locus-tag class description JHS88_00005 IPR003593 AAA+ ATPase domain JHS88_00005 IPR001957 Chromosomal replication control, initiator DnaA JHS88_00005 IPR020591 Chromosomal replication control, initiator DnaA-like JHS88_00005 IPR018312 Chromosomal replication control, initiator DnaA, conserved site JHS88_00005 IPR013317 Chromosomal replication initiator protein DnaA JHS88_00005 IPR013159 Chromosomal replication initiator, DnaA C-terminal JHS88_00005 IPR024633 DnaA N-terminal domain JHS88_00005 IPR038454 DnaA, N-terminal domain superfamily JHS88_00005 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_00005 IPR010921 Trp repressor/replication initiator JHS88_00010 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal JHS88_00010 IPR022637 DNA polymerase III, beta sliding clamp, central JHS88_00010 IPR001001 DNA polymerase III, beta sliding clamp JHS88_00010 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal JHS88_00015 IPR001238 DNA-binding, RecF JHS88_00015 IPR018078 DNA-binding, RecF, conserved site JHS88_00015 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_00015 IPR003395 RecF/RecN/SMC, N-terminal JHS88_00015 IPR042174 DNA-binding RecF, domain 2 JHS88_00020 IPR013760 DNA topoisomerase, type IIA-like domain superfamily JHS88_00020 IPR034160 DNA gyrase subunit B, TOPRIM domain JHS88_00020 IPR006171 TOPRIM domain JHS88_00020 IPR018522 DNA topoisomerase, type IIA, conserved site JHS88_00020 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 JHS88_00020 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal JHS88_00020 IPR001241 DNA topoisomerase, type IIA JHS88_00020 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_00020 IPR020568 Ribosomal protein S5 domain 2-type fold JHS88_00020 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_00020 IPR041423 DNA gyrase subunit B insert domain JHS88_00020 IPR011557 DNA gyrase, subunit B JHS88_00020 IPR002288 DNA gyrase B subunit, C-terminal JHS88_00020 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JHS88_00030 IPR002068 Alpha crystallin/Hsp20 domain JHS88_00030 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain JHS88_00030 IPR008978 HSP20-like chaperone JHS88_00030 IPR023728 Small heat shock protein IbpA JHS88_00035 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JHS88_00035 IPR004839 Aminotransferase, class I/classII JHS88_00035 IPR015424 Pyridoxal phosphate-dependent transferase JHS88_00040 IPR014635 Alpha-amylase, MalS type JHS88_00040 IPR006047 Glycosyl hydrolase, family 13, catalytic domain JHS88_00040 IPR017853 Glycoside hydrolase superfamily JHS88_00045 IPR008909 DALR anticodon binding JHS88_00045 IPR006194 Glycine-tRNA synthetase, heterodimeric JHS88_00045 IPR015944 Glycine-tRNA ligase, beta subunit JHS88_00050 IPR002310 Glycine-tRNA ligase, alpha subunit JHS88_00050 IPR006194 Glycine-tRNA synthetase, heterodimeric JHS88_00055 IPR001727 Gdt1 family JHS88_00065 IPR022931 Sulfur carrier protein TusA JHS88_00065 IPR001455 TusA-like domain JHS88_00065 IPR036868 TusA-like domain superfamily JHS88_00075 IPR036390 Winged helix DNA-binding domain superfamily JHS88_00075 IPR005119 LysR, substrate-binding JHS88_00075 IPR000847 Transcription regulator HTH, LysR JHS88_00075 IPR023746 Transcription regulator HTH, YidZ JHS88_00075 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_00075 IPR037402 HTH-type transcriptional regulator YidZ, PBP2 domain JHS88_00080 IPR013149 Alcohol dehydrogenase, C-terminal JHS88_00080 IPR014188 Acrylyl-CoA reductase AcuI JHS88_00080 IPR020843 Polyketide synthase, enoylreductase domain JHS88_00080 IPR036291 NAD(P)-binding domain superfamily JHS88_00080 IPR013154 Alcohol dehydrogenase, N-terminal JHS88_00080 IPR011032 GroES-like superfamily JHS88_00085 IPR020610 Thiolase, active site JHS88_00085 IPR016039 Thiolase-like JHS88_00085 IPR002155 Thiolase JHS88_00085 IPR012805 Acetyl-CoA C-acyltransferase FadA JHS88_00085 IPR020613 Thiolase, conserved site JHS88_00085 IPR020616 Thiolase, N-terminal JHS88_00085 IPR020617 Thiolase, C-terminal JHS88_00085 IPR020615 Thiolase, acyl-enzyme intermediate active site JHS88_00090 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding JHS88_00090 IPR036291 NAD(P)-binding domain superfamily JHS88_00090 IPR012799 Fatty oxidation complex, alpha subunit FadB JHS88_00090 IPR001753 Enoyl-CoA hydratase/isomerase JHS88_00090 IPR029045 ClpP/crotonase-like domain superfamily JHS88_00090 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily JHS88_00090 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site JHS88_00090 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal JHS88_00095 IPR015796 Impact family, bacterial/archaeal JHS88_00095 IPR023582 Impact family JHS88_00095 IPR035647 EF-G domain III/V-like JHS88_00095 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal JHS88_00095 IPR020568 Ribosomal protein S5 domain 2-type fold JHS88_00095 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site JHS88_00095 IPR001498 Impact, N-terminal JHS88_00095 IPR036956 Impact, N-terminal domain superfamily JHS88_00100 IPR004772 TrkH potassium transport family JHS88_00100 IPR003445 Cation transporter JHS88_00105 IPR026816 Flavodoxin domain JHS88_00105 IPR029039 Flavoprotein-like superfamily JHS88_00105 IPR001226 Flavodoxin, conserved site JHS88_00105 IPR008254 Flavodoxin/nitric oxide synthase JHS88_00140 IPR037404 HTH-type transcriptional activator IlvY, PBP2 domain JHS88_00140 IPR005119 LysR, substrate-binding JHS88_00140 IPR000847 Transcription regulator HTH, LysR JHS88_00140 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_00140 IPR036390 Winged helix DNA-binding domain superfamily JHS88_00145 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily JHS88_00145 IPR013328 6-phosphogluconate dehydrogenase, domain 2 JHS88_00145 IPR036291 NAD(P)-binding domain superfamily JHS88_00145 IPR013023 Ketol-acid reductoisomerase JHS88_00145 IPR013116 Ketol-acid reductoisomerase, N-terminal JHS88_00145 IPR000506 Ketol-acid reductoisomerase, C-terminal JHS88_00150 IPR007475 Ubiquinone biosynthesis accessory factor UbiK JHS88_00155 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JHS88_00155 IPR001036 Acriflavin resistance protein JHS88_00160 IPR006143 RND efflux pump, membrane fusion protein JHS88_00160 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain JHS88_00165 IPR001647 DNA-binding HTH domain, TetR-type JHS88_00165 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JHS88_00165 IPR009057 Homeobox-like domain superfamily JHS88_00165 IPR023772 DNA-binding HTH domain, TetR-type, conserved site JHS88_00165 IPR032551 HTH-type transcriptional repressor, C-terminal JHS88_00170 IPR014017 UvrD-like DNA helicase, C-terminal JHS88_00170 IPR000212 DNA helicase, UvrD/REP type JHS88_00170 IPR005752 ATP-dependent DNA helicase Rep JHS88_00170 IPR014016 UvrD-like helicase, ATP-binding domain JHS88_00170 IPR013986 DExx box DNA helicase domain superfamily JHS88_00170 IPR034739 UvrD/AddA helicase, N-terminal JHS88_00170 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_00175 IPR009056 Cytochrome c-like domain JHS88_00175 IPR036909 Cytochrome c-like domain superfamily JHS88_00175 IPR002323 Cytochrome c, class IE JHS88_00205 IPR036412 HAD-like superfamily JHS88_00205 IPR006439 HAD hydrolase, subfamily IA JHS88_00205 IPR006549 HAD-superfamily hydrolase,subfamily IIIA JHS88_00205 IPR041492 Haloacid dehalogenase-like hydrolase JHS88_00205 IPR023733 Pyrophosphatase PpaX JHS88_00205 IPR023198 Phosphoglycolate phosphatase-like, domain 2 JHS88_00205 IPR023214 HAD superfamily JHS88_00210 IPR003593 AAA+ ATPase domain JHS88_00210 IPR017871 ABC transporter, conserved site JHS88_00210 IPR003439 ABC transporter-like JHS88_00210 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal JHS88_00210 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_00215 IPR030678 Peptide/nickel binding protein, MppA-type JHS88_00215 IPR039424 Solute-binding protein family 5 JHS88_00215 IPR023765 Solute-binding protein family 5, conserved site JHS88_00215 IPR000914 Solute-binding protein family 5 domain JHS88_00220 IPR035906 MetI-like superfamily JHS88_00220 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JHS88_00225 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JHS88_00225 IPR035906 MetI-like superfamily JHS88_00225 IPR025966 Oligopeptide transport permease C-like, N-terminal domain JHS88_00255 IPR000719 Protein kinase domain JHS88_00255 IPR017441 Protein kinase, ATP binding site JHS88_00255 IPR008271 Serine/threonine-protein kinase, active site JHS88_00255 IPR011009 Protein kinase-like domain superfamily JHS88_00260 IPR028082 Periplasmic binding protein-like I JHS88_00260 IPR001761 Periplasmic binding protein/LacI sugar binding domain JHS88_00260 IPR010982 Lambda repressor-like, DNA-binding domain superfamily JHS88_00260 IPR000843 LacI-type HTH domain JHS88_00265 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_00265 IPR000847 Transcription regulator HTH, LysR JHS88_00265 IPR005119 LysR, substrate-binding JHS88_00265 IPR036390 Winged helix DNA-binding domain superfamily JHS88_00270 IPR023740 Spermidine export protein MdtJ JHS88_00270 IPR000390 Small multidrug resistance protein family JHS88_00275 IPR000390 Small multidrug resistance protein family JHS88_00275 IPR023737 Spermidine export protein MdtI JHS88_00280 IPR004786 6-phosphogluconate dehydratase JHS88_00280 IPR042096 Dihydroxy-acid dehydratase, C-terminal JHS88_00280 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site JHS88_00280 IPR037237 IlvD/EDD, N-terminal domain JHS88_00280 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase JHS88_00285 IPR031322 Shikimate kinase/gluconokinase JHS88_00285 IPR006001 Carbohydrate kinase, thermoresistant glucokinase JHS88_00285 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_00290 IPR003474 Gluconate transporter JHS88_00295 IPR000887 KDPG/KHG aldolase JHS88_00295 IPR013785 Aldolase-type TIM barrel JHS88_00295 IPR031337 KDPG/KHG aldolase, active site 1 JHS88_00295 IPR031338 KDPG/KHG aldolase, active site 2 JHS88_00300 IPR011268 Purine nucleoside phosphorylase JHS88_00300 IPR010943 Xanthosine phosphorylase JHS88_00300 IPR035994 Nucleoside phosphorylase superfamily JHS88_00300 IPR018099 Purine phosphorylase, family 2, conserved site JHS88_00300 IPR000845 Nucleoside phosphorylase domain JHS88_00305 IPR005119 LysR, substrate-binding JHS88_00305 IPR000847 Transcription regulator HTH, LysR JHS88_00305 IPR037411 HTH-type transcriptional regulator AlsR, PBP2 domain JHS88_00305 IPR036390 Winged helix DNA-binding domain superfamily JHS88_00305 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_00310 IPR006322 Glutathione reductase, eukaryote/bacterial JHS88_00310 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site JHS88_00310 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JHS88_00310 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I JHS88_00310 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily JHS88_00310 IPR023753 FAD/NAD(P)-binding domain JHS88_00310 IPR036188 FAD/NAD(P)-binding domain superfamily JHS88_00315 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_00315 IPR007473 Ribosomal RNA large subunit methyltransferase J JHS88_00315 IPR002052 DNA methylase, N-6 adenine-specific, conserved site JHS88_00320 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 JHS88_00320 IPR001567 Peptidase M3A/M3B catalytic domain JHS88_00325 IPR000485 AsnC-type HTH domain JHS88_00325 IPR011008 Dimeric alpha-beta barrel JHS88_00325 IPR011991 ArsR-like helix-turn-helix domain JHS88_00325 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain JHS88_00325 IPR019885 Transcription regulator HTH, AsnC-type, conserved site JHS88_00325 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_00325 IPR036390 Winged helix DNA-binding domain superfamily JHS88_00325 IPR019888 Transcription regulator AsnC-type JHS88_00330 IPR035965 PAS domain superfamily JHS88_00330 IPR000014 PAS domain JHS88_00330 IPR029787 Nucleotide cyclase JHS88_00330 IPR013656 PAS fold-4 JHS88_00330 IPR035919 EAL domain superfamily JHS88_00330 IPR001633 EAL domain JHS88_00330 IPR000160 GGDEF domain JHS88_00335 IPR007536 Ribosomal RNA small subunit methyltransferase J JHS88_00335 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_00345 IPR000620 EamA domain JHS88_00345 IPR004779 Carboxylate/Amino Acid/Amine Transporter JHS88_00350 IPR006016 UspA JHS88_00350 IPR006015 Universal stress protein A family JHS88_00350 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JHS88_00355 IPR008331 Ferritin/DPS protein domain JHS88_00355 IPR009078 Ferritin-like superfamily JHS88_00355 IPR009040 Ferritin-like diiron domain JHS88_00355 IPR012347 Ferritin-like JHS88_00355 IPR001519 Ferritin JHS88_00355 IPR041719 Ferritin, prokaryotic-type JHS88_00360 IPR019598 Universal stress protein B JHS88_00365 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like JHS88_00365 IPR023166 HI0933-like insert domain superfamily JHS88_00365 IPR036188 FAD/NAD(P)-binding domain superfamily JHS88_00370 IPR003593 AAA+ ATPase domain JHS88_00370 IPR003018 GAF domain JHS88_00370 IPR009057 Homeobox-like domain superfamily JHS88_00370 IPR002197 DNA binding HTH domain, Fis-type JHS88_00370 IPR029016 GAF-like domain superfamily JHS88_00370 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 JHS88_00370 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JHS88_00370 IPR025944 Sigma-54 interaction domain, conserved site JHS88_00370 IPR002078 RNA polymerase sigma factor 54 interaction domain JHS88_00370 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_00375 IPR007055 BON domain JHS88_00375 IPR014004 Transport-associated and nodulation domain, bacteria JHS88_00395 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily JHS88_00395 IPR001206 Diacylglycerol kinase, catalytic domain JHS88_00395 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal JHS88_00395 IPR005218 Diacylglycerol/lipid kinase JHS88_00425 IPR002549 Transmembrane protein TqsA-like JHS88_00430 IPR001633 EAL domain JHS88_00430 IPR035919 EAL domain superfamily JHS88_00430 IPR000160 GGDEF domain JHS88_00430 IPR005330 MHYT domain JHS88_00430 IPR029787 Nucleotide cyclase JHS88_00440 IPR003798 DNA recombination RmuC JHS88_00445 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_00445 IPR004033 UbiE/COQ5 methyltransferase JHS88_00445 IPR023576 UbiE/COQ5 methyltransferase, conserved site JHS88_00450 IPR003033 SCP2 sterol-binding domain JHS88_00450 IPR036527 SCP2 sterol-binding domain superfamily JHS88_00450 IPR038989 Ubiquinone biosynthesis protein UbiJ JHS88_00455 IPR004147 UbiB domain JHS88_00455 IPR010232 Probable protein kinase UbiB JHS88_00455 IPR011009 Protein kinase-like domain superfamily JHS88_00460 IPR003369 Sec-independent protein translocase protein TatA/B/E JHS88_00460 IPR006312 Sec-independent protein translocase protein TatA/E JHS88_00465 IPR003369 Sec-independent protein translocase protein TatA/B/E JHS88_00465 IPR018448 Twin-arginine translocation protein TatB JHS88_00470 IPR019820 Sec-independent periplasmic protein translocase, conserved site JHS88_00470 IPR002033 Sec-independent periplasmic protein translocase TatC JHS88_00475 IPR032466 Metal-dependent hydrolase JHS88_00475 IPR015991 Uncharacterised hydrolase TatD-type JHS88_00475 IPR001130 TatD family JHS88_00475 IPR018228 Deoxyribonuclease, TatD-related, conserved site JHS88_00480 IPR030656 Delta-aminolevulinic acid dehydratase, active site JHS88_00480 IPR013785 Aldolase-type TIM barrel JHS88_00480 IPR001731 Delta-aminolevulinic acid dehydratase JHS88_00495 IPR002562 3'-5' exonuclease domain JHS88_00495 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal JHS88_00495 IPR002421 5'-3' exonuclease, N-terminal JHS88_00495 IPR036279 5'-3' exonuclease, C-terminal domain superfamily JHS88_00495 IPR019760 DNA-directed DNA polymerase, family A, conserved site JHS88_00495 IPR001098 DNA-directed DNA polymerase, family A, palm domain JHS88_00495 IPR020045 DNA polymerase I-like, H3TH domain JHS88_00495 IPR018320 DNA polymerase 1 JHS88_00495 IPR002298 DNA polymerase A JHS88_00495 IPR008918 Helix-hairpin-helix motif, class 2 JHS88_00495 IPR036397 Ribonuclease H superfamily JHS88_00495 IPR012337 Ribonuclease H-like superfamily JHS88_00495 IPR029060 PIN-like domain superfamily JHS88_00500 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC JHS88_00500 IPR006073 GTP binding domain JHS88_00500 IPR030393 EngB-type guanine nucleotide-binding (G) domain JHS88_00500 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_00505 IPR024167 Cytochrome c4-like JHS88_00505 IPR036909 Cytochrome c-like domain superfamily JHS88_00505 IPR009056 Cytochrome c-like domain JHS88_00515 IPR007336 Der GTPase activator JHS88_00520 IPR019617 Domain of unknown function DUF2489 JHS88_00525 IPR007197 Radical SAM JHS88_00525 IPR010723 HemN, C-terminal JHS88_00525 IPR006638 Elp3/MiaB/NifB JHS88_00525 IPR034505 Anaerobic coproporphyrinogen-III oxidase JHS88_00525 IPR023404 Radical SAM, alpha/beta horseshoe JHS88_00525 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN JHS88_00530 IPR032466 Metal-dependent hydrolase JHS88_00530 IPR006330 Adenosine/adenine deaminase JHS88_00530 IPR001365 Adenosine/AMP deaminase domain JHS88_00530 IPR028893 Adenosine deaminase JHS88_00535 IPR001633 EAL domain JHS88_00535 IPR005330 MHYT domain JHS88_00535 IPR000160 GGDEF domain JHS88_00535 IPR035919 EAL domain superfamily JHS88_00535 IPR029787 Nucleotide cyclase JHS88_00540 IPR003593 AAA+ ATPase domain JHS88_00540 IPR009057 Homeobox-like domain superfamily JHS88_00540 IPR002197 DNA binding HTH domain, Fis-type JHS88_00540 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_00540 IPR001789 Signal transduction response regulator, receiver domain JHS88_00540 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 JHS88_00540 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JHS88_00540 IPR025944 Sigma-54 interaction domain, conserved site JHS88_00540 IPR010114 DNA-binding transcriptional regulator NtrC JHS88_00540 IPR011006 CheY-like superfamily JHS88_00540 IPR002078 RNA polymerase sigma factor 54 interaction domain JHS88_00545 IPR013767 PAS fold JHS88_00545 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_00545 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_00545 IPR005467 Histidine kinase domain JHS88_00545 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JHS88_00545 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JHS88_00545 IPR000014 PAS domain JHS88_00545 IPR035965 PAS domain superfamily JHS88_00545 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JHS88_00555 IPR004809 Glutamine synthetase type I JHS88_00555 IPR027303 Glutamine synthetase, glycine-rich site JHS88_00555 IPR008146 Glutamine synthetase, catalytic domain JHS88_00555 IPR027302 Glutamine synthetase, N-terminal conserved site JHS88_00555 IPR036651 Glutamine synthetase, N-terminal domain superfamily JHS88_00555 IPR008147 Glutamine synthetase, beta-Grasp domain JHS88_00555 IPR001637 Glutamine synthetase class-I, adenylation site JHS88_00555 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain JHS88_00560 IPR000640 Elongation factor EFG, domain V-like JHS88_00560 IPR035651 BipA, domain V JHS88_00560 IPR006298 GTP-binding protein TypA JHS88_00560 IPR035647 EF-G domain III/V-like JHS88_00560 IPR009000 Translation protein, beta-barrel domain superfamily JHS88_00560 IPR000795 Transcription factor, GTP-binding domain JHS88_00560 IPR005225 Small GTP-binding protein domain JHS88_00560 IPR042116 GTP-binding protein TypA/BipA, C-terminal JHS88_00560 IPR031157 Tr-type G domain, conserved site JHS88_00560 IPR004161 Translation elongation factor EFTu-like, domain 2 JHS88_00560 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_00575 IPR023679 Uncharacterised protein family UPF0761, bacterial JHS88_00575 IPR017039 Virulence factor BrkB JHS88_00580 IPR003732 D-aminoacyl-tRNA deacylase DTD JHS88_00580 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily JHS88_00585 IPR000182 GNAT domain JHS88_00585 IPR012660 Thioesterase, putative JHS88_00585 IPR016181 Acyl-CoA N-acyltransferase JHS88_00585 IPR029069 HotDog domain superfamily JHS88_00595 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site JHS88_00595 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal JHS88_00595 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising JHS88_00595 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal JHS88_00600 IPR000397 Heat shock protein Hsp33 JHS88_00600 IPR016154 Heat shock protein Hsp33, C-terminal JHS88_00600 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily JHS88_00600 IPR016153 Heat shock protein Hsp33, N-terminal JHS88_00605 IPR036986 RNA-binding S4 domain superfamily JHS88_00605 IPR025708 Heat shock protein 15 JHS88_00605 IPR002942 RNA-binding S4 domain JHS88_00610 IPR024961 Type II secretion system protein C, N-terminal JHS88_00610 IPR036034 PDZ superfamily JHS88_00610 IPR001639 Type II secretion system protein C JHS88_00615 IPR005644 NolW-like JHS88_00615 IPR038591 NolW-like superfamily JHS88_00615 IPR004846 Type II/III secretion system JHS88_00615 IPR013356 Type II secretion system GspD JHS88_00615 IPR004845 Type II secretion system GspD, conserved site JHS88_00615 IPR001775 GspD/PilQ family JHS88_00620 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_00620 IPR001482 Type II/IV secretion system protein JHS88_00620 IPR037257 General secretory system II, protein E, N-terminal superfamily JHS88_00620 IPR013369 Type II secretion system GspE JHS88_00620 IPR042181 Type II secretion system, protein E, N-terminal JHS88_00620 IPR003593 AAA+ ATPase domain JHS88_00625 IPR042094 Type II secretion system F domain superfamily JHS88_00625 IPR001992 Type II secretion system conserved site JHS88_00625 IPR011850 General secretion pathway protein F JHS88_00625 IPR003004 GspF/PilC family JHS88_00625 IPR018076 Type II secretion system F domain JHS88_00630 IPR010054 General secretion pathway protein G JHS88_00630 IPR000983 Bacterial general secretion pathway protein G-type pilin JHS88_00630 IPR012902 Prokaryotic N-terminal methylation site JHS88_00630 IPR013545 Type II secretion system protein G JHS88_00635 IPR012902 Prokaryotic N-terminal methylation site JHS88_00635 IPR022346 General secretion pathway, GspH JHS88_00635 IPR002416 Type II secretion system protein H JHS88_00640 IPR010052 Type II secretion system protein I JHS88_00640 IPR003413 Type II secretion system protein I domain JHS88_00640 IPR012902 Prokaryotic N-terminal methylation site JHS88_00645 IPR012902 Prokaryotic N-terminal methylation site JHS88_00645 IPR010055 Type II secretion system protein J JHS88_00650 IPR005628 General secretion pathway protein K JHS88_00650 IPR038072 GspK, central domain superfamily JHS88_00655 IPR024230 GspL, cytoplasmic actin-ATPase-like domain JHS88_00655 IPR025691 GspL periplasmic domain JHS88_00655 IPR007812 Type II secretion system protein L JHS88_00660 IPR007690 Type II secretion system, protein M JHS88_00660 IPR023229 Type II secretion system protein M, periplasmic domain superfamily JHS88_00665 IPR000645 Type II secretion system protein N, conserved site JHS88_00665 IPR022792 Type II secretion system, protein N JHS88_00670 IPR020583 Inositol monophosphatase, metal-binding site JHS88_00670 IPR000760 Inositol monophosphatase-like JHS88_00670 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ JHS88_00670 IPR020550 Inositol monophosphatase, conserved site JHS88_00675 IPR015797 NUDIX hydrolase-like domain superfamily JHS88_00675 IPR020084 NUDIX hydrolase, conserved site JHS88_00675 IPR000086 NUDIX hydrolase domain JHS88_00680 IPR035903 HesB-like domain superfamily JHS88_00680 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal JHS88_00680 IPR000361 FeS cluster biogenesis JHS88_00680 IPR017726 Fe/S biogenesis protein NfuA JHS88_00680 IPR034904 Fe-S cluster assembly domain superfamily JHS88_00685 IPR005222 Competence protein ComF JHS88_00685 IPR029057 Phosphoribosyltransferase-like JHS88_00685 IPR000836 Phosphoribosyltransferase domain JHS88_00690 IPR029058 Alpha/Beta hydrolase fold JHS88_00690 IPR000073 Alpha/beta hydrolase fold-1 JHS88_00690 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase JHS88_00700 IPR022967 RNA-binding domain, S1 JHS88_00700 IPR041692 HHH domain 9 JHS88_00700 IPR012340 Nucleic acid-binding, OB-fold JHS88_00700 IPR012337 Ribonuclease H-like superfamily JHS88_00700 IPR010994 RuvA domain 2-like JHS88_00700 IPR023323 Tex-like domain superfamily JHS88_00700 IPR023319 Tex-like protein, HTH domain superfamily JHS88_00700 IPR018974 Tex-like protein, N-terminal JHS88_00700 IPR032639 Tex protein, YqgF-like domain JHS88_00700 IPR006641 YqgF/RNase H-like domain JHS88_00700 IPR037027 YqgF/RNase H-like domain superfamily JHS88_00700 IPR003029 S1 domain JHS88_00710 IPR006358 Transcription elongation factor GreB JHS88_00710 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal JHS88_00710 IPR023459 Transcription elongation factor GreA/GreB family JHS88_00710 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily JHS88_00710 IPR028624 Transcription elongation factor GreA/GreB JHS88_00710 IPR018151 Transcription elongation factor, GreA/GreB, conserved site JHS88_00710 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily JHS88_00710 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal JHS88_00720 IPR011006 CheY-like superfamily JHS88_00720 IPR001867 OmpR/PhoB-type DNA-binding domain JHS88_00720 IPR016032 Signal transduction response regulator, C-terminal effector JHS88_00720 IPR001789 Signal transduction response regulator, receiver domain JHS88_00720 IPR039420 Transcriptional regulatory protein WalR-like JHS88_00720 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_00725 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JHS88_00725 IPR005467 Histidine kinase domain JHS88_00725 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_00725 IPR003660 HAMP domain JHS88_00725 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JHS88_00725 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JHS88_00725 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_00730 IPR006042 Xanthine/uracil permease JHS88_00730 IPR006043 Xanthine/uracil/vitamin C permease JHS88_00735 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_00735 IPR012340 Nucleic acid-binding, OB-fold JHS88_00735 IPR033454 RecG, wedge domain JHS88_00735 IPR014001 Helicase superfamily 1/2, ATP-binding domain JHS88_00735 IPR011545 DEAD/DEAH box helicase domain JHS88_00735 IPR004609 ATP-dependent DNA helicase RecG JHS88_00735 IPR001650 Helicase, C-terminal JHS88_00740 IPR029028 Alpha/beta knot methyltransferases JHS88_00740 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal JHS88_00740 IPR001537 tRNA/rRNA methyltransferase, SpoU type JHS88_00740 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase JHS88_00740 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JHS88_00745 IPR004095 TGS JHS88_00745 IPR007685 RelA/SpoT JHS88_00745 IPR004811 RelA/SpoT family JHS88_00745 IPR012676 TGS-like JHS88_00745 IPR033655 RelA, TGS domain JHS88_00745 IPR003607 HD/PDEase domain JHS88_00745 IPR012675 Beta-grasp domain superfamily JHS88_00745 IPR002912 ACT domain JHS88_00750 IPR036161 RPB6/omega subunit-like superfamily JHS88_00750 IPR003716 DNA-directed RNA polymerase, omega subunit JHS88_00750 IPR006110 RNA polymerase, subunit omega/K/RPB6 JHS88_00750 IPR012293 RNA polymerase subunit, RPB6/omega JHS88_00755 IPR008144 Guanylate kinase-like domain JHS88_00755 IPR017665 Guanylate kinase JHS88_00755 IPR020590 Guanylate kinase, conserved site JHS88_00755 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_00755 IPR008145 Guanylate kinase/L-type calcium channel beta subunit JHS88_00775 IPR003400 Biopolymer transport protein ExbD/TolR JHS88_00780 IPR002898 MotA/TolQ/ExbB proton channel JHS88_00795 IPR010101 TonB-dependent vitamin B12 transporter BtuB JHS88_00795 IPR012910 TonB-dependent receptor, plug domain JHS88_00795 IPR000531 TonB-dependent receptor-like, beta-barrel JHS88_00795 IPR010916 TonB box, conserved site JHS88_00795 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily JHS88_00795 IPR010917 TonB-dependent receptor, conserved site JHS88_00795 IPR039426 Vitamin B12 transporter BtuB-like JHS88_00795 IPR037066 TonB-dependent receptor, plug domain superfamily JHS88_00800 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JHS88_00800 IPR035906 MetI-like superfamily JHS88_00810 IPR000914 Solute-binding protein family 5 domain JHS88_00810 IPR023765 Solute-binding protein family 5, conserved site JHS88_00810 IPR030678 Peptide/nickel binding protein, MppA-type JHS88_00810 IPR039424 Solute-binding protein family 5 JHS88_00815 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal JHS88_00815 IPR017871 ABC transporter, conserved site JHS88_00815 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_00815 IPR003439 ABC transporter-like JHS88_00815 IPR003593 AAA+ ATPase domain JHS88_00820 IPR003593 AAA+ ATPase domain JHS88_00820 IPR003439 ABC transporter-like JHS88_00820 IPR017871 ABC transporter, conserved site JHS88_00820 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal JHS88_00820 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_00830 IPR005229 Conserved hypothetical protein CHP00255 JHS88_00830 IPR013551 Domain of unknown function DUF1732 JHS88_00830 IPR013527 YicC-like, N-terminal JHS88_00835 IPR020568 Ribosomal protein S5 domain 2-type fold JHS88_00835 IPR001247 Exoribonuclease, phosphorolytic domain 1 JHS88_00835 IPR015847 Exoribonuclease, phosphorolytic domain 2 JHS88_00835 IPR036345 Exoribonuclease, PH domain 2 superfamily JHS88_00835 IPR027408 PNPase/RNase PH domain superfamily JHS88_00835 IPR002381 Ribonuclease PH, bacterial-type JHS88_00835 IPR018336 Ribonuclease PH, conserved site JHS88_00840 IPR023031 Orotate phosphoribosyltransferase JHS88_00840 IPR004467 Orotate phosphoribosyl transferase domain JHS88_00840 IPR000836 Phosphoribosyltransferase domain JHS88_00840 IPR029057 Phosphoribosyltransferase-like JHS88_00845 IPR004960 Bacterial lipid A biosynthesis acyltransferase JHS88_00845 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase JHS88_00850 IPR023769 Nucleoid occlusion factor SlmA JHS88_00850 IPR009057 Homeobox-like domain superfamily JHS88_00850 IPR001647 DNA-binding HTH domain, TetR-type JHS88_00850 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JHS88_00855 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal JHS88_00855 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC JHS88_00855 IPR003382 Flavoprotein JHS88_00855 IPR035929 CoaB-like superfamily JHS88_00855 IPR036551 Flavin prenyltransferase-like JHS88_00860 IPR004090 Chemotaxis methyl-accepting receptor JHS88_00860 IPR003660 HAMP domain JHS88_00860 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JHS88_00860 IPR033480 Single Cache domain 2 JHS88_00865 IPR001405 Uncharacterised protein family UPF0758 JHS88_00865 IPR025657 RadC-like JAB domain JHS88_00865 IPR037518 MPN domain JHS88_00865 IPR010994 RuvA domain 2-like JHS88_00865 IPR020891 Uncharacterised protein family UPF0758, conserved site JHS88_00870 IPR001383 Ribosomal protein L28 JHS88_00870 IPR037147 Ribosomal protein L28/L24 superfamily JHS88_00870 IPR034704 L28p-like JHS88_00870 IPR026569 Ribosomal protein L28/L24 JHS88_00875 IPR001705 Ribosomal protein L33 JHS88_00875 IPR011332 Zinc-binding ribosomal protein JHS88_00875 IPR018264 Ribosomal protein L33, conserved site JHS88_00875 IPR038584 Ribosomal protein L33 superfamily JHS88_00880 IPR000917 Sulfatase, N-terminal JHS88_00880 IPR040423 Phosphoethanolamine transferase JHS88_00880 IPR017850 Alkaline-phosphatase-like, core domain superfamily JHS88_00890 IPR010979 Ribosomal protein S13-like, H2TH JHS88_00890 IPR035937 MutM-like, N-terminal JHS88_00890 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain JHS88_00890 IPR020629 Formamidopyrimidine-DNA glycosylase JHS88_00890 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site JHS88_00890 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding JHS88_00890 IPR010663 Zinc finger, FPG/IleRS-type JHS88_00890 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type JHS88_00895 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JHS88_00895 IPR004821 Cytidyltransferase-like domain JHS88_00895 IPR001980 Phosphopantetheine adenylyltransferase JHS88_00900 IPR006598 Glycosyl transferase CAP10 domain JHS88_00905 IPR029044 Nucleotide-diphospho-sugar transferases JHS88_00905 IPR001173 Glycosyltransferase 2-like JHS88_00910 IPR001173 Glycosyltransferase 2-like JHS88_00910 IPR029044 Nucleotide-diphospho-sugar transferases JHS88_00915 IPR002201 Glycosyl transferase, family 9 JHS88_00920 IPR033718 Diacylglycerol kinase, prokaryotic JHS88_00920 IPR000829 DAGK family JHS88_00920 IPR036945 Diacylglycerol kinase (DAGK) superfamily JHS88_00925 IPR022826 3-deoxy-D-manno-octulosonic acid kinase JHS88_00925 IPR011009 Protein kinase-like domain superfamily JHS88_00925 IPR000719 Protein kinase domain JHS88_00930 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_00930 IPR036291 NAD(P)-binding domain superfamily JHS88_00930 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain JHS88_00935 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JHS88_00935 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JHS88_00935 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase JHS88_00935 IPR015424 Pyridoxal phosphate-dependent transferase JHS88_00940 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like JHS88_00940 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain JHS88_00940 IPR020004 UDP-N-acetylglucosamine 2-epimerase,UDP-hydrolysing JHS88_00945 IPR013132 N-acetylneuraminic acid synthase, N-terminal JHS88_00945 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily JHS88_00945 IPR013785 Aldolase-type TIM barrel JHS88_00945 IPR020007 N-acetylneuraminate synthase JHS88_00945 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal JHS88_00945 IPR013974 SAF domain JHS88_00955 IPR005835 Nucleotidyl transferase domain JHS88_00955 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial JHS88_00955 IPR005836 ADP-glucose pyrophosphorylase, conserved site JHS88_00955 IPR011831 Glucose-1-phosphate adenylyltransferase JHS88_00955 IPR011004 Trimeric LpxA-like superfamily JHS88_00955 IPR029044 Nucleotide-diphospho-sugar transferases JHS88_00960 IPR036514 SGNH hydrolase superfamily JHS88_00960 IPR029044 Nucleotide-diphospho-sugar transferases JHS88_00960 IPR013830 SGNH hydrolase-type esterase domain JHS88_00960 IPR003329 Acylneuraminate cytidylyltransferase JHS88_00970 IPR015424 Pyridoxal phosphate-dependent transferase JHS88_00970 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JHS88_00970 IPR005814 Aminotransferase class-III JHS88_00970 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JHS88_00975 IPR003010 Carbon-nitrogen hydrolase JHS88_00975 IPR036526 Carbon-nitrogen hydrolase superfamily JHS88_00975 IPR001110 Uncharacterised protein family UPF0012, conserved site JHS88_00980 IPR002347 Short-chain dehydrogenase/reductase SDR JHS88_00980 IPR036291 NAD(P)-binding domain superfamily JHS88_01000 IPR039901 3-deoxy-D-manno-octulosonic acid transferase JHS88_01000 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily JHS88_01000 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal JHS88_01005 IPR011910 ADP-heptose--LPS heptosyltransferase 2 JHS88_01005 IPR002201 Glycosyl transferase, family 9 JHS88_01010 IPR011921 Lipid A biosynthesis myristoyltransferase JHS88_01010 IPR004960 Bacterial lipid A biosynthesis acyltransferase JHS88_01015 IPR036291 NAD(P)-binding domain superfamily JHS88_01015 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase JHS88_01015 IPR001509 NAD-dependent epimerase/dehydratase JHS88_01020 IPR010344 Exopolysaccharide biosynthesis protein YbjH JHS88_01055 IPR005888 dTDP-glucose 4,6-dehydratase JHS88_01055 IPR036291 NAD(P)-binding domain superfamily JHS88_01055 IPR016040 NAD(P)-binding domain JHS88_01060 IPR029044 Nucleotide-diphospho-sugar transferases JHS88_01060 IPR005835 Nucleotidyl transferase domain JHS88_01060 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form JHS88_01065 IPR029903 RmlD-like substrate binding domain JHS88_01065 IPR005913 dTDP-4-dehydrorhamnose reductase family JHS88_01065 IPR036291 NAD(P)-binding domain superfamily JHS88_01070 IPR011051 RmlC-like cupin domain superfamily JHS88_01070 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related JHS88_01070 IPR014710 RmlC-like jelly roll fold JHS88_01075 IPR016166 FAD-binding domain, PCMH-type JHS88_01075 IPR036318 FAD-binding, type PCMH-like superfamily JHS88_01075 IPR016167 FAD-binding, type PCMH, subdomain 1 JHS88_01075 IPR016169 FAD-binding, type PCMH, subdomain 2 JHS88_01075 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase JHS88_01075 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal JHS88_01075 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily JHS88_01075 IPR006094 FAD linked oxidase, N-terminal JHS88_01090 IPR002495 Glycosyl transferase, family 8 JHS88_01090 IPR029044 Nucleotide-diphospho-sugar transferases JHS88_01100 IPR001173 Glycosyltransferase 2-like JHS88_01100 IPR029044 Nucleotide-diphospho-sugar transferases JHS88_01100 IPR041038 TarS beta-glycosyltransferase C-terminal domain 1 JHS88_01105 IPR001296 Glycosyl transferase, family 1 JHS88_01105 IPR015397 Glycosyl transferase 1, domain A JHS88_01110 IPR029044 Nucleotide-diphospho-sugar transferases JHS88_01110 IPR001173 Glycosyltransferase 2-like JHS88_01115 IPR001451 Hexapeptide repeat JHS88_01115 IPR011004 Trimeric LpxA-like superfamily JHS88_01120 IPR029044 Nucleotide-diphospho-sugar transferases JHS88_01135 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase JHS88_01135 IPR000715 Glycosyl transferase, family 4 JHS88_01140 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily JHS88_01140 IPR036291 NAD(P)-binding domain superfamily JHS88_01140 IPR017476 UDP-glucose/GDP-mannose dehydrogenase JHS88_01140 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal JHS88_01140 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily JHS88_01140 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type JHS88_01140 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation JHS88_01140 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal JHS88_01145 IPR029044 Nucleotide-diphospho-sugar transferases JHS88_01145 IPR005835 Nucleotidyl transferase domain JHS88_01145 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type JHS88_01150 IPR022712 Beta-Casp domain JHS88_01150 IPR001279 Metallo-beta-lactamase JHS88_01150 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JHS88_01150 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain JHS88_01155 IPR020861 Triosephosphate isomerase, active site JHS88_01155 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic JHS88_01155 IPR035990 Triosephosphate isomerase superfamily JHS88_01155 IPR000652 Triosephosphate isomerase JHS88_01155 IPR013785 Aldolase-type TIM barrel JHS88_01175 IPR014036 DeoR C-terminal sensor domain JHS88_01175 IPR001034 DeoR-type HTH domain JHS88_01175 IPR037171 NagB/RpiA transferase-like JHS88_01175 IPR018356 Transcription regulator, HTH DeoR-type, conserved site JHS88_01175 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_01175 IPR036390 Winged helix DNA-binding domain superfamily JHS88_01180 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase JHS88_01185 IPR009252 Cell division protein ZapB JHS88_01190 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria JHS88_01190 IPR010203 Regulator of ribonuclease activity A JHS88_01190 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein JHS88_01190 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily JHS88_01195 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase JHS88_01195 IPR000537 UbiA prenyltransferase family JHS88_01195 IPR026046 UbiA prenyltransferase domain containing protein 1 JHS88_01200 IPR004491 Heat shock protein HslU JHS88_01200 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_01200 IPR003959 ATPase, AAA-type, core JHS88_01200 IPR019489 Clp ATPase, C-terminal JHS88_01200 IPR003593 AAA+ ATPase domain JHS88_01205 IPR001353 Proteasome, subunit alpha/beta JHS88_01205 IPR023333 Proteasome B-type subunit JHS88_01205 IPR022281 ATP-dependent protease, HslV subunit JHS88_01205 IPR029055 Nucleophile aminohydrolases, N-terminal JHS88_01215 IPR000843 LacI-type HTH domain JHS88_01215 IPR010982 Lambda repressor-like, DNA-binding domain superfamily JHS88_01215 IPR028082 Periplasmic binding protein-like I JHS88_01220 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain JHS88_01220 IPR041236 Primosomal protein N, C-terminal domain JHS88_01220 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily JHS88_01220 IPR005259 Primosomal protein N' JHS88_01220 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_01220 IPR014001 Helicase superfamily 1/2, ATP-binding domain JHS88_01220 IPR011545 DEAD/DEAH box helicase domain JHS88_01220 IPR041222 Primosomal protein N', 3' DNA-binding domain JHS88_01220 IPR001650 Helicase, C-terminal JHS88_01225 IPR034704 L28p-like JHS88_01225 IPR002150 Ribosomal protein L31 JHS88_01225 IPR042105 Ribosomal protein L31 superfamily JHS88_01225 IPR027491 Ribosomal protein L31 type A JHS88_01230 IPR001848 Ribosomal protein S10 JHS88_01230 IPR027486 Ribosomal protein S10 domain JHS88_01230 IPR036838 Ribosomal protein S10 domain superfamily JHS88_01230 IPR018268 Ribosomal protein S10, conserved site JHS88_01235 IPR019927 Ribosomal protein L3, bacterial/organelle-type JHS88_01235 IPR019926 Ribosomal protein L3, conserved site JHS88_01235 IPR009000 Translation protein, beta-barrel domain superfamily JHS88_01235 IPR000597 Ribosomal protein L3 JHS88_01240 IPR002136 Ribosomal protein L4/L1e JHS88_01240 IPR023574 Ribosomal protein L4 domain superfamily JHS88_01240 IPR013005 50S ribosomal protein uL4 JHS88_01245 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily JHS88_01245 IPR012678 Ribosomal protein L23/L15e core domain superfamily JHS88_01245 IPR001014 Ribosomal protein L23/L25, conserved site JHS88_01245 IPR013025 Ribosomal protein L25/L23 JHS88_01250 IPR014722 Ribosomal protein L2, domain 2 JHS88_01250 IPR014726 Ribosomal protein L2, domain 3 JHS88_01250 IPR022671 Ribosomal protein L2, conserved site JHS88_01250 IPR022669 Ribosomal protein L2, C-terminal JHS88_01250 IPR005880 Ribosomal protein L2, bacterial/organellar-type JHS88_01250 IPR012340 Nucleic acid-binding, OB-fold JHS88_01250 IPR022666 Ribosomal Proteins L2, RNA binding domain JHS88_01250 IPR008991 Translation protein SH3-like domain superfamily JHS88_01250 IPR002171 Ribosomal protein L2 JHS88_01255 IPR020934 Ribosomal protein S19 conserved site JHS88_01255 IPR005732 Ribosomal protein S19, bacterial-type JHS88_01255 IPR023575 Ribosomal protein S19, superfamily JHS88_01255 IPR002222 Ribosomal protein S19/S15 JHS88_01260 IPR001063 Ribosomal protein L22/L17 JHS88_01260 IPR018260 Ribosomal protein L22/L17, conserved site JHS88_01260 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type JHS88_01260 IPR036394 Ribosomal protein L22/L17 superfamily JHS88_01265 IPR004087 K Homology domain JHS88_01265 IPR015946 K homology domain-like, alpha/beta JHS88_01265 IPR004044 K Homology domain, type 2 JHS88_01265 IPR009019 K homology domain superfamily, prokaryotic type JHS88_01265 IPR005704 Ribosomal protein S3, bacterial-type JHS88_01265 IPR001351 Ribosomal protein S3, C-terminal JHS88_01265 IPR036419 Ribosomal protein S3, C-terminal domain superfamily JHS88_01265 IPR018280 Ribosomal protein S3, conserved site JHS88_01270 IPR016180 Ribosomal protein L10e/L16 JHS88_01270 IPR036920 Ribosomal protein L10e/L16 superfamily JHS88_01270 IPR000114 Ribosomal protein L16 JHS88_01270 IPR020798 Ribosomal protein L16, conserved site JHS88_01275 IPR018254 Ribosomal protein L29, conserved site JHS88_01275 IPR036049 Ribosomal protein L29/L35 superfamily JHS88_01275 IPR001854 Ribosomal protein L29/L35 JHS88_01280 IPR012340 Nucleic acid-binding, OB-fold JHS88_01280 IPR019984 30S ribosomal protein S17 JHS88_01280 IPR000266 Ribosomal protein S17/S11 JHS88_01280 IPR019979 Ribosomal protein S17, conserved site JHS88_01285 IPR036853 Ribosomal protein L14 superfamily JHS88_01285 IPR019972 Ribosomal protein L14P, conserved site JHS88_01285 IPR005745 Ribosomal protein L14P, bacterial-type JHS88_01285 IPR000218 Ribosomal protein L14P JHS88_01290 IPR005824 KOW JHS88_01290 IPR014722 Ribosomal protein L2, domain 2 JHS88_01290 IPR003256 Ribosomal protein L24 JHS88_01290 IPR005825 Ribosomal protein L24/L26, conserved site JHS88_01290 IPR008991 Translation protein SH3-like domain superfamily JHS88_01290 IPR041988 Ribosomal Protein L26/L24, KOW domain JHS88_01295 IPR002132 Ribosomal protein L5 JHS88_01295 IPR020930 Ribosomal protein L5, bacterial-type JHS88_01295 IPR031309 Ribosomal protein L5, C-terminal JHS88_01295 IPR020929 Ribosomal protein L5, conserved site JHS88_01295 IPR022803 Ribosomal protein L5 domain superfamily JHS88_01295 IPR031310 Ribosomal protein L5, N-terminal JHS88_01300 IPR001209 Ribosomal protein S14 JHS88_01300 IPR023036 Ribosomal protein S14, bacterial/plastid JHS88_01300 IPR018271 Ribosomal protein S14, conserved site JHS88_01305 IPR000630 Ribosomal protein S8 JHS88_01305 IPR035987 Ribosomal protein S8 superfamily JHS88_01310 IPR002358 Ribosomal protein L6, conserved site JHS88_01310 IPR019906 Ribosomal protein L6, bacterial-type JHS88_01310 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily JHS88_01310 IPR020040 Ribosomal protein L6, alpha-beta domain JHS88_01310 IPR000702 Ribosomal protein L6 JHS88_01315 IPR005484 Ribosomal protein L18 JHS88_01315 IPR004389 Ribosomal protein L18, bacterial-type JHS88_01320 IPR000851 Ribosomal protein S5 JHS88_01320 IPR005712 Ribosomal protein S5, bacterial-type JHS88_01320 IPR005324 Ribosomal protein S5, C-terminal JHS88_01320 IPR020568 Ribosomal protein S5 domain 2-type fold JHS88_01320 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JHS88_01320 IPR013810 Ribosomal protein S5, N-terminal JHS88_01320 IPR018192 Ribosomal protein S5, N-terminal, conserved site JHS88_01325 IPR005996 Ribosomal protein L30, bacterial-type JHS88_01325 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain JHS88_01325 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily JHS88_01325 IPR018038 Ribosomal protein L30, conserved site JHS88_01330 IPR005749 Ribosomal protein L15, bacterial-type JHS88_01330 IPR021131 Ribosomal protein L18e/L15P JHS88_01330 IPR001196 Ribosomal protein L15, conserved site JHS88_01330 IPR030878 Ribosomal protein L15 JHS88_01330 IPR036227 Ribosomal L18e/L15P superfamily JHS88_01335 IPR002208 SecY/SEC61-alpha family JHS88_01335 IPR030659 SecY conserved site JHS88_01335 IPR023201 SecY domain superfamily JHS88_01335 IPR026593 Protein translocase subunit SecY JHS88_01340 IPR035977 Ribosomal protein L36 superfamily JHS88_01340 IPR000473 Ribosomal protein L36 JHS88_01345 IPR001892 Ribosomal protein S13 JHS88_01345 IPR018269 Ribosomal protein S13, conserved site JHS88_01345 IPR027437 30s ribosomal protein S13, C-terminal JHS88_01345 IPR010979 Ribosomal protein S13-like, H2TH JHS88_01345 IPR019980 Ribosomal protein S13, bacterial-type JHS88_01350 IPR001971 Ribosomal protein S11 JHS88_01350 IPR019981 Ribosomal protein S11, bacterial-type JHS88_01350 IPR018102 Ribosomal S11, conserved site JHS88_01350 IPR036967 Ribosomal protein S11 superfamily JHS88_01355 IPR022801 Ribosomal protein S4/S9 JHS88_01355 IPR001912 Ribosomal protein S4/S9, N-terminal JHS88_01355 IPR005709 Ribosomal protein S4, bacterial-type JHS88_01355 IPR018079 Ribosomal protein S4, conserved site JHS88_01355 IPR002942 RNA-binding S4 domain JHS88_01355 IPR036986 RNA-binding S4 domain superfamily JHS88_01360 IPR036643 DNA-directed RNA polymerase, insert domain superfamily JHS88_01360 IPR011260 RNA polymerase, alpha subunit, C-terminal JHS88_01360 IPR011773 DNA-directed RNA polymerase, alpha subunit JHS88_01360 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type JHS88_01360 IPR036603 RNA polymerase, RBP11-like subunit JHS88_01360 IPR011262 DNA-directed RNA polymerase, insert domain JHS88_01365 IPR000456 Ribosomal protein L17 JHS88_01365 IPR036373 Ribosomal protein L17 superfamily JHS88_01375 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain JHS88_01375 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal JHS88_01375 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily JHS88_01385 IPR016181 Acyl-CoA N-acyltransferase JHS88_01385 IPR000182 GNAT domain JHS88_01390 IPR014001 Helicase superfamily 1/2, ATP-binding domain JHS88_01390 IPR028619 ATP-dependent RNA helicase DbpA JHS88_01390 IPR011545 DEAD/DEAH box helicase domain JHS88_01390 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain JHS88_01390 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily JHS88_01390 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_01390 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site JHS88_01390 IPR014014 RNA helicase, DEAD-box type, Q motif JHS88_01390 IPR001650 Helicase, C-terminal JHS88_01400 IPR029052 Metallo-dependent phosphatase-like JHS88_01400 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase JHS88_01400 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type JHS88_01400 IPR041827 CpdB, N-terminal metallophosphatase domain JHS88_01400 IPR006146 5'-Nucleotidase, conserved site JHS88_01400 IPR036907 5'-Nucleotidase, C-terminal domain superfamily JHS88_01400 IPR008334 5'-Nucleotidase, C-terminal JHS88_01400 IPR006179 5'-Nucleotidase/apyrase JHS88_01405 IPR019478 Sirohaem synthase, dimerisation domain JHS88_01405 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site JHS88_01405 IPR000878 Tetrapyrrole methylase JHS88_01405 IPR035996 Tetrapyrrole methylase superfamily JHS88_01405 IPR014777 Tetrapyrrole methylase, subdomain 1 JHS88_01405 IPR014776 Tetrapyrrole methylase, subdomain 2 JHS88_01405 IPR006366 Uroporphyrin-III C-methyltransferase JHS88_01405 IPR036291 NAD(P)-binding domain superfamily JHS88_01405 IPR037115 Sirohaem synthase, dimerisation domain superfamily JHS88_01405 IPR012409 Sirohaem synthase JHS88_01405 IPR028281 Siroheme synthase, central domain JHS88_01405 IPR006367 Sirohaem synthase, N-terminal JHS88_01410 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JHS88_01410 IPR002500 Phosphoadenosine phosphosulphate reductase JHS88_01410 IPR011784 Sulphate adenylyltransferase, small subunit JHS88_01415 IPR000795 Transcription factor, GTP-binding domain JHS88_01415 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain JHS88_01415 IPR031157 Tr-type G domain, conserved site JHS88_01415 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_01415 IPR005225 Small GTP-binding protein domain JHS88_01415 IPR011779 Sulphate adenylyltransferase, large subunit JHS88_01415 IPR009000 Translation protein, beta-barrel domain superfamily JHS88_01415 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal JHS88_01420 IPR006037 Regulator of K+ conductance, C-terminal JHS88_01420 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily JHS88_01420 IPR004680 Citrate transporter-like domain JHS88_01420 IPR031312 Sodium/sulphate symporter, conserved site JHS88_01425 IPR002891 Adenylyl-sulfate kinase JHS88_01425 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_01445 IPR003593 AAA+ ATPase domain JHS88_01445 IPR003439 ABC transporter-like JHS88_01445 IPR017871 ABC transporter, conserved site JHS88_01445 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_01455 IPR019731 Protein of unknown function DUF2607 JHS88_01460 IPR006513 Conserved hypothetical protein CHP01626, YtfJ JHS88_01465 IPR009491 Protein of unknown function DUF1107 JHS88_01470 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily JHS88_01470 IPR002569 Peptide methionine sulphoxide reductase MsrA JHS88_01475 IPR000184 Bacterial surface antigen (D15) JHS88_01475 IPR039910 Surface antigen D15-like JHS88_01475 IPR035243 TamA, POTRA domain 1 JHS88_01480 IPR007452 Translocation and assembly module TamB JHS88_01485 IPR039126 Gamma-glutamylaminecyclotransferase JHS88_01485 IPR013024 Gamma-glutamyl cyclotransferase-like JHS88_01485 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily JHS88_01485 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like JHS88_01495 IPR036649 Inorganic pyrophosphatase superfamily JHS88_01495 IPR008162 Inorganic pyrophosphatase JHS88_01500 IPR020548 Fructose-1,6-bisphosphatase, active site JHS88_01500 IPR028343 Fructose-1,6-bisphosphatase JHS88_01500 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal JHS88_01500 IPR000146 Fructose-1,6-bisphosphatase class 1 JHS88_01505 IPR013221 Mur ligase, central JHS88_01505 IPR000713 Mur ligase, N-terminal catalytic domain JHS88_01505 IPR036615 Mur ligase, C-terminal domain superfamily JHS88_01505 IPR004101 Mur ligase, C-terminal JHS88_01505 IPR036565 Mur-like, catalytic domain superfamily JHS88_01505 IPR005757 Murein peptide ligase JHS88_01510 IPR003382 Flavoprotein JHS88_01510 IPR004507 Flavin prenyltransferase UbiX-like JHS88_01510 IPR036551 Flavin prenyltransferase-like JHS88_01515 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter JHS88_01515 IPR006061 Solute-binding family 1, conserved site JHS88_01515 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria JHS88_01520 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JHS88_01520 IPR035906 MetI-like superfamily JHS88_01520 IPR005947 Thiamine ABC transporter, permease protein JHS88_01525 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ JHS88_01525 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_01525 IPR003593 AAA+ ATPase domain JHS88_01525 IPR003439 ABC transporter-like JHS88_01525 IPR017871 ABC transporter, conserved site JHS88_01540 IPR011852 TRAP transporter solute receptor, TAXI family JHS88_01545 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_01545 IPR020900 Arginine repressor, DNA-binding domain JHS88_01545 IPR036390 Winged helix DNA-binding domain superfamily JHS88_01545 IPR001669 Arginine repressor JHS88_01545 IPR036251 Arginine repressor, C-terminal domain superfamily JHS88_01545 IPR020899 Arginine repressor, C-terminal JHS88_01550 IPR022383 Lactate/malate dehydrogenase, C-terminal JHS88_01550 IPR001236 Lactate/malate dehydrogenase, N-terminal JHS88_01550 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal JHS88_01550 IPR001252 Malate dehydrogenase, active site JHS88_01550 IPR010097 Malate dehydrogenase, type 1 JHS88_01550 IPR023958 Malate dehydrogenase, type 1, bacterial JHS88_01550 IPR036291 NAD(P)-binding domain superfamily JHS88_01550 IPR001557 L-lactate/malate dehydrogenase JHS88_01560 IPR008949 Isoprenoid synthase domain superfamily JHS88_01560 IPR033749 Polyprenyl synthetase, conserved site JHS88_01560 IPR000092 Polyprenyl synthetase JHS88_01565 IPR036164 L21-like superfamily JHS88_01565 IPR018258 Ribosomal protein L21, conserved site JHS88_01565 IPR028909 Ribosomal protein L21-like JHS88_01565 IPR001787 Ribosomal protein L21 JHS88_01570 IPR001684 Ribosomal protein L27 JHS88_01570 IPR018261 Ribosomal protein L27, conserved site JHS88_01575 IPR031167 OBG-type guanine nucleotide-binding (G) domain JHS88_01575 IPR035101 GTP-binding protein, Obg-type JHS88_01575 IPR014100 GTP-binding protein Obg/CgtA JHS88_01575 IPR006074 GTP1/OBG, conserved site JHS88_01575 IPR006169 GTP1/OBG domain JHS88_01575 IPR036726 GTP1/OBG domain superfamily JHS88_01575 IPR006073 GTP binding domain JHS88_01575 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_01580 IPR010619 Putative threonine/serine exporter JHS88_01585 IPR024528 Threonine/Serine exporter, ThrE JHS88_01585 IPR020914 Uncharacterised protein family UPF0442 JHS88_01590 IPR012259 Dihydrofolate reductase JHS88_01590 IPR024072 Dihydrofolate reductase-like domain superfamily JHS88_01590 IPR017925 Dihydrofolate reductase conserved site JHS88_01590 IPR001796 Dihydrofolate reductase domain JHS88_01595 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) JHS88_01595 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type JHS88_01595 IPR029052 Metallo-dependent phosphatase-like JHS88_01600 IPR023065 Uncharacterised protein family ApaG JHS88_01600 IPR007474 ApaG domain JHS88_01600 IPR036767 ApaG domain superfamily JHS88_01605 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site JHS88_01605 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_01605 IPR011530 Ribosomal RNA adenine dimethylase JHS88_01605 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm JHS88_01605 IPR023165 rRNA adenine dimethylase-like JHS88_01605 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal JHS88_01610 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase JHS88_01610 IPR005255 PdxA family JHS88_01615 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type JHS88_01615 IPR023034 Peptidyl-prolyl isomerase SurA JHS88_01615 IPR015391 SurA N-terminal JHS88_01615 IPR027304 Trigger factor/SurA domain superfamily JHS88_01625 IPR023749 Co-chaperone DjlA JHS88_01625 IPR007791 Co-chaperone DjlA, N-terminal JHS88_01625 IPR001623 DnaJ domain JHS88_01625 IPR036869 Chaperone J-domain superfamily JHS88_01625 IPR029024 TerB-like JHS88_01635 IPR004431 3-isopropylmalate dehydratase, small subunit JHS88_01635 IPR033940 3-isopropylmalate dehydratase, swivel domain JHS88_01635 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel JHS88_01635 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain JHS88_01660 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase JHS88_01660 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily JHS88_01670 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_01670 IPR005119 LysR, substrate-binding JHS88_01670 IPR000847 Transcription regulator HTH, LysR JHS88_01670 IPR036390 Winged helix DNA-binding domain superfamily JHS88_01675 IPR020845 AMP-binding, conserved site JHS88_01675 IPR000873 AMP-dependent synthetase/ligase JHS88_01675 IPR042099 AMP-dependent synthetase-like superfamily JHS88_01680 IPR012846 Acetolactate synthase, large subunit, biosynthetic JHS88_01680 IPR039368 Acetolactate synthase large subunit, TPP binding domain JHS88_01680 IPR029035 DHS-like NAD/FAD-binding domain superfamily JHS88_01680 IPR029061 Thiamin diphosphate-binding fold JHS88_01680 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain JHS88_01680 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding JHS88_01680 IPR012000 Thiamine pyrophosphate enzyme, central domain JHS88_01680 IPR000399 TPP-binding enzyme, conserved site JHS88_01685 IPR004789 Acetolactate synthase, small subunit JHS88_01685 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal JHS88_01685 IPR019455 Acetolactate synthase, small subunit, C-terminal JHS88_01685 IPR002912 ACT domain JHS88_01685 IPR039557 AHAS, ACT domain JHS88_01690 IPR000160 GGDEF domain JHS88_01690 IPR029787 Nucleotide cyclase JHS88_01700 IPR015806 Pyruvate kinase, insert domain superfamily JHS88_01700 IPR036918 Pyruvate kinase, C-terminal domain superfamily JHS88_01700 IPR015795 Pyruvate kinase, C-terminal JHS88_01700 IPR015793 Pyruvate kinase, barrel JHS88_01700 IPR018209 Pyruvate kinase, active site JHS88_01700 IPR011037 Pyruvate kinase-like, insert domain superfamily JHS88_01700 IPR040442 Pyruvate kinase-like domain superfamily JHS88_01700 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily JHS88_01700 IPR001697 Pyruvate kinase JHS88_01705 IPR014036 DeoR C-terminal sensor domain JHS88_01705 IPR001034 DeoR-type HTH domain JHS88_01705 IPR037171 NagB/RpiA transferase-like JHS88_01705 IPR018356 Transcription regulator, HTH DeoR-type, conserved site JHS88_01705 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_01705 IPR036390 Winged helix DNA-binding domain superfamily JHS88_01710 IPR029055 Nucleophile aminohydrolases, N-terminal JHS88_01710 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising JHS88_01710 IPR001347 Sugar isomerase (SIS) JHS88_01710 IPR035466 GlmS/AgaS, SIS domain 1 JHS88_01710 IPR017932 Glutamine amidotransferase type 2 domain JHS88_01710 IPR035490 GlmS/FrlB, SIS domain 2 JHS88_01720 IPR011006 CheY-like superfamily JHS88_01720 IPR001867 OmpR/PhoB-type DNA-binding domain JHS88_01720 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response JHS88_01720 IPR001789 Signal transduction response regulator, receiver domain JHS88_01720 IPR039420 Transcriptional regulatory protein WalR-like JHS88_01720 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_01725 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JHS88_01725 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JHS88_01725 IPR005467 Histidine kinase domain JHS88_01725 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JHS88_01725 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_01725 IPR003660 HAMP domain JHS88_01725 IPR006290 Heavy metal sensor kinase JHS88_01725 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_01730 IPR041492 Haloacid dehalogenase-like hydrolase JHS88_01730 IPR023198 Phosphoglycolate phosphatase-like, domain 2 JHS88_01730 IPR036412 HAD-like superfamily JHS88_01730 IPR006439 HAD hydrolase, subfamily IA JHS88_01730 IPR023214 HAD superfamily JHS88_01735 IPR038026 MtlR-like superfamily JHS88_01735 IPR007761 Mannitol repressor MtlR-like JHS88_01740 IPR013328 6-phosphogluconate dehydrogenase, domain 2 JHS88_01740 IPR023028 Mannitol-1-phosphate 5-dehydrogenase JHS88_01740 IPR000669 Mannitol dehydrogenase JHS88_01740 IPR013118 Mannitol dehydrogenase, C-terminal JHS88_01740 IPR023027 Mannitol dehydrogenase, conserved site JHS88_01740 IPR013131 Mannitol dehydrogenase, N-terminal JHS88_01740 IPR036291 NAD(P)-binding domain superfamily JHS88_01740 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily JHS88_01745 IPR002178 PTS EIIA type-2 domain JHS88_01745 IPR036095 PTS system IIB component-like superfamily JHS88_01745 IPR013011 Phosphotransferase system, EIIB component, type 2 JHS88_01745 IPR003501 Phosphotransferase system, EIIB component, type 2/3 JHS88_01745 IPR029503 Phosphotransferase system EIIB component, mannitol-specific JHS88_01745 IPR003352 Phosphotransferase system, EIIC JHS88_01745 IPR013014 Phosphotransferase system, EIIC component, type 2 JHS88_01745 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC JHS88_01745 IPR016152 Phosphotransferase/anion transporter JHS88_01775 IPR004872 Lipoprotein NlpA family JHS88_01815 IPR000055 Restriction endonuclease, type I, HsdS JHS88_01820 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain JHS88_01820 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily JHS88_01820 IPR003356 DNA methylase, adenine-specific JHS88_01820 IPR002052 DNA methylase, N-6 adenine-specific, conserved site JHS88_01820 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_01840 IPR002052 DNA methylase, N-6 adenine-specific, conserved site JHS88_01840 IPR001091 Restriction/modification DNA-methylase JHS88_01840 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_01840 IPR002941 DNA methylase N-4/N-6 JHS88_01845 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_01845 IPR001650 Helicase, C-terminal JHS88_01845 IPR029464 Type I restriction enzyme R protein, N-terminal domain JHS88_01845 IPR006935 Helicase/UvrB, N-terminal JHS88_01845 IPR013670 EcoEI R protein C-terminal domain JHS88_01845 IPR014001 Helicase superfamily 1/2, ATP-binding domain JHS88_01875 IPR012893 HipA-like, C-terminal JHS88_01875 IPR017508 HipA, N-terminal subdomain 1 JHS88_01890 IPR013325 RNA polymerase sigma factor, region 2 JHS88_01890 IPR013324 RNA polymerase sigma factor, region 3/4-like JHS88_01890 IPR028630 RNA polymerase sigma factor RpoD JHS88_01890 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_01890 IPR042189 Sigma-70 factor, region 1.1 superfamily JHS88_01890 IPR014284 RNA polymerase sigma-70 like domain JHS88_01890 IPR007630 RNA polymerase sigma-70 region 4 JHS88_01890 IPR000943 RNA polymerase sigma-70 JHS88_01890 IPR007624 RNA polymerase sigma-70 region 3 JHS88_01890 IPR007627 RNA polymerase sigma-70 region 2 JHS88_01890 IPR009042 RNA polymerase sigma-70 region 1.2 JHS88_01890 IPR007127 RNA polymerase sigma factor 70, region 1.1 JHS88_01890 IPR012760 RNA polymerase sigma factor RpoD, C-terminal JHS88_01890 IPR007631 RNA polymerase sigma factor 70, non-essential domain JHS88_01895 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily JHS88_01895 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal JHS88_01895 IPR013264 DNA primase, catalytic core, N-terminal JHS88_01895 IPR006295 DNA primase, DnaG JHS88_01895 IPR013173 DNA primase DnaG, DnaB-binding domain JHS88_01895 IPR036977 DNA Primase, CHC2-type zinc finger JHS88_01895 IPR030846 DNA primase DnaG, bacteria JHS88_01895 IPR034151 Bacterial DnaG primase, TOPRIM domain JHS88_01895 IPR006171 TOPRIM domain JHS88_01895 IPR019475 DNA primase, DnaB-helicase binding domain JHS88_01895 IPR002694 Zinc finger, CHC2-type JHS88_01900 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like JHS88_01900 IPR019004 Uncharacterised protein YqeY/Aim41 JHS88_01900 IPR042184 YqeY/Aim41, N-terminal domain JHS88_01900 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 JHS88_01905 IPR001911 Ribosomal protein S21 JHS88_01905 IPR018278 Ribosomal protein S21, conserved site JHS88_01905 IPR038380 Ribosomal protein S21 superfamily JHS88_01910 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD JHS88_01910 IPR017860 Peptidase M22, conserved site JHS88_01910 IPR017861 Kae1/TsaD family JHS88_01910 IPR000905 Gcp-like domain JHS88_01915 IPR029058 Alpha/Beta hydrolase fold JHS88_01915 IPR000073 Alpha/beta hydrolase fold-1 JHS88_01920 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY JHS88_01925 IPR006156 Dihydroneopterin aldolase JHS88_01925 IPR006157 Dihydroneopterin aldolase/epimerase domain JHS88_01930 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily JHS88_01930 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK JHS88_01935 IPR003824 Undecaprenyl-diphosphatase UppP JHS88_01940 IPR012006 tRNA nucleotidyltransferase, proteobacteria JHS88_01940 IPR003607 HD/PDEase domain JHS88_01940 IPR006674 HD domain JHS88_01940 IPR002646 Poly A polymerase, head domain JHS88_01940 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain JHS88_01945 IPR036366 PGBD superfamily JHS88_01945 IPR036365 PGBD-like superfamily JHS88_01945 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_01945 IPR003593 AAA+ ATPase domain JHS88_01945 IPR002477 Peptidoglycan binding-like JHS88_01955 IPR003646 SH3-like domain, bacterial-type JHS88_01955 IPR016476 SH3 domain protein JHS88_01960 IPR001204 Phosphate transporter JHS88_01965 IPR038078 PhoU-like domain superfamily JHS88_01965 IPR018445 Putative phosphate transport regulator JHS88_01965 IPR002727 Protein of unknown function DUF47 JHS88_01970 IPR033469 CYTH-like domain superfamily JHS88_01970 IPR023577 CYTH domain JHS88_01970 IPR039013 Inorganic triphosphatase YgiF JHS88_01970 IPR007899 CHAD domain JHS88_01980 IPR004090 Chemotaxis methyl-accepting receptor JHS88_01980 IPR003660 HAMP domain JHS88_01980 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JHS88_01985 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase JHS88_01985 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain JHS88_01985 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme JHS88_01990 IPR023030 Bifunctional protein HldE JHS88_01990 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site JHS88_01990 IPR004821 Cytidyltransferase-like domain JHS88_01990 IPR011611 Carbohydrate kinase PfkB JHS88_01990 IPR011913 RfaE bifunctional protein, domain I JHS88_01990 IPR011914 RfaE bifunctional protein, domain II JHS88_01990 IPR029056 Ribokinase-like JHS88_01990 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JHS88_01995 IPR003423 Outer membrane efflux protein JHS88_01995 IPR010130 Type I secretion outer membrane protein, TolC JHS88_02000 IPR015797 NUDIX hydrolase-like domain superfamily JHS88_02000 IPR020084 NUDIX hydrolase, conserved site JHS88_02000 IPR000086 NUDIX hydrolase domain JHS88_02000 IPR004385 Nucleoside diphosphate pyrophosphatase JHS88_02005 IPR009659 Protein of unknown function DUF1249 JHS88_02010 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type JHS88_02010 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA JHS88_02010 IPR029052 Metallo-dependent phosphatase-like JHS88_02015 IPR029058 Alpha/Beta hydrolase fold JHS88_02015 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA JHS88_02020 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_02020 IPR018522 DNA topoisomerase, type IIA, conserved site JHS88_02020 IPR006171 TOPRIM domain JHS88_02020 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative JHS88_02020 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 JHS88_02020 IPR002288 DNA gyrase B subunit, C-terminal JHS88_02020 IPR013760 DNA topoisomerase, type IIA-like domain superfamily JHS88_02020 IPR001241 DNA topoisomerase, type IIA JHS88_02020 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JHS88_02020 IPR020568 Ribosomal protein S5 domain 2-type fold JHS88_02020 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_02020 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal JHS88_02025 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat JHS88_02025 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal JHS88_02025 IPR013760 DNA topoisomerase, type IIA-like domain superfamily JHS88_02025 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal JHS88_02025 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta JHS88_02025 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily JHS88_02025 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative JHS88_02030 IPR001940 Peptidase S1C JHS88_02030 IPR001478 PDZ domain JHS88_02030 IPR011783 Peptidase S1C, DegS JHS88_02030 IPR009003 Peptidase S1, PA clan JHS88_02030 IPR036034 PDZ superfamily JHS88_02035 IPR001478 PDZ domain JHS88_02035 IPR036034 PDZ superfamily JHS88_02035 IPR011782 Peptidase S1C, Do JHS88_02035 IPR009003 Peptidase S1, PA clan JHS88_02035 IPR001940 Peptidase S1C JHS88_02040 IPR009386 Protein of unknown function DUF1043 JHS88_02045 IPR030870 Cell division protein ZapE JHS88_02045 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_02045 IPR005654 ATPase, AFG1-like JHS88_02050 IPR005822 Ribosomal protein L13 JHS88_02050 IPR005823 Ribosomal protein L13, bacterial-type JHS88_02050 IPR023563 Ribosomal protein L13, conserved site JHS88_02050 IPR036899 Ribosomal protein L13 superfamily JHS88_02055 IPR020574 Ribosomal protein S9, conserved site JHS88_02055 IPR023035 Ribosomal protein S9, bacterial/plastid JHS88_02055 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JHS88_02055 IPR000754 Ribosomal protein S9 JHS88_02055 IPR020568 Ribosomal protein S5 domain 2-type fold JHS88_02060 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit JHS88_02060 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal JHS88_02060 IPR005805 Rieske iron-sulphur protein, C-terminal JHS88_02060 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily JHS88_02060 IPR017941 Rieske [2Fe-2S] iron-sulphur domain JHS88_02060 IPR014349 Rieske iron-sulphur protein JHS88_02065 IPR005798 Cytochrome b/b6, C-terminal JHS88_02065 IPR005797 Cytochrome b/b6, N-terminal JHS88_02065 IPR027387 Cytochrome b/b6-like domain superfamily JHS88_02065 IPR030689 Cytochrome b JHS88_02065 IPR016174 Di-haem cytochrome, transmembrane JHS88_02065 IPR036150 Cytochrome b/b6, C-terminal domain superfamily JHS88_02070 IPR036909 Cytochrome c-like domain superfamily JHS88_02070 IPR002326 Cytochrome c1 JHS88_02070 IPR009056 Cytochrome c-like domain JHS88_02075 IPR010987 Glutathione S-transferase, C-terminal-like JHS88_02075 IPR036282 Glutathione S-transferase, C-terminal domain superfamily JHS88_02075 IPR040079 Glutathione Transferase family JHS88_02075 IPR004045 Glutathione S-transferase, N-terminal JHS88_02075 IPR004046 Glutathione S-transferase, C-terminal JHS88_02075 IPR034341 Stringent starvation protein A, N-terminal JHS88_02075 IPR036249 Thioredoxin-like superfamily JHS88_02080 IPR036760 SspB-like superfamily JHS88_02080 IPR007481 Stringent starvation protein B JHS88_02085 IPR014004 Transport-associated and nodulation domain, bacteria JHS88_02085 IPR007055 BON domain JHS88_02090 IPR023070 DnaA initiator-associating protein JHS88_02090 IPR001347 Sugar isomerase (SIS) JHS88_02090 IPR035461 GmhA/DiaA JHS88_02095 IPR011856 tRNA endonuclease-like domain superfamily JHS88_02095 IPR011335 Restriction endonuclease type II-like JHS88_02095 IPR003509 Uncharacterised protein family UPF0102 JHS88_02100 IPR028082 Periplasmic binding protein-like I JHS88_02100 IPR011990 Tetratricopeptide-like helical domain superfamily JHS88_02100 IPR007443 Penicillin-binding protein activator LpoA JHS88_02105 IPR000878 Tetrapyrrole methylase JHS88_02105 IPR035996 Tetrapyrrole methylase superfamily JHS88_02105 IPR014777 Tetrapyrrole methylase, subdomain 1 JHS88_02105 IPR014776 Tetrapyrrole methylase, subdomain 2 JHS88_02105 IPR008189 rRNA small subunit methyltransferase I JHS88_02105 IPR018063 SAM-dependent methyltransferase RsmI, conserved site JHS88_02115 IPR002903 Ribosomal RNA small subunit methyltransferase H JHS88_02115 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily JHS88_02115 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_02120 IPR011922 Cell division protein FtsL JHS88_02125 IPR036138 Penicillin-binding protein, dimerisation domain superfamily JHS88_02125 IPR001460 Penicillin-binding protein, transpeptidase JHS88_02125 IPR012338 Beta-lactamase/transpeptidase-like JHS88_02125 IPR037532 Peptidoglycan D,D-transpeptidase FtsI JHS88_02125 IPR005311 Penicillin-binding protein, dimerisation domain JHS88_02130 IPR036565 Mur-like, catalytic domain superfamily JHS88_02130 IPR004101 Mur ligase, C-terminal JHS88_02130 IPR036615 Mur ligase, C-terminal domain superfamily JHS88_02130 IPR013221 Mur ligase, central JHS88_02130 IPR000713 Mur ligase, N-terminal catalytic domain JHS88_02130 IPR035911 MurE/MurF, N-terminal JHS88_02130 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase JHS88_02135 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase JHS88_02135 IPR000713 Mur ligase, N-terminal catalytic domain JHS88_02135 IPR013221 Mur ligase, central JHS88_02135 IPR035911 MurE/MurF, N-terminal JHS88_02135 IPR004101 Mur ligase, C-terminal JHS88_02135 IPR036565 Mur-like, catalytic domain superfamily JHS88_02135 IPR036615 Mur ligase, C-terminal domain superfamily JHS88_02140 IPR000715 Glycosyl transferase, family 4 JHS88_02140 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase JHS88_02140 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site JHS88_02145 IPR004101 Mur ligase, C-terminal JHS88_02145 IPR036615 Mur ligase, C-terminal domain superfamily JHS88_02145 IPR013221 Mur ligase, central JHS88_02145 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase JHS88_02145 IPR036565 Mur-like, catalytic domain superfamily JHS88_02150 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA JHS88_02150 IPR013437 Probable peptidoglycan glycosyltransferase FtsW JHS88_02150 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site JHS88_02155 IPR004276 Glycosyltransferase family 28, N-terminal domain JHS88_02155 IPR007235 Glycosyl transferase, family 28, C-terminal JHS88_02155 IPR006009 N-acetylglucosaminyltransferase, MurG JHS88_02160 IPR036565 Mur-like, catalytic domain superfamily JHS88_02160 IPR013221 Mur ligase, central JHS88_02160 IPR036615 Mur ligase, C-terminal domain superfamily JHS88_02160 IPR005758 UDP-N-acetylmuramate--L-alanine ligase JHS88_02160 IPR004101 Mur ligase, C-terminal JHS88_02160 IPR000713 Mur ligase, N-terminal catalytic domain JHS88_02165 IPR026579 Cell division protein FtsQ JHS88_02165 IPR034746 POTRA domain JHS88_02165 IPR013685 POTRA domain, FtsQ-type JHS88_02165 IPR005548 Cell division protein FtsQ/DivIB JHS88_02170 IPR020823 Cell division protein FtsA JHS88_02170 IPR003494 SHS2 domain inserted in FtsA JHS88_02175 IPR024757 Cell division protein FtsZ, C-terminal JHS88_02175 IPR020805 Cell division protein FtsZ, conserved site JHS88_02175 IPR008280 Tubulin/FtsZ, C-terminal JHS88_02175 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain JHS88_02175 IPR036525 Tubulin/FtsZ, GTPase domain superfamily JHS88_02175 IPR003008 Tubulin/FtsZ, GTPase domain JHS88_02175 IPR000158 Cell division protein FtsZ JHS88_02180 IPR020568 Ribosomal protein S5 domain 2-type fold JHS88_02180 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase JHS88_02180 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal JHS88_02180 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal JHS88_02190 IPR036266 SecA, Wing/Scaffold superfamily JHS88_02190 IPR036670 SecA, preprotein cross-linking domain superfamily JHS88_02190 IPR011116 SecA Wing/Scaffold JHS88_02190 IPR011130 SecA, preprotein cross-linking domain JHS88_02190 IPR014018 SecA motor DEAD JHS88_02190 IPR011115 SecA DEAD-like, N-terminal JHS88_02190 IPR020937 SecA conserved site JHS88_02190 IPR000185 Protein translocase subunit SecA JHS88_02190 IPR004027 SEC-C motif JHS88_02190 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_02195 IPR000086 NUDIX hydrolase domain JHS88_02195 IPR020084 NUDIX hydrolase, conserved site JHS88_02195 IPR015797 NUDIX hydrolase-like domain superfamily JHS88_02195 IPR020476 NUDIX hydrolase JHS88_02195 IPR003561 Mutator MutT JHS88_02200 IPR022663 Dihydrodipicolinate reductase, C-terminal JHS88_02200 IPR036291 NAD(P)-binding domain superfamily JHS88_02200 IPR023940 Dihydrodipicolinate reductase JHS88_02200 IPR022664 Dihydrodipicolinate reductase, conserved site JHS88_02200 IPR000846 Dihydrodipicolinate reductase, N-terminal JHS88_02205 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain JHS88_02205 IPR029062 Class I glutamine amidotransferase-like JHS88_02205 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily JHS88_02205 IPR017926 Glutamine amidotransferase JHS88_02205 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain JHS88_02205 IPR006274 Carbamoyl-phosphate synthase, small subunit JHS88_02210 IPR011607 Methylglyoxal synthase-like domain JHS88_02210 IPR036914 Methylglyoxal synthase-like domain superfamily JHS88_02210 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain JHS88_02210 IPR016185 Pre-ATP-grasp domain superfamily JHS88_02210 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain JHS88_02210 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain JHS88_02210 IPR011761 ATP-grasp fold JHS88_02210 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily JHS88_02210 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain JHS88_02210 IPR006275 Carbamoyl-phosphate synthase, large subunit JHS88_02225 IPR002781 Transmembrane protein TauE-like JHS88_02230 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_02230 IPR005119 LysR, substrate-binding JHS88_02230 IPR000847 Transcription regulator HTH, LysR JHS88_02230 IPR036390 Winged helix DNA-binding domain superfamily JHS88_02235 IPR005115 Uncharacterised domain UPF0126 JHS88_02240 IPR002491 ABC transporter periplasmic binding domain JHS88_02240 IPR023544 ABC transporter, vitamin B12-binding protein JHS88_02245 IPR004485 Cobalamin biosynthesis CobD/CbiB JHS88_02245 IPR031347 Protein AmpE JHS88_02250 IPR010049 MTA/SAH nucleosidase JHS88_02250 IPR000845 Nucleoside phosphorylase domain JHS88_02250 IPR035994 Nucleoside phosphorylase superfamily JHS88_02260 IPR009051 Alpha-helical ferredoxin JHS88_02260 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JHS88_02260 IPR028261 Dihydroprymidine dehydrogenase domain II JHS88_02260 IPR036188 FAD/NAD(P)-binding domain superfamily JHS88_02260 IPR023753 FAD/NAD(P)-binding domain JHS88_02260 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 JHS88_02265 IPR002932 Glutamate synthase domain JHS88_02265 IPR006982 Glutamate synthase, central-N JHS88_02265 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily JHS88_02265 IPR029055 Nucleophile aminohydrolases, N-terminal JHS88_02265 IPR017932 Glutamine amidotransferase type 2 domain JHS88_02265 IPR013785 Aldolase-type TIM barrel JHS88_02265 IPR002489 Glutamate synthase, alpha subunit, C-terminal JHS88_02270 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 JHS88_02270 IPR009051 Alpha-helical ferredoxin JHS88_02270 IPR023753 FAD/NAD(P)-binding domain JHS88_02270 IPR036188 FAD/NAD(P)-binding domain superfamily JHS88_02270 IPR028261 Dihydroprymidine dehydrogenase domain II JHS88_02275 IPR013785 Aldolase-type TIM barrel JHS88_02275 IPR017932 Glutamine amidotransferase type 2 domain JHS88_02275 IPR002489 Glutamate synthase, alpha subunit, C-terminal JHS88_02275 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily JHS88_02275 IPR006982 Glutamate synthase, central-N JHS88_02275 IPR002932 Glutamate synthase domain JHS88_02275 IPR029055 Nucleophile aminohydrolases, N-terminal JHS88_02280 IPR007197 Radical SAM JHS88_02280 IPR039661 ELP3/YhcC JHS88_02280 IPR006638 Elp3/MiaB/NifB JHS88_02280 IPR032432 Radical SAM, C-terminal extension JHS88_02280 IPR005911 Protein YhcC-like JHS88_02280 IPR023404 Radical SAM, alpha/beta horseshoe JHS88_02285 IPR001633 EAL domain JHS88_02285 IPR035919 EAL domain superfamily JHS88_02285 IPR029016 GAF-like domain superfamily JHS88_02285 IPR003018 GAF domain JHS88_02285 IPR029787 Nucleotide cyclase JHS88_02285 IPR016132 Phytochrome chromophore attachment domain JHS88_02285 IPR001294 Phytochrome JHS88_02285 IPR013515 Phytochrome, central region JHS88_02285 IPR000160 GGDEF domain JHS88_02290 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain JHS88_02290 IPR001789 Signal transduction response regulator, receiver domain JHS88_02290 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB JHS88_02290 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JHS88_02290 IPR013767 PAS fold JHS88_02290 IPR035965 PAS domain superfamily JHS88_02290 IPR000014 PAS domain JHS88_02290 IPR036641 HPT domain superfamily JHS88_02290 IPR040642 Histidine kinase receptor ArcB, transmembrane domain JHS88_02290 IPR000700 PAS-associated, C-terminal JHS88_02290 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JHS88_02290 IPR005467 Histidine kinase domain JHS88_02290 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_02290 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_02290 IPR011006 CheY-like superfamily JHS88_02290 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily JHS88_02290 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JHS88_02300 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_02300 IPR039420 Transcriptional regulatory protein WalR-like JHS88_02300 IPR001789 Signal transduction response regulator, receiver domain JHS88_02300 IPR016032 Signal transduction response regulator, C-terminal effector JHS88_02300 IPR001867 OmpR/PhoB-type DNA-binding domain JHS88_02300 IPR011006 CheY-like superfamily JHS88_02310 IPR010203 Regulator of ribonuclease activity A JHS88_02310 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein JHS88_02310 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily JHS88_02320 IPR001048 Aspartate/glutamate/uridylate kinase JHS88_02320 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain JHS88_02320 IPR036393 Acetylglutamate kinase-like superfamily JHS88_02320 IPR002912 ACT domain JHS88_02320 IPR036291 NAD(P)-binding domain superfamily JHS88_02320 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I JHS88_02320 IPR001342 Homoserine dehydrogenase, catalytic JHS88_02320 IPR027795 CASTOR, ACT domain JHS88_02320 IPR018042 Aspartate kinase, conserved site JHS88_02320 IPR001341 Aspartate kinase JHS88_02320 IPR019811 Homoserine dehydrogenase, conserved site JHS88_02320 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding JHS88_02325 IPR006204 GHMP kinase N-terminal domain JHS88_02325 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JHS88_02325 IPR020568 Ribosomal protein S5 domain 2-type fold JHS88_02325 IPR000870 Homoserine kinase JHS88_02325 IPR006203 GHMP kinase, ATP-binding, conserved site JHS88_02325 IPR013750 GHMP kinase, C-terminal domain JHS88_02325 IPR036554 GHMP kinase, C-terminal domain superfamily JHS88_02330 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme JHS88_02330 IPR004450 Threonine synthase-like JHS88_02330 IPR037158 Threonine synthase, N-terminal domain superfamily JHS88_02330 IPR029144 Threonine synthase, N-terminal JHS88_02330 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site JHS88_02330 IPR001926 Pyridoxal-phosphate dependent enzyme JHS88_02335 IPR011140 Autonomous glycyl radical cofactor GrcA JHS88_02335 IPR001150 Glycine radical domain JHS88_02335 IPR019777 Formate C-acetyltransferase glycine radical, conserved site JHS88_02340 IPR018246 AP endonuclease 2, zinc binding site JHS88_02340 IPR001719 AP endonuclease 2 JHS88_02340 IPR036237 Xylose isomerase-like superfamily JHS88_02340 IPR013022 Xylose isomerase-like, TIM barrel domain JHS88_02345 IPR036895 Uracil-DNA glycosylase-like domain superfamily JHS88_02345 IPR005122 Uracil-DNA glycosylase-like JHS88_02345 IPR018085 Uracil-DNA glycosylase, active site JHS88_02345 IPR002043 Uracil-DNA glycosylase family 1 JHS88_02360 IPR001463 Sodium:alanine symporter JHS88_02365 IPR005583 Peroxide stress protein YaaA JHS88_02370 IPR014001 Helicase superfamily 1/2, ATP-binding domain JHS88_02370 IPR001650 Helicase, C-terminal JHS88_02370 IPR028621 ATP-dependent RNA helicase SrmB JHS88_02370 IPR011545 DEAD/DEAH box helicase domain JHS88_02370 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_02370 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site JHS88_02370 IPR014014 RNA helicase, DEAD-box type, Q motif JHS88_02375 IPR002052 DNA methylase, N-6 adenine-specific, conserved site JHS88_02375 IPR007848 Methyltransferase small domain JHS88_02375 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase JHS88_02375 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_02380 IPR004685 Branched-chain amino acid transport system II carrier protein JHS88_02385 IPR029039 Flavoprotein-like superfamily JHS88_02385 IPR010086 Flavodoxin, long chain JHS88_02385 IPR001226 Flavodoxin, conserved site JHS88_02385 IPR008254 Flavodoxin/nitric oxide synthase JHS88_02390 IPR011932 Tyrosine recombinase XerD JHS88_02390 IPR004107 Integrase, SAM-like, N-terminal JHS88_02390 IPR010998 Integrase/recombinase, N-terminal JHS88_02390 IPR002104 Integrase, catalytic domain JHS88_02390 IPR013762 Integrase-like, catalytic domain superfamily JHS88_02390 IPR011010 DNA breaking-rejoining enzyme, catalytic core JHS88_02390 IPR023009 Tyrosine recombinase XerC/XerD JHS88_02395 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal JHS88_02395 IPR017937 Thioredoxin, conserved site JHS88_02395 IPR033954 Disulphide bond isomerase, DsbC/G JHS88_02395 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily JHS88_02395 IPR012336 Thioredoxin-like fold JHS88_02395 IPR036249 Thioredoxin-like superfamily JHS88_02395 IPR013766 Thioredoxin domain JHS88_02400 IPR041122 RecJ, OB domain JHS88_02400 IPR004610 Bacterial RecJ exonuclease JHS88_02400 IPR003156 DHHA1 domain JHS88_02400 IPR001667 DDH domain JHS88_02400 IPR038763 DHH phosphoesterase superfamily JHS88_02410 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type JHS88_02410 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) JHS88_02410 IPR006195 Aminoacyl-tRNA synthetase, class II JHS88_02410 IPR002313 Lysine-tRNA ligase, class II JHS88_02410 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal JHS88_02410 IPR012340 Nucleic acid-binding, OB-fold JHS88_02415 IPR011006 CheY-like superfamily JHS88_02415 IPR003593 AAA+ ATPase domain JHS88_02415 IPR009057 Homeobox-like domain superfamily JHS88_02415 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 JHS88_02415 IPR002197 DNA binding HTH domain, Fis-type JHS88_02415 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_02415 IPR001789 Signal transduction response regulator, receiver domain JHS88_02415 IPR002078 RNA polymerase sigma factor 54 interaction domain JHS88_02415 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JHS88_02415 IPR025944 Sigma-54 interaction domain, conserved site JHS88_02425 IPR036812 NADP-dependent oxidoreductase domain superfamily JHS88_02425 IPR023210 NADP-dependent oxidoreductase domain JHS88_02425 IPR020471 Aldo/keto reductase JHS88_02435 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II JHS88_02435 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily JHS88_02435 IPR011335 Restriction endonuclease type II-like JHS88_02435 IPR004230 DNA mismatch repair protein MutH JHS88_02440 IPR000086 NUDIX hydrolase domain JHS88_02440 IPR015797 NUDIX hydrolase-like domain superfamily JHS88_02440 IPR020084 NUDIX hydrolase, conserved site JHS88_02440 IPR022927 RNA pyrophosphohydrolase RppH JHS88_02440 IPR020476 NUDIX hydrolase JHS88_02445 IPR003018 GAF domain JHS88_02445 IPR008731 Phosphotransferase system, enzyme I N-terminal JHS88_02445 IPR029016 GAF-like domain superfamily JHS88_02445 IPR008279 PEP-utilising enzyme, mobile domain JHS88_02445 IPR018274 PEP-utilising enzyme, active site JHS88_02445 IPR040442 Pyruvate kinase-like domain superfamily JHS88_02445 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily JHS88_02445 IPR036618 PtsI, HPr-binding domain superfamily JHS88_02445 IPR000121 PEP-utilising enzyme, C-terminal JHS88_02445 IPR006318 Phosphotransferase system, enzyme I-like JHS88_02445 IPR036637 Phosphohistidine domain superfamily JHS88_02445 IPR023151 PEP-utilising enzyme, conserved site JHS88_02450 IPR002781 Transmembrane protein TauE-like JHS88_02455 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt JHS88_02460 IPR020940 Thymidylate synthase, active site JHS88_02460 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain JHS88_02460 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily JHS88_02460 IPR000398 Thymidylate synthase JHS88_02470 IPR003841 Sodium-dependent phosphate transport protein JHS88_02470 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein JHS88_02475 IPR005119 LysR, substrate-binding JHS88_02475 IPR036390 Winged helix DNA-binding domain superfamily JHS88_02475 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_02475 IPR000847 Transcription regulator HTH, LysR JHS88_02480 IPR011991 ArsR-like helix-turn-helix domain JHS88_02480 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_02480 IPR036390 Winged helix DNA-binding domain superfamily JHS88_02480 IPR001845 HTH ArsR-type DNA-binding domain JHS88_02485 IPR002583 Ribosomal protein S20 JHS88_02485 IPR036510 Ribosomal protein S20 superfamily JHS88_02490 IPR004268 Peptidoglycan biosynthesis protein MurJ JHS88_02495 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JHS88_02495 IPR023465 Riboflavin kinase domain superfamily JHS88_02495 IPR015864 FAD synthetase JHS88_02495 IPR002606 Riboflavin kinase, bacterial JHS88_02495 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic JHS88_02495 IPR023468 Riboflavin kinase JHS88_02500 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site JHS88_02500 IPR002300 Aminoacyl-tRNA synthetase, class Ia JHS88_02500 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain JHS88_02500 IPR002301 Isoleucine-tRNA ligase JHS88_02500 IPR023585 Isoleucine-tRNA ligase, type 1 JHS88_02500 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding JHS88_02500 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JHS88_02500 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding JHS88_02500 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain JHS88_02500 IPR010663 Zinc finger, FPG/IleRS-type JHS88_02505 IPR001872 Peptidase A8, signal peptidase II JHS88_02510 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain JHS88_02515 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase JHS88_02520 IPR007492 LytTR DNA-binding domain JHS88_02520 IPR011006 CheY-like superfamily JHS88_02520 IPR001789 Signal transduction response regulator, receiver domain JHS88_02525 IPR003018 GAF domain JHS88_02525 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_02525 IPR010559 Signal transduction histidine kinase, internal region JHS88_02525 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region JHS88_02530 IPR003706 CstA, N-terminal domain JHS88_02545 IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein JHS88_02545 IPR001347 Sugar isomerase (SIS) JHS88_02545 IPR005486 Glucokinase regulatory protein, conserved site JHS88_02545 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ JHS88_02550 IPR005338 Anhydro-N-acetylmuramic acid kinase JHS88_02555 IPR017853 Glycoside hydrolase superfamily JHS88_02555 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily JHS88_02555 IPR019800 Glycoside hydrolase, family 3, active site JHS88_02555 IPR022956 Beta-hexosaminidase, bacterial JHS88_02555 IPR001764 Glycoside hydrolase, family 3, N-terminal JHS88_02560 IPR013785 Aldolase-type TIM barrel JHS88_02560 IPR006219 DHAP synthase, class 1 JHS88_02560 IPR006218 DAHP synthetase I/KDSA JHS88_02565 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein JHS88_02565 IPR036263 Chorismate mutase type II superfamily JHS88_02565 IPR036979 Chorismate mutase domain superfamily JHS88_02565 IPR002701 Chorismate mutase II, prokaryotic-type JHS88_02565 IPR011277 Chorismate mutase, T-protein JHS88_02565 IPR036291 NAD(P)-binding domain superfamily JHS88_02565 IPR003099 Prephenate dehydrogenase JHS88_02565 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily JHS88_02570 IPR011055 Duplicated hybrid motif JHS88_02570 IPR007340 Opacity-associated protein A JHS88_02570 IPR016047 Peptidase M23 JHS88_02575 IPR027021 Cyclic di-GMP binding protein, PA4608 type JHS88_02575 IPR009875 PilZ domain JHS88_02580 IPR003593 AAA+ ATPase domain JHS88_02580 IPR032781 ABC-transporter extension domain JHS88_02580 IPR003439 ABC transporter-like JHS88_02580 IPR017871 ABC transporter, conserved site JHS88_02580 IPR022374 Energy-dependent translational throttle protein EttA JHS88_02580 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_02585 IPR023346 Lysozyme-like domain superfamily JHS88_02585 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily JHS88_02585 IPR012289 Lytic transglycosylase, superhelical linker JHS88_02585 IPR008939 Lytic transglycosylase, superhelical U-shaped JHS88_02585 IPR000189 Prokaryotic transglycosylase, active site JHS88_02585 IPR008258 Transglycosylase SLT domain 1 JHS88_02590 IPR038116 TrpR-like superfamily JHS88_02590 IPR010921 Trp repressor/replication initiator JHS88_02590 IPR000831 Trp repressor JHS88_02590 IPR013335 Trp repressor, bacterial JHS88_02595 IPR002786 Inosine/xanthosine triphosphatase JHS88_02595 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 JHS88_02595 IPR029001 Inosine triphosphate pyrophosphatase-like JHS88_02600 IPR002912 ACT domain JHS88_02600 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase JHS88_02600 IPR036263 Chorismate mutase type II superfamily JHS88_02600 IPR036979 Chorismate mutase domain superfamily JHS88_02600 IPR010952 Chorismate mutase, gammaproteobacteria JHS88_02600 IPR001086 Prephenate dehydratase JHS88_02600 IPR018528 Prephenate dehydratase, conserved site JHS88_02600 IPR002701 Chorismate mutase II, prokaryotic-type JHS88_02605 IPR036567 Ribosome hibernation promotion factor-like JHS88_02605 IPR003489 Ribosome hibernation promoting factor/RaiA JHS88_02610 IPR000189 Prokaryotic transglycosylase, active site JHS88_02610 IPR023346 Lysozyme-like domain superfamily JHS88_02610 IPR008258 Transglycosylase SLT domain 1 JHS88_02615 IPR017689 Outer membrane protein assembly factor BamD JHS88_02615 IPR039565 Outer membrane lipoprotein BamD-like JHS88_02615 IPR011990 Tetratricopeptide-like helical domain superfamily JHS88_02620 IPR002942 RNA-binding S4 domain JHS88_02620 IPR020103 Pseudouridine synthase, catalytic domain superfamily JHS88_02620 IPR006225 Pseudouridine synthase, RluC/RluD JHS88_02620 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site JHS88_02620 IPR006145 Pseudouridine synthase, RsuA/RluA JHS88_02620 IPR036986 RNA-binding S4 domain superfamily JHS88_02625 IPR038371 Multi-copper polyphenol oxidoreductase superfamily JHS88_02625 IPR011324 Cytotoxic necrotizing factor-like, catalytic JHS88_02625 IPR003730 Multi-copper polyphenol oxidoreductase JHS88_02630 IPR018368 ClpA/B, conserved site 1 JHS88_02630 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_02630 IPR041546 ClpA/ClpB, AAA lid domain JHS88_02630 IPR028299 ClpA/B, conserved site 2 JHS88_02630 IPR001270 ClpA/B family JHS88_02630 IPR017730 Chaperonin ClpB JHS88_02630 IPR036628 Clp, N-terminal domain superfamily JHS88_02630 IPR019489 Clp ATPase, C-terminal JHS88_02630 IPR003959 ATPase, AAA-type, core JHS88_02630 IPR003593 AAA+ ATPase domain JHS88_02630 IPR004176 Clp, N-terminal JHS88_02675 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily JHS88_02675 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase JHS88_02685 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JHS88_02685 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JHS88_02690 IPR001539 Peptidase U32 JHS88_02690 IPR032525 Peptidase family U32, C-terminal JHS88_02695 IPR007476 Putative exonuclease, RdgC JHS88_02700 IPR011006 CheY-like superfamily JHS88_02700 IPR001867 OmpR/PhoB-type DNA-binding domain JHS88_02700 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB JHS88_02700 IPR001789 Signal transduction response regulator, receiver domain JHS88_02700 IPR039420 Transcriptional regulatory protein WalR-like JHS88_02700 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_02705 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR JHS88_02705 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JHS88_02705 IPR021766 Phosphate regulon sensor protein PhoR JHS88_02705 IPR013767 PAS fold JHS88_02705 IPR000014 PAS domain JHS88_02705 IPR035965 PAS domain superfamily JHS88_02705 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JHS88_02705 IPR005467 Histidine kinase domain JHS88_02705 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_02705 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_02705 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JHS88_02710 IPR024370 PBP domain JHS88_02710 IPR011862 Phosphate binding protein JHS88_02715 IPR022371 Exopolyphosphatase JHS88_02715 IPR003695 Ppx/GppA phosphatase JHS88_02715 IPR030673 Pyrophosphatase, GppA/Ppx-type JHS88_02720 IPR036830 Polyphosphate kinase middle domain superfamily JHS88_02720 IPR036832 Polyphosphate kinase N-terminal domain superfamily JHS88_02720 IPR024953 Polyphosphate kinase middle domain JHS88_02720 IPR025200 Polyphosphate kinase C-terminal domain 2 JHS88_02720 IPR003414 Polyphosphate kinase JHS88_02720 IPR001736 Phospholipase D/Transphosphatidylase JHS88_02720 IPR025198 Polyphosphate kinase N-terminal domain JHS88_02720 IPR041108 Polyphosphate kinase, C-terminal domain 1 JHS88_02725 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JHS88_02725 IPR035906 MetI-like superfamily JHS88_02725 IPR011864 Phosphate ABC transporter, permease protein PstC JHS88_02730 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JHS88_02730 IPR005672 Phosphate transport system permease protein PstA JHS88_02730 IPR035906 MetI-like superfamily JHS88_02735 IPR003593 AAA+ ATPase domain JHS88_02735 IPR003439 ABC transporter-like JHS88_02735 IPR017871 ABC transporter, conserved site JHS88_02735 IPR015850 ABC transporter, phosphate import, PstB JHS88_02735 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_02735 IPR005670 Phosphate transport system permease protein 1 JHS88_02740 IPR028366 Phosphate transport system protein PhoU JHS88_02740 IPR038078 PhoU-like domain superfamily JHS88_02740 IPR026022 PhoU domain JHS88_02745 IPR022486 Polyphosphate kinase 2, PA0141 JHS88_02745 IPR016898 Polyphosphate kinase 2 JHS88_02745 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_02745 IPR022488 Polyphosphate kinase-2-related JHS88_02750 IPR005627 Copper homeostasis protein CutC JHS88_02750 IPR023648 Copper homeostasis CutC domain JHS88_02750 IPR036822 Copper homeostasis (CutC) domain superfamily JHS88_02755 IPR024706 Peroxiredoxin, AhpC-type JHS88_02755 IPR019479 Peroxiredoxin, C-terminal JHS88_02755 IPR036249 Thioredoxin-like superfamily JHS88_02755 IPR013766 Thioredoxin domain JHS88_02755 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant JHS88_02760 IPR000847 Transcription regulator HTH, LysR JHS88_02760 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_02760 IPR036390 Winged helix DNA-binding domain superfamily JHS88_02760 IPR005119 LysR, substrate-binding JHS88_02765 IPR011076 Malate synthase-like superfamily JHS88_02765 IPR001465 Malate synthase JHS88_02765 IPR019830 Malate synthase, conserved site JHS88_02765 IPR006252 Malate synthase A JHS88_02770 IPR039556 ICL/PEPM domain JHS88_02770 IPR006254 Isocitrate lyase JHS88_02770 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site JHS88_02770 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily JHS88_02770 IPR040442 Pyruvate kinase-like domain superfamily JHS88_02775 IPR000644 CBS domain JHS88_02785 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily JHS88_02785 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA JHS88_02785 IPR042118 QueA, domain 1 JHS88_02785 IPR042119 QueA, domain 2 JHS88_02790 IPR002616 tRNA-guanine(15) transglycosylase-like JHS88_02790 IPR036511 Queuine tRNA-ribosyltransferase-like JHS88_02790 IPR004803 tRNA-guanine transglycosylase JHS88_02795 IPR003849 Preprotein translocase YajC JHS88_02800 IPR027398 SecD export protein N-terminal TM domain JHS88_02800 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial JHS88_02800 IPR022645 Protein-export membrane protein SecD/SecF, bacterial JHS88_02800 IPR005791 Protein translocase subunit SecD JHS88_02800 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site JHS88_02800 IPR001036 Acriflavin resistance protein JHS88_02805 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site JHS88_02805 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial JHS88_02805 IPR022645 Protein-export membrane protein SecD/SecF, bacterial JHS88_02805 IPR005665 Protein-export membrane protein SecF, bacterial JHS88_02810 IPR022337 Inositol monophosphatase, SuhB JHS88_02810 IPR020550 Inositol monophosphatase, conserved site JHS88_02810 IPR033942 Inositol monophosphatase JHS88_02810 IPR020583 Inositol monophosphatase, metal-binding site JHS88_02810 IPR000760 Inositol monophosphatase-like JHS88_02815 IPR004384 RNA methyltransferase TrmJ/LasT JHS88_02815 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JHS88_02815 IPR001537 tRNA/rRNA methyltransferase, SpoU type JHS88_02815 IPR029028 Alpha/beta knot methyltransferases JHS88_02820 IPR010242 Transcription factor HTH, IscR JHS88_02820 IPR030489 Transcription regulator Rrf2-type, conserved site JHS88_02820 IPR000944 Transcription regulator Rrf2-type JHS88_02820 IPR036390 Winged helix DNA-binding domain superfamily JHS88_02820 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_02825 IPR010240 Cysteine desulfurase IscS JHS88_02825 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JHS88_02825 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JHS88_02825 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site JHS88_02825 IPR000192 Aminotransferase class V domain JHS88_02825 IPR016454 Cysteine desulfurase JHS88_02825 IPR015424 Pyridoxal phosphate-dependent transferase JHS88_02830 IPR011339 ISC system FeS cluster assembly, IscU scaffold JHS88_02830 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal JHS88_02835 IPR016092 FeS cluster insertion protein JHS88_02835 IPR000361 FeS cluster biogenesis JHS88_02835 IPR011302 Iron-binding protein IscA, proteobacteria JHS88_02835 IPR035903 HesB-like domain superfamily JHS88_02835 IPR017870 FeS cluster insertion, C-terminal, conserved site JHS88_02840 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain JHS88_02840 IPR036869 Chaperone J-domain superfamily JHS88_02840 IPR036386 HscB, C-terminal domain superfamily JHS88_02840 IPR004640 Co-chaperone Hsc20 JHS88_02840 IPR001623 DnaJ domain JHS88_02845 IPR010236 ISC system FeS cluster assembly, HscA chaperone JHS88_02845 IPR013126 Heat shock protein 70 family JHS88_02845 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily JHS88_02845 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily JHS88_02845 IPR042039 HscA chaperone, nucleotide-binding domain JHS88_02845 IPR018181 Heat shock protein 70, conserved site JHS88_02850 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain JHS88_02850 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria JHS88_02850 IPR001055 Adrenodoxin JHS88_02850 IPR012675 Beta-grasp domain superfamily JHS88_02850 IPR036010 2Fe-2S ferredoxin-like superfamily JHS88_02850 IPR018298 Adrenodoxin, iron-sulphur binding site JHS88_02855 IPR007479 ISC system FeS cluster assembly, IscX JHS88_02855 IPR036762 IscX-like superfamily JHS88_02860 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B JHS88_02860 IPR008330 Peptidase M17, peptidase B JHS88_02860 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal JHS88_02860 IPR001346 Interferon regulatory factor DNA-binding domain JHS88_02865 IPR034907 Nucleoside diphosphate kinase-like domain JHS88_02865 IPR036850 Nucleoside diphosphate kinase-like domain superfamily JHS88_02865 IPR001564 Nucleoside diphosphate kinase JHS88_02865 IPR023005 Nucleoside diphosphate kinase, active site JHS88_02870 IPR013785 Aldolase-type TIM barrel JHS88_02870 IPR040072 Methyltransferase (Class A) JHS88_02870 IPR027492 Dual-specificity RNA methyltransferase RlmN JHS88_02870 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr JHS88_02870 IPR007197 Radical SAM JHS88_02875 IPR010982 Lambda repressor-like, DNA-binding domain superfamily JHS88_02875 IPR023690 Cytoskeleton protein RodZ JHS88_02875 IPR025194 Domain of unknown function DUF4115 JHS88_02875 IPR001387 Cro/C1-type helix-turn-helix domain JHS88_02880 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type JHS88_02880 IPR011005 Dihydropteroate synthase-like JHS88_02880 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial JHS88_02885 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain JHS88_02885 IPR015807 Histidine-tRNA ligase JHS88_02885 IPR036621 Anticodon-binding domain superfamily JHS88_02885 IPR004154 Anticodon-binding JHS88_02885 IPR006195 Aminoacyl-tRNA synthetase, class II JHS88_02885 IPR033656 Histidyl-anticodon-binding JHS88_02885 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit JHS88_02890 IPR026039 Uncharacterised protein family UPF0070 JHS88_02890 IPR018704 Tetratricopeptide repeat-like domain JHS88_02890 IPR011990 Tetratricopeptide-like helical domain superfamily JHS88_02895 IPR015943 WD40/YVTN repeat-like-containing domain superfamily JHS88_02895 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily JHS88_02895 IPR002372 Pyrrolo-quinoline quinone repeat JHS88_02895 IPR017687 Outer membrane protein assembly factor BamB JHS88_02895 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat JHS88_02900 IPR006073 GTP binding domain JHS88_02900 IPR032859 GTPase Der, C-terminal KH-domain-like JHS88_02900 IPR031166 EngA-type guanine nucleotide-binding (G) domain JHS88_02900 IPR003593 AAA+ ATPase domain JHS88_02900 IPR015946 K homology domain-like, alpha/beta JHS88_02900 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_02900 IPR005225 Small GTP-binding protein domain JHS88_02900 IPR016484 GTP-binding protein EngA JHS88_02915 IPR003753 Exonuclease VII, large subunit JHS88_02915 IPR020579 Exonuclease VII, large subunit, C-terminal JHS88_02915 IPR025824 OB-fold nucleic acid binding domain JHS88_02920 IPR015875 IMP dehydrogenase / GMP reductase, conserved site JHS88_02920 IPR001093 IMP dehydrogenase/GMP reductase JHS88_02920 IPR013785 Aldolase-type TIM barrel JHS88_02920 IPR000644 CBS domain JHS88_02920 IPR005990 Inosine-5'-monophosphate dehydrogenase JHS88_02925 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JHS88_02925 IPR022310 NAD/GMP synthase JHS88_02925 IPR022955 GMP synthase JHS88_02925 IPR004739 GMP synthase, glutamine amidotransferase JHS88_02925 IPR001674 GMP synthase, C-terminal JHS88_02925 IPR017926 Glutamine amidotransferase JHS88_02925 IPR029062 Class I glutamine amidotransferase-like JHS88_02925 IPR025777 GMP synthetase ATP pyrophosphatase domain JHS88_02930 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal JHS88_02935 IPR011583 Chitinase II JHS88_02935 IPR009470 Chitinase, C-terminal JHS88_02935 IPR036573 Carbohydrate-binding module superfamily 5/12 JHS88_02935 IPR003610 Carbohydrate-binding module family 5/12 JHS88_02935 IPR029070 Chitinase insertion domain superfamily JHS88_02935 IPR001223 Glycoside hydrolase family 18, catalytic domain JHS88_02935 IPR017853 Glycoside hydrolase superfamily JHS88_02935 IPR013783 Immunoglobulin-like fold JHS88_02940 IPR000791 Acetate transporter GPR1/FUN34/SatP family JHS88_02950 IPR001463 Sodium:alanine symporter JHS88_02955 IPR023080 D-amino acid dehydrogenase DadA JHS88_02955 IPR006076 FAD dependent oxidoreductase JHS88_02955 IPR036188 FAD/NAD(P)-binding domain superfamily JHS88_02960 IPR000847 Transcription regulator HTH, LysR JHS88_02960 IPR037418 HTH-type transcriptional regulator TrpI, PBP2 JHS88_02960 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_02960 IPR036390 Winged helix DNA-binding domain superfamily JHS88_02960 IPR005119 LysR, substrate-binding JHS88_02975 IPR033932 YtcJ like JHS88_02975 IPR032466 Metal-dependent hydrolase JHS88_02975 IPR013108 Amidohydrolase 3 JHS88_02975 IPR011059 Metal-dependent hydrolase, composite domain superfamily JHS88_02980 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme JHS88_02980 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase JHS88_02980 IPR015424 Pyridoxal phosphate-dependent transferase JHS88_02980 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JHS88_02980 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JHS88_02985 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JHS88_02985 IPR005814 Aminotransferase class-III JHS88_02985 IPR015424 Pyridoxal phosphate-dependent transferase JHS88_02985 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JHS88_03005 IPR016181 Acyl-CoA N-acyltransferase JHS88_03005 IPR000182 GNAT domain JHS88_03005 IPR001110 Uncharacterised protein family UPF0012, conserved site JHS88_03005 IPR036526 Carbon-nitrogen hydrolase superfamily JHS88_03005 IPR003010 Carbon-nitrogen hydrolase JHS88_03010 IPR000847 Transcription regulator HTH, LysR JHS88_03010 IPR005119 LysR, substrate-binding JHS88_03010 IPR036390 Winged helix DNA-binding domain superfamily JHS88_03010 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_03055 IPR011010 DNA breaking-rejoining enzyme, catalytic core JHS88_03055 IPR013762 Integrase-like, catalytic domain superfamily JHS88_03055 IPR004107 Integrase, SAM-like, N-terminal JHS88_03055 IPR002104 Integrase, catalytic domain JHS88_03055 IPR010998 Integrase/recombinase, N-terminal JHS88_03065 IPR023620 Small protein B JHS88_03065 IPR000037 SsrA-binding protein JHS88_03065 IPR020081 SsrA-binding protein, conserved site JHS88_03070 IPR005031 Coenzyme Q-binding protein COQ10, START domain JHS88_03070 IPR023393 START-like domain superfamily JHS88_03075 IPR037021 RnfH superfamily JHS88_03075 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp JHS88_03075 IPR005346 RnfH protein JHS88_03080 IPR026592 Outer membrane protein assembly factor BamE JHS88_03080 IPR007450 Lipoprotein SmpA/OmlA JHS88_03080 IPR037873 BamE-like JHS88_03085 IPR004604 DNA recombination/repair protein RecN JHS88_03085 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_03085 IPR003395 RecF/RecN/SMC, N-terminal JHS88_03095 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal JHS88_03095 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal JHS88_03095 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily JHS88_03095 IPR002504 NAD kinase JHS88_03100 IPR009012 GrpE nucleotide exchange factor, head JHS88_03100 IPR000740 GrpE nucleotide exchange factor JHS88_03100 IPR013805 GrpE nucleotide exchange factor, coiled-coil JHS88_03105 IPR023954 C4-dicarboxylate transport protein JHS88_03105 IPR018107 Sodium:dicarboxylate symporter, conserved site JHS88_03105 IPR036458 Sodium:dicarboxylate symporter superfamily JHS88_03105 IPR001991 Sodium:dicarboxylate symporter JHS88_03110 IPR012725 Chaperone DnaK JHS88_03110 IPR018181 Heat shock protein 70, conserved site JHS88_03110 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily JHS88_03110 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily JHS88_03110 IPR013126 Heat shock protein 70 family JHS88_03115 IPR012724 Chaperone DnaJ JHS88_03115 IPR002939 Chaperone DnaJ, C-terminal JHS88_03115 IPR001623 DnaJ domain JHS88_03115 IPR018253 DnaJ domain, conserved site JHS88_03115 IPR008971 HSP40/DnaJ peptide-binding JHS88_03115 IPR001305 Heat shock protein DnaJ, cysteine-rich domain JHS88_03115 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily JHS88_03115 IPR036869 Chaperone J-domain superfamily JHS88_03120 IPR012902 Prokaryotic N-terminal methylation site JHS88_03120 IPR001082 Fimbrial protein pilin JHS88_03125 IPR001082 Fimbrial protein pilin JHS88_03125 IPR012902 Prokaryotic N-terminal methylation site JHS88_03145 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT JHS88_03145 IPR011540 AbgT, Proteobacteria JHS88_03150 IPR016192 APOBEC/CMP deaminase, zinc-binding JHS88_03150 IPR002125 Cytidine and deoxycytidylate deaminase domain JHS88_03150 IPR016193 Cytidine deaminase-like JHS88_03150 IPR028883 tRNA-specific adenosine deaminase JHS88_03155 IPR023346 Lysozyme-like domain superfamily JHS88_03155 IPR023703 Membrane-bound lytic murein transglycosylase F JHS88_03155 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JHS88_03155 IPR000189 Prokaryotic transglycosylase, active site JHS88_03155 IPR008258 Transglycosylase SLT domain 1 JHS88_03160 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain JHS88_03160 IPR010073 Phosphoribosylformylglycinamidine synthase PurL JHS88_03160 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily JHS88_03160 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal JHS88_03160 IPR029062 Class I glutamine amidotransferase-like JHS88_03160 IPR017926 Glutamine amidotransferase JHS88_03160 IPR036676 PurM-like, C-terminal domain superfamily JHS88_03160 IPR010918 PurM-like, C-terminal domain JHS88_03160 IPR036921 PurM-like, N-terminal domain superfamily JHS88_03185 IPR002933 Peptidase M20 JHS88_03185 IPR001160 Peptidase M20C, Xaa-His dipeptidase JHS88_03185 IPR011650 Peptidase M20, dimerisation domain JHS88_03190 IPR026033 Azaguanine-like transporters JHS88_03190 IPR006043 Xanthine/uracil/vitamin C permease JHS88_03195 IPR000836 Phosphoribosyltransferase domain JHS88_03195 IPR029057 Phosphoribosyltransferase-like JHS88_03195 IPR023747 Xanthine-guanine phosphoribosyltransferase JHS88_03200 IPR010520 UPF0255 family JHS88_03200 IPR029058 Alpha/Beta hydrolase fold JHS88_03205 IPR038208 Sigma factor-binding protein Crl superfamily JHS88_03205 IPR009986 Sigma factor-binding transcriptional regulator Crl JHS88_03210 IPR036393 Acetylglutamate kinase-like superfamily JHS88_03210 IPR001048 Aspartate/glutamate/uridylate kinase JHS88_03210 IPR041739 Glutamate-5-kinase domain JHS88_03210 IPR001057 Glutamate/acetylglutamate kinase JHS88_03210 IPR011529 Glutamate 5-kinase JHS88_03210 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase JHS88_03210 IPR019797 Glutamate 5-kinase, conserved site JHS88_03210 IPR002478 PUA domain JHS88_03210 IPR015947 PUA-like superfamily JHS88_03210 IPR036974 PUA domain superfamily JHS88_03215 IPR016161 Aldehyde/histidinol dehydrogenase JHS88_03215 IPR016163 Aldehyde dehydrogenase, C-terminal JHS88_03215 IPR016162 Aldehyde dehydrogenase, N-terminal JHS88_03215 IPR015590 Aldehyde dehydrogenase domain JHS88_03215 IPR000965 GPR domain JHS88_03215 IPR012134 Glutamate-5-semialdehyde dehydrogenase JHS88_03215 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site JHS88_03220 IPR005144 ATP-cone domain JHS88_03220 IPR003796 Ribonucleotide reductase regulator NrdR-like JHS88_03225 IPR016193 Cytidine deaminase-like JHS88_03225 IPR011549 Riboflavin-specific deaminase, C-terminal JHS88_03225 IPR004794 Riboflavin biosynthesis protein RibD JHS88_03225 IPR024072 Dihydrofolate reductase-like domain superfamily JHS88_03225 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal JHS88_03225 IPR002125 Cytidine and deoxycytidylate deaminase domain JHS88_03225 IPR016192 APOBEC/CMP deaminase, zinc-binding JHS88_03230 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily JHS88_03230 IPR001783 Lumazine-binding protein JHS88_03230 IPR026017 Lumazine-binding domain JHS88_03230 IPR017938 Riboflavin synthase-like beta-barrel JHS88_03235 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily JHS88_03235 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB JHS88_03235 IPR032677 GTP cyclohydrolase II JHS88_03235 IPR036144 RibA-like superfamily JHS88_03240 IPR002180 Lumazine/riboflavin synthase JHS88_03240 IPR034964 Lumazine synthase JHS88_03240 IPR036467 Lumazine/riboflavin synthase superfamily JHS88_03245 IPR035926 NusB-like superfamily JHS88_03245 IPR011605 NusB antitermination factor JHS88_03245 IPR006027 NusB/RsmB/TIM44 JHS88_03250 IPR036676 PurM-like, C-terminal domain superfamily JHS88_03250 IPR016188 PurM-like, N-terminal domain JHS88_03250 IPR036921 PurM-like, N-terminal domain superfamily JHS88_03250 IPR006283 Thiamine-monophosphate kinase JHS88_03250 IPR010918 PurM-like, C-terminal domain JHS88_03255 IPR036681 PgpA-like superfamily JHS88_03255 IPR026037 Phosphatidylglycerophosphatase A JHS88_03255 IPR007686 YutG/PgpA domain JHS88_03260 IPR033248 Transketolase, C-terminal domain JHS88_03260 IPR020826 Transketolase binding site JHS88_03260 IPR005475 Transketolase-like, pyrimidine-binding domain JHS88_03260 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II JHS88_03260 IPR005477 Deoxyxylulose-5-phosphate synthase JHS88_03260 IPR005474 Transketolase, N-terminal JHS88_03260 IPR029061 Thiamin diphosphate-binding fold JHS88_03265 IPR000092 Polyprenyl synthetase JHS88_03265 IPR033749 Polyprenyl synthetase, conserved site JHS88_03265 IPR008949 Isoprenoid synthase domain superfamily JHS88_03270 IPR003761 Exonuclease VII, small subunit JHS88_03270 IPR037004 Exonuclease VII, small subunit superfamily JHS88_03275 IPR002898 MotA/TolQ/ExbB proton channel JHS88_03275 IPR000540 Flagellar motor protein MotA, conserved site JHS88_03280 IPR006690 Outer membrane protein, OmpA-like, conserved site JHS88_03280 IPR006665 OmpA-like domain JHS88_03280 IPR006664 Outer membrane protein, bacterial JHS88_03280 IPR036737 OmpA-like domain superfamily JHS88_03285 IPR001763 Rhodanese-like domain JHS88_03285 IPR026340 Thiazole biosynthesis domain JHS88_03285 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JHS88_03285 IPR036873 Rhodanese-like domain superfamily JHS88_03285 IPR020536 Thil, AANH domain JHS88_03285 IPR004114 THUMP domain JHS88_03285 IPR003720 tRNA sulfurtransferase ThiI JHS88_03290 IPR000847 Transcription regulator HTH, LysR JHS88_03290 IPR036390 Winged helix DNA-binding domain superfamily JHS88_03290 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_03290 IPR005119 LysR, substrate-binding JHS88_03300 IPR006696 Protein of unknown function DUF423 JHS88_03305 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_03305 IPR011224 Ribosomal RNA large subunit methyltransferase M JHS88_03305 IPR002877 Ribosomal RNA methyltransferase FtsJ domain JHS88_03305 IPR040739 RlmM ferredoxin-like domain JHS88_03310 IPR001604 DNA/RNA non-specific endonuclease JHS88_03310 IPR020821 Extracellular Endonuclease, subunit A JHS88_03310 IPR040255 Non-specific endonuclease JHS88_03310 IPR018524 DNA/RNA non-specific endonuclease, active site JHS88_03315 IPR022895 Flap endonuclease Xni JHS88_03315 IPR008918 Helix-hairpin-helix motif, class 2 JHS88_03315 IPR038969 Flap endonuclease JHS88_03315 IPR020045 DNA polymerase I-like, H3TH domain JHS88_03315 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal JHS88_03315 IPR036279 5'-3' exonuclease, C-terminal domain superfamily JHS88_03315 IPR029060 PIN-like domain superfamily JHS88_03315 IPR002421 5'-3' exonuclease, N-terminal JHS88_03320 IPR021826 Domain of unknown function DUF3412 JHS88_03320 IPR031100 LOG family JHS88_03320 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily JHS88_03320 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal JHS88_03325 IPR000160 GGDEF domain JHS88_03325 IPR029787 Nucleotide cyclase JHS88_03335 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 JHS88_03335 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal JHS88_03335 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF JHS88_03340 IPR038228 Syd superfamily JHS88_03340 IPR009948 Syd JHS88_03345 IPR016908 Uncharacterised conserved protein UCP029037 JHS88_03350 IPR004872 Lipoprotein NlpA family JHS88_03355 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JHS88_03355 IPR035906 MetI-like superfamily JHS88_03360 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_03360 IPR018449 NIL domain JHS88_03360 IPR003593 AAA+ ATPase domain JHS88_03360 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal JHS88_03360 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain JHS88_03360 IPR017871 ABC transporter, conserved site JHS88_03360 IPR003439 ABC transporter-like JHS88_03360 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria JHS88_03360 IPR026253 Methionine import ATP-binding protein MetN JHS88_03365 IPR006543 Histidinol-phosphate phosphatase JHS88_03365 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase JHS88_03365 IPR006549 HAD-superfamily hydrolase,subfamily IIIA JHS88_03365 IPR036412 HAD-like superfamily JHS88_03365 IPR023214 HAD superfamily JHS88_03370 IPR000843 LacI-type HTH domain JHS88_03370 IPR010982 Lambda repressor-like, DNA-binding domain superfamily JHS88_03370 IPR028082 Periplasmic binding protein-like I JHS88_03370 IPR012771 Trehalose operon repressor JHS88_03375 IPR011296 Phosphotransferase system, trehalose-specific IIBC component JHS88_03375 IPR001996 Phosphotransferase system, IIB component, type 1 JHS88_03375 IPR036878 Glucose permease domain IIB JHS88_03375 IPR003352 Phosphotransferase system, EIIC JHS88_03375 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site JHS88_03375 IPR013013 Phosphotransferase system, EIIC component, type 1 JHS88_03375 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component JHS88_03380 IPR006047 Glycosyl hydrolase, family 13, catalytic domain JHS88_03380 IPR012769 Trehalose-6-phosphate hydrolase JHS88_03380 IPR032091 Maltogenic Amylase, C-terminal JHS88_03380 IPR017853 Glycoside hydrolase superfamily JHS88_03380 IPR013780 Glycosyl hydrolase, all-beta JHS88_03395 IPR003740 Uncharacterised membrane protein YitT JHS88_03395 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal JHS88_03395 IPR019264 Domain of unknown function DUF2179 JHS88_03400 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site JHS88_03400 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JHS88_03400 IPR039429 Serine hydroxymethyltransferase-like domain JHS88_03400 IPR015424 Pyridoxal phosphate-dependent transferase JHS88_03400 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JHS88_03400 IPR001085 Serine hydroxymethyltransferase JHS88_03405 IPR013785 Aldolase-type TIM barrel JHS88_03405 IPR006638 Elp3/MiaB/NifB JHS88_03405 IPR031691 Lipoyl synthase, N-terminal JHS88_03405 IPR003698 Lipoyl synthase JHS88_03405 IPR007197 Radical SAM JHS88_03410 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain JHS88_03410 IPR000544 Octanoyltransferase JHS88_03410 IPR020605 Octanoyltransferase, conserved site JHS88_03415 IPR007454 Uncharacterised protein family UPF0250 JHS88_03415 IPR027471 YbeD-like domain superfamily JHS88_03420 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily JHS88_03420 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal JHS88_03420 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal JHS88_03420 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A JHS88_03420 IPR015956 Penicillin-binding protein, C-terminal domain superfamily JHS88_03420 IPR012338 Beta-lactamase/transpeptidase-like JHS88_03425 IPR034718 Endolytic peptidoglycan transglycosylase RlpA JHS88_03425 IPR009009 RlpA-like protein, double-psi beta-barrel domain JHS88_03425 IPR036908 RlpA-like domain superfamily JHS88_03425 IPR012997 Rare lipoprotein A JHS88_03425 IPR007730 Sporulation-like domain JHS88_03425 IPR036680 Sporulation-like domain superfamily JHS88_03430 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB JHS88_03430 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site JHS88_03430 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA JHS88_03435 IPR017790 Penicillin-binding protein 2 JHS88_03435 IPR012338 Beta-lactamase/transpeptidase-like JHS88_03435 IPR005311 Penicillin-binding protein, dimerisation domain JHS88_03435 IPR036138 Penicillin-binding protein, dimerisation domain superfamily JHS88_03435 IPR001460 Penicillin-binding protein, transpeptidase JHS88_03440 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JHS88_03440 IPR003742 RNA methyltransferase RlmH JHS88_03440 IPR029028 Alpha/beta knot methyltransferases JHS88_03445 IPR004394 Protein Iojap/ribosomal silencing factor RsfS JHS88_03450 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal JHS88_03450 IPR032780 DNA polymerase III subunit delta, C-terminal JHS88_03450 IPR010372 DNA polymerase III delta, N-terminal JHS88_03450 IPR005790 DNA polymerase III, delta subunit JHS88_03450 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_03455 IPR007485 LPS-assembly lipoprotein LptE JHS88_03460 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain JHS88_03460 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding JHS88_03460 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding JHS88_03460 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JHS88_03460 IPR002302 Leucine-tRNA ligase JHS88_03460 IPR002300 Aminoacyl-tRNA synthetase, class Ia JHS88_03460 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site JHS88_03460 IPR025709 Leucyl-tRNA synthetase, editing domain JHS88_03465 IPR009912 Zinc-ribbon containing domain JHS88_03470 IPR004563 Apolipoprotein N-acyltransferase JHS88_03470 IPR003010 Carbon-nitrogen hydrolase JHS88_03470 IPR036526 Carbon-nitrogen hydrolase superfamily JHS88_03475 IPR005170 Transporter-associated domain JHS88_03475 IPR000644 CBS domain JHS88_03475 IPR036318 FAD-binding, type PCMH-like superfamily JHS88_03475 IPR016169 FAD-binding, type PCMH, subdomain 2 JHS88_03480 IPR020549 Endoribonuclease YbeY, conserved site JHS88_03480 IPR002036 Endoribonuclease YbeY JHS88_03480 IPR023091 Metalloprotease catalytic domain superfamily, predicted JHS88_03485 IPR003714 PhoH-like protein JHS88_03485 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_03490 IPR005839 Methylthiotransferase JHS88_03490 IPR020612 Methylthiotransferase, conserved site JHS88_03490 IPR038135 Methylthiotransferase, N-terminal domain superfamily JHS88_03490 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB JHS88_03490 IPR007197 Radical SAM JHS88_03490 IPR006638 Elp3/MiaB/NifB JHS88_03490 IPR013848 Methylthiotransferase, N-terminal JHS88_03490 IPR002792 TRAM domain JHS88_03490 IPR023404 Radical SAM, alpha/beta horseshoe JHS88_03495 IPR002938 FAD-binding domain JHS88_03495 IPR036188 FAD/NAD(P)-binding domain superfamily JHS88_03495 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site JHS88_03495 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 JHS88_03610 IPR041706 YchF, N-terminal JHS88_03610 IPR013029 YchF, C-terminal domain JHS88_03610 IPR023192 TGS-like domain superfamily JHS88_03610 IPR012676 TGS-like JHS88_03610 IPR004095 TGS JHS88_03610 IPR006073 GTP binding domain JHS88_03610 IPR031167 OBG-type guanine nucleotide-binding (G) domain JHS88_03610 IPR012675 Beta-grasp domain superfamily JHS88_03610 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 JHS88_03610 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_03615 IPR001328 Peptidyl-tRNA hydrolase JHS88_03615 IPR018171 Peptidyl-tRNA hydrolase, conserved site JHS88_03615 IPR036416 Peptidyl-tRNA hydrolase superfamily JHS88_03620 IPR005946 Ribose-phosphate pyrophosphokinase JHS88_03620 IPR000836 Phosphoribosyltransferase domain JHS88_03620 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site JHS88_03620 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain JHS88_03620 IPR029057 Phosphoribosyltransferase-like JHS88_03620 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type JHS88_03625 IPR013750 GHMP kinase, C-terminal domain JHS88_03625 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JHS88_03625 IPR020568 Ribosomal protein S5 domain 2-type fold JHS88_03625 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase JHS88_03625 IPR006204 GHMP kinase N-terminal domain JHS88_03625 IPR036554 GHMP kinase, C-terminal domain superfamily JHS88_03630 IPR004565 Outer membrane lipoprotein LolB JHS88_03630 IPR029046 Lipoprotein localisation LolA/LolB/LppX JHS88_03635 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain JHS88_03635 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase JHS88_03635 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal JHS88_03635 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase JHS88_03635 IPR036291 NAD(P)-binding domain superfamily JHS88_03635 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily JHS88_03635 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily JHS88_03635 IPR018214 Glutamyl-tRNA reductase, conserved site JHS88_03640 IPR004373 Peptide chain release factor 1 JHS88_03640 IPR000352 Peptide chain release factor class I JHS88_03640 IPR005139 Peptide chain release factor JHS88_03645 IPR025714 Methyltransferase domain JHS88_03645 IPR002052 DNA methylase, N-6 adenine-specific, conserved site JHS88_03645 IPR004556 Methyltransferase HemK-like JHS88_03645 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific JHS88_03645 IPR040758 Release factor glutamine methyltransferase, N-terminal domain JHS88_03645 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_03650 IPR007360 Invasion gene expression up-regulator, SirB JHS88_03655 IPR032698 Protein SirB1, N-terminal JHS88_03655 IPR011990 Tetratricopeptide-like helical domain superfamily JHS88_03660 IPR013785 Aldolase-type TIM barrel JHS88_03660 IPR006218 DAHP synthetase I/KDSA JHS88_03660 IPR006269 3-deoxy-8-phosphooctulonate synthase JHS88_03665 IPR006146 5'-Nucleotidase, conserved site JHS88_03665 IPR006179 5'-Nucleotidase/apyrase JHS88_03665 IPR029052 Metallo-dependent phosphatase-like JHS88_03665 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type JHS88_03665 IPR036907 5'-Nucleotidase, C-terminal domain superfamily JHS88_03665 IPR008334 5'-Nucleotidase, C-terminal JHS88_03670 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily JHS88_03670 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain JHS88_03670 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC JHS88_03675 IPR002942 RNA-binding S4 domain JHS88_03675 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain JHS88_03675 IPR020103 Pseudouridine synthase, catalytic domain superfamily JHS88_03675 IPR006145 Pseudouridine synthase, RsuA/RluA JHS88_03675 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F JHS88_03675 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site JHS88_03675 IPR036986 RNA-binding S4 domain superfamily JHS88_03680 IPR036063 Smr domain superfamily JHS88_03680 IPR002625 Smr domain JHS88_03700 IPR014756 Immunoglobulin E-set JHS88_03700 IPR013783 Immunoglobulin-like fold JHS88_03700 IPR029018 Beta-hexosaminidase-like, domain 2 JHS88_03700 IPR017853 Glycoside hydrolase superfamily JHS88_03700 IPR015883 Glycoside hydrolase family 20, catalytic domain JHS88_03700 IPR004867 Chitobiase C-terminal domain JHS88_03700 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain JHS88_03700 IPR012291 CBM2, carbohydrate-binding domain superfamily JHS88_03700 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily JHS88_03700 IPR025705 Beta-hexosaminidase JHS88_03700 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal JHS88_03715 IPR023299 P-type ATPase, cytoplasmic domain N JHS88_03715 IPR018303 P-type ATPase, phosphorylation site JHS88_03715 IPR027256 P-type ATPase, subfamily IB JHS88_03715 IPR023298 P-type ATPase, transmembrane domain superfamily JHS88_03715 IPR008250 P-type ATPase, A domain superfamily JHS88_03715 IPR036412 HAD-like superfamily JHS88_03715 IPR023214 HAD superfamily JHS88_03715 IPR001757 P-type ATPase JHS88_03715 IPR017969 Heavy-metal-associated, conserved site JHS88_03715 IPR036163 Heavy metal-associated domain superfamily JHS88_03715 IPR006121 Heavy metal-associated domain, HMA JHS88_03720 IPR033900 Porin domain, Gram-negative type JHS88_03720 IPR023614 Porin domain superfamily JHS88_03720 IPR001702 Porin, Gram-negative type JHS88_03720 IPR002299 Porin, Neisseria sp. type JHS88_03725 IPR018635 Uncharacterised protein family UPF0319 JHS88_03730 IPR033910 Glutamyl-tRNA synthetase JHS88_03730 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain JHS88_03730 IPR000924 Glutamyl/glutaminyl-tRNA synthetase JHS88_03730 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial JHS88_03730 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site JHS88_03730 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding JHS88_03730 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JHS88_03730 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 JHS88_03735 IPR000498 Outer membrane protein OmpA-like, transmembrane domain JHS88_03735 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel JHS88_03735 IPR006665 OmpA-like domain JHS88_03735 IPR002368 Outer membrane protein, OmpA JHS88_03735 IPR006664 Outer membrane protein, bacterial JHS88_03735 IPR036737 OmpA-like domain superfamily JHS88_03735 IPR006690 Outer membrane protein, OmpA-like, conserved site JHS88_03780 IPR011006 CheY-like superfamily JHS88_03780 IPR036061 CheW-like domain superfamily JHS88_03780 IPR024181 Chemotaxis response regulator CheV JHS88_03780 IPR001789 Signal transduction response regulator, receiver domain JHS88_03780 IPR002545 CheW-like domain JHS88_03785 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_03785 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily JHS88_03785 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal JHS88_03785 IPR000780 MCP methyltransferase, CheR-type JHS88_03785 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal JHS88_03790 IPR006300 Flagellar basal-body rod protein FlgB JHS88_03790 IPR019776 Flagellar basal body rod protein, conserved site JHS88_03790 IPR001444 Flagellar basal body rod protein, N-terminal JHS88_03795 IPR006299 Flagellar basal-body rod protein FlgC JHS88_03795 IPR010930 Flagellar basal-body/hook protein, C-terminal domain JHS88_03795 IPR019776 Flagellar basal body rod protein, conserved site JHS88_03795 IPR001444 Flagellar basal body rod protein, N-terminal JHS88_03800 IPR025963 FlgD Tudor-like domain JHS88_03800 IPR025965 FlgD Ig-like domain JHS88_03800 IPR005648 Flagellar hook capping protein JHS88_03805 IPR019776 Flagellar basal body rod protein, conserved site JHS88_03805 IPR020013 Flagellar hook-basal body protein, FlgE/F/G JHS88_03805 IPR010930 Flagellar basal-body/hook protein, C-terminal domain JHS88_03805 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like JHS88_03805 IPR011491 Flagellar hook protein FlgE JHS88_03805 IPR001444 Flagellar basal body rod protein, N-terminal JHS88_03805 IPR037058 Flagellar hook protein FlgE superfamily JHS88_03810 IPR001444 Flagellar basal body rod protein, N-terminal JHS88_03810 IPR019776 Flagellar basal body rod protein, conserved site JHS88_03810 IPR020013 Flagellar hook-basal body protein, FlgE/F/G JHS88_03810 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like JHS88_03810 IPR010930 Flagellar basal-body/hook protein, C-terminal domain JHS88_03815 IPR020013 Flagellar hook-basal body protein, FlgE/F/G JHS88_03815 IPR019776 Flagellar basal body rod protein, conserved site JHS88_03815 IPR001444 Flagellar basal body rod protein, N-terminal JHS88_03815 IPR012834 Flagellar basal-body rod FlgG JHS88_03815 IPR010930 Flagellar basal-body/hook protein, C-terminal domain JHS88_03815 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like JHS88_03820 IPR000527 Flagellar L-ring protein JHS88_03825 IPR001782 Flagellar P-ring protein JHS88_03830 IPR013377 Peptidoglycan hydrolase FlgJ JHS88_03830 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain JHS88_03830 IPR019301 Flagellar protein FlgJ, N-terminal JHS88_03835 IPR010810 Flagellin hook, IN motif JHS88_03835 IPR010930 Flagellar basal-body/hook protein, C-terminal domain JHS88_03835 IPR002371 Flagellar hook-associated protein 1 JHS88_03840 IPR013384 Flagellar hook-associated protein 3 JHS88_03840 IPR001029 Flagellin, D0/D1 domain JHS88_03845 IPR010810 Flagellin hook, IN motif JHS88_03845 IPR001029 Flagellin, D0/D1 domain JHS88_03845 IPR042187 Flagellin, C-terminal domain, subdomain 2 JHS88_03845 IPR001492 Flagellin JHS88_03850 IPR042187 Flagellin, C-terminal domain, subdomain 2 JHS88_03850 IPR001029 Flagellin, D0/D1 domain JHS88_03850 IPR010810 Flagellin hook, IN motif JHS88_03850 IPR001492 Flagellin JHS88_03855 IPR001492 Flagellin JHS88_03855 IPR001029 Flagellin, D0/D1 domain JHS88_03855 IPR010810 Flagellin hook, IN motif JHS88_03860 IPR011055 Duplicated hybrid motif JHS88_03860 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 JHS88_03865 IPR023151 PEP-utilising enzyme, conserved site JHS88_03865 IPR024692 Phosphotransferase system, enzyme I JHS88_03865 IPR000121 PEP-utilising enzyme, C-terminal JHS88_03865 IPR036637 Phosphohistidine domain superfamily JHS88_03865 IPR018274 PEP-utilising enzyme, active site JHS88_03865 IPR008279 PEP-utilising enzyme, mobile domain JHS88_03865 IPR006318 Phosphotransferase system, enzyme I-like JHS88_03865 IPR040442 Pyruvate kinase-like domain superfamily JHS88_03865 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily JHS88_03865 IPR036618 PtsI, HPr-binding domain superfamily JHS88_03865 IPR008731 Phosphotransferase system, enzyme I N-terminal JHS88_03870 IPR002114 Phosphotransferase system, HPr serine phosphorylation site JHS88_03870 IPR035895 HPr-like superfamily JHS88_03870 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site JHS88_03870 IPR000032 Phosphocarrier protein HPr-like JHS88_03875 IPR005856 Cysteine synthase JHS88_03875 IPR005859 Cysteine synthase CysK JHS88_03875 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site JHS88_03875 IPR001926 Pyridoxal-phosphate dependent enzyme JHS88_03875 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme JHS88_03880 IPR022985 Sulfate transporter CysZ JHS88_03885 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily JHS88_03885 IPR007449 ZipA, C-terminal FtsZ-binding domain JHS88_03885 IPR011919 Cell division protein ZipA JHS88_03890 IPR004150 NAD-dependent DNA ligase, OB-fold JHS88_03890 IPR010994 RuvA domain 2-like JHS88_03890 IPR036420 BRCT domain superfamily JHS88_03890 IPR041663 DisA/LigA, helix-hairpin-helix motif JHS88_03890 IPR018239 NAD-dependent DNA ligase, active site JHS88_03890 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type JHS88_03890 IPR033136 NAD-dependent DNA ligase, conserved site JHS88_03890 IPR001357 BRCT domain JHS88_03890 IPR013839 NAD-dependent DNA ligase, adenylation JHS88_03890 IPR013840 NAD-dependent DNA ligase, N-terminal JHS88_03890 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 JHS88_03890 IPR012340 Nucleic acid-binding, OB-fold JHS88_03890 IPR001679 NAD-dependent DNA ligase JHS88_03895 IPR005318 Outer membrane porin, bacterial JHS88_03895 IPR023614 Porin domain superfamily JHS88_03910 IPR036013 Band 7/SPFH domain superfamily JHS88_03910 IPR018080 Band 7/stomatin-like, conserved site JHS88_03910 IPR032435 Band 7, C-terminal extension JHS88_03910 IPR001972 Stomatin family JHS88_03910 IPR001107 Band 7 domain JHS88_03915 IPR011990 Tetratricopeptide-like helical domain superfamily JHS88_03915 IPR013766 Thioredoxin domain JHS88_03915 IPR036249 Thioredoxin-like superfamily JHS88_03920 IPR002347 Short-chain dehydrogenase/reductase SDR JHS88_03920 IPR020904 Short-chain dehydrogenase/reductase, conserved site JHS88_03920 IPR036291 NAD(P)-binding domain superfamily JHS88_03925 IPR010099 Epimerase family protein SDR39U1 JHS88_03925 IPR036291 NAD(P)-binding domain superfamily JHS88_03925 IPR001509 NAD-dependent epimerase/dehydratase JHS88_03925 IPR013549 Domain of unknown function DUF1731 JHS88_03930 IPR011435 Na(+), Li(+), K(+)/H(+) antiporter subunit A/B JHS88_03935 IPR011435 Na(+), Li(+), K(+)/H(+) antiporter subunit A/B JHS88_03950 IPR000979 Phosphodiesterase MJ0936/Vps29 JHS88_03950 IPR020935 Phosphodiesterase YfcE, conserved site JHS88_03950 IPR024654 Calcineurin-like phosphoesterase domain, lpxH-type JHS88_03950 IPR029052 Metallo-dependent phosphatase-like JHS88_03950 IPR041802 YfcE-like, metallophosphatase domain JHS88_03965 IPR035288 Trans-membrane regulatory protein ToxS JHS88_03970 IPR001867 OmpR/PhoB-type DNA-binding domain JHS88_03970 IPR016032 Signal transduction response regulator, C-terminal effector JHS88_03970 IPR039420 Transcriptional regulatory protein WalR-like JHS88_03970 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_03975 IPR020568 Ribosomal protein S5 domain 2-type fold JHS88_03975 IPR020575 Heat shock protein Hsp90, N-terminal JHS88_03975 IPR001404 Heat shock protein Hsp90 family JHS88_03975 IPR019805 Heat shock protein Hsp90, conserved site JHS88_03975 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_03975 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_03975 IPR037196 HSP90, C-terminal domain JHS88_03980 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_03980 IPR006259 Adenylate kinase subfamily JHS88_03980 IPR000850 Adenylate kinase/UMP-CMP kinase JHS88_03980 IPR033690 Adenylate kinase, conserved site JHS88_03980 IPR007862 Adenylate kinase, active site lid domain JHS88_03985 IPR001015 Ferrochelatase JHS88_03985 IPR019772 Ferrochelatase, active site JHS88_03985 IPR033644 Ferrochelatase, C-terminal JHS88_03985 IPR033659 Ferrochelatase, N-terminal JHS88_03990 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site JHS88_03990 IPR000109 Proton-dependent oligopeptide transporter family JHS88_03990 IPR005279 Dipeptide/tripeptide permease JHS88_03990 IPR020846 Major facilitator superfamily domain JHS88_03990 IPR036259 MFS transporter superfamily JHS88_03995 IPR006645 NusG, N-terminal JHS88_03995 IPR036735 NusG, N-terminal domain superfamily JHS88_03995 IPR010215 Transcription antitermination protein RfaH JHS88_04000 IPR006426 Asparagine synthase, glutamine-hydrolyzing JHS88_04000 IPR033738 Asparagine synthase, N-terminal domain JHS88_04000 IPR017932 Glutamine amidotransferase type 2 domain JHS88_04000 IPR029055 Nucleophile aminohydrolases, N-terminal JHS88_04000 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JHS88_04000 IPR001962 Asparagine synthase JHS88_04005 IPR006153 Cation/H+ exchanger JHS88_04005 IPR004771 K+/H+ exchanger JHS88_04005 IPR038770 Sodium/solute symporter superfamily JHS88_04005 IPR036291 NAD(P)-binding domain superfamily JHS88_04005 IPR003148 Regulator of K+ conductance, N-terminal JHS88_04010 IPR036390 Winged helix DNA-binding domain superfamily JHS88_04010 IPR000835 MarR-type HTH domain JHS88_04010 IPR000600 ROK family JHS88_04010 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_04015 IPR032466 Metal-dependent hydrolase JHS88_04015 IPR011059 Metal-dependent hydrolase, composite domain superfamily JHS88_04015 IPR003764 N-acetylglucosamine-6-phosphate deacetylase JHS88_04015 IPR006680 Amidohydrolase-related JHS88_04020 IPR001996 Phosphotransferase system, IIB component, type 1 JHS88_04020 IPR036878 Glucose permease domain IIB JHS88_04020 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site JHS88_04020 IPR003352 Phosphotransferase system, EIIC JHS88_04020 IPR013013 Phosphotransferase system, EIIC component, type 1 JHS88_04020 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component JHS88_04025 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal JHS88_04025 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily JHS88_04025 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily JHS88_04025 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JHS88_04025 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain JHS88_04025 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site JHS88_04025 IPR000924 Glutamyl/glutaminyl-tRNA synthetase JHS88_04025 IPR022861 Glutamine-tRNA ligase, bacterial JHS88_04025 IPR004514 Glutamine-tRNA synthetase JHS88_04025 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain JHS88_04030 IPR002481 Ferric-uptake regulator JHS88_04030 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_04030 IPR036390 Winged helix DNA-binding domain superfamily JHS88_04040 IPR008254 Flavodoxin/nitric oxide synthase JHS88_04040 IPR001226 Flavodoxin, conserved site JHS88_04040 IPR010086 Flavodoxin, long chain JHS88_04040 IPR029039 Flavoprotein-like superfamily JHS88_04050 IPR029058 Alpha/Beta hydrolase fold JHS88_04050 IPR000073 Alpha/beta hydrolase fold-1 JHS88_04055 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal JHS88_04055 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily JHS88_04055 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain JHS88_04055 IPR013321 Arc-type ribbon-helix-helix JHS88_04055 IPR010985 Ribbon-helix-helix JHS88_04055 IPR005621 Negative modulator of initiation of replication SeqA JHS88_04060 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I JHS88_04060 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III JHS88_04060 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II JHS88_04060 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III JHS88_04060 IPR005843 Alpha-D-phosphohexomutase, C-terminal JHS88_04060 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily JHS88_04060 IPR016066 Alpha-D-phosphohexomutase, conserved site JHS88_04060 IPR005852 Phosphoglucomutase, alpha-D-glucose specific JHS88_04070 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 JHS88_04070 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily JHS88_04075 IPR010953 Citrate synthase, type I JHS88_04075 IPR036969 Citrate synthase superfamily JHS88_04075 IPR024176 Citrate synthase, bacterial-type JHS88_04075 IPR016142 Citrate synthase-like, large alpha subdomain JHS88_04075 IPR002020 Citrate synthase JHS88_04075 IPR016143 Citrate synthase-like, small alpha subdomain JHS88_04075 IPR019810 Citrate synthase active site JHS88_04080 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit JHS88_04080 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site JHS88_04080 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit JHS88_04080 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit JHS88_04085 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit JHS88_04085 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor JHS88_04085 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit JHS88_04090 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit JHS88_04090 IPR011281 Succinate dehydrogenase, flavoprotein subunit JHS88_04090 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily JHS88_04090 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal JHS88_04090 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain JHS88_04090 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site JHS88_04090 IPR036188 FAD/NAD(P)-binding domain superfamily JHS88_04090 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily JHS88_04095 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JHS88_04095 IPR036010 2Fe-2S ferredoxin-like superfamily JHS88_04095 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain JHS88_04095 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JHS88_04095 IPR012675 Beta-grasp domain superfamily JHS88_04095 IPR009051 Alpha-helical ferredoxin JHS88_04095 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein JHS88_04095 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal JHS88_04100 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain JHS88_04100 IPR011603 2-oxoglutarate dehydrogenase E1 component JHS88_04100 IPR001017 Dehydrogenase, E1 component JHS88_04100 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal JHS88_04100 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily JHS88_04100 IPR029061 Thiamin diphosphate-binding fold JHS88_04100 IPR005475 Transketolase-like, pyrimidine-binding domain JHS88_04105 IPR006255 Dihydrolipoamide succinyltransferase JHS88_04105 IPR011053 Single hybrid motif JHS88_04105 IPR004167 Peripheral subunit-binding domain JHS88_04105 IPR036625 E3-binding domain superfamily JHS88_04105 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily JHS88_04105 IPR000089 Biotin/lipoyl attachment JHS88_04105 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain JHS88_04105 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site JHS88_04110 IPR011761 ATP-grasp fold JHS88_04110 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type JHS88_04110 IPR013815 ATP-grasp fold, subdomain 1 JHS88_04110 IPR005811 ATP-citrate lyase/succinyl-CoA ligase JHS88_04110 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site JHS88_04110 IPR005809 Succinate--CoA synthetase, beta subunit JHS88_04110 IPR016102 Succinyl-CoA synthetase-like JHS88_04115 IPR016102 Succinyl-CoA synthetase-like JHS88_04115 IPR036291 NAD(P)-binding domain superfamily JHS88_04115 IPR005810 Succinyl-CoA ligase, alpha subunit JHS88_04115 IPR005811 ATP-citrate lyase/succinyl-CoA ligase JHS88_04115 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site JHS88_04115 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site JHS88_04115 IPR003781 CoA-binding JHS88_04120 IPR037294 ABC transporter, BtuC-like JHS88_04120 IPR001626 ABC transporter, TroCD-like JHS88_04125 IPR003593 AAA+ ATPase domain JHS88_04125 IPR003439 ABC transporter-like JHS88_04125 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_04125 IPR017882 Zinc import ATP-binding protein ZnuC JHS88_04130 IPR006128 Adhesion lipoprotein JHS88_04130 IPR035520 High-affinity zinc uptake system protein ZnuA JHS88_04130 IPR006127 Periplasmic solute binding protein, ZnuA-like JHS88_04135 IPR023609 Transcription regulator HTH, RhaS JHS88_04135 IPR020449 Transcription regulator HTH, AraC- type JHS88_04135 IPR011051 RmlC-like cupin domain superfamily JHS88_04135 IPR014710 RmlC-like jelly roll fold JHS88_04135 IPR009057 Homeobox-like domain superfamily JHS88_04135 IPR003313 AraC-type arabinose-binding/dimerisation domain JHS88_04135 IPR018060 DNA binding HTH domain, AraC-type JHS88_04140 IPR007167 Ferrous iron transporter FeoA domain JHS88_04140 IPR038157 Ferrous iron transporter, core domain JHS88_04140 IPR008988 Transcriptional repressor, C-terminal JHS88_04145 IPR005225 Small GTP-binding protein domain JHS88_04145 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_04145 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain JHS88_04145 IPR030389 FeoB-type guanine nucleotide-binding (G) domain JHS88_04145 IPR011640 Ferrous iron transport protein B, C-terminal JHS88_04145 IPR003373 Ferrous iron transport protein B JHS88_04145 IPR041069 FeoB, cytosolic helical domain JHS88_04160 IPR035684 Arginyl-tRNA synthetase, catalytic core domain JHS88_04160 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding JHS88_04160 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JHS88_04160 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily JHS88_04160 IPR008909 DALR anticodon binding JHS88_04160 IPR001278 Arginine-tRNA ligase JHS88_04160 IPR005148 Arginyl tRNA synthetase N-terminal domain JHS88_04160 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site JHS88_04165 IPR010393 Protein of unknown function DUF991 JHS88_04165 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JHS88_04170 IPR002912 ACT domain JHS88_04170 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain JHS88_04170 IPR002376 Formyl transferase, N-terminal JHS88_04170 IPR036477 Formyl transferase, N-terminal domain superfamily JHS88_04170 IPR004810 Formyltetrahydrofolate deformylase JHS88_04175 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_04175 IPR006555 ATP-dependent helicase, C-terminal JHS88_04175 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type JHS88_04175 IPR006935 Helicase/UvrB, N-terminal JHS88_04175 IPR014001 Helicase superfamily 1/2, ATP-binding domain JHS88_04180 IPR000905 Gcp-like domain JHS88_04180 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB JHS88_04195 IPR000073 Alpha/beta hydrolase fold-1 JHS88_04195 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase JHS88_04195 IPR029058 Alpha/Beta hydrolase fold JHS88_04200 IPR025110 AMP-binding enzyme, C-terminal domain JHS88_04200 IPR020845 AMP-binding, conserved site JHS88_04200 IPR000873 AMP-dependent synthetase/ligase JHS88_04200 IPR042099 AMP-dependent synthetase-like superfamily JHS88_04205 IPR002562 3'-5' exonuclease domain JHS88_04205 IPR010997 HRDC-like superfamily JHS88_04205 IPR002121 HRDC domain JHS88_04205 IPR006292 Ribonuclease D JHS88_04205 IPR012337 Ribonuclease H-like superfamily JHS88_04205 IPR036397 Ribonuclease H superfamily JHS88_04210 IPR005527 Cell division topological specificity factor MinE JHS88_04210 IPR036707 Cell division topological specificity factor MinE superfamily JHS88_04215 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_04215 IPR010223 ATP binding protein MinD, bacterial-type JHS88_04215 IPR025501 ATP binding protein MinD JHS88_04215 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain JHS88_04220 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal JHS88_04220 IPR013033 Septum formation inhibitor MinC JHS88_04220 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily JHS88_04220 IPR007874 Septum formation inhibitor MinC, N-terminal JHS88_04220 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily JHS88_04220 IPR005526 Septum formation inhibitor MinC, C-terminal JHS88_04225 IPR027354 YcgL domain JHS88_04225 IPR038068 YcgL-like superfamily JHS88_04230 IPR011757 Lytic transglycosylase MltB JHS88_04230 IPR031304 Transglycosylase SLT domain 2 JHS88_04230 IPR023346 Lysozyme-like domain superfamily JHS88_04235 IPR005119 LysR, substrate-binding JHS88_04235 IPR000847 Transcription regulator HTH, LysR JHS88_04235 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_04235 IPR036390 Winged helix DNA-binding domain superfamily JHS88_04240 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain JHS88_04240 IPR008276 Concentrative nucleoside transporter JHS88_04240 IPR011657 Concentrative nucleoside transporter C-terminal domain JHS88_04240 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial JHS88_04240 IPR002668 Concentrative nucleoside transporter N-terminal domain JHS88_04245 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase JHS88_04245 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JHS88_04245 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site JHS88_04245 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JHS88_04245 IPR036291 NAD(P)-binding domain superfamily JHS88_04260 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 JHS88_04260 IPR018201 Beta-ketoacyl synthase, active site JHS88_04260 IPR014031 Beta-ketoacyl synthase, C-terminal JHS88_04260 IPR014030 Beta-ketoacyl synthase, N-terminal JHS88_04260 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain JHS88_04260 IPR016039 Thiolase-like JHS88_04260 IPR000794 Beta-ketoacyl synthase JHS88_04265 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative JHS88_04265 IPR036291 NAD(P)-binding domain superfamily JHS88_04265 IPR002347 Short-chain dehydrogenase/reductase SDR JHS88_04270 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ JHS88_04270 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ JHS88_04270 IPR029069 HotDog domain superfamily JHS88_04275 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain JHS88_04275 IPR014030 Beta-ketoacyl synthase, N-terminal JHS88_04275 IPR018201 Beta-ketoacyl synthase, active site JHS88_04275 IPR000794 Beta-ketoacyl synthase JHS88_04275 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 JHS88_04275 IPR014031 Beta-ketoacyl synthase, C-terminal JHS88_04275 IPR016039 Thiolase-like JHS88_04300 IPR001106 Aromatic amino acid lyase JHS88_04300 IPR005921 Histidine ammonia-lyase JHS88_04300 IPR008948 L-Aspartase-like JHS88_04300 IPR022313 Phenylalanine/histidine ammonia-lyases, active site JHS88_04300 IPR024083 Fumarase/histidase, N-terminal JHS88_04305 IPR039528 DPM1-like JHS88_04305 IPR001173 Glycosyltransferase 2-like JHS88_04305 IPR029044 Nucleotide-diphospho-sugar transferases JHS88_04310 IPR029069 HotDog domain superfamily JHS88_04310 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ JHS88_04310 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ JHS88_04325 IPR009081 Phosphopantetheine binding ACP domain JHS88_04325 IPR003231 Acyl carrier protein (ACP) JHS88_04325 IPR036736 ACP-like superfamily JHS88_04330 IPR006162 Phosphopantetheine attachment site JHS88_04330 IPR009081 Phosphopantetheine binding ACP domain JHS88_04330 IPR003231 Acyl carrier protein (ACP) JHS88_04330 IPR036736 ACP-like superfamily JHS88_04355 IPR006905 Flavin-dependent halogenase JHS88_04355 IPR036188 FAD/NAD(P)-binding domain superfamily JHS88_04365 IPR000644 CBS domain JHS88_04365 IPR002550 CNNM, transmembrane domain JHS88_04365 IPR036318 FAD-binding, type PCMH-like superfamily JHS88_04365 IPR005170 Transporter-associated domain JHS88_04365 IPR016169 FAD-binding, type PCMH, subdomain 2 JHS88_04370 IPR028622 ATP-dependent RNA helicase RhlE JHS88_04370 IPR011545 DEAD/DEAH box helicase domain JHS88_04370 IPR014001 Helicase superfamily 1/2, ATP-binding domain JHS88_04370 IPR001650 Helicase, C-terminal JHS88_04370 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_04370 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site JHS88_04370 IPR014014 RNA helicase, DEAD-box type, Q motif JHS88_04375 IPR036291 NAD(P)-binding domain superfamily JHS88_04375 IPR006037 Regulator of K+ conductance, C-terminal JHS88_04375 IPR003148 Regulator of K+ conductance, N-terminal JHS88_04375 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily JHS88_04380 IPR004772 TrkH potassium transport family JHS88_04380 IPR003445 Cation transporter JHS88_04395 IPR003846 Protein adenylyltransferase SelO JHS88_04400 IPR038404 TRAP transporter solute receptor DctP superfamily JHS88_04400 IPR018389 TRAP transporter solute receptor DctP/TeaA JHS88_04400 IPR004682 TRAP transporter solute receptor, DctP family JHS88_04405 IPR007387 TRAP transporter, small membrane protein DctQ JHS88_04410 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit JHS88_04410 IPR004681 TRAP transporter large membrane protein DctM JHS88_04420 IPR025944 Sigma-54 interaction domain, conserved site JHS88_04420 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JHS88_04420 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 JHS88_04420 IPR001789 Signal transduction response regulator, receiver domain JHS88_04420 IPR002078 RNA polymerase sigma factor 54 interaction domain JHS88_04420 IPR002197 DNA binding HTH domain, Fis-type JHS88_04420 IPR009057 Homeobox-like domain superfamily JHS88_04420 IPR011006 CheY-like superfamily JHS88_04420 IPR003593 AAA+ ATPase domain JHS88_04420 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_04425 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) JHS88_04425 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JHS88_04425 IPR029151 Periplasmic sensor-like domain superfamily JHS88_04425 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JHS88_04425 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JHS88_04425 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_04425 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_04425 IPR033479 Double Cache domain 1 JHS88_04425 IPR005467 Histidine kinase domain JHS88_04435 IPR008881 Trigger factor, ribosome-binding, bacterial JHS88_04435 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain JHS88_04435 IPR005215 Trigger factor JHS88_04435 IPR008880 Trigger factor, C-terminal JHS88_04435 IPR037041 Trigger factor, C-terminal domain superfamily JHS88_04435 IPR036611 Trigger factor ribosome-binding domain superfamily JHS88_04435 IPR027304 Trigger factor/SurA domain superfamily JHS88_04440 IPR029045 ClpP/crotonase-like domain superfamily JHS88_04440 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA JHS88_04440 IPR033135 ClpP, histidine active site JHS88_04440 IPR018215 ClpP, Ser active site JHS88_04440 IPR001907 ATP-dependent Clp protease proteolytic subunit JHS88_04445 IPR003593 AAA+ ATPase domain JHS88_04445 IPR003959 ATPase, AAA-type, core JHS88_04445 IPR019489 Clp ATPase, C-terminal JHS88_04445 IPR004487 Clp protease, ATP-binding subunit ClpX JHS88_04445 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_04445 IPR010603 Zinc finger, ClpX C4-type JHS88_04445 IPR038366 Zinc finger, ClpX C4-type superfamily JHS88_04450 IPR003111 Lon, substrate-binding domain JHS88_04450 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JHS88_04450 IPR020568 Ribosomal protein S5 domain 2-type fold JHS88_04450 IPR015947 PUA-like superfamily JHS88_04450 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_04450 IPR027065 Lon protease JHS88_04450 IPR004815 Lon protease, bacterial/eukaryotic-type JHS88_04450 IPR027543 Lon protease, bacterial JHS88_04450 IPR003959 ATPase, AAA-type, core JHS88_04450 IPR003593 AAA+ ATPase domain JHS88_04450 IPR008269 Peptidase S16, Lon proteolytic domain JHS88_04455 IPR000119 Histone-like DNA-binding protein JHS88_04455 IPR020816 Histone-like DNA-binding protein, conserved site JHS88_04455 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily JHS88_04460 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type JHS88_04460 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site JHS88_04460 IPR027304 Trigger factor/SurA domain superfamily JHS88_04465 IPR004509 Competence protein ComEA, helix-hairpin-helix domain JHS88_04465 IPR010994 RuvA domain 2-like JHS88_04465 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 JHS88_04480 IPR023023 dNTP triphosphohydrolase, type 2 JHS88_04480 IPR006261 dNTP triphosphohydrolase JHS88_04480 IPR003607 HD/PDEase domain JHS88_04480 IPR006674 HD domain JHS88_04480 IPR026875 Phosphohydrolase-associated domain JHS88_04485 IPR003607 HD/PDEase domain JHS88_04485 IPR022971 5'-deoxynucleotidase YfbR JHS88_04485 IPR039356 Metal-dependent nucleoside 5'-monophosphatase JHS88_04490 IPR004839 Aminotransferase, class I/classII JHS88_04490 IPR015424 Pyridoxal phosphate-dependent transferase JHS88_04490 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JHS88_04490 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JHS88_04495 IPR005801 ADC synthase JHS88_04495 IPR015890 Chorismate-utilising enzyme, C-terminal JHS88_04495 IPR004561 Isochorismate synthase JHS88_04495 IPR034681 Isochorismate synthase MenF JHS88_04500 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding JHS88_04500 IPR029061 Thiamin diphosphate-binding fold JHS88_04500 IPR032264 Menaquinone biosynthesis protein MenD, middle domain JHS88_04500 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain JHS88_04500 IPR029035 DHS-like NAD/FAD-binding domain superfamily JHS88_04500 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase JHS88_04505 IPR029058 Alpha/Beta hydrolase fold JHS88_04505 IPR000073 Alpha/beta hydrolase fold-1 JHS88_04505 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase JHS88_04510 IPR014748 Enoyl-CoA hydratase, C-terminal JHS88_04510 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site JHS88_04510 IPR001753 Enoyl-CoA hydratase/isomerase JHS88_04510 IPR029045 ClpP/crotonase-like domain superfamily JHS88_04510 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB JHS88_04515 IPR036849 Enolase-like, C-terminal domain superfamily JHS88_04515 IPR029017 Enolase-like, N-terminal JHS88_04515 IPR029065 Enolase C-terminal domain-like JHS88_04515 IPR010196 o-Succinylbenzoate synthase, MenC type1 JHS88_04515 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal JHS88_04520 IPR010192 2-succinylbenzoate--CoA ligase JHS88_04520 IPR020845 AMP-binding, conserved site JHS88_04520 IPR042099 AMP-dependent synthetase-like superfamily JHS88_04520 IPR025110 AMP-binding enzyme, C-terminal domain JHS88_04520 IPR000873 AMP-dependent synthetase/ligase JHS88_04530 IPR018383 Uncharacterised protein family UPF0324, prokaryote JHS88_04535 IPR023727 Lysophospholipid transporter LplT JHS88_04535 IPR011701 Major facilitator superfamily JHS88_04535 IPR036259 MFS transporter superfamily JHS88_04580 IPR022824 Multidrug resistance protein MdtA JHS88_04580 IPR039562 Membrane fusion protein, biotin-lipoyl like domain JHS88_04580 IPR006143 RND efflux pump, membrane fusion protein JHS88_04585 IPR001036 Acriflavin resistance protein JHS88_04585 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JHS88_04605 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site JHS88_04605 IPR001926 Pyridoxal-phosphate dependent enzyme JHS88_04605 IPR023927 2,3-diaminopropionate biosynthesis protein SbnA JHS88_04605 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme JHS88_04610 IPR011991 ArsR-like helix-turn-helix domain JHS88_04610 IPR036390 Winged helix DNA-binding domain superfamily JHS88_04610 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_04610 IPR000485 AsnC-type HTH domain JHS88_04610 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain JHS88_04610 IPR019888 Transcription regulator AsnC-type JHS88_04610 IPR011008 Dimeric alpha-beta barrel JHS88_04610 IPR019885 Transcription regulator HTH, AsnC-type, conserved site JHS88_04620 IPR003703 Acyl-CoA thioesterase JHS88_04620 IPR029069 HotDog domain superfamily JHS88_04625 IPR039366 YscW/ExsB JHS88_04630 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding JHS88_04630 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain JHS88_04630 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_04640 IPR029787 Nucleotide cyclase JHS88_04640 IPR000160 GGDEF domain JHS88_04640 IPR033417 Periplasmic sensor domain CHASE8 JHS88_04640 IPR003660 HAMP domain JHS88_04650 IPR029028 Alpha/beta knot methyltransferases JHS88_04650 IPR029064 50S ribosomal protein L30e-like JHS88_04650 IPR001537 tRNA/rRNA methyltransferase, SpoU type JHS88_04650 IPR013123 RNA 2-O ribose methyltransferase, substrate binding JHS88_04650 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JHS88_04655 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JHS88_04655 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JHS88_04655 IPR000813 7Fe ferredoxin JHS88_04655 IPR022569 Ferredoxin, C-terminal JHS88_04660 IPR036188 FAD/NAD(P)-binding domain superfamily JHS88_04660 IPR028348 FAD dependent protein JHS88_04665 IPR000644 CBS domain JHS88_04665 IPR013785 Aldolase-type TIM barrel JHS88_04665 IPR005990 Inosine-5'-monophosphate dehydrogenase JHS88_04665 IPR001093 IMP dehydrogenase/GMP reductase JHS88_04665 IPR015875 IMP dehydrogenase / GMP reductase, conserved site JHS88_04670 IPR001757 P-type ATPase JHS88_04670 IPR027256 P-type ATPase, subfamily IB JHS88_04670 IPR036163 Heavy metal-associated domain superfamily JHS88_04670 IPR017969 Heavy-metal-associated, conserved site JHS88_04670 IPR023214 HAD superfamily JHS88_04670 IPR006121 Heavy metal-associated domain, HMA JHS88_04670 IPR008250 P-type ATPase, A domain superfamily JHS88_04670 IPR023298 P-type ATPase, transmembrane domain superfamily JHS88_04670 IPR018303 P-type ATPase, phosphorylation site JHS88_04670 IPR023299 P-type ATPase, cytoplasmic domain N JHS88_04670 IPR036412 HAD-like superfamily JHS88_04675 IPR010058 Uridine phosphorylase JHS88_04675 IPR018016 Nucleoside phosphorylase, conserved site JHS88_04675 IPR000845 Nucleoside phosphorylase domain JHS88_04675 IPR035994 Nucleoside phosphorylase superfamily JHS88_04685 IPR003660 HAMP domain JHS88_04685 IPR004090 Chemotaxis methyl-accepting receptor JHS88_04685 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JHS88_04690 IPR011146 HIT-like domain JHS88_04690 IPR036265 HIT-like superfamily JHS88_04690 IPR001310 Histidine triad (HIT) protein JHS88_04690 IPR019808 Histidine triad, conserved site JHS88_04705 IPR012640 Membrane lipoprotein, lipid attachment site JHS88_04705 IPR014094 Penicillin-binding protein activator LpoB JHS88_04715 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA JHS88_04715 IPR029058 Alpha/Beta hydrolase fold JHS88_04715 IPR022987 Uncharacterised protein family UPF0227 JHS88_04720 IPR036188 FAD/NAD(P)-binding domain superfamily JHS88_04720 IPR023753 FAD/NAD(P)-binding domain JHS88_04735 IPR041471 UvrB, interaction domain JHS88_04735 IPR037235 TRCF-like, C-terminal domain JHS88_04735 IPR005118 Transcription-repair-coupling factor, C-terminal domain JHS88_04735 IPR001650 Helicase, C-terminal JHS88_04735 IPR004576 Transcription-repair coupling factor JHS88_04735 IPR011545 DEAD/DEAH box helicase domain JHS88_04735 IPR003711 CarD-like/TRCF domain JHS88_04735 IPR036101 CarD-like/TRCF domain superfamily JHS88_04735 IPR014001 Helicase superfamily 1/2, ATP-binding domain JHS88_04735 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_04745 IPR025857 MacB-like periplasmic core domain JHS88_04745 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E JHS88_04745 IPR003838 ABC transporter permease protein domain JHS88_04750 IPR017871 ABC transporter, conserved site JHS88_04750 IPR003593 AAA+ ATPase domain JHS88_04750 IPR003439 ABC transporter-like JHS88_04750 IPR015854 ABC transporter, lipoprotein release, LolD JHS88_04750 IPR011924 Lipoprotein releasing system, ATP-binding protein JHS88_04750 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_04755 IPR025857 MacB-like periplasmic core domain JHS88_04755 IPR003838 ABC transporter permease protein domain JHS88_04755 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E JHS88_04755 IPR011926 Lipoprotein-releasing system transmembrane protein LolE, gammaproteobacteria type JHS88_04765 IPR035681 ComA-like, MBL domain JHS88_04765 IPR004477 ComEC/Rec2-related protein JHS88_04765 IPR004797 Competence protein ComEC/Rec2 JHS88_04765 IPR025405 Domain of unknown function DUF4131 JHS88_04765 IPR001279 Metallo-beta-lactamase JHS88_04765 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JHS88_04770 IPR039421 Type I protein exporter JHS88_04770 IPR017871 ABC transporter, conserved site JHS88_04770 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_04770 IPR011917 ABC transporter, lipid A export, MsbA JHS88_04770 IPR036640 ABC transporter type 1, transmembrane domain superfamily JHS88_04770 IPR011527 ABC transporter type 1, transmembrane domain JHS88_04770 IPR003593 AAA+ ATPase domain JHS88_04770 IPR003439 ABC transporter-like JHS88_04775 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_04775 IPR003758 Tetraacyldisaccharide 4'-kinase JHS88_04780 IPR005651 Trm112-like JHS88_04785 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase JHS88_04785 IPR003329 Acylneuraminate cytidylyltransferase JHS88_04785 IPR029044 Nucleotide-diphospho-sugar transferases JHS88_04790 IPR007390 Sporulation stage V, protein R JHS88_04795 IPR006698 Uncharacterised protein family UPF0229 JHS88_04800 IPR016230 Serine-protein kinase, PrkA JHS88_04800 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_04800 IPR013153 PrkA AAA domain JHS88_04800 IPR010650 PrkA C-terminal domain JHS88_04805 IPR023145 YfbU, helix-hairpin domain superfamily JHS88_04805 IPR005587 Uncharacterised protein family UPF0304, YfbU JHS88_04805 IPR023146 YfbU, alpha-helical bundle domain superfamily JHS88_04815 IPR012839 Organic radical enzyme activase JHS88_04815 IPR013785 Aldolase-type TIM barrel JHS88_04815 IPR034457 Organic radical-activating enzymes JHS88_04815 IPR001989 Radical-activating enzyme, conserved site JHS88_04815 IPR012838 Pyruvate formate-lyase 1 activating enzyme JHS88_04815 IPR034465 Pyruvate formate-lyase activase JHS88_04815 IPR007197 Radical SAM JHS88_04825 IPR005949 Formate acetyltransferase JHS88_04825 IPR019777 Formate C-acetyltransferase glycine radical, conserved site JHS88_04825 IPR001150 Glycine radical domain JHS88_04825 IPR004184 Pyruvate formate lyase domain JHS88_04840 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_04840 IPR017871 ABC transporter, conserved site JHS88_04840 IPR003439 ABC transporter-like JHS88_04840 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type JHS88_04840 IPR003593 AAA+ ATPase domain JHS88_04845 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter JHS88_04845 IPR018313 Solute-binding protein family 3, conserved site JHS88_04845 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JHS88_04850 IPR030199 Histidine transport system permease protein HisQ JHS88_04850 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JHS88_04850 IPR035906 MetI-like superfamily JHS88_04850 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain JHS88_04855 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JHS88_04855 IPR035906 MetI-like superfamily JHS88_04855 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain JHS88_04865 IPR037493 Exodeoxyribonuclease III-like JHS88_04865 IPR005135 Endonuclease/exonuclease/phosphatase JHS88_04865 IPR004808 AP endonuclease 1 JHS88_04865 IPR036691 Endonuclease/exonuclease/phosphatase superfamily JHS88_04865 IPR020848 AP endonuclease 1, conserved site JHS88_04865 IPR020847 AP endonuclease 1, binding site JHS88_04870 IPR019630 Protein of unknown function DUF2496, YbaM-related JHS88_04875 IPR038338 PriB/PriC superfamily JHS88_04875 IPR010890 Primosomal replication PriB/PriC JHS88_04880 IPR002781 Transmembrane protein TauE-like JHS88_04885 IPR010614 DEAD2 JHS88_04885 IPR039000 ATP-dependent DNA helicase DinG JHS88_04885 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type JHS88_04885 IPR001650 Helicase, C-terminal JHS88_04885 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_04885 IPR006555 ATP-dependent helicase, C-terminal JHS88_04895 IPR018635 Uncharacterised protein family UPF0319 JHS88_04900 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain JHS88_04900 IPR020103 Pseudouridine synthase, catalytic domain superfamily JHS88_04900 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F JHS88_04900 IPR006145 Pseudouridine synthase, RsuA/RluA JHS88_04900 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site JHS88_04905 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric JHS88_04910 IPR002059 Cold-shock protein, DNA-binding JHS88_04910 IPR012156 Cold shock, CspA JHS88_04910 IPR011129 Cold shock domain JHS88_04910 IPR019844 Cold-shock (CSD) domain JHS88_04910 IPR012751 CspD, cold shock JHS88_04910 IPR012340 Nucleic acid-binding, OB-fold JHS88_04915 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like JHS88_04915 IPR003769 Adaptor protein ClpS, core JHS88_04915 IPR022935 ATP-dependent Clp protease adaptor protein ClpS JHS88_04920 IPR001270 ClpA/B family JHS88_04920 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_04920 IPR018368 ClpA/B, conserved site 1 JHS88_04920 IPR028299 ClpA/B, conserved site 2 JHS88_04920 IPR041546 ClpA/ClpB, AAA lid domain JHS88_04920 IPR004176 Clp, N-terminal JHS88_04920 IPR036628 Clp, N-terminal domain superfamily JHS88_04920 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA JHS88_04920 IPR003959 ATPase, AAA-type, core JHS88_04920 IPR003593 AAA+ ATPase domain JHS88_04920 IPR019489 Clp ATPase, C-terminal JHS88_04930 IPR006196 RNA-binding domain, S1, IF1 type JHS88_04930 IPR004368 Translation initiation factor IF-1 JHS88_04930 IPR022967 RNA-binding domain, S1 JHS88_04930 IPR012340 Nucleic acid-binding, OB-fold JHS88_04935 IPR007472 N-end rule aminoacyl transferase, C-terminal JHS88_04935 IPR007471 N-end aminoacyl transferase, N-terminal JHS88_04935 IPR017138 Aspartate/glutamate leucyltransferase JHS88_04935 IPR016181 Acyl-CoA N-acyltransferase JHS88_04935 IPR030700 N-end rule aminoacyl transferase JHS88_04940 IPR016181 Acyl-CoA N-acyltransferase JHS88_04940 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase JHS88_04940 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal JHS88_04950 IPR036968 Enolpyruvate transferase domain superfamily JHS88_04950 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta JHS88_04950 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site JHS88_04950 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase JHS88_04950 IPR001986 Enolpyruvate transferase domain JHS88_04955 IPR038191 YciN superfamily JHS88_04955 IPR019633 Protein of unknown function DUF2498 JHS88_04960 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type JHS88_04960 IPR003601 DNA topoisomerase, type IA, domain 2 JHS88_04960 IPR023406 DNA topoisomerase, type IA, active site JHS88_04960 IPR034149 DNA topoisomerase 1, TOPRIM domain JHS88_04960 IPR006171 TOPRIM domain JHS88_04960 IPR028612 DNA topoisomerase I, type IA JHS88_04960 IPR005733 DNA topoisomerase I, bacterial-type JHS88_04960 IPR013498 DNA topoisomerase, type IA, zn finger JHS88_04960 IPR003602 DNA topoisomerase, type IA, DNA-binding domain JHS88_04960 IPR023405 DNA topoisomerase, type IA, core domain JHS88_04960 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 JHS88_04960 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 JHS88_04960 IPR000380 DNA topoisomerase, type IA JHS88_04960 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 JHS88_04960 IPR013497 DNA topoisomerase, type IA, central JHS88_04965 IPR011831 Glucose-1-phosphate adenylyltransferase JHS88_04965 IPR005836 ADP-glucose pyrophosphorylase, conserved site JHS88_04965 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial JHS88_04965 IPR005835 Nucleotidyl transferase domain JHS88_04965 IPR029044 Nucleotide-diphospho-sugar transferases JHS88_04965 IPR011004 Trimeric LpxA-like superfamily JHS88_04970 IPR013534 Starch synthase, catalytic domain JHS88_04970 IPR001296 Glycosyl transferase, family 1 JHS88_04970 IPR011835 Bacterial/plant glycogen synthase JHS88_04990 IPR007077 TfoX, C-terminal JHS88_04990 IPR007076 TfoX, N-terminal JHS88_04990 IPR026256 Transcriptional regulator, TfoX/Sxy-type JHS88_04995 IPR023588 Transcription regulator HTH, PurR JHS88_04995 IPR010982 Lambda repressor-like, DNA-binding domain superfamily JHS88_04995 IPR028082 Periplasmic binding protein-like I JHS88_04995 IPR000843 LacI-type HTH domain JHS88_05000 IPR036386 HscB, C-terminal domain superfamily JHS88_05000 IPR020945 DMSO/Nitrate reductase chaperone JHS88_05000 IPR036411 TorD-like superfamily JHS88_05000 IPR023069 Chaperone TorD JHS88_05005 IPR011006 CheY-like superfamily JHS88_05005 IPR001867 OmpR/PhoB-type DNA-binding domain JHS88_05005 IPR039420 Transcriptional regulatory protein WalR-like JHS88_05005 IPR001789 Signal transduction response regulator, receiver domain JHS88_05005 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_05010 IPR003848 Domain of unknown function DUF218 JHS88_05015 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase JHS88_05015 IPR025714 Methyltransferase domain JHS88_05015 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_05020 IPR005582 Chromosome partition protein MukF JHS88_05020 IPR033441 Chromosome partition protein MukF, C-terminal domain JHS88_05020 IPR033440 Chromosome partition protein MukF, middle domain JHS88_05020 IPR036141 MukF, middle domain superfamily JHS88_05020 IPR033439 Chromosome partition protein MukF, winged-helix domain JHS88_05020 IPR038198 MukF, C-terminal domain superfamily JHS88_05020 IPR036390 Winged helix DNA-binding domain superfamily JHS88_05020 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_05025 IPR042037 MukE, C-terminal domain JHS88_05025 IPR042038 MukE, N-terminal domain JHS88_05025 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE JHS88_05030 IPR007406 MukB, N-terminal domain JHS88_05030 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_05030 IPR012090 Chromosome partition protein MukB JHS88_05030 IPR032520 MukB, hinge domain JHS88_05040 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX JHS88_05040 IPR041107 RimK, PreATP-grasp domain JHS88_05040 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK JHS88_05040 IPR013815 ATP-grasp fold, subdomain 1 JHS88_05040 IPR013651 ATP-grasp fold, RimK-type JHS88_05040 IPR011761 ATP-grasp fold JHS88_05050 IPR011761 ATP-grasp fold JHS88_05050 IPR013651 ATP-grasp fold, RimK-type JHS88_05050 IPR013815 ATP-grasp fold, subdomain 1 JHS88_05050 IPR021109 Aspartic peptidase domain superfamily JHS88_05050 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK JHS88_05050 IPR041107 RimK, PreATP-grasp domain JHS88_05050 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX JHS88_05055 IPR010017 tRNA U34 carboxymethyltransferase JHS88_05055 IPR027555 tRNA (mo5U34)-methyltransferase-like JHS88_05055 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_05060 IPR005271 Carboxy-S-adenosyl-L-methionine synthase JHS88_05060 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_05060 IPR041698 Methyltransferase domain 25 JHS88_05065 IPR036520 UPF0759 superfamily JHS88_05065 IPR002763 Protein of unknown function DUF72 JHS88_05070 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type JHS88_05070 IPR012340 Nucleic acid-binding, OB-fold JHS88_05070 IPR029351 GAD domain JHS88_05070 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb JHS88_05070 IPR004524 Aspartate-tRNA ligase, type 1 JHS88_05070 IPR006195 Aminoacyl-tRNA synthetase, class II JHS88_05070 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) JHS88_05070 IPR004115 GAD-like domain superfamily JHS88_05075 IPR012337 Ribonuclease H-like superfamily JHS88_05075 IPR002176 Crossover junction endodeoxyribonuclease RuvC JHS88_05075 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site JHS88_05075 IPR036397 Ribonuclease H superfamily JHS88_05080 IPR004090 Chemotaxis methyl-accepting receptor JHS88_05080 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site JHS88_05080 IPR003660 HAMP domain JHS88_05080 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily JHS88_05080 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JHS88_05080 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding JHS88_05085 IPR010994 RuvA domain 2-like JHS88_05085 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial JHS88_05085 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 JHS88_05085 IPR012340 Nucleic acid-binding, OB-fold JHS88_05085 IPR000085 Bacterial DNA recombination protein RuvA JHS88_05085 IPR011114 Holliday junction DNA helicase RuvA, C-terminal JHS88_05085 IPR036267 RuvA, C-terminal domain superfamily JHS88_05090 IPR008824 RuvB-like P-loop domain JHS88_05090 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_05090 IPR004605 DNA helicase, Holliday junction RuvB-type JHS88_05090 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_05090 IPR003593 AAA+ ATPase domain JHS88_05090 IPR008823 RuvB C-terminal winged helix domain JHS88_05090 IPR036390 Winged helix DNA-binding domain superfamily JHS88_05090 IPR041445 RuvB, AAA lid domain JHS88_05095 IPR002585 Cytochrome ubiquinol oxidase subunit 1 JHS88_05100 IPR003317 Cytochrome ubiquinol oxidase subunit 2 JHS88_05105 IPR012994 Membrane bound YbgT-like JHS88_05105 IPR011724 Cyd operon protein YbgT JHS88_05115 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family JHS88_05115 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase JHS88_05115 IPR029069 HotDog domain superfamily JHS88_05115 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site JHS88_05115 IPR006683 Thioesterase domain JHS88_05120 IPR014163 Tol-Pal system, TolQ JHS88_05120 IPR002898 MotA/TolQ/ExbB proton channel JHS88_05125 IPR014168 Tol-Pal system protein TolR JHS88_05125 IPR003400 Biopolymer transport protein ExbD/TolR JHS88_05135 IPR007195 TolB, N-terminal JHS88_05135 IPR014167 Tol-Pal system protein TolB JHS88_05135 IPR011659 WD40-like Beta Propeller JHS88_05135 IPR011042 Six-bladed beta-propeller, TolB-like JHS88_05135 IPR036752 TolB, N-terminal domain superfamily JHS88_05140 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal JHS88_05140 IPR036737 OmpA-like domain superfamily JHS88_05140 IPR006690 Outer membrane protein, OmpA-like, conserved site JHS88_05140 IPR006665 OmpA-like domain JHS88_05140 IPR006664 Outer membrane protein, bacterial JHS88_05140 IPR039001 Peptidoglycan-associated lipoprotein JHS88_05145 IPR032519 YbgF, trimerisation domain JHS88_05145 IPR034706 Cell division coordinator CpoB JHS88_05145 IPR014162 Cell division coordinator CpoB, C-terminal JHS88_05145 IPR013026 Tetratricopeptide repeat-containing domain JHS88_05145 IPR011990 Tetratricopeptide-like helical domain superfamily JHS88_05145 IPR019734 Tetratricopeptide repeat JHS88_05150 IPR036094 Quinolinate synthetase A superfamily JHS88_05150 IPR023513 Quinolinate synthase A, type 1 JHS88_05150 IPR003473 Quinolinate synthetase A JHS88_05160 IPR007140 Protein of unknown function DUF350 JHS88_05170 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain JHS88_05170 IPR016185 Pre-ATP-grasp domain superfamily JHS88_05180 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JHS88_05180 IPR029151 Periplasmic sensor-like domain superfamily JHS88_05180 IPR015387 LuxQ, periplasmic JHS88_05180 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JHS88_05180 IPR001789 Signal transduction response regulator, receiver domain JHS88_05180 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_05180 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_05180 IPR011006 CheY-like superfamily JHS88_05180 IPR005467 Histidine kinase domain JHS88_05180 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JHS88_05185 IPR010574 L-alanine exporter AlaE JHS88_05210 IPR036876 UVR domain superfamily JHS88_05210 IPR014001 Helicase superfamily 1/2, ATP-binding domain JHS88_05210 IPR001650 Helicase, C-terminal JHS88_05210 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_05210 IPR001943 UVR domain JHS88_05210 IPR006935 Helicase/UvrB, N-terminal JHS88_05210 IPR004807 UvrABC system, subunit B JHS88_05210 IPR041471 UvrB, interaction domain JHS88_05210 IPR024759 UvrB, YAD/RRR-motif-containing domain JHS88_05270 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily JHS88_05270 IPR006119 Resolvase, N-terminal catalytic domain JHS88_05270 IPR006120 Resolvase, HTH domain JHS88_05270 IPR009057 Homeobox-like domain superfamily JHS88_05270 IPR006118 Recombinase, conserved site JHS88_05280 IPR004090 Chemotaxis methyl-accepting receptor JHS88_05280 IPR003660 HAMP domain JHS88_05280 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain JHS88_05280 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JHS88_05280 IPR000727 Target SNARE coiled-coil homology domain JHS88_05285 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain JHS88_05285 IPR006143 RND efflux pump, membrane fusion protein JHS88_05290 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JHS88_05290 IPR001036 Acriflavin resistance protein JHS88_05290 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 JHS88_05305 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JHS88_05305 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site JHS88_05305 IPR002306 Tryptophan-tRNA ligase JHS88_05305 IPR002305 Aminoacyl-tRNA synthetase, class Ic JHS88_05305 IPR024109 Tryptophan-tRNA ligase, bacterial-type JHS88_05315 IPR036691 Endonuclease/exonuclease/phosphatase superfamily JHS88_05315 IPR005135 Endonuclease/exonuclease/phosphatase JHS88_05315 IPR017766 Sphingomyelinase C/phospholipase C JHS88_05320 IPR012347 Ferritin-like JHS88_05320 IPR009078 Ferritin-like superfamily JHS88_05320 IPR010386 tRNA-hydroxylase MiaE JHS88_05330 IPR005119 LysR, substrate-binding JHS88_05330 IPR000847 Transcription regulator HTH, LysR JHS88_05330 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_05330 IPR036390 Winged helix DNA-binding domain superfamily JHS88_05340 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain JHS88_05340 IPR036291 NAD(P)-binding domain superfamily JHS88_05340 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 JHS88_05340 IPR008141 Alanine dehydrogenase JHS88_05340 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal JHS88_05345 IPR011991 ArsR-like helix-turn-helix domain JHS88_05345 IPR011008 Dimeric alpha-beta barrel JHS88_05345 IPR019888 Transcription regulator AsnC-type JHS88_05345 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain JHS88_05345 IPR019885 Transcription regulator HTH, AsnC-type, conserved site JHS88_05345 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_05345 IPR036390 Winged helix DNA-binding domain superfamily JHS88_05345 IPR000485 AsnC-type HTH domain JHS88_05350 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_05350 IPR036390 Winged helix DNA-binding domain superfamily JHS88_05350 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_05350 IPR041027 FtsK alpha domain JHS88_05350 IPR002543 FtsK domain JHS88_05350 IPR018541 FtsK gamma domain JHS88_05350 IPR025199 DNA translocase FtsK, 4TM region JHS88_05355 IPR004564 Outer membrane lipoprotein carrier protein LolA-like JHS88_05355 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria JHS88_05355 IPR029046 Lipoprotein localisation LolA/LolB/LppX JHS88_05360 IPR003593 AAA+ ATPase domain JHS88_05360 IPR032423 AAA C-terminal domain JHS88_05360 IPR003959 ATPase, AAA-type, core JHS88_05360 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal JHS88_05360 IPR021886 MgsA AAA+ ATPase C-terminal JHS88_05360 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_05365 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm JHS88_05365 IPR033729 Serine-tRNA ligase catalytic core domain JHS88_05365 IPR015866 Serine-tRNA synthetase, type1, N-terminal JHS88_05365 IPR002317 Serine-tRNA ligase, type1 JHS88_05365 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) JHS88_05365 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily JHS88_05365 IPR006195 Aminoacyl-tRNA synthetase, class II JHS88_05375 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria JHS88_05375 IPR000962 Zinc finger, DksA/TraR C4-type JHS88_05375 IPR020458 Zinc finger, DksA/TraR C4-type conserved site JHS88_05380 IPR005814 Aminotransferase class-III JHS88_05380 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA JHS88_05380 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JHS88_05380 IPR015424 Pyridoxal phosphate-dependent transferase JHS88_05380 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JHS88_05385 IPR013785 Aldolase-type TIM barrel JHS88_05385 IPR010722 Biotin and thiamin synthesis-associated domain JHS88_05385 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB JHS88_05385 IPR024177 Biotin synthase JHS88_05385 IPR006638 Elp3/MiaB/NifB JHS88_05385 IPR007197 Radical SAM JHS88_05390 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria JHS88_05390 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JHS88_05390 IPR015424 Pyridoxal phosphate-dependent transferase JHS88_05390 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type JHS88_05390 IPR004839 Aminotransferase, class I/classII JHS88_05390 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site JHS88_05390 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JHS88_05395 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_05395 IPR013216 Methyltransferase type 11 JHS88_05395 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC JHS88_05400 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_05400 IPR004472 Dethiobiotin synthase BioD JHS88_05410 IPR001915 Peptidase M48 JHS88_05410 IPR022919 Peptidase M48, protease HtpX, putative JHS88_05420 IPR036291 NAD(P)-binding domain superfamily JHS88_05420 IPR020904 Short-chain dehydrogenase/reductase, conserved site JHS88_05420 IPR002347 Short-chain dehydrogenase/reductase SDR JHS88_05435 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_05435 IPR003333 Mycolic acid cyclopropane synthase JHS88_05455 IPR013539 Adenylosuccinate lyase PurB, C-terminal JHS88_05455 IPR022761 Fumarate lyase, N-terminal JHS88_05455 IPR000362 Fumarate lyase family JHS88_05455 IPR020557 Fumarate lyase, conserved site JHS88_05455 IPR004769 Adenylosuccinate lyase JHS88_05455 IPR024083 Fumarase/histidase, N-terminal JHS88_05455 IPR008948 L-Aspartase-like JHS88_05460 IPR035932 HflD-like superfamily JHS88_05460 IPR007451 High frequency lysogenization protein HflD JHS88_05465 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JHS88_05465 IPR004506 tRNA-specific 2-thiouridylase JHS88_05465 IPR023382 Adenine nucleotide alpha hydrolase-like domains JHS88_05475 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site JHS88_05475 IPR011611 Carbohydrate kinase PfkB JHS88_05475 IPR029056 Ribokinase-like JHS88_05480 IPR001801 Histone-like protein H-NS JHS88_05480 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily JHS88_05480 IPR027454 Histone-like protein H-NS, N-terminal JHS88_05480 IPR027444 Histone-like protein H-NS, C-terminal domain JHS88_05485 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal JHS88_05495 IPR009057 Homeobox-like domain superfamily JHS88_05495 IPR011006 CheY-like superfamily JHS88_05495 IPR003593 AAA+ ATPase domain JHS88_05495 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_05495 IPR001789 Signal transduction response regulator, receiver domain JHS88_05495 IPR002078 RNA polymerase sigma factor 54 interaction domain JHS88_05495 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 JHS88_05495 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JHS88_05495 IPR025944 Sigma-54 interaction domain, conserved site JHS88_05495 IPR002197 DNA binding HTH domain, Fis-type JHS88_05500 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal JHS88_05500 IPR011322 Nitrogen regulatory PII-like, alpha/beta JHS88_05500 IPR013820 ATP phosphoribosyltransferase, catalytic domain JHS88_05500 IPR020621 ATP phosphoribosyltransferase HisG, long form JHS88_05500 IPR001348 ATP phosphoribosyltransferase HisG JHS88_05500 IPR018198 ATP phosphoribosyltransferase, conserved site JHS88_05500 IPR013115 Histidine biosynthesis HisG, C-terminal JHS88_05505 IPR016161 Aldehyde/histidinol dehydrogenase JHS88_05505 IPR001692 Histidinol dehydrogenase, conserved site JHS88_05505 IPR022695 Histidinol dehydrogenase, monofunctional JHS88_05505 IPR012131 Histidinol dehydrogenase JHS88_05510 IPR004839 Aminotransferase, class I/classII JHS88_05510 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site JHS88_05510 IPR005861 Histidinol-phosphate aminotransferase family JHS88_05510 IPR015424 Pyridoxal phosphate-dependent transferase JHS88_05510 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JHS88_05510 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JHS88_05515 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily JHS88_05515 IPR020568 Ribosomal protein S5 domain 2-type fold JHS88_05515 IPR013954 Polynucleotide kinase 3 phosphatase JHS88_05515 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site JHS88_05515 IPR000807 Imidazoleglycerol-phosphate dehydratase JHS88_05515 IPR006543 Histidinol-phosphate phosphatase JHS88_05515 IPR020566 Histidine biosynthesis bifunctional protein HisB JHS88_05515 IPR023214 HAD superfamily JHS88_05515 IPR006549 HAD-superfamily hydrolase,subfamily IIIA JHS88_05515 IPR036412 HAD-like superfamily JHS88_05515 IPR005954 Histidinol-phosphatase JHS88_05520 IPR029062 Class I glutamine amidotransferase-like JHS88_05520 IPR017926 Glutamine amidotransferase JHS88_05520 IPR010139 Imidazole glycerol phosphate synthase, subunit H JHS88_05525 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA JHS88_05525 IPR011060 Ribulose-phosphate binding barrel JHS88_05525 IPR013785 Aldolase-type TIM barrel JHS88_05525 IPR006062 Histidine biosynthesis JHS88_05525 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase JHS88_05530 IPR004651 Histidine biosynthesis, HisF JHS88_05530 IPR011060 Ribulose-phosphate binding barrel JHS88_05530 IPR013785 Aldolase-type TIM barrel JHS88_05530 IPR006062 Histidine biosynthesis JHS88_05535 IPR023019 Histidine biosynthesis bifunctional protein HisIE JHS88_05535 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily JHS88_05535 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase JHS88_05535 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain JHS88_05535 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like JHS88_05540 IPR032710 NTF2-like domain superfamily JHS88_05540 IPR004027 SEC-C motif JHS88_05540 IPR023006 Uncharacterised protein family UPF0225 JHS88_05545 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing JHS88_05545 IPR001633 EAL domain JHS88_05545 IPR035919 EAL domain superfamily JHS88_05545 IPR013976 Metal-dependent hydrolase HDOD JHS88_05550 IPR010138 UDP-2,3-diacylglucosamine hydrolase JHS88_05550 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type JHS88_05550 IPR029052 Metallo-dependent phosphatase-like JHS88_05555 IPR029000 Cyclophilin-like domain superfamily JHS88_05555 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase JHS88_05555 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site JHS88_05555 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain JHS88_05560 IPR015803 Cysteine-tRNA ligase JHS88_05560 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR JHS88_05560 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase JHS88_05560 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JHS88_05560 IPR032678 tRNA synthetases class I, catalytic domain JHS88_05560 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding JHS88_05565 IPR001267 Thymidine kinase JHS88_05565 IPR020633 Thymidine kinase, conserved site JHS88_05565 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_05570 IPR003848 Domain of unknown function DUF218 JHS88_05570 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JHS88_05595 IPR023271 Aquaporin-like JHS88_05595 IPR000292 Formate/nitrite transporter JHS88_05595 IPR024002 Formate/nitrite transporter, conserved site JHS88_05595 IPR023999 Formate transporter FocA, putative JHS88_05605 IPR005226 UPF0014 family JHS88_05610 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE JHS88_05610 IPR004448 Nitrate reductas, NapE, periplasmic JHS88_05615 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT JHS88_05615 IPR038266 NapC/NirT cytochrome c superfamily JHS88_05615 IPR005126 NapC/NirT cytochrome c, N-terminal JHS88_05615 IPR011031 Multihaem cytochrome JHS88_05615 IPR024717 Denitrification system component NapC/NirT/NrfH JHS88_05615 IPR036280 Multiheme cytochrome superfamily JHS88_05620 IPR009010 Aspartate decarboxylase-like domain superfamily JHS88_05620 IPR041954 Trimethylamine-N-oxide reductase-like, molybdopterin-binding domain JHS88_05620 IPR041460 Molybdopterin oxidoreductase, N-terminal JHS88_05620 IPR006657 Molybdopterin dinucleotide-binding domain JHS88_05620 IPR006656 Molybdopterin oxidoreductase JHS88_05620 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site JHS88_05620 IPR006311 Twin-arginine translocation pathway, signal sequence JHS88_05620 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal JHS88_05620 IPR011887 Trimethylamine-N-oxide reductase TorA JHS88_05625 IPR031704 Glycosyl hydrolase family 36, N-terminal JHS88_05625 IPR013785 Aldolase-type TIM barrel JHS88_05625 IPR038417 Alpha-galactosidase, N-terminal domain superfamily JHS88_05625 IPR000111 Glycoside hydrolase family 27/36, conserved site JHS88_05625 IPR002252 Glycoside hydrolase family 36 JHS88_05625 IPR031705 Glycosyl hydrolase family 36, C-terminal JHS88_05625 IPR017853 Glycoside hydrolase superfamily JHS88_05635 IPR001667 DDH domain JHS88_05635 IPR038763 DHH phosphoesterase superfamily JHS88_05635 IPR004097 DHHA2 domain JHS88_05635 IPR038222 DHHA2 domain superfamily JHS88_05635 IPR022934 Manganese-dependent inorganic pyrophosphatase, probable JHS88_05645 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_05645 IPR017871 ABC transporter, conserved site JHS88_05645 IPR003593 AAA+ ATPase domain JHS88_05645 IPR003439 ABC transporter-like JHS88_05650 IPR003593 AAA+ ATPase domain JHS88_05650 IPR003439 ABC transporter-like JHS88_05650 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal JHS88_05650 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_05655 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JHS88_05655 IPR035906 MetI-like superfamily JHS88_05655 IPR025966 Oligopeptide transport permease C-like, N-terminal domain JHS88_05660 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JHS88_05660 IPR035906 MetI-like superfamily JHS88_05665 IPR000914 Solute-binding protein family 5 domain JHS88_05665 IPR039424 Solute-binding protein family 5 JHS88_05665 IPR023765 Solute-binding protein family 5, conserved site JHS88_05665 IPR030678 Peptide/nickel binding protein, MppA-type JHS88_05670 IPR014317 Transcription activator PspF JHS88_05670 IPR002197 DNA binding HTH domain, Fis-type JHS88_05670 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_05670 IPR002078 RNA polymerase sigma factor 54 interaction domain JHS88_05670 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JHS88_05670 IPR025944 Sigma-54 interaction domain, conserved site JHS88_05670 IPR009057 Homeobox-like domain superfamily JHS88_05670 IPR003593 AAA+ ATPase domain JHS88_05675 IPR014319 Phage shock protein, PspA JHS88_05675 IPR007157 PspA/IM30 JHS88_05680 IPR009554 Phage shock protein B JHS88_05685 IPR007168 Phage shock protein, PspC, N-terminal JHS88_05685 IPR014320 Phage shock protein, PspC JHS88_05690 IPR006143 RND efflux pump, membrane fusion protein JHS88_05690 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain JHS88_05695 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain JHS88_05695 IPR006143 RND efflux pump, membrane fusion protein JHS88_05695 IPR022824 Multidrug resistance protein MdtA JHS88_05700 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JHS88_05700 IPR001036 Acriflavin resistance protein JHS88_05705 IPR005019 Methyladenine glycosylase JHS88_05705 IPR011257 DNA glycosylase JHS88_05705 IPR004597 DNA-3-methyladenine glycosylase I JHS88_05710 IPR004961 Lipase chaperone JHS88_05715 IPR029058 Alpha/Beta hydrolase fold JHS88_05715 IPR000073 Alpha/beta hydrolase fold-1 JHS88_05720 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme JHS88_05720 IPR015424 Pyridoxal phosphate-dependent transferase JHS88_05720 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JHS88_05720 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JHS88_05720 IPR006233 Cystathionine beta-lyase, bacterial JHS88_05725 IPR027379 Cardiolipin synthase N-terminal JHS88_05725 IPR025202 Phospholipase D-like domain JHS88_05725 IPR030840 Cardiolipin synthase A JHS88_05725 IPR001736 Phospholipase D/Transphosphatidylase JHS88_05725 IPR022924 Cardiolipin synthase JHS88_05730 IPR000175 Sodium:neurotransmitter symporter JHS88_05730 IPR037272 Sodium:neurotransmitter symporter superfamily JHS88_05735 IPR004090 Chemotaxis methyl-accepting receptor JHS88_05735 IPR003660 HAMP domain JHS88_05735 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain JHS88_05735 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JHS88_05735 IPR000727 Target SNARE coiled-coil homology domain JHS88_05740 IPR006508 Pseudouridine synthase, RluA-like JHS88_05740 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site JHS88_05740 IPR020103 Pseudouridine synthase, catalytic domain superfamily JHS88_05740 IPR006145 Pseudouridine synthase, RsuA/RluA JHS88_05750 IPR017938 Riboflavin synthase-like beta-barrel JHS88_05750 IPR000951 Phthalate dioxygenase reductase JHS88_05750 IPR001433 Oxidoreductase FAD/NAD(P)-binding JHS88_05750 IPR017927 FAD-binding domain, ferredoxin reductase-type JHS88_05750 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain JHS88_05750 IPR036010 2Fe-2S ferredoxin-like superfamily JHS88_05750 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JHS88_05750 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain JHS88_05750 IPR012675 Beta-grasp domain superfamily JHS88_05755 IPR016099 Prismane-like, alpha/beta-sandwich JHS88_05755 IPR011254 Prismane-like superfamily JHS88_05755 IPR016100 Prismane, alpha-bundle JHS88_05755 IPR010048 Hydroxylamine reductase JHS88_05755 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase JHS88_05760 IPR025944 Sigma-54 interaction domain, conserved site JHS88_05760 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JHS88_05760 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 JHS88_05760 IPR009057 Homeobox-like domain superfamily JHS88_05760 IPR029016 GAF-like domain superfamily JHS88_05760 IPR003018 GAF domain JHS88_05760 IPR003593 AAA+ ATPase domain JHS88_05760 IPR002078 RNA polymerase sigma factor 54 interaction domain JHS88_05760 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_05770 IPR000462 CDP-alcohol phosphatidyltransferase JHS88_05775 IPR003593 AAA+ ATPase domain JHS88_05775 IPR003439 ABC transporter-like JHS88_05775 IPR017871 ABC transporter, conserved site JHS88_05775 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_05780 IPR035906 MetI-like superfamily JHS88_05780 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JHS88_05785 IPR006059 Bacterial extracellular solute-binding protein JHS88_05785 IPR027020 Protein ynjB JHS88_05790 IPR032816 SNARE associated Golgi protein JHS88_05800 IPR028261 Dihydroprymidine dehydrogenase domain II JHS88_05800 IPR036188 FAD/NAD(P)-binding domain superfamily JHS88_05800 IPR023753 FAD/NAD(P)-binding domain JHS88_05800 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 JHS88_05800 IPR009051 Alpha-helical ferredoxin JHS88_05810 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JHS88_05810 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JHS88_05810 IPR005467 Histidine kinase domain JHS88_05810 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_05810 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_05810 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JHS88_05815 IPR011006 CheY-like superfamily JHS88_05815 IPR001789 Signal transduction response regulator, receiver domain JHS88_05815 IPR000792 Transcription regulator LuxR, C-terminal JHS88_05815 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_05825 IPR010710 Protein of unknown function DUF1289 JHS88_05835 IPR029052 Metallo-dependent phosphatase-like JHS88_05835 IPR036907 5'-Nucleotidase, C-terminal domain superfamily JHS88_05835 IPR006179 5'-Nucleotidase/apyrase JHS88_05835 IPR006146 5'-Nucleotidase, conserved site JHS88_05835 IPR008334 5'-Nucleotidase, C-terminal JHS88_05835 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type JHS88_05850 IPR020055 Ribosomal protein L25, short-form JHS88_05850 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal JHS88_05850 IPR029751 Ribosomal protein L25 JHS88_05850 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily JHS88_05855 IPR003660 HAMP domain JHS88_05855 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_05855 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_05855 IPR005467 Histidine kinase domain JHS88_05855 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JHS88_05855 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JHS88_05860 IPR011006 CheY-like superfamily JHS88_05860 IPR001867 OmpR/PhoB-type DNA-binding domain JHS88_05860 IPR016032 Signal transduction response regulator, C-terminal effector JHS88_05860 IPR001789 Signal transduction response regulator, receiver domain JHS88_05860 IPR039420 Transcriptional regulatory protein WalR-like JHS88_05860 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_05870 IPR011332 Zinc-binding ribosomal protein JHS88_05870 IPR001650 Helicase, C-terminal JHS88_05870 IPR006935 Helicase/UvrB, N-terminal JHS88_05870 IPR014001 Helicase superfamily 1/2, ATP-binding domain JHS88_05870 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_05875 IPR020103 Pseudouridine synthase, catalytic domain superfamily JHS88_05875 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain JHS88_05875 IPR006145 Pseudouridine synthase, RsuA/RluA JHS88_05875 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F JHS88_05875 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site JHS88_05875 IPR002942 RNA-binding S4 domain JHS88_05875 IPR036986 RNA-binding S4 domain superfamily JHS88_05880 IPR004734 Multidrug resistance protein JHS88_05880 IPR036259 MFS transporter superfamily JHS88_05880 IPR011701 Major facilitator superfamily JHS88_05880 IPR004812 Drug resistance transporter Bcr/CmlA subfamily JHS88_05880 IPR020846 Major facilitator superfamily domain JHS88_05895 IPR020015 Decaheme cytochrome, c-type, DmsE JHS88_05895 IPR011031 Multihaem cytochrome JHS88_05895 IPR036280 Multiheme cytochrome superfamily JHS88_05895 IPR010177 Doubled CXXCH motif JHS88_05905 IPR025668 Transposase DDE domain JHS88_05915 IPR038266 NapC/NirT cytochrome c superfamily JHS88_05915 IPR005126 NapC/NirT cytochrome c, N-terminal JHS88_05915 IPR036280 Multiheme cytochrome superfamily JHS88_05915 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK JHS88_05915 IPR011031 Multihaem cytochrome JHS88_05925 IPR002528 Multi antimicrobial extrusion protein JHS88_05930 IPR003593 AAA+ ATPase domain JHS88_05930 IPR003439 ABC transporter-like JHS88_05930 IPR017871 ABC transporter, conserved site JHS88_05930 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_05945 IPR023171 Na/H antiporter domain superfamily JHS88_05945 IPR004670 Na+/H+ antiporter NhaA JHS88_05950 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JHS88_05950 IPR001647 DNA-binding HTH domain, TetR-type JHS88_05950 IPR009057 Homeobox-like domain superfamily JHS88_05950 IPR023772 DNA-binding HTH domain, TetR-type, conserved site JHS88_05950 IPR032551 HTH-type transcriptional repressor, C-terminal JHS88_05955 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal JHS88_05955 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal JHS88_05955 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain JHS88_05955 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal JHS88_05955 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily JHS88_05955 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily JHS88_05955 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type JHS88_05960 IPR024906 Enoyl reductase FAD binding domain JHS88_05960 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative JHS88_05960 IPR010758 Trans-2-enoyl-CoA reductase JHS88_05965 IPR006512 YidE/YbjL duplication JHS88_05965 IPR006037 Regulator of K+ conductance, C-terminal JHS88_05965 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily JHS88_05965 IPR023017 Transport protein YbjL, putative JHS88_05970 IPR002109 Glutaredoxin JHS88_05970 IPR014025 Glutaredoxin subgroup JHS88_05970 IPR011902 Glutaredoxin, GrxA JHS88_05970 IPR036249 Thioredoxin-like superfamily JHS88_05975 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA JHS88_05975 IPR018211 Alcohol dehydrogenase, iron-type, conserved site JHS88_05975 IPR039697 Iron-type alcohol dehydrogenase-like JHS88_05980 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_05980 IPR001347 Sugar isomerase (SIS) JHS88_05980 IPR035472 RpiR-like, SIS domain JHS88_05980 IPR009057 Homeobox-like domain superfamily JHS88_05980 IPR000281 Helix-turn-helix protein RpiR JHS88_05985 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent JHS88_05985 IPR002129 Pyridoxal phosphate-dependent decarboxylase JHS88_05985 IPR015424 Pyridoxal phosphate-dependent transferase JHS88_05985 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JHS88_05995 IPR005642 Lysine exporter LysO JHS88_06005 IPR007077 TfoX, C-terminal JHS88_06005 IPR026256 Transcriptional regulator, TfoX/Sxy-type JHS88_06005 IPR007076 TfoX, N-terminal JHS88_06020 IPR005467 Histidine kinase domain JHS88_06020 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JHS88_06020 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_06020 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JHS88_06020 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JHS88_06020 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_06020 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JHS88_06030 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site JHS88_06030 IPR022278 Phosphoserine aminotransferase JHS88_06030 IPR015424 Pyridoxal phosphate-dependent transferase JHS88_06030 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JHS88_06030 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JHS88_06030 IPR000192 Aminotransferase class V domain JHS88_06035 IPR011780 D-serine ammonia-lyase JHS88_06035 IPR001926 Pyridoxal-phosphate dependent enzyme JHS88_06035 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site JHS88_06035 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme JHS88_06040 IPR003439 ABC transporter-like JHS88_06040 IPR017871 ABC transporter, conserved site JHS88_06040 IPR011527 ABC transporter type 1, transmembrane domain JHS88_06040 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_06040 IPR036640 ABC transporter type 1, transmembrane domain superfamily JHS88_06040 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC JHS88_06040 IPR003593 AAA+ ATPase domain JHS88_06045 IPR011527 ABC transporter type 1, transmembrane domain JHS88_06045 IPR036640 ABC transporter type 1, transmembrane domain superfamily JHS88_06045 IPR003439 ABC transporter-like JHS88_06045 IPR017871 ABC transporter, conserved site JHS88_06045 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD JHS88_06045 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_06045 IPR039421 Type I protein exporter JHS88_06045 IPR003593 AAA+ ATPase domain JHS88_06050 IPR005982 Thioredoxin reductase JHS88_06050 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site JHS88_06050 IPR036188 FAD/NAD(P)-binding domain superfamily JHS88_06050 IPR023753 FAD/NAD(P)-binding domain JHS88_06060 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site JHS88_06060 IPR000192 Aminotransferase class V domain JHS88_06060 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JHS88_06060 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JHS88_06060 IPR010970 Cysteine desulfurase, SufS JHS88_06060 IPR015424 Pyridoxal phosphate-dependent transferase JHS88_06070 IPR029787 Nucleotide cyclase JHS88_06070 IPR000160 GGDEF domain JHS88_06070 IPR011006 CheY-like superfamily JHS88_06070 IPR001789 Signal transduction response regulator, receiver domain JHS88_06075 IPR001898 Solute carrier family 13 JHS88_06075 IPR031312 Sodium/sulphate symporter, conserved site JHS88_06080 IPR003848 Domain of unknown function DUF218 JHS88_06080 IPR023604 Uncharacterised protein family SanA JHS88_06085 IPR036291 NAD(P)-binding domain superfamily JHS88_06085 IPR001891 Malic oxidoreductase JHS88_06085 IPR012302 Malic enzyme, NAD-binding JHS88_06085 IPR037062 Malic enzyme, N-terminal domain superfamily JHS88_06085 IPR023667 NAD-dependent malic enzyme, proteobacteria JHS88_06085 IPR012301 Malic enzyme, N-terminal domain JHS88_06085 IPR015884 Malic enzyme, conserved site JHS88_06090 IPR042035 DEAH helicase, winged-helix domain JHS88_06090 IPR011545 DEAD/DEAH box helicase domain JHS88_06090 IPR011709 Domain of unknown function DUF1605 JHS88_06090 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_06090 IPR001650 Helicase, C-terminal JHS88_06090 IPR014001 Helicase superfamily 1/2, ATP-binding domain JHS88_06090 IPR007502 Helicase-associated domain JHS88_06095 IPR036541 Phospholipase A1 superfamily JHS88_06095 IPR003187 Phospholipase A1 JHS88_06105 IPR018946 Alkaline phosphatase D-related JHS88_06105 IPR008963 Purple acid phosphatase-like, N-terminal JHS88_06105 IPR032093 Phospholipase D, N-terminal JHS88_06105 IPR038607 PhoD-like superfamily JHS88_06105 IPR006311 Twin-arginine translocation pathway, signal sequence JHS88_06110 IPR028923 SAICAR synthetase/ADE2, N-terminal JHS88_06110 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type JHS88_06110 IPR018236 SAICAR synthetase, conserved site JHS88_06130 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel JHS88_06130 IPR006690 Outer membrane protein, OmpA-like, conserved site JHS88_06130 IPR036737 OmpA-like domain superfamily JHS88_06130 IPR008722 Outer membrane porin F, N-terminal JHS88_06130 IPR028974 TSP type-3 repeat JHS88_06130 IPR006664 Outer membrane protein, bacterial JHS88_06130 IPR006665 OmpA-like domain JHS88_06145 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JHS88_06145 IPR006094 FAD linked oxidase, N-terminal JHS88_06145 IPR009051 Alpha-helical ferredoxin JHS88_06145 IPR004113 FAD-linked oxidase, C-terminal JHS88_06145 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JHS88_06145 IPR036318 FAD-binding, type PCMH-like superfamily JHS88_06145 IPR016166 FAD-binding domain, PCMH-type JHS88_06145 IPR016164 FAD-linked oxidase-like, C-terminal JHS88_06150 IPR007318 Phospholipid methyltransferase JHS88_06160 IPR001106 Aromatic amino acid lyase JHS88_06160 IPR024083 Fumarase/histidase, N-terminal JHS88_06160 IPR005921 Histidine ammonia-lyase JHS88_06160 IPR008948 L-Aspartase-like JHS88_06160 IPR022313 Phenylalanine/histidine ammonia-lyases, active site JHS88_06165 IPR036190 Urocanase superfamily JHS88_06165 IPR035085 Urocanase, Rossmann-like domain JHS88_06165 IPR035400 Urocanase, N-terminal domain JHS88_06165 IPR023636 Urocanase conserved site JHS88_06165 IPR035401 Urocanase, C-terminal domain JHS88_06165 IPR038364 Urocanase, central domain superfamily JHS88_06165 IPR023637 Urocanase JHS88_06170 IPR005923 Formiminoglutamase JHS88_06170 IPR006035 Ureohydrolase JHS88_06170 IPR023696 Ureohydrolase domain superfamily JHS88_06170 IPR020855 Ureohydrolase, manganese-binding site JHS88_06175 IPR032466 Metal-dependent hydrolase JHS88_06175 IPR006680 Amidohydrolase-related JHS88_06175 IPR011059 Metal-dependent hydrolase, composite domain superfamily JHS88_06175 IPR005920 Imidazolonepropionase JHS88_06180 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_06180 IPR036390 Winged helix DNA-binding domain superfamily JHS88_06180 IPR011663 UbiC transcription regulator-associated JHS88_06180 IPR000524 Transcription regulator HTH, GntR JHS88_06180 IPR010248 Histidine utilization repressor JHS88_06180 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily JHS88_06195 IPR004154 Anticodon-binding JHS88_06195 IPR012947 Threonyl/alanyl tRNA synthetase, SAD JHS88_06195 IPR033728 Threonine-tRNA ligase catalytic core domain JHS88_06195 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily JHS88_06195 IPR002320 Threonine-tRNA ligase, class IIa JHS88_06195 IPR006195 Aminoacyl-tRNA synthetase, class II JHS88_06195 IPR004095 TGS JHS88_06195 IPR012675 Beta-grasp domain superfamily JHS88_06195 IPR036621 Anticodon-binding domain superfamily JHS88_06195 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) JHS88_06195 IPR012676 TGS-like JHS88_06200 IPR019813 Translation initiation factor 3, conserved site JHS88_06200 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily JHS88_06200 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily JHS88_06200 IPR001288 Translation initiation factor 3 JHS88_06200 IPR019815 Translation initiation factor 3, C-terminal JHS88_06200 IPR019814 Translation initiation factor 3, N-terminal JHS88_06205 IPR037229 Ribosomal protein L35 superfamily JHS88_06205 IPR001706 Ribosomal protein L35, non-mitochondrial JHS88_06205 IPR018265 Ribosomal protein L35, conserved site JHS88_06205 IPR021137 Ribosomal protein L35 JHS88_06210 IPR005813 Ribosomal protein L20 JHS88_06210 IPR035566 Ribosomal protein L20, C-terminal JHS88_06215 IPR002765 Uncharacterised protein family UPF0145 JHS88_06215 IPR035439 UPF0145 domain superfamily JHS88_06245 IPR000160 GGDEF domain JHS88_06245 IPR033424 Membrane-associated sensor domain JHS88_06245 IPR029787 Nucleotide cyclase JHS88_06250 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm JHS88_06250 IPR002319 Phenylalanyl-tRNA synthetase JHS88_06250 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial JHS88_06250 IPR006195 Aminoacyl-tRNA synthetase, class II JHS88_06250 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit JHS88_06250 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal JHS88_06255 IPR005146 B3/B4 tRNA-binding domain JHS88_06255 IPR009061 Putative DNA-binding domain superfamily JHS88_06255 IPR005121 Ferrodoxin-fold anticodon-binding domain JHS88_06255 IPR012340 Nucleic acid-binding, OB-fold JHS88_06255 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit JHS88_06255 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 JHS88_06255 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain JHS88_06255 IPR002547 tRNA-binding domain JHS88_06255 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain JHS88_06255 IPR005147 tRNA synthetase, B5-domain JHS88_06255 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily JHS88_06265 IPR020816 Histone-like DNA-binding protein, conserved site JHS88_06265 IPR000119 Histone-like DNA-binding protein JHS88_06265 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily JHS88_06265 IPR005684 Integration host factor, alpha subunit JHS88_06275 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification JHS88_06275 IPR025835 Thiopurine S-methyltransferase JHS88_06275 IPR008854 TPMT family JHS88_06275 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_06280 IPR013815 ATP-grasp fold, subdomain 1 JHS88_06280 IPR016185 Pre-ATP-grasp domain superfamily JHS88_06280 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type JHS88_06280 IPR011054 Rudiment single hybrid motif JHS88_06280 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase JHS88_06280 IPR011761 ATP-grasp fold JHS88_06285 IPR016192 APOBEC/CMP deaminase, zinc-binding JHS88_06285 IPR002125 Cytidine and deoxycytidylate deaminase domain JHS88_06285 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain JHS88_06285 IPR016193 Cytidine deaminase-like JHS88_06285 IPR006263 Cytidine deaminase, homodimeric JHS88_06285 IPR020797 Cytidine deaminase, bacteria JHS88_06290 IPR007300 CidB/LrgB family JHS88_06290 IPR005261 Conserved hypothetical protein CHP00659 JHS88_06295 IPR022957 Uncharacterised protein family UPF0299 JHS88_06295 IPR005538 LrgA/CidA family JHS88_06300 IPR034747 Exonuclease I, SH3-like domain JHS88_06300 IPR038649 Exonuclease I, SH3-like domain superfamily JHS88_06300 IPR036397 Ribonuclease H superfamily JHS88_06300 IPR023607 Exodeoxyribonuclease I JHS88_06300 IPR013620 Exodeoxyribonuclease I, C-terminal JHS88_06300 IPR013520 Exonuclease, RNase T/DNA polymerase III JHS88_06300 IPR012337 Ribonuclease H-like superfamily JHS88_06300 IPR034748 Exonuclease I, C-terminal alpha-helical domain JHS88_06305 IPR001991 Sodium:dicarboxylate symporter JHS88_06305 IPR036458 Sodium:dicarboxylate symporter superfamily JHS88_06310 IPR000534 Semialdehyde dehydrogenase, NAD-binding JHS88_06310 IPR016040 NAD(P)-binding domain JHS88_06310 IPR036291 NAD(P)-binding domain superfamily JHS88_06315 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic JHS88_06315 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal JHS88_06315 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like JHS88_06315 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily JHS88_06320 IPR003805 Adenosylcobinamide-GDP ribazoletransferase JHS88_06325 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase JHS88_06325 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_06330 IPR004449 Phosphohistidine phosphatase SixA JHS88_06330 IPR013078 Histidine phosphatase superfamily, clade-1 JHS88_06330 IPR029033 Histidine phosphatase superfamily JHS88_06340 IPR016681 Succinylglutamate desuccinylase JHS88_06340 IPR007036 Succinylglutamate desuccinylase/aspartoacylase JHS88_06345 IPR037294 ABC transporter, BtuC-like JHS88_06345 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC JHS88_06345 IPR000522 ABC transporter, permease protein, BtuC-like JHS88_06350 IPR003593 AAA+ ATPase domain JHS88_06350 IPR003439 ABC transporter-like JHS88_06350 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_06350 IPR023693 ABC transporter, vitamin B12, BtuD JHS88_06370 IPR036390 Winged helix DNA-binding domain superfamily JHS88_06370 IPR000847 Transcription regulator HTH, LysR JHS88_06370 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_06370 IPR005119 LysR, substrate-binding JHS88_06380 IPR002725 Protein of unknown function DUF45 JHS88_06385 IPR016909 Ribosomal RNA large subunit methyltransferase F JHS88_06385 IPR010286 METTL16/RlmF family JHS88_06385 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_06405 IPR000524 Transcription regulator HTH, GntR JHS88_06405 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_06405 IPR036390 Winged helix DNA-binding domain superfamily JHS88_06405 IPR008920 Transcription regulator FadR/GntR, C-terminal JHS88_06410 IPR016162 Aldehyde dehydrogenase, N-terminal JHS88_06410 IPR016163 Aldehyde dehydrogenase, C-terminal JHS88_06410 IPR016161 Aldehyde/histidinol dehydrogenase JHS88_06410 IPR015590 Aldehyde dehydrogenase domain JHS88_06415 IPR008794 Proline racemase family JHS88_06430 IPR036291 NAD(P)-binding domain superfamily JHS88_06430 IPR003462 Ornithine cyclodeaminase/mu-crystallin JHS88_06430 IPR023401 Ornithine cyclodeaminase, N-terminal JHS88_06435 IPR020624 Schiff base-forming aldolase, conserved site JHS88_06435 IPR020625 Schiff base-forming aldolase, active site JHS88_06435 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA JHS88_06435 IPR013785 Aldolase-type TIM barrel JHS88_06435 IPR002220 DapA-like JHS88_06440 IPR008995 Molybdate/tungstate binding, C-terminal JHS88_06440 IPR017871 ABC transporter, conserved site JHS88_06440 IPR003439 ABC transporter-like JHS88_06440 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit JHS88_06440 IPR013611 Transport-associated OB, type 2 JHS88_06440 IPR003593 AAA+ ATPase domain JHS88_06440 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_06440 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA JHS88_06445 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JHS88_06445 IPR035906 MetI-like superfamily JHS88_06450 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JHS88_06450 IPR035906 MetI-like superfamily JHS88_06460 IPR035986 PKD domain superfamily JHS88_06460 IPR000601 PKD domain JHS88_06460 IPR022409 PKD/Chitinase domain JHS88_06460 IPR013661 Peptidase M9, collagenase, N-terminal domain JHS88_06460 IPR013783 Immunoglobulin-like fold JHS88_06460 IPR002169 Peptidase M9A/M9B, collagenase, bacterial JHS88_06470 IPR003439 ABC transporter-like JHS88_06470 IPR017871 ABC transporter, conserved site JHS88_06470 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal JHS88_06470 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_06470 IPR003593 AAA+ ATPase domain JHS88_06475 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal JHS88_06475 IPR017871 ABC transporter, conserved site JHS88_06475 IPR003439 ABC transporter-like JHS88_06475 IPR003593 AAA+ ATPase domain JHS88_06475 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_06480 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JHS88_06480 IPR035906 MetI-like superfamily JHS88_06480 IPR025966 Oligopeptide transport permease C-like, N-terminal domain JHS88_06485 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JHS88_06485 IPR035906 MetI-like superfamily JHS88_06490 IPR030678 Peptide/nickel binding protein, MppA-type JHS88_06490 IPR023765 Solute-binding protein family 5, conserved site JHS88_06490 IPR000914 Solute-binding protein family 5 domain JHS88_06490 IPR039424 Solute-binding protein family 5 JHS88_06495 IPR002933 Peptidase M20 JHS88_06495 IPR036264 Bacterial exopeptidase dimerisation domain JHS88_06495 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site JHS88_06495 IPR010162 Peptidase M20B, peptidase T-like JHS88_06495 IPR011650 Peptidase M20, dimerisation domain JHS88_06495 IPR008007 Peptidase M42 JHS88_06500 IPR037523 Vicinal oxygen chelate (VOC) domain JHS88_06500 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JHS88_06500 IPR005956 4-hydroxyphenylpyruvate dioxygenase JHS88_06500 IPR041735 4-hydroxyphenylpyruvate dioxygenase, C-terminal JHS88_06500 IPR041736 4-hydroxyphenylpyruvate dioxygenase, N-terminal JHS88_06500 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JHS88_06505 IPR005708 Homogentisate 1,2-dioxygenase JHS88_06505 IPR014710 RmlC-like jelly roll fold JHS88_06505 IPR011051 RmlC-like cupin domain superfamily JHS88_06515 IPR036249 Thioredoxin-like superfamily JHS88_06515 IPR010987 Glutathione S-transferase, C-terminal-like JHS88_06515 IPR034330 Glutathione S-transferases, class Zeta , C-terminal JHS88_06515 IPR005955 Glutathione S-transferases, class Zeta JHS88_06515 IPR004046 Glutathione S-transferase, C-terminal JHS88_06515 IPR004045 Glutathione S-transferase, N-terminal JHS88_06515 IPR040079 Glutathione Transferase family JHS88_06515 IPR036282 Glutathione S-transferase, C-terminal domain superfamily JHS88_06515 IPR034333 Glutathione S-transferases, class Zeta , N-terminal JHS88_06555 IPR030802 ABC transporter permease MalE JHS88_06555 IPR003453 ABC transport permease subunit MlaE, Proteobacteria JHS88_06560 IPR003593 AAA+ ATPase domain JHS88_06560 IPR003439 ABC transporter-like JHS88_06560 IPR017871 ABC transporter, conserved site JHS88_06560 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl JHS88_06560 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_06575 IPR006686 Mechanosensitive ion channel MscS, conserved site JHS88_06575 IPR010920 LSM domain superfamily JHS88_06575 IPR025692 Mechanosensitive ion channel inner membrane domain 1 JHS88_06575 IPR023408 Mechanosensitive ion channel MscS domain superfamily JHS88_06575 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 JHS88_06575 IPR011066 Mechanosensitive ion channel MscS, C-terminal JHS88_06575 IPR006685 Mechanosensitive ion channel MscS JHS88_06575 IPR024393 Mechanosensitive ion channel MscS, porin domain JHS88_06590 IPR039562 Membrane fusion protein, biotin-lipoyl like domain JHS88_06590 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA JHS88_06590 IPR006143 RND efflux pump, membrane fusion protein JHS88_06605 IPR002293 Amino acid/polyamine transporter I JHS88_06615 IPR002293 Amino acid/polyamine transporter I JHS88_06615 IPR004754 Amino acid antiporter JHS88_06615 IPR027566 Putrescine transporter PotE JHS88_06625 IPR025668 Transposase DDE domain JHS88_06635 IPR005119 LysR, substrate-binding JHS88_06635 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_06635 IPR036390 Winged helix DNA-binding domain superfamily JHS88_06635 IPR000847 Transcription regulator HTH, LysR JHS88_06640 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site JHS88_06640 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria JHS88_06640 IPR011650 Peptidase M20, dimerisation domain JHS88_06640 IPR002933 Peptidase M20 JHS88_06640 IPR036264 Bacterial exopeptidase dimerisation domain JHS88_06660 IPR029033 Histidine phosphatase superfamily JHS88_06660 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site JHS88_06660 IPR023086 Phosphoglycerate mutase, GpmB, probable JHS88_06660 IPR013078 Histidine phosphatase superfamily, clade-1 JHS88_06675 IPR031312 Sodium/sulphate symporter, conserved site JHS88_06675 IPR001898 Solute carrier family 13 JHS88_06680 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JHS88_06680 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JHS88_06680 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JHS88_06680 IPR005467 Histidine kinase domain JHS88_06680 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_06680 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_06680 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JHS88_06685 IPR011006 CheY-like superfamily JHS88_06685 IPR009057 Homeobox-like domain superfamily JHS88_06685 IPR002197 DNA binding HTH domain, Fis-type JHS88_06685 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_06685 IPR001789 Signal transduction response regulator, receiver domain JHS88_06685 IPR002078 RNA polymerase sigma factor 54 interaction domain JHS88_06685 IPR025944 Sigma-54 interaction domain, conserved site JHS88_06690 IPR029787 Nucleotide cyclase JHS88_06690 IPR035965 PAS domain superfamily JHS88_06690 IPR005330 MHYT domain JHS88_06690 IPR035919 EAL domain superfamily JHS88_06690 IPR001633 EAL domain JHS88_06690 IPR000160 GGDEF domain JHS88_06695 IPR037522 HD-GYP domain JHS88_06695 IPR021812 Protein of unknown function DUF3391 JHS88_06695 IPR003607 HD/PDEase domain JHS88_06695 IPR006674 HD domain JHS88_06695 IPR006675 HDIG domain JHS88_06700 IPR001123 Amino acid exporter protein, LeuE-type JHS88_06700 IPR004778 Homoserine/Threonine efflux protein JHS88_06705 IPR016905 Glycyl radical enzyme, HI0521, predicted JHS88_06710 IPR012839 Organic radical enzyme activase JHS88_06710 IPR001989 Radical-activating enzyme, conserved site JHS88_06710 IPR007197 Radical SAM JHS88_06710 IPR034457 Organic radical-activating enzymes JHS88_06710 IPR023912 Putative glycyl-radical enzyme activating enzyme YjjW JHS88_06710 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JHS88_06710 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JHS88_06710 IPR013785 Aldolase-type TIM barrel JHS88_06720 IPR005496 Integral membrane protein TerC JHS88_06725 IPR011055 Duplicated hybrid motif JHS88_06725 IPR018392 LysM domain JHS88_06725 IPR013731 Opacity-associated protein A, N-terminal JHS88_06725 IPR016047 Peptidase M23 JHS88_06750 IPR002078 RNA polymerase sigma factor 54 interaction domain JHS88_06750 IPR029995 Transcriptional activator SfnR/FlbD JHS88_06750 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JHS88_06750 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 JHS88_06750 IPR001789 Signal transduction response regulator, receiver domain JHS88_06750 IPR025944 Sigma-54 interaction domain, conserved site JHS88_06750 IPR002197 DNA binding HTH domain, Fis-type JHS88_06750 IPR009057 Homeobox-like domain superfamily JHS88_06750 IPR011006 CheY-like superfamily JHS88_06750 IPR003593 AAA+ ATPase domain JHS88_06750 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_06755 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_06755 IPR041546 ClpA/ClpB, AAA lid domain JHS88_06755 IPR018368 ClpA/B, conserved site 1 JHS88_06755 IPR001270 ClpA/B family JHS88_06755 IPR004176 Clp, N-terminal JHS88_06755 IPR019489 Clp ATPase, C-terminal JHS88_06755 IPR017729 Type VI secretion system, ATPase ClpV1 JHS88_06755 IPR003959 ATPase, AAA-type, core JHS88_06755 IPR003593 AAA+ ATPase domain JHS88_06755 IPR036628 Clp, N-terminal domain superfamily JHS88_06760 IPR008514 Type VI secretion system effector, Hcp JHS88_06760 IPR036624 Hcp1-like superfamily JHS88_06765 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein JHS88_06765 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset JHS88_06765 IPR037026 Vgr protein, OB-fold domain superfamily JHS88_06765 IPR006531 Gp5 N-terminal JHS88_06790 IPR011009 Protein kinase-like domain superfamily JHS88_06790 IPR000719 Protein kinase domain JHS88_06790 IPR017441 Protein kinase, ATP binding site JHS88_06790 IPR008271 Serine/threonine-protein kinase, active site JHS88_06790 IPR023507 Serine/threonine protein kinase PknD JHS88_06790 IPR011990 Tetratricopeptide-like helical domain superfamily JHS88_06805 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath JHS88_06815 IPR010272 Type VI secretion system, TssF-like JHS88_06825 IPR019885 Transcription regulator HTH, AsnC-type, conserved site JHS88_06825 IPR036390 Winged helix DNA-binding domain superfamily JHS88_06825 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_06825 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain JHS88_06825 IPR019888 Transcription regulator AsnC-type JHS88_06825 IPR011008 Dimeric alpha-beta barrel JHS88_06825 IPR000485 AsnC-type HTH domain JHS88_06825 IPR011991 ArsR-like helix-turn-helix domain JHS88_06855 IPR010263 Type VI secretion protein, VC_A0114 JHS88_06910 IPR003607 HD/PDEase domain JHS88_06910 IPR006674 HD domain JHS88_06910 IPR037522 HD-GYP domain JHS88_06910 IPR006675 HDIG domain JHS88_06915 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA JHS88_06915 IPR018211 Alcohol dehydrogenase, iron-type, conserved site JHS88_06915 IPR039697 Iron-type alcohol dehydrogenase-like JHS88_06920 IPR013061 Tryptophan/tryrosine permease, conserved site JHS88_06920 IPR013059 Tryptophan/tyrosine transporter JHS88_06920 IPR018227 Amino acid/polyamine transporter 2 JHS88_06940 IPR003593 AAA+ ATPase domain JHS88_06940 IPR039421 Type I protein exporter JHS88_06940 IPR036640 ABC transporter type 1, transmembrane domain superfamily JHS88_06940 IPR011527 ABC transporter type 1, transmembrane domain JHS88_06940 IPR003439 ABC transporter-like JHS88_06940 IPR017871 ABC transporter, conserved site JHS88_06940 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_06945 IPR039421 Type I protein exporter JHS88_06945 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_06945 IPR017871 ABC transporter, conserved site JHS88_06945 IPR036640 ABC transporter type 1, transmembrane domain superfamily JHS88_06945 IPR011527 ABC transporter type 1, transmembrane domain JHS88_06945 IPR003593 AAA+ ATPase domain JHS88_06945 IPR003439 ABC transporter-like JHS88_06970 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily JHS88_06970 IPR012725 Chaperone DnaK JHS88_06970 IPR018181 Heat shock protein 70, conserved site JHS88_06970 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily JHS88_06970 IPR013126 Heat shock protein 70 family JHS88_06975 IPR013126 Heat shock protein 70 family JHS88_06975 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily JHS88_06975 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily JHS88_06975 IPR018181 Heat shock protein 70, conserved site JHS88_06975 IPR012725 Chaperone DnaK JHS88_06985 IPR000160 GGDEF domain JHS88_06985 IPR033424 Membrane-associated sensor domain JHS88_06985 IPR029787 Nucleotide cyclase JHS88_07015 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site JHS88_07015 IPR006656 Molybdopterin oxidoreductase JHS88_07015 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal JHS88_07015 IPR006311 Twin-arginine translocation pathway, signal sequence JHS88_07015 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site JHS88_07015 IPR006657 Molybdopterin dinucleotide-binding domain JHS88_07015 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain JHS88_07015 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE JHS88_07015 IPR009010 Aspartate decarboxylase-like domain superfamily JHS88_07020 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JHS88_07020 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JHS88_07020 IPR014297 Dimethylsulphoxide reductase, chain B JHS88_07025 IPR007059 DMSO reductase anchor subunit (DmsC) JHS88_07030 IPR036411 TorD-like superfamily JHS88_07030 IPR020945 DMSO/Nitrate reductase chaperone JHS88_07030 IPR028611 Tat proofreading chaperone DmsD JHS88_07030 IPR026269 Tat proofreading chaperone DmsD-type JHS88_07040 IPR029039 Flavoprotein-like superfamily JHS88_07040 IPR003680 Flavodoxin-like fold JHS88_07040 IPR023048 NADH-azoreductase, FMN-dependent JHS88_07045 IPR001650 Helicase, C-terminal JHS88_07045 IPR010222 RNA helicase HrpA JHS88_07045 IPR003593 AAA+ ATPase domain JHS88_07045 IPR011545 DEAD/DEAH box helicase domain JHS88_07045 IPR011709 Domain of unknown function DUF1605 JHS88_07045 IPR007502 Helicase-associated domain JHS88_07045 IPR014001 Helicase superfamily 1/2, ATP-binding domain JHS88_07045 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_07045 IPR024590 RNA helicase HrpA, C-terminal JHS88_07060 IPR000060 BCCT transporter family JHS88_07060 IPR018093 BCCT transporter, conserved site JHS88_07070 IPR003362 Bacterial sugar transferase JHS88_07070 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase JHS88_07075 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA JHS88_07075 IPR001173 Glycosyltransferase 2-like JHS88_07075 IPR029044 Nucleotide-diphospho-sugar transferases JHS88_07080 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA JHS88_07080 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain JHS88_07080 IPR001296 Glycosyl transferase, family 1 JHS88_07110 IPR001296 Glycosyl transferase, family 1 JHS88_07110 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain JHS88_07115 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain JHS88_07115 IPR001296 Glycosyl transferase, family 1 JHS88_07120 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_07120 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JHS88_07120 IPR002197 DNA binding HTH domain, Fis-type JHS88_07120 IPR009057 Homeobox-like domain superfamily JHS88_07120 IPR011006 CheY-like superfamily JHS88_07120 IPR003593 AAA+ ATPase domain JHS88_07120 IPR025944 Sigma-54 interaction domain, conserved site JHS88_07120 IPR001789 Signal transduction response regulator, receiver domain JHS88_07120 IPR002078 RNA polymerase sigma factor 54 interaction domain JHS88_07135 IPR019554 Soluble ligand binding domain JHS88_07135 IPR003715 Polysaccharide export protein JHS88_07145 IPR014237 Anti-sigma F factor antagonist JHS88_07145 IPR036513 STAS domain superfamily JHS88_07145 IPR002645 STAS domain JHS88_07145 IPR003658 Anti-sigma factor antagonist JHS88_07150 IPR012310 DNA ligase, ATP-dependent, central JHS88_07150 IPR016059 DNA ligase, ATP-dependent, conserved site JHS88_07150 IPR029319 DNA ligase, OB-like domain JHS88_07150 IPR012340 Nucleic acid-binding, OB-fold JHS88_07160 IPR002528 Multi antimicrobial extrusion protein JHS88_07165 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily JHS88_07165 IPR026017 Lumazine-binding domain JHS88_07165 IPR017938 Riboflavin synthase-like beta-barrel JHS88_07165 IPR001783 Lumazine-binding protein JHS88_07175 IPR011009 Protein kinase-like domain superfamily JHS88_07175 IPR016477 Fructosamine/Ketosamine-3-kinase JHS88_07180 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase JHS88_07180 IPR001789 Signal transduction response regulator, receiver domain JHS88_07180 IPR011006 CheY-like superfamily JHS88_07180 IPR035909 Methylesterase CheB, C-terminal JHS88_07180 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type JHS88_07185 IPR000160 GGDEF domain JHS88_07185 IPR007894 MASE2 JHS88_07185 IPR029787 Nucleotide cyclase JHS88_07195 IPR000064 Endopeptidase, NLPC/P60 domain JHS88_07195 IPR038765 Papain-like cysteine peptidase superfamily JHS88_07200 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain JHS88_07200 IPR003660 HAMP domain JHS88_07200 IPR004090 Chemotaxis methyl-accepting receptor JHS88_07200 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JHS88_07200 IPR000727 Target SNARE coiled-coil homology domain JHS88_07235 IPR039262 DTW domain-containing protein 2 JHS88_07235 IPR005636 DTW JHS88_07240 IPR023505 N-acetyl-D-glucosamine kinase JHS88_07240 IPR000600 ROK family JHS88_07250 IPR036135 MoeA, N-terminal and linker domain superfamily JHS88_07250 IPR005110 MoeA, N-terminal and linker domain JHS88_07250 IPR005111 MoeA, C-terminal, domain IV JHS88_07250 IPR038987 Molybdopterin biosynthesis protein MoeA-like JHS88_07250 IPR008284 Molybdenum cofactor biosynthesis, conserved site JHS88_07250 IPR001453 MoaB/Mog domain JHS88_07250 IPR036425 MoaB/Mog-like domain superfamily JHS88_07250 IPR036688 MoeA, C-terminal, domain IV superfamily JHS88_07255 IPR025877 MobA-like NTP transferase JHS88_07255 IPR013482 Molybdenum cofactor guanylyltransferase JHS88_07255 IPR029044 Nucleotide-diphospho-sugar transferases JHS88_07260 IPR013611 Transport-associated OB, type 2 JHS88_07260 IPR008995 Molybdate/tungstate binding, C-terminal JHS88_07260 IPR015853 ABC transporter, ferric cation import, FbpC JHS88_07260 IPR017871 ABC transporter, conserved site JHS88_07260 IPR003439 ABC transporter-like JHS88_07260 IPR003593 AAA+ ATPase domain JHS88_07260 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_07265 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JHS88_07265 IPR035906 MetI-like superfamily JHS88_07270 IPR024370 PBP domain JHS88_07275 IPR025944 Sigma-54 interaction domain, conserved site JHS88_07275 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 JHS88_07275 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JHS88_07275 IPR001789 Signal transduction response regulator, receiver domain JHS88_07275 IPR003593 AAA+ ATPase domain JHS88_07275 IPR011006 CheY-like superfamily JHS88_07275 IPR009057 Homeobox-like domain superfamily JHS88_07275 IPR002078 RNA polymerase sigma factor 54 interaction domain JHS88_07275 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_07275 IPR002197 DNA binding HTH domain, Fis-type JHS88_07280 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JHS88_07280 IPR029151 Periplasmic sensor-like domain superfamily JHS88_07280 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JHS88_07280 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_07280 IPR005467 Histidine kinase domain JHS88_07280 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_07280 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JHS88_07285 IPR003439 ABC transporter-like JHS88_07285 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_07285 IPR032781 ABC-transporter extension domain JHS88_07285 IPR003593 AAA+ ATPase domain JHS88_07290 IPR016193 Cytidine deaminase-like JHS88_07290 IPR003786 Sulfur carrier protein FdhD JHS88_07310 IPR023069 Chaperone TorD JHS88_07310 IPR020945 DMSO/Nitrate reductase chaperone JHS88_07310 IPR036386 HscB, C-terminal domain superfamily JHS88_07310 IPR036411 TorD-like superfamily JHS88_07320 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site JHS88_07320 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site JHS88_07320 IPR009010 Aspartate decarboxylase-like domain superfamily JHS88_07320 IPR006443 Formate dehydrogenase-N, alpha subunit JHS88_07320 IPR006657 Molybdopterin dinucleotide-binding domain JHS88_07320 IPR006656 Molybdopterin oxidoreductase JHS88_07320 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain JHS88_07320 IPR006311 Twin-arginine translocation pathway, signal sequence JHS88_07325 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JHS88_07325 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JHS88_07325 IPR000813 7Fe ferredoxin JHS88_07340 IPR006530 YD repeat JHS88_07340 IPR031325 RHS repeat JHS88_07340 IPR022385 Rhs repeat-associated core JHS88_07340 IPR001826 RHS protein JHS88_07360 IPR029020 Ammonium/urea transporter JHS88_07360 IPR018047 Ammonium transporter, conserved site JHS88_07360 IPR024041 Ammonium transporter AmtB-like domain JHS88_07360 IPR001905 Ammonium transporter JHS88_07370 IPR003000 Sirtuin family JHS88_07370 IPR026591 Sirtuin, catalytic core small domain superfamily JHS88_07370 IPR027546 Sirtuin, class III JHS88_07370 IPR026590 Sirtuin family, catalytic core domain JHS88_07370 IPR029035 DHS-like NAD/FAD-binding domain superfamily JHS88_07375 IPR006059 Bacterial extracellular solute-binding protein JHS88_07375 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein JHS88_07380 IPR006059 Bacterial extracellular solute-binding protein JHS88_07380 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein JHS88_07385 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JHS88_07385 IPR035906 MetI-like superfamily JHS88_07390 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JHS88_07390 IPR035906 MetI-like superfamily JHS88_07395 IPR013611 Transport-associated OB, type 2 JHS88_07395 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit JHS88_07395 IPR008995 Molybdate/tungstate binding, C-terminal JHS88_07395 IPR017871 ABC transporter, conserved site JHS88_07395 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_07395 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA JHS88_07395 IPR003439 ABC transporter-like JHS88_07395 IPR003593 AAA+ ATPase domain JHS88_07415 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type JHS88_07415 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JHS88_07415 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal JHS88_07415 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase JHS88_07420 IPR006016 UspA JHS88_07425 IPR036390 Winged helix DNA-binding domain superfamily JHS88_07425 IPR018490 Cyclic nucleotide-binding-like JHS88_07425 IPR000595 Cyclic nucleotide-binding domain JHS88_07425 IPR012318 Crp-type HTH domain JHS88_07425 IPR014710 RmlC-like jelly roll fold JHS88_07425 IPR018335 Transcription regulator HTH, Crp-type, conserved site JHS88_07425 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_07440 IPR036163 Heavy metal-associated domain superfamily JHS88_07440 IPR027256 P-type ATPase, subfamily IB JHS88_07440 IPR023214 HAD superfamily JHS88_07440 IPR006121 Heavy metal-associated domain, HMA JHS88_07440 IPR001757 P-type ATPase JHS88_07440 IPR017969 Heavy-metal-associated, conserved site JHS88_07440 IPR036412 HAD-like superfamily JHS88_07440 IPR008250 P-type ATPase, A domain superfamily JHS88_07440 IPR023298 P-type ATPase, transmembrane domain superfamily JHS88_07440 IPR018303 P-type ATPase, phosphorylation site JHS88_07440 IPR023299 P-type ATPase, cytoplasmic domain N JHS88_07450 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal JHS88_07450 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily JHS88_07450 IPR009056 Cytochrome c-like domain JHS88_07450 IPR036909 Cytochrome c-like domain superfamily JHS88_07450 IPR008168 Cytochrome c, class IC JHS88_07450 IPR004678 Cytochrome c oxidase cbb3-type, subunit III JHS88_07465 IPR004677 Cytochrome c oxidase cbb3-type, subunit I JHS88_07465 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site JHS88_07465 IPR000883 Cytochrome c oxidase subunit I JHS88_07465 IPR023616 Cytochrome c oxidase-like, subunit I domain JHS88_07465 IPR036927 Cytochrome c oxidase-like, subunit I superfamily JHS88_07480 IPR001789 Signal transduction response regulator, receiver domain JHS88_07480 IPR011006 CheY-like superfamily JHS88_07480 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_07480 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_07480 IPR005467 Histidine kinase domain JHS88_07480 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JHS88_07480 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JHS88_07480 IPR015387 LuxQ, periplasmic JHS88_07480 IPR035965 PAS domain superfamily JHS88_07480 IPR029151 Periplasmic sensor-like domain superfamily JHS88_07480 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JHS88_07550 IPR035375 MatP, C-terminal ribbon-helix-helix domain JHS88_07550 IPR009390 Macrodomain Ter protein, MatP JHS88_07550 IPR035087 MatP, N-terminal JHS88_07550 IPR013321 Arc-type ribbon-helix-helix JHS88_07550 IPR038339 MatP, N-terminal domain superfamily JHS88_07555 IPR027065 Lon protease JHS88_07555 IPR008269 Peptidase S16, Lon proteolytic domain JHS88_07555 IPR020568 Ribosomal protein S5 domain 2-type fold JHS88_07555 IPR041699 Lon protease, AAA domain JHS88_07555 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JHS88_07560 IPR029069 HotDog domain superfamily JHS88_07560 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ JHS88_07560 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA JHS88_07565 IPR007040 Ribosome modulation factor JHS88_07565 IPR023200 Ribosome modulation factor domain superfamily JHS88_07575 IPR003593 AAA+ ATPase domain JHS88_07575 IPR032524 ABC transporter Uup, C-terminal JHS88_07575 IPR032781 ABC-transporter extension domain JHS88_07575 IPR003439 ABC transporter-like JHS88_07575 IPR017871 ABC transporter, conserved site JHS88_07575 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_07575 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily JHS88_07585 IPR002052 DNA methylase, N-6 adenine-specific, conserved site JHS88_07585 IPR017244 Ribosomal RNA large subunit methyltransferase K/L JHS88_07585 IPR000241 Putative RNA methylase domain JHS88_07585 IPR019614 S-adenosylmethionine-dependent methyltransferase JHS88_07585 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_07585 IPR004114 THUMP domain JHS88_07590 IPR009809 Cell division protein ZapC JHS88_07595 IPR013785 Aldolase-type TIM barrel JHS88_07595 IPR005720 Dihydroorotate dehydrogenase domain JHS88_07595 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 JHS88_07595 IPR005719 Dihydroorotate dehydrogenase, class 2 JHS88_07595 IPR001295 Dihydroorotate dehydrogenase, conserved site JHS88_07600 IPR007780 NAD-glutamate dehydrogenase, bacteria JHS88_07600 IPR028971 NAD-glutamate dehydrogenase JHS88_07600 IPR036291 NAD(P)-binding domain superfamily JHS88_07610 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase JHS88_07610 IPR042097 Aminopeptidase N-like , N-terminal JHS88_07610 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal JHS88_07610 IPR027268 Peptidase M4/M1, CTD superfamily JHS88_07610 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold JHS88_07610 IPR012779 Peptidase M1, alanyl aminopeptidase JHS88_07610 IPR014782 Peptidase M1, membrane alanine aminopeptidase JHS88_07610 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily JHS88_07610 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily JHS88_07620 IPR020992 Tail specific protease, C-terminal JHS88_07620 IPR040573 Tail specific protease, N-terminal domain JHS88_07620 IPR029045 ClpP/crotonase-like domain superfamily JHS88_07620 IPR001478 PDZ domain JHS88_07620 IPR036034 PDZ superfamily JHS88_07620 IPR004447 C-terminal-processing peptidase S41A JHS88_07620 IPR005151 Tail specific protease JHS88_07625 IPR016103 ProQ/FinO domain JHS88_07625 IPR023529 RNA chaperone ProQ JHS88_07625 IPR035236 RNA chaperone ProQ, C-terminal JHS88_07625 IPR036442 ProQ/FinO domain superfamily JHS88_07630 IPR000614 Free Met sulfoxide reductase conserved site JHS88_07630 IPR003018 GAF domain JHS88_07630 IPR029016 GAF-like domain superfamily JHS88_07635 IPR036640 ABC transporter type 1, transmembrane domain superfamily JHS88_07635 IPR017871 ABC transporter, conserved site JHS88_07635 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_07635 IPR039421 Type I protein exporter JHS88_07635 IPR011527 ABC transporter type 1, transmembrane domain JHS88_07635 IPR003593 AAA+ ATPase domain JHS88_07635 IPR003439 ABC transporter-like JHS88_07640 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type JHS88_07640 IPR007498 Intermembrane transport protein PqiA-like JHS88_07640 IPR011031 Multihaem cytochrome JHS88_07645 IPR003399 Mce/MlaD JHS88_07650 IPR011023 Nop2p JHS88_07650 IPR023545 rRNA small subunit methyltransferase F JHS88_07650 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site JHS88_07650 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal JHS88_07650 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type JHS88_07650 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain JHS88_07650 IPR023267 RNA (C5-cytosine) methyltransferase JHS88_07650 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_07670 IPR006219 DHAP synthase, class 1 JHS88_07670 IPR006218 DAHP synthetase I/KDSA JHS88_07670 IPR013785 Aldolase-type TIM barrel JHS88_07675 IPR007551 Protein of unknown function DUF520 JHS88_07675 IPR036183 YajQ-like superfamily JHS88_07675 IPR035571 UPF0234-like, C-terminal JHS88_07675 IPR035570 UPF0234, N-terminal JHS88_07680 IPR000878 Tetrapyrrole methylase JHS88_07680 IPR006366 Uroporphyrin-III C-methyltransferase JHS88_07680 IPR019478 Sirohaem synthase, dimerisation domain JHS88_07680 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site JHS88_07680 IPR028281 Siroheme synthase, central domain JHS88_07680 IPR012409 Sirohaem synthase JHS88_07680 IPR037115 Sirohaem synthase, dimerisation domain superfamily JHS88_07680 IPR036291 NAD(P)-binding domain superfamily JHS88_07680 IPR014776 Tetrapyrrole methylase, subdomain 2 JHS88_07680 IPR014777 Tetrapyrrole methylase, subdomain 1 JHS88_07680 IPR006367 Sirohaem synthase, N-terminal JHS88_07680 IPR035996 Tetrapyrrole methylase superfamily JHS88_07685 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter JHS88_07685 IPR018313 Solute-binding protein family 3, conserved site JHS88_07685 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JHS88_07690 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain JHS88_07690 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JHS88_07690 IPR035906 MetI-like superfamily JHS88_07695 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain JHS88_07695 IPR035906 MetI-like superfamily JHS88_07695 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JHS88_07700 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type JHS88_07700 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_07700 IPR017871 ABC transporter, conserved site JHS88_07700 IPR003439 ABC transporter-like JHS88_07700 IPR003593 AAA+ ATPase domain JHS88_07705 IPR006214 Bax inhibitor 1-related JHS88_07715 IPR042072 DsrC-like protein, C-terminal domain JHS88_07715 IPR007453 Sulphur transfer protein DsrC/TusE JHS88_07715 IPR025526 DsrC-like domain superfamily JHS88_07720 IPR017968 Acylphosphatase, conserved site JHS88_07720 IPR036046 Acylphosphatase-like domain superfamily JHS88_07720 IPR001792 Acylphosphatase-like domain JHS88_07720 IPR020456 Acylphosphatase JHS88_07725 IPR033479 Double Cache domain 1 JHS88_07725 IPR003660 HAMP domain JHS88_07725 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JHS88_07725 IPR029151 Periplasmic sensor-like domain superfamily JHS88_07730 IPR002478 PUA domain JHS88_07730 IPR015947 PUA-like superfamily JHS88_07730 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_07730 IPR019614 S-adenosylmethionine-dependent methyltransferase JHS88_07730 IPR023542 rRNA large subunit methyltransferase I JHS88_07730 IPR041532 RlmI, PUA-like domain JHS88_07730 IPR036974 PUA domain superfamily JHS88_07745 IPR006665 OmpA-like domain JHS88_07745 IPR006690 Outer membrane protein, OmpA-like, conserved site JHS88_07745 IPR008722 Outer membrane porin F, N-terminal JHS88_07745 IPR028974 TSP type-3 repeat JHS88_07745 IPR006664 Outer membrane protein, bacterial JHS88_07745 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel JHS88_07745 IPR036737 OmpA-like domain superfamily JHS88_07760 IPR028974 TSP type-3 repeat JHS88_07760 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel JHS88_07760 IPR006664 Outer membrane protein, bacterial JHS88_07760 IPR008722 Outer membrane porin F, N-terminal JHS88_07760 IPR036737 OmpA-like domain superfamily JHS88_07760 IPR006690 Outer membrane protein, OmpA-like, conserved site JHS88_07760 IPR006665 OmpA-like domain JHS88_07770 IPR000160 GGDEF domain JHS88_07770 IPR029787 Nucleotide cyclase JHS88_07770 IPR033424 Membrane-associated sensor domain JHS88_07775 IPR018317 Queuosine biosynthesis protein QueC JHS88_07775 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JHS88_07780 IPR024924 7-carboxy-7-deazaguanine synthase-like JHS88_07780 IPR007197 Radical SAM JHS88_07780 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria JHS88_07780 IPR013785 Aldolase-type TIM barrel JHS88_07785 IPR006379 HAD-superfamily hydrolase, subfamily IIB JHS88_07785 IPR023214 HAD superfamily JHS88_07785 IPR000150 Cof family JHS88_07785 IPR036412 HAD-like superfamily JHS88_07795 IPR001254 Serine proteases, trypsin domain JHS88_07795 IPR018114 Serine proteases, trypsin family, histidine active site JHS88_07795 IPR033116 Serine proteases, trypsin family, serine active site JHS88_07795 IPR009003 Peptidase S1, PA clan JHS88_07795 IPR001314 Peptidase S1A, chymotrypsin family JHS88_07800 IPR023072 Acetyltransferase, YpeA JHS88_07800 IPR016181 Acyl-CoA N-acyltransferase JHS88_07800 IPR000182 GNAT domain JHS88_07805 IPR000873 AMP-dependent synthetase/ligase JHS88_07805 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain JHS88_07805 IPR020845 AMP-binding, conserved site JHS88_07805 IPR042099 AMP-dependent synthetase-like superfamily JHS88_07805 IPR025110 AMP-binding enzyme, C-terminal domain JHS88_07810 IPR007400 PrpF protein JHS88_07810 IPR012709 2-methyl-aconitate isomerase PrpF JHS88_07815 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain JHS88_07815 IPR036008 Aconitase, iron-sulfur domain JHS88_07815 IPR006249 Aconitase/Iron-responsive element-binding protein 2 JHS88_07815 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel JHS88_07815 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain JHS88_07815 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 JHS88_07815 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent JHS88_07820 IPR011278 2-methylcitrate synthase/citrate synthase type I JHS88_07820 IPR016142 Citrate synthase-like, large alpha subdomain JHS88_07820 IPR016143 Citrate synthase-like, small alpha subdomain JHS88_07820 IPR019810 Citrate synthase active site JHS88_07820 IPR002020 Citrate synthase JHS88_07820 IPR036969 Citrate synthase superfamily JHS88_07820 IPR024176 Citrate synthase, bacterial-type JHS88_07825 IPR039556 ICL/PEPM domain JHS88_07825 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site JHS88_07825 IPR040442 Pyruvate kinase-like domain superfamily JHS88_07825 IPR012695 2-methylisocitrate lyase JHS88_07825 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily JHS88_07850 IPR002823 Protein of unknown function DUF112, transmembrane JHS88_07855 IPR002781 Transmembrane protein TauE-like JHS88_07865 IPR008898 YopD-like JHS88_07875 IPR011990 Tetratricopeptide-like helical domain superfamily JHS88_07875 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD JHS88_07875 IPR011716 Tetratricopeptide TPR-3 JHS88_07875 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup JHS88_07875 IPR013026 Tetratricopeptide repeat-containing domain JHS88_07880 IPR005413 Low calcium response V antigen JHS88_07880 IPR036139 Virulence-associated V antigen superfamily JHS88_07885 IPR009863 Type III secretion protein, LcrG JHS88_07890 IPR022797 Type III secretion system regulator LcrR/Chaperone CesD2 JHS88_07890 IPR013405 Type III secretion system regulator, LcrR JHS88_07895 IPR042193 FHIPEP, domain 3 JHS88_07895 IPR006302 Type III secretion protein HrcV JHS88_07895 IPR001712 Type III secretion system FHIPEP JHS88_07895 IPR025505 FHIPEP conserved site JHS88_07895 IPR042196 FHIPEP, domain 4 JHS88_07895 IPR042194 FHIPEP, domain 1 JHS88_07915 IPR013351 Type III secretion system effector delivery regulator TyeA-related JHS88_07915 IPR038347 TyeA superfamily JHS88_07915 IPR015144 Type III secretion system effector delivery regulator TyeA JHS88_07920 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC JHS88_07920 IPR010812 Hypersensitivity response secretion-like, HrpJ JHS88_07925 IPR040627 T3SS EscN ATPase, C-terminal JHS88_07925 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_07925 IPR013380 ATPase, type III secretion system, H+-transporting JHS88_07925 IPR005714 ATPase, type III secretion system, FliI/YscN JHS88_07925 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain JHS88_07925 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain JHS88_07925 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site JHS88_07925 IPR003593 AAA+ ATPase domain JHS88_07940 IPR036429 SpoA-like superfamily JHS88_07940 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO JHS88_07940 IPR003283 Type III secretion system outer membrane, SpaO JHS88_07940 IPR001543 Surface presentation of antigen (SpoA) JHS88_07945 IPR005838 Type III secretion system inner membrane P protein JHS88_07945 IPR005773 Yop virulence translocation protein R JHS88_07950 IPR002191 Bacterial export protein family 3 JHS88_07950 IPR006306 Type III secretion protein HrpO JHS88_07955 IPR002010 Type III secretion system inner membrane R protein JHS88_07955 IPR006304 Type III secretion protein SpaR/YscT JHS88_07960 IPR006307 Type III exporter system, secretion apparatus protein BsaZ JHS88_07960 IPR029025 Type III secretion system substrate exporter, C-terminal JHS88_07960 IPR006135 Type III secretion system substrate exporter JHS88_07965 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JHS88_07965 IPR001647 DNA-binding HTH domain, TetR-type JHS88_07965 IPR013571 Transcription regulator QacR, C-terminal JHS88_07965 IPR023772 DNA-binding HTH domain, TetR-type, conserved site JHS88_07965 IPR009057 Homeobox-like domain superfamily JHS88_07980 IPR025668 Transposase DDE domain JHS88_08010 IPR036597 Fido-like domain superfamily JHS88_08010 IPR003812 Fido domain JHS88_08020 IPR012842 Type III secretion system HrpE/YscL JHS88_08020 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE JHS88_08030 IPR006182 Secretory protein YscJ/FliF JHS88_08030 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ JHS88_08035 IPR012670 Type III secretion system, YscI/HrpB JHS88_08045 IPR011990 Tetratricopeptide-like helical domain superfamily JHS88_08045 IPR013348 Type III secretion system YscG JHS88_08050 IPR021123 Type III secretion, needle-protein-like JHS88_08050 IPR037203 Type III secretion, needle-protein-like superfamily JHS88_08050 IPR011841 Type III secretion system, needle protein JHS88_08060 IPR032030 YscD, cytoplasmic domain JHS88_08060 IPR000253 Forkhead-associated (FHA) domain JHS88_08060 IPR008984 SMAD/FHA domain superfamily JHS88_08060 IPR012843 Type III secretion system YscD/HrpQ JHS88_08060 IPR032034 Yop protein translocation protein D, periplasmic domain JHS88_08065 IPR003522 Type III secretion system outer membrane pore YscC/HrcC JHS88_08065 IPR004845 Type II secretion system GspD, conserved site JHS88_08065 IPR005644 NolW-like JHS88_08065 IPR038591 NolW-like superfamily JHS88_08065 IPR004846 Type II/III secretion system JHS88_08080 IPR009057 Homeobox-like domain superfamily JHS88_08080 IPR020449 Transcription regulator HTH, AraC- type JHS88_08080 IPR014710 RmlC-like jelly roll fold JHS88_08080 IPR018062 HTH domain AraC-type, conserved site JHS88_08080 IPR018060 DNA binding HTH domain, AraC-type JHS88_08100 IPR016162 Aldehyde dehydrogenase, N-terminal JHS88_08100 IPR029510 Aldehyde dehydrogenase, glutamic acid active site JHS88_08100 IPR016160 Aldehyde dehydrogenase, cysteine active site JHS88_08100 IPR016163 Aldehyde dehydrogenase, C-terminal JHS88_08100 IPR016161 Aldehyde/histidinol dehydrogenase JHS88_08100 IPR015590 Aldehyde dehydrogenase domain JHS88_08105 IPR025944 Sigma-54 interaction domain, conserved site JHS88_08105 IPR029016 GAF-like domain superfamily JHS88_08105 IPR009057 Homeobox-like domain superfamily JHS88_08105 IPR002197 DNA binding HTH domain, Fis-type JHS88_08105 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_08105 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 JHS88_08105 IPR002078 RNA polymerase sigma factor 54 interaction domain JHS88_08105 IPR003593 AAA+ ATPase domain JHS88_08105 IPR003018 GAF domain JHS88_08105 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JHS88_08130 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily JHS88_08130 IPR013328 6-phosphogluconate dehydrogenase, domain 2 JHS88_08130 IPR006183 6-phosphogluconate dehydrogenase JHS88_08130 IPR036291 NAD(P)-binding domain superfamily JHS88_08130 IPR006184 6-phosphogluconate-binding site JHS88_08130 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding JHS88_08130 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating JHS88_08130 IPR006114 6-phosphogluconate dehydrogenase, C-terminal JHS88_08135 IPR037171 NagB/RpiA transferase-like JHS88_08135 IPR039104 6-Phosphogluconolactonase JHS88_08135 IPR005900 6-phosphogluconolactonase, DevB-type JHS88_08135 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase JHS88_08140 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal JHS88_08140 IPR036291 NAD(P)-binding domain superfamily JHS88_08140 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding JHS88_08140 IPR019796 Glucose-6-phosphate dehydrogenase, active site JHS88_08140 IPR001282 Glucose-6-phosphate dehydrogenase JHS88_08145 IPR001789 Signal transduction response regulator, receiver domain JHS88_08145 IPR024187 Signal transduction response regulator, citrate/malate metabolism JHS88_08145 IPR011006 CheY-like superfamily JHS88_08145 IPR028141 Transcriptional regulator JHS88_08150 IPR039506 SpoOB, alpha-helical domain JHS88_08150 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_08150 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JHS88_08150 IPR000014 PAS domain JHS88_08150 IPR005467 Histidine kinase domain JHS88_08150 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_08150 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB JHS88_08150 IPR033463 Single cache domain 3 JHS88_08150 IPR029151 Periplasmic sensor-like domain superfamily JHS88_08150 IPR035965 PAS domain superfamily JHS88_08150 IPR013767 PAS fold JHS88_08165 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain JHS88_08180 IPR004852 Di-haem cytochrome c peroxidase JHS88_08180 IPR036909 Cytochrome c-like domain superfamily JHS88_08180 IPR009056 Cytochrome c-like domain JHS88_08180 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase JHS88_08185 IPR036393 Acetylglutamate kinase-like superfamily JHS88_08185 IPR027795 CASTOR, ACT domain JHS88_08185 IPR001048 Aspartate/glutamate/uridylate kinase JHS88_08190 IPR010462 Ectoine synthase JHS88_08190 IPR014710 RmlC-like jelly roll fold JHS88_08190 IPR011051 RmlC-like cupin domain superfamily JHS88_08195 IPR005814 Aminotransferase class-III JHS88_08195 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JHS88_08195 IPR004637 2,4-diaminobutyrate 4-transaminase JHS88_08195 IPR012773 Ectoine biosynthetic protein JHS88_08195 IPR015424 Pyridoxal phosphate-dependent transferase JHS88_08195 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JHS88_08200 IPR016181 Acyl-CoA N-acyltransferase JHS88_08200 IPR012772 L-2,4-diaminobutyric acid acetyltransferase JHS88_08200 IPR000182 GNAT domain JHS88_08205 IPR000060 BCCT transporter family JHS88_08220 IPR000644 CBS domain JHS88_08220 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_08220 IPR005892 Glycine betaine transport ATP-binding subunit JHS88_08220 IPR017871 ABC transporter, conserved site JHS88_08220 IPR003439 ABC transporter-like JHS88_08220 IPR003593 AAA+ ATPase domain JHS88_08225 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JHS88_08225 IPR035906 MetI-like superfamily JHS88_08230 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain JHS88_08240 IPR020845 AMP-binding, conserved site JHS88_08240 IPR000873 AMP-dependent synthetase/ligase JHS88_08240 IPR042099 AMP-dependent synthetase-like superfamily JHS88_08250 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase JHS88_08250 IPR036291 NAD(P)-binding domain superfamily JHS88_08250 IPR020904 Short-chain dehydrogenase/reductase, conserved site JHS88_08250 IPR002347 Short-chain dehydrogenase/reductase SDR JHS88_08260 IPR039420 Transcriptional regulatory protein WalR-like JHS88_08260 IPR011006 CheY-like superfamily JHS88_08260 IPR001789 Signal transduction response regulator, receiver domain JHS88_08260 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_08260 IPR001867 OmpR/PhoB-type DNA-binding domain JHS88_08265 IPR013727 Two-component sensor kinase, N-terminal JHS88_08265 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_08265 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_08265 IPR005467 Histidine kinase domain JHS88_08265 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JHS88_08265 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JHS88_08265 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JHS88_08270 IPR017850 Alkaline-phosphatase-like, core domain superfamily JHS88_08270 IPR012160 Lipoteichoic acid synthase-like JHS88_08270 IPR000917 Sulfatase, N-terminal JHS88_08295 IPR001463 Sodium:alanine symporter JHS88_08305 IPR001123 Amino acid exporter protein, LeuE-type JHS88_08310 IPR001333 Peptidase M32, carboxypeptidase Taq JHS88_08315 IPR004960 Bacterial lipid A biosynthesis acyltransferase JHS88_08315 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase JHS88_08320 IPR002293 Amino acid/polyamine transporter I JHS88_08330 IPR029062 Class I glutamine amidotransferase-like JHS88_08330 IPR005697 Homoserine O-succinyltransferase MetA JHS88_08330 IPR033752 MetA family JHS88_08335 IPR013360 Pilus biogenesis/stability type IV, PilW JHS88_08335 IPR019734 Tetratricopeptide repeat JHS88_08335 IPR011990 Tetratricopeptide-like helical domain superfamily JHS88_08335 IPR013026 Tetratricopeptide repeat-containing domain JHS88_08345 IPR001633 EAL domain JHS88_08345 IPR035919 EAL domain superfamily JHS88_08345 IPR000160 GGDEF domain JHS88_08345 IPR005330 MHYT domain JHS88_08345 IPR029787 Nucleotide cyclase JHS88_08350 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_08350 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_08350 IPR001789 Signal transduction response regulator, receiver domain JHS88_08350 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain JHS88_08350 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JHS88_08350 IPR036641 HPT domain superfamily JHS88_08350 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JHS88_08350 IPR011006 CheY-like superfamily JHS88_08350 IPR005467 Histidine kinase domain JHS88_08350 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JHS88_08350 IPR019247 Histidine kinase BarA, N-terminal JHS88_08350 IPR003660 HAMP domain JHS88_08365 IPR011004 Trimeric LpxA-like superfamily JHS88_08365 IPR024688 Maltose/galactoside acetyltransferase JHS88_08365 IPR039369 Galactoside O-acetyltransferase LacA-like JHS88_08365 IPR018357 Hexapeptide transferase, conserved site JHS88_08365 IPR001451 Hexapeptide repeat JHS88_08375 IPR033469 CYTH-like domain superfamily JHS88_08375 IPR023577 CYTH domain JHS88_08375 IPR008173 Adenylyl cyclase CyaB JHS88_08385 IPR007351 Uncharacterised protein YjbR JHS88_08385 IPR038056 YjbR-like superfamily JHS88_08390 IPR023187 Transcriptional regulator MarR-type, conserved site JHS88_08390 IPR036390 Winged helix DNA-binding domain superfamily JHS88_08390 IPR000835 MarR-type HTH domain JHS88_08390 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_08400 IPR009057 Homeobox-like domain superfamily JHS88_08400 IPR018060 DNA binding HTH domain, AraC-type JHS88_08400 IPR018062 HTH domain AraC-type, conserved site JHS88_08400 IPR020449 Transcription regulator HTH, AraC- type JHS88_08405 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily JHS88_08405 IPR012947 Threonyl/alanyl tRNA synthetase, SAD JHS88_08405 IPR009000 Translation protein, beta-barrel domain superfamily JHS88_08405 IPR003156 DHHA1 domain JHS88_08405 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal JHS88_08405 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain JHS88_08405 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily JHS88_08405 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria JHS88_08405 IPR002318 Alanine-tRNA ligase, class IIc JHS88_08415 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_08415 IPR000792 Transcription regulator LuxR, C-terminal JHS88_08415 IPR035919 EAL domain superfamily JHS88_08415 IPR016032 Signal transduction response regulator, C-terminal effector JHS88_08415 IPR001633 EAL domain JHS88_08420 IPR001667 DDH domain JHS88_08420 IPR038763 DHH phosphoesterase superfamily JHS88_08420 IPR004097 DHHA2 domain JHS88_08420 IPR038222 DHHA2 domain superfamily JHS88_08420 IPR022934 Manganese-dependent inorganic pyrophosphatase, probable JHS88_08425 IPR004632 4-aminobutyrate aminotransferase, bacterial JHS88_08425 IPR005814 Aminotransferase class-III JHS88_08425 IPR015424 Pyridoxal phosphate-dependent transferase JHS88_08425 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JHS88_08425 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JHS88_08430 IPR015590 Aldehyde dehydrogenase domain JHS88_08430 IPR016162 Aldehyde dehydrogenase, N-terminal JHS88_08430 IPR010102 Succinate semialdehyde dehydrogenase JHS88_08430 IPR016163 Aldehyde dehydrogenase, C-terminal JHS88_08430 IPR029510 Aldehyde dehydrogenase, glutamic acid active site JHS88_08430 IPR016160 Aldehyde dehydrogenase, cysteine active site JHS88_08430 IPR016161 Aldehyde/histidinol dehydrogenase JHS88_08435 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type JHS88_08435 IPR017754 Agmatine deiminase JHS88_08440 IPR003010 Carbon-nitrogen hydrolase JHS88_08440 IPR036526 Carbon-nitrogen hydrolase superfamily JHS88_08445 IPR006076 FAD dependent oxidoreductase JHS88_08445 IPR036188 FAD/NAD(P)-binding domain superfamily JHS88_08450 IPR016161 Aldehyde/histidinol dehydrogenase JHS88_08450 IPR016163 Aldehyde dehydrogenase, C-terminal JHS88_08450 IPR016160 Aldehyde dehydrogenase, cysteine active site JHS88_08450 IPR029510 Aldehyde dehydrogenase, glutamic acid active site JHS88_08450 IPR016162 Aldehyde dehydrogenase, N-terminal JHS88_08450 IPR015590 Aldehyde dehydrogenase domain JHS88_08455 IPR011051 RmlC-like cupin domain superfamily JHS88_08455 IPR001387 Cro/C1-type helix-turn-helix domain JHS88_08455 IPR014710 RmlC-like jelly roll fold JHS88_08455 IPR010982 Lambda repressor-like, DNA-binding domain superfamily JHS88_08455 IPR013096 Cupin 2, conserved barrel JHS88_08460 IPR011697 Peptidase C26 JHS88_08460 IPR017926 Glutamine amidotransferase JHS88_08460 IPR029062 Class I glutamine amidotransferase-like JHS88_08465 IPR027303 Glutamine synthetase, glycine-rich site JHS88_08465 IPR008146 Glutamine synthetase, catalytic domain JHS88_08465 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain JHS88_08465 IPR036651 Glutamine synthetase, N-terminal domain superfamily JHS88_08470 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal JHS88_08525 IPR036397 Ribonuclease H superfamily JHS88_08525 IPR025948 HTH-like domain JHS88_08525 IPR001584 Integrase, catalytic core JHS88_08525 IPR012337 Ribonuclease H-like superfamily JHS88_08535 IPR009614 Toxin YoeB JHS88_08535 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily JHS88_08540 IPR036165 YefM-like superfamily JHS88_08540 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM JHS88_08650 IPR025217 Domain of unknown function DUF3944 JHS88_08650 IPR021150 Ubiquinol-cytochrome c chaperone/UPF0174 JHS88_08660 IPR000468 Barstar (barnase inhibitor) JHS88_08660 IPR035905 Barstar-like superfamily JHS88_08695 IPR016291 Isochorismatase JHS88_08695 IPR000868 Isochorismatase-like JHS88_08695 IPR036380 Isochorismatase-like superfamily JHS88_08760 IPR036670 SecA, preprotein cross-linking domain superfamily JHS88_08760 IPR036266 SecA, Wing/Scaffold superfamily JHS88_08760 IPR011116 SecA Wing/Scaffold JHS88_08760 IPR011130 SecA, preprotein cross-linking domain JHS88_08760 IPR014018 SecA motor DEAD JHS88_08760 IPR011115 SecA DEAD-like, N-terminal JHS88_08760 IPR020937 SecA conserved site JHS88_08760 IPR000185 Protein translocase subunit SecA JHS88_08760 IPR004027 SEC-C motif JHS88_08760 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_08815 IPR025668 Transposase DDE domain JHS88_08860 IPR002104 Integrase, catalytic domain JHS88_08860 IPR011010 DNA breaking-rejoining enzyme, catalytic core JHS88_08860 IPR013762 Integrase-like, catalytic domain superfamily JHS88_08860 IPR010998 Integrase/recombinase, N-terminal JHS88_08955 IPR007553 Domain of unknown function DUF523 JHS88_09005 IPR004218 Prokaryotic glutathione synthetase, ATP-binding JHS88_09005 IPR006284 Glutathione synthetase, prokaryotic JHS88_09005 IPR011761 ATP-grasp fold JHS88_09005 IPR016185 Pre-ATP-grasp domain superfamily JHS88_09005 IPR013815 ATP-grasp fold, subdomain 1 JHS88_09005 IPR004215 Prokaryotic glutathione synthetase, N-terminal JHS88_09025 IPR003615 HNH nuclease JHS88_09025 IPR002711 HNH endonuclease JHS88_09080 IPR025668 Transposase DDE domain JHS88_09195 IPR000182 GNAT domain JHS88_09195 IPR016181 Acyl-CoA N-acyltransferase JHS88_09225 IPR004107 Integrase, SAM-like, N-terminal JHS88_09225 IPR002104 Integrase, catalytic domain JHS88_09225 IPR013762 Integrase-like, catalytic domain superfamily JHS88_09225 IPR011010 DNA breaking-rejoining enzyme, catalytic core JHS88_09225 IPR010998 Integrase/recombinase, N-terminal JHS88_09225 IPR011946 Integrase, integron-type JHS88_09240 IPR000182 GNAT domain JHS88_09240 IPR016181 Acyl-CoA N-acyltransferase JHS88_09245 IPR000014 PAS domain JHS88_09245 IPR030828 TyrR family, helix-turn-helix domain JHS88_09245 IPR035965 PAS domain superfamily JHS88_09245 IPR002078 RNA polymerase sigma factor 54 interaction domain JHS88_09245 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 JHS88_09245 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JHS88_09245 IPR025944 Sigma-54 interaction domain, conserved site JHS88_09245 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_09245 IPR009057 Homeobox-like domain superfamily JHS88_09245 IPR002912 ACT domain JHS88_09245 IPR003593 AAA+ ATPase domain JHS88_09250 IPR021147 Protein of unknown function DUF697 JHS88_09250 IPR006507 Uncharacterised protein family UPF0283 JHS88_09255 IPR007413 Protein of unknown function DUF463, YcjX-like protein JHS88_09270 IPR019999 Anthranilate synthase component I-like JHS88_09270 IPR015890 Chorismate-utilising enzyme, C-terminal JHS88_09270 IPR006805 Anthranilate synthase component I, N-terminal JHS88_09270 IPR005802 Aminodeoxychorismate synthase, component I JHS88_09270 IPR005801 ADC synthase JHS88_09275 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JHS88_09275 IPR001789 Signal transduction response regulator, receiver domain JHS88_09275 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JHS88_09275 IPR029151 Periplasmic sensor-like domain superfamily JHS88_09275 IPR011006 CheY-like superfamily JHS88_09275 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JHS88_09275 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_09275 IPR005467 Histidine kinase domain JHS88_09275 IPR035965 PAS domain superfamily JHS88_09275 IPR015387 LuxQ, periplasmic JHS88_09275 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_09285 IPR015797 NUDIX hydrolase-like domain superfamily JHS88_09285 IPR000086 NUDIX hydrolase domain JHS88_09285 IPR000059 NUDIX hydrolase, NudL, conserved site JHS88_09285 IPR023735 Uncharacterised nudix hydrolase NudL JHS88_09290 IPR018227 Amino acid/polyamine transporter 2 JHS88_09290 IPR004694 Hydroxy amino acid transporter JHS88_09295 IPR005130 Serine dehydratase-like, alpha subunit JHS88_09295 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form JHS88_09295 IPR005131 Serine dehydratase beta chain JHS88_09295 IPR029009 Allosteric substrate binding domain superfamily JHS88_09300 IPR036046 Acylphosphatase-like domain superfamily JHS88_09300 IPR007024 BLUF domain JHS88_09300 IPR001633 EAL domain JHS88_09300 IPR035919 EAL domain superfamily JHS88_09310 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family JHS88_09310 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily JHS88_09315 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JHS88_09315 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain JHS88_09315 IPR003660 HAMP domain JHS88_09315 IPR004090 Chemotaxis methyl-accepting receptor JHS88_09315 IPR000727 Target SNARE coiled-coil homology domain JHS88_09320 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb JHS88_09320 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) JHS88_09320 IPR006195 Aminoacyl-tRNA synthetase, class II JHS88_09320 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type JHS88_09320 IPR004522 Asparagine-tRNA ligase JHS88_09320 IPR012340 Nucleic acid-binding, OB-fold JHS88_09330 IPR000524 Transcription regulator HTH, GntR JHS88_09330 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JHS88_09330 IPR015424 Pyridoxal phosphate-dependent transferase JHS88_09330 IPR004839 Aminotransferase, class I/classII JHS88_09330 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JHS88_09330 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_09330 IPR036390 Winged helix DNA-binding domain superfamily JHS88_09345 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site JHS88_09345 IPR000796 Aspartate/other aminotransferase JHS88_09345 IPR015424 Pyridoxal phosphate-dependent transferase JHS88_09345 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JHS88_09345 IPR004839 Aminotransferase, class I/classII JHS88_09345 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JHS88_09365 IPR003660 HAMP domain JHS88_09365 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JHS88_09370 IPR000060 BCCT transporter family JHS88_09370 IPR018093 BCCT transporter, conserved site JHS88_09375 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_09375 IPR036390 Winged helix DNA-binding domain superfamily JHS88_09375 IPR000835 MarR-type HTH domain JHS88_09380 IPR011006 CheY-like superfamily JHS88_09380 IPR016032 Signal transduction response regulator, C-terminal effector JHS88_09380 IPR001789 Signal transduction response regulator, receiver domain JHS88_09380 IPR000792 Transcription regulator LuxR, C-terminal JHS88_09385 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain JHS88_09385 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_09385 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_09385 IPR033480 Single Cache domain 2 JHS88_09385 IPR017171 Signal transduction histidine kinase, MctS JHS88_09390 IPR004681 TRAP transporter large membrane protein DctM JHS88_09390 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit JHS88_09400 IPR026289 Solute binding protein, TakP-like JHS88_09400 IPR041722 Alpha-keto acid binding periplasmic protein JHS88_09400 IPR018389 TRAP transporter solute receptor DctP/TeaA JHS88_09400 IPR038404 TRAP transporter solute receptor DctP superfamily JHS88_09415 IPR001279 Metallo-beta-lactamase JHS88_09415 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JHS88_09420 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily JHS88_09420 IPR006311 Twin-arginine translocation pathway, signal sequence JHS88_09420 IPR010275 Protein of unknown function DUF882 JHS88_09425 IPR005490 L,D-transpeptidase catalytic domain JHS88_09425 IPR002477 Peptidoglycan binding-like JHS88_09425 IPR036365 PGBD-like superfamily JHS88_09425 IPR038063 L,D-transpeptidase catalytic domain-like JHS88_09450 IPR000926 GTP cyclohydrolase II, RibA JHS88_09450 IPR032677 GTP cyclohydrolase II JHS88_09450 IPR036144 RibA-like superfamily JHS88_09460 IPR013026 Tetratricopeptide repeat-containing domain JHS88_09460 IPR005616 CcmH/CycL/Ccl2/NrfF family JHS88_09460 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily JHS88_09460 IPR017565 Formate-dependent nitrite reductase complex, subunit NrfF JHS88_09460 IPR011990 Tetratricopeptide-like helical domain superfamily JHS88_09460 IPR019734 Tetratricopeptide repeat JHS88_09465 IPR013766 Thioredoxin domain JHS88_09465 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE JHS88_09465 IPR013740 Redoxin JHS88_09465 IPR036249 Thioredoxin-like superfamily JHS88_09465 IPR017937 Thioredoxin, conserved site JHS88_09470 IPR003568 Cytochrome c-type biogenesis protein CcmF JHS88_09470 IPR003567 Cytochrome c-type biogenesis protein JHS88_09470 IPR002541 Cytochrome c assembly protein JHS88_09470 IPR003570 Cytochrome c-type biogenesis protein NrfE JHS88_09470 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal JHS88_09470 IPR017563 Cytochrome c nitrate reductase biogenesis protein NrfE JHS88_09475 IPR005614 NrfD family JHS88_09475 IPR017566 NrfD JHS88_09480 IPR006311 Twin-arginine translocation pathway, signal sequence JHS88_09480 IPR017567 Cytochrome c nitrite reductase, Fe-S protein JHS88_09480 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JHS88_09480 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JHS88_09490 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit JHS88_09490 IPR003321 Cytochrome c552 JHS88_09490 IPR036280 Multiheme cytochrome superfamily JHS88_09490 IPR011031 Multihaem cytochrome JHS88_09505 IPR005743 DNA gyrase, subunit A JHS88_09505 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily JHS88_09505 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta JHS88_09505 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal JHS88_09505 IPR013760 DNA topoisomerase, type IIA-like domain superfamily JHS88_09505 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal JHS88_09505 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat JHS88_09510 IPR010233 Ubiquinone biosynthesis O-methyltransferase JHS88_09510 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_09515 IPR000788 Ribonucleotide reductase large subunit, C-terminal JHS88_09515 IPR013346 Ribonucleotide reductase, class I , alpha subunit JHS88_09515 IPR005144 ATP-cone domain JHS88_09515 IPR013509 Ribonucleotide reductase large subunit, N-terminal JHS88_09515 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal JHS88_09515 IPR039718 Ribonucleoside-diphosphate reductase large subunit JHS88_09520 IPR009078 Ferritin-like superfamily JHS88_09520 IPR033909 Ribonucleotide reductase small subunit JHS88_09520 IPR012348 Ribonucleotide reductase-like JHS88_09520 IPR030475 Ribonucleotide reductase small subunit, acitve site JHS88_09520 IPR000358 Ribonucleotide reductase small subunit family JHS88_09530 IPR036653 CinA-like, C-terminal JHS88_09530 IPR008135 Competence-induced protein CinA JHS88_09530 IPR036425 MoaB/Mog-like domain superfamily JHS88_09530 IPR001453 MoaB/Mog domain JHS88_09545 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal JHS88_09545 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal JHS88_09545 IPR005730 Carboxynorspermidine decarboxylase JHS88_09545 IPR029066 PLP-binding barrel JHS88_09550 IPR036291 NAD(P)-binding domain superfamily JHS88_09550 IPR032095 Saccharopine dehydrogenase, C-terminal JHS88_09550 IPR005097 Saccharopine dehydrogenase, NADP binding domain JHS88_09555 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JHS88_09555 IPR005814 Aminotransferase class-III JHS88_09555 IPR004637 2,4-diaminobutyrate 4-transaminase JHS88_09555 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JHS88_09555 IPR015424 Pyridoxal phosphate-dependent transferase JHS88_09580 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase JHS88_09580 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial JHS88_09580 IPR000462 CDP-alcohol phosphatidyltransferase JHS88_09585 IPR038476 UvrC homology region 2 superfamily JHS88_09585 IPR001162 UvrC family homology region JHS88_09585 IPR004791 UvrABC system, subunit C JHS88_09585 IPR036876 UVR domain superfamily JHS88_09585 IPR001943 UVR domain JHS88_09585 IPR010994 RuvA domain 2-like JHS88_09585 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 JHS88_09585 IPR000305 GIY-YIG endonuclease JHS88_09585 IPR035901 GIY-YIG endonuclease superfamily JHS88_09590 IPR011006 CheY-like superfamily JHS88_09590 IPR016032 Signal transduction response regulator, C-terminal effector JHS88_09590 IPR001789 Signal transduction response regulator, receiver domain JHS88_09590 IPR000792 Transcription regulator LuxR, C-terminal JHS88_09595 IPR036397 Ribonuclease H superfamily JHS88_09595 IPR006172 DNA-directed DNA polymerase, family B JHS88_09595 IPR017964 DNA-directed DNA polymerase, family B, conserved site JHS88_09595 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain JHS88_09595 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain JHS88_09595 IPR042087 DNA polymerase family B, C-terminal domain JHS88_09595 IPR023211 DNA polymerase, palm domain superfamily JHS88_09595 IPR012337 Ribonuclease H-like superfamily JHS88_09605 IPR015365 Elongation factor P, C-terminal JHS88_09605 IPR012340 Nucleic acid-binding, OB-fold JHS88_09605 IPR014722 Ribosomal protein L2, domain 2 JHS88_09605 IPR013185 Translation elongation factor, KOW-like JHS88_09605 IPR008991 Translation protein SH3-like domain superfamily JHS88_09605 IPR013852 Translation elongation factor P/YeiP, conserved site JHS88_09605 IPR001059 Translation elongation factor P/YeiP, central JHS88_09605 IPR011897 Translation elongation factor P-like, YeiP JHS88_09605 IPR020599 Translation elongation factor P/YeiP JHS88_09610 IPR007376 dsDNA mimic, putative JHS88_09610 IPR036763 Putative dsDNA mimic superfamily JHS88_09615 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain JHS88_09615 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site JHS88_09615 IPR036986 RNA-binding S4 domain superfamily JHS88_09615 IPR006145 Pseudouridine synthase, RsuA/RluA JHS88_09615 IPR020103 Pseudouridine synthase, catalytic domain superfamily JHS88_09615 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F JHS88_09615 IPR002942 RNA-binding S4 domain JHS88_09625 IPR006070 YrdC-like domain JHS88_09625 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily JHS88_09630 IPR016195 Polymerase/histidinol phosphatase-like JHS88_09630 IPR003141 Polymerase/histidinol phosphatase, N-terminal JHS88_09630 IPR004013 PHP domain JHS88_09635 IPR012639 Tryptophan operon leader peptide JHS88_09640 IPR015890 Chorismate-utilising enzyme, C-terminal JHS88_09640 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial JHS88_09640 IPR006805 Anthranilate synthase component I, N-terminal JHS88_09640 IPR019999 Anthranilate synthase component I-like JHS88_09640 IPR005801 ADC synthase JHS88_09645 IPR029062 Class I glutamine amidotransferase-like JHS88_09645 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain JHS88_09645 IPR017926 Glutamine amidotransferase JHS88_09650 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily JHS88_09650 IPR000312 Glycosyl transferase, family 3 JHS88_09650 IPR017459 Glycosyl transferase family 3, N-terminal domain JHS88_09650 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily JHS88_09650 IPR005940 Anthranilate phosphoribosyl transferase JHS88_09655 IPR013785 Aldolase-type TIM barrel JHS88_09655 IPR013798 Indole-3-glycerol phosphate synthase JHS88_09655 IPR001468 Indole-3-glycerol phosphate synthase, conserved site JHS88_09655 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) JHS88_09655 IPR011060 Ribulose-phosphate binding barrel JHS88_09660 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme JHS88_09660 IPR001926 Pyridoxal-phosphate dependent enzyme JHS88_09660 IPR006653 Tryptophan synthase, beta chain, conserved site JHS88_09660 IPR006654 Tryptophan synthase, beta chain JHS88_09660 IPR023026 Tryptophan synthase beta chain/beta chain-like JHS88_09665 IPR013785 Aldolase-type TIM barrel JHS88_09665 IPR011060 Ribulose-phosphate binding barrel JHS88_09665 IPR018204 Tryptophan synthase, alpha chain, active site JHS88_09665 IPR002028 Tryptophan synthase, alpha chain JHS88_09670 IPR000595 Cyclic nucleotide-binding domain JHS88_09670 IPR018490 Cyclic nucleotide-binding-like JHS88_09670 IPR036390 Winged helix DNA-binding domain superfamily JHS88_09670 IPR018488 Cyclic nucleotide-binding, conserved site JHS88_09670 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_09670 IPR018335 Transcription regulator HTH, Crp-type, conserved site JHS88_09670 IPR014710 RmlC-like jelly roll fold JHS88_09670 IPR012318 Crp-type HTH domain JHS88_09675 IPR025110 AMP-binding enzyme, C-terminal domain JHS88_09675 IPR020459 AMP-binding JHS88_09675 IPR042099 AMP-dependent synthetase-like superfamily JHS88_09675 IPR000873 AMP-dependent synthetase/ligase JHS88_09675 IPR020845 AMP-binding, conserved site JHS88_09680 IPR036458 Sodium:dicarboxylate symporter superfamily JHS88_09680 IPR018107 Sodium:dicarboxylate symporter, conserved site JHS88_09680 IPR001991 Sodium:dicarboxylate symporter JHS88_09680 IPR023954 C4-dicarboxylate transport protein JHS88_09685 IPR035304 Acyl homoserine lactone synthase JHS88_09690 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JHS88_09690 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JHS88_09690 IPR001789 Signal transduction response regulator, receiver domain JHS88_09690 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_09690 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JHS88_09690 IPR011006 CheY-like superfamily JHS88_09690 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_09690 IPR005467 Histidine kinase domain JHS88_09700 IPR006008 Intracellular septation protein A JHS88_09705 IPR006683 Thioesterase domain JHS88_09705 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase JHS88_09705 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain JHS88_09705 IPR029069 HotDog domain superfamily JHS88_09710 IPR005545 YCII-related JHS88_09710 IPR011008 Dimeric alpha-beta barrel JHS88_09720 IPR038071 UROD/MetE-like superfamily JHS88_09720 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal JHS88_09720 IPR006276 Cobalamin-independent methionine synthase JHS88_09720 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal JHS88_09725 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain JHS88_09725 IPR005119 LysR, substrate-binding JHS88_09725 IPR036390 Winged helix DNA-binding domain superfamily JHS88_09725 IPR000847 Transcription regulator HTH, LysR JHS88_09725 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_09740 IPR000160 GGDEF domain JHS88_09740 IPR001633 EAL domain JHS88_09740 IPR029016 GAF-like domain superfamily JHS88_09740 IPR001294 Phytochrome JHS88_09740 IPR016132 Phytochrome chromophore attachment domain JHS88_09740 IPR029787 Nucleotide cyclase JHS88_09740 IPR035919 EAL domain superfamily JHS88_09740 IPR013515 Phytochrome, central region JHS88_09740 IPR003018 GAF domain JHS88_09745 IPR013704 Uncharacterised protein family UPF0313, N-terminal JHS88_09745 IPR024560 Uncharacterised protein family UPF0313, C-terminal JHS88_09745 IPR022946 Uncharacterised protein family UPF0313 JHS88_09745 IPR023404 Radical SAM, alpha/beta horseshoe JHS88_09745 IPR007197 Radical SAM JHS88_09745 IPR020612 Methylthiotransferase, conserved site JHS88_09745 IPR006638 Elp3/MiaB/NifB JHS88_09750 IPR003660 HAMP domain JHS88_09750 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JHS88_09755 IPR011006 CheY-like superfamily JHS88_09755 IPR001867 OmpR/PhoB-type DNA-binding domain JHS88_09755 IPR001789 Signal transduction response regulator, receiver domain JHS88_09755 IPR039420 Transcriptional regulatory protein WalR-like JHS88_09755 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_09760 IPR003660 HAMP domain JHS88_09760 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_09760 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_09760 IPR005467 Histidine kinase domain JHS88_09760 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JHS88_09760 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JHS88_09760 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JHS88_09780 IPR036390 Winged helix DNA-binding domain superfamily JHS88_09780 IPR005119 LysR, substrate-binding JHS88_09780 IPR000847 Transcription regulator HTH, LysR JHS88_09780 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_09785 IPR005694 Efflux pump membrane protein JHS88_09785 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain JHS88_09785 IPR030196 Multidrug resistance protein MdtN JHS88_09795 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal JHS88_09795 IPR006276 Cobalamin-independent methionine synthase JHS88_09795 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal JHS88_09795 IPR038071 UROD/MetE-like superfamily JHS88_09805 IPR020449 Transcription regulator HTH, AraC- type JHS88_09805 IPR018062 HTH domain AraC-type, conserved site JHS88_09805 IPR009057 Homeobox-like domain superfamily JHS88_09805 IPR037923 Transcription regulator HTH-like JHS88_09805 IPR003313 AraC-type arabinose-binding/dimerisation domain JHS88_09805 IPR018060 DNA binding HTH domain, AraC-type JHS88_09810 IPR000868 Isochorismatase-like JHS88_09810 IPR036380 Isochorismatase-like superfamily JHS88_09815 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_09815 IPR025857 MacB-like periplasmic core domain JHS88_09815 IPR017911 ABC transporter, macrolide export, ATP-binding domain JHS88_09815 IPR017871 ABC transporter, conserved site JHS88_09815 IPR003439 ABC transporter-like JHS88_09815 IPR003838 ABC transporter permease protein domain JHS88_09815 IPR003593 AAA+ ATPase domain JHS88_09820 IPR003593 AAA+ ATPase domain JHS88_09820 IPR003439 ABC transporter-like JHS88_09820 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_09820 IPR025857 MacB-like periplasmic core domain JHS88_09820 IPR017911 ABC transporter, macrolide export, ATP-binding domain JHS88_09820 IPR003838 ABC transporter permease protein domain JHS88_09820 IPR017871 ABC transporter, conserved site JHS88_09825 IPR003838 ABC transporter permease protein domain JHS88_09825 IPR017871 ABC transporter, conserved site JHS88_09825 IPR017911 ABC transporter, macrolide export, ATP-binding domain JHS88_09825 IPR025857 MacB-like periplasmic core domain JHS88_09825 IPR003439 ABC transporter-like JHS88_09825 IPR003593 AAA+ ATPase domain JHS88_09825 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_09835 IPR006143 RND efflux pump, membrane fusion protein JHS88_09835 IPR030190 Macrolide export protein MacA JHS88_09835 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain JHS88_09855 IPR017937 Thioredoxin, conserved site JHS88_09855 IPR036249 Thioredoxin-like superfamily JHS88_09855 IPR005746 Thioredoxin JHS88_09855 IPR013766 Thioredoxin domain JHS88_09860 IPR003834 Cytochrome C biogenesis protein, transmembrane domain JHS88_09860 IPR035671 DsbD gamma JHS88_09860 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain JHS88_09860 IPR013766 Thioredoxin domain JHS88_09860 IPR017937 Thioredoxin, conserved site JHS88_09860 IPR036249 Thioredoxin-like superfamily JHS88_09860 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily JHS88_09860 IPR022910 Thiol:disulphide interchange protein DsbD JHS88_09870 IPR036390 Winged helix DNA-binding domain superfamily JHS88_09870 IPR005119 LysR, substrate-binding JHS88_09870 IPR000847 Transcription regulator HTH, LysR JHS88_09870 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_09875 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_09875 IPR000792 Transcription regulator LuxR, C-terminal JHS88_09875 IPR001789 Signal transduction response regulator, receiver domain JHS88_09875 IPR011006 CheY-like superfamily JHS88_09880 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_09880 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_09880 IPR005467 Histidine kinase domain JHS88_09880 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JHS88_09880 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JHS88_09880 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JHS88_09885 IPR006311 Twin-arginine translocation pathway, signal sequence JHS88_09885 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JHS88_09885 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JHS88_09890 IPR005614 NrfD family JHS88_09895 IPR041929 Tetrathionate reductase subunit A, N-terminal JHS88_09895 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain JHS88_09895 IPR006656 Molybdopterin oxidoreductase JHS88_09895 IPR006657 Molybdopterin dinucleotide-binding domain JHS88_09895 IPR037946 Tetrathionate reductase subunit A, MopB domain JHS88_09895 IPR009010 Aspartate decarboxylase-like domain superfamily JHS88_09900 IPR036909 Cytochrome c-like domain superfamily JHS88_09900 IPR009056 Cytochrome c-like domain JHS88_09900 IPR024167 Cytochrome c4-like JHS88_09905 IPR009056 Cytochrome c-like domain JHS88_09905 IPR036909 Cytochrome c-like domain superfamily JHS88_09910 IPR007498 Intermembrane transport protein PqiA-like JHS88_09910 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type JHS88_09915 IPR003399 Mce/MlaD JHS88_09925 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase JHS88_09925 IPR003342 Glycosyl transferase family 39/83 JHS88_09935 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase JHS88_09935 IPR001173 Glycosyltransferase 2-like JHS88_09935 IPR029044 Nucleotide-diphospho-sugar transferases JHS88_09940 IPR036291 NAD(P)-binding domain superfamily JHS88_09940 IPR001509 NAD-dependent epimerase/dehydratase JHS88_09950 IPR039424 Solute-binding protein family 5 JHS88_09950 IPR023765 Solute-binding protein family 5, conserved site JHS88_09950 IPR000914 Solute-binding protein family 5 domain JHS88_09950 IPR030678 Peptide/nickel binding protein, MppA-type JHS88_09955 IPR014732 Orotidine 5'-phosphate decarboxylase JHS88_09955 IPR011060 Ribulose-phosphate binding barrel JHS88_09955 IPR001754 Orotidine 5'-phosphate decarboxylase domain JHS88_09955 IPR018089 Orotidine 5'-phosphate decarboxylase, active site JHS88_09955 IPR013785 Aldolase-type TIM barrel JHS88_09960 IPR041166 LapB, rubredoxin metal binding domain JHS88_09960 IPR013026 Tetratricopeptide repeat-containing domain JHS88_09960 IPR011990 Tetratricopeptide-like helical domain superfamily JHS88_09960 IPR019734 Tetratricopeptide repeat JHS88_09960 IPR030865 Lipopolysaccharide assembly protein B JHS88_09965 IPR032906 Lipopolysaccharide assembly protein A JHS88_09965 IPR010445 Lipopolysaccharide assembly protein A domain JHS88_09970 IPR020816 Histone-like DNA-binding protein, conserved site JHS88_09970 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily JHS88_09970 IPR005685 Integration host factor, beta subunit JHS88_09970 IPR000119 Histone-like DNA-binding protein JHS88_09975 IPR012340 Nucleic acid-binding, OB-fold JHS88_09975 IPR000110 Ribosomal protein S1 JHS88_09975 IPR022967 RNA-binding domain, S1 JHS88_09975 IPR003029 S1 domain JHS88_09980 IPR003136 Cytidylate kinase JHS88_09980 IPR011994 Cytidylate kinase domain JHS88_09980 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_09985 IPR029045 ClpP/crotonase-like domain superfamily JHS88_09985 IPR002142 Peptidase S49 JHS88_09985 IPR013703 Peptidase S49, N-terminal proteobacteria JHS88_09990 IPR036291 NAD(P)-binding domain superfamily JHS88_09990 IPR002347 Short-chain dehydrogenase/reductase SDR JHS88_09990 IPR020904 Short-chain dehydrogenase/reductase, conserved site JHS88_10005 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain JHS88_10005 IPR040982 DNA polymerase III alpha subunit finger domain JHS88_10005 IPR004805 DNA polymerase III, alpha subunit JHS88_10005 IPR003141 Polymerase/histidinol phosphatase, N-terminal JHS88_10005 IPR004013 PHP domain JHS88_10005 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type JHS88_10005 IPR029460 DNA polymerase, helix-hairpin-helix motif JHS88_10005 IPR023073 DNA polymerase, error-prone JHS88_10010 IPR024181 Chemotaxis response regulator CheV JHS88_10010 IPR036061 CheW-like domain superfamily JHS88_10010 IPR002545 CheW-like domain JHS88_10010 IPR011006 CheY-like superfamily JHS88_10010 IPR001789 Signal transduction response regulator, receiver domain JHS88_10015 IPR000600 ROK family JHS88_10015 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_10015 IPR036390 Winged helix DNA-binding domain superfamily JHS88_10020 IPR011037 Pyruvate kinase-like, insert domain superfamily JHS88_10020 IPR018209 Pyruvate kinase, active site JHS88_10020 IPR015793 Pyruvate kinase, barrel JHS88_10020 IPR015795 Pyruvate kinase, C-terminal JHS88_10020 IPR036918 Pyruvate kinase, C-terminal domain superfamily JHS88_10020 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily JHS88_10020 IPR015806 Pyruvate kinase, insert domain superfamily JHS88_10020 IPR001697 Pyruvate kinase JHS88_10020 IPR040442 Pyruvate kinase-like domain superfamily JHS88_10025 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase JHS88_10025 IPR037483 YjjU-like JHS88_10025 IPR002641 Patatin-like phospholipase domain JHS88_10040 IPR000175 Sodium:neurotransmitter symporter JHS88_10040 IPR037272 Sodium:neurotransmitter symporter superfamily JHS88_10055 IPR011299 PTS system glucose-specific IIBC component JHS88_10055 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component JHS88_10055 IPR013013 Phosphotransferase system, EIIC component, type 1 JHS88_10055 IPR036878 Glucose permease domain IIB JHS88_10055 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site JHS88_10055 IPR003352 Phosphotransferase system, EIIC JHS88_10055 IPR001996 Phosphotransferase system, IIB component, type 1 JHS88_10060 IPR032466 Metal-dependent hydrolase JHS88_10060 IPR015991 Uncharacterised hydrolase TatD-type JHS88_10060 IPR018228 Deoxyribonuclease, TatD-related, conserved site JHS88_10060 IPR001130 TatD family JHS88_10065 IPR004622 DNA polymerase III, delta prime subunit JHS88_10065 IPR015199 DNA polymerase III, delta subunit, C-terminal JHS88_10065 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_10070 IPR018094 Thymidylate kinase JHS88_10070 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_10070 IPR018095 Thymidylate kinase, conserved site JHS88_10070 IPR039430 Thymidylate kinase-like domain JHS88_10075 IPR003770 Endolytic murein transglycosylase JHS88_10080 IPR017824 Aminodeoxychorismate lyase, class IV JHS88_10080 IPR001544 Aminotransferase class IV JHS88_10080 IPR018300 Aminotransferase, class IV, conserved site JHS88_10080 IPR036038 Aminotransferase-like, PLP-dependent enzymes JHS88_10085 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain JHS88_10085 IPR016039 Thiolase-like JHS88_10085 IPR014030 Beta-ketoacyl synthase, N-terminal JHS88_10085 IPR014031 Beta-ketoacyl synthase, C-terminal JHS88_10085 IPR018201 Beta-ketoacyl synthase, active site JHS88_10085 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 JHS88_10085 IPR000794 Beta-ketoacyl synthase JHS88_10090 IPR003231 Acyl carrier protein (ACP) JHS88_10090 IPR006162 Phosphopantetheine attachment site JHS88_10090 IPR036736 ACP-like superfamily JHS88_10090 IPR009081 Phosphopantetheine binding ACP domain JHS88_10095 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase JHS88_10095 IPR036291 NAD(P)-binding domain superfamily JHS88_10095 IPR020904 Short-chain dehydrogenase/reductase, conserved site JHS88_10095 IPR002347 Short-chain dehydrogenase/reductase SDR JHS88_10100 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding JHS88_10100 IPR001227 Acyl transferase domain superfamily JHS88_10100 IPR014043 Acyl transferase JHS88_10100 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase JHS88_10100 IPR024925 Malonyl CoA-acyl carrier protein transacylase JHS88_10100 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type JHS88_10105 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal JHS88_10105 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 JHS88_10105 IPR016039 Thiolase-like JHS88_10105 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JHS88_10110 IPR003664 Fatty acid synthesis PlsX protein JHS88_10110 IPR012281 Phospholipid biosynthesis protein, PlsX-like JHS88_10115 IPR002677 Ribosomal protein L32p JHS88_10115 IPR011332 Zinc-binding ribosomal protein JHS88_10120 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria JHS88_10120 IPR003772 Large ribosomal RNA subunit accumulation protein YceD JHS88_10125 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein JHS88_10125 IPR029001 Inosine triphosphate pyrophosphatase-like JHS88_10130 IPR036986 RNA-binding S4 domain superfamily JHS88_10130 IPR002942 RNA-binding S4 domain JHS88_10130 IPR006145 Pseudouridine synthase, RsuA/RluA JHS88_10130 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site JHS88_10130 IPR006225 Pseudouridine synthase, RluC/RluD JHS88_10130 IPR020103 Pseudouridine synthase, catalytic domain superfamily JHS88_10135 IPR012340 Nucleic acid-binding, OB-fold JHS88_10135 IPR021968 Polyribonucleotide phosphorylase C-terminal JHS88_10135 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G JHS88_10135 IPR028878 Ribonuclease E JHS88_10135 IPR004659 Ribonuclease E/G JHS88_10135 IPR022967 RNA-binding domain, S1 JHS88_10135 IPR003029 S1 domain JHS88_10140 IPR036513 STAS domain superfamily JHS88_10140 IPR001902 SLC26A/SulP transporter JHS88_10140 IPR002645 STAS domain JHS88_10140 IPR018045 Sulphate anion transporter, conserved site JHS88_10140 IPR011547 SLC26A/SulP transporter domain JHS88_10145 IPR023485 Phosphotyrosine protein phosphatase I JHS88_10145 IPR036196 Phosphotyrosine protein phosphatase I superfamily JHS88_10145 IPR017867 Protein-tyrosine phosphatase, low molecular weight JHS88_10150 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain JHS88_10150 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_10150 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR JHS88_10160 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_10160 IPR006083 Phosphoribulokinase/uridine kinase JHS88_10160 IPR026008 Uridine kinase JHS88_10160 IPR000764 Uridine kinase-like JHS88_10165 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 JHS88_10165 IPR000808 Mrp, conserved site JHS88_10165 IPR034904 Fe-S cluster assembly domain superfamily JHS88_10165 IPR019591 Mrp/NBP35 ATP-binding protein JHS88_10165 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_10170 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JHS88_10170 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site JHS88_10170 IPR002547 tRNA-binding domain JHS88_10170 IPR012340 Nucleic acid-binding, OB-fold JHS88_10170 IPR029038 Methionyl-tRNA synthetase, Zn-domain JHS88_10170 IPR033911 Methioninyl-tRNA synthetase core domain JHS88_10170 IPR015413 Methionyl/Leucyl tRNA synthetase JHS88_10170 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal JHS88_10170 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain JHS88_10170 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding JHS88_10170 IPR014758 Methionyl-tRNA synthetase JHS88_10170 IPR023458 Methionine-tRNA ligase, type 1 JHS88_10180 IPR014178 Fatty acid response transcription factor FadR JHS88_10180 IPR028374 FadR, C-terminal domain JHS88_10180 IPR036390 Winged helix DNA-binding domain superfamily JHS88_10180 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_10180 IPR000524 Transcription regulator HTH, GntR JHS88_10180 IPR008920 Transcription regulator FadR/GntR, C-terminal JHS88_10185 IPR004671 Na+/H+ antiporter NhaB JHS88_10190 IPR022920 Disulphide bond formation protein DsbB JHS88_10190 IPR023380 DsbB-like superfamily JHS88_10190 IPR003752 Disulphide bond formation protein DsbB/BdbC JHS88_10195 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_10195 IPR000185 Protein translocase subunit SecA JHS88_10195 IPR020937 SecA conserved site JHS88_10195 IPR004027 SEC-C motif JHS88_10195 IPR011115 SecA DEAD-like, N-terminal JHS88_10195 IPR014018 SecA motor DEAD JHS88_10195 IPR011130 SecA, preprotein cross-linking domain JHS88_10195 IPR011116 SecA Wing/Scaffold JHS88_10195 IPR036266 SecA, Wing/Scaffold superfamily JHS88_10195 IPR036670 SecA, preprotein cross-linking domain superfamily JHS88_10200 IPR013785 Aldolase-type TIM barrel JHS88_10200 IPR042270 tRNA-dihydrouridine(16) synthase, C-terminal JHS88_10200 IPR032886 tRNA-dihydrouridine(16) synthase JHS88_10200 IPR018517 tRNA-dihydrouridine synthase, conserved site JHS88_10200 IPR035587 DUS-like, FMN-binding domain JHS88_10200 IPR001269 tRNA-dihydrouridine synthase JHS88_10205 IPR001789 Signal transduction response regulator, receiver domain JHS88_10205 IPR011006 CheY-like superfamily JHS88_10205 IPR000160 GGDEF domain JHS88_10205 IPR029787 Nucleotide cyclase JHS88_10210 IPR017069 Maltodextrin glucosidase JHS88_10210 IPR014756 Immunoglobulin E-set JHS88_10210 IPR017853 Glycoside hydrolase superfamily JHS88_10210 IPR013780 Glycosyl hydrolase, all-beta JHS88_10210 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain JHS88_10210 IPR006047 Glycosyl hydrolase, family 13, catalytic domain JHS88_10215 IPR003593 AAA+ ATPase domain JHS88_10215 IPR015856 ABC transporter, CbiO/EcfA subunit JHS88_10215 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 JHS88_10215 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_10215 IPR003439 ABC transporter-like JHS88_10215 IPR017871 ABC transporter, conserved site JHS88_10220 IPR001851 ABC transporter, permease JHS88_10230 IPR007334 Uncharacterised protein family UPF0208 JHS88_10235 IPR004372 Acetate/propionate kinase JHS88_10235 IPR023865 Aliphatic acid kinase, short-chain, conserved site JHS88_10235 IPR000890 Aliphatic acid kinase, short-chain JHS88_10240 IPR002505 Phosphate acetyl/butaryl transferase JHS88_10240 IPR042112 Phosphate acetyltransferase, domain 2 JHS88_10240 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily JHS88_10240 IPR004614 Phosphate acetyltransferase JHS88_10240 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_10240 IPR016475 Phosphate acetyltransferase, bacteria JHS88_10240 IPR010766 DRTGG JHS88_10240 IPR042113 Phosphate acetyltransferase, domain 1 JHS88_10245 IPR025105 Domain of unknown function DUF4010 JHS88_10255 IPR040079 Glutathione Transferase family JHS88_10255 IPR010987 Glutathione S-transferase, C-terminal-like JHS88_10255 IPR036249 Thioredoxin-like superfamily JHS88_10255 IPR016639 Glutathione S-transferase Omega/GSH JHS88_10255 IPR036282 Glutathione S-transferase, C-terminal domain superfamily JHS88_10255 IPR004045 Glutathione S-transferase, N-terminal JHS88_10260 IPR017871 ABC transporter, conserved site JHS88_10260 IPR003439 ABC transporter-like JHS88_10260 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal JHS88_10260 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_10260 IPR003593 AAA+ ATPase domain JHS88_10265 IPR003593 AAA+ ATPase domain JHS88_10265 IPR003439 ABC transporter-like JHS88_10265 IPR017871 ABC transporter, conserved site JHS88_10265 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal JHS88_10265 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_10270 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JHS88_10270 IPR025966 Oligopeptide transport permease C-like, N-terminal domain JHS88_10270 IPR035906 MetI-like superfamily JHS88_10275 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JHS88_10275 IPR035906 MetI-like superfamily JHS88_10280 IPR030678 Peptide/nickel binding protein, MppA-type JHS88_10280 IPR039424 Solute-binding protein family 5 JHS88_10280 IPR023765 Solute-binding protein family 5, conserved site JHS88_10280 IPR000914 Solute-binding protein family 5 domain JHS88_10285 IPR003448 Molybdopterin biosynthesis MoaE JHS88_10285 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily JHS88_10290 IPR012675 Beta-grasp domain superfamily JHS88_10290 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp JHS88_10290 IPR003749 Sulfur carrier ThiS/MoaD-like JHS88_10295 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily JHS88_10295 IPR023045 Molybdenum cofactor biosynthesis C JHS88_10295 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain JHS88_10300 IPR036425 MoaB/Mog-like domain superfamily JHS88_10300 IPR001453 MoaB/Mog domain JHS88_10300 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria JHS88_10300 IPR008284 Molybdenum cofactor biosynthesis, conserved site JHS88_10300 IPR012245 Molybdenum cofactor biosynthesis protein MoaB JHS88_10305 IPR013785 Aldolase-type TIM barrel JHS88_10305 IPR010505 Molybdenum cofactor synthesis C-terminal JHS88_10305 IPR013483 Molybdenum cofactor biosynthesis protein A JHS88_10305 IPR007197 Radical SAM JHS88_10305 IPR006638 Elp3/MiaB/NifB JHS88_10310 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 JHS88_10310 IPR010119 Gluconeogenesis factor JHS88_10310 IPR038136 Gluconeogenesis factor superfamily JHS88_10315 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain JHS88_10315 IPR036641 HPT domain superfamily JHS88_10320 IPR025944 Sigma-54 interaction domain, conserved site JHS88_10320 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JHS88_10320 IPR011006 CheY-like superfamily JHS88_10320 IPR009057 Homeobox-like domain superfamily JHS88_10320 IPR002197 DNA binding HTH domain, Fis-type JHS88_10320 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_10320 IPR001789 Signal transduction response regulator, receiver domain JHS88_10320 IPR002078 RNA polymerase sigma factor 54 interaction domain JHS88_10320 IPR003593 AAA+ ATPase domain JHS88_10325 IPR036876 UVR domain superfamily JHS88_10325 IPR001943 UVR domain JHS88_10325 IPR004807 UvrABC system, subunit B JHS88_10325 IPR041471 UvrB, interaction domain JHS88_10325 IPR024759 UvrB, YAD/RRR-motif-containing domain JHS88_10325 IPR006935 Helicase/UvrB, N-terminal JHS88_10325 IPR014001 Helicase superfamily 1/2, ATP-binding domain JHS88_10325 IPR001650 Helicase, C-terminal JHS88_10325 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_10335 IPR003667 NqrDE/RnfAE JHS88_10335 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA JHS88_10340 IPR007202 4Fe-4S domain JHS88_10340 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria JHS88_10340 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB JHS88_10340 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JHS88_10340 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JHS88_10345 IPR009051 Alpha-helical ferredoxin JHS88_10345 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC JHS88_10345 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain JHS88_10345 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JHS88_10345 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JHS88_10345 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily JHS88_10345 IPR019554 Soluble ligand binding domain JHS88_10345 IPR026902 RnfC Barrel sandwich hybrid domain JHS88_10350 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D JHS88_10350 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD JHS88_10355 IPR007329 FMN-binding JHS88_10355 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG JHS88_10360 IPR003667 NqrDE/RnfAE JHS88_10360 IPR010968 Ion-translocating oxidoreductase complex subunit E JHS88_10365 IPR011257 DNA glycosylase JHS88_10365 IPR004036 Endonuclease III-like, conserved site-2 JHS88_10365 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif JHS88_10365 IPR004035 Endonuclease III, iron-sulphur binding site JHS88_10365 IPR003265 HhH-GPD domain JHS88_10365 IPR000445 Helix-hairpin-helix motif JHS88_10365 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal JHS88_10365 IPR005759 Endonuclease III JHS88_10370 IPR037523 Vicinal oxygen chelate (VOC) domain JHS88_10370 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JHS88_10370 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JHS88_10370 IPR004361 Glyoxalase I JHS88_10370 IPR018146 Glyoxalase I, conserved site JHS88_10375 IPR020206 Uncharacterised protein family, VP2110 JHS88_10380 IPR006690 Outer membrane protein, OmpA-like, conserved site JHS88_10380 IPR041544 MotY N-terminal domain JHS88_10380 IPR006665 OmpA-like domain JHS88_10380 IPR036737 OmpA-like domain superfamily JHS88_10385 IPR036397 Ribonuclease H superfamily JHS88_10385 IPR013520 Exonuclease, RNase T/DNA polymerase III JHS88_10385 IPR005987 Ribonuclease T JHS88_10385 IPR012337 Ribonuclease H-like superfamily JHS88_10390 IPR032813 Putative Na+/H+ antiporter, N-terminal JHS88_10390 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal JHS88_10410 IPR003708 Bacterial protein export chaperone SecB JHS88_10410 IPR035958 SecB-like superfamily JHS88_10430 IPR008766 Replication gene A protein JHS88_10455 IPR009679 Bacteriophage 186, CII JHS88_10475 IPR003615 HNH nuclease JHS88_10475 IPR002711 HNH endonuclease JHS88_10495 IPR001525 C-5 cytosine methyltransferase JHS88_10495 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_10505 IPR036249 Thioredoxin-like superfamily JHS88_10505 IPR004480 Monothiol glutaredoxin-related JHS88_10505 IPR014434 Monothiol glutaredoxin JHS88_10505 IPR033658 Glutaredoxin, PICOT-like JHS88_10505 IPR002109 Glutaredoxin JHS88_10510 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily JHS88_10510 IPR019831 Manganese/iron superoxide dismutase, N-terminal JHS88_10510 IPR019832 Manganese/iron superoxide dismutase, C-terminal JHS88_10510 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily JHS88_10510 IPR001189 Manganese/iron superoxide dismutase JHS88_10510 IPR019833 Manganese/iron superoxide dismutase, binding site JHS88_10525 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase JHS88_10525 IPR034789 Bifunctional aldehyde-alcohol dehydrogenase, C-terminal domain JHS88_10525 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA JHS88_10525 IPR018211 Alcohol dehydrogenase, iron-type, conserved site JHS88_10525 IPR039697 Iron-type alcohol dehydrogenase-like JHS88_10525 IPR016161 Aldehyde/histidinol dehydrogenase JHS88_10525 IPR016163 Aldehyde dehydrogenase, C-terminal JHS88_10525 IPR016162 Aldehyde dehydrogenase, N-terminal JHS88_10525 IPR015590 Aldehyde dehydrogenase domain JHS88_10530 IPR002771 Multiple antibiotic resistance (MarC)-related JHS88_10535 IPR018488 Cyclic nucleotide-binding, conserved site JHS88_10535 IPR018490 Cyclic nucleotide-binding-like JHS88_10535 IPR028325 Voltage-gated potassium channel JHS88_10535 IPR005821 Ion transport domain JHS88_10535 IPR000595 Cyclic nucleotide-binding domain JHS88_10535 IPR014710 RmlC-like jelly roll fold JHS88_10540 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site JHS88_10540 IPR000534 Semialdehyde dehydrogenase, NAD-binding JHS88_10540 IPR036291 NAD(P)-binding domain superfamily JHS88_10540 IPR012280 Semialdehyde dehydrogenase, dimerisation domain JHS88_10540 IPR012080 Aspartate-semialdehyde dehydrogenase JHS88_10540 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type JHS88_10545 IPR004770 Na+/H+ antiporter NhaC JHS88_10545 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal JHS88_10560 IPR007358 Nucleoid-associated protein NdpA JHS88_10565 IPR009857 Uncharacterised protein family UPF0352 JHS88_10565 IPR023202 YejL-like superfamily JHS88_10570 IPR024588 Inner membrane protein YejM, N-terminal JHS88_10570 IPR017850 Alkaline-phosphatase-like, core domain superfamily JHS88_10570 IPR012159 Inner membrane protein YejM JHS88_10570 IPR000917 Sulfatase, N-terminal JHS88_10580 IPR000286 Histone deacetylase family JHS88_10580 IPR023801 Histone deacetylase domain JHS88_10580 IPR037138 Histone deacetylase domain superfamily JHS88_10580 IPR023696 Ureohydrolase domain superfamily JHS88_10585 IPR036291 NAD(P)-binding domain superfamily JHS88_10585 IPR002347 Short-chain dehydrogenase/reductase SDR JHS88_10595 IPR000380 DNA topoisomerase, type IA JHS88_10595 IPR013497 DNA topoisomerase, type IA, central JHS88_10595 IPR003601 DNA topoisomerase, type IA, domain 2 JHS88_10595 IPR006171 TOPRIM domain JHS88_10595 IPR005738 DNA topoisomerase III JHS88_10595 IPR003602 DNA topoisomerase, type IA, DNA-binding domain JHS88_10595 IPR034144 DNA topoisomerase 3-like, TOPRIM domain JHS88_10595 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 JHS88_10595 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 JHS88_10595 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 JHS88_10595 IPR023405 DNA topoisomerase, type IA, core domain JHS88_10595 IPR023406 DNA topoisomerase, type IA, active site JHS88_10600 IPR029479 Nitroreductase JHS88_10600 IPR000415 Nitroreductase-like JHS88_10600 IPR026021 Putative NAD(P)H nitroreductase YdjA-like JHS88_10605 IPR013785 Aldolase-type TIM barrel JHS88_10605 IPR036188 FAD/NAD(P)-binding domain superfamily JHS88_10605 IPR023753 FAD/NAD(P)-binding domain JHS88_10605 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal JHS88_10610 IPR033854 Signal peptide peptidase A JHS88_10610 IPR029045 ClpP/crotonase-like domain superfamily JHS88_10610 IPR004634 Peptidase S49, protease IV JHS88_10610 IPR004635 Peptidase S49, SppA JHS88_10610 IPR002142 Peptidase S49 JHS88_10615 IPR041725 Type I (cytosolic) L-asparaginase JHS88_10615 IPR006033 Type I L-asparaginase family JHS88_10615 IPR036152 Asparaginase/glutaminase-like superfamily JHS88_10615 IPR006034 Asparaginase/glutaminase-like JHS88_10615 IPR020827 Asparaginase/glutaminase, active site 1 JHS88_10615 IPR027475 Asparaginase/glutaminase, active site 2 JHS88_10615 IPR040919 Asparaginase/glutaminase, C-terminal JHS88_10615 IPR027473 L-asparaginase, C-terminal JHS88_10615 IPR027474 L-asparaginase, N-terminal JHS88_10615 IPR037152 L-asparaginase, N-terminal domain superfamily JHS88_10620 IPR009749 Protein of unknown function DUF1315 JHS88_10630 IPR028427 Peptide methionine sulfoxide reductase JHS88_10630 IPR002579 Peptide methionine sulphoxide reductase MrsB JHS88_10630 IPR011057 Mss4-like superfamily JHS88_10635 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain JHS88_10635 IPR036291 NAD(P)-binding domain superfamily JHS88_10635 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I JHS88_10635 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain JHS88_10635 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site JHS88_10635 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family JHS88_10640 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase JHS88_10640 IPR025532 Glucose-6-phosphate 1-epimerase JHS88_10640 IPR011013 Galactose mutarotase-like domain superfamily JHS88_10640 IPR014718 Glycoside hydrolase-type carbohydrate-binding JHS88_10645 IPR033479 Double Cache domain 1 JHS88_10645 IPR003660 HAMP domain JHS88_10645 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JHS88_10645 IPR029151 Periplasmic sensor-like domain superfamily JHS88_10650 IPR025714 Methyltransferase domain JHS88_10650 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted JHS88_10650 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_10665 IPR017850 Alkaline-phosphatase-like, core domain superfamily JHS88_10665 IPR018299 Alkaline phosphatase, active site JHS88_10665 IPR001952 Alkaline phosphatase JHS88_10675 IPR018146 Glyoxalase I, conserved site JHS88_10675 IPR004361 Glyoxalase I JHS88_10675 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JHS88_10675 IPR037523 Vicinal oxygen chelate (VOC) domain JHS88_10675 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JHS88_10680 IPR011008 Dimeric alpha-beta barrel JHS88_10680 IPR007138 Antibiotic biosynthesis monooxygenase domain JHS88_10685 IPR008910 Conserved TM helix JHS88_10685 IPR023408 Mechanosensitive ion channel MscS domain superfamily JHS88_10685 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 JHS88_10685 IPR006686 Mechanosensitive ion channel MscS, conserved site JHS88_10685 IPR011066 Mechanosensitive ion channel MscS, C-terminal JHS88_10685 IPR006685 Mechanosensitive ion channel MscS JHS88_10685 IPR010920 LSM domain superfamily JHS88_10690 IPR008228 Uncharacterised conserved protein UCP006173 JHS88_10690 IPR005358 Putative zinc- or iron-chelating domain containing protein JHS88_10695 IPR007341 Transglycosylase-associated protein JHS88_10700 IPR005358 Putative zinc- or iron-chelating domain containing protein JHS88_10710 IPR021144 Uncharacterised protein family UPF0597 JHS88_10710 IPR005130 Serine dehydratase-like, alpha subunit JHS88_10715 IPR006175 YjgF/YER057c/UK114 family JHS88_10715 IPR019897 RidA, conserved site JHS88_10715 IPR035959 RutC-like superfamily JHS88_10715 IPR006056 RidA family JHS88_10725 IPR023271 Aquaporin-like JHS88_10725 IPR034294 Aquaporin transporter JHS88_10725 IPR023743 Aquaporin Z JHS88_10725 IPR000425 Major intrinsic protein JHS88_10725 IPR022357 Major intrinsic protein, conserved site JHS88_10730 IPR000093 DNA recombination protein RecR JHS88_10730 IPR023627 Recombination protein RecR JHS88_10730 IPR023628 Recombination protein RecR, C4-type zinc finger JHS88_10730 IPR015967 Recombination protein RecR, conserved site JHS88_10730 IPR006171 TOPRIM domain JHS88_10730 IPR034137 RecR, TOPRIM domain JHS88_10735 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily JHS88_10735 IPR004401 Nucleoid-associated protein YbaB/EbfC family JHS88_10740 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal JHS88_10740 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV JHS88_10740 IPR001270 ClpA/B family JHS88_10740 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily JHS88_10740 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_10740 IPR003593 AAA+ ATPase domain JHS88_10740 IPR012763 DNA polymerase III, subunit gamma/ tau JHS88_10740 IPR022754 DNA polymerase III, gamma subunit, domain III JHS88_10740 IPR021029 DNA polymerase III, tau subunit, domain V JHS88_10745 IPR005764 Adenine phosphoribosyl transferase JHS88_10745 IPR000836 Phosphoribosyltransferase domain JHS88_10745 IPR029057 Phosphoribosyltransferase-like JHS88_10750 IPR007401 Protein of unknown function DUF454 JHS88_10755 IPR001789 Signal transduction response regulator, receiver domain JHS88_10755 IPR039420 Transcriptional regulatory protein WalR-like JHS88_10755 IPR036457 PPM-type phosphatase domain superfamily JHS88_10755 IPR011006 CheY-like superfamily JHS88_10755 IPR028616 Regulator of RpoS JHS88_10760 IPR005119 LysR, substrate-binding JHS88_10760 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_10760 IPR036390 Winged helix DNA-binding domain superfamily JHS88_10760 IPR000847 Transcription regulator HTH, LysR JHS88_10765 IPR017932 Glutamine amidotransferase type 2 domain JHS88_10765 IPR029055 Nucleophile aminohydrolases, N-terminal JHS88_10765 IPR000836 Phosphoribosyltransferase domain JHS88_10765 IPR029057 Phosphoribosyltransferase-like JHS88_10765 IPR005854 Amidophosphoribosyltransferase JHS88_10765 IPR035584 Amidophosphoribosyltransferase, N-terminal JHS88_10770 IPR003825 Colicin V production, CvpA JHS88_10775 IPR007730 Sporulation-like domain JHS88_10775 IPR032898 Cell division protein DedD JHS88_10775 IPR036680 Sporulation-like domain superfamily JHS88_10780 IPR036565 Mur-like, catalytic domain superfamily JHS88_10780 IPR004101 Mur ligase, C-terminal JHS88_10780 IPR036615 Mur ligase, C-terminal domain superfamily JHS88_10780 IPR013221 Mur ligase, central JHS88_10780 IPR018109 Folylpolyglutamate synthetase, conserved site JHS88_10780 IPR001645 Folylpolyglutamate synthetase JHS88_10785 IPR034733 Acetyl-CoA carboxylase JHS88_10785 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit JHS88_10785 IPR029045 ClpP/crotonase-like domain superfamily JHS88_10785 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal JHS88_10785 IPR041010 Acetyl-coA carboxylase zinc finger domain JHS88_10790 IPR020095 Pseudouridine synthase I, TruA, C-terminal JHS88_10790 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain JHS88_10790 IPR020103 Pseudouridine synthase, catalytic domain superfamily JHS88_10790 IPR001406 Pseudouridine synthase I, TruA JHS88_10800 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site JHS88_10800 IPR012080 Aspartate-semialdehyde dehydrogenase JHS88_10800 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type JHS88_10800 IPR036291 NAD(P)-binding domain superfamily JHS88_10800 IPR000534 Semialdehyde dehydrogenase, NAD-binding JHS88_10800 IPR012280 Semialdehyde dehydrogenase, dimerisation domain JHS88_10805 IPR036291 NAD(P)-binding domain superfamily JHS88_10805 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JHS88_10805 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site JHS88_10805 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain JHS88_10805 IPR020921 Erythronate-4-phosphate dehydrogenase JHS88_10805 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain JHS88_10805 IPR038251 PdxB, dimerisation domain superfamily JHS88_10810 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain JHS88_10810 IPR014030 Beta-ketoacyl synthase, N-terminal JHS88_10810 IPR016039 Thiolase-like JHS88_10810 IPR014031 Beta-ketoacyl synthase, C-terminal JHS88_10810 IPR000794 Beta-ketoacyl synthase JHS88_10810 IPR018201 Beta-ketoacyl synthase, active site JHS88_10815 IPR006076 FAD dependent oxidoreductase JHS88_10815 IPR036188 FAD/NAD(P)-binding domain superfamily JHS88_10815 IPR008471 MnmC-like methyltransferase JHS88_10815 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC JHS88_10815 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal JHS88_10820 IPR029039 Flavoprotein-like superfamily JHS88_10820 IPR005025 NADPH-dependent FMN reductase-like JHS88_10825 IPR014987 Uncharacterised protein family YfcL JHS88_10830 IPR007411 Elongation factor P hydroxylase JHS88_10835 IPR005115 Uncharacterised domain UPF0126 JHS88_10840 IPR020541 Chorismate synthase, conserved site JHS88_10840 IPR035904 Chorismate synthase AroC superfamily JHS88_10840 IPR000453 Chorismate synthase JHS88_10845 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_10845 IPR002052 DNA methylase, N-6 adenine-specific, conserved site JHS88_10845 IPR004556 Methyltransferase HemK-like JHS88_10845 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific JHS88_10845 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase JHS88_10845 IPR007848 Methyltransferase small domain JHS88_10850 IPR002625 Smr domain JHS88_10850 IPR022990 Uncharacterised protein family UPF0115 JHS88_10850 IPR036063 Smr domain superfamily JHS88_10855 IPR013078 Histidine phosphatase superfamily, clade-1 JHS88_10855 IPR029033 Histidine phosphatase superfamily JHS88_10855 IPR004449 Phosphohistidine phosphatase SixA JHS88_10860 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like JHS88_10860 IPR011765 Peptidase M16, N-terminal JHS88_10860 IPR001431 Peptidase M16, zinc-binding site JHS88_10860 IPR007863 Peptidase M16, C-terminal JHS88_10860 IPR032632 Peptidase M16, middle/third domain JHS88_10870 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily JHS88_10870 IPR036291 NAD(P)-binding domain superfamily JHS88_10870 IPR012802 Fatty oxidation complex, alpha subunit FadJ JHS88_10870 IPR001753 Enoyl-CoA hydratase/isomerase JHS88_10870 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site JHS88_10870 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal JHS88_10870 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding JHS88_10870 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site JHS88_10870 IPR029045 ClpP/crotonase-like domain superfamily JHS88_10875 IPR020617 Thiolase, C-terminal JHS88_10875 IPR012806 Acetyl-CoA C-acyltransferase FadI JHS88_10875 IPR002155 Thiolase JHS88_10875 IPR016039 Thiolase-like JHS88_10875 IPR020613 Thiolase, conserved site JHS88_10875 IPR020616 Thiolase, N-terminal JHS88_10880 IPR007627 RNA polymerase sigma-70 region 2 JHS88_10880 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_10880 IPR013324 RNA polymerase sigma factor, region 3/4-like JHS88_10880 IPR013325 RNA polymerase sigma factor, region 2 JHS88_10880 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 JHS88_10880 IPR039425 RNA polymerase sigma-70 like JHS88_10880 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site JHS88_10880 IPR014284 RNA polymerase sigma-70 like domain JHS88_10895 IPR042117 OMPP1/FadL/TodX superfamily JHS88_10895 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) JHS88_10900 IPR007428 MlaA lipoprotein JHS88_10910 IPR019734 Tetratricopeptide repeat JHS88_10910 IPR011990 Tetratricopeptide-like helical domain superfamily JHS88_10910 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily JHS88_10910 IPR005616 CcmH/CycL/Ccl2/NrfF family JHS88_10910 IPR013026 Tetratricopeptide repeat-containing domain JHS88_10910 IPR017560 Cytochrome c-type biogenesis protein CcmI JHS88_10915 IPR017937 Thioredoxin, conserved site JHS88_10915 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE JHS88_10915 IPR013740 Redoxin JHS88_10915 IPR036249 Thioredoxin-like superfamily JHS88_10915 IPR013766 Thioredoxin domain JHS88_10920 IPR003568 Cytochrome c-type biogenesis protein CcmF JHS88_10920 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal JHS88_10920 IPR002541 Cytochrome c assembly protein JHS88_10920 IPR003567 Cytochrome c-type biogenesis protein JHS88_10925 IPR036127 CcmE-like superfamily JHS88_10925 IPR004329 CcmE/CycJ protein JHS88_10930 IPR007078 Haem exporter protein D (CcmD) JHS88_10935 IPR002541 Cytochrome c assembly protein JHS88_10935 IPR003557 Cytochrome c-type biogenesis protein CcmC JHS88_10940 IPR003544 Cytochrome c-type biogenesis protein CcmB JHS88_10940 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria JHS88_10945 IPR003593 AAA+ ATPase domain JHS88_10945 IPR005895 ABC transporter, haem export, CcmA JHS88_10945 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_10945 IPR003439 ABC transporter-like JHS88_10945 IPR017871 ABC transporter, conserved site JHS88_10955 IPR039315 Chemotaxis protein CheW JHS88_10955 IPR036061 CheW-like domain superfamily JHS88_10955 IPR002545 CheW-like domain JHS88_10965 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_10965 IPR025669 AAA domain JHS88_10970 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type JHS88_10970 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase JHS88_10970 IPR011006 CheY-like superfamily JHS88_10970 IPR001789 Signal transduction response regulator, receiver domain JHS88_10970 IPR035909 Methylesterase CheB, C-terminal JHS88_10975 IPR005467 Histidine kinase domain JHS88_10975 IPR001789 Signal transduction response regulator, receiver domain JHS88_10975 IPR004105 Histidine kinase CheA-like, homodimeric domain JHS88_10975 IPR036061 CheW-like domain superfamily JHS88_10975 IPR002545 CheW-like domain JHS88_10975 IPR011006 CheY-like superfamily JHS88_10975 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_10975 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily JHS88_10975 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_10975 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JHS88_10975 IPR036641 HPT domain superfamily JHS88_10975 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JHS88_10975 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain JHS88_10980 IPR007439 Chemotaxis phosphatase, CheZ JHS88_10985 IPR001789 Signal transduction response regulator, receiver domain JHS88_10985 IPR011006 CheY-like superfamily JHS88_10990 IPR028617 RNA polymerase sigma factor FliA JHS88_10990 IPR013324 RNA polymerase sigma factor, region 3/4-like JHS88_10990 IPR013325 RNA polymerase sigma factor, region 2 JHS88_10990 IPR012845 RNA polymerase sigma factor, FliA/WhiG JHS88_10990 IPR007624 RNA polymerase sigma-70 region 3 JHS88_10990 IPR007627 RNA polymerase sigma-70 region 2 JHS88_10990 IPR014284 RNA polymerase sigma-70 like domain JHS88_10990 IPR007630 RNA polymerase sigma-70 region 4 JHS88_10990 IPR000943 RNA polymerase sigma-70 JHS88_10995 IPR025501 ATP binding protein MinD JHS88_10995 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_10995 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 JHS88_11000 IPR003593 AAA+ ATPase domain JHS88_11000 IPR020006 Flagellar biosynthesis protein FlhF JHS88_11000 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain JHS88_11000 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_11005 IPR042194 FHIPEP, domain 1 JHS88_11005 IPR042193 FHIPEP, domain 3 JHS88_11005 IPR042196 FHIPEP, domain 4 JHS88_11005 IPR025505 FHIPEP conserved site JHS88_11005 IPR006301 Flagellar biosynthesis protein FlhA JHS88_11005 IPR001712 Type III secretion system FHIPEP JHS88_11010 IPR006136 Flagellar biosynthetic protein FlhB JHS88_11010 IPR029025 Type III secretion system substrate exporter, C-terminal JHS88_11010 IPR006135 Type III secretion system substrate exporter JHS88_11015 IPR002010 Type III secretion system inner membrane R protein JHS88_11015 IPR006303 Flagellar biosynthesis protein FliR JHS88_11020 IPR006305 Flagellar biosynthesis protein FliQ JHS88_11020 IPR002191 Bacterial export protein family 3 JHS88_11025 IPR005838 Type III secretion system inner membrane P protein JHS88_11025 IPR005837 Flagellar transport protein FliP JHS88_11030 IPR022781 Flagellar biosynthesis protein, FliO JHS88_11035 IPR036429 SpoA-like superfamily JHS88_11035 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb JHS88_11035 IPR001543 Surface presentation of antigen (SpoA) JHS88_11035 IPR012826 Flagellar motor switch FliN JHS88_11040 IPR028976 CheC-like superfamily JHS88_11040 IPR001689 Flagellar motor switch protein FliM JHS88_11040 IPR001543 Surface presentation of antigen (SpoA) JHS88_11040 IPR036429 SpoA-like superfamily JHS88_11060 IPR003593 AAA+ ATPase domain JHS88_11060 IPR020005 Flagellar export ATPase FliI, clade 1 JHS88_11060 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site JHS88_11060 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain JHS88_11060 IPR032463 ATPase, type III secretion system, FliI JHS88_11060 IPR005714 ATPase, type III secretion system, FliI/YscN JHS88_11060 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_11060 IPR040627 T3SS EscN ATPase, C-terminal JHS88_11070 IPR000090 Flagellar motor switch protein FliG JHS88_11070 IPR023087 Flagellar motor switch protein FliG, C-terminal JHS88_11070 IPR011002 Flagellar motor switch protein FliG, alpha-helical JHS88_11070 IPR032779 Flagellar motor switch protein FliG, middle domain JHS88_11070 IPR028263 Flagellar motor switch protein FliG, N-terminal domain JHS88_11075 IPR006182 Secretory protein YscJ/FliF JHS88_11075 IPR000067 Flagellar M-ring protein FliF JHS88_11075 IPR013556 Flagellar M-ring C-terminal JHS88_11080 IPR001624 Flagellar hook-basal body complex protein FliE JHS88_11085 IPR025944 Sigma-54 interaction domain, conserved site JHS88_11085 IPR029995 Transcriptional activator SfnR/FlbD JHS88_11085 IPR003593 AAA+ ATPase domain JHS88_11085 IPR011006 CheY-like superfamily JHS88_11085 IPR009057 Homeobox-like domain superfamily JHS88_11085 IPR002078 RNA polymerase sigma factor 54 interaction domain JHS88_11085 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_11085 IPR001789 Signal transduction response regulator, receiver domain JHS88_11085 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JHS88_11085 IPR002197 DNA binding HTH domain, Fis-type JHS88_11085 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 JHS88_11090 IPR035965 PAS domain superfamily JHS88_11090 IPR000014 PAS domain JHS88_11090 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JHS88_11090 IPR005467 Histidine kinase domain JHS88_11090 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_11090 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_11090 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JHS88_11090 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JHS88_11095 IPR025944 Sigma-54 interaction domain, conserved site JHS88_11095 IPR011006 CheY-like superfamily JHS88_11095 IPR010518 Flagellar regulatory FleQ JHS88_11095 IPR009057 Homeobox-like domain superfamily JHS88_11095 IPR002197 DNA binding HTH domain, Fis-type JHS88_11095 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_11095 IPR002078 RNA polymerase sigma factor 54 interaction domain JHS88_11095 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 JHS88_11095 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JHS88_11095 IPR003593 AAA+ ATPase domain JHS88_11100 IPR003713 Flagellar protein FliS JHS88_11100 IPR036584 Flagellar protein FliS superfamily JHS88_11110 IPR010810 Flagellin hook, IN motif JHS88_11110 IPR040026 Flagellar hook-associated protein 2 JHS88_11110 IPR010809 Flagellar hook-associated protein 2, C-terminal JHS88_11110 IPR003481 Flagellar hook-associated protein 2, N-terminal JHS88_11115 IPR005186 FlaG protein JHS88_11115 IPR035924 FlaG-like superfamily JHS88_11120 IPR010810 Flagellin hook, IN motif JHS88_11120 IPR001029 Flagellin, D0/D1 domain JHS88_11120 IPR001492 Flagellin JHS88_11120 IPR042187 Flagellin, C-terminal domain, subdomain 2 JHS88_11125 IPR042187 Flagellin, C-terminal domain, subdomain 2 JHS88_11125 IPR001492 Flagellin JHS88_11125 IPR010810 Flagellin hook, IN motif JHS88_11125 IPR001029 Flagellin, D0/D1 domain JHS88_11130 IPR010810 Flagellin hook, IN motif JHS88_11130 IPR001029 Flagellin, D0/D1 domain JHS88_11130 IPR042187 Flagellin, C-terminal domain, subdomain 2 JHS88_11130 IPR001492 Flagellin JHS88_11135 IPR011008 Dimeric alpha-beta barrel JHS88_11135 IPR006314 Dyp-type peroxidase JHS88_11140 IPR021318 Protein of unknown function DUF2919 JHS88_11160 IPR006504 Transcriptional regulator Spx/MgsR JHS88_11160 IPR006660 Arsenate reductase-like JHS88_11160 IPR036249 Thioredoxin-like superfamily JHS88_11165 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site JHS88_11165 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria JHS88_11165 IPR002933 Peptidase M20 JHS88_11165 IPR011650 Peptidase M20, dimerisation domain JHS88_11165 IPR036264 Bacterial exopeptidase dimerisation domain JHS88_11180 IPR014524 Outer membrane protein assembly factor BamC JHS88_11180 IPR042268 Outer membrane protein assembly factor BamC, C-terminal JHS88_11180 IPR010653 NlpB/DapX lipoprotein JHS88_11185 IPR020625 Schiff base-forming aldolase, active site JHS88_11185 IPR020624 Schiff base-forming aldolase, conserved site JHS88_11185 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA JHS88_11185 IPR013785 Aldolase-type TIM barrel JHS88_11185 IPR002220 DapA-like JHS88_11190 IPR002912 ACT domain JHS88_11190 IPR016867 Glycine cleavage system transcriptional repressor JHS88_11195 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant JHS88_11195 IPR036249 Thioredoxin-like superfamily JHS88_11195 IPR013766 Thioredoxin domain JHS88_11200 IPR002549 Transmembrane protein TqsA-like JHS88_11210 IPR001915 Peptidase M48 JHS88_11210 IPR030873 Beta-barrel assembly-enhancing protease JHS88_11210 IPR013026 Tetratricopeptide repeat-containing domain JHS88_11210 IPR011990 Tetratricopeptide-like helical domain superfamily JHS88_11210 IPR019734 Tetratricopeptide repeat JHS88_11215 IPR036249 Thioredoxin-like superfamily JHS88_11215 IPR006660 Arsenate reductase-like JHS88_11215 IPR006659 Arsenate reductase JHS88_11220 IPR005025 NADPH-dependent FMN reductase-like JHS88_11220 IPR010089 Flavoprotein WrbA-like JHS88_11220 IPR008254 Flavodoxin/nitric oxide synthase JHS88_11220 IPR001226 Flavodoxin, conserved site JHS88_11220 IPR029039 Flavoprotein-like superfamily JHS88_11235 IPR029935 Uracil permease JHS88_11235 IPR006042 Xanthine/uracil permease JHS88_11235 IPR006043 Xanthine/uracil/vitamin C permease JHS88_11240 IPR005765 Uracil phosphoribosyl transferase JHS88_11240 IPR000836 Phosphoribosyltransferase domain JHS88_11240 IPR029057 Phosphoribosyltransferase-like JHS88_11240 IPR034332 Uracil phosphoribosyltransferase, bacterial-type JHS88_11245 IPR016188 PurM-like, N-terminal domain JHS88_11245 IPR036921 PurM-like, N-terminal domain superfamily JHS88_11245 IPR010918 PurM-like, C-terminal domain JHS88_11245 IPR036676 PurM-like, C-terminal domain superfamily JHS88_11245 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase JHS88_11250 IPR002376 Formyl transferase, N-terminal JHS88_11250 IPR036477 Formyl transferase, N-terminal domain superfamily JHS88_11250 IPR004607 Phosphoribosylglycinamide formyltransferase JHS88_11250 IPR001555 Phosphoribosylglycinamide formyltransferase, active site JHS88_11255 IPR017932 Glutamine amidotransferase type 2 domain JHS88_11255 IPR029055 Nucleophile aminohydrolases, N-terminal JHS88_11255 IPR026869 Putative glutamine amidotransferase type 2 JHS88_11260 IPR004515 Phosphoheptose isomerase JHS88_11260 IPR001347 Sugar isomerase (SIS) JHS88_11260 IPR035461 GmhA/DiaA JHS88_11265 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type JHS88_11265 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain JHS88_11265 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal JHS88_11265 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal JHS88_11265 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal JHS88_11265 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily JHS88_11265 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily JHS88_11275 IPR000182 GNAT domain JHS88_11275 IPR006464 N-acetyltransferase RimI/Ard1 JHS88_11275 IPR016181 Acyl-CoA N-acyltransferase JHS88_11295 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain JHS88_11295 IPR006309 DNA polymerase 3, epsilon subunit JHS88_11295 IPR013520 Exonuclease, RNase T/DNA polymerase III JHS88_11295 IPR012337 Ribonuclease H-like superfamily JHS88_11295 IPR036397 Ribonuclease H superfamily JHS88_11300 IPR012337 Ribonuclease H-like superfamily JHS88_11300 IPR002156 Ribonuclease H domain JHS88_11300 IPR036397 Ribonuclease H superfamily JHS88_11300 IPR022892 Ribonuclease HI JHS88_11305 IPR026669 Arsenite methyltransferase-like JHS88_11305 IPR013216 Methyltransferase type 11 JHS88_11305 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_11310 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JHS88_11310 IPR001279 Metallo-beta-lactamase JHS88_11310 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain JHS88_11310 IPR017782 Hydroxyacylglutathione hydrolase JHS88_11310 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain JHS88_11315 IPR018392 LysM domain JHS88_11315 IPR036779 LysM domain superfamily JHS88_11315 IPR023346 Lysozyme-like domain superfamily JHS88_11315 IPR000189 Prokaryotic transglycosylase, active site JHS88_11315 IPR008258 Transglycosylase SLT domain 1 JHS88_11325 IPR036691 Endonuclease/exonuclease/phosphatase superfamily JHS88_11325 IPR005135 Endonuclease/exonuclease/phosphatase JHS88_11325 IPR022958 Uncharacterised protein family UPF0294 JHS88_11330 IPR017918 Nitrogen regulatory protein PII, conserved site JHS88_11330 IPR002332 Nitrogen regulatory protein P-II, urydylation site JHS88_11330 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal JHS88_11330 IPR011322 Nitrogen regulatory PII-like, alpha/beta JHS88_11330 IPR002187 Nitrogen regulatory protein PII JHS88_11335 IPR009056 Cytochrome c-like domain JHS88_11335 IPR036909 Cytochrome c-like domain superfamily JHS88_11335 IPR008168 Cytochrome c, class IC JHS88_11340 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal JHS88_11340 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JHS88_11340 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal JHS88_11340 IPR012094 tRNA(Ile)-lysidine synthase JHS88_11340 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal JHS88_11340 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain JHS88_11345 IPR029045 ClpP/crotonase-like domain superfamily JHS88_11345 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal JHS88_11345 IPR001095 Acetyl-CoA carboxylase, alpha subunit JHS88_11350 IPR016195 Polymerase/histidinol phosphatase-like JHS88_11350 IPR004013 PHP domain JHS88_11350 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type JHS88_11350 IPR029460 DNA polymerase, helix-hairpin-helix motif JHS88_11350 IPR003141 Polymerase/histidinol phosphatase, N-terminal JHS88_11350 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain JHS88_11350 IPR040982 DNA polymerase III alpha subunit finger domain JHS88_11350 IPR004805 DNA polymerase III, alpha subunit JHS88_11350 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain JHS88_11355 IPR036397 Ribonuclease H superfamily JHS88_11355 IPR012337 Ribonuclease H-like superfamily JHS88_11355 IPR001352 Ribonuclease HII/HIII JHS88_11355 IPR022898 Ribonuclease HII JHS88_11355 IPR024567 Ribonuclease HII/HIII domain JHS88_11360 IPR003835 Glycosyl transferase, family 19 JHS88_11365 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal JHS88_11365 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily JHS88_11365 IPR001451 Hexapeptide repeat JHS88_11365 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase JHS88_11365 IPR011004 Trimeric LpxA-like superfamily JHS88_11370 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ JHS88_11370 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ JHS88_11370 IPR029069 HotDog domain superfamily JHS88_11375 IPR011004 Trimeric LpxA-like superfamily JHS88_11375 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region JHS88_11375 IPR001451 Hexapeptide repeat JHS88_11375 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD JHS88_11380 IPR005632 Chaperone protein Skp JHS88_11380 IPR024930 Skp domain superfamily JHS88_11385 IPR000184 Bacterial surface antigen (D15) JHS88_11385 IPR010827 POTRA domain, BamA/TamA-like JHS88_11385 IPR039910 Surface antigen D15-like JHS88_11385 IPR023707 Outer membrane protein assembly factor BamA JHS88_11385 IPR034746 POTRA domain JHS88_11390 IPR001478 PDZ domain JHS88_11390 IPR041489 PDZ domain 6 JHS88_11390 IPR036034 PDZ superfamily JHS88_11390 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase JHS88_11390 IPR008915 Peptidase M50 JHS88_11395 IPR036169 DXP reductoisomerase, C-terminal domain superfamily JHS88_11395 IPR036291 NAD(P)-binding domain superfamily JHS88_11395 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal JHS88_11395 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal JHS88_11395 IPR026877 DXP reductoisomerase C-terminal domain JHS88_11395 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase JHS88_11400 IPR000374 Phosphatidate cytidylyltransferase JHS88_11405 IPR001441 Decaprenyl diphosphate synthase-like JHS88_11405 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site JHS88_11405 IPR036424 Decaprenyl diphosphate synthase-like superfamily JHS88_11410 IPR002661 Ribosome recycling factor JHS88_11410 IPR023584 Ribosome recycling factor domain JHS88_11410 IPR036191 RRF superfamily JHS88_11415 IPR036393 Acetylglutamate kinase-like superfamily JHS88_11415 IPR001048 Aspartate/glutamate/uridylate kinase JHS88_11415 IPR011817 Uridylate kinase JHS88_11415 IPR015963 Uridylate kinase, bacteria JHS88_11420 IPR018101 Translation elongation factor Ts, conserved site JHS88_11420 IPR009060 UBA-like superfamily JHS88_11420 IPR001816 Translation elongation factor EFTs/EF1B JHS88_11420 IPR036402 Elongation factor Ts, dimerisation domain superfamily JHS88_11420 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation JHS88_11425 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily JHS88_11425 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid JHS88_11425 IPR001865 Ribosomal protein S2 JHS88_11425 IPR018130 Ribosomal protein S2, conserved site JHS88_11430 IPR036005 Creatinase/aminopeptidase-like JHS88_11430 IPR000994 Peptidase M24 JHS88_11430 IPR001714 Peptidase M24, methionine aminopeptidase JHS88_11430 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 JHS88_11435 IPR003607 HD/PDEase domain JHS88_11435 IPR006674 HD domain JHS88_11435 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase JHS88_11435 IPR002934 Polymerase, nucleotidyl transferase domain JHS88_11435 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme JHS88_11435 IPR002912 ACT domain JHS88_11440 IPR020911 Uncharacterised protein family UPF0325 JHS88_11445 IPR006145 Pseudouridine synthase, RsuA/RluA JHS88_11445 IPR020103 Pseudouridine synthase, catalytic domain superfamily JHS88_11445 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site JHS88_11450 IPR007384 Protein of unknown function UCP006257 JHS88_11450 IPR023376 YqcC-like domain JHS88_11450 IPR036814 YqcC-like superfamily JHS88_11475 IPR003791 Protein of unknown function UPF0178 JHS88_11480 IPR011540 AbgT, Proteobacteria JHS88_11480 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT JHS88_11485 IPR000473 Ribosomal protein L36 JHS88_11485 IPR035977 Ribosomal protein L36 superfamily JHS88_11490 IPR042105 Ribosomal protein L31 superfamily JHS88_11490 IPR027493 Ribosomal protein L31 type B JHS88_11490 IPR034704 L28p-like JHS88_11490 IPR002150 Ribosomal protein L31 JHS88_11495 IPR040372 YaeB-like JHS88_11495 IPR023370 TrmO-like, N-terminal domain JHS88_11495 IPR041369 TrmO, C-terminal JHS88_11495 IPR036414 YaeB, N-terminal domain superfamily JHS88_11495 IPR023368 Uncharacterised protein family UPF0066, conserved site JHS88_11495 IPR036413 YaeB-like superfamily JHS88_11500 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily JHS88_11500 IPR033730 Prokaryote proline-tRNA ligase core domain JHS88_11500 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) JHS88_11500 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain JHS88_11500 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 JHS88_11500 IPR006195 Aminoacyl-tRNA synthetase, class II JHS88_11500 IPR004154 Anticodon-binding JHS88_11500 IPR036621 Anticodon-binding domain superfamily JHS88_11500 IPR002316 Proline-tRNA ligase, class IIa JHS88_11500 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type JHS88_11510 IPR009624 Uncharacterised protein family UPF0253 JHS88_11520 IPR000175 Sodium:neurotransmitter symporter JHS88_11520 IPR037272 Sodium:neurotransmitter symporter superfamily JHS88_11535 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal JHS88_11535 IPR023459 Transcription elongation factor GreA/GreB family JHS88_11535 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal JHS88_11535 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily JHS88_11535 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily JHS88_11535 IPR018151 Transcription elongation factor, GreA/GreB, conserved site JHS88_11535 IPR028624 Transcription elongation factor GreA/GreB JHS88_11535 IPR006359 Transcription elongation factor GreA JHS88_11540 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain JHS88_11540 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_11540 IPR018982 RQC domain JHS88_11540 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_11540 IPR010997 HRDC-like superfamily JHS88_11540 IPR001650 Helicase, C-terminal JHS88_11540 IPR014001 Helicase superfamily 1/2, ATP-binding domain JHS88_11540 IPR011545 DEAD/DEAH box helicase domain JHS88_11540 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial JHS88_11540 IPR004589 DNA helicase, ATP-dependent, RecQ type JHS88_11540 IPR002121 HRDC domain JHS88_11545 IPR036775 DNA polymerase, Y-family, little finger domain superfamily JHS88_11545 IPR017961 DNA polymerase, Y-family, little finger domain JHS88_11545 IPR022880 DNA polymerase IV JHS88_11545 IPR024728 DNA polymerase type-Y, HhH motif JHS88_11545 IPR001126 UmuC domain JHS88_11550 IPR017961 DNA polymerase, Y-family, little finger domain JHS88_11550 IPR036775 DNA polymerase, Y-family, little finger domain superfamily JHS88_11550 IPR022880 DNA polymerase IV JHS88_11550 IPR024728 DNA polymerase type-Y, HhH motif JHS88_11550 IPR001126 UmuC domain JHS88_11570 IPR001238 DNA-binding, RecF JHS88_11570 IPR018078 DNA-binding, RecF, conserved site JHS88_11570 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_11570 IPR003395 RecF/RecN/SMC, N-terminal JHS88_11570 IPR042174 DNA-binding RecF, domain 2 JHS88_11575 IPR034739 UvrD/AddA helicase, N-terminal JHS88_11575 IPR000212 DNA helicase, UvrD/REP type JHS88_11575 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_11575 IPR013986 DExx box DNA helicase domain superfamily JHS88_11575 IPR014017 UvrD-like DNA helicase, C-terminal JHS88_11575 IPR005752 ATP-dependent DNA helicase Rep JHS88_11575 IPR014016 UvrD-like helicase, ATP-binding domain JHS88_11635 IPR042159 Flavin-trafficking protein ApbE JHS88_11635 IPR003374 ApbE-like superfamily JHS88_11635 IPR024932 Flavin transferase ApbE JHS88_11640 IPR012675 Beta-grasp domain superfamily JHS88_11640 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain JHS88_11640 IPR036010 2Fe-2S ferredoxin-like superfamily JHS88_11640 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase JHS88_11640 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JHS88_11640 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F JHS88_11640 IPR001433 Oxidoreductase FAD/NAD(P)-binding JHS88_11640 IPR017938 Riboflavin synthase-like beta-barrel JHS88_11640 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain JHS88_11640 IPR017927 FAD-binding domain, ferredoxin reductase-type JHS88_11645 IPR003667 NqrDE/RnfAE JHS88_11645 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E JHS88_11650 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D JHS88_11650 IPR003667 NqrDE/RnfAE JHS88_11655 IPR007329 FMN-binding JHS88_11655 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C JHS88_11660 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B JHS88_11660 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD JHS88_11665 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A JHS88_11665 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain JHS88_11670 IPR002634 BolA protein JHS88_11670 IPR036065 BolA-like superfamily JHS88_11675 IPR007848 Methyltransferase small domain JHS88_11675 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_11675 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD JHS88_11680 IPR012640 Membrane lipoprotein, lipid attachment site JHS88_11680 IPR005619 Uncharacterised protein family, YajG JHS88_11685 IPR029000 Cyclophilin-like domain superfamily JHS88_11685 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site JHS88_11685 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain JHS88_11690 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 JHS88_11690 IPR011701 Major facilitator superfamily JHS88_11690 IPR020846 Major facilitator superfamily domain JHS88_11690 IPR036259 MFS transporter superfamily JHS88_11700 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_11700 IPR013324 RNA polymerase sigma factor, region 3/4-like JHS88_11700 IPR013325 RNA polymerase sigma factor, region 2 JHS88_11700 IPR014284 RNA polymerase sigma-70 like domain JHS88_11700 IPR007627 RNA polymerase sigma-70 region 2 JHS88_11700 IPR007630 RNA polymerase sigma-70 region 4 JHS88_11700 IPR039425 RNA polymerase sigma-70 like JHS88_11715 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like JHS88_11715 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily JHS88_11720 IPR013332 Ketopantoate reductase, N-terminal domain JHS88_11720 IPR013752 Ketopantoate reductase, C-terminal domain JHS88_11720 IPR036291 NAD(P)-binding domain superfamily JHS88_11720 IPR013328 6-phosphogluconate dehydrogenase, domain 2 JHS88_11720 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily JHS88_11720 IPR003710 Ketopantoate reductase ApbA/PanE JHS88_11725 IPR029062 Class I glutamine amidotransferase-like JHS88_11725 IPR006287 Protein/nucleic acid deglycase DJ-1 JHS88_11725 IPR002818 DJ-1/PfpI JHS88_11730 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JHS88_11730 IPR000192 Aminotransferase class V domain JHS88_11730 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA JHS88_11730 IPR010970 Cysteine desulfurase, SufS JHS88_11730 IPR016454 Cysteine desulfurase JHS88_11730 IPR015424 Pyridoxal phosphate-dependent transferase JHS88_11730 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JHS88_11735 IPR029787 Nucleotide cyclase JHS88_11735 IPR033424 Membrane-associated sensor domain JHS88_11735 IPR000160 GGDEF domain JHS88_11740 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE JHS88_11740 IPR003808 Fe-S metabolism associated domain, SufE-like JHS88_11745 IPR000594 THIF-type NAD/FAD binding fold JHS88_11745 IPR035985 Ubiquitin-activating enzyme JHS88_11750 IPR010611 3D domain JHS88_11750 IPR026044 Membrane-bound lytic murein transglycosylase A JHS88_11750 IPR034654 MltA, 3D domain JHS88_11750 IPR005300 Lytic transglycosylase MltA, domain B JHS88_11750 IPR036908 RlpA-like domain superfamily JHS88_11760 IPR010167 Amino-acid N-acetyltransferase JHS88_11760 IPR033719 N-acetylglutamate synthase, kinase-like domain JHS88_11760 IPR000182 GNAT domain JHS88_11760 IPR016181 Acyl-CoA N-acyltransferase JHS88_11760 IPR036393 Acetylglutamate kinase-like superfamily JHS88_11760 IPR001048 Aspartate/glutamate/uridylate kinase JHS88_11770 IPR003593 AAA+ ATPase domain JHS88_11770 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_11770 IPR006344 RecBCD enzyme subunit RecD JHS88_11770 IPR041851 RecBCD enzyme subunit RecD, N-terminal domain JHS88_11770 IPR027785 UvrD-like helicase C-terminal domain JHS88_11775 IPR014017 UvrD-like DNA helicase, C-terminal JHS88_11775 IPR000212 DNA helicase, UvrD/REP type JHS88_11775 IPR011604 Exonuclease, phage-type/RecB, C-terminal JHS88_11775 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type JHS88_11775 IPR004586 RecBCD enzyme subunit RecB JHS88_11775 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_11775 IPR014016 UvrD-like helicase, ATP-binding domain JHS88_11775 IPR034739 UvrD/AddA helicase, N-terminal JHS88_11775 IPR011335 Restriction endonuclease type II-like JHS88_11780 IPR013986 DExx box DNA helicase domain superfamily JHS88_11780 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_11780 IPR006697 RecBCD enzyme subunit RecC JHS88_11780 IPR041500 RecC, C-terminal JHS88_11780 IPR011335 Restriction endonuclease type II-like JHS88_11785 IPR017850 Alkaline-phosphatase-like, core domain superfamily JHS88_11785 IPR000917 Sulfatase, N-terminal JHS88_11785 IPR012159 Inner membrane protein YejM JHS88_11785 IPR024588 Inner membrane protein YejM, N-terminal JHS88_11795 IPR036390 Winged helix DNA-binding domain superfamily JHS88_11795 IPR000847 Transcription regulator HTH, LysR JHS88_11795 IPR005119 LysR, substrate-binding JHS88_11795 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_11800 IPR009813 Uncharacterised protein family YebG JHS88_11800 IPR038627 YebG-like superfamily JHS88_11805 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family JHS88_11805 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria JHS88_11805 IPR001451 Hexapeptide repeat JHS88_11805 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain JHS88_11805 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily JHS88_11805 IPR011004 Trimeric LpxA-like superfamily JHS88_11810 IPR030395 Glycerophosphodiester phosphodiesterase domain JHS88_11810 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily JHS88_11815 IPR005267 Glycerol-3-phosphate transporter JHS88_11815 IPR011701 Major facilitator superfamily JHS88_11815 IPR020846 Major facilitator superfamily domain JHS88_11815 IPR036259 MFS transporter superfamily JHS88_11815 IPR021159 Glycerate/sugar phosphate transporter, conserved site JHS88_11815 IPR000849 Sugar phosphate transporter JHS88_11820 IPR023271 Aquaporin-like JHS88_11820 IPR000425 Major intrinsic protein JHS88_11820 IPR022357 Major intrinsic protein, conserved site JHS88_11825 IPR018484 Carbohydrate kinase, FGGY, N-terminal JHS88_11825 IPR005999 Glycerol kinase JHS88_11825 IPR018483 Carbohydrate kinase, FGGY, conserved site JHS88_11825 IPR018485 Carbohydrate kinase, FGGY, C-terminal JHS88_11825 IPR000577 Carbohydrate kinase, FGGY JHS88_11830 IPR014036 DeoR C-terminal sensor domain JHS88_11830 IPR001034 DeoR-type HTH domain JHS88_11830 IPR037171 NagB/RpiA transferase-like JHS88_11830 IPR018356 Transcription regulator, HTH DeoR-type, conserved site JHS88_11830 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_11830 IPR036390 Winged helix DNA-binding domain superfamily JHS88_11835 IPR006076 FAD dependent oxidoreductase JHS88_11835 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase JHS88_11835 IPR031656 Alpha-glycerophosphate oxidase, C-terminal JHS88_11835 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily JHS88_11835 IPR036188 FAD/NAD(P)-binding domain superfamily JHS88_11840 IPR023714 Zinc transport protein ZntB JHS88_11840 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB JHS88_11855 IPR012340 Nucleic acid-binding, OB-fold JHS88_11855 IPR002547 tRNA-binding domain JHS88_11860 IPR028082 Periplasmic binding protein-like I JHS88_11860 IPR000843 LacI-type HTH domain JHS88_11860 IPR010982 Lambda repressor-like, DNA-binding domain superfamily JHS88_11865 IPR039672 Lactose permease-like JHS88_11865 IPR020846 Major facilitator superfamily domain JHS88_11865 IPR036259 MFS transporter superfamily JHS88_11865 IPR001927 Sodium:galactoside symporter JHS88_11865 IPR018043 Sodium:galactoside symporter, conserved site JHS88_11875 IPR028082 Periplasmic binding protein-like I JHS88_11875 IPR023588 Transcription regulator HTH, PurR JHS88_11875 IPR010982 Lambda repressor-like, DNA-binding domain superfamily JHS88_11875 IPR000843 LacI-type HTH domain JHS88_11880 IPR014718 Glycoside hydrolase-type carbohydrate-binding JHS88_11880 IPR018052 Aldose 1-epimerase, conserved site JHS88_11880 IPR013458 Aldose 1-epimerase, bacterial JHS88_11880 IPR015443 Aldose 1-epimerase JHS88_11880 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase JHS88_11880 IPR011013 Galactose mutarotase-like domain superfamily JHS88_11885 IPR006203 GHMP kinase, ATP-binding, conserved site JHS88_11885 IPR006204 GHMP kinase N-terminal domain JHS88_11885 IPR020568 Ribosomal protein S5 domain 2-type fold JHS88_11885 IPR006206 Mevalonate/galactokinase JHS88_11885 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JHS88_11885 IPR036554 GHMP kinase, C-terminal domain superfamily JHS88_11885 IPR013750 GHMP kinase, C-terminal domain JHS88_11885 IPR022963 Galactokinase, bacterial JHS88_11885 IPR019741 Galactokinase, conserved site JHS88_11885 IPR000705 Galactokinase JHS88_11885 IPR019539 Galactokinase galactose-binding domain JHS88_11890 IPR001937 Galactose-1-phosphate uridyl transferase, class I JHS88_11890 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site JHS88_11890 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal JHS88_11890 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal JHS88_11890 IPR036265 HIT-like superfamily JHS88_11895 IPR036291 NAD(P)-binding domain superfamily JHS88_11895 IPR005886 UDP-glucose 4-epimerase JHS88_11895 IPR016040 NAD(P)-binding domain JHS88_11900 IPR010982 Lambda repressor-like, DNA-binding domain superfamily JHS88_11900 IPR028082 Periplasmic binding protein-like I JHS88_11900 IPR000843 LacI-type HTH domain JHS88_11905 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase JHS88_11905 IPR006103 Glycoside hydrolase family 2, catalytic domain JHS88_11905 IPR023230 Glycoside hydrolase, family 2, conserved site JHS88_11905 IPR006101 Glycoside hydrolase, family 2 JHS88_11905 IPR006104 Glycosyl hydrolases family 2, sugar binding domain JHS88_11905 IPR017853 Glycoside hydrolase superfamily JHS88_11905 IPR013783 Immunoglobulin-like fold JHS88_11905 IPR032312 Beta-galactosidase, domain 4 JHS88_11905 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily JHS88_11905 IPR011013 Galactose mutarotase-like domain superfamily JHS88_11905 IPR008979 Galactose-binding-like domain superfamily JHS88_11905 IPR014718 Glycoside hydrolase-type carbohydrate-binding JHS88_11905 IPR023232 Glycoside hydrolase, family 2, active site JHS88_11905 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich JHS88_11905 IPR004199 Beta galactosidase small chain/ domain 5 JHS88_11910 IPR004375 YhcH/YjgK/YiaL family JHS88_11910 IPR037012 YhcH/YjgK/YiaL superfamily JHS88_11915 IPR002293 Amino acid/polyamine transporter I JHS88_11920 IPR005119 LysR, substrate-binding JHS88_11920 IPR000847 Transcription regulator HTH, LysR JHS88_11920 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_11920 IPR036390 Winged helix DNA-binding domain superfamily JHS88_11955 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_11955 IPR022399 Helicase/secretion neighbourhood ATPase JHS88_11955 IPR001482 Type II/IV secretion system protein JHS88_11985 IPR014004 Transport-associated and nodulation domain, bacteria JHS88_11985 IPR004846 Type II/III secretion system JHS88_11985 IPR032789 Pilus formation protein, N-terminal JHS88_11985 IPR001775 GspD/PilQ family JHS88_11985 IPR007055 BON domain JHS88_12010 IPR016220 Methylphosphotriester-DNA alkyltransferase, AdaA JHS88_12010 IPR018060 DNA binding HTH domain, AraC-type JHS88_12010 IPR009057 Homeobox-like domain superfamily JHS88_12010 IPR004026 Ada DNA repair, metal-binding JHS88_12010 IPR035451 Ada-like domain superfamily JHS88_12010 IPR018062 HTH domain AraC-type, conserved site JHS88_12015 IPR020845 AMP-binding, conserved site JHS88_12015 IPR000873 AMP-dependent synthetase/ligase JHS88_12015 IPR042099 AMP-dependent synthetase-like superfamily JHS88_12025 IPR036390 Winged helix DNA-binding domain superfamily JHS88_12025 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_12025 IPR000847 Transcription regulator HTH, LysR JHS88_12025 IPR005119 LysR, substrate-binding JHS88_12030 IPR041095 Elongation Factor G, domain II JHS88_12030 IPR005517 Translation elongation factor EFG/EF2, domain IV JHS88_12030 IPR009000 Translation protein, beta-barrel domain superfamily JHS88_12030 IPR000795 Transcription factor, GTP-binding domain JHS88_12030 IPR005225 Small GTP-binding protein domain JHS88_12030 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JHS88_12030 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_12030 IPR009022 Elongation factor G, domain III JHS88_12030 IPR004161 Translation elongation factor EFTu-like, domain 2 JHS88_12030 IPR000640 Elongation factor EFG, domain V-like JHS88_12030 IPR035649 EFG, domain V JHS88_12030 IPR035647 EF-G domain III/V-like JHS88_12030 IPR020568 Ribosomal protein S5 domain 2-type fold JHS88_12030 IPR004540 Translation elongation factor EFG/EF2 JHS88_12030 IPR031157 Tr-type G domain, conserved site JHS88_12035 IPR041166 LapB, rubredoxin metal binding domain JHS88_12035 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JHS88_12035 IPR020568 Ribosomal protein S5 domain 2-type fold JHS88_12035 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain JHS88_12035 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_12035 IPR004504 DNA repair protein RadA JHS88_12035 IPR003593 AAA+ ATPase domain JHS88_12045 IPR036412 HAD-like superfamily JHS88_12045 IPR041449 Phosphoserine phosphatase, N-terminal JHS88_12045 IPR023190 Phosphoserine phosphatase, domain 2 JHS88_12045 IPR023214 HAD superfamily JHS88_12055 IPR004402 Purine nucleoside phosphorylase DeoD-type JHS88_12055 IPR035994 Nucleoside phosphorylase superfamily JHS88_12055 IPR018016 Nucleoside phosphorylase, conserved site JHS88_12055 IPR000845 Nucleoside phosphorylase domain JHS88_12060 IPR024052 Phosphopentomutase DeoB cap domain superfamily JHS88_12060 IPR017850 Alkaline-phosphatase-like, core domain superfamily JHS88_12060 IPR006124 Metalloenzyme JHS88_12060 IPR010045 Phosphopentomutase JHS88_12065 IPR000312 Glycosyl transferase, family 3 JHS88_12065 IPR017459 Glycosyl transferase family 3, N-terminal domain JHS88_12065 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily JHS88_12065 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily JHS88_12065 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily JHS88_12065 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal JHS88_12065 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic JHS88_12065 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site JHS88_12065 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase JHS88_12065 IPR013465 Thymidine phosphorylase JHS88_12070 IPR013785 Aldolase-type TIM barrel JHS88_12070 IPR011343 Deoxyribose-phosphate aldolase JHS88_12070 IPR023649 Deoxyribose-phosphate aldolase type II JHS88_12070 IPR002915 DeoC/FbaB/ lacD aldolase JHS88_12075 IPR011657 Concentrative nucleoside transporter C-terminal domain JHS88_12075 IPR002668 Concentrative nucleoside transporter N-terminal domain JHS88_12075 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain JHS88_12075 IPR008276 Concentrative nucleoside transporter JHS88_12075 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial JHS88_12080 IPR001130 TatD family JHS88_12080 IPR032466 Metal-dependent hydrolase JHS88_12080 IPR018228 Deoxyribonuclease, TatD-related, conserved site JHS88_12090 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_12090 IPR031157 Tr-type G domain, conserved site JHS88_12090 IPR032090 Peptide chain release factor 3, C-terminal JHS88_12090 IPR004161 Translation elongation factor EFTu-like, domain 2 JHS88_12090 IPR035647 EF-G domain III/V-like JHS88_12090 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily JHS88_12090 IPR041732 Peptide chain release factor 3, GTP-binding domain JHS88_12090 IPR004548 Peptide chain release factor 3 JHS88_12090 IPR005225 Small GTP-binding protein domain JHS88_12090 IPR009000 Translation protein, beta-barrel domain superfamily JHS88_12090 IPR000795 Transcription factor, GTP-binding domain JHS88_12110 IPR016181 Acyl-CoA N-acyltransferase JHS88_12110 IPR000182 GNAT domain JHS88_12115 IPR039543 Lipid-binding protein POX18/YhbT/NSL-TP1 JHS88_12115 IPR003033 SCP2 sterol-binding domain JHS88_12115 IPR036527 SCP2 sterol-binding domain superfamily JHS88_12115 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT JHS88_12120 IPR000160 GGDEF domain JHS88_12120 IPR029787 Nucleotide cyclase JHS88_12120 IPR005330 MHYT domain JHS88_12120 IPR001633 EAL domain JHS88_12120 IPR035919 EAL domain superfamily JHS88_12125 IPR001539 Peptidase U32 JHS88_12125 IPR036206 Thiamin phosphate synthase superfamily JHS88_12130 IPR001539 Peptidase U32 JHS88_12135 IPR002528 Multi antimicrobial extrusion protein JHS88_12145 IPR019734 Tetratricopeptide repeat JHS88_12145 IPR013105 Tetratricopeptide repeat 2 JHS88_12145 IPR011990 Tetratricopeptide-like helical domain superfamily JHS88_12145 IPR013026 Tetratricopeptide repeat-containing domain JHS88_12145 IPR023605 Lipoprotein NlpI JHS88_12150 IPR036612 K Homology domain, type 1 superfamily JHS88_12150 IPR022967 RNA-binding domain, S1 JHS88_12150 IPR012340 Nucleic acid-binding, OB-fold JHS88_12150 IPR012162 Polyribonucleotide nucleotidyltransferase JHS88_12150 IPR027408 PNPase/RNase PH domain superfamily JHS88_12150 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain JHS88_12150 IPR020568 Ribosomal protein S5 domain 2-type fold JHS88_12150 IPR003029 S1 domain JHS88_12150 IPR004088 K Homology domain, type 1 JHS88_12150 IPR004087 K Homology domain JHS88_12150 IPR001247 Exoribonuclease, phosphorolytic domain 1 JHS88_12150 IPR015847 Exoribonuclease, phosphorolytic domain 2 JHS88_12150 IPR036345 Exoribonuclease, PH domain 2 superfamily JHS88_12155 IPR000589 Ribosomal protein S15 JHS88_12155 IPR009068 S15/NS1, RNA-binding JHS88_12155 IPR005290 Ribosomal protein S15, bacterial-type JHS88_12160 IPR002501 Pseudouridine synthase II, N-terminal JHS88_12160 IPR015947 PUA-like superfamily JHS88_12160 IPR036974 PUA domain superfamily JHS88_12160 IPR014780 tRNA pseudouridine synthase II, TruB JHS88_12160 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal JHS88_12160 IPR032819 tRNA pseudouridylate synthase B, C-terminal JHS88_12160 IPR020103 Pseudouridine synthase, catalytic domain superfamily JHS88_12165 IPR020053 Ribosome-binding factor A, conserved site JHS88_12165 IPR015946 K homology domain-like, alpha/beta JHS88_12165 IPR000238 Ribosome-binding factor A JHS88_12165 IPR023799 Ribosome-binding factor A domain superfamily JHS88_12170 IPR023115 Translation initiation factor IF- 2, domain 3 JHS88_12170 IPR015760 Translation initiation factor IF- 2 JHS88_12170 IPR000178 Translation initiation factor aIF-2, bacterial-like JHS88_12170 IPR000795 Transcription factor, GTP-binding domain JHS88_12170 IPR005225 Small GTP-binding protein domain JHS88_12170 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_12170 IPR006847 Translation initiation factor IF-2, N-terminal JHS88_12170 IPR013575 Initiation factor 2 associated domain, bacterial JHS88_12170 IPR009000 Translation protein, beta-barrel domain superfamily JHS88_12170 IPR036925 Translation initiation factor IF-2, domain 3 superfamily JHS88_12170 IPR009061 Putative DNA-binding domain superfamily JHS88_12175 IPR036555 NusA, N-terminal domain superfamily JHS88_12175 IPR030842 Transcription termination/antitermination protein NusA, bacterial JHS88_12175 IPR012340 Nucleic acid-binding, OB-fold JHS88_12175 IPR009019 K homology domain superfamily, prokaryotic type JHS88_12175 IPR013735 Transcription factor NusA, N-terminal JHS88_12175 IPR015946 K homology domain-like, alpha/beta JHS88_12175 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical JHS88_12175 IPR025249 KH domain, NusA-like JHS88_12175 IPR010214 Transcription termination factor NusA, C-terminal duplication JHS88_12175 IPR010213 Transcription termination factor NusA JHS88_12175 IPR022967 RNA-binding domain, S1 JHS88_12175 IPR003029 S1 domain JHS88_12180 IPR003728 Ribosome maturation factor RimP JHS88_12180 IPR028998 Ribosome maturation factor RimP, C-terminal JHS88_12180 IPR028989 Ribosome maturation factor RimP, N-terminal JHS88_12180 IPR035956 RimP, N-terminal domain superfamily JHS88_12180 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily JHS88_12195 IPR004692 Preprotein translocase SecG subunit JHS88_12200 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily JHS88_12200 IPR006352 Phosphoglucosamine mutase, bacterial type JHS88_12200 IPR005841 Alpha-D-phosphohexomutase superfamily JHS88_12200 IPR016066 Alpha-D-phosphohexomutase, conserved site JHS88_12200 IPR005843 Alpha-D-phosphohexomutase, C-terminal JHS88_12200 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I JHS88_12200 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III JHS88_12200 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II JHS88_12200 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III JHS88_12205 IPR011005 Dihydropteroate synthase-like JHS88_12205 IPR006390 Dihydropteroate synthase JHS88_12205 IPR000489 Pterin-binding domain JHS88_12210 IPR003593 AAA+ ATPase domain JHS88_12210 IPR037219 Peptidase M41-like JHS88_12210 IPR000642 Peptidase M41 JHS88_12210 IPR011546 Peptidase M41, FtsH extracellular JHS88_12210 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_12210 IPR005936 Peptidase, FtsH JHS88_12210 IPR003960 ATPase, AAA-type, conserved site JHS88_12210 IPR003959 ATPase, AAA-type, core JHS88_12210 IPR041569 AAA ATPase, AAA+ lid domain JHS88_12215 IPR015507 Ribosomal RNA large subunit methyltransferase E JHS88_12215 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_12215 IPR002877 Ribosomal RNA methyltransferase FtsJ domain JHS88_12220 IPR001890 RNA-binding, CRM domain JHS88_12220 IPR017924 RNA-binding protein YhbY JHS88_12220 IPR035920 YhbY-like superfamily JHS88_12225 IPR018151 Transcription elongation factor, GreA/GreB, conserved site JHS88_12225 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal JHS88_12225 IPR023459 Transcription elongation factor GreA/GreB family JHS88_12225 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal JHS88_12225 IPR028624 Transcription elongation factor GreA/GreB JHS88_12225 IPR006359 Transcription elongation factor GreA JHS88_12225 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily JHS88_12225 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily JHS88_12230 IPR033900 Porin domain, Gram-negative type JHS88_12230 IPR023614 Porin domain superfamily JHS88_12235 IPR012338 Beta-lactamase/transpeptidase-like JHS88_12235 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C JHS88_12245 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site JHS88_12245 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 JHS88_12245 IPR024088 Tyrosine-tRNA ligase, bacterial-type JHS88_12245 IPR002305 Aminoacyl-tRNA synthetase, class Ic JHS88_12245 IPR002307 Tyrosine-tRNA ligase JHS88_12245 IPR036986 RNA-binding S4 domain superfamily JHS88_12245 IPR002942 RNA-binding S4 domain JHS88_12245 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JHS88_12250 IPR016047 Peptidase M23 JHS88_12250 IPR013731 Opacity-associated protein A, N-terminal JHS88_12250 IPR018392 LysM domain JHS88_12250 IPR011055 Duplicated hybrid motif JHS88_12255 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 JHS88_12255 IPR001036 Acriflavin resistance protein JHS88_12255 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JHS88_12265 IPR035903 HesB-like domain superfamily JHS88_12265 IPR023063 FeS cluster insertion protein ErpA JHS88_12265 IPR017870 FeS cluster insertion, C-terminal, conserved site JHS88_12265 IPR016092 FeS cluster insertion protein JHS88_12265 IPR000361 FeS cluster biogenesis JHS88_12270 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JHS88_12270 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JHS88_12270 IPR015424 Pyridoxal phosphate-dependent transferase JHS88_12270 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase JHS88_12270 IPR005814 Aminotransferase class-III JHS88_12275 IPR002549 Transmembrane protein TqsA-like JHS88_12280 IPR007848 Methyltransferase small domain JHS88_12280 IPR023543 rRNA small subunit methyltransferase C JHS88_12280 IPR013675 Methyltransferase small, N-terminal JHS88_12280 IPR002052 DNA methylase, N-6 adenine-specific, conserved site JHS88_12280 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_12285 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JHS88_12285 IPR005467 Histidine kinase domain JHS88_12285 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_12285 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_12285 IPR011006 CheY-like superfamily JHS88_12285 IPR036641 HPT domain superfamily JHS88_12285 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JHS88_12285 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JHS88_12285 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JHS88_12285 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain JHS88_12285 IPR001789 Signal transduction response regulator, receiver domain JHS88_12290 IPR023765 Solute-binding protein family 5, conserved site JHS88_12290 IPR030678 Peptide/nickel binding protein, MppA-type JHS88_12290 IPR039424 Solute-binding protein family 5 JHS88_12290 IPR000914 Solute-binding protein family 5 domain JHS88_12295 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JHS88_12295 IPR035906 MetI-like superfamily JHS88_12300 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JHS88_12300 IPR025966 Oligopeptide transport permease C-like, N-terminal domain JHS88_12300 IPR035906 MetI-like superfamily JHS88_12305 IPR003439 ABC transporter-like JHS88_12305 IPR003593 AAA+ ATPase domain JHS88_12305 IPR017871 ABC transporter, conserved site JHS88_12305 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_12305 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal JHS88_12310 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal JHS88_12310 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_12310 IPR003593 AAA+ ATPase domain JHS88_12310 IPR003439 ABC transporter-like JHS88_12310 IPR017871 ABC transporter, conserved site JHS88_12320 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type JHS88_12325 IPR025705 Beta-hexosaminidase JHS88_12325 IPR015883 Glycoside hydrolase family 20, catalytic domain JHS88_12325 IPR017853 Glycoside hydrolase superfamily JHS88_12325 IPR029018 Beta-hexosaminidase-like, domain 2 JHS88_12325 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal JHS88_12330 IPR010383 Glycosyl hydrolase 94 JHS88_12330 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily JHS88_12330 IPR037828 N,N'-diacetylchitobiose phosphorylase, N-terminal JHS88_12330 IPR033432 Glycosyl hydrolase 36, catalytic domain JHS88_12330 IPR011013 Galactose mutarotase-like domain superfamily JHS88_12330 IPR012341 Six-hairpin glycosidase-like superfamily JHS88_12330 IPR008928 Six-hairpin glycosidase superfamily JHS88_12330 IPR009342 Putative carbohydrate binding domain JHS88_12335 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I JHS88_12335 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III JHS88_12335 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II JHS88_12335 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III JHS88_12335 IPR005843 Alpha-D-phosphohexomutase, C-terminal JHS88_12335 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily JHS88_12335 IPR016066 Alpha-D-phosphohexomutase, conserved site JHS88_12335 IPR005841 Alpha-D-phosphohexomutase superfamily JHS88_12335 IPR006352 Phosphoglucosamine mutase, bacterial type JHS88_12340 IPR015853 ABC transporter, ferric cation import, FbpC JHS88_12340 IPR008995 Molybdate/tungstate binding, C-terminal JHS88_12340 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_12340 IPR017871 ABC transporter, conserved site JHS88_12340 IPR013611 Transport-associated OB, type 2 JHS88_12340 IPR003593 AAA+ ATPase domain JHS88_12340 IPR003439 ABC transporter-like JHS88_12350 IPR006059 Bacterial extracellular solute-binding protein JHS88_12350 IPR026045 Ferric binding protein JHS88_12355 IPR018047 Ammonium transporter, conserved site JHS88_12355 IPR001905 Ammonium transporter JHS88_12355 IPR024041 Ammonium transporter AmtB-like domain JHS88_12355 IPR029020 Ammonium/urea transporter JHS88_12360 IPR002187 Nitrogen regulatory protein PII JHS88_12360 IPR011322 Nitrogen regulatory PII-like, alpha/beta JHS88_12360 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal JHS88_12360 IPR017918 Nitrogen regulatory protein PII, conserved site JHS88_12360 IPR002332 Nitrogen regulatory protein P-II, urydylation site JHS88_12365 IPR008249 Uncharacterised protein family UPF0231 JHS88_12370 IPR015932 Aconitase, domain 2 JHS88_12370 IPR015929 Aconitase B, swivel JHS88_12370 IPR015933 Aconitase B, HEAT-like domain JHS88_12370 IPR036288 Aconitase B, HEAT-like domain superfamily JHS88_12370 IPR036008 Aconitase, iron-sulfur domain JHS88_12370 IPR018136 Aconitase family, 4Fe-4S cluster binding site JHS88_12370 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel JHS88_12370 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain JHS88_12370 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 JHS88_12370 IPR004406 Aconitase B JHS88_12375 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase JHS88_12375 IPR001423 Lysophospholipase patatin, conserved site JHS88_12375 IPR002641 Patatin-like phospholipase domain JHS88_12380 IPR012338 Beta-lactamase/transpeptidase-like JHS88_12380 IPR001264 Glycosyl transferase, family 51 JHS88_12380 IPR023346 Lysozyme-like domain superfamily JHS88_12380 IPR036950 Penicillin binding protein transglycosylase domain JHS88_12380 IPR001460 Penicillin-binding protein, transpeptidase JHS88_12380 IPR028166 Bifunctional transglycosylase second domain JHS88_12380 IPR011813 Penicillin-binding protein 1B JHS88_12385 IPR011545 DEAD/DEAH box helicase domain JHS88_12385 IPR007502 Helicase-associated domain JHS88_12385 IPR001650 Helicase, C-terminal JHS88_12385 IPR010225 ATP-dependent helicase HrpB JHS88_12385 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_12385 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal JHS88_12385 IPR014001 Helicase superfamily 1/2, ATP-binding domain JHS88_12390 IPR005224 Sugar fermentation stimulation protein JHS88_12390 IPR040452 Sugar fermentation stimulation protein, C-terminal JHS88_12390 IPR041465 SfsA, N-terminal OB domain JHS88_12395 IPR012784 RNA polymerase-binding transcription factor DksA JHS88_12395 IPR037187 DksA, N-terminal domain superfamily JHS88_12395 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria JHS88_12395 IPR000962 Zinc finger, DksA/TraR C4-type JHS88_12395 IPR020458 Zinc finger, DksA/TraR C4-type conserved site JHS88_12400 IPR022380 Glutamyl-Q tRNA(Asp) synthetase JHS88_12400 IPR000924 Glutamyl/glutaminyl-tRNA synthetase JHS88_12400 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain JHS88_12400 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JHS88_12405 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain JHS88_12405 IPR002646 Poly A polymerase, head domain JHS88_12405 IPR010206 Poly(A) polymerase I JHS88_12405 IPR025866 Polymerase A arginine-rich C-terminal domain JHS88_12410 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily JHS88_12410 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK JHS88_12415 IPR003700 Ketopantoate hydroxymethyltransferase JHS88_12415 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily JHS88_12415 IPR040442 Pyruvate kinase-like domain superfamily JHS88_12420 IPR004821 Cytidyltransferase-like domain JHS88_12420 IPR003721 Pantoate-beta-alanine ligase JHS88_12420 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain JHS88_12420 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JHS88_12425 IPR004960 Bacterial lipid A biosynthesis acyltransferase JHS88_12425 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase JHS88_12430 IPR013525 ABC-2 type transporter JHS88_12430 IPR000412 ABC-2 transporter JHS88_12435 IPR003593 AAA+ ATPase domain JHS88_12435 IPR003439 ABC transporter-like JHS88_12435 IPR017871 ABC transporter, conserved site JHS88_12435 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_12440 IPR036513 STAS domain superfamily JHS88_12440 IPR011547 SLC26A/SulP transporter domain JHS88_12440 IPR001902 SLC26A/SulP transporter JHS88_12440 IPR002645 STAS domain JHS88_12445 IPR001765 Carbonic anhydrase JHS88_12445 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site JHS88_12445 IPR036874 Carbonic anhydrase superfamily JHS88_12450 IPR000836 Phosphoribosyltransferase domain JHS88_12450 IPR029057 Phosphoribosyltransferase-like JHS88_12450 IPR005904 Hypoxanthine phosphoribosyl transferase JHS88_12455 IPR009057 Homeobox-like domain superfamily JHS88_12455 IPR001647 DNA-binding HTH domain, TetR-type JHS88_12455 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JHS88_12460 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JHS88_12460 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site JHS88_12460 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily JHS88_12460 IPR023753 FAD/NAD(P)-binding domain JHS88_12460 IPR036188 FAD/NAD(P)-binding domain superfamily JHS88_12460 IPR006258 Dihydrolipoamide dehydrogenase JHS88_12460 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I JHS88_12465 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site JHS88_12465 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain JHS88_12465 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex JHS88_12465 IPR000089 Biotin/lipoyl attachment JHS88_12465 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily JHS88_12465 IPR036625 E3-binding domain superfamily JHS88_12465 IPR004167 Peripheral subunit-binding domain JHS88_12465 IPR011053 Single hybrid motif JHS88_12470 IPR005474 Transketolase, N-terminal JHS88_12470 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II JHS88_12470 IPR041621 Pyruvate dehydrogenase E1 component, middle domain JHS88_12470 IPR004660 Pyruvate dehydrogenase E1 component JHS88_12470 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal JHS88_12470 IPR029061 Thiamin diphosphate-binding fold JHS88_12475 IPR036390 Winged helix DNA-binding domain superfamily JHS88_12475 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_12475 IPR000524 Transcription regulator HTH, GntR JHS88_12475 IPR008920 Transcription regulator FadR/GntR, C-terminal JHS88_12475 IPR011711 GntR, C-terminal JHS88_12480 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily JHS88_12480 IPR002502 N-acetylmuramoyl-L-alanine amidase domain JHS88_12485 IPR013785 Aldolase-type TIM barrel JHS88_12485 IPR004393 Nicotinate-nucleotide pyrophosphorylase JHS88_12485 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD JHS88_12485 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal JHS88_12485 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily JHS88_12485 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal JHS88_12485 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal JHS88_12490 IPR012902 Prokaryotic N-terminal methylation site JHS88_12490 IPR001082 Fimbrial protein pilin JHS88_12495 IPR042181 Type II secretion system, protein E, N-terminal JHS88_12495 IPR007831 General secretory system II, protein E, N-terminal JHS88_12495 IPR013374 ATPase, type IV, pilus assembly, PilB JHS88_12495 IPR001482 Type II/IV secretion system protein JHS88_12495 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_12495 IPR037257 General secretory system II, protein E, N-terminal superfamily JHS88_12500 IPR003004 GspF/PilC family JHS88_12500 IPR001992 Type II secretion system conserved site JHS88_12500 IPR018076 Type II secretion system F domain JHS88_12500 IPR042094 Type II secretion system F domain superfamily JHS88_12505 IPR010627 Peptidase A24A, N-terminal JHS88_12505 IPR014032 Peptidase A24A, prepilin type IV, bacterial JHS88_12505 IPR000045 Prepilin type IV endopeptidase, peptidase domain JHS88_12510 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_12510 IPR001977 Dephospho-CoA kinase JHS88_12515 IPR027462 Z ring-associated protein D, C-terminal JHS88_12515 IPR036268 ZapD domain superfamily JHS88_12515 IPR009777 Cell division protein ZapD JHS88_12520 IPR005584 DNA gyrase inhibitor YacG JHS88_12520 IPR013088 Zinc finger, NHR/GATA-type JHS88_12525 IPR038657 Ribosomal protein L19 superfamily JHS88_12525 IPR001857 Ribosomal protein L19 JHS88_12525 IPR018257 Ribosomal protein L19, conserved site JHS88_12525 IPR008991 Translation protein SH3-like domain superfamily JHS88_12530 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain JHS88_12530 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JHS88_12530 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal JHS88_12530 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria JHS88_12530 IPR029028 Alpha/beta knot methyltransferases JHS88_12535 IPR011961 16S rRNA processing protein RimM JHS88_12535 IPR027275 PRC-barrel domain JHS88_12535 IPR011033 PRC-barrel-like superfamily JHS88_12535 IPR002676 RimM, N-terminal JHS88_12535 IPR036976 RimM, N-terminal domain superfamily JHS88_12535 IPR009000 Translation protein, beta-barrel domain superfamily JHS88_12540 IPR020592 Ribosomal protein S16, conserved site JHS88_12540 IPR000307 Ribosomal protein S16 JHS88_12540 IPR023803 Ribosomal protein S16 domain superfamily JHS88_12545 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain JHS88_12545 IPR022941 Signal recognition particle, SRP54 subunit JHS88_12545 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily JHS88_12545 IPR013822 Signal recognition particle SRP54, helical bundle JHS88_12545 IPR004125 Signal recognition particle, SRP54 subunit, M-domain JHS88_12545 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily JHS88_12545 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_12545 IPR003593 AAA+ ATPase domain JHS88_12545 IPR004780 Signal recognition particle protein JHS88_12550 IPR002541 Cytochrome c assembly protein JHS88_12555 IPR005170 Transporter-associated domain JHS88_12555 IPR016169 FAD-binding, type PCMH, subdomain 2 JHS88_12555 IPR036318 FAD-binding, type PCMH-like superfamily JHS88_12555 IPR002550 CNNM, transmembrane domain JHS88_12555 IPR000644 CBS domain JHS88_12560 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like JHS88_12560 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily JHS88_12560 IPR003815 S-ribosylhomocysteinase (LuxS) JHS88_12570 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain JHS88_12570 IPR007370 Glutamate--cysteine ligase JHS88_12570 IPR006334 Glutamate--cysteine ligase, monofunctional JHS88_12575 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like JHS88_12575 IPR011765 Peptidase M16, N-terminal JHS88_12575 IPR001431 Peptidase M16, zinc-binding site JHS88_12575 IPR007863 Peptidase M16, C-terminal JHS88_12580 IPR032816 SNARE associated Golgi protein JHS88_12585 IPR036291 NAD(P)-binding domain superfamily JHS88_12585 IPR013149 Alcohol dehydrogenase, C-terminal JHS88_12585 IPR013154 Alcohol dehydrogenase, N-terminal JHS88_12585 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site JHS88_12585 IPR011032 GroES-like superfamily JHS88_12585 IPR020843 Polyketide synthase, enoylreductase domain JHS88_12590 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit JHS88_12595 IPR013785 Aldolase-type TIM barrel JHS88_12595 IPR001882 Biotin-binding site JHS88_12595 IPR000089 Biotin/lipoyl attachment JHS88_12595 IPR003379 Carboxylase, conserved domain JHS88_12595 IPR005776 Oxaloacetate decarboxylase, alpha subunit JHS88_12595 IPR000891 Pyruvate carboxyltransferase JHS88_12595 IPR011053 Single hybrid motif JHS88_12600 IPR005899 Sodium ion-translocating decarboxylase JHS88_12600 IPR023424 Oxaloacetate decarboxylase gamma chain, probable JHS88_12655 IPR003751 Translational regulator CsrA JHS88_12655 IPR036107 Carbon storage regulator superfamily JHS88_12660 IPR018042 Aspartate kinase, conserved site JHS88_12660 IPR041740 Aspartokinase catalytic domain JHS88_12660 IPR001341 Aspartate kinase JHS88_12660 IPR027795 CASTOR, ACT domain JHS88_12660 IPR005260 Aspartate kinase, monofunctional class JHS88_12660 IPR036393 Acetylglutamate kinase-like superfamily JHS88_12660 IPR002912 ACT domain JHS88_12660 IPR001048 Aspartate/glutamate/uridylate kinase JHS88_12665 IPR012947 Threonyl/alanyl tRNA synthetase, SAD JHS88_12665 IPR009000 Translation protein, beta-barrel domain superfamily JHS88_12665 IPR003156 DHHA1 domain JHS88_12665 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria JHS88_12665 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily JHS88_12665 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain JHS88_12665 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily JHS88_12665 IPR002318 Alanine-tRNA ligase, class IIc JHS88_12665 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal JHS88_12670 IPR003783 Regulatory protein RecX JHS88_12670 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_12675 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain JHS88_12675 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface JHS88_12675 IPR003593 AAA+ ATPase domain JHS88_12675 IPR013765 DNA recombination and repair protein RecA JHS88_12675 IPR020584 DNA recombination/repair protein RecA, conserved site JHS88_12675 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_12675 IPR023400 DNA recombination and repair protein RecA, C-terminal JHS88_12680 IPR008136 CinA, C-terminal JHS88_12680 IPR036653 CinA-like, C-terminal JHS88_12685 IPR036678 MutS, connector domain superfamily JHS88_12685 IPR007860 DNA mismatch repair protein MutS, connector domain JHS88_12685 IPR036187 DNA mismatch repair protein MutS, core domain superfamily JHS88_12685 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_12685 IPR007696 DNA mismatch repair protein MutS, core JHS88_12685 IPR016151 DNA mismatch repair protein MutS, N-terminal JHS88_12685 IPR000432 DNA mismatch repair protein MutS, C-terminal JHS88_12685 IPR005748 DNA mismatch repair protein MutS JHS88_12685 IPR007695 DNA mismatch repair protein MutS-like, N-terminal JHS88_12685 IPR007861 DNA mismatch repair protein MutS, clamp JHS88_12685 IPR017261 DNA mismatch repair protein MutS/MSH JHS88_12690 IPR012761 RNA polymerase sigma factor RpoS JHS88_12690 IPR013324 RNA polymerase sigma factor, region 3/4-like JHS88_12690 IPR013325 RNA polymerase sigma factor, region 2 JHS88_12690 IPR007630 RNA polymerase sigma-70 region 4 JHS88_12690 IPR007624 RNA polymerase sigma-70 region 3 JHS88_12690 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_12690 IPR009042 RNA polymerase sigma-70 region 1.2 JHS88_12690 IPR000943 RNA polymerase sigma-70 JHS88_12690 IPR014284 RNA polymerase sigma-70 like domain JHS88_12690 IPR007627 RNA polymerase sigma-70 region 2 JHS88_12695 IPR016047 Peptidase M23 JHS88_12695 IPR036779 LysM domain superfamily JHS88_12695 IPR018392 LysM domain JHS88_12695 IPR011055 Duplicated hybrid motif JHS88_12700 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_12700 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase JHS88_12705 IPR030048 Survival protein SurE JHS88_12705 IPR002828 Survival protein SurE-like phosphatase/nucleotidase JHS88_12705 IPR036523 SurE-like phosphatase/nucleotidase superfamily JHS88_12710 IPR042214 Pseudouridine synthase, TruD, catalytic domain JHS88_12710 IPR020103 Pseudouridine synthase, catalytic domain superfamily JHS88_12710 IPR001656 Pseudouridine synthase, TruD JHS88_12710 IPR020119 Pseudouridine synthase TruD, conserved site JHS88_12710 IPR011760 Pseudouridine synthase, TruD, insertion domain JHS88_12715 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily JHS88_12715 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site JHS88_12715 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase JHS88_12720 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JHS88_12720 IPR034683 Cytidylyltransferase IspD/TarI JHS88_12720 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site JHS88_12720 IPR029044 Nucleotide-diphospho-sugar transferases JHS88_12725 IPR023081 Cell division protein FtsB JHS88_12725 IPR007060 Septum formation initiator FtsL/DivIC JHS88_12730 IPR020809 Enolase, conserved site JHS88_12730 IPR000941 Enolase JHS88_12730 IPR036849 Enolase-like, C-terminal domain superfamily JHS88_12730 IPR029017 Enolase-like, N-terminal JHS88_12730 IPR020810 Enolase, C-terminal TIM barrel domain JHS88_12730 IPR020811 Enolase, N-terminal JHS88_12735 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_12735 IPR033828 CTP synthase GATase domain JHS88_12735 IPR017926 Glutamine amidotransferase JHS88_12735 IPR004468 CTP synthase JHS88_12735 IPR029062 Class I glutamine amidotransferase-like JHS88_12735 IPR017456 CTP synthase, N-terminal JHS88_12740 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core JHS88_12740 IPR011551 NTP pyrophosphohydrolase MazG JHS88_12745 IPR012676 TGS-like JHS88_12745 IPR007685 RelA/SpoT JHS88_12745 IPR004095 TGS JHS88_12745 IPR004811 RelA/SpoT family JHS88_12745 IPR033655 RelA, TGS domain JHS88_12745 IPR012675 Beta-grasp domain superfamily JHS88_12745 IPR002912 ACT domain JHS88_12745 IPR003607 HD/PDEase domain JHS88_12750 IPR002792 TRAM domain JHS88_12750 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_12750 IPR030391 RNA methyltransferase TrmA, conserved site JHS88_12750 IPR010280 (Uracil-5)-methyltransferase family JHS88_12750 IPR012340 Nucleic acid-binding, OB-fold JHS88_12750 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD JHS88_12750 IPR030390 RNA methyltransferase TrmA, active site JHS88_12755 IPR019247 Histidine kinase BarA, N-terminal JHS88_12755 IPR011006 CheY-like superfamily JHS88_12755 IPR003660 HAMP domain JHS88_12755 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_12755 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_12755 IPR005467 Histidine kinase domain JHS88_12755 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JHS88_12755 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JHS88_12755 IPR036641 HPT domain superfamily JHS88_12755 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JHS88_12755 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain JHS88_12755 IPR001789 Signal transduction response regulator, receiver domain JHS88_12760 IPR037143 4'-phosphopantetheinyl transferase domain superfamily JHS88_12760 IPR004568 Phosphopantetheine-protein transferase domain JHS88_12760 IPR002582 Holo-[acyl carrier protein] synthase JHS88_12760 IPR008278 4'-phosphopantetheinyl transferase domain JHS88_12765 IPR036130 Pyridoxine 5'-phosphate synthase JHS88_12765 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ JHS88_12765 IPR013785 Aldolase-type TIM barrel JHS88_12770 IPR037278 ARFGAP/RecO-like zinc finger JHS88_12770 IPR022572 DNA replication/recombination mediator RecO, N-terminal JHS88_12770 IPR012340 Nucleic acid-binding, OB-fold JHS88_12770 IPR003717 Recombination protein O, RecO JHS88_12775 IPR005225 Small GTP-binding protein domain JHS88_12775 IPR030388 Era-type guanine nucleotide-binding (G) domain JHS88_12775 IPR005662 GTP-binding protein Era JHS88_12775 IPR006073 GTP binding domain JHS88_12775 IPR015946 K homology domain-like, alpha/beta JHS88_12775 IPR004044 K Homology domain, type 2 JHS88_12775 IPR009019 K homology domain superfamily, prokaryotic type JHS88_12775 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_12780 IPR036389 Ribonuclease III, endonuclease domain superfamily JHS88_12780 IPR000999 Ribonuclease III domain JHS88_12780 IPR011907 Ribonuclease III JHS88_12780 IPR014720 Double-stranded RNA-binding domain JHS88_12785 IPR019756 Peptidase S26A, signal peptidase I, serine active site JHS88_12785 IPR019757 Peptidase S26A, signal peptidase I, lysine active site JHS88_12785 IPR019533 Peptidase S26 JHS88_12785 IPR000223 Peptidase S26A, signal peptidase I JHS88_12785 IPR036286 LexA/Signal peptidase-like superfamily JHS88_12785 IPR019758 Peptidase S26A, signal peptidase I, conserved site JHS88_12790 IPR009000 Translation protein, beta-barrel domain superfamily JHS88_12790 IPR000795 Transcription factor, GTP-binding domain JHS88_12790 IPR005225 Small GTP-binding protein domain JHS88_12790 IPR035654 Elongation factor 4, domain IV JHS88_12790 IPR013842 GTP-binding protein LepA, C-terminal JHS88_12790 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_12790 IPR031157 Tr-type G domain, conserved site JHS88_12790 IPR004161 Translation elongation factor EFTu-like, domain 2 JHS88_12790 IPR000640 Elongation factor EFG, domain V-like JHS88_12790 IPR035647 EF-G domain III/V-like JHS88_12790 IPR006297 Elongation factor 4 JHS88_12790 IPR038363 LepA, C-terminal domain superfamily JHS88_12795 IPR026268 Protein RseC JHS88_12795 IPR007359 Positive regulator of sigma(E), RseC/MucC JHS88_12800 IPR033436 MucB/RseB, C-terminal JHS88_12800 IPR038484 MucB/RseB, C-terminal domain superfamily JHS88_12800 IPR033434 MucB/RseB, N-terminal JHS88_12800 IPR005588 MucB/RseB JHS88_12805 IPR026279 Sigma-E factor negative regulatory protein RseA JHS88_12805 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily JHS88_12805 IPR005573 Anti sigma-E protein RseA, C-terminal JHS88_12805 IPR005572 Anti sigma-E protein RseA, N-terminal JHS88_12810 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_12810 IPR013325 RNA polymerase sigma factor, region 2 JHS88_12810 IPR014286 RNA polymerase sigma-70 RpoE type JHS88_12810 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 JHS88_12810 IPR013324 RNA polymerase sigma factor, region 3/4-like JHS88_12810 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site JHS88_12810 IPR014284 RNA polymerase sigma-70 like domain JHS88_12810 IPR039425 RNA polymerase sigma-70 like JHS88_12810 IPR007627 RNA polymerase sigma-70 region 2 JHS88_12815 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain JHS88_12815 IPR036188 FAD/NAD(P)-binding domain superfamily JHS88_12815 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily JHS88_12815 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal JHS88_12815 IPR005288 L-aspartate oxidase JHS88_12815 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily JHS88_12820 IPR005631 Flavinator of succinate dehydrogenase JHS88_12820 IPR036714 Flavinator of succinate dehydrogenase superfamily JHS88_12825 IPR017703 YgfZ/GcvT conserved site JHS88_12825 IPR023758 tRNA-modifying protein YgfZ JHS88_12825 IPR006222 Aminomethyltransferase, folate-binding domain JHS88_12825 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal JHS88_12840 IPR002938 FAD-binding domain JHS88_12840 IPR036188 FAD/NAD(P)-binding domain superfamily JHS88_12840 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site JHS88_12840 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 JHS88_12845 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase JHS88_12845 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site JHS88_12845 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 JHS88_12845 IPR002938 FAD-binding domain JHS88_12845 IPR036188 FAD/NAD(P)-binding domain superfamily JHS88_12850 IPR011978 Uncharacterised protein family UPF0149 JHS88_12850 IPR036255 YgfB-like superfamily JHS88_12855 IPR007838 Cell division protein ZapA-like JHS88_12855 IPR036192 Cell division protein ZapA-like superfamily JHS88_12855 IPR023771 Cell division protein ZapA, eubacteria JHS88_12865 IPR037171 NagB/RpiA transferase-like JHS88_12865 IPR002698 5-formyltetrahydrofolate cyclo-ligase JHS88_12865 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily JHS88_12870 IPR004788 Ribose 5-phosphate isomerase, type A JHS88_12870 IPR037171 NagB/RpiA transferase-like JHS88_12870 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup JHS88_12875 IPR002912 ACT domain JHS88_12875 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JHS88_12875 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site JHS88_12875 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 JHS88_12875 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain JHS88_12875 IPR036291 NAD(P)-binding domain superfamily JHS88_12880 IPR007497 Protein of unknown function DUF541 JHS88_12885 IPR017685 HTH-type transcriptional regulator ArgP JHS88_12885 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria JHS88_12885 IPR005119 LysR, substrate-binding JHS88_12885 IPR000847 Transcription regulator HTH, LysR JHS88_12885 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_12885 IPR036390 Winged helix DNA-binding domain superfamily JHS88_12890 IPR001123 Amino acid exporter protein, LeuE-type JHS88_12890 IPR023445 Arginine exporter protein ArgO, enterobacteria JHS88_12890 IPR004777 L-lysine exporter/arginine exporter JHS88_12895 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain JHS88_12895 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily JHS88_12900 IPR008910 Conserved TM helix JHS88_12900 IPR023408 Mechanosensitive ion channel MscS domain superfamily JHS88_12900 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 JHS88_12900 IPR010920 LSM domain superfamily JHS88_12900 IPR011066 Mechanosensitive ion channel MscS, C-terminal JHS88_12900 IPR006685 Mechanosensitive ion channel MscS JHS88_12900 IPR006686 Mechanosensitive ion channel MscS, conserved site JHS88_12905 IPR013785 Aldolase-type TIM barrel JHS88_12905 IPR000771 Fructose-bisphosphate aldolase, class-II JHS88_12905 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype JHS88_12910 IPR036043 Phosphoglycerate kinase superfamily JHS88_12910 IPR015824 Phosphoglycerate kinase, N-terminal JHS88_12910 IPR001576 Phosphoglycerate kinase JHS88_12910 IPR015911 Phosphoglycerate kinase, conserved site JHS88_12915 IPR006422 D-erythrose-4-phosphate dehydrogenase JHS88_12915 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family JHS88_12915 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain JHS88_12915 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain JHS88_12915 IPR036291 NAD(P)-binding domain superfamily JHS88_12920 IPR010917 TonB-dependent receptor, conserved site JHS88_12920 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily JHS88_12920 IPR010916 TonB box, conserved site JHS88_12920 IPR012910 TonB-dependent receptor, plug domain JHS88_12920 IPR037066 TonB-dependent receptor, plug domain superfamily JHS88_12920 IPR039426 Vitamin B12 transporter BtuB-like JHS88_12920 IPR000531 TonB-dependent receptor-like, beta-barrel JHS88_12925 IPR005119 LysR, substrate-binding JHS88_12925 IPR000847 Transcription regulator HTH, LysR JHS88_12925 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_12925 IPR036390 Winged helix DNA-binding domain superfamily JHS88_12930 IPR033247 Transketolase family JHS88_12930 IPR029061 Thiamin diphosphate-binding fold JHS88_12930 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II JHS88_12930 IPR005475 Transketolase-like, pyrimidine-binding domain JHS88_12930 IPR005478 Transketolase, bacterial-like JHS88_12930 IPR020826 Transketolase binding site JHS88_12930 IPR033248 Transketolase, C-terminal domain JHS88_12930 IPR005474 Transketolase, N-terminal JHS88_12935 IPR022631 S-adenosylmethionine synthetase, conserved site JHS88_12935 IPR022630 S-adenosylmethionine synthetase, C-terminal JHS88_12935 IPR022636 S-adenosylmethionine synthetase superfamily JHS88_12935 IPR022628 S-adenosylmethionine synthetase, N-terminal JHS88_12935 IPR022629 S-adenosylmethionine synthetase, central domain JHS88_12935 IPR002133 S-adenosylmethionine synthetase JHS88_12945 IPR006640 SprT-like JHS88_12945 IPR035240 SprT-like, zinc ribbon domain JHS88_12945 IPR023483 Uncharacterised protein family SprT JHS88_12950 IPR007346 Endonuclease I JHS88_12955 IPR006700 Ribosomal RNA small subunit methyltransferase E JHS88_12955 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JHS88_12955 IPR029028 Alpha/beta knot methyltransferases JHS88_12955 IPR015947 PUA-like superfamily JHS88_12960 IPR011761 ATP-grasp fold JHS88_12960 IPR013815 ATP-grasp fold, subdomain 1 JHS88_12960 IPR006284 Glutathione synthetase, prokaryotic JHS88_12960 IPR004218 Prokaryotic glutathione synthetase, ATP-binding JHS88_12960 IPR004215 Prokaryotic glutathione synthetase, N-terminal JHS88_12960 IPR016185 Pre-ATP-grasp domain superfamily JHS88_12965 IPR003774 Protein of unknown function UPF0301 JHS88_12970 IPR005227 Putative pre-16S rRNA nuclease JHS88_12970 IPR037027 YqgF/RNase H-like domain superfamily JHS88_12970 IPR006641 YqgF/RNase H-like domain JHS88_12970 IPR012337 Ribonuclease H-like superfamily JHS88_12975 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_12975 IPR006321 Pilus retraction protein PilT JHS88_12975 IPR001482 Type II/IV secretion system protein JHS88_12980 IPR003593 AAA+ ATPase domain JHS88_12980 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_12980 IPR006321 Pilus retraction protein PilT JHS88_12980 IPR001482 Type II/IV secretion system protein JHS88_12985 IPR011078 Pyridoxal phosphate homeostasis protein JHS88_12985 IPR001608 Alanine racemase, N-terminal JHS88_12985 IPR029066 PLP-binding barrel JHS88_12990 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily JHS88_12990 IPR036291 NAD(P)-binding domain superfamily JHS88_12990 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal JHS88_12990 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain JHS88_12990 IPR000304 Pyrroline-5-carboxylate reductase JHS88_12995 IPR003425 CCB3/YggT JHS88_13000 IPR003746 Protein of unknown function DUF167 JHS88_13000 IPR005228 Conserved hypothetical protein CHP00251 JHS88_13000 IPR036591 YggU-like superfamily JHS88_13010 IPR002637 Ham1-like protein JHS88_13010 IPR029001 Inosine triphosphate pyrophosphatase-like JHS88_13010 IPR020922 dITP/XTP pyrophosphatase JHS88_13015 IPR034505 Anaerobic coproporphyrinogen-III oxidase JHS88_13015 IPR006638 Elp3/MiaB/NifB JHS88_13015 IPR010723 HemN, C-terminal JHS88_13015 IPR004559 Heme chaperone HemW-like JHS88_13015 IPR007197 Radical SAM JHS88_13015 IPR023404 Radical SAM, alpha/beta horseshoe JHS88_13020 IPR012338 Beta-lactamase/transpeptidase-like JHS88_13020 IPR015868 Glutaminase JHS88_13025 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site JHS88_13025 IPR012327 D12 class N6 adenine-specific DNA methyltransferase JHS88_13025 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_13030 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_13030 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type JHS88_13035 IPR029119 MutY, C-terminal JHS88_13035 IPR004036 Endonuclease III-like, conserved site-2 JHS88_13035 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal JHS88_13035 IPR015797 NUDIX hydrolase-like domain superfamily JHS88_13035 IPR000445 Helix-hairpin-helix motif JHS88_13035 IPR011257 DNA glycosylase JHS88_13035 IPR004035 Endonuclease III, iron-sulphur binding site JHS88_13035 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif JHS88_13035 IPR005760 A/G-specific adenine glycosylase MutY JHS88_13035 IPR003265 HhH-GPD domain JHS88_13040 IPR007457 Fe(II) trafficking protein YggX JHS88_13040 IPR036766 Fe(II) trafficking protein YggX superfamily JHS88_13045 IPR000189 Prokaryotic transglycosylase, active site JHS88_13045 IPR023346 Lysozyme-like domain superfamily JHS88_13045 IPR023664 Murein transglycosylase-C JHS88_13045 IPR024570 Murein transglycosylase-C, N-terminal JHS88_13045 IPR008258 Transglycosylase SLT domain 1 JHS88_13085 IPR033480 Single Cache domain 2 JHS88_13085 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JHS88_13085 IPR004090 Chemotaxis methyl-accepting receptor JHS88_13085 IPR003660 HAMP domain JHS88_13115 IPR029510 Aldehyde dehydrogenase, glutamic acid active site JHS88_13115 IPR016162 Aldehyde dehydrogenase, N-terminal JHS88_13115 IPR015590 Aldehyde dehydrogenase domain JHS88_13115 IPR010102 Succinate semialdehyde dehydrogenase JHS88_13115 IPR016163 Aldehyde dehydrogenase, C-terminal JHS88_13115 IPR016161 Aldehyde/histidinol dehydrogenase JHS88_13115 IPR016160 Aldehyde dehydrogenase, cysteine active site JHS88_13160 IPR037522 HD-GYP domain JHS88_13160 IPR003607 HD/PDEase domain JHS88_13160 IPR011006 CheY-like superfamily JHS88_13160 IPR001789 Signal transduction response regulator, receiver domain JHS88_13165 IPR000843 LacI-type HTH domain JHS88_13165 IPR010982 Lambda repressor-like, DNA-binding domain superfamily JHS88_13165 IPR001761 Periplasmic binding protein/LacI sugar binding domain JHS88_13165 IPR028082 Periplasmic binding protein-like I JHS88_13165 IPR023588 Transcription regulator HTH, PurR JHS88_13170 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria JHS88_13170 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel JHS88_13170 IPR006879 Carbohydrate deacetylase YdjC-like JHS88_13175 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal JHS88_13175 IPR036291 NAD(P)-binding domain superfamily JHS88_13175 IPR019802 Glycoside hydrolase, family 4, conserved site JHS88_13175 IPR001088 Glycoside hydrolase, family 4 JHS88_13175 IPR022616 Glycosyl hydrolase, family 4, C-terminal JHS88_13180 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit JHS88_13180 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily JHS88_13185 IPR004796 Phosphotransferase system, cellobiose-type IIC component JHS88_13185 IPR004501 Phosphotransferase system, EIIC component, type 3 JHS88_13185 IPR003352 Phosphotransferase system, EIIC JHS88_13190 IPR013012 Phosphotransferase system, EIIB component, type 3 JHS88_13190 IPR036095 PTS system IIB component-like superfamily JHS88_13190 IPR003501 Phosphotransferase system, EIIB component, type 2/3 JHS88_13195 IPR003610 Carbohydrate-binding module family 5/12 JHS88_13195 IPR036573 Carbohydrate-binding module superfamily 5/12 JHS88_13195 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel JHS88_13195 IPR002509 NodB homology domain JHS88_13205 IPR020904 Short-chain dehydrogenase/reductase, conserved site JHS88_13205 IPR036291 NAD(P)-binding domain superfamily JHS88_13205 IPR002347 Short-chain dehydrogenase/reductase SDR JHS88_13210 IPR018723 Protein of unknown function DUF2254, membrane JHS88_13220 IPR005495 Permease LptG/LptF-related JHS88_13220 IPR030923 LPS export ABC transporter permease LptG JHS88_13225 IPR030922 LPS export ABC transporter permease LptF JHS88_13225 IPR005495 Permease LptG/LptF-related JHS88_13230 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B JHS88_13230 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal JHS88_13230 IPR023042 Peptidase M17, leucine aminopeptidase JHS88_13230 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal JHS88_13235 IPR036768 DNA polymerase III subunit chi superfamily JHS88_13235 IPR007459 DNA polymerase III chi subunit, HolC JHS88_13240 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm JHS88_13240 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain JHS88_13240 IPR002303 Valine-tRNA ligase JHS88_13240 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily JHS88_13240 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding JHS88_13240 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm JHS88_13240 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site JHS88_13240 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding JHS88_13240 IPR002300 Aminoacyl-tRNA synthetase, class Ia JHS88_13240 IPR033705 Valyl tRNA synthetase, anticodon-binding domain JHS88_13240 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JHS88_13250 IPR000182 GNAT domain JHS88_13250 IPR016181 Acyl-CoA N-acyltransferase JHS88_13260 IPR016716 Regulator of ribonuclease activity B JHS88_13260 IPR036701 RraB-like superfamily JHS88_13260 IPR009671 Regulator of ribonuclease activity B domain JHS88_13265 IPR003876 Arginine deiminase JHS88_13270 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding JHS88_13270 IPR006130 Aspartate/ornithine carbamoyltransferase JHS88_13270 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily JHS88_13270 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain JHS88_13270 IPR002292 Ornithine/putrescine carbamoyltransferase JHS88_13270 IPR024904 Ornithine carbamoyltransferase JHS88_13280 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain JHS88_13280 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily JHS88_13280 IPR006130 Aspartate/ornithine carbamoyltransferase JHS88_13280 IPR002082 Aspartate carbamoyltransferase JHS88_13280 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding JHS88_13285 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal JHS88_13285 IPR002801 Aspartate transcarbamylase regulatory subunit JHS88_13285 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal JHS88_13285 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily JHS88_13285 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily JHS88_13290 IPR006056 RidA family JHS88_13290 IPR019897 RidA, conserved site JHS88_13290 IPR035959 RutC-like superfamily JHS88_13290 IPR006175 YjgF/YER057c/UK114 family JHS88_13295 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase JHS88_13295 IPR002123 Phospholipid/glycerol acyltransferase JHS88_13300 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta JHS88_13300 IPR036968 Enolpyruvate transferase domain superfamily JHS88_13300 IPR001986 Enolpyruvate transferase domain JHS88_13300 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase JHS88_13305 IPR036065 BolA-like superfamily JHS88_13305 IPR002634 BolA protein JHS88_13315 IPR042245 Tgt2/MlaC superfamily JHS88_13315 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC JHS88_13320 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD JHS88_13320 IPR003399 Mce/MlaD JHS88_13325 IPR030802 ABC transporter permease MalE JHS88_13325 IPR003453 ABC transport permease subunit MlaE, Proteobacteria JHS88_13330 IPR003593 AAA+ ATPase domain JHS88_13330 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_13330 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl JHS88_13330 IPR017871 ABC transporter, conserved site JHS88_13330 IPR003439 ABC transporter-like JHS88_13335 IPR004481 Sodium/potassium/calcium exchanger JHS88_13335 IPR004837 Sodium/calcium exchanger membrane region JHS88_13340 IPR000644 CBS domain JHS88_13340 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type JHS88_13340 IPR035474 KpsF-like, SIS domain JHS88_13340 IPR001347 Sugar isomerase (SIS) JHS88_13350 IPR014340 Lipopolysaccharide export system protein LptA JHS88_13350 IPR005653 Organic solvent tolerance-like, N-terminal JHS88_13355 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal JHS88_13355 IPR003593 AAA+ ATPase domain JHS88_13355 IPR003439 ABC transporter-like JHS88_13355 IPR017871 ABC transporter, conserved site JHS88_13355 IPR030921 LPS export ABC transporter, ATP-binding protein LptB JHS88_13355 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_13360 IPR007046 RNA polymerase sigma factor 54, core-binding domain JHS88_13360 IPR000394 RNA polymerase sigma factor 54 JHS88_13360 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily JHS88_13360 IPR007634 RNA polymerase sigma factor 54, DNA-binding JHS88_13365 IPR003489 Ribosome hibernation promoting factor/RaiA JHS88_13365 IPR036567 Ribosome hibernation promotion factor-like JHS88_13370 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN JHS88_13370 IPR016152 Phosphotransferase/anion transporter JHS88_13370 IPR002178 PTS EIIA type-2 domain JHS88_13375 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_13375 IPR005337 RapZ-like family JHS88_13380 IPR000032 Phosphocarrier protein HPr-like JHS88_13380 IPR035895 HPr-like superfamily JHS88_13380 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site JHS88_13380 IPR002114 Phosphotransferase system, HPr serine phosphorylation site JHS88_13385 IPR006669 Magnesium transporter MgtE JHS88_13385 IPR006667 SLC41 divalent cation transporters, integral membrane domain JHS88_13385 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily JHS88_13385 IPR038048 Magnesium transporter MgtE, transmembrane domain JHS88_13385 IPR038076 MgtE, N-terminal domain superfamily JHS88_13385 IPR006668 Magnesium transporter, MgtE intracellular domain JHS88_13385 IPR000644 CBS domain JHS88_13390 IPR002510 Metalloprotease TldD/PmbA JHS88_13390 IPR036059 Metalloprotease TldD/PmbA superfamily JHS88_13390 IPR035068 Metalloprotease TldD/PmbA, N-terminal JHS88_13395 IPR006839 Ribosome-associated, YjgA JHS88_13395 IPR023153 PSPTO4464-like domain superfamily JHS88_13400 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain JHS88_13400 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JHS88_13400 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site JHS88_13400 IPR036291 NAD(P)-binding domain superfamily JHS88_13405 IPR006145 Pseudouridine synthase, RsuA/RluA JHS88_13405 IPR020103 Pseudouridine synthase, catalytic domain superfamily JHS88_13405 IPR006225 Pseudouridine synthase, RluC/RluD JHS88_13405 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site JHS88_13415 IPR001650 Helicase, C-terminal JHS88_13415 IPR023949 RNA polymerase-associated protein RapA JHS88_13415 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_13415 IPR022737 RNA polymerase recycling, bacterial, C-terminal JHS88_13415 IPR038718 SNF2-like, N-terminal domain superfamily JHS88_13415 IPR000330 SNF2-related, N-terminal domain JHS88_13415 IPR040765 RapA, N-terminal Tudor like domain 1 JHS88_13415 IPR040766 RapA, N-terminal Tudor-like domain 2 JHS88_13415 IPR014001 Helicase superfamily 1/2, ATP-binding domain JHS88_13420 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_13420 IPR002716 PIN domain JHS88_13420 IPR029060 PIN-like domain superfamily JHS88_13420 IPR003714 PhoH-like protein JHS88_13425 IPR036059 Metalloprotease TldD/PmbA superfamily JHS88_13425 IPR002510 Metalloprotease TldD/PmbA JHS88_13425 IPR035068 Metalloprotease TldD/PmbA, N-terminal JHS88_13425 IPR025502 TldD JHS88_13430 IPR003010 Carbon-nitrogen hydrolase JHS88_13430 IPR036526 Carbon-nitrogen hydrolase superfamily JHS88_13430 IPR001110 Uncharacterised protein family UPF0012, conserved site JHS88_13435 IPR011836 Conserved hypothetical protein CHP02099 JHS88_13435 IPR032712 AsmA-like, C-terminal JHS88_13435 IPR025263 Domain of unknown function DUF3971 JHS88_13440 IPR003029 S1 domain JHS88_13440 IPR012340 Nucleic acid-binding, OB-fold JHS88_13440 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G JHS88_13440 IPR022967 RNA-binding domain, S1 JHS88_13440 IPR004659 Ribonuclease E/G JHS88_13445 IPR029001 Inosine triphosphate pyrophosphatase-like JHS88_13445 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein JHS88_13450 IPR007227 Cell shape-determining protein MreD JHS88_13450 IPR026034 Cell shape-determining protein MreD, proteobacterial type JHS88_13455 IPR007221 Rod shape-determining protein MreC JHS88_13455 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 JHS88_13455 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 JHS88_13460 IPR004753 Cell shape determining protein MreB JHS88_13495 IPR012902 Prokaryotic N-terminal methylation site JHS88_13505 IPR003004 GspF/PilC family JHS88_13505 IPR018076 Type II secretion system F domain JHS88_13505 IPR042094 Type II secretion system F domain superfamily JHS88_13510 IPR007831 General secretory system II, protein E, N-terminal JHS88_13510 IPR037257 General secretory system II, protein E, N-terminal superfamily JHS88_13510 IPR001482 Type II/IV secretion system protein JHS88_13510 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_13510 IPR003593 AAA+ ATPase domain JHS88_13510 IPR042181 Type II secretion system, protein E, N-terminal JHS88_13510 IPR013374 ATPase, type IV, pilus assembly, PilB JHS88_13520 IPR036366 PGBD superfamily JHS88_13520 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_13520 IPR002477 Peptidoglycan binding-like JHS88_13520 IPR036365 PGBD-like superfamily JHS88_13520 IPR003593 AAA+ ATPase domain JHS88_13525 IPR001775 GspD/PilQ family JHS88_13525 IPR004846 Type II/III secretion system JHS88_13525 IPR011662 Secretin/TonB, short N-terminal domain JHS88_13525 IPR013355 Type IV pilus secretin PilQ JHS88_13525 IPR038591 NolW-like superfamily JHS88_13525 IPR005644 NolW-like JHS88_13525 IPR004845 Type II secretion system GspD, conserved site JHS88_13525 IPR021731 AMIN domain JHS88_13545 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 JHS88_13545 IPR000160 GGDEF domain JHS88_13545 IPR029787 Nucleotide cyclase JHS88_13545 IPR035919 EAL domain superfamily JHS88_13545 IPR001633 EAL domain JHS88_13550 IPR011344 Single-stranded DNA-binding protein JHS88_13550 IPR000424 Primosome PriB/single-strand DNA-binding JHS88_13550 IPR012340 Nucleic acid-binding, OB-fold JHS88_13555 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_13555 IPR000792 Transcription regulator LuxR, C-terminal JHS88_13555 IPR016032 Signal transduction response regulator, C-terminal effector JHS88_13560 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type JHS88_13560 IPR005835 Nucleotidyl transferase domain JHS88_13560 IPR029044 Nucleotide-diphospho-sugar transferases JHS88_13565 IPR003439 ABC transporter-like JHS88_13565 IPR004602 UvrABC system subunit A JHS88_13565 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_13565 IPR017871 ABC transporter, conserved site JHS88_13565 IPR041102 UvrA, interaction domain JHS88_13565 IPR041552 UvrA DNA-binding domain JHS88_13575 IPR000192 Aminotransferase class V domain JHS88_13575 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site JHS88_13575 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase JHS88_13575 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JHS88_13575 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JHS88_13575 IPR015424 Pyridoxal phosphate-dependent transferase JHS88_13580 IPR002912 ACT domain JHS88_13580 IPR041745 Lysine-sensitive aspartokinase 3, N-terminal catalytic domain JHS88_13580 IPR001048 Aspartate/glutamate/uridylate kinase JHS88_13580 IPR005260 Aspartate kinase, monofunctional class JHS88_13580 IPR001341 Aspartate kinase JHS88_13580 IPR018042 Aspartate kinase, conserved site JHS88_13580 IPR036393 Acetylglutamate kinase-like superfamily JHS88_13585 IPR011005 Dihydropteroate synthase-like JHS88_13585 IPR036724 Cobalamin-binding domain superfamily JHS88_13585 IPR006158 Cobalamin (vitamin B12)-binding domain JHS88_13585 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain JHS88_13585 IPR004223 Vitamin B12-dependent methionine synthase, activation domain JHS88_13585 IPR003726 Homocysteine-binding domain JHS88_13585 IPR036589 Homocysteine-binding domain superfamily JHS88_13585 IPR033706 Methionine synthase, B12-binding domain JHS88_13585 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily JHS88_13585 IPR000489 Pterin-binding domain JHS88_13585 IPR036594 Methionine synthase domain JHS88_13585 IPR011822 Cobalamin-dependent methionine synthase JHS88_13590 IPR006153 Cation/H+ exchanger JHS88_13590 IPR018422 Cation/H+ exchanger, CPA1 family JHS88_13590 IPR038770 Sodium/solute symporter superfamily JHS88_13600 IPR038717 Tc1-like transposase, DDE domain JHS88_13655 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JHS88_13655 IPR002500 Phosphoadenosine phosphosulphate reductase JHS88_13655 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase JHS88_13655 IPR011800 Phosphoadenosine phosphosulphate reductase CysH JHS88_13660 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit JHS88_13660 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily JHS88_13660 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain JHS88_13660 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site JHS88_13660 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain JHS88_13665 IPR017938 Riboflavin synthase-like beta-barrel JHS88_13665 IPR001433 Oxidoreductase FAD/NAD(P)-binding JHS88_13665 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily JHS88_13665 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JHS88_13665 IPR029039 Flavoprotein-like superfamily JHS88_13665 IPR008254 Flavodoxin/nitric oxide synthase JHS88_13665 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase JHS88_13665 IPR001094 Flavodoxin-like JHS88_13665 IPR017927 FAD-binding domain, ferredoxin reductase-type JHS88_13665 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria JHS88_13665 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding JHS88_13665 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain JHS88_13685 IPR018517 tRNA-dihydrouridine synthase, conserved site JHS88_13685 IPR001269 tRNA-dihydrouridine synthase JHS88_13685 IPR035587 DUS-like, FMN-binding domain JHS88_13685 IPR013785 Aldolase-type TIM barrel JHS88_13685 IPR004653 tRNA-dihydrouridine(20/20a) synthase JHS88_13690 IPR002481 Ferric-uptake regulator JHS88_13690 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_13690 IPR036390 Winged helix DNA-binding domain superfamily JHS88_13700 IPR001672 Phosphoglucose isomerase (PGI) JHS88_13700 IPR023096 Phosphoglucose isomerase, C-terminal JHS88_13700 IPR018189 Phosphoglucose isomerase, conserved site JHS88_13700 IPR035476 Phosphoglucose isomerase, SIS domain 1 JHS88_13700 IPR035482 Phosphoglucose isomerase, SIS domain 2 JHS88_13705 IPR001602 Uncharacterised protein family UPF0047 JHS88_13705 IPR035917 YjbQ-like superfamily JHS88_13715 IPR000821 Alanine racemase JHS88_13715 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal JHS88_13715 IPR011079 Alanine racemase, C-terminal JHS88_13715 IPR001608 Alanine racemase, N-terminal JHS88_13715 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site JHS88_13715 IPR029066 PLP-binding barrel JHS88_13720 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal JHS88_13720 IPR007693 DNA helicase, DnaB-like, N-terminal JHS88_13720 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_13720 IPR007692 DNA helicase, DnaB type JHS88_13720 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily JHS88_13720 IPR007694 DNA helicase, DnaB-like, C-terminal JHS88_13720 IPR003593 AAA+ ATPase domain JHS88_13730 IPR036935 Ribosomal protein L9, N-terminal domain superfamily JHS88_13730 IPR020070 Ribosomal protein L9, N-terminal JHS88_13730 IPR036791 Ribosomal protein L9, C-terminal domain superfamily JHS88_13730 IPR020069 Ribosomal protein L9, C-terminal JHS88_13730 IPR009027 Ribosomal protein L9/RNase H1, N-terminal JHS88_13730 IPR000244 Ribosomal protein L9 JHS88_13730 IPR020594 Ribosomal protein L9, bacteria/chloroplast JHS88_13735 IPR001648 Ribosomal protein S18 JHS88_13735 IPR018275 Ribosomal protein S18, conserved site JHS88_13735 IPR036870 Ribosomal protein S18 superfamily JHS88_13740 IPR012340 Nucleic acid-binding, OB-fold JHS88_13740 IPR000424 Primosome PriB/single-strand DNA-binding JHS88_13740 IPR023646 Primosomal replication protein PriB JHS88_13745 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 JHS88_13745 IPR035980 Ribosomal protein S6 superfamily JHS88_13745 IPR020815 Ribosomal protein S6, conserved site JHS88_13745 IPR000529 Ribosomal protein S6 JHS88_13745 IPR020814 Ribosomal protein S6, plastid/chloroplast JHS88_13750 IPR026019 Ribulose-phosphate 3-epimerase JHS88_13750 IPR000056 Ribulose-phosphate 3-epimerase-like JHS88_13750 IPR011060 Ribulose-phosphate binding barrel JHS88_13750 IPR013785 Aldolase-type TIM barrel JHS88_13755 IPR023095 Adenine-specific methyltransferase, domain 2 JHS88_13755 IPR002052 DNA methylase, N-6 adenine-specific, conserved site JHS88_13755 IPR012263 Adenine modification methylase, M.EcoRV-type JHS88_13755 IPR012327 D12 class N6 adenine-specific DNA methyltransferase JHS88_13755 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_13765 IPR016037 3-dehydroquinate synthase AroB JHS88_13765 IPR030963 3-dehydroquinate synthase family JHS88_13765 IPR030960 3-dehydroquinate synthase domain JHS88_13770 IPR023000 Shikimate kinase, conserved site JHS88_13770 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_13770 IPR000623 Shikimate kinase/Threonine synthase-like 1 JHS88_13770 IPR031322 Shikimate kinase/gluconokinase JHS88_13775 IPR021731 AMIN domain JHS88_13775 IPR001775 GspD/PilQ family JHS88_13775 IPR038591 NolW-like superfamily JHS88_13775 IPR013355 Type IV pilus secretin PilQ JHS88_13775 IPR011662 Secretin/TonB, short N-terminal domain JHS88_13775 IPR004846 Type II/III secretion system JHS88_13775 IPR004845 Type II secretion system GspD, conserved site JHS88_13775 IPR005644 NolW-like JHS88_13780 IPR007446 Pilus assembly protein PilP JHS88_13790 IPR007813 Fimbrial assembly PilN JHS88_13800 IPR031376 Penicillin-binding protein, OB-like domain JHS88_13800 IPR001460 Penicillin-binding protein, transpeptidase JHS88_13800 IPR023346 Lysozyme-like domain superfamily JHS88_13800 IPR001264 Glycosyl transferase, family 51 JHS88_13800 IPR012338 Beta-lactamase/transpeptidase-like JHS88_13800 IPR036950 Penicillin binding protein transglycosylase domain JHS88_13805 IPR036390 Winged helix DNA-binding domain superfamily JHS88_13805 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_13805 IPR000847 Transcription regulator HTH, LysR JHS88_13805 IPR005119 LysR, substrate-binding JHS88_13810 IPR013740 Redoxin JHS88_13810 IPR002109 Glutaredoxin JHS88_13810 IPR011906 Glutaredoxin domain JHS88_13810 IPR037944 Peroxiredoxin-5-like JHS88_13810 IPR014025 Glutaredoxin subgroup JHS88_13810 IPR036249 Thioredoxin-like superfamily JHS88_13810 IPR011767 Glutaredoxin active site JHS88_13820 IPR016181 Acyl-CoA N-acyltransferase JHS88_13820 IPR024083 Fumarase/histidase, N-terminal JHS88_13820 IPR008948 L-Aspartase-like JHS88_13820 IPR020557 Fumarate lyase, conserved site JHS88_13820 IPR022761 Fumarate lyase, N-terminal JHS88_13820 IPR000182 GNAT domain JHS88_13820 IPR000362 Fumarate lyase family JHS88_13820 IPR009049 Argininosuccinate lyase JHS88_13820 IPR029419 Argininosuccinate lyase, C-terminal JHS88_13820 IPR011244 Bifunctional argininosuccinate lyase/acetyltransferase JHS88_13825 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JHS88_13825 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body JHS88_13825 IPR001518 Argininosuccinate synthase JHS88_13825 IPR018223 Argininosuccinate synthase, conserved site JHS88_13825 IPR023434 Argininosuccinate synthase, type 1 subfamily JHS88_13830 IPR004662 Acetylglutamate kinase family JHS88_13830 IPR037528 Acetylglutamate kinase ArgB JHS88_13830 IPR041731 N-Acetyl-L-glutamate kinase, noncyclic JHS88_13830 IPR036393 Acetylglutamate kinase-like superfamily JHS88_13830 IPR001048 Aspartate/glutamate/uridylate kinase JHS88_13835 IPR036291 NAD(P)-binding domain superfamily JHS88_13835 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site JHS88_13835 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 JHS88_13835 IPR012280 Semialdehyde dehydrogenase, dimerisation domain JHS88_13835 IPR000534 Semialdehyde dehydrogenase, NAD-binding JHS88_13840 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site JHS88_13840 IPR010169 Acetylornithine deacetylase ArgE JHS88_13840 IPR036264 Bacterial exopeptidase dimerisation domain JHS88_13840 IPR002933 Peptidase M20 JHS88_13840 IPR011650 Peptidase M20, dimerisation domain JHS88_13845 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type JHS88_13845 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site JHS88_13845 IPR033129 Phosphoenolpyruvate carboxylase, His active site JHS88_13845 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily JHS88_13845 IPR021135 Phosphoenolpyruvate carboxylase JHS88_13855 IPR029041 FAD-linked oxidoreductase-like JHS88_13855 IPR004620 5,10-methylenetetrahydrofolate reductase JHS88_13855 IPR003171 Methylenetetrahydrofolate reductase JHS88_13860 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain JHS88_13860 IPR036393 Acetylglutamate kinase-like superfamily JHS88_13860 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding JHS88_13860 IPR018042 Aspartate kinase, conserved site JHS88_13860 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I JHS88_13860 IPR001342 Homoserine dehydrogenase, catalytic JHS88_13860 IPR019811 Homoserine dehydrogenase, conserved site JHS88_13860 IPR036291 NAD(P)-binding domain superfamily JHS88_13860 IPR001341 Aspartate kinase JHS88_13860 IPR001048 Aspartate/glutamate/uridylate kinase JHS88_13865 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JHS88_13865 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JHS88_13865 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme JHS88_13865 IPR015424 Pyridoxal phosphate-dependent transferase JHS88_13865 IPR011821 O-succinylhomoserine (thiol)-lyase JHS88_13870 IPR023453 Methionine repressor MetJ domain superfamily JHS88_13870 IPR010985 Ribbon-helix-helix JHS88_13870 IPR002084 Methionine repressor MetJ JHS88_13875 IPR012302 Malic enzyme, NAD-binding JHS88_13875 IPR037062 Malic enzyme, N-terminal domain superfamily JHS88_13875 IPR012301 Malic enzyme, N-terminal domain JHS88_13875 IPR015884 Malic enzyme, conserved site JHS88_13875 IPR036291 NAD(P)-binding domain superfamily JHS88_13875 IPR001891 Malic oxidoreductase JHS88_13880 IPR012347 Ferritin-like JHS88_13880 IPR009078 Ferritin-like superfamily JHS88_13880 IPR002024 Bacterioferritin JHS88_13880 IPR009040 Ferritin-like diiron domain JHS88_13880 IPR008331 Ferritin/DPS protein domain JHS88_13885 IPR007419 BFD-like [2Fe-2S]-binding domain JHS88_13885 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily JHS88_13890 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal JHS88_13890 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle JHS88_13890 IPR009000 Translation protein, beta-barrel domain superfamily JHS88_13890 IPR000795 Transcription factor, GTP-binding domain JHS88_13890 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_13890 IPR031157 Tr-type G domain, conserved site JHS88_13890 IPR033720 Elongation factor Tu, domain 2 JHS88_13890 IPR004161 Translation elongation factor EFTu-like, domain 2 JHS88_13890 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain JHS88_13890 IPR005225 Small GTP-binding protein domain JHS88_13890 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal JHS88_13895 IPR041095 Elongation Factor G, domain II JHS88_13895 IPR035649 EFG, domain V JHS88_13895 IPR009022 Elongation factor G, domain III JHS88_13895 IPR035647 EF-G domain III/V-like JHS88_13895 IPR000640 Elongation factor EFG, domain V-like JHS88_13895 IPR004161 Translation elongation factor EFTu-like, domain 2 JHS88_13895 IPR031157 Tr-type G domain, conserved site JHS88_13895 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_13895 IPR020568 Ribosomal protein S5 domain 2-type fold JHS88_13895 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JHS88_13895 IPR005225 Small GTP-binding protein domain JHS88_13895 IPR000795 Transcription factor, GTP-binding domain JHS88_13895 IPR005517 Translation elongation factor EFG/EF2, domain IV JHS88_13895 IPR004540 Translation elongation factor EFG/EF2 JHS88_13895 IPR009000 Translation protein, beta-barrel domain superfamily JHS88_13900 IPR005717 Ribosomal protein S7, bacterial/organellar-type JHS88_13900 IPR000235 Ribosomal protein S5/S7 JHS88_13900 IPR036823 Ribosomal protein S7 domain superfamily JHS88_13900 IPR023798 Ribosomal protein S7 domain JHS88_13900 IPR020606 Ribosomal protein S7, conserved site JHS88_13905 IPR005679 Ribosomal protein S12, bacterial-type JHS88_13905 IPR006032 Ribosomal protein S12/S23 JHS88_13905 IPR012340 Nucleic acid-binding, OB-fold JHS88_13910 IPR027396 DsrEFH-like JHS88_13910 IPR023526 Sulphur relay, TusB JHS88_13910 IPR007215 Sulphur relay, TusB/DsrH JHS88_13915 IPR027396 DsrEFH-like JHS88_13915 IPR003787 Sulphur relay, DsrE/F-like protein JHS88_13915 IPR017462 Sulphur relay, TusC/DsrF JHS88_13920 IPR003787 Sulphur relay, DsrE/F-like protein JHS88_13920 IPR017463 Sulphur relay, TusD/DsrE JHS88_13920 IPR027396 DsrEFH-like JHS88_13925 IPR039445 Transcriptional regulator DauR-like, HTH domain JHS88_13925 IPR013559 YheO-like JHS88_13925 IPR039446 Transcriptional regulator DauR-like JHS88_13930 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain JHS88_13930 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal JHS88_13930 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily JHS88_13940 IPR007236 SlyX JHS88_13945 IPR000246 Peptidase T2, asparaginase 2 JHS88_13945 IPR029055 Nucleophile aminohydrolases, N-terminal JHS88_13950 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain JHS88_13960 IPR004771 K+/H+ exchanger JHS88_13960 IPR020884 Glutathione-regulated potassium-efflux system protein KefB JHS88_13960 IPR003148 Regulator of K+ conductance, N-terminal JHS88_13960 IPR036291 NAD(P)-binding domain superfamily JHS88_13960 IPR038770 Sodium/solute symporter superfamily JHS88_13960 IPR006153 Cation/H+ exchanger JHS88_13965 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG JHS88_13965 IPR003680 Flavodoxin-like fold JHS88_13965 IPR029039 Flavoprotein-like superfamily JHS88_13970 IPR003593 AAA+ ATPase domain JHS88_13970 IPR032781 ABC-transporter extension domain JHS88_13970 IPR003439 ABC transporter-like JHS88_13970 IPR017871 ABC transporter, conserved site JHS88_13970 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_13980 IPR000952 AB hydrolase 4, conserved site JHS88_13980 IPR012020 AB hydrolase 4 family JHS88_13980 IPR000073 Alpha/beta hydrolase fold-1 JHS88_13980 IPR029058 Alpha/Beta hydrolase fold JHS88_13985 IPR010648 Uncharacterised protein family UPF0270 JHS88_13985 IPR036685 YehU-like superfamily JHS88_13990 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_13990 IPR006082 Phosphoribulokinase JHS88_13990 IPR006083 Phosphoribulokinase/uridine kinase JHS88_13995 IPR012318 Crp-type HTH domain JHS88_13995 IPR014710 RmlC-like jelly roll fold JHS88_13995 IPR036390 Winged helix DNA-binding domain superfamily JHS88_13995 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_13995 IPR018335 Transcription regulator HTH, Crp-type, conserved site JHS88_13995 IPR018488 Cyclic nucleotide-binding, conserved site JHS88_13995 IPR018490 Cyclic nucleotide-binding-like JHS88_13995 IPR000595 Cyclic nucleotide-binding domain JHS88_14005 IPR016161 Aldehyde/histidinol dehydrogenase JHS88_14005 IPR016163 Aldehyde dehydrogenase, C-terminal JHS88_14005 IPR016160 Aldehyde dehydrogenase, cysteine active site JHS88_14005 IPR029510 Aldehyde dehydrogenase, glutamic acid active site JHS88_14005 IPR016162 Aldehyde dehydrogenase, N-terminal JHS88_14005 IPR015590 Aldehyde dehydrogenase domain JHS88_14005 IPR017649 Succinylglutamate-semialdehyde dehydrogenase JHS88_14010 IPR007041 Arginine N-succinyltransferase AstA/AruG JHS88_14010 IPR017650 Arginine N-succinyltransferase JHS88_14010 IPR016181 Acyl-CoA N-acyltransferase JHS88_14015 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria JHS88_14015 IPR004636 Acetylornithine/Succinylornithine transaminase family JHS88_14015 IPR015424 Pyridoxal phosphate-dependent transferase JHS88_14015 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JHS88_14015 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JHS88_14015 IPR005814 Aminotransferase class-III JHS88_14020 IPR029062 Class I glutamine amidotransferase-like JHS88_14020 IPR017926 Glutamine amidotransferase JHS88_14020 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain JHS88_14035 IPR002305 Aminoacyl-tRNA synthetase, class Ic JHS88_14035 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JHS88_14035 IPR002306 Tryptophan-tRNA ligase JHS88_14035 IPR024109 Tryptophan-tRNA ligase, bacterial-type JHS88_14040 IPR037512 Phosphoglycolate phosphatase, prokaryotic JHS88_14040 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic JHS88_14040 IPR023198 Phosphoglycolate phosphatase-like, domain 2 JHS88_14040 IPR023214 HAD superfamily JHS88_14040 IPR041492 Haloacid dehalogenase-like hydrolase JHS88_14040 IPR006549 HAD-superfamily hydrolase,subfamily IIIA JHS88_14040 IPR006439 HAD hydrolase, subfamily IA JHS88_14040 IPR036412 HAD-like superfamily JHS88_14045 IPR029028 Alpha/beta knot methyltransferases JHS88_14045 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB JHS88_14045 IPR029064 50S ribosomal protein L30e-like JHS88_14045 IPR004441 RNA methyltransferase TrmH family JHS88_14045 IPR001537 tRNA/rRNA methyltransferase, SpoU type JHS88_14045 IPR013123 RNA 2-O ribose methyltransferase, substrate binding JHS88_14045 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JHS88_14050 IPR013223 Ribonuclease B, N-terminal OB domain JHS88_14050 IPR013668 Ribonuclease R winged-helix domain JHS88_14050 IPR022966 Ribonuclease II/R, conserved site JHS88_14050 IPR001900 Ribonuclease II/R JHS88_14050 IPR011805 Ribonuclease R JHS88_14050 IPR040476 RNase II/RNase R, cold shock domain JHS88_14050 IPR004476 Ribonuclease II/ribonuclease R JHS88_14050 IPR022967 RNA-binding domain, S1 JHS88_14050 IPR011129 Cold shock domain JHS88_14050 IPR012340 Nucleic acid-binding, OB-fold JHS88_14050 IPR003029 S1 domain JHS88_14055 IPR036390 Winged helix DNA-binding domain superfamily JHS88_14055 IPR000944 Transcription regulator Rrf2-type JHS88_14055 IPR023761 Transcriptional repressor HTH, NsrR JHS88_14055 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_14055 IPR030489 Transcription regulator Rrf2-type, conserved site JHS88_14060 IPR012292 Globin/Protoglobin JHS88_14060 IPR023950 Flavohemoprotein JHS88_14060 IPR001433 Oxidoreductase FAD/NAD(P)-binding JHS88_14060 IPR017938 Riboflavin synthase-like beta-barrel JHS88_14060 IPR009050 Globin-like superfamily JHS88_14060 IPR000971 Globin JHS88_14060 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JHS88_14060 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase JHS88_14060 IPR017927 FAD-binding domain, ferredoxin reductase-type JHS88_14060 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain JHS88_14065 IPR006597 Sel1-like repeat JHS88_14065 IPR011990 Tetratricopeptide-like helical domain superfamily JHS88_14070 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_14070 IPR018220 Adenylosuccinate synthase, GTP-binding site JHS88_14070 IPR001114 Adenylosuccinate synthetase JHS88_14070 IPR042109 Adenylosuccinate synthetase, domain 1 JHS88_14070 IPR042110 Adenylosuccinate synthetase, domain 2 JHS88_14070 IPR042111 Adenylosuccinate synthetase, domain 3 JHS88_14070 IPR033128 Adenylosuccinate synthase, active site JHS88_14075 IPR019201 Protein of unknown function DUF2065 JHS88_14080 IPR001107 Band 7 domain JHS88_14080 IPR036013 Band 7/SPFH domain superfamily JHS88_14080 IPR010200 HflC JHS88_14085 IPR010201 HflK JHS88_14085 IPR001107 Band 7 domain JHS88_14085 IPR036013 Band 7/SPFH domain superfamily JHS88_14085 IPR020980 Menbrane protein HflK, N-terminal JHS88_14085 IPR001972 Stomatin family JHS88_14090 IPR030394 HflX-type guanine nucleotide-binding (G) domain JHS88_14090 IPR032305 GTP-binding protein, middle domain JHS88_14090 IPR006073 GTP binding domain JHS88_14090 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_14090 IPR035647 EF-G domain III/V-like JHS88_14090 IPR025121 GTPase HflX, N-terminal JHS88_14090 IPR016496 GTPase HflX JHS88_14090 IPR042108 GTPase HflX, N-terminal domain superfamily JHS88_14095 IPR005001 RNA-binding protein Hfq JHS88_14095 IPR010920 LSM domain superfamily JHS88_14100 IPR039657 Dimethylallyltransferase JHS88_14100 IPR018022 IPP transferase JHS88_14100 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_14105 IPR042120 MutL, C-terminal domain, dimerisation subdomain JHS88_14105 IPR014762 DNA mismatch repair, conserved site JHS88_14105 IPR020667 DNA mismatch repair protein, MutL JHS88_14105 IPR002099 DNA mismatch repair protein family, N-terminal JHS88_14105 IPR013507 DNA mismatch repair protein, S5 domain 2-like JHS88_14105 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_14105 IPR014790 MutL, C-terminal, dimerisation JHS88_14105 IPR020568 Ribosomal protein S5 domain 2-type fold JHS88_14105 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JHS88_14105 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms JHS88_14105 IPR037198 MutL, C-terminal domain superfamily JHS88_14105 IPR042121 MutL, C-terminal domain, regulatory subdomain JHS88_14110 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain JHS88_14115 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE JHS88_14115 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_14120 IPR013542 Domain of unknown function DUF1730 JHS88_14120 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JHS88_14120 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JHS88_14120 IPR004453 Epoxyqueuosine reductase QueG JHS88_14190 IPR012337 Ribonuclease H-like superfamily JHS88_14190 IPR036397 Ribonuclease H superfamily JHS88_14190 IPR013520 Exonuclease, RNase T/DNA polymerase III JHS88_14190 IPR022894 Oligoribonuclease JHS88_14195 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain JHS88_14195 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_14195 IPR010914 RsgA GTPase domain JHS88_14195 IPR004881 Ribosome biogenesis GTPase RsgA JHS88_14200 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 JHS88_14200 IPR033177 Phosphatidylserine decarboxylase JHS88_14200 IPR003817 Phosphatidylserine decarboxylase-related JHS88_14205 IPR001898 Solute carrier family 13 JHS88_14205 IPR031312 Sodium/sulphate symporter, conserved site JHS88_14210 IPR006118 Recombinase, conserved site JHS88_14210 IPR006119 Resolvase, N-terminal catalytic domain JHS88_14210 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily JHS88_14210 IPR009057 Homeobox-like domain superfamily JHS88_14210 IPR006120 Resolvase, HTH domain JHS88_14255 IPR011258 BPG-independent PGAM, N-terminal JHS88_14255 IPR006124 Metalloenzyme JHS88_14255 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily JHS88_14255 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent JHS88_14255 IPR017850 Alkaline-phosphatase-like, core domain superfamily JHS88_14260 IPR001763 Rhodanese-like domain JHS88_14260 IPR036873 Rhodanese-like domain superfamily JHS88_14265 IPR035958 SecB-like superfamily JHS88_14265 IPR003708 Bacterial protein export chaperone SecB JHS88_14270 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily JHS88_14270 IPR013328 6-phosphogluconate dehydrogenase, domain 2 JHS88_14270 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent JHS88_14270 IPR036291 NAD(P)-binding domain superfamily JHS88_14270 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal JHS88_14270 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal JHS88_14275 IPR010493 Serine acetyltransferase, N-terminal JHS88_14275 IPR042122 Serine acetyltransferase, N-terminal domain superfamily JHS88_14275 IPR005881 Serine O-acetyltransferase JHS88_14275 IPR001451 Hexapeptide repeat JHS88_14275 IPR011004 Trimeric LpxA-like superfamily JHS88_14275 IPR018357 Hexapeptide transferase, conserved site JHS88_14280 IPR011055 Duplicated hybrid motif JHS88_14280 IPR016047 Peptidase M23 JHS88_14290 IPR001647 DNA-binding HTH domain, TetR-type JHS88_14290 IPR009057 Homeobox-like domain superfamily JHS88_14290 IPR023772 DNA-binding HTH domain, TetR-type, conserved site JHS88_14290 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JHS88_14290 IPR013571 Transcription regulator QacR, C-terminal JHS88_14300 IPR004525 Elongation factor P--(R)-beta-lysine ligase JHS88_14300 IPR006195 Aminoacyl-tRNA synthetase, class II JHS88_14300 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) JHS88_14305 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily JHS88_14305 IPR005884 Fumarate reductase, flavoprotein subunit JHS88_14305 IPR036188 FAD/NAD(P)-binding domain superfamily JHS88_14305 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain JHS88_14305 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal JHS88_14305 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site JHS88_14305 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily JHS88_14305 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit JHS88_14310 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal JHS88_14310 IPR009051 Alpha-helical ferredoxin JHS88_14310 IPR012675 Beta-grasp domain superfamily JHS88_14310 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JHS88_14310 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JHS88_14310 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site JHS88_14310 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain JHS88_14310 IPR036010 2Fe-2S ferredoxin-like superfamily JHS88_14310 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein JHS88_14315 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit JHS88_14315 IPR003510 Fumarate reductase, subunit C JHS88_14320 IPR003418 Fumarate reductase, subunit D JHS88_14320 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit JHS88_14330 IPR013852 Translation elongation factor P/YeiP, conserved site JHS88_14330 IPR015365 Elongation factor P, C-terminal JHS88_14330 IPR012340 Nucleic acid-binding, OB-fold JHS88_14330 IPR014722 Ribosomal protein L2, domain 2 JHS88_14330 IPR020599 Translation elongation factor P/YeiP JHS88_14330 IPR013185 Translation elongation factor, KOW-like JHS88_14330 IPR001059 Translation elongation factor P/YeiP, central JHS88_14330 IPR011768 Translation elongation factor P JHS88_14330 IPR008991 Translation protein SH3-like domain superfamily JHS88_14335 IPR022462 Lysine-2,3-aminomutase-like JHS88_14335 IPR007197 Radical SAM JHS88_14335 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase JHS88_14335 IPR013785 Aldolase-type TIM barrel JHS88_14340 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site JHS88_14340 IPR001608 Alanine racemase, N-terminal JHS88_14340 IPR011079 Alanine racemase, C-terminal JHS88_14340 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal JHS88_14340 IPR000821 Alanine racemase JHS88_14340 IPR029066 PLP-binding barrel JHS88_14345 IPR003416 MgtC/SapB/SrpB/YhiD family JHS88_14355 IPR002423 Chaperonin Cpn60/TCP-1 family JHS88_14355 IPR018370 Chaperonin Cpn60, conserved site JHS88_14355 IPR001844 Chaperonin Cpn60 JHS88_14355 IPR027409 GroEL-like apical domain superfamily JHS88_14355 IPR027413 GroEL-like equatorial domain superfamily JHS88_14355 IPR027410 TCP-1-like chaperonin intermediate domain superfamily JHS88_14360 IPR020818 GroES chaperonin family JHS88_14360 IPR037124 GroES chaperonin superfamily JHS88_14360 IPR018369 Chaperonin GroES, conserved site JHS88_14360 IPR011032 GroES-like superfamily JHS88_14365 IPR002528 Multi antimicrobial extrusion protein JHS88_14370 IPR035966 Phosphofructokinase superfamily JHS88_14370 IPR000023 Phosphofructokinase domain JHS88_14370 IPR015912 Phosphofructokinase, conserved site JHS88_14370 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic JHS88_14370 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type JHS88_14370 IPR022953 ATP-dependent 6-phosphofructokinase JHS88_14375 IPR002524 Cation efflux protein JHS88_14375 IPR036837 Cation efflux protein, cytoplasmic domain superfamily JHS88_14375 IPR027469 Cation efflux transmembrane domain superfamily JHS88_14375 IPR023783 Cation efflux pump FieF JHS88_14375 IPR027470 Cation efflux protein, cytoplasmic domain JHS88_14380 IPR012899 LTXXQ motif family protein JHS88_14385 IPR039420 Transcriptional regulatory protein WalR-like JHS88_14385 IPR001789 Signal transduction response regulator, receiver domain JHS88_14385 IPR001867 OmpR/PhoB-type DNA-binding domain JHS88_14385 IPR011006 CheY-like superfamily JHS88_14385 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_14390 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JHS88_14390 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JHS88_14390 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JHS88_14390 IPR005467 Histidine kinase domain JHS88_14390 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_14390 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_14390 IPR038515 CpxA, periplasmic domain superfamily JHS88_14390 IPR032404 Two-component sensor protein CpxA, periplasmic domain JHS88_14390 IPR003660 HAMP domain JHS88_14395 IPR019833 Manganese/iron superoxide dismutase, binding site JHS88_14395 IPR019832 Manganese/iron superoxide dismutase, C-terminal JHS88_14395 IPR019831 Manganese/iron superoxide dismutase, N-terminal JHS88_14395 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily JHS88_14395 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily JHS88_14395 IPR001189 Manganese/iron superoxide dismutase JHS88_14400 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JHS88_14400 IPR029028 Alpha/beta knot methyltransferases JHS88_14400 IPR001537 tRNA/rRNA methyltransferase, SpoU type JHS88_14400 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase JHS88_14405 IPR007313 FxsA cytoplasmic membrane protein JHS88_14410 IPR020557 Fumarate lyase, conserved site JHS88_14410 IPR000362 Fumarate lyase family JHS88_14410 IPR022761 Fumarate lyase, N-terminal JHS88_14410 IPR008948 L-Aspartase-like JHS88_14410 IPR024083 Fumarase/histidase, N-terminal JHS88_14410 IPR004708 Aspartate ammonia-lyase JHS88_14410 IPR018951 Fumarase C, C-terminal JHS88_14415 IPR004668 Anaerobic c4-dicarboxylate membrane transporter JHS88_14420 IPR003834 Cytochrome C biogenesis protein, transmembrane domain JHS88_14420 IPR013766 Thioredoxin domain JHS88_14420 IPR022910 Thiol:disulphide interchange protein DsbD JHS88_14420 IPR017937 Thioredoxin, conserved site JHS88_14420 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily JHS88_14420 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain JHS88_14420 IPR035671 DsbD gamma JHS88_14420 IPR036249 Thioredoxin-like superfamily JHS88_14425 IPR011006 CheY-like superfamily JHS88_14425 IPR001789 Signal transduction response regulator, receiver domain JHS88_14425 IPR000792 Transcription regulator LuxR, C-terminal JHS88_14425 IPR016032 Signal transduction response regulator, C-terminal effector JHS88_14430 IPR030151 K(+)/H(+) antiporter NhaP JHS88_14430 IPR023729 K(+)/H(+) antiporter NhaP2 JHS88_14430 IPR006037 Regulator of K+ conductance, C-terminal JHS88_14430 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily JHS88_14430 IPR005170 Transporter-associated domain JHS88_14430 IPR006153 Cation/H+ exchanger JHS88_14430 IPR036318 FAD-binding, type PCMH-like superfamily JHS88_14430 IPR038770 Sodium/solute symporter superfamily JHS88_14430 IPR016169 FAD-binding, type PCMH, subdomain 2 JHS88_14440 IPR038377 Sodium/glucose symporter superfamily JHS88_14440 IPR001734 Sodium/solute symporter JHS88_14440 IPR019899 Sodium/solute symporter, VC2705 subfamily JHS88_14455 IPR000362 Fumarate lyase family JHS88_14455 IPR022761 Fumarate lyase, N-terminal JHS88_14455 IPR020557 Fumarate lyase, conserved site JHS88_14455 IPR018951 Fumarase C, C-terminal JHS88_14455 IPR024083 Fumarase/histidase, N-terminal JHS88_14455 IPR005677 Fumarate hydratase, class II JHS88_14455 IPR008948 L-Aspartase-like JHS88_14460 IPR001789 Signal transduction response regulator, receiver domain JHS88_14460 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JHS88_14460 IPR029151 Periplasmic sensor-like domain superfamily JHS88_14460 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JHS88_14460 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JHS88_14460 IPR005467 Histidine kinase domain JHS88_14460 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_14460 IPR011006 CheY-like superfamily JHS88_14460 IPR015387 LuxQ, periplasmic JHS88_14460 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_14465 IPR026032 Probable 3-phenylpropionic acid transporter JHS88_14465 IPR024989 Major facilitator superfamily associated domain JHS88_14465 IPR036259 MFS transporter superfamily JHS88_14480 IPR011904 Acetate-CoA ligase JHS88_14480 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain JHS88_14480 IPR025110 AMP-binding enzyme, C-terminal domain JHS88_14480 IPR020845 AMP-binding, conserved site JHS88_14480 IPR000873 AMP-dependent synthetase/ligase JHS88_14480 IPR042099 AMP-dependent synthetase-like superfamily JHS88_14485 IPR001874 Dehydroquinase, class II JHS88_14485 IPR018509 Dehydroquinase, class II, conserved site JHS88_14485 IPR036441 Dehydroquinase, class II superfamily JHS88_14490 IPR000089 Biotin/lipoyl attachment JHS88_14490 IPR011053 Single hybrid motif JHS88_14490 IPR001249 Acetyl-CoA biotin carboxyl carrier JHS88_14490 IPR001882 Biotin-binding site JHS88_14495 IPR011054 Rudiment single hybrid motif JHS88_14495 IPR016185 Pre-ATP-grasp domain superfamily JHS88_14495 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase JHS88_14495 IPR005482 Biotin carboxylase, C-terminal JHS88_14495 IPR011764 Biotin carboxylation domain JHS88_14495 IPR005481 Biotin carboxylase-like, N-terminal domain JHS88_14495 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain JHS88_14495 IPR011761 ATP-grasp fold JHS88_14495 IPR013815 ATP-grasp fold, subdomain 1 JHS88_14500 IPR004498 Ribosomal protein L11 methyltransferase JHS88_14500 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_14505 IPR013785 Aldolase-type TIM barrel JHS88_14505 IPR035587 DUS-like, FMN-binding domain JHS88_14505 IPR032887 tRNA-dihydrouridine synthase B JHS88_14505 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal JHS88_14505 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 JHS88_14505 IPR001269 tRNA-dihydrouridine synthase JHS88_14505 IPR018517 tRNA-dihydrouridine synthase, conserved site JHS88_14510 IPR009057 Homeobox-like domain superfamily JHS88_14510 IPR002197 DNA binding HTH domain, Fis-type JHS88_14510 IPR005412 DNA-binding protein Fis JHS88_14515 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG JHS88_14515 IPR011701 Major facilitator superfamily JHS88_14515 IPR020846 Major facilitator superfamily domain JHS88_14515 IPR036259 MFS transporter superfamily JHS88_14520 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_14520 IPR003593 AAA+ ATPase domain JHS88_14520 IPR032781 ABC-transporter extension domain JHS88_14520 IPR003439 ABC transporter-like JHS88_14520 IPR017871 ABC transporter, conserved site JHS88_14525 IPR000160 GGDEF domain JHS88_14525 IPR029787 Nucleotide cyclase JHS88_14525 IPR007894 MASE2 JHS88_14595 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal JHS88_14595 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JHS88_14595 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JHS88_14595 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal JHS88_14595 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily JHS88_14595 IPR000310 Orn/Lys/Arg decarboxylase, major domain JHS88_14595 IPR011193 Ornithine/lysine/arginine decarboxylase JHS88_14595 IPR015424 Pyridoxal phosphate-dependent transferase JHS88_14600 IPR004754 Amino acid antiporter JHS88_14600 IPR002293 Amino acid/polyamine transporter I JHS88_14605 IPR040970 CadC C-terminal domain 1 JHS88_14605 IPR001867 OmpR/PhoB-type DNA-binding domain JHS88_14605 IPR016032 Signal transduction response regulator, C-terminal effector JHS88_14605 IPR011990 Tetratricopeptide-like helical domain superfamily JHS88_14605 IPR039420 Transcriptional regulatory protein WalR-like JHS88_14605 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_14610 IPR000551 MerR-type HTH domain JHS88_14610 IPR009061 Putative DNA-binding domain superfamily JHS88_14610 IPR011788 Zn(II)-responsive transcriptional regulator JHS88_14615 IPR024051 AICAR transformylase, duplicated domain superfamily JHS88_14615 IPR016193 Cytidine deaminase-like JHS88_14615 IPR011607 Methylglyoxal synthase-like domain JHS88_14615 IPR036914 Methylglyoxal synthase-like domain superfamily JHS88_14615 IPR002695 Bifunctional purine biosynthesis protein PurH-like JHS88_14620 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JHS88_14620 IPR016185 Pre-ATP-grasp domain superfamily JHS88_14620 IPR011054 Rudiment single hybrid motif JHS88_14620 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal JHS88_14620 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily JHS88_14620 IPR020560 Phosphoribosylglycinamide synthetase, C-domain JHS88_14620 IPR013815 ATP-grasp fold, subdomain 1 JHS88_14620 IPR011761 ATP-grasp fold JHS88_14620 IPR020559 Phosphoribosylglycinamide synthetase, conserved site JHS88_14620 IPR000115 Phosphoribosylglycinamide synthetase JHS88_14630 IPR000119 Histone-like DNA-binding protein JHS88_14630 IPR020816 Histone-like DNA-binding protein, conserved site JHS88_14630 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily JHS88_14635 IPR002550 CNNM, transmembrane domain JHS88_14635 IPR000644 CBS domain JHS88_14640 IPR023381 YP001051499.1-like domain superfamily JHS88_14640 IPR007338 Protein of unknown function DUF416 JHS88_14645 IPR036291 NAD(P)-binding domain superfamily JHS88_14645 IPR023514 Glyoxylate/hydroxypyruvate reductase A JHS88_14645 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain JHS88_14645 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site JHS88_14650 IPR005122 Uracil-DNA glycosylase-like JHS88_14650 IPR036895 Uracil-DNA glycosylase-like domain superfamily JHS88_14655 IPR000257 Uroporphyrinogen decarboxylase (URO-D) JHS88_14655 IPR038071 UROD/MetE-like superfamily JHS88_14655 IPR006361 Uroporphyrinogen decarboxylase HemE JHS88_14670 IPR015797 NUDIX hydrolase-like domain superfamily JHS88_14670 IPR020084 NUDIX hydrolase, conserved site JHS88_14670 IPR000086 NUDIX hydrolase domain JHS88_14670 IPR015376 Zinc ribbon, NADH pyrophosphatase JHS88_14670 IPR022925 NADH pyrophosphatase NudC JHS88_14675 IPR038309 Rsd/AlgQ superfamily JHS88_14675 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd JHS88_14675 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ JHS88_14680 IPR038120 RNA polymerase Rpb1, funnel domain superfamily JHS88_14680 IPR012754 DNA-directed RNA polymerase, subunit beta-prime JHS88_14680 IPR000722 RNA polymerase, alpha subunit JHS88_14680 IPR006592 RNA polymerase, N-terminal JHS88_14680 IPR007081 RNA polymerase Rpb1, domain 5 JHS88_14680 IPR007083 RNA polymerase Rpb1, domain 4 JHS88_14680 IPR042102 RNA polymerase Rpb1, domain 3 superfamily JHS88_14680 IPR007066 RNA polymerase Rpb1, domain 3 JHS88_14680 IPR007080 RNA polymerase Rpb1, domain 1 JHS88_14685 IPR015712 DNA-directed RNA polymerase, subunit 2 JHS88_14685 IPR007644 RNA polymerase, beta subunit, protrusion JHS88_14685 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain JHS88_14685 IPR007642 RNA polymerase Rpb2, domain 2 JHS88_14685 IPR037034 RNA polymerase Rpb2, domain 2 superfamily JHS88_14685 IPR007645 RNA polymerase Rpb2, domain 3 JHS88_14685 IPR007641 RNA polymerase Rpb2, domain 7 JHS88_14685 IPR014724 RNA polymerase Rpb2, OB-fold JHS88_14685 IPR007121 RNA polymerase, beta subunit, conserved site JHS88_14685 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain JHS88_14685 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type JHS88_14685 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily JHS88_14690 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like JHS88_14690 IPR013823 Ribosomal protein L7/L12, C-terminal JHS88_14690 IPR008932 Ribosomal protein L7/L12, oligomerisation JHS88_14690 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily JHS88_14690 IPR000206 Ribosomal protein L7/L12 JHS88_14695 IPR022973 Ribosomal protein L10 JHS88_14695 IPR001790 Ribosomal protein L10P JHS88_14700 IPR023673 Ribosomal protein L1, conserved site JHS88_14700 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich JHS88_14700 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein JHS88_14700 IPR023674 Ribosomal protein L1-like JHS88_14700 IPR002143 Ribosomal protein L1 JHS88_14700 IPR005878 Ribosomal protein L1, bacterial-type JHS88_14705 IPR000911 Ribosomal protein L11/L12 JHS88_14705 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily JHS88_14705 IPR006519 Ribosomal protein L11, bacterial-type JHS88_14705 IPR020783 Ribosomal protein L11, C-terminal JHS88_14705 IPR036769 Ribosomal protein L11, C-terminal domain superfamily JHS88_14705 IPR020785 Ribosomal protein L11, conserved site JHS88_14705 IPR020784 Ribosomal protein L11, N-terminal JHS88_14710 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site JHS88_14710 IPR008991 Translation protein SH3-like domain superfamily JHS88_14710 IPR005824 KOW JHS88_14710 IPR006645 NusG, N-terminal JHS88_14710 IPR036735 NusG, N-terminal domain superfamily JHS88_14710 IPR014722 Ribosomal protein L2, domain 2 JHS88_14710 IPR001062 Transcription antitermination protein, NusG JHS88_14715 IPR038379 SecE superfamily JHS88_14715 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit JHS88_14715 IPR005807 SecE subunit of protein translocation complex, bacterial-like JHS88_14720 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal JHS88_14720 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle JHS88_14720 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal JHS88_14720 IPR009000 Translation protein, beta-barrel domain superfamily JHS88_14720 IPR000795 Transcription factor, GTP-binding domain JHS88_14720 IPR005225 Small GTP-binding protein domain JHS88_14720 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_14720 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain JHS88_14720 IPR004161 Translation elongation factor EFTu-like, domain 2 JHS88_14720 IPR033720 Elongation factor Tu, domain 2 JHS88_14720 IPR031157 Tr-type G domain, conserved site JHS88_14745 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_14745 IPR004566 Pantothenate kinase JHS88_14745 IPR006083 Phosphoribulokinase/uridine kinase JHS88_14750 IPR008988 Transcriptional repressor, C-terminal JHS88_14750 IPR036390 Winged helix DNA-binding domain superfamily JHS88_14750 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_14750 IPR013196 Helix-turn-helix, type 11 JHS88_14750 IPR003142 Biotin protein ligase, C-terminal JHS88_14750 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain JHS88_14750 IPR004408 Biotin--acetyl-CoA-carboxylase ligase JHS88_14750 IPR030855 Bifunctional ligase/repressor BirA JHS88_14750 IPR004409 Biotin operon repressor, helix-turn-helix domain JHS88_14755 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal JHS88_14755 IPR006094 FAD linked oxidase, N-terminal JHS88_14755 IPR016166 FAD-binding domain, PCMH-type JHS88_14755 IPR036318 FAD-binding, type PCMH-like superfamily JHS88_14755 IPR016167 FAD-binding, type PCMH, subdomain 1 JHS88_14755 IPR016169 FAD-binding, type PCMH, subdomain 2 JHS88_14755 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase JHS88_14755 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily JHS88_14765 IPR001736 Phospholipase D/Transphosphatidylase JHS88_14765 IPR025202 Phospholipase D-like domain JHS88_14765 IPR016270 CDP-alcohol phosphatidyltransferase class-II family JHS88_14820 IPR001920 Asp/Glu racemase JHS88_14820 IPR018187 Asp/Glu racemase, active site 1 JHS88_14820 IPR004391 Glutamate racemase JHS88_14820 IPR015942 Asp/Glu/hydantoin racemase JHS88_14830 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily JHS88_14830 IPR010101 TonB-dependent vitamin B12 transporter BtuB JHS88_14830 IPR039426 Vitamin B12 transporter BtuB-like JHS88_14830 IPR012910 TonB-dependent receptor, plug domain JHS88_14830 IPR037066 TonB-dependent receptor, plug domain superfamily JHS88_14830 IPR000531 TonB-dependent receptor-like, beta-barrel JHS88_14830 IPR010916 TonB box, conserved site JHS88_14830 IPR010917 TonB-dependent receptor, conserved site JHS88_14835 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_14835 IPR030390 RNA methyltransferase TrmA, active site JHS88_14835 IPR010280 (Uracil-5)-methyltransferase family JHS88_14835 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA JHS88_14835 IPR030391 RNA methyltransferase TrmA, conserved site JHS88_14845 IPR009057 Homeobox-like domain superfamily JHS88_14845 IPR001647 DNA-binding HTH domain, TetR-type JHS88_14845 IPR023764 Transcriptional repressor HTH, FabR JHS88_14850 IPR036188 FAD/NAD(P)-binding domain superfamily JHS88_14850 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily JHS88_14850 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I JHS88_14850 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JHS88_14850 IPR023753 FAD/NAD(P)-binding domain JHS88_14850 IPR022962 Soluble pyridine nucleotide transhydrogenase JHS88_14855 IPR002528 Multi antimicrobial extrusion protein JHS88_14860 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP JHS88_14860 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp JHS88_14860 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_14865 IPR036390 Winged helix DNA-binding domain superfamily JHS88_14865 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_14865 IPR015927 Peptidase S24/S26A/S26B/S26C JHS88_14865 IPR006197 Peptidase S24, LexA-like JHS88_14865 IPR006199 LexA repressor, DNA-binding domain JHS88_14865 IPR036286 LexA/Signal peptidase-like superfamily JHS88_14865 IPR006200 Transcription regulator LexA JHS88_14865 IPR039418 LexA-like JHS88_14870 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase JHS88_14870 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB JHS88_14870 IPR002123 Phospholipid/glycerol acyltransferase JHS88_14870 IPR041728 GPAT/DHAPAT, acyltransferase domain JHS88_14875 IPR006370 4-hydroxybenzoate polyprenyltransferase-like JHS88_14875 IPR039653 Prenyltransferase JHS88_14875 IPR000537 UbiA prenyltransferase family JHS88_14880 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily JHS88_14880 IPR007440 Chorismate--pyruvate lyase JHS88_14885 IPR005503 Flagellar basal body-associated protein FliL JHS88_14890 IPR022764 Peptidase S54, rhomboid domain JHS88_14890 IPR035952 Rhomboid-like superfamily JHS88_14890 IPR023662 Rhomboid protease GlpG JHS88_14890 IPR038236 GlpG peptidase, N-terminal domain superfamily JHS88_14890 IPR022732 Peptidase S54, GlpG peptidase, N-terminal JHS88_14895 IPR001763 Rhodanese-like domain JHS88_14895 IPR036873 Rhodanese-like domain superfamily JHS88_14895 IPR023695 Thiosulfate sulfurtransferase, bacterial JHS88_14900 IPR000943 RNA polymerase sigma-70 JHS88_14900 IPR014284 RNA polymerase sigma-70 like domain JHS88_14900 IPR009042 RNA polymerase sigma-70 region 1.2 JHS88_14900 IPR007627 RNA polymerase sigma-70 region 2 JHS88_14900 IPR007630 RNA polymerase sigma-70 region 4 JHS88_14900 IPR013325 RNA polymerase sigma factor, region 2 JHS88_14900 IPR013324 RNA polymerase sigma factor, region 3/4-like JHS88_14900 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria JHS88_14905 IPR004513 Cell division protein FtsX JHS88_14905 IPR040690 FtsX, extracellular domain JHS88_14910 IPR005286 Cell division protein FtsE, ATP-binding JHS88_14910 IPR003593 AAA+ ATPase domain JHS88_14910 IPR003439 ABC transporter-like JHS88_14910 IPR017871 ABC transporter, conserved site JHS88_14910 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_14915 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily JHS88_14915 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain JHS88_14915 IPR036225 SRP/SRP receptor, N-terminal JHS88_14915 IPR004390 Signal-recognition particle receptor FtsY JHS88_14915 IPR013822 Signal recognition particle SRP54, helical bundle JHS88_14915 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_14915 IPR003593 AAA+ ATPase domain JHS88_14920 IPR004398 RNA methyltransferase, RsmD JHS88_14920 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_14920 IPR002052 DNA methylase, N-6 adenine-specific, conserved site JHS88_14930 IPR002771 Multiple antibiotic resistance (MarC)-related JHS88_14975 IPR036291 NAD(P)-binding domain superfamily JHS88_14975 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I JHS88_14975 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain JHS88_14975 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain JHS88_14975 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site JHS88_14975 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family JHS88_14980 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_14980 IPR001845 HTH ArsR-type DNA-binding domain JHS88_14980 IPR011991 ArsR-like helix-turn-helix domain JHS88_14980 IPR036390 Winged helix DNA-binding domain superfamily JHS88_14985 IPR035919 EAL domain superfamily JHS88_14985 IPR013976 Metal-dependent hydrolase HDOD JHS88_14985 IPR001633 EAL domain JHS88_14985 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing JHS88_14990 IPR001123 Amino acid exporter protein, LeuE-type JHS88_14995 IPR029058 Alpha/Beta hydrolase fold JHS88_14995 IPR022742 Serine aminopeptidase, S33 JHS88_15000 IPR000150 Cof family JHS88_15000 IPR036412 HAD-like superfamily JHS88_15000 IPR006379 HAD-superfamily hydrolase, subfamily IIB JHS88_15000 IPR023214 HAD superfamily JHS88_15015 IPR005636 DTW JHS88_15015 IPR039262 DTW domain-containing protein 2 JHS88_15020 IPR029787 Nucleotide cyclase JHS88_15020 IPR001633 EAL domain JHS88_15020 IPR035919 EAL domain superfamily JHS88_15020 IPR019494 FIST, C-domain JHS88_15020 IPR013702 FIST domain, N-terminal JHS88_15020 IPR000160 GGDEF domain JHS88_15025 IPR041492 Haloacid dehalogenase-like hydrolase JHS88_15025 IPR036412 HAD-like superfamily JHS88_15025 IPR006439 HAD hydrolase, subfamily IA JHS88_15025 IPR023214 HAD superfamily JHS88_15030 IPR011010 DNA breaking-rejoining enzyme, catalytic core JHS88_15030 IPR013762 Integrase-like, catalytic domain superfamily JHS88_15030 IPR002104 Integrase, catalytic domain JHS88_15030 IPR010998 Integrase/recombinase, N-terminal JHS88_15030 IPR023009 Tyrosine recombinase XerC/XerD JHS88_15030 IPR011931 Tyrosine recombinase XerC JHS88_15030 IPR004107 Integrase, SAM-like, N-terminal JHS88_15040 IPR001653 Diaminopimelate epimerase, DapF JHS88_15040 IPR018510 Diaminopimelate epimerase, active site JHS88_15045 IPR029066 PLP-binding barrel JHS88_15045 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site JHS88_15045 IPR002986 Diaminopimelate decarboxylase, LysA JHS88_15045 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal JHS88_15045 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site JHS88_15045 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal JHS88_15045 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal JHS88_15045 IPR000183 Ornithine/DAP/Arg decarboxylase JHS88_15055 IPR020895 Frataxin conserved site JHS88_15055 IPR002908 Frataxin/CyaY JHS88_15055 IPR036524 Frataxin/CyaY superfamily JHS88_15060 IPR024685 Adenylate cyclase class-I, N-terminal domain JHS88_15060 IPR024686 Adenylate cyclase class-I, conserved site JHS88_15060 IPR000274 Adenylate cyclase, class-I JHS88_15065 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily JHS88_15065 IPR022418 Porphobilinogen deaminase, C-terminal JHS88_15065 IPR022417 Porphobilinogen deaminase, N-terminal JHS88_15065 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site JHS88_15065 IPR000860 Porphobilinogen deaminase JHS88_15070 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase JHS88_15070 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily JHS88_15070 IPR039793 Uroporphyrinogen-III synthase JHS88_15075 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX JHS88_15080 IPR005254 Heme biosynthesis-associated TPR protein JHS88_15080 IPR010817 HemY, N-terminal JHS88_15080 IPR011990 Tetratricopeptide-like helical domain superfamily JHS88_15120 IPR017938 Riboflavin synthase-like beta-barrel JHS88_15120 IPR001433 Oxidoreductase FAD/NAD(P)-binding JHS88_15120 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JHS88_15120 IPR017927 FAD-binding domain, ferredoxin reductase-type JHS88_15125 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria JHS88_15125 IPR012675 Beta-grasp domain superfamily JHS88_15125 IPR018298 Adrenodoxin, iron-sulphur binding site JHS88_15125 IPR001055 Adrenodoxin JHS88_15125 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain JHS88_15125 IPR036010 2Fe-2S ferredoxin-like superfamily JHS88_15130 IPR002830 UbiD decarboxylyase family JHS88_15140 IPR041703 Transcription termination factor Rho, ATP binding domain JHS88_15140 IPR003593 AAA+ ATPase domain JHS88_15140 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain JHS88_15140 IPR011129 Cold shock domain JHS88_15140 IPR012340 Nucleic acid-binding, OB-fold JHS88_15140 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_15140 IPR011112 Rho termination factor, N-terminal JHS88_15140 IPR036269 Rho termination factor, N-terminal domain superfamily JHS88_15140 IPR011113 Rho termination factor, RNA-binding domain JHS88_15140 IPR004665 Transcription termination factor Rho JHS88_15145 IPR036249 Thioredoxin-like superfamily JHS88_15145 IPR013766 Thioredoxin domain JHS88_15145 IPR017937 Thioredoxin, conserved site JHS88_15145 IPR005746 Thioredoxin JHS88_15150 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site JHS88_15150 IPR014001 Helicase superfamily 1/2, ATP-binding domain JHS88_15150 IPR001650 Helicase, C-terminal JHS88_15150 IPR014014 RNA helicase, DEAD-box type, Q motif JHS88_15150 IPR023554 ATP-dependent RNA helicase RhlB type JHS88_15150 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_15150 IPR011545 DEAD/DEAH box helicase domain JHS88_15155 IPR030673 Pyrophosphatase, GppA/Ppx-type JHS88_15155 IPR003695 Ppx/GppA phosphatase JHS88_15155 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase JHS88_15160 IPR003744 Queuosine precursor transporter JHS88_15170 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_15170 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain JHS88_15170 IPR011545 DEAD/DEAH box helicase domain JHS88_15170 IPR004589 DNA helicase, ATP-dependent, RecQ type JHS88_15170 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial JHS88_15170 IPR014001 Helicase superfamily 1/2, ATP-binding domain JHS88_15170 IPR001650 Helicase, C-terminal JHS88_15170 IPR010997 HRDC-like superfamily JHS88_15170 IPR002121 HRDC domain JHS88_15170 IPR018982 RQC domain JHS88_15170 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_15205 IPR004473 Restriction endonuclease, type I, HsdR JHS88_15205 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal JHS88_15205 IPR022625 Type-1 restriction enzyme R protein, C-terminal JHS88_15205 IPR014001 Helicase superfamily 1/2, ATP-binding domain JHS88_15205 IPR040980 SWI2/SNF2 ATPase JHS88_15205 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_15210 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_15215 IPR000055 Restriction endonuclease, type I, HsdS JHS88_15220 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily JHS88_15220 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_15220 IPR004546 Restriction endonuclease, type I, HsdM JHS88_15220 IPR002052 DNA methylase, N-6 adenine-specific, conserved site JHS88_15220 IPR003356 DNA methylase, adenine-specific JHS88_15220 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain JHS88_15235 IPR004626 RarD protein JHS88_15235 IPR000620 EamA domain JHS88_15270 IPR025668 Transposase DDE domain JHS88_15295 IPR001123 Amino acid exporter protein, LeuE-type JHS88_15295 IPR004778 Homoserine/Threonine efflux protein JHS88_15300 IPR029055 Nucleophile aminohydrolases, N-terminal JHS88_15300 IPR000101 Gamma-glutamyltranspeptidase JHS88_15305 IPR014016 UvrD-like helicase, ATP-binding domain JHS88_15305 IPR005753 DNA helicase, ATP-dependent, UvrD type JHS88_15305 IPR013986 DExx box DNA helicase domain superfamily JHS88_15305 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_15305 IPR014017 UvrD-like DNA helicase, C-terminal JHS88_15305 IPR000212 DNA helicase, UvrD/REP type JHS88_15305 IPR034739 UvrD/AddA helicase, N-terminal JHS88_15315 IPR007801 Uncharacterised protein family UPF0276 JHS88_15315 IPR036237 Xylose isomerase-like superfamily JHS88_15335 IPR011701 Major facilitator superfamily JHS88_15335 IPR020846 Major facilitator superfamily domain JHS88_15335 IPR036259 MFS transporter superfamily JHS88_15335 IPR023697 Multidrug resistance protein MdtL JHS88_15340 IPR037402 HTH-type transcriptional regulator YidZ, PBP2 domain JHS88_15340 IPR036390 Winged helix DNA-binding domain superfamily JHS88_15340 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_15340 IPR023746 Transcription regulator HTH, YidZ JHS88_15340 IPR005119 LysR, substrate-binding JHS88_15340 IPR000847 Transcription regulator HTH, LysR JHS88_15345 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site JHS88_15345 IPR000587 Creatinase, N-terminal JHS88_15345 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal JHS88_15345 IPR036005 Creatinase/aminopeptidase-like JHS88_15345 IPR000994 Peptidase M24 JHS88_15345 IPR001714 Peptidase M24, methionine aminopeptidase JHS88_15345 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site JHS88_15345 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal JHS88_15345 IPR036005 Creatinase/aminopeptidase-like JHS88_15345 IPR000587 Creatinase, N-terminal JHS88_15345 IPR001714 Peptidase M24, methionine aminopeptidase JHS88_15345 IPR000994 Peptidase M24 JHS88_15350 IPR013785 Aldolase-type TIM barrel JHS88_15350 IPR010722 Biotin and thiamin synthesis-associated domain JHS88_15350 IPR007197 Radical SAM JHS88_15350 IPR012726 Thiazole biosynthesis ThiH JHS88_15350 IPR034428 ThiH/NocL/HydG-like JHS88_15355 IPR033983 Thiazole synthase ThiG JHS88_15355 IPR013785 Aldolase-type TIM barrel JHS88_15355 IPR008867 Thiazole synthase JHS88_15360 IPR010035 ThiS, thiamine-biosynthesis JHS88_15360 IPR003749 Sulfur carrier ThiS/MoaD-like JHS88_15360 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp JHS88_15360 IPR012675 Beta-grasp domain superfamily JHS88_15365 IPR035985 Ubiquitin-activating enzyme JHS88_15365 IPR000594 THIF-type NAD/FAD binding fold JHS88_15365 IPR012731 Thiazole biosynthesis adenylyltransferase ThiF JHS88_15370 IPR034291 Thiamine phosphate synthase JHS88_15370 IPR022998 Thiamine phosphate synthase/TenI JHS88_15370 IPR036206 Thiamin phosphate synthase superfamily JHS88_15370 IPR013785 Aldolase-type TIM barrel JHS88_15375 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B JHS88_15375 IPR038521 ThiC/Bza superfamily JHS88_15375 IPR037509 Phosphomethylpyrimidine synthase JHS88_15375 IPR025747 ThiC-associated domain JHS88_15380 IPR003691 Putative fluoride ion transporter CrcB JHS88_15435 IPR001451 Hexapeptide repeat JHS88_15435 IPR011004 Trimeric LpxA-like superfamily JHS88_15440 IPR009962 Protein of unknown function DUF1488 JHS88_15440 IPR036692 Shew3726-like superfamily JHS88_15445 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal JHS88_15445 IPR011342 Shikimate dehydrogenase JHS88_15445 IPR041121 SDH, C-terminal JHS88_15445 IPR036291 NAD(P)-binding domain superfamily JHS88_15445 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase JHS88_15445 IPR022893 Shikimate dehydrogenase family JHS88_15450 IPR001260 Coproporphyrinogen III oxidase, aerobic JHS88_15450 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily JHS88_15450 IPR018375 Coproporphyrinogen III oxidase, conserved site JHS88_15455 IPR006070 YrdC-like domain JHS88_15455 IPR023535 Threonylcarbamoyl-AMP synthase JHS88_15455 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily JHS88_15460 IPR035893 PurE domain superfamily JHS88_15460 IPR024694 PurE, prokaryotic type JHS88_15460 IPR000031 PurE domain JHS88_15460 IPR033747 Class I PurE JHS88_15465 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain JHS88_15465 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit JHS88_15465 IPR016185 Pre-ATP-grasp domain superfamily JHS88_15465 IPR013815 ATP-grasp fold, subdomain 1 JHS88_15465 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type JHS88_15465 IPR011761 ATP-grasp fold JHS88_15465 IPR011054 Rudiment single hybrid motif JHS88_15470 IPR000380 DNA topoisomerase, type IA JHS88_15470 IPR013498 DNA topoisomerase, type IA, zn finger JHS88_15475 IPR007456 Smg JHS88_15480 IPR041614 DprA, winged helix domain JHS88_15480 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_15480 IPR003488 DNA recombination-mediator protein A JHS88_15490 IPR036821 Peptide deformylase superfamily JHS88_15490 IPR023635 Peptide deformylase JHS88_15495 IPR005794 Methionyl-tRNA formyltransferase JHS88_15495 IPR005793 Formyl transferase, C-terminal JHS88_15495 IPR037022 Formyl transferase, C-terminal domain superfamily JHS88_15495 IPR002376 Formyl transferase, N-terminal JHS88_15495 IPR036477 Formyl transferase, N-terminal domain superfamily JHS88_15495 IPR011034 Formyl transferase-like, C-terminal domain superfamily JHS88_15495 IPR001555 Phosphoribosylglycinamide formyltransferase, active site JHS88_15495 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain JHS88_15500 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site JHS88_15500 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type JHS88_15500 IPR004573 rRNA small subunit methyltransferase B JHS88_15500 IPR023267 RNA (C5-cytosine) methyltransferase JHS88_15500 IPR006027 NusB/RsmB/TIM44 JHS88_15500 IPR035926 NusB-like superfamily JHS88_15500 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_15505 IPR006036 Potassium uptake protein TrkA JHS88_15505 IPR036291 NAD(P)-binding domain superfamily JHS88_15505 IPR006037 Regulator of K+ conductance, C-terminal JHS88_15505 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily JHS88_15505 IPR003148 Regulator of K+ conductance, N-terminal JHS88_15510 IPR003445 Cation transporter JHS88_15510 IPR004772 TrkH potassium transport family JHS88_15520 IPR005744 Hly-III JHS88_15520 IPR004254 AdipoR/Haemolysin-III-related JHS88_15525 IPR014752 Arrestin, C-terminal JHS88_15525 IPR014756 Immunoglobulin E-set JHS88_15525 IPR009776 Sporulation stage 0, protein M JHS88_15535 IPR009383 Protein of unknown function DUF1040 JHS88_15535 IPR038134 YihD-like superfamily JHS88_15540 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JHS88_15540 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JHS88_15540 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG JHS88_15540 IPR032879 FixG, C-terminal immunoglobulin-like domain JHS88_15540 IPR013783 Immunoglobulin-like fold JHS88_15545 IPR032882 SrkA/RdoA protein kinase JHS88_15545 IPR002575 Aminoglycoside phosphotransferase JHS88_15545 IPR011009 Protein kinase-like domain superfamily JHS88_15550 IPR036249 Thioredoxin-like superfamily JHS88_15550 IPR001853 DSBA-like thioredoxin domain JHS88_15550 IPR013766 Thioredoxin domain JHS88_15550 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL JHS88_15555 IPR002123 Phospholipid/glycerol acyltransferase JHS88_15565 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JHS88_15565 IPR020568 Ribosomal protein S5 domain 2-type fold JHS88_15565 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_15565 IPR000523 Magnesium chelatase ChlI domain JHS88_15565 IPR025158 Mg chelatase-related protein, C-terminal domain JHS88_15565 IPR001208 MCM domain JHS88_15565 IPR003593 AAA+ ATPase domain JHS88_15565 IPR004482 Mg chelatase-related protein JHS88_15570 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding JHS88_15570 IPR000399 TPP-binding enzyme, conserved site JHS88_15570 IPR012000 Thiamine pyrophosphate enzyme, central domain JHS88_15570 IPR029061 Thiamin diphosphate-binding fold JHS88_15570 IPR029035 DHS-like NAD/FAD-binding domain superfamily JHS88_15570 IPR012846 Acetolactate synthase, large subunit, biosynthetic JHS88_15570 IPR039368 Acetolactate synthase large subunit, TPP binding domain JHS88_15570 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain JHS88_15575 IPR002912 ACT domain JHS88_15580 IPR033939 Branched-chain aminotransferase JHS88_15580 IPR036038 Aminotransferase-like, PLP-dependent enzymes JHS88_15580 IPR018300 Aminotransferase, class IV, conserved site JHS88_15580 IPR001544 Aminotransferase class IV JHS88_15580 IPR005785 Branched-chain amino acid aminotransferase I JHS88_15585 IPR042096 Dihydroxy-acid dehydratase, C-terminal JHS88_15585 IPR004404 Dihydroxy-acid dehydratase JHS88_15585 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase JHS88_15585 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site JHS88_15585 IPR037237 IlvD/EDD, N-terminal domain JHS88_15590 IPR005787 Threonine dehydratase, biosynthetic JHS88_15590 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme JHS88_15590 IPR001721 Threonine dehydratase, ACT-like domain JHS88_15590 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site JHS88_15590 IPR001926 Pyridoxal-phosphate dependent enzyme JHS88_15590 IPR038110 Threonine dehydratase, ACT-like domain superfamily JHS88_15595 IPR005119 LysR, substrate-binding JHS88_15595 IPR000847 Transcription regulator HTH, LysR JHS88_15595 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_15595 IPR036390 Winged helix DNA-binding domain superfamily JHS88_15600 IPR004812 Drug resistance transporter Bcr/CmlA subfamily JHS88_15600 IPR011701 Major facilitator superfamily JHS88_15600 IPR020846 Major facilitator superfamily domain JHS88_15600 IPR036259 MFS transporter superfamily JHS88_15610 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JHS88_15610 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain JHS88_15610 IPR035906 MetI-like superfamily JHS88_15615 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase JHS88_15615 IPR038009 GlmU, C-terminal LbH domain JHS88_15615 IPR001451 Hexapeptide repeat JHS88_15615 IPR018357 Hexapeptide transferase, conserved site JHS88_15615 IPR025877 MobA-like NTP transferase JHS88_15615 IPR029044 Nucleotide-diphospho-sugar transferases JHS88_15615 IPR011004 Trimeric LpxA-like superfamily JHS88_15620 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal JHS88_15620 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal JHS88_15620 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit JHS88_15620 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily JHS88_15620 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain JHS88_15625 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site JHS88_15625 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain JHS88_15625 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily JHS88_15625 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain JHS88_15625 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal JHS88_15625 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_15625 IPR005722 ATP synthase, F1 complex, beta subunit JHS88_15625 IPR003593 AAA+ ATPase domain JHS88_15630 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site JHS88_15630 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily JHS88_15630 IPR000131 ATP synthase, F1 complex, gamma subunit JHS88_15635 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily JHS88_15635 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily JHS88_15635 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain JHS88_15635 IPR005294 ATP synthase, F1 complex, alpha subunit JHS88_15635 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site JHS88_15635 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain JHS88_15635 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily JHS88_15635 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain JHS88_15635 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_15635 IPR000793 ATP synthase, alpha subunit, C-terminal JHS88_15640 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily JHS88_15640 IPR000711 ATPase, OSCP/delta subunit JHS88_15640 IPR020781 ATPase, OSCP/delta subunit, conserved site JHS88_15645 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily JHS88_15645 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast JHS88_15645 IPR005864 ATP synthase, F0 complex, subunit b, bacterial JHS88_15650 IPR035921 F/V-ATP synthase subunit C superfamily JHS88_15650 IPR002379 V-ATPase proteolipid subunit C-like domain JHS88_15650 IPR038662 F1F0 ATP synthase subunit C superfamily JHS88_15650 IPR000454 ATP synthase, F0 complex, subunit C JHS88_15650 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast JHS88_15650 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site JHS88_15655 IPR000568 ATP synthase, F0 complex, subunit A JHS88_15655 IPR023011 ATP synthase, F0 complex, subunit A, active site JHS88_15655 IPR035908 ATP synthase, F0 complex, subunit A superfamily JHS88_15660 IPR005598 ATP synthase protein I JHS88_15665 IPR036086 ParB/Sulfiredoxin superfamily JHS88_15665 IPR003115 ParB/Sulfiredoxin JHS88_15665 IPR041468 ParB/Spo0J, HTH domain JHS88_15665 IPR004437 ParB/RepB/Spo0J partition protein JHS88_15670 IPR025669 AAA domain JHS88_15670 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_15675 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_15675 IPR003682 rRNA small subunit methyltransferase G JHS88_15680 IPR020595 MnmG-related, conserved site JHS88_15680 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG JHS88_15680 IPR026904 GidA associated domain 3 JHS88_15680 IPR036188 FAD/NAD(P)-binding domain superfamily JHS88_15680 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related JHS88_15685 IPR008254 Flavodoxin/nitric oxide synthase JHS88_15685 IPR029039 Flavoprotein-like superfamily JHS88_15690 IPR004520 tRNA modification GTPase MnmE JHS88_15690 IPR027368 tRNA modification GTPase MnmE domain 2 JHS88_15690 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 JHS88_15690 IPR006073 GTP binding domain JHS88_15690 IPR025867 MnmE, helical domain JHS88_15690 IPR018948 GTP-binding protein TrmE, N-terminal JHS88_15690 IPR005225 Small GTP-binding protein domain JHS88_15690 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_15690 IPR031168 TrmE-type guanine nucleotide-binding domain JHS88_15695 IPR019998 Membrane insertase YidC JHS88_15695 IPR038221 YidC, periplasmic domain superfamily JHS88_15695 IPR038210 Membrane insertase YidC, periplasmic domain JHS88_15695 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 JHS88_15695 IPR028055 Membrane insertase YidC/Oxa1, C-terminal JHS88_15695 IPR028053 Membrane insertase YidC, N-terminal JHS88_15700 IPR002696 Putative membrane protein insertion efficiency factor JHS88_15705 IPR020568 Ribosomal protein S5 domain 2-type fold JHS88_15705 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JHS88_15705 IPR000100 Ribonuclease P JHS88_15705 IPR020539 Ribonuclease P, conserved site JHS88_15710 IPR000271 Ribosomal protein L34 JHS88_15710 IPR020939 Ribosomal protein L34, conserved site JHS88_15715 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_15715 IPR017871 ABC transporter, conserved site JHS88_15715 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type JHS88_15715 IPR003593 AAA+ ATPase domain JHS88_15715 IPR003439 ABC transporter-like JHS88_15720 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain JHS88_15720 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JHS88_15720 IPR035906 MetI-like superfamily JHS88_15725 IPR001320 Ionotropic glutamate receptor JHS88_15725 IPR018313 Solute-binding protein family 3, conserved site JHS88_15725 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JHS88_15755 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent JHS88_15755 IPR000262 FMN-dependent dehydrogenase JHS88_15755 IPR037396 FMN hydroxy acid dehydrogenase domain JHS88_15755 IPR013785 Aldolase-type TIM barrel JHS88_15755 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site JHS88_15755 IPR020920 L-lactate dehydrogenase, bacterial JHS88_15765 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_15765 IPR036390 Winged helix DNA-binding domain superfamily JHS88_15765 IPR005119 LysR, substrate-binding JHS88_15765 IPR000847 Transcription regulator HTH, LysR JHS88_15775 IPR003593 AAA+ ATPase domain JHS88_15775 IPR003439 ABC transporter-like JHS88_15775 IPR017871 ABC transporter, conserved site JHS88_15775 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_15775 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal JHS88_15785 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JHS88_15785 IPR041699 Lon protease, AAA domain JHS88_15785 IPR008269 Peptidase S16, Lon proteolytic domain JHS88_15785 IPR027065 Lon protease JHS88_15785 IPR020568 Ribosomal protein S5 domain 2-type fold JHS88_15790 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JHS88_15790 IPR003660 HAMP domain JHS88_15790 IPR004090 Chemotaxis methyl-accepting receptor JHS88_15795 IPR012349 FMN-binding split barrel JHS88_15795 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal JHS88_15795 IPR009875 PilZ domain JHS88_15810 IPR016181 Acyl-CoA N-acyltransferase JHS88_15810 IPR000182 GNAT domain JHS88_15815 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JHS88_15815 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JHS88_15815 IPR004494 MauM/NapG ferredoxin-type protein JHS88_15815 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal JHS88_15820 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JHS88_15820 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JHS88_15820 IPR011886 Ferredoxin-type protein, NapH/MauN family JHS88_15835 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_15835 IPR017871 ABC transporter, conserved site JHS88_15835 IPR022216 Putative ABC cobalt transporter JHS88_15835 IPR003439 ABC transporter-like JHS88_15835 IPR003593 AAA+ ATPase domain JHS88_15840 IPR022914 Protein of unknown function UPF0397 JHS88_15840 IPR009825 ECF transporter, substrate-specific component-like JHS88_15845 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain JHS88_15850 IPR011223 Uncharacterised conserved protein UCP028770 JHS88_15855 IPR000160 GGDEF domain JHS88_15855 IPR029787 Nucleotide cyclase JHS88_15870 IPR004402 Purine nucleoside phosphorylase DeoD-type JHS88_15870 IPR000845 Nucleoside phosphorylase domain JHS88_15870 IPR035994 Nucleoside phosphorylase superfamily JHS88_15875 IPR013560 Domain of unknown function DUF1722 JHS88_15880 IPR009061 Putative DNA-binding domain superfamily JHS88_15880 IPR000551 MerR-type HTH domain JHS88_15885 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily JHS88_15885 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily JHS88_15885 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain JHS88_15885 IPR002081 Cryptochrome/DNA photolyase class 1 JHS88_15885 IPR006050 DNA photolyase, N-terminal JHS88_15885 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JHS88_15885 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal JHS88_15890 IPR005490 L,D-transpeptidase catalytic domain JHS88_15890 IPR041597 L,D-transpeptidase C-terminal domain JHS88_15890 IPR018392 LysM domain JHS88_15890 IPR038063 L,D-transpeptidase catalytic domain-like JHS88_15900 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site JHS88_15900 IPR001650 Helicase, C-terminal JHS88_15900 IPR014001 Helicase superfamily 1/2, ATP-binding domain JHS88_15900 IPR028621 ATP-dependent RNA helicase SrmB JHS88_15900 IPR011545 DEAD/DEAH box helicase domain JHS88_15900 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_15900 IPR014014 RNA helicase, DEAD-box type, Q motif JHS88_15905 IPR002470 Peptidase S9A, prolyl oligopeptidase JHS88_15905 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain JHS88_15905 IPR023302 Peptidase S9A, N-terminal domain JHS88_15905 IPR002471 Peptidase S9, serine active site JHS88_15905 IPR029058 Alpha/Beta hydrolase fold JHS88_15910 IPR037066 TonB-dependent receptor, plug domain superfamily JHS88_15910 IPR000531 TonB-dependent receptor-like, beta-barrel JHS88_15910 IPR010916 TonB box, conserved site JHS88_15910 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily JHS88_15910 IPR010917 TonB-dependent receptor, conserved site JHS88_15910 IPR039426 Vitamin B12 transporter BtuB-like JHS88_15910 IPR012910 TonB-dependent receptor, plug domain JHS88_15930 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JHS88_15930 IPR004090 Chemotaxis methyl-accepting receptor JHS88_15930 IPR003660 HAMP domain JHS88_15935 IPR024370 PBP domain JHS88_15940 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JHS88_15940 IPR035906 MetI-like superfamily JHS88_15940 IPR011864 Phosphate ABC transporter, permease protein PstC JHS88_15945 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JHS88_15945 IPR035906 MetI-like superfamily JHS88_15945 IPR005672 Phosphate transport system permease protein PstA JHS88_15950 IPR003439 ABC transporter-like JHS88_15950 IPR003593 AAA+ ATPase domain JHS88_15950 IPR005670 Phosphate transport system permease protein 1 JHS88_15950 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_15950 IPR015850 ABC transporter, phosphate import, PstB JHS88_15950 IPR017871 ABC transporter, conserved site JHS88_15965 IPR036465 von Willebrand factor A-like domain superfamily JHS88_15965 IPR002035 von Willebrand factor, type A JHS88_15965 IPR022933 Uncharacterised protein family UPF0353 JHS88_15970 IPR036465 von Willebrand factor A-like domain superfamily JHS88_15970 IPR022933 Uncharacterised protein family UPF0353 JHS88_15970 IPR002035 von Willebrand factor, type A JHS88_15980 IPR036465 von Willebrand factor A-like domain superfamily JHS88_15980 IPR002881 Domain of unknown function DUF58 JHS88_15985 IPR041628 ChlI/MoxR, AAA lid domain JHS88_15985 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_15985 IPR011703 ATPase, AAA-3 JHS88_15990 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JHS88_15990 IPR003660 HAMP domain JHS88_15990 IPR033479 Double Cache domain 1 JHS88_16000 IPR016032 Signal transduction response regulator, C-terminal effector JHS88_16000 IPR000792 Transcription regulator LuxR, C-terminal JHS88_16000 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_16005 IPR000792 Transcription regulator LuxR, C-terminal JHS88_16005 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_16005 IPR016032 Signal transduction response regulator, C-terminal effector JHS88_16015 IPR003593 AAA+ ATPase domain JHS88_16015 IPR011527 ABC transporter type 1, transmembrane domain JHS88_16015 IPR036640 ABC transporter type 1, transmembrane domain superfamily JHS88_16015 IPR003439 ABC transporter-like JHS88_16015 IPR017871 ABC transporter, conserved site JHS88_16015 IPR010128 ATPase, type I secretion system, PrtD JHS88_16015 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_16020 IPR010129 Type I secretion membrane fusion protein, HlyD family JHS88_16020 IPR006144 Secretion protein HlyD, conserved site JHS88_16035 IPR010982 Lambda repressor-like, DNA-binding domain superfamily JHS88_16035 IPR038722 Ner, winged helix-turn-helix DNA-binding domain JHS88_16090 IPR032710 NTF2-like domain superfamily JHS88_16090 IPR004027 SEC-C motif JHS88_16090 IPR023006 Uncharacterised protein family UPF0225 JHS88_16250 IPR002941 DNA methylase N-4/N-6 JHS88_16250 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site JHS88_16250 IPR001091 Restriction/modification DNA-methylase JHS88_16250 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_16280 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel JHS88_16280 IPR006664 Outer membrane protein, bacterial JHS88_16280 IPR002368 Outer membrane protein, OmpA JHS88_16280 IPR006665 OmpA-like domain JHS88_16280 IPR006690 Outer membrane protein, OmpA-like, conserved site JHS88_16280 IPR036737 OmpA-like domain superfamily JHS88_16280 IPR000498 Outer membrane protein OmpA-like, transmembrane domain JHS88_16290 IPR037294 ABC transporter, BtuC-like JHS88_16290 IPR000522 ABC transporter, permease protein, BtuC-like JHS88_16295 IPR002491 ABC transporter periplasmic binding domain JHS88_16300 IPR003439 ABC transporter-like JHS88_16300 IPR017871 ABC transporter, conserved site JHS88_16300 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_16300 IPR003593 AAA+ ATPase domain JHS88_16305 IPR012910 TonB-dependent receptor, plug domain JHS88_16305 IPR037066 TonB-dependent receptor, plug domain superfamily JHS88_16305 IPR039423 TonB-dependent receptor-like JHS88_16305 IPR000531 TonB-dependent receptor-like, beta-barrel JHS88_16305 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily JHS88_16305 IPR010917 TonB-dependent receptor, conserved site JHS88_16305 IPR010105 TonB-dependent siderophore receptor JHS88_16310 IPR039421 Type I protein exporter JHS88_16310 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_16310 IPR003439 ABC transporter-like JHS88_16310 IPR036640 ABC transporter type 1, transmembrane domain superfamily JHS88_16310 IPR011527 ABC transporter type 1, transmembrane domain JHS88_16310 IPR003593 AAA+ ATPase domain JHS88_16310 IPR017871 ABC transporter, conserved site JHS88_16315 IPR005467 Histidine kinase domain JHS88_16315 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal JHS88_16315 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JHS88_16315 IPR025201 Sensor protein KdpD, transmembrane domain JHS88_16315 IPR038318 KdpD, transmembrane domain superfamily JHS88_16315 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JHS88_16315 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JHS88_16315 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_16315 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JHS88_16315 IPR029016 GAF-like domain superfamily JHS88_16315 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_16315 IPR029016 GAF-like domain superfamily JHS88_16315 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_16315 IPR005467 Histidine kinase domain JHS88_16315 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_16315 IPR038318 KdpD, transmembrane domain superfamily JHS88_16315 IPR025201 Sensor protein KdpD, transmembrane domain JHS88_16315 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal JHS88_16315 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JHS88_16315 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JHS88_16320 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_16320 IPR011006 CheY-like superfamily JHS88_16320 IPR001867 OmpR/PhoB-type DNA-binding domain JHS88_16320 IPR001789 Signal transduction response regulator, receiver domain JHS88_16320 IPR039420 Transcriptional regulatory protein WalR-like JHS88_16325 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily JHS88_16325 IPR006037 Regulator of K+ conductance, C-terminal JHS88_16325 IPR036291 NAD(P)-binding domain superfamily JHS88_16325 IPR003148 Regulator of K+ conductance, N-terminal JHS88_16330 IPR003445 Cation transporter JHS88_16330 IPR004772 TrkH potassium transport family JHS88_16335 IPR035965 PAS domain superfamily JHS88_16335 IPR035919 EAL domain superfamily JHS88_16335 IPR001633 EAL domain JHS88_16335 IPR029787 Nucleotide cyclase JHS88_16335 IPR000160 GGDEF domain JHS88_16335 IPR005330 MHYT domain JHS88_16340 IPR014068 Azurin JHS88_16340 IPR000923 Blue (type 1) copper domain JHS88_16340 IPR028871 Blue (type 1) copper protein, binding site JHS88_16340 IPR008972 Cupredoxin JHS88_16345 IPR006439 HAD hydrolase, subfamily IA JHS88_16345 IPR023198 Phosphoglycolate phosphatase-like, domain 2 JHS88_16345 IPR023214 HAD superfamily JHS88_16345 IPR041492 Haloacid dehalogenase-like hydrolase JHS88_16345 IPR036412 HAD-like superfamily JHS88_16355 IPR001250 Mannose-6-phosphate isomerase, type I JHS88_16355 IPR011051 RmlC-like cupin domain superfamily JHS88_16355 IPR018050 Phosphomannose isomerase, type I, conserved site JHS88_16355 IPR014710 RmlC-like jelly roll fold JHS88_16355 IPR016305 Mannose-6-phosphate isomerase JHS88_16360 IPR006327 Phosphotransferase system, fructose IIC component JHS88_16360 IPR004715 Phosphotransferase system, IIA component fructose subfamily JHS88_16360 IPR013014 Phosphotransferase system, EIIC component, type 2 JHS88_16360 IPR003501 Phosphotransferase system, EIIB component, type 2/3 JHS88_16360 IPR013011 Phosphotransferase system, EIIB component, type 2 JHS88_16360 IPR036095 PTS system IIB component-like superfamily JHS88_16360 IPR002178 PTS EIIA type-2 domain JHS88_16360 IPR016152 Phosphotransferase/anion transporter JHS88_16360 IPR003353 Phosphotransferase system, fructose-specific IIB subunit JHS88_16365 IPR009057 Homeobox-like domain superfamily JHS88_16365 IPR018060 DNA binding HTH domain, AraC-type JHS88_16365 IPR018062 HTH domain AraC-type, conserved site JHS88_16365 IPR020449 Transcription regulator HTH, AraC- type JHS88_16375 IPR003353 Phosphotransferase system, fructose-specific IIB subunit JHS88_16375 IPR036095 PTS system IIB component-like superfamily JHS88_16375 IPR013011 Phosphotransferase system, EIIB component, type 2 JHS88_16375 IPR003501 Phosphotransferase system, EIIB component, type 2/3 JHS88_16380 IPR006327 Phosphotransferase system, fructose IIC component JHS88_16380 IPR013014 Phosphotransferase system, EIIC component, type 2 JHS88_16385 IPR036291 NAD(P)-binding domain superfamily JHS88_16385 IPR013328 6-phosphogluconate dehydrogenase, domain 2 JHS88_16385 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily JHS88_16385 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site JHS88_16385 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain JHS88_16385 IPR015815 3-hydroxyisobutyrate dehydrogenase-related JHS88_16385 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding JHS88_16390 IPR037060 Catalase core domain superfamily JHS88_16390 IPR002226 Catalase haem-binding site JHS88_16390 IPR011614 Catalase core domain JHS88_16390 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 JHS88_16390 IPR024708 Catalase active site JHS88_16390 IPR040333 Catalase, clade 3 JHS88_16390 IPR018028 Catalase, mono-functional, haem-containing JHS88_16390 IPR010582 Catalase immune-responsive domain JHS88_16390 IPR020835 Catalase superfamily JHS88_16395 IPR034330 Glutathione S-transferases, class Zeta , C-terminal JHS88_16395 IPR036282 Glutathione S-transferase, C-terminal domain superfamily JHS88_16395 IPR034333 Glutathione S-transferases, class Zeta , N-terminal JHS88_16395 IPR036249 Thioredoxin-like superfamily JHS88_16395 IPR010987 Glutathione S-transferase, C-terminal-like JHS88_16395 IPR040079 Glutathione Transferase family JHS88_16395 IPR004045 Glutathione S-transferase, N-terminal JHS88_16395 IPR005955 Glutathione S-transferases, class Zeta JHS88_16400 IPR036291 NAD(P)-binding domain superfamily JHS88_16400 IPR011032 GroES-like superfamily JHS88_16400 IPR041694 Oxidoreductase, N-terminal domain JHS88_16400 IPR013149 Alcohol dehydrogenase, C-terminal JHS88_16400 IPR020843 Polyketide synthase, enoylreductase domain JHS88_16405 IPR011075 Tetracyclin repressor-like, C-terminal domain JHS88_16405 IPR009057 Homeobox-like domain superfamily JHS88_16405 IPR001647 DNA-binding HTH domain, TetR-type JHS88_16405 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JHS88_16410 IPR015947 PUA-like superfamily JHS88_16410 IPR007374 ASCH domain JHS88_16410 IPR008314 Uncharacterised conserved protein UCP029143 JHS88_16440 IPR001296 Glycosyl transferase, family 1 JHS88_16440 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain JHS88_16450 IPR003856 Polysaccharide chain length determinant N-terminal domain JHS88_16450 IPR025669 AAA domain JHS88_16450 IPR005702 Exopolysaccharide synthesis protein JHS88_16450 IPR032807 Tyrosine kinase, G-rich domain JHS88_16450 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_16465 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ JHS88_16465 IPR003362 Bacterial sugar transferase JHS88_16465 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase JHS88_16470 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_16470 IPR003439 ABC transporter-like JHS88_16470 IPR003593 AAA+ ATPase domain JHS88_16470 IPR017871 ABC transporter, conserved site JHS88_16470 IPR013611 Transport-associated OB, type 2 JHS88_16470 IPR015855 ABC transporter, maltose/maltodextrin import, MalK JHS88_16470 IPR008995 Molybdate/tungstate binding, C-terminal JHS88_16475 IPR006059 Bacterial extracellular solute-binding protein JHS88_16475 IPR006061 Solute-binding family 1, conserved site JHS88_16475 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein JHS88_16480 IPR035906 MetI-like superfamily JHS88_16480 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JHS88_16480 IPR030156 Maltose/maltodextrin transport system permease protein MalF-like JHS88_16480 IPR035277 MalF, N-terminal JHS88_16480 IPR029345 Maltose transport system permease protein MalF, P2 domain JHS88_16485 IPR035906 MetI-like superfamily JHS88_16485 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JHS88_16520 IPR020904 Short-chain dehydrogenase/reductase, conserved site JHS88_16520 IPR002347 Short-chain dehydrogenase/reductase SDR JHS88_16520 IPR036291 NAD(P)-binding domain superfamily JHS88_16520 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase JHS88_16540 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal JHS88_16540 IPR024072 Dihydrofolate reductase-like domain superfamily JHS88_16545 IPR023772 DNA-binding HTH domain, TetR-type, conserved site JHS88_16545 IPR001647 DNA-binding HTH domain, TetR-type JHS88_16545 IPR004111 Tetracycline repressor TetR, C-terminal JHS88_16545 IPR003012 Tetracycline transcriptional regulator, TetR JHS88_16545 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JHS88_16545 IPR009057 Homeobox-like domain superfamily JHS88_16550 IPR036249 Thioredoxin-like superfamily JHS88_16550 IPR010987 Glutathione S-transferase, C-terminal-like JHS88_16550 IPR036282 Glutathione S-transferase, C-terminal domain superfamily JHS88_16550 IPR040079 Glutathione Transferase family JHS88_16550 IPR004045 Glutathione S-transferase, N-terminal JHS88_16555 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A JHS88_16555 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily JHS88_16555 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal JHS88_16555 IPR015956 Penicillin-binding protein, C-terminal domain superfamily JHS88_16555 IPR012338 Beta-lactamase/transpeptidase-like JHS88_16555 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal JHS88_16570 IPR013766 Thioredoxin domain JHS88_16570 IPR036249 Thioredoxin-like superfamily JHS88_16570 IPR013740 Redoxin JHS88_16570 IPR002109 Glutaredoxin JHS88_16570 IPR037944 Peroxiredoxin-5-like JHS88_16570 IPR011767 Glutaredoxin active site JHS88_16575 IPR001365 Adenosine/AMP deaminase domain JHS88_16575 IPR028892 Adenine deaminase type 2 JHS88_16575 IPR006330 Adenosine/adenine deaminase JHS88_16575 IPR032466 Metal-dependent hydrolase JHS88_16590 IPR002059 Cold-shock protein, DNA-binding JHS88_16590 IPR012156 Cold shock, CspA JHS88_16590 IPR011129 Cold shock domain JHS88_16590 IPR019844 Cold-shock (CSD) domain JHS88_16590 IPR012340 Nucleic acid-binding, OB-fold JHS88_16595 IPR012093 Pirin JHS88_16595 IPR008778 Pirin, C-terminal domain JHS88_16595 IPR014710 RmlC-like jelly roll fold JHS88_16595 IPR011051 RmlC-like cupin domain superfamily JHS88_16595 IPR003829 Pirin, N-terminal domain JHS88_16600 IPR037483 YjjU-like JHS88_16600 IPR002641 Patatin-like phospholipase domain JHS88_16600 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase JHS88_16610 IPR000835 MarR-type HTH domain JHS88_16610 IPR023187 Transcriptional regulator MarR-type, conserved site JHS88_16610 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_16610 IPR036390 Winged helix DNA-binding domain superfamily JHS88_16625 IPR011701 Major facilitator superfamily JHS88_16625 IPR020846 Major facilitator superfamily domain JHS88_16625 IPR036259 MFS transporter superfamily JHS88_16625 IPR004734 Multidrug resistance protein JHS88_16625 IPR005829 Sugar transporter, conserved site JHS88_16625 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG JHS88_16635 IPR000683 Oxidoreductase, N-terminal JHS88_16635 IPR036291 NAD(P)-binding domain superfamily JHS88_16640 IPR017850 Alkaline-phosphatase-like, core domain superfamily JHS88_16640 IPR012549 Phosphoethanolamine transferase, N-terminal JHS88_16640 IPR040423 Phosphoethanolamine transferase JHS88_16640 IPR000917 Sulfatase, N-terminal JHS88_16645 IPR033718 Diacylglycerol kinase, prokaryotic JHS88_16645 IPR036945 Diacylglycerol kinase (DAGK) superfamily JHS88_16645 IPR000829 DAGK family JHS88_16655 IPR003660 HAMP domain JHS88_16655 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_16655 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_16655 IPR005467 Histidine kinase domain JHS88_16655 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JHS88_16655 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JHS88_16655 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JHS88_16660 IPR016032 Signal transduction response regulator, C-terminal effector JHS88_16660 IPR001867 OmpR/PhoB-type DNA-binding domain JHS88_16660 IPR011006 CheY-like superfamily JHS88_16660 IPR039420 Transcriptional regulatory protein WalR-like JHS88_16660 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_16660 IPR001789 Signal transduction response regulator, receiver domain JHS88_16665 IPR002347 Short-chain dehydrogenase/reductase SDR JHS88_16665 IPR020904 Short-chain dehydrogenase/reductase, conserved site JHS88_16665 IPR036291 NAD(P)-binding domain superfamily JHS88_16680 IPR001853 DSBA-like thioredoxin domain JHS88_16680 IPR036249 Thioredoxin-like superfamily JHS88_16680 IPR013766 Thioredoxin domain JHS88_16680 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL JHS88_16695 IPR036249 Thioredoxin-like superfamily JHS88_16695 IPR029759 Glutathione peroxidase active site JHS88_16695 IPR000889 Glutathione peroxidase JHS88_16700 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily JHS88_16700 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB JHS88_16710 IPR023727 Lysophospholipid transporter LplT JHS88_16710 IPR011701 Major facilitator superfamily JHS88_16710 IPR036259 MFS transporter superfamily JHS88_16720 IPR006674 HD domain JHS88_16720 IPR003607 HD/PDEase domain JHS88_16730 IPR011059 Metal-dependent hydrolase, composite domain superfamily JHS88_16730 IPR032466 Metal-dependent hydrolase JHS88_16730 IPR013108 Amidohydrolase 3 JHS88_16735 IPR030191 Cytosine permease JHS88_16735 IPR001248 Purine-cytosine permease JHS88_16735 IPR038271 Purine-cytosine permease superfamily JHS88_16740 IPR000644 CBS domain JHS88_16740 IPR006668 Magnesium transporter, MgtE intracellular domain JHS88_16740 IPR038076 MgtE, N-terminal domain superfamily JHS88_16740 IPR038048 Magnesium transporter MgtE, transmembrane domain JHS88_16740 IPR006669 Magnesium transporter MgtE JHS88_16740 IPR006667 SLC41 divalent cation transporters, integral membrane domain JHS88_16740 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily JHS88_16745 IPR010232 Probable protein kinase UbiB JHS88_16745 IPR011009 Protein kinase-like domain superfamily JHS88_16745 IPR004147 UbiB domain JHS88_16745 IPR000719 Protein kinase domain JHS88_16750 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain JHS88_16760 IPR009057 Homeobox-like domain superfamily JHS88_16760 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal JHS88_16760 IPR018060 DNA binding HTH domain, AraC-type JHS88_16760 IPR020449 Transcription regulator HTH, AraC- type JHS88_16775 IPR011006 CheY-like superfamily JHS88_16775 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_16775 IPR039420 Transcriptional regulatory protein WalR-like JHS88_16775 IPR001789 Signal transduction response regulator, receiver domain JHS88_16775 IPR001867 OmpR/PhoB-type DNA-binding domain JHS88_16775 IPR016032 Signal transduction response regulator, C-terminal effector JHS88_16780 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JHS88_16780 IPR005467 Histidine kinase domain JHS88_16780 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_16780 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JHS88_16780 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JHS88_16780 IPR032404 Two-component sensor protein CpxA, periplasmic domain JHS88_16780 IPR038515 CpxA, periplasmic domain superfamily JHS88_16780 IPR003660 HAMP domain JHS88_16780 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_16790 IPR004839 Aminotransferase, class I/classII JHS88_16790 IPR036390 Winged helix DNA-binding domain superfamily JHS88_16790 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_16790 IPR000524 Transcription regulator HTH, GntR JHS88_16790 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JHS88_16790 IPR015424 Pyridoxal phosphate-dependent transferase JHS88_16795 IPR002293 Amino acid/polyamine transporter I JHS88_16800 IPR000485 AsnC-type HTH domain JHS88_16800 IPR019885 Transcription regulator HTH, AsnC-type, conserved site JHS88_16800 IPR036390 Winged helix DNA-binding domain superfamily JHS88_16800 IPR011991 ArsR-like helix-turn-helix domain JHS88_16800 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_16800 IPR011008 Dimeric alpha-beta barrel JHS88_16800 IPR019888 Transcription regulator AsnC-type JHS88_16800 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain JHS88_16805 IPR036390 Winged helix DNA-binding domain superfamily JHS88_16805 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_16805 IPR000847 Transcription regulator HTH, LysR JHS88_16805 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria JHS88_16805 IPR005119 LysR, substrate-binding JHS88_16805 IPR017685 HTH-type transcriptional regulator ArgP JHS88_16825 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain JHS88_16825 IPR036291 NAD(P)-binding domain superfamily JHS88_16825 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I JHS88_16825 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family JHS88_16825 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site JHS88_16825 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain JHS88_16830 IPR036641 HPT domain superfamily JHS88_16830 IPR019247 Histidine kinase BarA, N-terminal JHS88_16830 IPR005467 Histidine kinase domain JHS88_16830 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JHS88_16830 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain JHS88_16830 IPR001789 Signal transduction response regulator, receiver domain JHS88_16830 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JHS88_16830 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JHS88_16830 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_16830 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_16830 IPR003660 HAMP domain JHS88_16830 IPR011006 CheY-like superfamily JHS88_16835 IPR036291 NAD(P)-binding domain superfamily JHS88_16835 IPR000683 Oxidoreductase, N-terminal JHS88_16840 IPR002528 Multi antimicrobial extrusion protein JHS88_16845 IPR007458 Protein of unknown function DUF496 JHS88_16855 IPR036390 Winged helix DNA-binding domain superfamily JHS88_16855 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_16855 IPR007432 Protein of unknown function DUF480 JHS88_16860 IPR000305 GIY-YIG endonuclease JHS88_16860 IPR035901 GIY-YIG endonuclease superfamily JHS88_16865 IPR028082 Periplasmic binding protein-like I JHS88_16865 IPR025997 Periplasmic binding protein JHS88_16870 IPR001789 Signal transduction response regulator, receiver domain JHS88_16870 IPR005467 Histidine kinase domain JHS88_16870 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JHS88_16870 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_16870 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_16870 IPR011006 CheY-like superfamily JHS88_16870 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JHS88_16870 IPR015387 LuxQ, periplasmic JHS88_16870 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JHS88_16870 IPR035965 PAS domain superfamily JHS88_16870 IPR029151 Periplasmic sensor-like domain superfamily JHS88_16880 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain JHS88_16900 IPR019885 Transcription regulator HTH, AsnC-type, conserved site JHS88_16900 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_16900 IPR036390 Winged helix DNA-binding domain superfamily JHS88_16900 IPR019888 Transcription regulator AsnC-type JHS88_16900 IPR011008 Dimeric alpha-beta barrel JHS88_16900 IPR011991 ArsR-like helix-turn-helix domain JHS88_16900 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain JHS88_16900 IPR000485 AsnC-type HTH domain JHS88_16925 IPR001036 Acriflavin resistance protein JHS88_16925 IPR005791 Protein translocase subunit SecD JHS88_16925 IPR027398 SecD export protein N-terminal TM domain JHS88_16925 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial JHS88_16925 IPR022645 Protein-export membrane protein SecD/SecF, bacterial JHS88_16925 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site JHS88_16930 IPR022645 Protein-export membrane protein SecD/SecF, bacterial JHS88_16930 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site JHS88_16930 IPR005665 Protein-export membrane protein SecF, bacterial JHS88_16930 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial JHS88_16945 IPR011283 Acetoacetyl-CoA reductase JHS88_16945 IPR036291 NAD(P)-binding domain superfamily JHS88_16945 IPR002347 Short-chain dehydrogenase/reductase SDR JHS88_16945 IPR020904 Short-chain dehydrogenase/reductase, conserved site JHS88_16950 IPR020617 Thiolase, C-terminal JHS88_16950 IPR020610 Thiolase, active site JHS88_16950 IPR020616 Thiolase, N-terminal JHS88_16950 IPR020613 Thiolase, conserved site JHS88_16950 IPR002155 Thiolase JHS88_16950 IPR016039 Thiolase-like JHS88_16950 IPR020615 Thiolase, acyl-enzyme intermediate active site JHS88_16960 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I JHS88_16960 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain JHS88_16960 IPR029058 Alpha/Beta hydrolase fold JHS88_16960 IPR000073 Alpha/beta hydrolase fold-1 JHS88_16970 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT JHS88_16970 IPR005126 NapC/NirT cytochrome c, N-terminal JHS88_16970 IPR038266 NapC/NirT cytochrome c superfamily JHS88_16970 IPR024717 Denitrification system component NapC/NirT/NrfH JHS88_16970 IPR036280 Multiheme cytochrome superfamily JHS88_16970 IPR011031 Multihaem cytochrome JHS88_16975 IPR011031 Multihaem cytochrome JHS88_16975 IPR036280 Multiheme cytochrome superfamily JHS88_16975 IPR005591 Nitrate reductase cytochrome c-type subunit NapB JHS88_16980 IPR006311 Twin-arginine translocation pathway, signal sequence JHS88_16980 IPR010051 Periplasmic nitrate reductase, large subunit JHS88_16980 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain JHS88_16980 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site JHS88_16980 IPR006657 Molybdopterin dinucleotide-binding domain JHS88_16980 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain JHS88_16980 IPR009010 Aspartate decarboxylase-like domain superfamily JHS88_16980 IPR006656 Molybdopterin oxidoreductase JHS88_16990 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JHS88_16990 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JHS88_16990 IPR004496 Ferredoxin-type protein NapF JHS88_16995 IPR042295 NarX-like, N-terminal domain superfamily JHS88_16995 IPR003660 HAMP domain JHS88_16995 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_16995 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_16995 IPR005467 Histidine kinase domain JHS88_16995 IPR029095 NarX-like, N-terminal JHS88_16995 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing JHS88_16995 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain JHS88_17000 IPR001789 Signal transduction response regulator, receiver domain JHS88_17000 IPR016032 Signal transduction response regulator, C-terminal effector JHS88_17000 IPR011006 CheY-like superfamily JHS88_17000 IPR000792 Transcription regulator LuxR, C-terminal JHS88_17015 IPR011650 Peptidase M20, dimerisation domain JHS88_17015 IPR010161 Peptidase M20B, tripeptide aminopeptidase JHS88_17015 IPR002933 Peptidase M20 JHS88_17015 IPR036264 Bacterial exopeptidase dimerisation domain JHS88_17015 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site JHS88_17020 IPR016192 APOBEC/CMP deaminase, zinc-binding JHS88_17020 IPR016473 Deoxycytidylate deaminase JHS88_17020 IPR035105 Deoxycytidylate deaminase domain JHS88_17020 IPR002125 Cytidine and deoxycytidylate deaminase domain JHS88_17020 IPR015517 Deoxycytidylate deaminase-related JHS88_17020 IPR016193 Cytidine deaminase-like JHS88_17025 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain JHS88_17025 IPR006143 RND efflux pump, membrane fusion protein JHS88_17030 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JHS88_17030 IPR001036 Acriflavin resistance protein JHS88_17030 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 JHS88_17035 IPR000727 Target SNARE coiled-coil homology domain JHS88_17035 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JHS88_17035 IPR004090 Chemotaxis methyl-accepting receptor JHS88_17035 IPR003660 HAMP domain JHS88_17035 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain JHS88_17040 IPR000352 Peptide chain release factor class I JHS88_17045 IPR041492 Haloacid dehalogenase-like hydrolase JHS88_17045 IPR023214 HAD superfamily JHS88_17045 IPR023198 Phosphoglycolate phosphatase-like, domain 2 JHS88_17045 IPR010976 Beta-phosphoglucomutase hydrolase JHS88_17045 IPR036412 HAD-like superfamily JHS88_17045 IPR006439 HAD hydrolase, subfamily IA JHS88_17050 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel JHS88_17050 IPR000498 Outer membrane protein OmpA-like, transmembrane domain JHS88_17050 IPR036737 OmpA-like domain superfamily JHS88_17050 IPR002368 Outer membrane protein, OmpA JHS88_17050 IPR006665 OmpA-like domain JHS88_17050 IPR006664 Outer membrane protein, bacterial JHS88_17050 IPR006690 Outer membrane protein, OmpA-like, conserved site JHS88_17055 IPR013785 Aldolase-type TIM barrel JHS88_17055 IPR006218 DAHP synthetase I/KDSA JHS88_17055 IPR006219 DHAP synthase, class 1 JHS88_17060 IPR036259 MFS transporter superfamily JHS88_17060 IPR020846 Major facilitator superfamily domain JHS88_17060 IPR011701 Major facilitator superfamily JHS88_17065 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JHS88_17065 IPR004090 Chemotaxis methyl-accepting receptor JHS88_17065 IPR003660 HAMP domain JHS88_17065 IPR035965 PAS domain superfamily JHS88_17065 IPR000014 PAS domain JHS88_17065 IPR001610 PAC motif JHS88_17065 IPR013655 PAS fold-3 JHS88_17070 IPR029061 Thiamin diphosphate-binding fold JHS88_17070 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II JHS88_17070 IPR005475 Transketolase-like, pyrimidine-binding domain JHS88_17070 IPR020826 Transketolase binding site JHS88_17070 IPR033248 Transketolase, C-terminal domain JHS88_17070 IPR033247 Transketolase family JHS88_17070 IPR005474 Transketolase, N-terminal JHS88_17070 IPR005478 Transketolase, bacterial-like JHS88_17075 IPR013785 Aldolase-type TIM barrel JHS88_17075 IPR018225 Transaldolase, active site JHS88_17075 IPR001585 Transaldolase/Fructose-6-phosphate aldolase JHS88_17075 IPR004730 Transaldolase type 1 JHS88_17085 IPR022409 PKD/Chitinase domain JHS88_17085 IPR002126 Cadherin-like JHS88_17085 IPR013783 Immunoglobulin-like fold JHS88_17085 IPR017853 Glycoside hydrolase superfamily JHS88_17085 IPR014756 Immunoglobulin E-set JHS88_17085 IPR001223 Glycoside hydrolase family 18, catalytic domain JHS88_17085 IPR013540 Chitinase A N-terminal JHS88_17085 IPR029070 Chitinase insertion domain superfamily JHS88_17085 IPR011583 Chitinase II JHS88_17085 IPR036573 Carbohydrate-binding module superfamily 5/12 JHS88_17085 IPR001579 Glycoside hydrolase, chitinase active site JHS88_17085 IPR003610 Carbohydrate-binding module family 5/12 JHS88_17090 IPR005330 MHYT domain JHS88_17090 IPR000160 GGDEF domain JHS88_17090 IPR035919 EAL domain superfamily JHS88_17090 IPR001633 EAL domain JHS88_17090 IPR029787 Nucleotide cyclase JHS88_17095 IPR001763 Rhodanese-like domain JHS88_17095 IPR036873 Rhodanese-like domain superfamily JHS88_17095 IPR001307 Thiosulphate sulfurtransferase, conserved site JHS88_17110 IPR035985 Ubiquitin-activating enzyme JHS88_17110 IPR000594 THIF-type NAD/FAD binding fold JHS88_17110 IPR012730 Molybdopterin synthase sulfurylase MoeB JHS88_17115 IPR038987 Molybdopterin biosynthesis protein MoeA-like JHS88_17115 IPR005111 MoeA, C-terminal, domain IV JHS88_17115 IPR001453 MoaB/Mog domain JHS88_17115 IPR008284 Molybdenum cofactor biosynthesis, conserved site JHS88_17115 IPR036135 MoeA, N-terminal and linker domain superfamily JHS88_17115 IPR005110 MoeA, N-terminal and linker domain JHS88_17115 IPR036688 MoeA, C-terminal, domain IV superfamily JHS88_17115 IPR036425 MoaB/Mog-like domain superfamily JHS88_17120 IPR020602 GTP cyclohydrolase I domain JHS88_17120 IPR001474 GTP cyclohydrolase I JHS88_17120 IPR018234 GTP cyclohydrolase I, conserved site JHS88_17125 IPR001046 NRAMP family JHS88_17135 IPR023861 Chloride channel, ClcA JHS88_17135 IPR001807 Chloride channel, voltage gated JHS88_17135 IPR014743 Chloride channel, core JHS88_17150 IPR036812 NADP-dependent oxidoreductase domain superfamily JHS88_17150 IPR023210 NADP-dependent oxidoreductase domain JHS88_17150 IPR020471 Aldo/keto reductase JHS88_17155 IPR001789 Signal transduction response regulator, receiver domain JHS88_17155 IPR011006 CheY-like superfamily JHS88_17165 IPR036652 YjeF N-terminal domain superfamily JHS88_17165 IPR017953 Carbohydrate kinase, predicted, conserved site JHS88_17165 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase JHS88_17165 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr JHS88_17165 IPR004443 YjeF N-terminal domain JHS88_17165 IPR029056 Ribokinase-like JHS88_17170 IPR001093 IMP dehydrogenase/GMP reductase JHS88_17170 IPR015875 IMP dehydrogenase / GMP reductase, conserved site JHS88_17170 IPR005993 GMP reductase JHS88_17170 IPR013785 Aldolase-type TIM barrel JHS88_17175 IPR025110 AMP-binding enzyme, C-terminal domain JHS88_17175 IPR020845 AMP-binding, conserved site JHS88_17175 IPR000873 AMP-dependent synthetase/ligase JHS88_17175 IPR005914 Acetoacetyl-CoA synthase JHS88_17175 IPR042099 AMP-dependent synthetase-like superfamily JHS88_17180 IPR029035 DHS-like NAD/FAD-binding domain superfamily JHS88_17180 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JHS88_17180 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site JHS88_17180 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal JHS88_17180 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal JHS88_17180 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal JHS88_17180 IPR001308 Electron transfer flavoprotein alpha subunit/FixB JHS88_17185 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal JHS88_17185 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JHS88_17185 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal JHS88_17185 IPR012255 Electron transfer flavoprotein, beta subunit JHS88_17185 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site JHS88_17190 IPR040156 Electron transfer flavoprotein-ubiquinone oxidoreductase JHS88_17190 IPR036188 FAD/NAD(P)-binding domain superfamily JHS88_17190 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JHS88_17195 IPR003593 AAA+ ATPase domain JHS88_17195 IPR003439 ABC transporter-like JHS88_17195 IPR017871 ABC transporter, conserved site JHS88_17195 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal JHS88_17195 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_17220 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein JHS88_17220 IPR003593 AAA+ ATPase domain JHS88_17220 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_17220 IPR017871 ABC transporter, conserved site JHS88_17220 IPR003439 ABC transporter-like JHS88_17225 IPR011880 Phenylacetate-CoA ligase JHS88_17225 IPR042099 AMP-dependent synthetase-like superfamily JHS88_17225 IPR000873 AMP-dependent synthetase/ligase JHS88_17225 IPR028154 AMP-dependent ligase, C-terminal JHS88_17230 IPR025835 Thiopurine S-methyltransferase JHS88_17230 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_17230 IPR008854 TPMT family JHS88_17230 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification JHS88_17235 IPR005119 LysR, substrate-binding JHS88_17235 IPR000847 Transcription regulator HTH, LysR JHS88_17235 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_17235 IPR036390 Winged helix DNA-binding domain superfamily JHS88_17240 IPR022367 2-oxoacid:acceptor oxidoreductase, alpha subunit JHS88_17240 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II JHS88_17240 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain JHS88_17240 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain JHS88_17240 IPR029061 Thiamin diphosphate-binding fold JHS88_17240 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II JHS88_17240 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal JHS88_17245 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding JHS88_17245 IPR029061 Thiamin diphosphate-binding fold JHS88_17250 IPR009056 Cytochrome c-like domain JHS88_17250 IPR036909 Cytochrome c-like domain superfamily JHS88_17250 IPR002327 Cytochrome c, class IA/ IB JHS88_17260 IPR009061 Putative DNA-binding domain superfamily JHS88_17260 IPR000551 MerR-type HTH domain JHS88_17265 IPR029032 AhpD-like JHS88_17265 IPR003779 Carboxymuconolactone decarboxylase-like JHS88_17265 IPR012788 4-carboxymuconolactone decarboxylase JHS88_17270 IPR003719 Phenazine biosynthesis PhzF protein JHS88_17280 IPR003317 Cytochrome ubiquinol oxidase subunit 2 JHS88_17285 IPR002585 Cytochrome ubiquinol oxidase subunit 1 JHS88_17290 IPR036390 Winged helix DNA-binding domain superfamily JHS88_17290 IPR004839 Aminotransferase, class I/classII JHS88_17290 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_17290 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JHS88_17290 IPR000524 Transcription regulator HTH, GntR JHS88_17290 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JHS88_17290 IPR015424 Pyridoxal phosphate-dependent transferase JHS88_17295 IPR018357 Hexapeptide transferase, conserved site JHS88_17295 IPR024688 Maltose/galactoside acetyltransferase JHS88_17295 IPR001451 Hexapeptide repeat JHS88_17295 IPR011004 Trimeric LpxA-like superfamily JHS88_17300 IPR010920 LSM domain superfamily JHS88_17300 IPR011066 Mechanosensitive ion channel MscS, C-terminal JHS88_17300 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 JHS88_17300 IPR023408 Mechanosensitive ion channel MscS domain superfamily JHS88_17300 IPR025692 Mechanosensitive ion channel inner membrane domain 1 JHS88_17300 IPR024393 Mechanosensitive ion channel MscS, porin domain JHS88_17300 IPR006685 Mechanosensitive ion channel MscS JHS88_17300 IPR006686 Mechanosensitive ion channel MscS, conserved site JHS88_17315 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JHS88_17315 IPR001789 Signal transduction response regulator, receiver domain JHS88_17315 IPR019247 Histidine kinase BarA, N-terminal JHS88_17315 IPR036641 HPT domain superfamily JHS88_17315 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain JHS88_17315 IPR005467 Histidine kinase domain JHS88_17315 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JHS88_17315 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_17315 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JHS88_17315 IPR003660 HAMP domain JHS88_17315 IPR011006 CheY-like superfamily JHS88_17315 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_17320 IPR013785 Aldolase-type TIM barrel JHS88_17320 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site JHS88_17320 IPR000891 Pyruvate carboxyltransferase JHS88_17325 IPR011053 Single hybrid motif JHS88_17325 IPR011054 Rudiment single hybrid motif JHS88_17325 IPR041265 Propionyl-coenzyme A carboxylase, BT domain JHS88_17325 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain JHS88_17325 IPR000089 Biotin/lipoyl attachment JHS88_17325 IPR005482 Biotin carboxylase, C-terminal JHS88_17325 IPR011764 Biotin carboxylation domain JHS88_17325 IPR001882 Biotin-binding site JHS88_17325 IPR016185 Pre-ATP-grasp domain superfamily JHS88_17325 IPR013815 ATP-grasp fold, subdomain 1 JHS88_17325 IPR011761 ATP-grasp fold JHS88_17325 IPR005481 Biotin carboxylase-like, N-terminal domain JHS88_17330 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB JHS88_17330 IPR014748 Enoyl-CoA hydratase, C-terminal JHS88_17330 IPR029045 ClpP/crotonase-like domain superfamily JHS88_17330 IPR001753 Enoyl-CoA hydratase/isomerase JHS88_17335 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal JHS88_17335 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal JHS88_17335 IPR034733 Acetyl-CoA carboxylase JHS88_17335 IPR029045 ClpP/crotonase-like domain superfamily JHS88_17340 IPR006089 Acyl-CoA dehydrogenase, conserved site JHS88_17340 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain JHS88_17340 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal JHS88_17340 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal JHS88_17340 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal JHS88_17340 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily JHS88_17340 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily JHS88_17345 IPR011789 Cu(I)-responsive transcriptional regulator JHS88_17345 IPR015358 Transcription regulator MerR, DNA binding JHS88_17345 IPR000551 MerR-type HTH domain JHS88_17345 IPR009061 Putative DNA-binding domain superfamily JHS88_17350 IPR020615 Thiolase, acyl-enzyme intermediate active site JHS88_17350 IPR020610 Thiolase, active site JHS88_17350 IPR020617 Thiolase, C-terminal JHS88_17350 IPR020613 Thiolase, conserved site JHS88_17350 IPR020616 Thiolase, N-terminal JHS88_17350 IPR002155 Thiolase JHS88_17350 IPR016039 Thiolase-like JHS88_17355 IPR016162 Aldehyde dehydrogenase, N-terminal JHS88_17355 IPR016160 Aldehyde dehydrogenase, cysteine active site JHS88_17355 IPR015590 Aldehyde dehydrogenase domain JHS88_17355 IPR010061 Methylmalonate-semialdehyde dehydrogenase JHS88_17355 IPR016163 Aldehyde dehydrogenase, C-terminal JHS88_17355 IPR016161 Aldehyde/histidinol dehydrogenase JHS88_17360 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily JHS88_17360 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal JHS88_17360 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain JHS88_17360 IPR006089 Acyl-CoA dehydrogenase, conserved site JHS88_17360 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal JHS88_17360 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal JHS88_17360 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily JHS88_17365 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site JHS88_17365 IPR029045 ClpP/crotonase-like domain superfamily JHS88_17365 IPR001753 Enoyl-CoA hydratase/isomerase JHS88_17365 IPR014748 Enoyl-CoA hydratase, C-terminal JHS88_17375 IPR013328 6-phosphogluconate dehydrogenase, domain 2 JHS88_17375 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain JHS88_17375 IPR036291 NAD(P)-binding domain superfamily JHS88_17375 IPR015815 3-hydroxyisobutyrate dehydrogenase-related JHS88_17375 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site JHS88_17375 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily JHS88_17375 IPR011548 3-hydroxyisobutyrate dehydrogenase JHS88_17375 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding JHS88_17380 IPR020904 Short-chain dehydrogenase/reductase, conserved site JHS88_17380 IPR036291 NAD(P)-binding domain superfamily JHS88_17380 IPR002347 Short-chain dehydrogenase/reductase SDR JHS88_17380 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase JHS88_17385 IPR033416 Periplasmic sensor domain CHASE7 JHS88_17385 IPR029787 Nucleotide cyclase JHS88_17385 IPR000160 GGDEF domain JHS88_17390 IPR023772 DNA-binding HTH domain, TetR-type, conserved site JHS88_17390 IPR039538 BetI-type transcriptional repressor, C-terminal JHS88_17390 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JHS88_17390 IPR017757 Transcriptional repressor BetI JHS88_17390 IPR009057 Homeobox-like domain superfamily JHS88_17390 IPR001647 DNA-binding HTH domain, TetR-type JHS88_17395 IPR011264 Betaine aldehyde dehydrogenase JHS88_17395 IPR016163 Aldehyde dehydrogenase, C-terminal JHS88_17395 IPR016160 Aldehyde dehydrogenase, cysteine active site JHS88_17395 IPR029510 Aldehyde dehydrogenase, glutamic acid active site JHS88_17395 IPR016161 Aldehyde/histidinol dehydrogenase JHS88_17395 IPR016162 Aldehyde dehydrogenase, N-terminal JHS88_17395 IPR015590 Aldehyde dehydrogenase domain JHS88_17400 IPR027424 Glucose Oxidase, domain 2 JHS88_17400 IPR012132 Glucose-methanol-choline oxidoreductase JHS88_17400 IPR011533 Oxygen-dependent choline dehydrogenase JHS88_17400 IPR036188 FAD/NAD(P)-binding domain superfamily JHS88_17400 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal JHS88_17400 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal JHS88_17405 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain JHS88_17410 IPR035906 MetI-like superfamily JHS88_17410 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JHS88_17415 IPR003593 AAA+ ATPase domain JHS88_17415 IPR017871 ABC transporter, conserved site JHS88_17415 IPR005892 Glycine betaine transport ATP-binding subunit JHS88_17415 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_17415 IPR000644 CBS domain JHS88_17415 IPR003439 ABC transporter-like JHS88_17420 IPR029479 Nitroreductase JHS88_17420 IPR000415 Nitroreductase-like JHS88_17420 IPR033878 Nitroreductase NfsB-like JHS88_17430 IPR001107 Band 7 domain JHS88_17430 IPR001972 Stomatin family JHS88_17430 IPR018080 Band 7/stomatin-like, conserved site JHS88_17430 IPR032435 Band 7, C-terminal extension JHS88_17430 IPR036013 Band 7/SPFH domain superfamily JHS88_17440 IPR035919 EAL domain superfamily JHS88_17440 IPR001633 EAL domain JHS88_17440 IPR035965 PAS domain superfamily JHS88_17440 IPR000014 PAS domain JHS88_17440 IPR029787 Nucleotide cyclase JHS88_17440 IPR005330 MHYT domain JHS88_17440 IPR000160 GGDEF domain JHS88_17445 IPR004852 Di-haem cytochrome c peroxidase JHS88_17445 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase JHS88_17445 IPR036909 Cytochrome c-like domain superfamily JHS88_17445 IPR009056 Cytochrome c-like domain JHS88_17450 IPR005467 Histidine kinase domain JHS88_17450 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_17450 IPR011006 CheY-like superfamily JHS88_17450 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_17450 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JHS88_17450 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JHS88_17450 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JHS88_17450 IPR001789 Signal transduction response regulator, receiver domain JHS88_17450 IPR015387 LuxQ, periplasmic JHS88_17450 IPR035965 PAS domain superfamily JHS88_17450 IPR029151 Periplasmic sensor-like domain superfamily JHS88_17465 IPR006694 Fatty acid hydroxylase JHS88_17505 IPR000845 Nucleoside phosphorylase domain JHS88_17505 IPR035994 Nucleoside phosphorylase superfamily JHS88_17505 IPR010049 MTA/SAH nucleosidase JHS88_17510 IPR029787 Nucleotide cyclase JHS88_17510 IPR003660 HAMP domain JHS88_17510 IPR001633 EAL domain JHS88_17510 IPR035919 EAL domain superfamily JHS88_17510 IPR000160 GGDEF domain JHS88_17515 IPR023064 D-ribose pyranase JHS88_17515 IPR023750 RbsD-like superfamily JHS88_17515 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU JHS88_17520 IPR003593 AAA+ ATPase domain JHS88_17520 IPR003439 ABC transporter-like JHS88_17520 IPR017871 ABC transporter, conserved site JHS88_17520 IPR015861 ABC transporter, ribose import, RbsA JHS88_17520 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_17525 IPR001851 ABC transporter, permease JHS88_17530 IPR028082 Periplasmic binding protein-like I JHS88_17530 IPR025997 Periplasmic binding protein JHS88_17535 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site JHS88_17535 IPR011877 Ribokinase JHS88_17535 IPR011611 Carbohydrate kinase PfkB JHS88_17535 IPR002139 Ribokinase/fructokinase JHS88_17535 IPR029056 Ribokinase-like JHS88_17540 IPR028082 Periplasmic binding protein-like I JHS88_17540 IPR010982 Lambda repressor-like, DNA-binding domain superfamily JHS88_17540 IPR000843 LacI-type HTH domain JHS88_17550 IPR006419 Nicotinamide mononucleotide transporter PnuC JHS88_17555 IPR018016 Nucleoside phosphorylase, conserved site JHS88_17555 IPR000845 Nucleoside phosphorylase domain JHS88_17555 IPR035994 Nucleoside phosphorylase superfamily JHS88_17555 IPR010058 Uridine phosphorylase JHS88_17575 IPR039420 Transcriptional regulatory protein WalR-like JHS88_17575 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_17575 IPR001867 OmpR/PhoB-type DNA-binding domain JHS88_17575 IPR011006 CheY-like superfamily JHS88_17575 IPR001789 Signal transduction response regulator, receiver domain JHS88_17590 IPR017850 Alkaline-phosphatase-like, core domain superfamily JHS88_17590 IPR001952 Alkaline phosphatase JHS88_17590 IPR018299 Alkaline phosphatase, active site JHS88_17600 IPR015500 Peptidase S8, subtilisin-related JHS88_17600 IPR023828 Peptidase S8, subtilisin, Ser-active site JHS88_17600 IPR023827 Peptidase S8, subtilisin, Asp-active site JHS88_17600 IPR008979 Galactose-binding-like domain superfamily JHS88_17600 IPR002884 P domain JHS88_17600 IPR000209 Peptidase S8/S53 domain JHS88_17600 IPR036852 Peptidase S8/S53 domain superfamily JHS88_17610 IPR000160 GGDEF domain JHS88_17610 IPR011006 CheY-like superfamily JHS88_17610 IPR029787 Nucleotide cyclase JHS88_17610 IPR001789 Signal transduction response regulator, receiver domain JHS88_17615 IPR004694 Hydroxy amino acid transporter JHS88_17615 IPR018227 Amino acid/polyamine transporter 2 JHS88_17620 IPR023072 Acetyltransferase, YpeA JHS88_17620 IPR016181 Acyl-CoA N-acyltransferase JHS88_17620 IPR000182 GNAT domain JHS88_17625 IPR009010 Aspartate decarboxylase-like domain superfamily JHS88_17625 IPR006657 Molybdopterin dinucleotide-binding domain JHS88_17625 IPR006656 Molybdopterin oxidoreductase JHS88_17625 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site JHS88_17625 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain JHS88_17630 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site JHS88_17630 IPR019478 Sirohaem synthase, dimerisation domain JHS88_17630 IPR014776 Tetrapyrrole methylase, subdomain 2 JHS88_17630 IPR028281 Siroheme synthase, central domain JHS88_17630 IPR012409 Sirohaem synthase JHS88_17630 IPR037115 Sirohaem synthase, dimerisation domain superfamily JHS88_17630 IPR006367 Sirohaem synthase, N-terminal JHS88_17630 IPR014777 Tetrapyrrole methylase, subdomain 1 JHS88_17630 IPR006366 Uroporphyrin-III C-methyltransferase JHS88_17630 IPR000878 Tetrapyrrole methylase JHS88_17630 IPR035996 Tetrapyrrole methylase superfamily JHS88_17630 IPR036291 NAD(P)-binding domain superfamily JHS88_17635 IPR005940 Anthranilate phosphoribosyl transferase JHS88_17635 IPR000312 Glycosyl transferase, family 3 JHS88_17635 IPR017459 Glycosyl transferase family 3, N-terminal domain JHS88_17635 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily JHS88_17635 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily JHS88_17640 IPR002925 Dienelactone hydrolase JHS88_17640 IPR029058 Alpha/Beta hydrolase fold JHS88_17645 IPR013587 Nitrate/nitrite sensing protein JHS88_17645 IPR011006 CheY-like superfamily JHS88_17645 IPR010910 Nitrate/nitrite sensing protein, bacterial JHS88_17645 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_17645 IPR005561 ANTAR domain JHS88_17650 IPR029070 Chitinase insertion domain superfamily JHS88_17650 IPR006311 Twin-arginine translocation pathway, signal sequence JHS88_17655 IPR005889 Nitrate transport permease JHS88_17655 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JHS88_17655 IPR035906 MetI-like superfamily JHS88_17660 IPR003593 AAA+ ATPase domain JHS88_17660 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_17660 IPR005890 Nitrate transport ATP-binding subunit C/D JHS88_17660 IPR003439 ABC transporter-like JHS88_17660 IPR017871 ABC transporter, conserved site JHS88_17665 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type JHS88_17665 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site JHS88_17665 IPR007419 BFD-like [2Fe-2S]-binding domain JHS88_17665 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily JHS88_17665 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB JHS88_17665 IPR036188 FAD/NAD(P)-binding domain superfamily JHS88_17665 IPR023753 FAD/NAD(P)-binding domain JHS88_17665 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily JHS88_17665 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily JHS88_17665 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain JHS88_17665 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain JHS88_17665 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal JHS88_17680 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JHS88_17680 IPR009057 Homeobox-like domain superfamily JHS88_17680 IPR001647 DNA-binding HTH domain, TetR-type JHS88_17680 IPR023772 DNA-binding HTH domain, TetR-type, conserved site JHS88_17680 IPR013572 Transcription regulator MAATS, C-terminal JHS88_17695 IPR001789 Signal transduction response regulator, receiver domain JHS88_17695 IPR029787 Nucleotide cyclase JHS88_17695 IPR011006 CheY-like superfamily JHS88_17695 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase JHS88_17720 IPR000719 Protein kinase domain JHS88_17720 IPR011009 Protein kinase-like domain superfamily JHS88_17720 IPR017441 Protein kinase, ATP binding site JHS88_17720 IPR008271 Serine/threonine-protein kinase, active site JHS88_17720 IPR005543 PASTA domain JHS88_17735 IPR010263 Type VI secretion protein, VC_A0114 JHS88_17740 IPR025713 Motility protein B, N-terminal domain JHS88_17740 IPR006665 OmpA-like domain JHS88_17740 IPR036737 OmpA-like domain superfamily JHS88_17745 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_17745 IPR010623 Type VI secretion system IcmF, C-terminal JHS88_17745 IPR009612 IcmF-related JHS88_17745 IPR017731 Type VI secretion system, IcmF JHS88_17745 IPR025743 IcmF-related, N-terminal domain JHS88_17755 IPR001932 PPM-type phosphatase domain JHS88_17755 IPR036457 PPM-type phosphatase domain superfamily JHS88_17755 IPR015655 Protein phosphatase 2C family JHS88_17765 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 JHS88_17770 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath JHS88_17775 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath JHS88_17790 IPR010272 Type VI secretion system, TssF-like JHS88_17800 IPR036628 Clp, N-terminal domain superfamily JHS88_17800 IPR003593 AAA+ ATPase domain JHS88_17800 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_17800 IPR041546 ClpA/ClpB, AAA lid domain JHS88_17800 IPR018368 ClpA/B, conserved site 1 JHS88_17800 IPR001270 ClpA/B family JHS88_17800 IPR004176 Clp, N-terminal JHS88_17800 IPR019489 Clp ATPase, C-terminal JHS88_17800 IPR017729 Type VI secretion system, ATPase ClpV1 JHS88_17800 IPR003959 ATPase, AAA-type, core JHS88_17810 IPR006531 Gp5 N-terminal JHS88_17810 IPR010609 Gp5, C-terminal JHS88_17810 IPR037026 Vgr protein, OB-fold domain superfamily JHS88_17810 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein JHS88_17810 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset JHS88_17825 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type JHS88_17825 IPR029052 Metallo-dependent phosphatase-like JHS88_17825 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain JHS88_17825 IPR026843 Nuclease SbcCD subunit D, C-terminal domain JHS88_17825 IPR004593 Nuclease SbcCD subunit D JHS88_17830 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_17830 IPR038729 Rad50/SbcC-type AAA domain JHS88_17850 IPR012674 Calycin JHS88_17850 IPR022271 Lipocalin, ApoD type JHS88_17850 IPR002446 Lipocalin, bacterial JHS88_17850 IPR022272 Lipocalin family conserved site JHS88_17850 IPR000566 Lipocalin/cytosolic fatty-acid binding domain JHS88_17860 IPR036259 MFS transporter superfamily JHS88_17860 IPR005829 Sugar transporter, conserved site JHS88_17860 IPR004812 Drug resistance transporter Bcr/CmlA subfamily JHS88_17860 IPR011701 Major facilitator superfamily JHS88_17860 IPR020846 Major facilitator superfamily domain JHS88_17870 IPR018385 C4-dicarboxylate anaerobic carrier-like JHS88_17875 IPR009056 Cytochrome c-like domain JHS88_17875 IPR036909 Cytochrome c-like domain superfamily JHS88_17875 IPR024167 Cytochrome c4-like JHS88_17880 IPR023603 Threonine aldolase JHS88_17880 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JHS88_17880 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JHS88_17880 IPR015424 Pyridoxal phosphate-dependent transferase JHS88_17880 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase JHS88_17890 IPR023671 ATPase RavA JHS88_17890 IPR022547 ATPase, RavA, C-terminal JHS88_17890 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_17890 IPR041538 ATPase RavA-like, AAA lid domain JHS88_17890 IPR003593 AAA+ ATPase domain JHS88_17890 IPR011704 ATPase, dynein-related, AAA domain JHS88_17895 IPR002035 von Willebrand factor, type A JHS88_17895 IPR036465 von Willebrand factor A-like domain superfamily JHS88_17895 IPR008912 Uncharacterised protein family CoxE-like JHS88_17895 IPR023481 Uncharacterised protein family ViaA JHS88_17910 IPR036390 Winged helix DNA-binding domain superfamily JHS88_17910 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_17910 IPR000847 Transcription regulator HTH, LysR JHS88_17910 IPR005119 LysR, substrate-binding JHS88_17915 IPR036318 FAD-binding, type PCMH-like superfamily JHS88_17915 IPR016164 FAD-linked oxidase-like, C-terminal JHS88_17915 IPR016166 FAD-binding domain, PCMH-type JHS88_17915 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal JHS88_17915 IPR016167 FAD-binding, type PCMH, subdomain 1 JHS88_17915 IPR006094 FAD linked oxidase, N-terminal JHS88_17915 IPR016169 FAD-binding, type PCMH, subdomain 2 JHS88_17915 IPR012256 D-lactate dehydrogenase JHS88_17915 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 JHS88_17915 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 JHS88_17935 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site JHS88_17935 IPR029066 PLP-binding barrel JHS88_17935 IPR000821 Alanine racemase JHS88_17935 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal JHS88_17935 IPR011079 Alanine racemase, C-terminal JHS88_17935 IPR001608 Alanine racemase, N-terminal JHS88_17955 IPR013776 Alpha-amylase, thermostable JHS88_17955 IPR017853 Glycoside hydrolase superfamily JHS88_17955 IPR013780 Glycosyl hydrolase, all-beta JHS88_17955 IPR006047 Glycosyl hydrolase, family 13, catalytic domain JHS88_17955 IPR015237 Alpha-amylase C-terminal, prokaryotic JHS88_17975 IPR012336 Thioredoxin-like fold JHS88_17975 IPR013766 Thioredoxin domain JHS88_17975 IPR036249 Thioredoxin-like superfamily JHS88_17975 IPR004670 Na+/H+ antiporter NhaA JHS88_17975 IPR023171 Na/H antiporter domain superfamily JHS88_18010 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal JHS88_18010 IPR023459 Transcription elongation factor GreA/GreB family JHS88_18010 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily JHS88_18010 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain JHS88_18010 IPR028625 Regulator of nucleoside diphosphate kinase JHS88_18015 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB JHS88_18015 IPR007419 BFD-like [2Fe-2S]-binding domain JHS88_18015 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily JHS88_18015 IPR036188 FAD/NAD(P)-binding domain superfamily JHS88_18015 IPR023753 FAD/NAD(P)-binding domain JHS88_18015 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain JHS88_18015 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily JHS88_18015 IPR017121 Nitrite reductase [NAD(P)H], large subunit JHS88_18015 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain JHS88_18015 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site JHS88_18015 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal JHS88_18020 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type JHS88_18020 IPR017881 Nitrite reductase (NADH) small subunit JHS88_18020 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily JHS88_18025 IPR023999 Formate transporter FocA, putative JHS88_18025 IPR024002 Formate/nitrite transporter, conserved site JHS88_18025 IPR000292 Formate/nitrite transporter JHS88_18025 IPR023271 Aquaporin-like JHS88_18030 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site JHS88_18030 IPR006366 Uroporphyrin-III C-methyltransferase JHS88_18030 IPR000878 Tetrapyrrole methylase JHS88_18030 IPR006367 Sirohaem synthase, N-terminal JHS88_18030 IPR019478 Sirohaem synthase, dimerisation domain JHS88_18030 IPR028281 Siroheme synthase, central domain JHS88_18030 IPR012409 Sirohaem synthase JHS88_18030 IPR035996 Tetrapyrrole methylase superfamily JHS88_18030 IPR014777 Tetrapyrrole methylase, subdomain 1 JHS88_18030 IPR037115 Sirohaem synthase, dimerisation domain superfamily JHS88_18030 IPR036291 NAD(P)-binding domain superfamily JHS88_18030 IPR014776 Tetrapyrrole methylase, subdomain 2 JHS88_18045 IPR004668 Anaerobic c4-dicarboxylate membrane transporter JHS88_18055 IPR010917 TonB-dependent receptor, conserved site JHS88_18055 IPR010105 TonB-dependent siderophore receptor JHS88_18055 IPR010916 TonB box, conserved site JHS88_18055 IPR039426 Vitamin B12 transporter BtuB-like JHS88_18055 IPR037066 TonB-dependent receptor, plug domain superfamily JHS88_18055 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily JHS88_18055 IPR012910 TonB-dependent receptor, plug domain JHS88_18055 IPR000531 TonB-dependent receptor-like, beta-barrel JHS88_18070 IPR020483 Uncharacterised protein family YgbA JHS88_18075 IPR002528 Multi antimicrobial extrusion protein JHS88_18080 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_18080 IPR011123 Two component regulator three Y JHS88_18080 IPR015943 WD40/YVTN repeat-like-containing domain superfamily JHS88_18080 IPR011006 CheY-like superfamily JHS88_18080 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JHS88_18080 IPR011110 Two component regulator propeller JHS88_18080 IPR001789 Signal transduction response regulator, receiver domain JHS88_18080 IPR018062 HTH domain AraC-type, conserved site JHS88_18080 IPR018060 DNA binding HTH domain, AraC-type JHS88_18080 IPR009057 Homeobox-like domain superfamily JHS88_18080 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JHS88_18080 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JHS88_18080 IPR005467 Histidine kinase domain JHS88_18080 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_18080 IPR013783 Immunoglobulin-like fold JHS88_18080 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily JHS88_18085 IPR011701 Major facilitator superfamily JHS88_18085 IPR020846 Major facilitator superfamily domain JHS88_18085 IPR036259 MFS transporter superfamily JHS88_18085 IPR023745 MSF-type transporter, YcaD JHS88_18090 IPR005746 Thioredoxin JHS88_18090 IPR036249 Thioredoxin-like superfamily JHS88_18090 IPR013766 Thioredoxin domain JHS88_18090 IPR017937 Thioredoxin, conserved site JHS88_18095 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JHS88_18095 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal JHS88_18095 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 JHS88_18095 IPR016039 Thiolase-like JHS88_18115 IPR001250 Mannose-6-phosphate isomerase, type I JHS88_18115 IPR016305 Mannose-6-phosphate isomerase JHS88_18115 IPR014710 RmlC-like jelly roll fold JHS88_18115 IPR018050 Phosphomannose isomerase, type I, conserved site JHS88_18115 IPR011051 RmlC-like cupin domain superfamily JHS88_18120 IPR011701 Major facilitator superfamily JHS88_18120 IPR036259 MFS transporter superfamily JHS88_18120 IPR021159 Glycerate/sugar phosphate transporter, conserved site JHS88_18120 IPR000849 Sugar phosphate transporter JHS88_18120 IPR020846 Major facilitator superfamily domain JHS88_18125 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain JHS88_18125 IPR005467 Histidine kinase domain JHS88_18125 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_18125 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_18125 IPR007895 MASE1 JHS88_18130 IPR011006 CheY-like superfamily JHS88_18130 IPR016032 Signal transduction response regulator, C-terminal effector JHS88_18130 IPR001789 Signal transduction response regulator, receiver domain JHS88_18130 IPR000792 Transcription regulator LuxR, C-terminal JHS88_18135 IPR011701 Major facilitator superfamily JHS88_18135 IPR020846 Major facilitator superfamily domain JHS88_18135 IPR036259 MFS transporter superfamily JHS88_18135 IPR021159 Glycerate/sugar phosphate transporter, conserved site JHS88_18135 IPR000849 Sugar phosphate transporter JHS88_18140 IPR016193 Cytidine deaminase-like JHS88_18140 IPR003786 Sulfur carrier protein FdhD JHS88_18145 IPR000847 Transcription regulator HTH, LysR JHS88_18145 IPR005119 LysR, substrate-binding JHS88_18145 IPR036390 Winged helix DNA-binding domain superfamily JHS88_18145 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_18150 IPR041953 YdeP, molybdopterin-binding oxidoreductase-like domain JHS88_18150 IPR010046 Oxidoreductase alpha (molybdopterin) subunit JHS88_18150 IPR037951 YdeP-like, MopB domain JHS88_18150 IPR006656 Molybdopterin oxidoreductase JHS88_18150 IPR009010 Aspartate decarboxylase-like domain superfamily JHS88_18155 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JHS88_18155 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily JHS88_18155 IPR036188 FAD/NAD(P)-binding domain superfamily JHS88_18155 IPR023753 FAD/NAD(P)-binding domain JHS88_18155 IPR017758 Coenzyme A disulphide reductase JHS88_18155 IPR023536 Coenzyme A disulphide reductase, staphyolococci JHS88_18170 IPR007272 Sulphur transport domain JHS88_18180 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JHS88_18180 IPR001036 Acriflavin resistance protein JHS88_18180 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 JHS88_18185 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain JHS88_18185 IPR006143 RND efflux pump, membrane fusion protein JHS88_18195 IPR005144 ATP-cone domain JHS88_18195 IPR019777 Formate C-acetyltransferase glycine radical, conserved site JHS88_18195 IPR001150 Glycine radical domain JHS88_18195 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic JHS88_18200 IPR001989 Radical-activating enzyme, conserved site JHS88_18200 IPR013785 Aldolase-type TIM barrel JHS88_18200 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic JHS88_18200 IPR034457 Organic radical-activating enzymes JHS88_18200 IPR007197 Radical SAM JHS88_18205 IPR002528 Multi antimicrobial extrusion protein JHS88_18210 IPR020449 Transcription regulator HTH, AraC- type JHS88_18210 IPR018062 HTH domain AraC-type, conserved site JHS88_18210 IPR018060 DNA binding HTH domain, AraC-type JHS88_18210 IPR009057 Homeobox-like domain superfamily JHS88_18210 IPR029062 Class I glutamine amidotransferase-like JHS88_18215 IPR000796 Aspartate/other aminotransferase JHS88_18215 IPR015424 Pyridoxal phosphate-dependent transferase JHS88_18215 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JHS88_18215 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JHS88_18215 IPR004839 Aminotransferase, class I/classII JHS88_18220 IPR021109 Aspartic peptidase domain superfamily JHS88_18220 IPR013815 ATP-grasp fold, subdomain 1 JHS88_18220 IPR013651 ATP-grasp fold, RimK-type JHS88_18220 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX JHS88_18220 IPR041107 RimK, PreATP-grasp domain JHS88_18220 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK JHS88_18220 IPR011761 ATP-grasp fold JHS88_18230 IPR016052 Bacteriophage 933W, L0136 JHS88_18230 IPR005220 Bacterial OB-fold JHS88_18230 IPR036700 Bacterial OB-fold superfamily JHS88_18235 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_18235 IPR011698 CobB/CobQ-like glutamine amidotransferase JHS88_18235 IPR004459 Cobyric acid synthase CobQ JHS88_18235 IPR029062 Class I glutamine amidotransferase-like JHS88_18235 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 JHS88_18235 IPR017929 CobB/CobQ glutamine amidotransferase JHS88_18240 IPR005950 Molybdate ABC transporter, substrate-binding protein JHS88_18245 IPR011867 Molybdate ABC transporter, permease protein JHS88_18245 IPR035906 MetI-like superfamily JHS88_18245 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JHS88_18250 IPR003439 ABC transporter-like JHS88_18250 IPR008995 Molybdate/tungstate binding, C-terminal JHS88_18250 IPR015852 ABC transporter, molybdenum import, ModC JHS88_18250 IPR017871 ABC transporter, conserved site JHS88_18250 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_18250 IPR003593 AAA+ ATPase domain JHS88_18250 IPR004606 Molybdenum-pterin binding JHS88_18250 IPR005116 Transport-associated OB, type 1 JHS88_18250 IPR011868 Molybdate ABC transporter, ATP-binding protein JHS88_18260 IPR001294 Phytochrome JHS88_18260 IPR016132 Phytochrome chromophore attachment domain JHS88_18260 IPR029787 Nucleotide cyclase JHS88_18260 IPR000160 GGDEF domain JHS88_18260 IPR029016 GAF-like domain superfamily JHS88_18260 IPR003018 GAF domain JHS88_18260 IPR035919 EAL domain superfamily JHS88_18260 IPR001633 EAL domain JHS88_18260 IPR013515 Phytochrome, central region JHS88_18270 IPR029787 Nucleotide cyclase JHS88_18270 IPR000160 GGDEF domain JHS88_18285 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 JHS88_18285 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 JHS88_18285 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal JHS88_18285 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain JHS88_18285 IPR036291 NAD(P)-binding domain superfamily JHS88_18285 IPR026255 NAD(P) transhydrogenase, alpha subunit JHS88_18285 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal JHS88_18290 IPR029035 DHS-like NAD/FAD-binding domain superfamily JHS88_18290 IPR012136 NADP transhydrogenase, beta subunit JHS88_18290 IPR034300 NADP transhydrogenase beta-like domain JHS88_18300 IPR001789 Signal transduction response regulator, receiver domain JHS88_18300 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_18300 IPR039420 Transcriptional regulatory protein WalR-like JHS88_18300 IPR001867 OmpR/PhoB-type DNA-binding domain JHS88_18300 IPR011006 CheY-like superfamily JHS88_18315 IPR005371 Uncharacterised protein family UPF0181 JHS88_18320 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JHS88_18320 IPR006015 Universal stress protein A family JHS88_18320 IPR006016 UspA JHS88_18330 IPR005119 LysR, substrate-binding JHS88_18330 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_18330 IPR000847 Transcription regulator HTH, LysR JHS88_18330 IPR036390 Winged helix DNA-binding domain superfamily JHS88_18410 IPR001950 SUI1 domain JHS88_18410 IPR005872 Archaeal/bacterial translation initiation factor SUI1 JHS88_18410 IPR036877 SUI1 domain superfamily JHS88_18420 IPR016185 Pre-ATP-grasp domain superfamily JHS88_18420 IPR011095 D-alanine--D-alanine ligase, C-terminal JHS88_18420 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site JHS88_18420 IPR013815 ATP-grasp fold, subdomain 1 JHS88_18420 IPR011761 ATP-grasp fold JHS88_18420 IPR011127 D-alanine--D-alanine ligase, N-terminal domain JHS88_18420 IPR005905 D-alanine--D-alanine ligase JHS88_18430 IPR016181 Acyl-CoA N-acyltransferase JHS88_18430 IPR011761 ATP-grasp fold JHS88_18430 IPR013815 ATP-grasp fold, subdomain 1 JHS88_18430 IPR003781 CoA-binding JHS88_18430 IPR000182 GNAT domain JHS88_18430 IPR036291 NAD(P)-binding domain superfamily JHS88_18430 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain JHS88_18430 IPR016102 Succinyl-CoA synthetase-like JHS88_18435 IPR036390 Winged helix DNA-binding domain superfamily JHS88_18435 IPR005119 LysR, substrate-binding JHS88_18435 IPR000847 Transcription regulator HTH, LysR JHS88_18435 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_18440 IPR012910 TonB-dependent receptor, plug domain JHS88_18440 IPR037066 TonB-dependent receptor, plug domain superfamily JHS88_18440 IPR000531 TonB-dependent receptor-like, beta-barrel JHS88_18440 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor JHS88_18440 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily JHS88_18440 IPR039426 Vitamin B12 transporter BtuB-like JHS88_18445 IPR016040 NAD(P)-binding domain JHS88_18445 IPR036291 NAD(P)-binding domain superfamily JHS88_18445 IPR005886 UDP-glucose 4-epimerase JHS88_18450 IPR013655 PAS fold-3 JHS88_18450 IPR013656 PAS fold-4 JHS88_18450 IPR035965 PAS domain superfamily JHS88_18450 IPR000014 PAS domain JHS88_18450 IPR001610 PAC motif JHS88_18450 IPR029787 Nucleotide cyclase JHS88_18450 IPR007895 MASE1 JHS88_18450 IPR000160 GGDEF domain JHS88_18450 IPR035919 EAL domain superfamily JHS88_18450 IPR001633 EAL domain JHS88_18450 IPR000700 PAS-associated, C-terminal JHS88_18455 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel JHS88_18455 IPR005501 LamB/YcsF/PxpA-like JHS88_18460 IPR003833 Carboxyltransferase domain, subdomain C and D JHS88_18460 IPR029000 Cyclophilin-like domain superfamily JHS88_18460 IPR010016 KipI family JHS88_18465 IPR029000 Cyclophilin-like domain superfamily JHS88_18465 IPR003778 Carboxyltransferase domain, subdomain A and B JHS88_18475 IPR038766 Membrane component of ABC transporter, predicted JHS88_18480 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_18480 IPR017871 ABC transporter, conserved site JHS88_18480 IPR003439 ABC transporter-like JHS88_18480 IPR003593 AAA+ ATPase domain JHS88_18485 IPR008265 Lipase, GDSL, active site JHS88_18485 IPR036514 SGNH hydrolase superfamily JHS88_18485 IPR013830 SGNH hydrolase-type esterase domain JHS88_18490 IPR010758 Trans-2-enoyl-CoA reductase JHS88_18490 IPR036291 NAD(P)-binding domain superfamily JHS88_18490 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative JHS88_18490 IPR024906 Enoyl reductase FAD binding domain JHS88_18495 IPR005330 MHYT domain JHS88_18495 IPR000160 GGDEF domain JHS88_18495 IPR000014 PAS domain JHS88_18495 IPR035965 PAS domain superfamily JHS88_18495 IPR035919 EAL domain superfamily JHS88_18495 IPR001633 EAL domain JHS88_18495 IPR029787 Nucleotide cyclase JHS88_18505 IPR036869 Chaperone J-domain superfamily JHS88_18505 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily JHS88_18505 IPR001305 Heat shock protein DnaJ, cysteine-rich domain JHS88_18505 IPR008971 HSP40/DnaJ peptide-binding JHS88_18505 IPR018253 DnaJ domain, conserved site JHS88_18505 IPR001623 DnaJ domain JHS88_18505 IPR012724 Chaperone DnaJ JHS88_18505 IPR002939 Chaperone DnaJ, C-terminal JHS88_18530 IPR023767 Transcriptional regulator SgrR JHS88_18530 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain JHS88_18530 IPR000914 Solute-binding protein family 5 domain JHS88_18530 IPR039424 Solute-binding protein family 5 JHS88_18540 IPR003736 Phenylacetic acid degradation-related domain JHS88_18540 IPR029069 HotDog domain superfamily JHS88_18540 IPR006683 Thioesterase domain JHS88_18555 IPR042117 OMPP1/FadL/TodX superfamily JHS88_18555 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) JHS88_18560 IPR025920 Bacterial virulence factor lipase, N-terminal domain JHS88_18560 IPR020009 Extracellular lipase, Pla-1/cef family JHS88_18560 IPR029058 Alpha/Beta hydrolase fold JHS88_18575 IPR005496 Integral membrane protein TerC JHS88_18575 IPR022369 Integral membrane protein TerC, riboswitch-linked JHS88_18580 IPR029052 Metallo-dependent phosphatase-like JHS88_18580 IPR008334 5'-Nucleotidase, C-terminal JHS88_18580 IPR036907 5'-Nucleotidase, C-terminal domain superfamily JHS88_18580 IPR006146 5'-Nucleotidase, conserved site JHS88_18580 IPR006179 5'-Nucleotidase/apyrase JHS88_18580 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type JHS88_18580 IPR006420 NAD pyrophosphatase/5-nucleotidase NadN JHS88_18585 IPR022602 Protein of unknown function DUF2813 JHS88_18585 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_18585 IPR006171 TOPRIM domain JHS88_18585 IPR034139 OLD protein-like, TOPRIM domain JHS88_18590 IPR009476 Protein of unknown function DUF1097 JHS88_18595 IPR005119 LysR, substrate-binding JHS88_18595 IPR000847 Transcription regulator HTH, LysR JHS88_18595 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_18595 IPR036390 Winged helix DNA-binding domain superfamily JHS88_18600 IPR023999 Formate transporter FocA, putative JHS88_18600 IPR024002 Formate/nitrite transporter, conserved site JHS88_18600 IPR000292 Formate/nitrite transporter JHS88_18600 IPR023271 Aquaporin-like JHS88_18605 IPR023480 Uncharacterised protein family UPF0312/YceI JHS88_18605 IPR007372 Lipid/polyisoprenoid-binding, YceI-like JHS88_18605 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily JHS88_18610 IPR016174 Di-haem cytochrome, transmembrane JHS88_18610 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase JHS88_18625 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain JHS88_18625 IPR035919 EAL domain superfamily JHS88_18625 IPR001633 EAL domain JHS88_18630 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site JHS88_18630 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_18630 IPR001650 Helicase, C-terminal JHS88_18630 IPR014014 RNA helicase, DEAD-box type, Q motif JHS88_18630 IPR028622 ATP-dependent RNA helicase RhlE JHS88_18630 IPR011545 DEAD/DEAH box helicase domain JHS88_18630 IPR014001 Helicase superfamily 1/2, ATP-binding domain JHS88_18635 IPR007431 Acyl carrier protein phosphodiesterase JHS88_18635 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria JHS88_18640 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JHS88_18640 IPR029151 Periplasmic sensor-like domain superfamily JHS88_18645 IPR037512 Phosphoglycolate phosphatase, prokaryotic JHS88_18645 IPR023198 Phosphoglycolate phosphatase-like, domain 2 JHS88_18645 IPR023214 HAD superfamily JHS88_18645 IPR041492 Haloacid dehalogenase-like hydrolase JHS88_18645 IPR036412 HAD-like superfamily JHS88_18645 IPR006439 HAD hydrolase, subfamily IA JHS88_18650 IPR037522 HD-GYP domain JHS88_18650 IPR011006 CheY-like superfamily JHS88_18650 IPR021800 Domain of unknown function DUF3369 JHS88_18650 IPR003607 HD/PDEase domain JHS88_18650 IPR001789 Signal transduction response regulator, receiver domain JHS88_18665 IPR029056 Ribokinase-like JHS88_18665 IPR011611 Carbohydrate kinase PfkB JHS88_18665 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site JHS88_18670 IPR000559 Formate-tetrahydrofolate ligase, FTHFS JHS88_18670 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site JHS88_18670 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_18675 IPR011831 Glucose-1-phosphate adenylyltransferase JHS88_18675 IPR005836 ADP-glucose pyrophosphorylase, conserved site JHS88_18675 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial JHS88_18675 IPR005835 Nucleotidyl transferase domain JHS88_18675 IPR029044 Nucleotide-diphospho-sugar transferases JHS88_18675 IPR011004 Trimeric LpxA-like superfamily JHS88_18680 IPR009470 Chitinase, C-terminal JHS88_18680 IPR013783 Immunoglobulin-like fold JHS88_18680 IPR017853 Glycoside hydrolase superfamily JHS88_18680 IPR001223 Glycoside hydrolase family 18, catalytic domain JHS88_18680 IPR036573 Carbohydrate-binding module superfamily 5/12 JHS88_18680 IPR029070 Chitinase insertion domain superfamily JHS88_18680 IPR011583 Chitinase II JHS88_18680 IPR003610 Carbohydrate-binding module family 5/12 JHS88_18685 IPR009057 Homeobox-like domain superfamily JHS88_18685 IPR018060 DNA binding HTH domain, AraC-type JHS88_18685 IPR009594 Transcription regulator HTH, AraC, N-terminal JHS88_18690 IPR018211 Alcohol dehydrogenase, iron-type, conserved site JHS88_18690 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA JHS88_18700 IPR001789 Signal transduction response regulator, receiver domain JHS88_18700 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_18700 IPR025944 Sigma-54 interaction domain, conserved site JHS88_18700 IPR002197 DNA binding HTH domain, Fis-type JHS88_18700 IPR009057 Homeobox-like domain superfamily JHS88_18700 IPR011006 CheY-like superfamily JHS88_18700 IPR002078 RNA polymerase sigma factor 54 interaction domain JHS88_18705 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_18705 IPR003660 HAMP domain JHS88_18705 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_18705 IPR005467 Histidine kinase domain JHS88_18705 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JHS88_18705 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JHS88_18705 IPR017116 Signal transduction histidine kinase, PgtB JHS88_18715 IPR021159 Glycerate/sugar phosphate transporter, conserved site JHS88_18715 IPR000849 Sugar phosphate transporter JHS88_18715 IPR036259 MFS transporter superfamily JHS88_18715 IPR011701 Major facilitator superfamily JHS88_18715 IPR020846 Major facilitator superfamily domain JHS88_18720 IPR015806 Pyruvate kinase, insert domain superfamily JHS88_18720 IPR036918 Pyruvate kinase, C-terminal domain superfamily JHS88_18720 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily JHS88_18720 IPR040442 Pyruvate kinase-like domain superfamily JHS88_18720 IPR011037 Pyruvate kinase-like, insert domain superfamily JHS88_18720 IPR018209 Pyruvate kinase, active site JHS88_18720 IPR015793 Pyruvate kinase, barrel JHS88_18720 IPR015795 Pyruvate kinase, C-terminal JHS88_18720 IPR001697 Pyruvate kinase JHS88_18725 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type JHS88_18725 IPR017871 ABC transporter, conserved site JHS88_18725 IPR003439 ABC transporter-like JHS88_18725 IPR003593 AAA+ ATPase domain JHS88_18725 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_18730 IPR035906 MetI-like superfamily JHS88_18730 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JHS88_18730 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain JHS88_18735 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter JHS88_18735 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JHS88_18735 IPR018313 Solute-binding protein family 3, conserved site JHS88_18735 IPR001320 Ionotropic glutamate receptor JHS88_18740 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JHS88_18740 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain JHS88_18740 IPR035906 MetI-like superfamily JHS88_18745 IPR001610 PAC motif JHS88_18745 IPR035965 PAS domain superfamily JHS88_18745 IPR001633 EAL domain JHS88_18745 IPR035919 EAL domain superfamily JHS88_18745 IPR003018 GAF domain JHS88_18745 IPR029016 GAF-like domain superfamily JHS88_18745 IPR000160 GGDEF domain JHS88_18745 IPR029787 Nucleotide cyclase JHS88_18745 IPR000014 PAS domain JHS88_18745 IPR013767 PAS fold JHS88_18745 IPR000700 PAS-associated, C-terminal JHS88_18760 IPR028082 Periplasmic binding protein-like I JHS88_18760 IPR012781 D-fructose-responsive transcription factor JHS88_18760 IPR000843 LacI-type HTH domain JHS88_18760 IPR001761 Periplasmic binding protein/LacI sugar binding domain JHS88_18760 IPR010982 Lambda repressor-like, DNA-binding domain superfamily JHS88_18765 IPR002114 Phosphotransferase system, HPr serine phosphorylation site JHS88_18765 IPR002178 PTS EIIA type-2 domain JHS88_18765 IPR016152 Phosphotransferase/anion transporter JHS88_18765 IPR035895 HPr-like superfamily JHS88_18765 IPR000032 Phosphocarrier protein HPr-like JHS88_18765 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site JHS88_18770 IPR022463 Fructose 1-phosphate kinase JHS88_18770 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site JHS88_18770 IPR011611 Carbohydrate kinase PfkB JHS88_18770 IPR029056 Ribokinase-like JHS88_18770 IPR017583 Tagatose/fructose phosphokinase JHS88_18775 IPR006327 Phosphotransferase system, fructose IIC component JHS88_18775 IPR003353 Phosphotransferase system, fructose-specific IIB subunit JHS88_18775 IPR036095 PTS system IIB component-like superfamily JHS88_18775 IPR013011 Phosphotransferase system, EIIB component, type 2 JHS88_18775 IPR003501 Phosphotransferase system, EIIB component, type 2/3 JHS88_18775 IPR003352 Phosphotransferase system, EIIC JHS88_18775 IPR013014 Phosphotransferase system, EIIC component, type 2 JHS88_18785 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JHS88_18785 IPR001036 Acriflavin resistance protein JHS88_18795 IPR006143 RND efflux pump, membrane fusion protein JHS88_18795 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain JHS88_18795 IPR030190 Macrolide export protein MacA JHS88_18805 IPR006223 Glycine cleavage system T protein JHS88_18805 IPR022903 Glycine cleavage system T protein, bacteria JHS88_18805 IPR028896 Aminomethyltransferase-like JHS88_18805 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain JHS88_18805 IPR006222 Aminomethyltransferase, folate-binding domain JHS88_18805 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal JHS88_18805 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 JHS88_18815 IPR015424 Pyridoxal phosphate-dependent transferase JHS88_18815 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JHS88_18815 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JHS88_18815 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site JHS88_18815 IPR039429 Serine hydroxymethyltransferase-like domain JHS88_18815 IPR001085 Serine hydroxymethyltransferase JHS88_18820 IPR011053 Single hybrid motif JHS88_18820 IPR017453 Glycine cleavage system H-protein, subgroup JHS88_18820 IPR033753 Glycine cleavage system H-protein/Simiate JHS88_18820 IPR002930 Glycine cleavage system H-protein JHS88_18820 IPR000089 Biotin/lipoyl attachment JHS88_18825 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JHS88_18825 IPR003437 Glycine dehydrogenase (decarboxylating) JHS88_18825 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JHS88_18825 IPR015424 Pyridoxal phosphate-dependent transferase JHS88_18825 IPR020581 Glycine cleavage system P protein JHS88_18870 IPR029045 ClpP/crotonase-like domain superfamily JHS88_18870 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal JHS88_18870 IPR041010 Acetyl-coA carboxylase zinc finger domain JHS88_18870 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit JHS88_18870 IPR034733 Acetyl-CoA carboxylase JHS88_18875 IPR005119 LysR, substrate-binding JHS88_18875 IPR000847 Transcription regulator HTH, LysR JHS88_18875 IPR036390 Winged helix DNA-binding domain superfamily JHS88_18875 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_18880 IPR029460 DNA polymerase, helix-hairpin-helix motif JHS88_18880 IPR024754 DNA polymerase III polC-like, N-terminal domain II JHS88_18880 IPR040982 DNA polymerase III alpha subunit finger domain JHS88_18880 IPR012340 Nucleic acid-binding, OB-fold JHS88_18880 IPR003141 Polymerase/histidinol phosphatase, N-terminal JHS88_18880 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain JHS88_18880 IPR004013 PHP domain JHS88_18880 IPR013520 Exonuclease, RNase T/DNA polymerase III JHS88_18880 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain JHS88_18880 IPR036397 Ribonuclease H superfamily JHS88_18880 IPR012337 Ribonuclease H-like superfamily JHS88_18880 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type JHS88_18905 IPR036541 Phospholipase A1 superfamily JHS88_18905 IPR003187 Phospholipase A1 JHS88_18915 IPR000551 MerR-type HTH domain JHS88_18915 IPR015358 Transcription regulator MerR, DNA binding JHS88_18915 IPR009061 Putative DNA-binding domain superfamily JHS88_18915 IPR011789 Cu(I)-responsive transcriptional regulator JHS88_18920 IPR023635 Peptide deformylase JHS88_18920 IPR036821 Peptide deformylase superfamily JHS88_18950 IPR006669 Magnesium transporter MgtE JHS88_18950 IPR038048 Magnesium transporter MgtE, transmembrane domain JHS88_18950 IPR038076 MgtE, N-terminal domain superfamily JHS88_18950 IPR006668 Magnesium transporter, MgtE intracellular domain JHS88_18950 IPR000644 CBS domain JHS88_18950 IPR006667 SLC41 divalent cation transporters, integral membrane domain JHS88_18950 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily JHS88_18970 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JHS88_18970 IPR004361 Glyoxalase I JHS88_18970 IPR018146 Glyoxalase I, conserved site JHS88_18970 IPR037523 Vicinal oxygen chelate (VOC) domain JHS88_18970 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JHS88_18975 IPR013785 Aldolase-type TIM barrel JHS88_18975 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal JHS88_18985 IPR002656 Acyltransferase 3 JHS88_18985 IPR036514 SGNH hydrolase superfamily JHS88_18995 IPR024467 Domain of unknown function DUF2384 JHS88_18995 IPR011979 Conserved hypothetical protein CHP02293 JHS88_19000 IPR000763 Catalase-peroxidase haem JHS88_19000 IPR002016 Haem peroxidase JHS88_19000 IPR010255 Haem peroxidase superfamily JHS88_19000 IPR019794 Peroxidase, active site JHS88_19005 IPR013785 Aldolase-type TIM barrel JHS88_19005 IPR002932 Glutamate synthase domain JHS88_19005 IPR024188 Glutamate synthase large subunit-like protein JHS88_19005 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JHS88_19005 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site JHS88_19015 IPR001789 Signal transduction response regulator, receiver domain JHS88_19015 IPR024187 Signal transduction response regulator, citrate/malate metabolism JHS88_19015 IPR011006 CheY-like superfamily JHS88_19015 IPR028141 Transcriptional regulator JHS88_19020 IPR013767 PAS fold JHS88_19020 IPR005467 Histidine kinase domain JHS88_19020 IPR035965 PAS domain superfamily JHS88_19020 IPR033463 Single cache domain 3 JHS88_19020 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_19020 IPR029151 Periplasmic sensor-like domain superfamily JHS88_19020 IPR000014 PAS domain JHS88_19020 IPR039506 SpoOB, alpha-helical domain JHS88_19020 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB JHS88_19020 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JHS88_19020 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_19025 IPR030676 Citrate carrier CitT-related JHS88_19025 IPR001898 Solute carrier family 13 JHS88_19030 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent JHS88_19030 IPR016162 Aldehyde dehydrogenase, N-terminal JHS88_19030 IPR029510 Aldehyde dehydrogenase, glutamic acid active site JHS88_19030 IPR015590 Aldehyde dehydrogenase domain JHS88_19030 IPR016161 Aldehyde/histidinol dehydrogenase JHS88_19030 IPR016163 Aldehyde dehydrogenase, C-terminal JHS88_19050 IPR000620 EamA domain JHS88_19055 IPR000390 Small multidrug resistance protein family JHS88_19060 IPR013856 Peptidase M4 domain JHS88_19060 IPR001570 Peptidase M4, C-terminal JHS88_19060 IPR027268 Peptidase M4/M1, CTD superfamily JHS88_19060 IPR023612 Peptidase M4 JHS88_19060 IPR007280 Peptidase, C-terminal, archaeal/bacterial JHS88_19060 IPR025711 PepSY domain JHS88_19060 IPR011096 FTP domain JHS88_19070 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase JHS88_19070 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily JHS88_19080 IPR000620 EamA domain JHS88_19080 IPR004626 RarD protein JHS88_19095 IPR024181 Chemotaxis response regulator CheV JHS88_19095 IPR036061 CheW-like domain superfamily JHS88_19095 IPR002545 CheW-like domain JHS88_19095 IPR011006 CheY-like superfamily JHS88_19095 IPR001789 Signal transduction response regulator, receiver domain JHS88_19115 IPR011006 CheY-like superfamily JHS88_19115 IPR001789 Signal transduction response regulator, receiver domain JHS88_19115 IPR000792 Transcription regulator LuxR, C-terminal JHS88_19125 IPR039435 Diguanylate cyclase DosC, globin sensor domain JHS88_19125 IPR000160 GGDEF domain JHS88_19125 IPR009050 Globin-like superfamily JHS88_19125 IPR012292 Globin/Protoglobin JHS88_19125 IPR029787 Nucleotide cyclase JHS88_19130 IPR011006 CheY-like superfamily JHS88_19130 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_19130 IPR016032 Signal transduction response regulator, C-terminal effector JHS88_19130 IPR001789 Signal transduction response regulator, receiver domain JHS88_19130 IPR000792 Transcription regulator LuxR, C-terminal JHS88_19135 IPR001633 EAL domain JHS88_19135 IPR000014 PAS domain JHS88_19135 IPR035965 PAS domain superfamily JHS88_19135 IPR035919 EAL domain superfamily JHS88_19135 IPR029787 Nucleotide cyclase JHS88_19135 IPR005330 MHYT domain JHS88_19135 IPR000160 GGDEF domain JHS88_19140 IPR001789 Signal transduction response regulator, receiver domain JHS88_19140 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JHS88_19140 IPR038388 RcsC, C-terminal domain superfamily JHS88_19140 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal JHS88_19140 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JHS88_19140 IPR011006 CheY-like superfamily JHS88_19140 IPR030856 Sensor histidine kinase RcsC JHS88_19140 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_19140 IPR005467 Histidine kinase domain JHS88_19140 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JHS88_19140 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_19150 IPR005119 LysR, substrate-binding JHS88_19150 IPR000847 Transcription regulator HTH, LysR JHS88_19150 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_19150 IPR036390 Winged helix DNA-binding domain superfamily JHS88_19165 IPR008722 Outer membrane porin F, N-terminal JHS88_19165 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel JHS88_19165 IPR006664 Outer membrane protein, bacterial JHS88_19165 IPR006665 OmpA-like domain JHS88_19165 IPR006690 Outer membrane protein, OmpA-like, conserved site JHS88_19165 IPR028974 TSP type-3 repeat JHS88_19165 IPR036737 OmpA-like domain superfamily JHS88_19200 IPR025668 Transposase DDE domain JHS88_19210 IPR022399 Helicase/secretion neighbourhood ATPase JHS88_19210 IPR001482 Type II/IV secretion system protein JHS88_19210 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_19225 IPR004846 Type II/III secretion system JHS88_19225 IPR014004 Transport-associated and nodulation domain, bacteria JHS88_19225 IPR007055 BON domain JHS88_19225 IPR001775 GspD/PilQ family JHS88_19225 IPR032789 Pilus formation protein, N-terminal JHS88_19245 IPR000847 Transcription regulator HTH, LysR JHS88_19245 IPR005119 LysR, substrate-binding JHS88_19245 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_19245 IPR036390 Winged helix DNA-binding domain superfamily JHS88_19245 IPR020890 Transcription regulator HTH, HdfR JHS88_19250 IPR020449 Transcription regulator HTH, AraC- type JHS88_19250 IPR018062 HTH domain AraC-type, conserved site JHS88_19250 IPR009057 Homeobox-like domain superfamily JHS88_19250 IPR018060 DNA binding HTH domain, AraC-type JHS88_19260 IPR007280 Peptidase, C-terminal, archaeal/bacterial JHS88_19260 IPR002169 Peptidase M9A/M9B, collagenase, bacterial JHS88_19260 IPR013661 Peptidase M9, collagenase, N-terminal domain JHS88_19270 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain JHS88_19270 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily JHS88_19270 IPR019991 GTP-binding protein, ribosome biogenesis JHS88_19270 IPR006073 GTP binding domain JHS88_19270 IPR016478 GTPase, MTG1 JHS88_19270 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_19275 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JHS88_19275 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JHS88_19275 IPR004839 Aminotransferase, class I/classII JHS88_19275 IPR015424 Pyridoxal phosphate-dependent transferase JHS88_19280 IPR011006 CheY-like superfamily JHS88_19280 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_19280 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_19280 IPR005467 Histidine kinase domain JHS88_19280 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JHS88_19280 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JHS88_19280 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JHS88_19280 IPR001789 Signal transduction response regulator, receiver domain JHS88_19290 IPR006464 N-acetyltransferase RimI/Ard1 JHS88_19290 IPR000182 GNAT domain JHS88_19290 IPR000905 Gcp-like domain JHS88_19290 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB JHS88_19290 IPR016181 Acyl-CoA N-acyltransferase JHS88_19300 IPR004669 C4-dicarboxylate anaerobic carrier JHS88_19300 IPR018385 C4-dicarboxylate anaerobic carrier-like JHS88_19305 IPR023353 LemA-like domain superfamily JHS88_19305 IPR007156 LemA JHS88_19310 IPR022919 Peptidase M48, protease HtpX, putative JHS88_19310 IPR001915 Peptidase M48 JHS88_19325 IPR040603 Fanconi-associated nuclease 1, SAP domain JHS88_19325 IPR014883 VRR-NUC domain JHS88_19325 IPR033315 Fanconi-associated nuclease 1-like JHS88_19325 IPR011856 tRNA endonuclease-like domain superfamily JHS88_19335 IPR007197 Radical SAM JHS88_19335 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme JHS88_19335 IPR023885 4Fe4S-binding SPASM domain JHS88_19335 IPR013785 Aldolase-type TIM barrel JHS88_19350 IPR016052 Bacteriophage 933W, L0136 JHS88_19350 IPR005220 Bacterial OB-fold JHS88_19350 IPR036700 Bacterial OB-fold superfamily JHS88_19355 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal JHS88_19355 IPR001206 Diacylglycerol kinase, catalytic domain JHS88_19355 IPR005218 Diacylglycerol/lipid kinase JHS88_19355 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily JHS88_19355 IPR022433 Lipid kinase YegS JHS88_19360 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_19360 IPR000847 Transcription regulator HTH, LysR JHS88_19360 IPR005119 LysR, substrate-binding JHS88_19360 IPR036390 Winged helix DNA-binding domain superfamily JHS88_19365 IPR016192 APOBEC/CMP deaminase, zinc-binding JHS88_19365 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal JHS88_19365 IPR011549 Riboflavin-specific deaminase, C-terminal JHS88_19365 IPR024072 Dihydrofolate reductase-like domain superfamily JHS88_19365 IPR004794 Riboflavin biosynthesis protein RibD JHS88_19365 IPR002125 Cytidine and deoxycytidylate deaminase domain JHS88_19365 IPR016193 Cytidine deaminase-like JHS88_19380 IPR033881 von Willebrand factor domain BatA-type JHS88_19380 IPR002035 von Willebrand factor, type A JHS88_19380 IPR036465 von Willebrand factor A-like domain superfamily JHS88_19395 IPR041628 ChlI/MoxR, AAA lid domain JHS88_19395 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_19395 IPR011703 ATPase, AAA-3 JHS88_19400 IPR007197 Radical SAM JHS88_19400 IPR023885 4Fe4S-binding SPASM domain JHS88_19400 IPR013785 Aldolase-type TIM barrel JHS88_19400 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme JHS88_19405 IPR000917 Sulfatase, N-terminal JHS88_19405 IPR024607 Sulfatase, conserved site JHS88_19405 IPR017850 Alkaline-phosphatase-like, core domain superfamily JHS88_19410 IPR005119 LysR, substrate-binding JHS88_19410 IPR036390 Winged helix DNA-binding domain superfamily JHS88_19410 IPR000847 Transcription regulator HTH, LysR JHS88_19410 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_19420 IPR017850 Alkaline-phosphatase-like, core domain superfamily JHS88_19420 IPR024607 Sulfatase, conserved site JHS88_19420 IPR000917 Sulfatase, N-terminal JHS88_19425 IPR000917 Sulfatase, N-terminal JHS88_19425 IPR032158 Domain of unknown function DUF4994 JHS88_19425 IPR017850 Alkaline-phosphatase-like, core domain superfamily JHS88_19425 IPR024607 Sulfatase, conserved site JHS88_19430 IPR001789 Signal transduction response regulator, receiver domain JHS88_19430 IPR001867 OmpR/PhoB-type DNA-binding domain JHS88_19430 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_19430 IPR011006 CheY-like superfamily JHS88_19430 IPR039420 Transcriptional regulatory protein WalR-like JHS88_19445 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_19445 IPR005467 Histidine kinase domain JHS88_19445 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JHS88_19445 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JHS88_19445 IPR036641 HPT domain superfamily JHS88_19445 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain JHS88_19445 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JHS88_19445 IPR001789 Signal transduction response regulator, receiver domain JHS88_19445 IPR038188 TorS, sensor domain superfamily JHS88_19445 IPR011006 CheY-like superfamily JHS88_19445 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_19445 IPR037952 Sensor histidine kinase TorS, sensor domain JHS88_19445 IPR003660 HAMP domain JHS88_19450 IPR014301 TMAO reductase system, periplasmic protein TorT JHS88_19450 IPR028082 Periplasmic binding protein-like I JHS88_19450 IPR001761 Periplasmic binding protein/LacI sugar binding domain JHS88_19455 IPR004363 Methylglyoxal synthase JHS88_19455 IPR018148 Methylglyoxal synthase, active site JHS88_19455 IPR011607 Methylglyoxal synthase-like domain JHS88_19455 IPR036914 Methylglyoxal synthase-like domain superfamily JHS88_19460 IPR014016 UvrD-like helicase, ATP-binding domain JHS88_19460 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_19460 IPR034739 UvrD/AddA helicase, N-terminal JHS88_19460 IPR000212 DNA helicase, UvrD/REP type JHS88_19460 IPR014017 UvrD-like DNA helicase, C-terminal JHS88_19460 IPR022161 DNA helicase IV, N-terminal domain JHS88_19465 IPR010019 Integral membrane protein, YccS JHS88_19465 IPR010020 Integral membrane protein, YccS/YhfK JHS88_19465 IPR032692 Integral membrane protein YccS, N-terminal JHS88_19495 IPR039426 Vitamin B12 transporter BtuB-like JHS88_19495 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor JHS88_19495 IPR000531 TonB-dependent receptor-like, beta-barrel JHS88_19495 IPR037066 TonB-dependent receptor, plug domain superfamily JHS88_19495 IPR012910 TonB-dependent receptor, plug domain JHS88_19495 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily JHS88_19505 IPR000551 MerR-type HTH domain JHS88_19505 IPR009061 Putative DNA-binding domain superfamily JHS88_19505 IPR011789 Cu(I)-responsive transcriptional regulator JHS88_19510 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_19510 IPR017871 ABC transporter, conserved site JHS88_19510 IPR003439 ABC transporter-like JHS88_19510 IPR003593 AAA+ ATPase domain JHS88_19515 IPR037294 ABC transporter, BtuC-like JHS88_19515 IPR000522 ABC transporter, permease protein, BtuC-like JHS88_19520 IPR037294 ABC transporter, BtuC-like JHS88_19520 IPR000522 ABC transporter, permease protein, BtuC-like JHS88_19525 IPR002491 ABC transporter periplasmic binding domain JHS88_19525 IPR033870 FatB domain JHS88_19545 IPR036182 Copper chaperone PCuAC superfamily JHS88_19545 IPR007410 Copper chaperone PCuAC JHS88_19550 IPR013126 Heat shock protein 70 family JHS88_19550 IPR042054 YegD-like JHS88_19550 IPR018181 Heat shock protein 70, conserved site JHS88_19565 IPR029061 Thiamin diphosphate-binding fold JHS88_19565 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha JHS88_19565 IPR001017 Dehydrogenase, E1 component JHS88_19570 IPR005475 Transketolase-like, pyrimidine-binding domain JHS88_19570 IPR033248 Transketolase, C-terminal domain JHS88_19570 IPR029061 Thiamin diphosphate-binding fold JHS88_19570 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II JHS88_19575 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site JHS88_19575 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain JHS88_19575 IPR011053 Single hybrid motif JHS88_19575 IPR000089 Biotin/lipoyl attachment JHS88_19575 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily JHS88_19575 IPR036625 E3-binding domain superfamily JHS88_19575 IPR004167 Peripheral subunit-binding domain JHS88_19580 IPR040156 Electron transfer flavoprotein-ubiquinone oxidoreductase JHS88_19580 IPR036188 FAD/NAD(P)-binding domain superfamily JHS88_19580 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain JHS88_19585 IPR034341 Stringent starvation protein A, N-terminal JHS88_19585 IPR036249 Thioredoxin-like superfamily JHS88_19585 IPR004046 Glutathione S-transferase, C-terminal JHS88_19585 IPR010987 Glutathione S-transferase, C-terminal-like JHS88_19585 IPR040079 Glutathione Transferase family JHS88_19585 IPR036282 Glutathione S-transferase, C-terminal domain superfamily JHS88_19585 IPR004045 Glutathione S-transferase, N-terminal JHS88_19590 IPR036390 Winged helix DNA-binding domain superfamily JHS88_19590 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_19590 IPR000847 Transcription regulator HTH, LysR JHS88_19590 IPR005119 LysR, substrate-binding JHS88_19600 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain JHS88_19600 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JHS88_19600 IPR035906 MetI-like superfamily JHS88_19605 IPR035906 MetI-like superfamily JHS88_19605 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JHS88_19605 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain JHS88_19610 IPR018313 Solute-binding protein family 3, conserved site JHS88_19610 IPR001320 Ionotropic glutamate receptor JHS88_19610 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter JHS88_19610 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JHS88_19615 IPR003593 AAA+ ATPase domain JHS88_19615 IPR003439 ABC transporter-like JHS88_19615 IPR017871 ABC transporter, conserved site JHS88_19615 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_19615 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type JHS88_19620 IPR005119 LysR, substrate-binding JHS88_19620 IPR000847 Transcription regulator HTH, LysR JHS88_19620 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_19620 IPR036390 Winged helix DNA-binding domain superfamily JHS88_19635 IPR000847 Transcription regulator HTH, LysR JHS88_19635 IPR005119 LysR, substrate-binding JHS88_19635 IPR036390 Winged helix DNA-binding domain superfamily JHS88_19635 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_19635 IPR023746 Transcription regulator HTH, YidZ JHS88_19635 IPR037402 HTH-type transcriptional regulator YidZ, PBP2 domain JHS88_19640 IPR006094 FAD linked oxidase, N-terminal JHS88_19640 IPR012951 Berberine/berberine-like JHS88_19640 IPR016166 FAD-binding domain, PCMH-type JHS88_19640 IPR036318 FAD-binding, type PCMH-like superfamily JHS88_19640 IPR016167 FAD-binding, type PCMH, subdomain 1 JHS88_19640 IPR016169 FAD-binding, type PCMH, subdomain 2 JHS88_19640 IPR016164 FAD-linked oxidase-like, C-terminal JHS88_19640 IPR006093 Oxygen oxidoreductase covalent FAD-binding site JHS88_19645 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal JHS88_19645 IPR023663 NADPH dehydrogenase JHS88_19645 IPR013785 Aldolase-type TIM barrel JHS88_19660 IPR025668 Transposase DDE domain JHS88_19665 IPR006369 Protohaem IX farnesyltransferase JHS88_19665 IPR000537 UbiA prenyltransferase family JHS88_19665 IPR030470 UbiA prenyltransferase conserved site JHS88_19675 IPR024791 Cytochrome c oxidase subunit III JHS88_19675 IPR000298 Cytochrome c oxidase subunit III-like JHS88_19675 IPR035973 Cytochrome c oxidase subunit III-like superfamily JHS88_19675 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle JHS88_19675 IPR014206 Cytochrome o ubiquinol oxidase, subunit III JHS88_19675 IPR033946 Ubiquinol oxidase subunit III domain JHS88_19680 IPR000883 Cytochrome c oxidase subunit I JHS88_19680 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site JHS88_19680 IPR036927 Cytochrome c oxidase-like, subunit I superfamily JHS88_19680 IPR014207 Cytochrome o ubiquinol oxidase, subunit I JHS88_19680 IPR023616 Cytochrome c oxidase-like, subunit I domain JHS88_19685 IPR006333 Cytochrome o ubiquinol oxidase subunit II JHS88_19685 IPR002429 Cytochrome c oxidase subunit II-like C-terminal JHS88_19685 IPR010514 COX aromatic rich motif JHS88_19685 IPR008972 Cupredoxin JHS88_19685 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain JHS88_19685 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain JHS88_19685 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily JHS88_19690 IPR002347 Short-chain dehydrogenase/reductase SDR JHS88_19690 IPR020904 Short-chain dehydrogenase/reductase, conserved site JHS88_19690 IPR036291 NAD(P)-binding domain superfamily JHS88_19690 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase JHS88_19695 IPR011548 3-hydroxyisobutyrate dehydrogenase JHS88_19695 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding JHS88_19695 IPR013328 6-phosphogluconate dehydrogenase, domain 2 JHS88_19695 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily JHS88_19695 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site JHS88_19695 IPR015815 3-hydroxyisobutyrate dehydrogenase-related JHS88_19695 IPR036291 NAD(P)-binding domain superfamily JHS88_19695 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain JHS88_19700 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site JHS88_19700 IPR029045 ClpP/crotonase-like domain superfamily JHS88_19700 IPR001753 Enoyl-CoA hydratase/isomerase JHS88_19700 IPR014748 Enoyl-CoA hydratase, C-terminal JHS88_19705 IPR014748 Enoyl-CoA hydratase, C-terminal JHS88_19705 IPR001753 Enoyl-CoA hydratase/isomerase JHS88_19705 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site JHS88_19705 IPR029045 ClpP/crotonase-like domain superfamily JHS88_19710 IPR006089 Acyl-CoA dehydrogenase, conserved site JHS88_19710 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal JHS88_19710 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain JHS88_19710 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily JHS88_19710 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily JHS88_19710 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal JHS88_19710 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal JHS88_19715 IPR016161 Aldehyde/histidinol dehydrogenase JHS88_19715 IPR010061 Methylmalonate-semialdehyde dehydrogenase JHS88_19715 IPR015590 Aldehyde dehydrogenase domain JHS88_19715 IPR016162 Aldehyde dehydrogenase, N-terminal JHS88_19715 IPR016160 Aldehyde dehydrogenase, cysteine active site JHS88_19715 IPR016163 Aldehyde dehydrogenase, C-terminal JHS88_19720 IPR020617 Thiolase, C-terminal JHS88_19720 IPR020616 Thiolase, N-terminal JHS88_19720 IPR020613 Thiolase, conserved site JHS88_19720 IPR002155 Thiolase JHS88_19720 IPR016039 Thiolase-like JHS88_19720 IPR020615 Thiolase, acyl-enzyme intermediate active site JHS88_19720 IPR020610 Thiolase, active site JHS88_19725 IPR009061 Putative DNA-binding domain superfamily JHS88_19725 IPR011789 Cu(I)-responsive transcriptional regulator JHS88_19725 IPR015358 Transcription regulator MerR, DNA binding JHS88_19725 IPR000551 MerR-type HTH domain JHS88_19730 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal JHS88_19730 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily JHS88_19730 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal JHS88_19730 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain JHS88_19730 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily JHS88_19730 IPR006089 Acyl-CoA dehydrogenase, conserved site JHS88_19730 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal JHS88_19735 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal JHS88_19735 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal JHS88_19735 IPR034733 Acetyl-CoA carboxylase JHS88_19735 IPR029045 ClpP/crotonase-like domain superfamily JHS88_19740 IPR029045 ClpP/crotonase-like domain superfamily JHS88_19740 IPR014748 Enoyl-CoA hydratase, C-terminal JHS88_19740 IPR001753 Enoyl-CoA hydratase/isomerase JHS88_19740 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site JHS88_19745 IPR000891 Pyruvate carboxyltransferase JHS88_19745 IPR013785 Aldolase-type TIM barrel JHS88_19745 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site JHS88_19750 IPR019275 Protein of unknown function DUF2301 JHS88_19760 IPR035965 PAS domain superfamily JHS88_19760 IPR004090 Chemotaxis methyl-accepting receptor JHS88_19760 IPR013655 PAS fold-3 JHS88_19760 IPR000014 PAS domain JHS88_19760 IPR001610 PAC motif JHS88_19760 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JHS88_19760 IPR000700 PAS-associated, C-terminal JHS88_19765 IPR000890 Aliphatic acid kinase, short-chain JHS88_19765 IPR004372 Acetate/propionate kinase JHS88_19765 IPR023865 Aliphatic acid kinase, short-chain, conserved site JHS88_19770 IPR000160 GGDEF domain JHS88_19770 IPR001633 EAL domain JHS88_19770 IPR035919 EAL domain superfamily JHS88_19770 IPR035965 PAS domain superfamily JHS88_19770 IPR000014 PAS domain JHS88_19770 IPR029787 Nucleotide cyclase JHS88_19775 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_19775 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site JHS88_19775 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily JHS88_19775 IPR001650 Helicase, C-terminal JHS88_19775 IPR014001 Helicase superfamily 1/2, ATP-binding domain JHS88_19775 IPR028618 ATP-dependent RNA helicase DeaD JHS88_19775 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain JHS88_19775 IPR034415 CsdA, RNA recognition motif JHS88_19775 IPR014014 RNA helicase, DEAD-box type, Q motif JHS88_19775 IPR011545 DEAD/DEAH box helicase domain JHS88_19780 IPR001900 Ribonuclease II/R JHS88_19780 IPR004476 Ribonuclease II/ribonuclease R JHS88_19780 IPR022966 Ribonuclease II/R, conserved site JHS88_19780 IPR011804 Ribonuclease II JHS88_19780 IPR013223 Ribonuclease B, N-terminal OB domain JHS88_19780 IPR012340 Nucleic acid-binding, OB-fold JHS88_19780 IPR011129 Cold shock domain JHS88_19780 IPR003029 S1 domain JHS88_19785 IPR018062 HTH domain AraC-type, conserved site JHS88_19785 IPR020449 Transcription regulator HTH, AraC- type JHS88_19785 IPR018060 DNA binding HTH domain, AraC-type JHS88_19785 IPR009057 Homeobox-like domain superfamily JHS88_19795 IPR024370 PBP domain JHS88_19800 IPR029069 HotDog domain superfamily JHS88_19800 IPR002539 MaoC-like dehydratase domain JHS88_19800 IPR039375 Nodulation protein N-like JHS88_19815 IPR004090 Chemotaxis methyl-accepting receptor JHS88_19815 IPR003660 HAMP domain JHS88_19815 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain JHS88_19815 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JHS88_19815 IPR000727 Target SNARE coiled-coil homology domain JHS88_19820 IPR003439 ABC transporter-like JHS88_19820 IPR003593 AAA+ ATPase domain JHS88_19820 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_19825 IPR035919 EAL domain superfamily JHS88_19825 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain JHS88_19825 IPR001633 EAL domain JHS88_19845 IPR014001 Helicase superfamily 1/2, ATP-binding domain JHS88_19845 IPR001650 Helicase, C-terminal JHS88_19845 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_19845 IPR028622 ATP-dependent RNA helicase RhlE JHS88_19845 IPR014014 RNA helicase, DEAD-box type, Q motif JHS88_19845 IPR011545 DEAD/DEAH box helicase domain JHS88_19845 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site JHS88_19850 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal JHS88_19850 IPR003495 CobW/HypB/UreG, nucleotide-binding domain JHS88_19850 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_19860 IPR000816 Peptidase C15, pyroglutamyl peptidase I JHS88_19860 IPR033694 Pyroglutamyl peptidase I, Cys active site JHS88_19860 IPR033693 Pyroglutamyl peptidase I, Glu active site JHS88_19860 IPR029762 Pyroglutamyl peptidase I, bacterial-type JHS88_19860 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily JHS88_19860 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like JHS88_19870 IPR001926 Pyridoxal-phosphate dependent enzyme JHS88_19870 IPR006653 Tryptophan synthase, beta chain, conserved site JHS88_19870 IPR006654 Tryptophan synthase, beta chain JHS88_19870 IPR023026 Tryptophan synthase beta chain/beta chain-like JHS88_19870 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme JHS88_19875 IPR018668 DNA-binding protein VF530-like JHS88_19875 IPR036361 SAP domain superfamily JHS88_19880 IPR011545 DEAD/DEAH box helicase domain JHS88_19880 IPR028622 ATP-dependent RNA helicase RhlE JHS88_19880 IPR001650 Helicase, C-terminal JHS88_19880 IPR014001 Helicase superfamily 1/2, ATP-binding domain JHS88_19880 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site JHS88_19880 IPR014014 RNA helicase, DEAD-box type, Q motif JHS88_19880 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_19885 IPR024530 Putative quorum-sensing-regulated virulence factor JHS88_19905 IPR001533 Pterin 4 alpha carbinolamine dehydratase JHS88_19905 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily JHS88_19910 IPR005960 Phenylalanine-4-hydroxylase, monomeric form JHS88_19910 IPR019774 Aromatic amino acid hydroxylase, C-terminal JHS88_19910 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily JHS88_19910 IPR036951 Aromatic amino acid hydroxylase superfamily JHS88_19910 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site JHS88_19910 IPR001273 Aromatic amino acid hydroxylase JHS88_19915 IPR042099 AMP-dependent synthetase-like superfamily JHS88_19915 IPR000873 AMP-dependent synthetase/ligase JHS88_19915 IPR020845 AMP-binding, conserved site JHS88_19915 IPR005914 Acetoacetyl-CoA synthase JHS88_19915 IPR025110 AMP-binding enzyme, C-terminal domain JHS88_19920 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_19920 IPR010233 Ubiquinone biosynthesis O-methyltransferase JHS88_19925 IPR005119 LysR, substrate-binding JHS88_19925 IPR000847 Transcription regulator HTH, LysR JHS88_19925 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_19925 IPR036390 Winged helix DNA-binding domain superfamily JHS88_19945 IPR000620 EamA domain JHS88_19955 IPR026041 Glyoxalase ElbB JHS88_19955 IPR029062 Class I glutamine amidotransferase-like JHS88_19960 IPR039697 Iron-type alcohol dehydrogenase-like JHS88_19960 IPR018211 Alcohol dehydrogenase, iron-type, conserved site JHS88_19960 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA JHS88_19965 IPR012938 Glucose/Sorbosone dehydrogenase JHS88_19965 IPR011042 Six-bladed beta-propeller, TolB-like JHS88_19965 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase JHS88_19975 IPR023188 DNA-binding protein Dps, conserved site JHS88_19975 IPR002177 DNA-binding protein Dps JHS88_19975 IPR009078 Ferritin-like superfamily JHS88_19975 IPR008331 Ferritin/DPS protein domain JHS88_19975 IPR012347 Ferritin-like JHS88_19980 IPR033480 Single Cache domain 2 JHS88_19980 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JHS88_19980 IPR003660 HAMP domain JHS88_19980 IPR004090 Chemotaxis methyl-accepting receptor JHS88_19990 IPR017871 ABC transporter, conserved site JHS88_19990 IPR025857 MacB-like periplasmic core domain JHS88_19990 IPR003593 AAA+ ATPase domain JHS88_19990 IPR003838 ABC transporter permease protein domain JHS88_19990 IPR003439 ABC transporter-like JHS88_19990 IPR017911 ABC transporter, macrolide export, ATP-binding domain JHS88_19990 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_19995 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_19995 IPR025857 MacB-like periplasmic core domain JHS88_19995 IPR017911 ABC transporter, macrolide export, ATP-binding domain JHS88_19995 IPR017871 ABC transporter, conserved site JHS88_19995 IPR003439 ABC transporter-like JHS88_19995 IPR003838 ABC transporter permease protein domain JHS88_19995 IPR003593 AAA+ ATPase domain JHS88_20010 IPR029787 Nucleotide cyclase JHS88_20010 IPR000160 GGDEF domain JHS88_20015 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JHS88_20015 IPR004090 Chemotaxis methyl-accepting receptor JHS88_20015 IPR013655 PAS fold-3 JHS88_20015 IPR035965 PAS domain superfamily JHS88_20015 IPR000700 PAS-associated, C-terminal JHS88_20015 IPR000014 PAS domain JHS88_20015 IPR001610 PAC motif JHS88_20025 IPR012156 Cold shock, CspA JHS88_20025 IPR011129 Cold shock domain JHS88_20025 IPR019844 Cold-shock (CSD) domain JHS88_20025 IPR002059 Cold-shock protein, DNA-binding JHS88_20025 IPR012340 Nucleic acid-binding, OB-fold JHS88_20055 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily JHS88_20055 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal JHS88_20055 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain JHS88_20060 IPR006369 Protohaem IX farnesyltransferase JHS88_20060 IPR000537 UbiA prenyltransferase family JHS88_20060 IPR030470 UbiA prenyltransferase conserved site JHS88_20065 IPR003780 COX15/CtaA family JHS88_20065 IPR023754 Heme A synthase, type 2 JHS88_20085 IPR000298 Cytochrome c oxidase subunit III-like JHS88_20085 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle JHS88_20085 IPR024791 Cytochrome c oxidase subunit III JHS88_20085 IPR033945 Cytochrome c oxidase subunit III domain JHS88_20085 IPR035973 Cytochrome c oxidase subunit III-like superfamily JHS88_20090 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 JHS88_20090 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily JHS88_20095 IPR033944 Cytochrome c oxidase subunit I domain JHS88_20095 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site JHS88_20095 IPR000883 Cytochrome c oxidase subunit I JHS88_20095 IPR036927 Cytochrome c oxidase-like, subunit I superfamily JHS88_20095 IPR023616 Cytochrome c oxidase-like, subunit I domain JHS88_20095 IPR014241 Cytochrome c oxidase, subunit I bacterial type JHS88_20100 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain JHS88_20100 IPR014222 Cytochrome c oxidase, subunit II JHS88_20100 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily JHS88_20100 IPR005728 Rickettsial palindromic element JHS88_20100 IPR008972 Cupredoxin JHS88_20100 IPR001505 Copper centre Cu(A) JHS88_20100 IPR034210 Cytochrome c oxidase subunit 2, C-terminal JHS88_20100 IPR002429 Cytochrome c oxidase subunit II-like C-terminal JHS88_20105 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I JHS88_20105 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III JHS88_20105 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II JHS88_20105 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III JHS88_20105 IPR005843 Alpha-D-phosphohexomutase, C-terminal JHS88_20105 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily JHS88_20105 IPR016066 Alpha-D-phosphohexomutase, conserved site JHS88_20105 IPR005841 Alpha-D-phosphohexomutase superfamily JHS88_20115 IPR001123 Amino acid exporter protein, LeuE-type JHS88_20115 IPR004778 Homoserine/Threonine efflux protein JHS88_20120 IPR018060 DNA binding HTH domain, AraC-type JHS88_20120 IPR009057 Homeobox-like domain superfamily JHS88_20120 IPR020449 Transcription regulator HTH, AraC- type JHS88_20135 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily JHS88_20135 IPR011234 Fumarylacetoacetase-like, C-terminal JHS88_20145 IPR023614 Porin domain superfamily JHS88_20145 IPR033900 Porin domain, Gram-negative type JHS88_20145 IPR001897 Porin, gammaproteobacterial JHS88_20145 IPR001702 Porin, Gram-negative type JHS88_20145 IPR013793 Porin, Gram-negative type, conserved site JHS88_20150 IPR000620 EamA domain JHS88_20155 IPR002109 Glutaredoxin JHS88_20155 IPR014025 Glutaredoxin subgroup JHS88_20155 IPR011900 Glutaredoxin, GrxC JHS88_20155 IPR036249 Thioredoxin-like superfamily JHS88_20155 IPR011767 Glutaredoxin active site JHS88_20165 IPR004734 Multidrug resistance protein JHS88_20165 IPR036259 MFS transporter superfamily JHS88_20165 IPR020846 Major facilitator superfamily domain JHS88_20165 IPR011701 Major facilitator superfamily JHS88_20170 IPR036390 Winged helix DNA-binding domain superfamily JHS88_20170 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_20170 IPR000847 Transcription regulator HTH, LysR JHS88_20170 IPR005119 LysR, substrate-binding JHS88_20175 IPR001633 EAL domain JHS88_20175 IPR029787 Nucleotide cyclase JHS88_20175 IPR001610 PAC motif JHS88_20175 IPR000014 PAS domain JHS88_20175 IPR000700 PAS-associated, C-terminal JHS88_20175 IPR035965 PAS domain superfamily JHS88_20175 IPR013656 PAS fold-4 JHS88_20175 IPR013655 PAS fold-3 JHS88_20175 IPR035919 EAL domain superfamily JHS88_20175 IPR000160 GGDEF domain JHS88_20180 IPR011055 Duplicated hybrid motif JHS88_20180 IPR018392 LysM domain JHS88_20180 IPR013731 Opacity-associated protein A, N-terminal JHS88_20180 IPR016047 Peptidase M23 JHS88_20200 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain JHS88_20205 IPR029151 Periplasmic sensor-like domain superfamily JHS88_20205 IPR004090 Chemotaxis methyl-accepting receptor JHS88_20205 IPR033479 Double Cache domain 1 JHS88_20205 IPR003660 HAMP domain JHS88_20205 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JHS88_20205 IPR000727 Target SNARE coiled-coil homology domain JHS88_20215 IPR018227 Amino acid/polyamine transporter 2 JHS88_20215 IPR013059 Tryptophan/tyrosine transporter JHS88_20235 IPR003141 Polymerase/histidinol phosphatase, N-terminal JHS88_20235 IPR016195 Polymerase/histidinol phosphatase-like JHS88_20235 IPR023710 Probable phosphatase YcdX JHS88_20240 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_20250 IPR011032 GroES-like superfamily JHS88_20250 IPR013149 Alcohol dehydrogenase, C-terminal JHS88_20250 IPR013154 Alcohol dehydrogenase, N-terminal JHS88_20250 IPR036291 NAD(P)-binding domain superfamily JHS88_20255 IPR013011 Phosphotransferase system, EIIB component, type 2 JHS88_20255 IPR036095 PTS system IIB component-like superfamily JHS88_20255 IPR013014 Phosphotransferase system, EIIC component, type 2 JHS88_20255 IPR003352 Phosphotransferase system, EIIC JHS88_20255 IPR003501 Phosphotransferase system, EIIB component, type 2/3 JHS88_20255 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC JHS88_20255 IPR029503 Phosphotransferase system EIIB component, mannitol-specific JHS88_20260 IPR002178 PTS EIIA type-2 domain JHS88_20260 IPR016152 Phosphotransferase/anion transporter JHS88_20275 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 JHS88_20275 IPR038770 Sodium/solute symporter superfamily JHS88_20275 IPR004706 Arsenical-resistance protein Acr3 JHS88_20285 IPR008914 Phosphatidylethanolamine-binding protein JHS88_20285 IPR036610 PEBP-like superfamily JHS88_20285 IPR005247 YbhB/YbcL JHS88_20290 IPR003719 Phenazine biosynthesis PhzF protein JHS88_20295 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily JHS88_20295 IPR019405 Lactonase, 7-bladed beta propeller JHS88_20295 IPR015943 WD40/YVTN repeat-like-containing domain superfamily JHS88_20300 IPR004090 Chemotaxis methyl-accepting receptor JHS88_20300 IPR003660 HAMP domain JHS88_20300 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JHS88_20300 IPR033480 Single Cache domain 2 JHS88_20310 IPR003593 AAA+ ATPase domain JHS88_20310 IPR003439 ABC transporter-like JHS88_20310 IPR017871 ABC transporter, conserved site JHS88_20310 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_20315 IPR000412 ABC-2 transporter JHS88_20350 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JHS88_20350 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA JHS88_20350 IPR001036 Acriflavin resistance protein JHS88_20365 IPR012338 Beta-lactamase/transpeptidase-like JHS88_20365 IPR023650 Beta-lactamase, class-A active site JHS88_20365 IPR000871 Beta-lactamase, class-A JHS88_20370 IPR029787 Nucleotide cyclase JHS88_20370 IPR000160 GGDEF domain JHS88_20380 IPR000182 GNAT domain JHS88_20380 IPR016181 Acyl-CoA N-acyltransferase JHS88_20390 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) JHS88_20390 IPR042117 OMPP1/FadL/TodX superfamily JHS88_20395 IPR001036 Acriflavin resistance protein JHS88_20395 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 JHS88_20395 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JHS88_20400 IPR039562 Membrane fusion protein, biotin-lipoyl like domain JHS88_20400 IPR022824 Multidrug resistance protein MdtA JHS88_20400 IPR006143 RND efflux pump, membrane fusion protein JHS88_20410 IPR002470 Peptidase S9A, prolyl oligopeptidase JHS88_20410 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain JHS88_20410 IPR023302 Peptidase S9A, N-terminal domain JHS88_20410 IPR002471 Peptidase S9, serine active site JHS88_20410 IPR029058 Alpha/Beta hydrolase fold JHS88_20415 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_20415 IPR017871 ABC transporter, conserved site JHS88_20415 IPR032781 ABC-transporter extension domain JHS88_20415 IPR003593 AAA+ ATPase domain JHS88_20415 IPR003439 ABC transporter-like JHS88_20420 IPR006016 UspA JHS88_20420 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JHS88_20420 IPR006015 Universal stress protein A family JHS88_20425 IPR003680 Flavodoxin-like fold JHS88_20425 IPR029039 Flavoprotein-like superfamily JHS88_20430 IPR006153 Cation/H+ exchanger JHS88_20430 IPR004771 K+/H+ exchanger JHS88_20430 IPR023941 Glutathione-regulated potassium-efflux system protein KefC JHS88_20430 IPR006036 Potassium uptake protein TrkA JHS88_20430 IPR038770 Sodium/solute symporter superfamily JHS88_20430 IPR036291 NAD(P)-binding domain superfamily JHS88_20430 IPR003148 Regulator of K+ conductance, N-terminal JHS88_20445 IPR017853 Glycoside hydrolase superfamily JHS88_20445 IPR006047 Glycosyl hydrolase, family 13, catalytic domain JHS88_20445 IPR006046 Alpha amylase JHS88_20455 IPR013661 Peptidase M9, collagenase, N-terminal domain JHS88_20455 IPR002169 Peptidase M9A/M9B, collagenase, bacterial JHS88_20455 IPR007280 Peptidase, C-terminal, archaeal/bacterial JHS88_20470 IPR000847 Transcription regulator HTH, LysR JHS88_20470 IPR005119 LysR, substrate-binding JHS88_20470 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_20470 IPR036390 Winged helix DNA-binding domain superfamily JHS88_20475 IPR002177 DNA-binding protein Dps JHS88_20475 IPR023188 DNA-binding protein Dps, conserved site JHS88_20475 IPR012347 Ferritin-like JHS88_20475 IPR009078 Ferritin-like superfamily JHS88_20475 IPR008331 Ferritin/DPS protein domain JHS88_20480 IPR019794 Peroxidase, active site JHS88_20480 IPR010255 Haem peroxidase superfamily JHS88_20480 IPR002016 Haem peroxidase JHS88_20480 IPR000763 Catalase-peroxidase haem JHS88_20505 IPR041679 DNA2/NAM7 helicase-like, AAA domain JHS88_20505 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_20505 IPR025202 Phospholipase D-like domain JHS88_20505 IPR001736 Phospholipase D/Transphosphatidylase JHS88_20515 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site JHS88_20515 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type JHS88_20520 IPR024181 Chemotaxis response regulator CheV JHS88_20520 IPR036061 CheW-like domain superfamily JHS88_20520 IPR002545 CheW-like domain JHS88_20520 IPR011006 CheY-like superfamily JHS88_20520 IPR001789 Signal transduction response regulator, receiver domain JHS88_20530 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative JHS88_20530 IPR014419 Heme utilization protein HutZ JHS88_20530 IPR012349 FMN-binding split barrel JHS88_20535 IPR010413 Intracellular heme transport protein HutX-like JHS88_20540 IPR034505 Anaerobic coproporphyrinogen-III oxidase JHS88_20540 IPR006638 Elp3/MiaB/NifB JHS88_20540 IPR026332 Anaerobilin synthase HutW JHS88_20540 IPR007197 Radical SAM JHS88_20540 IPR023404 Radical SAM, alpha/beta horseshoe JHS88_20545 IPR006260 TonB/TolA, C-terminal JHS88_20545 IPR037682 TonB, C-terminal JHS88_20545 IPR003538 Gram-negative bacterial TonB protein JHS88_20550 IPR002898 MotA/TolQ/ExbB proton channel JHS88_20555 IPR003400 Biopolymer transport protein ExbD/TolR JHS88_20565 IPR000522 ABC transporter, permease protein, BtuC-like JHS88_20565 IPR037294 ABC transporter, BtuC-like JHS88_20570 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_20570 IPR015863 ABC transporter, hemin import, HmuV JHS88_20570 IPR003439 ABC transporter-like JHS88_20570 IPR003593 AAA+ ATPase domain JHS88_20610 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JHS88_20610 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase JHS88_20610 IPR004821 Cytidyltransferase-like domain JHS88_20615 IPR003694 NAD(+) synthetase JHS88_20615 IPR022926 NH(3)-dependent NAD(+) synthetase JHS88_20615 IPR022310 NAD/GMP synthase JHS88_20615 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JHS88_20620 IPR005302 Molybdenum cofactor sulfurase, C-terminal JHS88_20620 IPR011037 Pyruvate kinase-like, insert domain superfamily JHS88_20620 IPR005303 MOSC, N-terminal beta barrel JHS88_20620 IPR012675 Beta-grasp domain superfamily JHS88_20620 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain JHS88_20620 IPR005302 Molybdenum cofactor sulfurase, C-terminal JHS88_20620 IPR036010 2Fe-2S ferredoxin-like superfamily JHS88_20620 IPR011037 Pyruvate kinase-like, insert domain superfamily JHS88_20620 IPR036010 2Fe-2S ferredoxin-like superfamily JHS88_20620 IPR005303 MOSC, N-terminal beta barrel JHS88_20620 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site JHS88_20620 IPR012675 Beta-grasp domain superfamily JHS88_20620 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site JHS88_20620 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain JHS88_20625 IPR000612 Proteolipid membrane potential modulator JHS88_20630 IPR032466 Metal-dependent hydrolase JHS88_20630 IPR004721 Dihydroorotase homodimeric type JHS88_20630 IPR002195 Dihydroorotase, conserved site JHS88_20630 IPR006680 Amidohydrolase-related JHS88_20635 IPR008526 Inner membrane protein YedI JHS88_20665 IPR018060 DNA binding HTH domain, AraC-type JHS88_20665 IPR020449 Transcription regulator HTH, AraC- type JHS88_20665 IPR009057 Homeobox-like domain superfamily JHS88_20665 IPR018062 HTH domain AraC-type, conserved site JHS88_20665 IPR002491 ABC transporter periplasmic binding domain JHS88_20670 IPR004839 Aminotransferase, class I/classII JHS88_20670 IPR015424 Pyridoxal phosphate-dependent transferase JHS88_20670 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JHS88_20670 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JHS88_20695 IPR001173 Glycosyltransferase 2-like JHS88_20695 IPR029044 Nucleotide-diphospho-sugar transferases JHS88_20695 IPR026463 Chitooligosaccharide synthase NodC JHS88_20710 IPR014014 RNA helicase, DEAD-box type, Q motif JHS88_20710 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site JHS88_20710 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_20710 IPR028622 ATP-dependent RNA helicase RhlE JHS88_20710 IPR014001 Helicase superfamily 1/2, ATP-binding domain JHS88_20710 IPR011545 DEAD/DEAH box helicase domain JHS88_20710 IPR001650 Helicase, C-terminal JHS88_20720 IPR005119 LysR, substrate-binding JHS88_20720 IPR036390 Winged helix DNA-binding domain superfamily JHS88_20720 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_20720 IPR000847 Transcription regulator HTH, LysR JHS88_20725 IPR000847 Transcription regulator HTH, LysR JHS88_20725 IPR005119 LysR, substrate-binding JHS88_20725 IPR036390 Winged helix DNA-binding domain superfamily JHS88_20725 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_20735 IPR013785 Aldolase-type TIM barrel JHS88_20735 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal JHS88_20740 IPR013149 Alcohol dehydrogenase, C-terminal JHS88_20740 IPR013154 Alcohol dehydrogenase, N-terminal JHS88_20740 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site JHS88_20740 IPR011032 GroES-like superfamily JHS88_20740 IPR004627 L-threonine 3-dehydrogenase JHS88_20740 IPR036291 NAD(P)-binding domain superfamily JHS88_20740 IPR020843 Polyketide synthase, enoylreductase domain JHS88_20750 IPR020904 Short-chain dehydrogenase/reductase, conserved site JHS88_20750 IPR002347 Short-chain dehydrogenase/reductase SDR JHS88_20750 IPR036291 NAD(P)-binding domain superfamily JHS88_20750 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase JHS88_20755 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal JHS88_20755 IPR009057 Homeobox-like domain superfamily JHS88_20755 IPR020449 Transcription regulator HTH, AraC- type JHS88_20755 IPR018060 DNA binding HTH domain, AraC-type JHS88_20760 IPR018636 Protein of unknown function DUF2058 JHS88_20775 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_20775 IPR000847 Transcription regulator HTH, LysR JHS88_20775 IPR036390 Winged helix DNA-binding domain superfamily JHS88_20775 IPR005119 LysR, substrate-binding JHS88_20780 IPR001114 Adenylosuccinate synthetase JHS88_20780 IPR042111 Adenylosuccinate synthetase, domain 3 JHS88_20780 IPR042110 Adenylosuccinate synthetase, domain 2 JHS88_20780 IPR042109 Adenylosuccinate synthetase, domain 1 JHS88_20780 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_20785 IPR027474 L-asparaginase, N-terminal JHS88_20785 IPR027473 L-asparaginase, C-terminal JHS88_20785 IPR037152 L-asparaginase, N-terminal domain superfamily JHS88_20785 IPR006034 Asparaginase/glutaminase-like JHS88_20785 IPR004550 L-asparaginase, type II JHS88_20785 IPR036152 Asparaginase/glutaminase-like superfamily JHS88_20785 IPR040919 Asparaginase/glutaminase, C-terminal JHS88_20785 IPR027475 Asparaginase/glutaminase, active site 2 JHS88_20785 IPR020827 Asparaginase/glutaminase, active site 1 JHS88_20790 IPR005177 Bifunctional kinase-pyrophosphorylase JHS88_20790 IPR026530 Phosphoenolpyruvate synthase regulatory protein JHS88_20795 IPR040442 Pyruvate kinase-like domain superfamily JHS88_20795 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily JHS88_20795 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding JHS88_20795 IPR036637 Phosphohistidine domain superfamily JHS88_20795 IPR013815 ATP-grasp fold, subdomain 1 JHS88_20795 IPR000121 PEP-utilising enzyme, C-terminal JHS88_20795 IPR018274 PEP-utilising enzyme, active site JHS88_20795 IPR006319 Phosphoenolpyruvate synthase JHS88_20795 IPR008279 PEP-utilising enzyme, mobile domain JHS88_20795 IPR023151 PEP-utilising enzyme, conserved site JHS88_20810 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 JHS88_20810 IPR024088 Tyrosine-tRNA ligase, bacterial-type JHS88_20810 IPR002307 Tyrosine-tRNA ligase JHS88_20810 IPR002942 RNA-binding S4 domain JHS88_20810 IPR002305 Aminoacyl-tRNA synthetase, class Ic JHS88_20810 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site JHS88_20810 IPR036986 RNA-binding S4 domain superfamily JHS88_20810 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JHS88_20815 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein JHS88_20815 IPR006059 Bacterial extracellular solute-binding protein JHS88_20825 IPR036390 Winged helix DNA-binding domain superfamily JHS88_20825 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_20825 IPR005119 LysR, substrate-binding JHS88_20825 IPR000847 Transcription regulator HTH, LysR JHS88_20830 IPR039562 Membrane fusion protein, biotin-lipoyl like domain JHS88_20835 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JHS88_20835 IPR001036 Acriflavin resistance protein JHS88_20835 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA JHS88_20850 IPR029787 Nucleotide cyclase JHS88_20850 IPR000160 GGDEF domain JHS88_20850 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region JHS88_20860 IPR016032 Signal transduction response regulator, C-terminal effector JHS88_20860 IPR000792 Transcription regulator LuxR, C-terminal JHS88_20860 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_20865 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily JHS88_20865 IPR040605 Glycoside hydrolase family 2, domain 5 JHS88_20865 IPR008979 Galactose-binding-like domain superfamily JHS88_20865 IPR006101 Glycoside hydrolase, family 2 JHS88_20865 IPR023232 Glycoside hydrolase, family 2, active site JHS88_20865 IPR006103 Glycoside hydrolase family 2, catalytic domain JHS88_20865 IPR013783 Immunoglobulin-like fold JHS88_20865 IPR017853 Glycoside hydrolase superfamily JHS88_20865 IPR006104 Glycosyl hydrolases family 2, sugar binding domain JHS88_20865 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich JHS88_20865 IPR023230 Glycoside hydrolase, family 2, conserved site JHS88_20870 IPR000060 BCCT transporter family JHS88_20875 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily JHS88_20875 IPR036390 Winged helix DNA-binding domain superfamily JHS88_20875 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_20875 IPR011663 UbiC transcription regulator-associated JHS88_20875 IPR017722 Phosphonate utilization transcriptional regulator PhnR JHS88_20875 IPR000524 Transcription regulator HTH, GntR JHS88_20900 IPR017871 ABC transporter, conserved site JHS88_20900 IPR015853 ABC transporter, ferric cation import, FbpC JHS88_20900 IPR008995 Molybdate/tungstate binding, C-terminal JHS88_20900 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_20900 IPR013611 Transport-associated OB, type 2 JHS88_20900 IPR003593 AAA+ ATPase domain JHS88_20900 IPR003439 ABC transporter-like JHS88_20930 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains JHS88_20930 IPR001036 Acriflavin resistance protein JHS88_20935 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA JHS88_20935 IPR006143 RND efflux pump, membrane fusion protein JHS88_20935 IPR039562 Membrane fusion protein, biotin-lipoyl like domain JHS88_20940 IPR001736 Phospholipase D/Transphosphatidylase JHS88_20940 IPR025202 Phospholipase D-like domain JHS88_20940 IPR030871 Cardiolipin synthase C JHS88_20965 IPR009061 Putative DNA-binding domain superfamily JHS88_20965 IPR010211 Redox-sensitive transcriptional activator SoxR JHS88_20965 IPR015358 Transcription regulator MerR, DNA binding JHS88_20965 IPR000551 MerR-type HTH domain JHS88_20975 IPR000847 Transcription regulator HTH, LysR JHS88_20975 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_20975 IPR005119 LysR, substrate-binding JHS88_20975 IPR037414 Transcriptional activator protein LysR, PBP2 domain JHS88_20975 IPR036390 Winged helix DNA-binding domain superfamily JHS88_20985 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain JHS88_20985 IPR029017 Enolase-like, N-terminal JHS88_20985 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site JHS88_20985 IPR029065 Enolase C-terminal domain-like JHS88_20985 IPR036849 Enolase-like, C-terminal domain superfamily JHS88_20985 IPR034603 Dipeptide epimerase JHS88_20985 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal JHS88_20990 IPR000795 Transcription factor, GTP-binding domain JHS88_20990 IPR005517 Translation elongation factor EFG/EF2, domain IV JHS88_20990 IPR004540 Translation elongation factor EFG/EF2 JHS88_20990 IPR009000 Translation protein, beta-barrel domain superfamily JHS88_20990 IPR005225 Small GTP-binding protein domain JHS88_20990 IPR035647 EF-G domain III/V-like JHS88_20990 IPR020568 Ribosomal protein S5 domain 2-type fold JHS88_20990 IPR000640 Elongation factor EFG, domain V-like JHS88_20990 IPR035649 EFG, domain V JHS88_20990 IPR009022 Elongation factor G, domain III JHS88_20990 IPR004161 Translation elongation factor EFTu-like, domain 2 JHS88_20990 IPR031157 Tr-type G domain, conserved site JHS88_20990 IPR041095 Elongation Factor G, domain II JHS88_20990 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup JHS88_20990 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_21015 IPR013324 RNA polymerase sigma factor, region 3/4-like JHS88_21015 IPR002852 Uncharacterised protein family UPF0251 JHS88_21015 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_21020 IPR007298 Copper resistance lipoprotein NlpE JHS88_21020 IPR033450 NlpE, C-terminal OB domain JHS88_21020 IPR038139 NlpE, C-terminal domain superfamily JHS88_21025 IPR010583 MltA-interacting MipA JHS88_21035 IPR006690 Outer membrane protein, OmpA-like, conserved site JHS88_21035 IPR036737 OmpA-like domain superfamily JHS88_21035 IPR002368 Outer membrane protein, OmpA JHS88_21035 IPR006665 OmpA-like domain JHS88_21035 IPR006664 Outer membrane protein, bacterial JHS88_21035 IPR000498 Outer membrane protein OmpA-like, transmembrane domain JHS88_21035 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel JHS88_21040 IPR005119 LysR, substrate-binding JHS88_21040 IPR000847 Transcription regulator HTH, LysR JHS88_21040 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_21040 IPR036390 Winged helix DNA-binding domain superfamily JHS88_21065 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase JHS88_21065 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain JHS88_21065 IPR006406 Nicotinate phosphoribosyltransferase JHS88_21065 IPR007229 Nicotinate phosphoribosyltransferase family JHS88_21065 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal JHS88_21075 IPR000868 Isochorismatase-like JHS88_21075 IPR036380 Isochorismatase-like superfamily JHS88_21085 IPR011614 Catalase core domain JHS88_21085 IPR020835 Catalase superfamily JHS88_21085 IPR010582 Catalase immune-responsive domain JHS88_21085 IPR002226 Catalase haem-binding site JHS88_21085 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 JHS88_21085 IPR024708 Catalase active site JHS88_21085 IPR018028 Catalase, mono-functional, haem-containing JHS88_21085 IPR037060 Catalase core domain superfamily JHS88_21095 IPR014036 DeoR C-terminal sensor domain JHS88_21095 IPR001034 DeoR-type HTH domain JHS88_21095 IPR037171 NagB/RpiA transferase-like JHS88_21095 IPR018356 Transcription regulator, HTH DeoR-type, conserved site JHS88_21095 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_21095 IPR036390 Winged helix DNA-binding domain superfamily JHS88_21100 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JHS88_21100 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JHS88_21100 IPR037523 Vicinal oxygen chelate (VOC) domain JHS88_21105 IPR011057 Mss4-like superfamily JHS88_21105 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily JHS88_21105 IPR002579 Peptide methionine sulphoxide reductase MrsB JHS88_21105 IPR028427 Peptide methionine sulfoxide reductase JHS88_21105 IPR002569 Peptide methionine sulphoxide reductase MsrA JHS88_21120 IPR025668 Transposase DDE domain JHS88_21130 IPR005887 Alpha-1,2-mannosidase, putative JHS88_21130 IPR014718 Glycoside hydrolase-type carbohydrate-binding JHS88_21130 IPR041371 Glycosyl hydrolase family 92 N-terminal domain JHS88_21130 IPR012939 Glycosyl hydrolase family 92 JHS88_21130 IPR008928 Six-hairpin glycosidase superfamily JHS88_21135 IPR008928 Six-hairpin glycosidase superfamily JHS88_21135 IPR005887 Alpha-1,2-mannosidase, putative JHS88_21135 IPR014718 Glycoside hydrolase-type carbohydrate-binding JHS88_21135 IPR041371 Glycosyl hydrolase family 92 N-terminal domain JHS88_21135 IPR012939 Glycosyl hydrolase family 92 JHS88_21145 IPR012939 Glycosyl hydrolase family 92 JHS88_21145 IPR041371 Glycosyl hydrolase family 92 N-terminal domain JHS88_21145 IPR005887 Alpha-1,2-mannosidase, putative JHS88_21145 IPR008928 Six-hairpin glycosidase superfamily JHS88_21145 IPR014718 Glycoside hydrolase-type carbohydrate-binding JHS88_21150 IPR008928 Six-hairpin glycosidase superfamily JHS88_21150 IPR005887 Alpha-1,2-mannosidase, putative JHS88_21150 IPR014718 Glycoside hydrolase-type carbohydrate-binding JHS88_21150 IPR041371 Glycosyl hydrolase family 92 N-terminal domain JHS88_21150 IPR012939 Glycosyl hydrolase family 92 JHS88_21155 IPR013785 Aldolase-type TIM barrel JHS88_21155 IPR004136 Nitronate monooxygenase JHS88_21160 IPR029052 Metallo-dependent phosphatase-like JHS88_21160 IPR019931 LPXTG cell wall anchor domain JHS88_21160 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type JHS88_21160 IPR041827 CpdB, N-terminal metallophosphatase domain JHS88_21160 IPR006146 5'-Nucleotidase, conserved site JHS88_21160 IPR008334 5'-Nucleotidase, C-terminal JHS88_21160 IPR006179 5'-Nucleotidase/apyrase JHS88_21160 IPR036907 5'-Nucleotidase, C-terminal domain superfamily JHS88_21170 IPR009057 Homeobox-like domain superfamily JHS88_21170 IPR001647 DNA-binding HTH domain, TetR-type JHS88_21170 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily JHS88_21170 IPR013570 Transcription regulator YsiA, C-terminal JHS88_21185 IPR036390 Winged helix DNA-binding domain superfamily JHS88_21185 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_21185 IPR000847 Transcription regulator HTH, LysR JHS88_21185 IPR005119 LysR, substrate-binding JHS88_21185 IPR037418 HTH-type transcriptional regulator TrpI, PBP2 JHS88_21190 IPR001123 Amino acid exporter protein, LeuE-type JHS88_21190 IPR004778 Homoserine/Threonine efflux protein JHS88_21205 IPR002423 Chaperonin Cpn60/TCP-1 family JHS88_21205 IPR001844 Chaperonin Cpn60 JHS88_21205 IPR018370 Chaperonin Cpn60, conserved site JHS88_21205 IPR027410 TCP-1-like chaperonin intermediate domain superfamily JHS88_21205 IPR027409 GroEL-like apical domain superfamily JHS88_21205 IPR027413 GroEL-like equatorial domain superfamily JHS88_21210 IPR020818 GroES chaperonin family JHS88_21210 IPR037124 GroES chaperonin superfamily JHS88_21210 IPR018369 Chaperonin GroES, conserved site JHS88_21210 IPR011032 GroES-like superfamily JHS88_21215 IPR001763 Rhodanese-like domain JHS88_21215 IPR036873 Rhodanese-like domain superfamily JHS88_21215 IPR023695 Thiosulfate sulfurtransferase, bacterial JHS88_21240 IPR013785 Aldolase-type TIM barrel JHS88_21240 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent JHS88_21240 IPR000262 FMN-dependent dehydrogenase JHS88_21260 IPR013384 Flagellar hook-associated protein 3 JHS88_21260 IPR001029 Flagellin, D0/D1 domain JHS88_21270 IPR019301 Flagellar protein FlgJ, N-terminal JHS88_21270 IPR023346 Lysozyme-like domain superfamily JHS88_21270 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain JHS88_21270 IPR013377 Peptidoglycan hydrolase FlgJ JHS88_21275 IPR001782 Flagellar P-ring protein JHS88_21280 IPR000527 Flagellar L-ring protein JHS88_21285 IPR001444 Flagellar basal body rod protein, N-terminal JHS88_21285 IPR019776 Flagellar basal body rod protein, conserved site JHS88_21285 IPR020013 Flagellar hook-basal body protein, FlgE/F/G JHS88_21285 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like JHS88_21285 IPR012834 Flagellar basal-body rod FlgG JHS88_21285 IPR010930 Flagellar basal-body/hook protein, C-terminal domain JHS88_21290 IPR010930 Flagellar basal-body/hook protein, C-terminal domain JHS88_21290 IPR020013 Flagellar hook-basal body protein, FlgE/F/G JHS88_21290 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like JHS88_21290 IPR019776 Flagellar basal body rod protein, conserved site JHS88_21290 IPR001444 Flagellar basal body rod protein, N-terminal JHS88_21295 IPR001444 Flagellar basal body rod protein, N-terminal JHS88_21295 IPR011491 Flagellar hook protein FlgE JHS88_21295 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like JHS88_21295 IPR037058 Flagellar hook protein FlgE superfamily JHS88_21295 IPR010930 Flagellar basal-body/hook protein, C-terminal domain JHS88_21295 IPR019776 Flagellar basal body rod protein, conserved site JHS88_21295 IPR020013 Flagellar hook-basal body protein, FlgE/F/G JHS88_21300 IPR005648 Flagellar hook capping protein JHS88_21300 IPR025965 FlgD Ig-like domain JHS88_21300 IPR025963 FlgD Tudor-like domain JHS88_21305 IPR001444 Flagellar basal body rod protein, N-terminal JHS88_21305 IPR019776 Flagellar basal body rod protein, conserved site JHS88_21305 IPR010930 Flagellar basal-body/hook protein, C-terminal domain JHS88_21305 IPR006299 Flagellar basal-body rod protein FlgC JHS88_21310 IPR001444 Flagellar basal body rod protein, N-terminal JHS88_21310 IPR019776 Flagellar basal body rod protein, conserved site JHS88_21310 IPR006300 Flagellar basal-body rod protein FlgB JHS88_21330 IPR000189 Prokaryotic transglycosylase, active site JHS88_21330 IPR023346 Lysozyme-like domain superfamily JHS88_21330 IPR008258 Transglycosylase SLT domain 1 JHS88_21335 IPR023586 Isoleucine-tRNA ligase, type 2 JHS88_21335 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding JHS88_21335 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain JHS88_21335 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JHS88_21335 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site JHS88_21335 IPR002300 Aminoacyl-tRNA synthetase, class Ia JHS88_21335 IPR033709 Isoleucyl tRNA synthetase type 2, anticodon-binding domain JHS88_21335 IPR002301 Isoleucine-tRNA ligase JHS88_21335 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding JHS88_21355 IPR005130 Serine dehydratase-like, alpha subunit JHS88_21355 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form JHS88_21355 IPR029009 Allosteric substrate binding domain superfamily JHS88_21355 IPR005131 Serine dehydratase beta chain JHS88_21360 IPR000109 Proton-dependent oligopeptide transporter family JHS88_21360 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site JHS88_21360 IPR005279 Dipeptide/tripeptide permease JHS88_21360 IPR020846 Major facilitator superfamily domain JHS88_21360 IPR036259 MFS transporter superfamily JHS88_21370 IPR005119 LysR, substrate-binding JHS88_21370 IPR000847 Transcription regulator HTH, LysR JHS88_21370 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_21370 IPR036390 Winged helix DNA-binding domain superfamily JHS88_21380 IPR036390 Winged helix DNA-binding domain superfamily JHS88_21380 IPR005119 LysR, substrate-binding JHS88_21380 IPR000847 Transcription regulator HTH, LysR JHS88_21380 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_21385 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel JHS88_21385 IPR006690 Outer membrane protein, OmpA-like, conserved site JHS88_21385 IPR006665 OmpA-like domain JHS88_21385 IPR002368 Outer membrane protein, OmpA JHS88_21385 IPR006664 Outer membrane protein, bacterial JHS88_21385 IPR000498 Outer membrane protein OmpA-like, transmembrane domain JHS88_21385 IPR036737 OmpA-like domain superfamily JHS88_21390 IPR000834 Peptidase M14, carboxypeptidase A JHS88_21390 IPR040626 Cytosolic carboxypeptidase, N-terminal JHS88_21395 IPR036188 FAD/NAD(P)-binding domain superfamily JHS88_21395 IPR006076 FAD dependent oxidoreductase JHS88_21400 IPR007488 Protein of unknown function DUF535 JHS88_21415 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily JHS88_21415 IPR000524 Transcription regulator HTH, GntR JHS88_21415 IPR017722 Phosphonate utilization transcriptional regulator PhnR JHS88_21415 IPR011663 UbiC transcription regulator-associated JHS88_21415 IPR036390 Winged helix DNA-binding domain superfamily JHS88_21415 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_21420 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JHS88_21420 IPR035906 MetI-like superfamily JHS88_21425 IPR003593 AAA+ ATPase domain JHS88_21425 IPR003439 ABC transporter-like JHS88_21425 IPR017871 ABC transporter, conserved site JHS88_21425 IPR015853 ABC transporter, ferric cation import, FbpC JHS88_21425 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 JHS88_21425 IPR008995 Molybdate/tungstate binding, C-terminal JHS88_21425 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_21435 IPR026045 Ferric binding protein JHS88_21440 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JHS88_21440 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase JHS88_21440 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JHS88_21440 IPR015424 Pyridoxal phosphate-dependent transferase JHS88_21440 IPR012703 2-aminoethylphosphonate--pyruvate transaminase JHS88_21440 IPR000192 Aminotransferase class V domain JHS88_21445 IPR005814 Aminotransferase class-III JHS88_21445 IPR015424 Pyridoxal phosphate-dependent transferase JHS88_21445 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JHS88_21445 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JHS88_21450 IPR036412 HAD-like superfamily JHS88_21450 IPR006439 HAD hydrolase, subfamily IA JHS88_21450 IPR041492 Haloacid dehalogenase-like hydrolase JHS88_21450 IPR023214 HAD superfamily JHS88_21450 IPR023198 Phosphoglycolate phosphatase-like, domain 2 JHS88_21450 IPR006323 Phosphonoacetaldehyde hydrolase JHS88_21455 IPR000843 LacI-type HTH domain JHS88_21455 IPR010982 Lambda repressor-like, DNA-binding domain superfamily JHS88_21455 IPR028082 Periplasmic binding protein-like I JHS88_21460 IPR016152 Phosphotransferase/anion transporter JHS88_21460 IPR002178 PTS EIIA type-2 domain JHS88_21470 IPR004703 Phosphotransferase system, sugar-specific permease component JHS88_21480 IPR015500 Peptidase S8, subtilisin-related JHS88_21480 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily JHS88_21480 IPR034202 Subtilisin Carlsberg-like catalytic domain JHS88_21480 IPR023828 Peptidase S8, subtilisin, Ser-active site JHS88_21480 IPR022398 Peptidase S8, subtilisin, His-active site JHS88_21480 IPR023827 Peptidase S8, subtilisin, Asp-active site JHS88_21480 IPR036852 Peptidase S8/S53 domain superfamily JHS88_21480 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 JHS88_21480 IPR000209 Peptidase S8/S53 domain JHS88_21485 IPR001087 GDSL lipase/esterase JHS88_21485 IPR008265 Lipase, GDSL, active site JHS88_21485 IPR036514 SGNH hydrolase superfamily JHS88_21490 IPR003423 Outer membrane efflux protein JHS88_21490 IPR010131 RND efflux system, outer membrane lipoprotein, NodT JHS88_21495 IPR003439 ABC transporter-like JHS88_21495 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_21495 IPR025857 MacB-like periplasmic core domain JHS88_21495 IPR017911 ABC transporter, macrolide export, ATP-binding domain JHS88_21495 IPR017871 ABC transporter, conserved site JHS88_21495 IPR003838 ABC transporter permease protein domain JHS88_21495 IPR003593 AAA+ ATPase domain JHS88_21500 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain JHS88_21500 IPR030190 Macrolide export protein MacA JHS88_21500 IPR006143 RND efflux pump, membrane fusion protein JHS88_21505 IPR042117 OMPP1/FadL/TodX superfamily JHS88_21505 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) JHS88_21510 IPR023561 Carbonic anhydrase, alpha-class JHS88_21510 IPR036398 Alpha carbonic anhydrase domain superfamily JHS88_21510 IPR018338 Carbonic anhydrase, alpha-class, conserved site JHS88_21510 IPR041891 Carbonic anhydrase, prokaryotic-like JHS88_21510 IPR001148 Alpha carbonic anhydrase domain JHS88_21515 IPR006513 Conserved hypothetical protein CHP01626, YtfJ JHS88_21530 IPR036412 HAD-like superfamily JHS88_21530 IPR023198 Phosphoglycolate phosphatase-like, domain 2 JHS88_21530 IPR023214 HAD superfamily JHS88_21530 IPR041492 Haloacid dehalogenase-like hydrolase JHS88_21530 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB JHS88_21530 IPR006439 HAD hydrolase, subfamily IA JHS88_21535 IPR036390 Winged helix DNA-binding domain superfamily JHS88_21535 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_21535 IPR000847 Transcription regulator HTH, LysR JHS88_21535 IPR005119 LysR, substrate-binding JHS88_21570 IPR011004 Trimeric LpxA-like superfamily JHS88_21570 IPR024688 Maltose/galactoside acetyltransferase JHS88_21570 IPR018357 Hexapeptide transferase, conserved site JHS88_21570 IPR001451 Hexapeptide repeat JHS88_21575 IPR015946 K homology domain-like, alpha/beta JHS88_21575 IPR036102 OsmC/Ohr superfamily JHS88_21575 IPR003718 OsmC/Ohr family JHS88_21580 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily JHS88_21580 IPR028427 Peptide methionine sulfoxide reductase JHS88_21580 IPR002569 Peptide methionine sulphoxide reductase MsrA JHS88_21580 IPR011057 Mss4-like superfamily JHS88_21580 IPR002579 Peptide methionine sulphoxide reductase MrsB JHS88_21595 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JHS88_21595 IPR007357 Deoxyribodipyrimidine photolyase-related protein JHS88_21595 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily JHS88_21600 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold JHS88_21600 IPR006050 DNA photolyase, N-terminal JHS88_21600 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily JHS88_21600 IPR002081 Cryptochrome/DNA photolyase class 1 JHS88_21600 IPR014133 Cryptochrome DASH JHS88_21600 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily JHS88_21600 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain JHS88_21605 IPR029787 Nucleotide cyclase JHS88_21605 IPR000160 GGDEF domain JHS88_21620 IPR003660 HAMP domain JHS88_21620 IPR000727 Target SNARE coiled-coil homology domain JHS88_21620 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JHS88_21620 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain JHS88_21620 IPR004090 Chemotaxis methyl-accepting receptor JHS88_21625 IPR000160 GGDEF domain JHS88_21625 IPR029787 Nucleotide cyclase JHS88_21625 IPR007894 MASE2 JHS88_21630 IPR005123 Oxoglutarate/iron-dependent dioxygenase JHS88_21630 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily JHS88_21630 IPR004574 Alkylated DNA repair protein AlkB JHS88_21630 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like JHS88_21640 IPR011657 Concentrative nucleoside transporter C-terminal domain JHS88_21640 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial JHS88_21640 IPR008276 Concentrative nucleoside transporter JHS88_21640 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain JHS88_21640 IPR002668 Concentrative nucleoside transporter N-terminal domain JHS88_21655 IPR011166 Beta-eliminating lyase family JHS88_21655 IPR015424 Pyridoxal phosphate-dependent transferase JHS88_21655 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JHS88_21655 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JHS88_21655 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase JHS88_21655 IPR013440 Tryptophanase JHS88_21655 IPR018176 Tryptophanase, conserved site JHS88_21665 IPR030862 L-2-hydroxyglutarate dehydrogenase JHS88_21665 IPR036188 FAD/NAD(P)-binding domain superfamily JHS88_21665 IPR006076 FAD dependent oxidoreductase JHS88_21680 IPR004685 Branched-chain amino acid transport system II carrier protein JHS88_21685 IPR029787 Nucleotide cyclase JHS88_21685 IPR035965 PAS domain superfamily JHS88_21685 IPR000700 PAS-associated, C-terminal JHS88_21685 IPR000160 GGDEF domain JHS88_21685 IPR013656 PAS fold-4 JHS88_21685 IPR000014 PAS domain JHS88_21690 IPR025944 Sigma-54 interaction domain, conserved site JHS88_21690 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JHS88_21690 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 JHS88_21690 IPR002078 RNA polymerase sigma factor 54 interaction domain JHS88_21690 IPR001789 Signal transduction response regulator, receiver domain JHS88_21690 IPR002197 DNA binding HTH domain, Fis-type JHS88_21690 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_21690 IPR011006 CheY-like superfamily JHS88_21690 IPR003593 AAA+ ATPase domain JHS88_21690 IPR009057 Homeobox-like domain superfamily JHS88_21695 IPR005467 Histidine kinase domain JHS88_21695 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) JHS88_21695 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JHS88_21695 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JHS88_21695 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JHS88_21695 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_21695 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_21695 IPR033479 Double Cache domain 1 JHS88_21695 IPR029151 Periplasmic sensor-like domain superfamily JHS88_21700 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site JHS88_21700 IPR017853 Glycoside hydrolase superfamily JHS88_21700 IPR018120 Glycoside hydrolase family 1, active site JHS88_21700 IPR001360 Glycoside hydrolase family 1 JHS88_21725 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_21725 IPR036390 Winged helix DNA-binding domain superfamily JHS88_21725 IPR005119 LysR, substrate-binding JHS88_21725 IPR000847 Transcription regulator HTH, LysR JHS88_21730 IPR011761 ATP-grasp fold JHS88_21730 IPR013651 ATP-grasp fold, RimK-type JHS88_21730 IPR013815 ATP-grasp fold, subdomain 1 JHS88_21730 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK JHS88_21730 IPR041107 RimK, PreATP-grasp domain JHS88_21730 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX JHS88_21735 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK JHS88_21735 IPR021109 Aspartic peptidase domain superfamily JHS88_21735 IPR011761 ATP-grasp fold JHS88_21735 IPR013651 ATP-grasp fold, RimK-type JHS88_21735 IPR041107 RimK, PreATP-grasp domain JHS88_21735 IPR013815 ATP-grasp fold, subdomain 1 JHS88_21735 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX JHS88_21740 IPR001279 Metallo-beta-lactamase JHS88_21740 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JHS88_21740 IPR001018 Beta-lactamase, class-B, conserved site JHS88_21745 IPR040634 Arginine decarboxylase, helical bundle domain JHS88_21745 IPR029066 PLP-binding barrel JHS88_21745 IPR041128 Arginine decarboxylase, C-terminal helical JHS88_21745 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal JHS88_21745 IPR000183 Ornithine/DAP/Arg decarboxylase JHS88_21745 IPR002985 Arginine decarboxylase JHS88_21745 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal JHS88_21750 IPR023694 Agmatinase JHS88_21750 IPR005925 Agmatinase-related JHS88_21750 IPR006035 Ureohydrolase JHS88_21750 IPR020855 Ureohydrolase, manganese-binding site JHS88_21750 IPR023696 Ureohydrolase domain superfamily JHS88_21755 IPR036259 MFS transporter superfamily JHS88_21755 IPR011701 Major facilitator superfamily JHS88_21755 IPR004734 Multidrug resistance protein JHS88_21755 IPR020846 Major facilitator superfamily domain JHS88_21760 IPR002470 Peptidase S9A, prolyl oligopeptidase JHS88_21760 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain JHS88_21760 IPR023302 Peptidase S9A, N-terminal domain JHS88_21760 IPR002471 Peptidase S9, serine active site JHS88_21760 IPR029058 Alpha/Beta hydrolase fold JHS88_21775 IPR001626 ABC transporter, TroCD-like JHS88_21775 IPR037294 ABC transporter, BtuC-like JHS88_21780 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_21780 IPR017871 ABC transporter, conserved site JHS88_21780 IPR003439 ABC transporter-like JHS88_21780 IPR003593 AAA+ ATPase domain JHS88_21785 IPR006127 Periplasmic solute binding protein, ZnuA-like JHS88_21785 IPR006128 Adhesion lipoprotein JHS88_21785 IPR006129 Adhesin B JHS88_21825 IPR003400 Biopolymer transport protein ExbD/TolR JHS88_21830 IPR002898 MotA/TolQ/ExbB proton channel JHS88_21835 IPR002898 MotA/TolQ/ExbB proton channel JHS88_21845 IPR010105 TonB-dependent siderophore receptor JHS88_21845 IPR012910 TonB-dependent receptor, plug domain JHS88_21845 IPR037066 TonB-dependent receptor, plug domain superfamily JHS88_21845 IPR039423 TonB-dependent receptor-like JHS88_21845 IPR000531 TonB-dependent receptor-like, beta-barrel JHS88_21845 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily JHS88_21850 IPR003660 HAMP domain JHS88_21850 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_21850 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_21850 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JHS88_21850 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JHS88_21850 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JHS88_21850 IPR038428 2-component histidine kinase, sensor domain superfamily JHS88_21850 IPR031930 2-component histidine kinase, sensor domain JHS88_21850 IPR005467 Histidine kinase domain JHS88_21855 IPR039420 Transcriptional regulatory protein WalR-like JHS88_21855 IPR001789 Signal transduction response regulator, receiver domain JHS88_21855 IPR016032 Signal transduction response regulator, C-terminal effector JHS88_21855 IPR001867 OmpR/PhoB-type DNA-binding domain JHS88_21855 IPR011006 CheY-like superfamily JHS88_21855 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_21860 IPR001557 L-lactate/malate dehydrogenase JHS88_21860 IPR011304 L-lactate dehydrogenase JHS88_21860 IPR022383 Lactate/malate dehydrogenase, C-terminal JHS88_21860 IPR001236 Lactate/malate dehydrogenase, N-terminal JHS88_21860 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal JHS88_21860 IPR036291 NAD(P)-binding domain superfamily JHS88_21860 IPR018177 L-lactate dehydrogenase, active site JHS88_21865 IPR030395 Glycerophosphodiester phosphodiesterase domain JHS88_21865 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily JHS88_21875 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JHS88_21875 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site JHS88_21875 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 JHS88_21875 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain JHS88_21875 IPR036291 NAD(P)-binding domain superfamily JHS88_21880 IPR021230 Protein of unknown function DUF2810 JHS88_21930 IPR029028 Alpha/beta knot methyltransferases JHS88_21930 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY JHS88_21930 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal JHS88_21935 IPR036059 Metalloprotease TldD/PmbA superfamily JHS88_21935 IPR002510 Metalloprotease TldD/PmbA JHS88_21935 IPR035068 Metalloprotease TldD/PmbA, N-terminal JHS88_21935 IPR025502 TldD JHS88_21940 IPR002510 Metalloprotease TldD/PmbA JHS88_21940 IPR035068 Metalloprotease TldD/PmbA, N-terminal JHS88_21940 IPR036059 Metalloprotease TldD/PmbA superfamily JHS88_21945 IPR029056 Ribokinase-like JHS88_21945 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase JHS88_21945 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase JHS88_21950 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_21950 IPR017871 ABC transporter, conserved site JHS88_21950 IPR003593 AAA+ ATPase domain JHS88_21950 IPR003439 ABC transporter-like JHS88_21955 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JHS88_21955 IPR035906 MetI-like superfamily JHS88_21960 IPR027939 NMT1/THI5 family JHS88_21960 IPR015168 SsuA/THI5-like JHS88_21965 IPR016084 Haem oxygenase-like, multi-helical JHS88_21965 IPR004305 Thiaminase-2/PQQC JHS88_21965 IPR027574 Thiaminase II JHS88_21970 IPR000417 Hydroxyethylthiazole kinase JHS88_21970 IPR029056 Ribokinase-like JHS88_21975 IPR034291 Thiamine phosphate synthase JHS88_21975 IPR022998 Thiamine phosphate synthase/TenI JHS88_21975 IPR013785 Aldolase-type TIM barrel JHS88_21975 IPR036206 Thiamin phosphate synthase superfamily JHS88_21985 IPR006657 Molybdopterin dinucleotide-binding domain JHS88_21985 IPR006656 Molybdopterin oxidoreductase JHS88_21985 IPR041460 Molybdopterin oxidoreductase, N-terminal JHS88_21985 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site JHS88_21985 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase JHS88_21985 IPR009010 Aspartate decarboxylase-like domain superfamily JHS88_21985 IPR041954 Trimethylamine-N-oxide reductase-like, molybdopterin-binding domain JHS88_21985 IPR006311 Twin-arginine translocation pathway, signal sequence JHS88_21985 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal JHS88_21990 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK JHS88_21990 IPR011031 Multihaem cytochrome JHS88_21990 IPR036280 Multiheme cytochrome superfamily JHS88_21990 IPR005126 NapC/NirT cytochrome c, N-terminal JHS88_21990 IPR038266 NapC/NirT cytochrome c superfamily JHS88_22000 IPR036291 NAD(P)-binding domain superfamily JHS88_22000 IPR020904 Short-chain dehydrogenase/reductase, conserved site JHS88_22000 IPR002347 Short-chain dehydrogenase/reductase SDR JHS88_22015 IPR016181 Acyl-CoA N-acyltransferase JHS88_22015 IPR000182 GNAT domain JHS88_22015 IPR027455 Spermine/spermidine acetyltransferase, N-terminal JHS88_22035 IPR036390 Winged helix DNA-binding domain superfamily JHS88_22035 IPR000524 Transcription regulator HTH, GntR JHS88_22035 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JHS88_22035 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_22035 IPR004839 Aminotransferase, class I/classII JHS88_22035 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JHS88_22035 IPR015424 Pyridoxal phosphate-dependent transferase JHS88_22040 IPR018193 Glycerate kinase, flavodoxin-like fold JHS88_22040 IPR004381 Glycerate kinase JHS88_22040 IPR018197 Glycerate kinase, restriction-enzyme-like fold JHS88_22040 IPR036129 Glycerate kinase superfamily JHS88_22045 IPR003474 Gluconate transporter JHS88_22050 IPR025736 PucR C-terminal helix-turn-helix domain JHS88_22050 IPR042070 PucR C-terminal helix-turn-helix domain superfamily JHS88_22050 IPR008599 Putative sugar diacid recognition JHS88_22050 IPR041522 CdaR, GGDEF-like domain JHS88_22085 IPR005119 LysR, substrate-binding JHS88_22085 IPR000847 Transcription regulator HTH, LysR JHS88_22085 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_22085 IPR036390 Winged helix DNA-binding domain superfamily JHS88_22095 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_22095 IPR036390 Winged helix DNA-binding domain superfamily JHS88_22095 IPR000847 Transcription regulator HTH, LysR JHS88_22095 IPR005119 LysR, substrate-binding JHS88_22100 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JHS88_22100 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JHS88_22100 IPR037523 Vicinal oxygen chelate (VOC) domain JHS88_22105 IPR002589 Macro domain JHS88_22110 IPR008928 Six-hairpin glycosidase superfamily JHS88_22110 IPR012341 Six-hairpin glycosidase-like superfamily JHS88_22110 IPR001661 Glycoside hydrolase, family 37 JHS88_22120 IPR001279 Metallo-beta-lactamase JHS88_22120 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D JHS88_22120 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like JHS88_22130 IPR004638 Drug resistance transporter EmrB-like JHS88_22130 IPR011701 Major facilitator superfamily JHS88_22130 IPR020846 Major facilitator superfamily domain JHS88_22130 IPR036259 MFS transporter superfamily JHS88_22135 IPR039562 Membrane fusion protein, biotin-lipoyl like domain JHS88_22140 IPR005618 Outer membrane protein, OmpW JHS88_22140 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel JHS88_22145 IPR001646 Pentapeptide repeat JHS88_22160 IPR041029 N-acetylglucosamine binding protein A domain 2 JHS88_22160 IPR004302 Cellulose/chitin-binding protein, N-terminal JHS88_22160 IPR014756 Immunoglobulin E-set JHS88_22165 IPR036390 Winged helix DNA-binding domain superfamily JHS88_22165 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_22165 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain JHS88_22165 IPR019888 Transcription regulator AsnC-type JHS88_22165 IPR011008 Dimeric alpha-beta barrel JHS88_22165 IPR000485 AsnC-type HTH domain JHS88_22165 IPR011991 ArsR-like helix-turn-helix domain JHS88_22165 IPR019885 Transcription regulator HTH, AsnC-type, conserved site JHS88_22170 IPR001123 Amino acid exporter protein, LeuE-type JHS88_22175 IPR007037 Siderophore-interacting protein, C-terminal domain JHS88_22175 IPR039374 Siderophore-interacting protein JHS88_22175 IPR017938 Riboflavin synthase-like beta-barrel JHS88_22175 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JHS88_22175 IPR017927 FAD-binding domain, ferredoxin reductase-type JHS88_22175 IPR013113 FAD-binding 9, siderophore-interacting JHS88_22180 IPR027946 Oligogalacturonate lyase domain JHS88_22180 IPR015943 WD40/YVTN repeat-like-containing domain superfamily JHS88_22185 IPR001734 Sodium/solute symporter JHS88_22185 IPR018212 Sodium/solute symporter, conserved site JHS88_22185 IPR038377 Sodium/glucose symporter superfamily JHS88_22190 IPR011050 Pectin lyase fold/virulence factor JHS88_22190 IPR039448 Right handed beta helix domain JHS88_22190 IPR012334 Pectin lyase fold JHS88_22205 IPR000887 KDPG/KHG aldolase JHS88_22205 IPR013785 Aldolase-type TIM barrel JHS88_22205 IPR031338 KDPG/KHG aldolase, active site 2 JHS88_22205 IPR031337 KDPG/KHG aldolase, active site 1 JHS88_22210 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site JHS88_22210 IPR011611 Carbohydrate kinase PfkB JHS88_22210 IPR029056 Ribokinase-like JHS88_22225 IPR011051 RmlC-like cupin domain superfamily JHS88_22225 IPR025499 Pectin degradation protein KdgF JHS88_22225 IPR013096 Cupin 2, conserved barrel JHS88_22225 IPR014710 RmlC-like jelly roll fold JHS88_22230 IPR019629 Uncharacterised protein family HI1736/YgjV JHS88_22230 IPR026267 Inner membrane protein YgjV JHS88_22235 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase JHS88_22235 IPR036291 NAD(P)-binding domain superfamily JHS88_22235 IPR020904 Short-chain dehydrogenase/reductase, conserved site JHS88_22235 IPR002347 Short-chain dehydrogenase/reductase SDR JHS88_22240 IPR005471 Transcription regulator IclR, N-terminal JHS88_22240 IPR029016 GAF-like domain superfamily JHS88_22240 IPR014757 Transcription regulator IclR, C-terminal JHS88_22240 IPR036390 Winged helix DNA-binding domain superfamily JHS88_22240 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_22240 IPR011991 ArsR-like helix-turn-helix domain JHS88_22255 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_22255 IPR036390 Winged helix DNA-binding domain superfamily JHS88_22255 IPR000847 Transcription regulator HTH, LysR JHS88_22255 IPR005119 LysR, substrate-binding JHS88_22260 IPR038765 Papain-like cysteine peptidase superfamily JHS88_22260 IPR001447 Arylamine N-acetyltransferase JHS88_22265 IPR013149 Alcohol dehydrogenase, C-terminal JHS88_22265 IPR020843 Polyketide synthase, enoylreductase domain JHS88_22265 IPR014183 Alcohol dehydrogenase class III JHS88_22265 IPR013154 Alcohol dehydrogenase, N-terminal JHS88_22265 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site JHS88_22265 IPR011032 GroES-like superfamily JHS88_22265 IPR036291 NAD(P)-binding domain superfamily JHS88_22270 IPR014186 S-formylglutathione hydrolase JHS88_22270 IPR029058 Alpha/Beta hydrolase fold JHS88_22270 IPR000801 Putative esterase JHS88_22280 IPR033417 Periplasmic sensor domain CHASE8 JHS88_22280 IPR029787 Nucleotide cyclase JHS88_22280 IPR003660 HAMP domain JHS88_22280 IPR000160 GGDEF domain JHS88_22290 IPR000150 Cof family JHS88_22290 IPR036412 HAD-like superfamily JHS88_22290 IPR006379 HAD-superfamily hydrolase, subfamily IIB JHS88_22290 IPR023214 HAD superfamily JHS88_22295 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_22295 IPR005119 LysR, substrate-binding JHS88_22295 IPR000847 Transcription regulator HTH, LysR JHS88_22295 IPR036390 Winged helix DNA-binding domain superfamily JHS88_22310 IPR006225 Pseudouridine synthase, RluC/RluD JHS88_22310 IPR006145 Pseudouridine synthase, RsuA/RluA JHS88_22310 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site JHS88_22310 IPR020103 Pseudouridine synthase, catalytic domain superfamily JHS88_22315 IPR002528 Multi antimicrobial extrusion protein JHS88_22320 IPR029787 Nucleotide cyclase JHS88_22320 IPR003660 HAMP domain JHS88_22320 IPR000160 GGDEF domain JHS88_22320 IPR035919 EAL domain superfamily JHS88_22320 IPR001633 EAL domain JHS88_22330 IPR014710 RmlC-like jelly roll fold JHS88_22330 IPR011051 RmlC-like cupin domain superfamily JHS88_22330 IPR009664 Pyrimidine/purine nucleoside phosphorylase JHS88_22340 IPR001579 Glycoside hydrolase, chitinase active site JHS88_22340 IPR001223 Glycoside hydrolase family 18, catalytic domain JHS88_22340 IPR014756 Immunoglobulin E-set JHS88_22340 IPR013540 Chitinase A N-terminal JHS88_22340 IPR022409 PKD/Chitinase domain JHS88_22340 IPR017853 Glycoside hydrolase superfamily JHS88_22340 IPR029070 Chitinase insertion domain superfamily JHS88_22340 IPR013783 Immunoglobulin-like fold JHS88_22340 IPR036573 Carbohydrate-binding module superfamily 5/12 JHS88_22340 IPR003610 Carbohydrate-binding module family 5/12 JHS88_22340 IPR002126 Cadherin-like JHS88_22340 IPR011583 Chitinase II JHS88_22360 IPR004680 Citrate transporter-like domain JHS88_22360 IPR004672 Na+/H+ antiporter NhaD JHS88_22370 IPR003740 Uncharacterised membrane protein YitT JHS88_22380 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_22380 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily JHS88_22380 IPR023546 Methylated-DNA--protein-cysteine methyltransferase JHS88_22380 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain JHS88_22380 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain JHS88_22380 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding JHS88_22380 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site JHS88_22385 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily JHS88_22385 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal JHS88_22385 IPR000035 Alkylbase DNA glycosidase, conserved site JHS88_22385 IPR003265 HhH-GPD domain JHS88_22385 IPR011257 DNA glycosylase JHS88_22385 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal JHS88_22395 IPR032808 DoxX family JHS88_22400 IPR012093 Pirin JHS88_22400 IPR003829 Pirin, N-terminal domain JHS88_22400 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain JHS88_22400 IPR014710 RmlC-like jelly roll fold JHS88_22400 IPR011051 RmlC-like cupin domain superfamily JHS88_22405 IPR036390 Winged helix DNA-binding domain superfamily JHS88_22405 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_22405 IPR005119 LysR, substrate-binding JHS88_22405 IPR020890 Transcription regulator HTH, HdfR JHS88_22405 IPR000847 Transcription regulator HTH, LysR JHS88_22420 IPR018321 Glucosamine-6-phosphate isomerase, conserved site JHS88_22420 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase JHS88_22420 IPR004547 Glucosamine-6-phosphate isomerase JHS88_22420 IPR037171 NagB/RpiA transferase-like JHS88_22430 IPR004445 Sodium/glutamate symport carrier protein GltS JHS88_22435 IPR015424 Pyridoxal phosphate-dependent transferase JHS88_22435 IPR004839 Aminotransferase, class I/classII JHS88_22435 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JHS88_22435 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JHS88_22435 IPR036390 Winged helix DNA-binding domain superfamily JHS88_22435 IPR000524 Transcription regulator HTH, GntR JHS88_22435 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_22440 IPR003593 AAA+ ATPase domain JHS88_22440 IPR003439 ABC transporter-like JHS88_22440 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_22450 IPR004445 Sodium/glutamate symport carrier protein GltS JHS88_22455 IPR018357 Hexapeptide transferase, conserved site JHS88_22455 IPR011004 Trimeric LpxA-like superfamily JHS88_22455 IPR001451 Hexapeptide repeat JHS88_22470 IPR004090 Chemotaxis methyl-accepting receptor JHS88_22470 IPR003660 HAMP domain JHS88_22470 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JHS88_22470 IPR033480 Single Cache domain 2 JHS88_22470 IPR000727 Target SNARE coiled-coil homology domain JHS88_22475 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain JHS88_22475 IPR029000 Cyclophilin-like domain superfamily JHS88_22475 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase JHS88_22475 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site JHS88_22485 IPR001789 Signal transduction response regulator, receiver domain JHS88_22485 IPR007492 LytTR DNA-binding domain JHS88_22485 IPR011006 CheY-like superfamily JHS88_22490 IPR010559 Signal transduction histidine kinase, internal region JHS88_22490 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region JHS88_22490 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_22490 IPR003018 GAF domain JHS88_22490 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_22510 IPR003439 ABC transporter-like JHS88_22510 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_22510 IPR003593 AAA+ ATPase domain JHS88_22510 IPR017871 ABC transporter, conserved site JHS88_22510 IPR015854 ABC transporter, lipoprotein release, LolD JHS88_22510 IPR011924 Lipoprotein releasing system, ATP-binding protein JHS88_22520 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site JHS88_22520 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB JHS88_22520 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA JHS88_22525 IPR017856 Integrase-like, N-terminal JHS88_22525 IPR029072 YebC-like JHS88_22525 IPR026564 Transcriptional regulator TACO1-like, domain 3 JHS88_22525 IPR002876 Transcriptional regulator TACO1-like JHS88_22535 IPR003660 HAMP domain JHS88_22535 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_22535 IPR001789 Signal transduction response regulator, receiver domain JHS88_22535 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain JHS88_22535 IPR033414 Periplasmic sensor domain JHS88_22535 IPR036641 HPT domain superfamily JHS88_22535 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JHS88_22535 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JHS88_22535 IPR005467 Histidine kinase domain JHS88_22535 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_22535 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JHS88_22535 IPR011006 CheY-like superfamily JHS88_22545 IPR037238 YbiA-like superfamily JHS88_22545 IPR036144 RibA-like superfamily JHS88_22545 IPR000926 GTP cyclohydrolase II, RibA JHS88_22545 IPR032677 GTP cyclohydrolase II JHS88_22545 IPR012816 NADAR JHS88_22555 IPR003593 AAA+ ATPase domain JHS88_22555 IPR003439 ABC transporter-like JHS88_22555 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal JHS88_22555 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_22555 IPR017871 ABC transporter, conserved site JHS88_22560 IPR003593 AAA+ ATPase domain JHS88_22560 IPR003439 ABC transporter-like JHS88_22560 IPR017871 ABC transporter, conserved site JHS88_22560 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal JHS88_22560 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_22575 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_22575 IPR025669 AAA domain JHS88_22575 IPR041250 ParA helix turn helix domain JHS88_22580 IPR004437 ParB/RepB/Spo0J partition protein JHS88_22580 IPR036086 ParB/Sulfiredoxin superfamily JHS88_22580 IPR014884 ParB protein family, C-terminal JHS88_22580 IPR003115 ParB/Sulfiredoxin JHS88_22585 IPR032672 TmcA/NAT10/Kre33 JHS88_22585 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA JHS88_22585 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_22585 IPR007807 Helicase domain JHS88_22585 IPR016181 Acyl-CoA N-acyltransferase JHS88_22585 IPR000182 GNAT domain JHS88_22595 IPR001451 Hexapeptide repeat JHS88_22595 IPR018357 Hexapeptide transferase, conserved site JHS88_22595 IPR011004 Trimeric LpxA-like superfamily JHS88_22605 IPR005320 Peptidase S51 JHS88_22605 IPR029062 Class I glutamine amidotransferase-like JHS88_22610 IPR033900 Porin domain, Gram-negative type JHS88_22610 IPR001702 Porin, Gram-negative type JHS88_22610 IPR001897 Porin, gammaproteobacterial JHS88_22610 IPR023614 Porin domain superfamily JHS88_22615 IPR013013 Phosphotransferase system, EIIC component, type 1 JHS88_22615 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site JHS88_22615 IPR036878 Glucose permease domain IIB JHS88_22615 IPR003352 Phosphotransferase system, EIIC JHS88_22615 IPR001996 Phosphotransferase system, IIB component, type 1 JHS88_22620 IPR001347 Sugar isomerase (SIS) JHS88_22620 IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein JHS88_22620 IPR005486 Glucokinase regulatory protein, conserved site JHS88_22620 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ JHS88_22625 IPR001347 Sugar isomerase (SIS) JHS88_22625 IPR022821 Transcription regulator HTH, MurR JHS88_22625 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_22625 IPR000281 Helix-turn-helix protein RpiR JHS88_22625 IPR009057 Homeobox-like domain superfamily JHS88_22625 IPR035472 RpiR-like, SIS domain JHS88_22630 IPR000834 Peptidase M14, carboxypeptidase A JHS88_22635 IPR030678 Peptide/nickel binding protein, MppA-type JHS88_22635 IPR039424 Solute-binding protein family 5 JHS88_22635 IPR023765 Solute-binding protein family 5, conserved site JHS88_22635 IPR000914 Solute-binding protein family 5 domain JHS88_22640 IPR010089 Flavoprotein WrbA-like JHS88_22640 IPR008254 Flavodoxin/nitric oxide synthase JHS88_22640 IPR029039 Flavoprotein-like superfamily JHS88_22640 IPR005025 NADPH-dependent FMN reductase-like JHS88_22640 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic JHS88_22660 IPR003439 ABC transporter-like JHS88_22660 IPR003593 AAA+ ATPase domain JHS88_22660 IPR039421 Type I protein exporter JHS88_22660 IPR036640 ABC transporter type 1, transmembrane domain superfamily JHS88_22660 IPR010132 ATPase, type I secretion system, HlyB JHS88_22660 IPR017871 ABC transporter, conserved site JHS88_22660 IPR011527 ABC transporter type 1, transmembrane domain JHS88_22660 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_22660 IPR005074 Peptidase C39, bacteriocin processing JHS88_22660 IPR039395 Peptidase C39-like A JHS88_22675 IPR010129 Type I secretion membrane fusion protein, HlyD family JHS88_22675 IPR006144 Secretion protein HlyD, conserved site JHS88_22680 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 JHS88_22680 IPR002078 RNA polymerase sigma factor 54 interaction domain JHS88_22680 IPR003593 AAA+ ATPase domain JHS88_22680 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JHS88_22680 IPR009057 Homeobox-like domain superfamily JHS88_22680 IPR002197 DNA binding HTH domain, Fis-type JHS88_22680 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_22680 IPR001789 Signal transduction response regulator, receiver domain JHS88_22680 IPR025944 Sigma-54 interaction domain, conserved site JHS88_22680 IPR011006 CheY-like superfamily JHS88_22685 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_22685 IPR033479 Double Cache domain 1 JHS88_22685 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_22685 IPR005467 Histidine kinase domain JHS88_22685 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JHS88_22685 IPR029151 Periplasmic sensor-like domain superfamily JHS88_22685 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JHS88_22685 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) JHS88_22685 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JHS88_22695 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative JHS88_22695 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal JHS88_22695 IPR012349 FMN-binding split barrel JHS88_22695 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site JHS88_22695 IPR000659 Pyridoxamine 5'-phosphate oxidase JHS88_22705 IPR020449 Transcription regulator HTH, AraC- type JHS88_22705 IPR011051 RmlC-like cupin domain superfamily JHS88_22705 IPR014710 RmlC-like jelly roll fold JHS88_22705 IPR018062 HTH domain AraC-type, conserved site JHS88_22705 IPR018060 DNA binding HTH domain, AraC-type JHS88_22705 IPR009057 Homeobox-like domain superfamily JHS88_22710 IPR024090 Proline dehydrogenase PutA, domain I JHS88_22710 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 JHS88_22710 IPR024089 Proline dehydrogenase PutA, domain I/II JHS88_22710 IPR013321 Arc-type ribbon-helix-helix JHS88_22710 IPR024082 Proline dehydrogenase PutA, domain II JHS88_22710 IPR002872 Proline dehydrogenase domain JHS88_22710 IPR010985 Ribbon-helix-helix JHS88_22710 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain JHS88_22710 IPR025703 Bifunctional protein PutA JHS88_22710 IPR029041 FAD-linked oxidoreductase-like JHS88_22710 IPR016161 Aldehyde/histidinol dehydrogenase JHS88_22710 IPR016163 Aldehyde dehydrogenase, C-terminal JHS88_22710 IPR016160 Aldehyde dehydrogenase, cysteine active site JHS88_22710 IPR029510 Aldehyde dehydrogenase, glutamic acid active site JHS88_22710 IPR016162 Aldehyde dehydrogenase, N-terminal JHS88_22710 IPR015590 Aldehyde dehydrogenase domain JHS88_22720 IPR018212 Sodium/solute symporter, conserved site JHS88_22720 IPR001734 Sodium/solute symporter JHS88_22720 IPR011851 Sodium/proline symporter JHS88_22720 IPR038377 Sodium/glucose symporter superfamily JHS88_22755 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain JHS88_22755 IPR011991 ArsR-like helix-turn-helix domain JHS88_22755 IPR011008 Dimeric alpha-beta barrel JHS88_22755 IPR036390 Winged helix DNA-binding domain superfamily JHS88_22755 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_22755 IPR019885 Transcription regulator HTH, AsnC-type, conserved site JHS88_22755 IPR000485 AsnC-type HTH domain JHS88_22755 IPR019888 Transcription regulator AsnC-type JHS88_22780 IPR001387 Cro/C1-type helix-turn-helix domain JHS88_22780 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_22780 IPR010982 Lambda repressor-like, DNA-binding domain superfamily JHS88_22780 IPR009084 B transposition protein, C-terminal JHS88_22780 IPR003593 AAA+ ATPase domain JHS88_22780 IPR036733 B transposition protein, C-terminal domain superfamily JHS88_22830 IPR032710 NTF2-like domain superfamily JHS88_22830 IPR004027 SEC-C motif JHS88_22830 IPR023006 Uncharacterised protein family UPF0225 JHS88_22990 IPR002941 DNA methylase N-4/N-6 JHS88_22990 IPR002052 DNA methylase, N-6 adenine-specific, conserved site JHS88_22990 IPR001091 Restriction/modification DNA-methylase JHS88_22990 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_23015 IPR039421 Type I protein exporter JHS88_23015 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_23015 IPR017871 ABC transporter, conserved site JHS88_23015 IPR003593 AAA+ ATPase domain JHS88_23015 IPR036640 ABC transporter type 1, transmembrane domain superfamily JHS88_23015 IPR011527 ABC transporter type 1, transmembrane domain JHS88_23015 IPR003439 ABC transporter-like JHS88_23025 IPR009594 Transcription regulator HTH, AraC, N-terminal JHS88_23025 IPR009057 Homeobox-like domain superfamily JHS88_23025 IPR018060 DNA binding HTH domain, AraC-type JHS88_23040 IPR011545 DEAD/DEAH box helicase domain JHS88_23040 IPR014001 Helicase superfamily 1/2, ATP-binding domain JHS88_23040 IPR001650 Helicase, C-terminal JHS88_23040 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_23040 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site JHS88_23040 IPR014014 RNA helicase, DEAD-box type, Q motif JHS88_23040 IPR028622 ATP-dependent RNA helicase RhlE JHS88_23045 IPR005163 3-alpha domain JHS88_23045 IPR011037 Pyruvate kinase-like, insert domain superfamily JHS88_23045 IPR005302 Molybdenum cofactor sulfurase, C-terminal JHS88_23060 IPR036291 NAD(P)-binding domain superfamily JHS88_23060 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal JHS88_23060 IPR001088 Glycoside hydrolase, family 4 JHS88_23060 IPR019802 Glycoside hydrolase, family 4, conserved site JHS88_23060 IPR022616 Glycosyl hydrolase, family 4, C-terminal JHS88_23065 IPR011781 D-serine deaminase transcriptional activator JHS88_23065 IPR005119 LysR, substrate-binding JHS88_23065 IPR000847 Transcription regulator HTH, LysR JHS88_23065 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_23065 IPR036390 Winged helix DNA-binding domain superfamily JHS88_23070 IPR029151 Periplasmic sensor-like domain superfamily JHS88_23070 IPR000727 Target SNARE coiled-coil homology domain JHS88_23070 IPR004090 Chemotaxis methyl-accepting receptor JHS88_23070 IPR033479 Double Cache domain 1 JHS88_23070 IPR003660 HAMP domain JHS88_23070 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JHS88_23080 IPR013324 RNA polymerase sigma factor, region 3/4-like JHS88_23080 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_23080 IPR013325 RNA polymerase sigma factor, region 2 JHS88_23080 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 JHS88_23080 IPR007627 RNA polymerase sigma-70 region 2 JHS88_23080 IPR039425 RNA polymerase sigma-70 like JHS88_23080 IPR014284 RNA polymerase sigma-70 like domain JHS88_23085 IPR029062 Class I glutamine amidotransferase-like JHS88_23085 IPR018060 DNA binding HTH domain, AraC-type JHS88_23085 IPR009057 Homeobox-like domain superfamily JHS88_23085 IPR018062 HTH domain AraC-type, conserved site JHS88_23085 IPR002818 DJ-1/PfpI JHS88_23090 IPR005119 LysR, substrate-binding JHS88_23090 IPR036390 Winged helix DNA-binding domain superfamily JHS88_23090 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_23090 IPR000847 Transcription regulator HTH, LysR JHS88_23105 IPR012081 Alkyl hydroperoxide reductase subunit F JHS88_23105 IPR036188 FAD/NAD(P)-binding domain superfamily JHS88_23105 IPR002109 Glutaredoxin JHS88_23105 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site JHS88_23105 IPR012336 Thioredoxin-like fold JHS88_23105 IPR036249 Thioredoxin-like superfamily JHS88_23105 IPR023753 FAD/NAD(P)-binding domain JHS88_23110 IPR017559 Alkyl hydroperoxide reductase subunit C JHS88_23110 IPR024706 Peroxiredoxin, AhpC-type JHS88_23110 IPR019479 Peroxiredoxin, C-terminal JHS88_23110 IPR036249 Thioredoxin-like superfamily JHS88_23110 IPR013766 Thioredoxin domain JHS88_23110 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant JHS88_23115 IPR000835 MarR-type HTH domain JHS88_23115 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_23115 IPR036390 Winged helix DNA-binding domain superfamily JHS88_23120 IPR015946 K homology domain-like, alpha/beta JHS88_23120 IPR019953 Organic hydroperoxide resistance protein famiy JHS88_23120 IPR003718 OsmC/Ohr family JHS88_23120 IPR036102 OsmC/Ohr superfamily JHS88_23135 IPR020449 Transcription regulator HTH, AraC- type JHS88_23135 IPR018062 HTH domain AraC-type, conserved site JHS88_23135 IPR018060 DNA binding HTH domain, AraC-type JHS88_23135 IPR009057 Homeobox-like domain superfamily JHS88_23135 IPR003313 AraC-type arabinose-binding/dimerisation domain JHS88_23135 IPR037923 Transcription regulator HTH-like JHS88_23145 IPR024664 L-arabinose isomerase, C-terminal JHS88_23145 IPR038583 L-arabinose isomerase, N-terminal domain superfamily JHS88_23145 IPR004216 L-fucose/L-arabinose isomerase, C-terminal JHS88_23145 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily JHS88_23145 IPR003762 L-arabinose isomerase JHS88_23150 IPR001303 Class II aldolase/adducin N-terminal JHS88_23150 IPR036409 Class II aldolase/adducin N-terminal domain superfamily JHS88_23150 IPR023499 L-ribulose-5-phosphate 4-epimerase UlaF JHS88_23155 IPR005929 Ribulokinase JHS88_23155 IPR000577 Carbohydrate kinase, FGGY JHS88_23155 IPR018485 Carbohydrate kinase, FGGY, C-terminal JHS88_23155 IPR018484 Carbohydrate kinase, FGGY, N-terminal JHS88_23160 IPR026266 L-arabinose-binding periplasmic protein JHS88_23160 IPR001761 Periplasmic binding protein/LacI sugar binding domain JHS88_23160 IPR028082 Periplasmic binding protein-like I JHS88_23165 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_23165 IPR017917 ABC transporter, arabinose import, ATP-binding protein, AraG JHS88_23165 IPR017871 ABC transporter, conserved site JHS88_23165 IPR003593 AAA+ ATPase domain JHS88_23165 IPR003439 ABC transporter-like JHS88_23170 IPR001851 ABC transporter, permease JHS88_23175 IPR009000 Translation protein, beta-barrel domain superfamily JHS88_23175 IPR001539 Peptidase U32 JHS88_23185 IPR001996 Phosphotransferase system, IIB component, type 1 JHS88_23185 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component JHS88_23185 IPR011299 PTS system glucose-specific IIBC component JHS88_23185 IPR013013 Phosphotransferase system, EIIC component, type 1 JHS88_23185 IPR003352 Phosphotransferase system, EIIC JHS88_23185 IPR036878 Glucose permease domain IIB JHS88_23185 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site JHS88_23190 IPR039420 Transcriptional regulatory protein WalR-like JHS88_23190 IPR001789 Signal transduction response regulator, receiver domain JHS88_23190 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_23190 IPR001867 OmpR/PhoB-type DNA-binding domain JHS88_23190 IPR016032 Signal transduction response regulator, C-terminal effector JHS88_23190 IPR011006 CheY-like superfamily JHS88_23195 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_23195 IPR013727 Two-component sensor kinase, N-terminal JHS88_23195 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JHS88_23195 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JHS88_23195 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JHS88_23195 IPR005467 Histidine kinase domain JHS88_23195 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_23195 IPR003660 HAMP domain JHS88_23200 IPR006059 Bacterial extracellular solute-binding protein JHS88_23205 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal JHS88_23205 IPR002433 Ornithine decarboxylase JHS88_23205 IPR000183 Ornithine/DAP/Arg decarboxylase JHS88_23205 IPR029066 PLP-binding barrel JHS88_23205 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal JHS88_23205 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal JHS88_23205 IPR022272 Lipocalin family conserved site JHS88_23210 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal JHS88_23210 IPR022770 Ferric iron reductase FhuF domain JHS88_23210 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like JHS88_23220 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like JHS88_23220 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal JHS88_23220 IPR022770 Ferric iron reductase FhuF domain JHS88_23230 IPR010105 TonB-dependent siderophore receptor JHS88_23230 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily JHS88_23230 IPR000531 TonB-dependent receptor-like, beta-barrel JHS88_23230 IPR039423 TonB-dependent receptor-like JHS88_23230 IPR037066 TonB-dependent receptor, plug domain superfamily JHS88_23230 IPR012910 TonB-dependent receptor, plug domain JHS88_23235 IPR011662 Secretin/TonB, short N-terminal domain JHS88_23235 IPR037066 TonB-dependent receptor, plug domain superfamily JHS88_23235 IPR010105 TonB-dependent siderophore receptor JHS88_23235 IPR012910 TonB-dependent receptor, plug domain JHS88_23235 IPR010917 TonB-dependent receptor, conserved site JHS88_23235 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily JHS88_23235 IPR010916 TonB box, conserved site JHS88_23235 IPR000531 TonB-dependent receptor-like, beta-barrel JHS88_23240 IPR002491 ABC transporter periplasmic binding domain JHS88_23245 IPR000522 ABC transporter, permease protein, BtuC-like JHS88_23245 IPR037294 ABC transporter, BtuC-like JHS88_23250 IPR000522 ABC transporter, permease protein, BtuC-like JHS88_23250 IPR037294 ABC transporter, BtuC-like JHS88_23255 IPR003439 ABC transporter-like JHS88_23255 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_23255 IPR017871 ABC transporter, conserved site JHS88_23255 IPR003593 AAA+ ATPase domain JHS88_23260 IPR033480 Single Cache domain 2 JHS88_23260 IPR003660 HAMP domain JHS88_23260 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain JHS88_23260 IPR004090 Chemotaxis methyl-accepting receptor JHS88_23265 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like JHS88_23265 IPR011765 Peptidase M16, N-terminal JHS88_23265 IPR001431 Peptidase M16, zinc-binding site JHS88_23265 IPR007863 Peptidase M16, C-terminal JHS88_23275 IPR011055 Duplicated hybrid motif JHS88_23275 IPR007340 Opacity-associated protein A JHS88_23275 IPR016047 Peptidase M23 JHS88_23285 IPR020846 Major facilitator superfamily domain JHS88_23285 IPR036259 MFS transporter superfamily JHS88_23285 IPR023697 Multidrug resistance protein MdtL JHS88_23285 IPR011701 Major facilitator superfamily JHS88_23295 IPR013783 Immunoglobulin-like fold JHS88_23295 IPR017853 Glycoside hydrolase superfamily JHS88_23295 IPR014756 Immunoglobulin E-set JHS88_23295 IPR013780 Glycosyl hydrolase, all-beta JHS88_23295 IPR004193 Glycoside hydrolase, family 13, N-terminal JHS88_23295 IPR011837 Glycogen debranching enzyme, GlgX type JHS88_23295 IPR006047 Glycosyl hydrolase, family 13, catalytic domain JHS88_23300 IPR023738 Maltoporin JHS88_23300 IPR003192 Porin, LamB-type JHS88_23300 IPR036998 Porin, LamB-type superfamily JHS88_23315 IPR013783 Immunoglobulin-like fold JHS88_23315 IPR032091 Maltogenic Amylase, C-terminal JHS88_23315 IPR013780 Glycosyl hydrolase, all-beta JHS88_23315 IPR006047 Glycosyl hydrolase, family 13, catalytic domain JHS88_23315 IPR017853 Glycoside hydrolase superfamily JHS88_23315 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain JHS88_23320 IPR007346 Endonuclease I JHS88_23325 IPR013784 Carbohydrate-binding-like fold JHS88_23325 IPR005323 Pullulanase, carbohydrate-binding module 41 JHS88_23325 IPR006047 Glycosyl hydrolase, family 13, catalytic domain JHS88_23325 IPR004193 Glycoside hydrolase, family 13, N-terminal JHS88_23325 IPR013780 Glycosyl hydrolase, all-beta JHS88_23325 IPR017853 Glycoside hydrolase superfamily JHS88_23325 IPR013783 Immunoglobulin-like fold JHS88_23325 IPR014756 Immunoglobulin E-set JHS88_23325 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal JHS88_23325 IPR041111 Pullulanase, Ins domain JHS88_23325 IPR040671 Pullulanase, N2 domain JHS88_23325 IPR011839 Alpha-1,6-glucosidases, pullulanase-type JHS88_23340 IPR015424 Pyridoxal phosphate-dependent transferase JHS88_23340 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JHS88_23340 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily JHS88_23340 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal JHS88_23340 IPR027464 Ornithine decarboxylase, N-terminal JHS88_23340 IPR000310 Orn/Lys/Arg decarboxylase, major domain JHS88_23340 IPR011193 Ornithine/lysine/arginine decarboxylase JHS88_23340 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal JHS88_23340 IPR027568 Ornithine decarboxylase SpeF JHS88_23340 IPR011006 CheY-like superfamily JHS88_23340 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JHS88_23345 IPR002293 Amino acid/polyamine transporter I JHS88_23345 IPR004754 Amino acid antiporter JHS88_23345 IPR027566 Putrescine transporter PotE JHS88_23355 IPR023685 Pyridoxal kinase PdxY JHS88_23355 IPR004625 Pyridoxine kinase JHS88_23355 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase JHS88_23355 IPR029056 Ribokinase-like JHS88_23365 IPR001991 Sodium:dicarboxylate symporter JHS88_23365 IPR023025 Serine/threonine transporter SstT JHS88_23365 IPR036458 Sodium:dicarboxylate symporter superfamily JHS88_23370 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_23370 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain JHS88_23370 IPR004881 Ribosome biogenesis GTPase RsgA JHS88_23370 IPR010914 RsgA GTPase domain JHS88_23375 IPR013013 Phosphotransferase system, EIIC component, type 1 JHS88_23375 IPR003352 Phosphotransferase system, EIIC JHS88_23375 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 JHS88_23375 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site JHS88_23375 IPR001996 Phosphotransferase system, IIB component, type 1 JHS88_23375 IPR011055 Duplicated hybrid motif JHS88_23375 IPR036878 Glucose permease domain IIB JHS88_23385 IPR003782 Copper chaperone SCO1/SenC JHS88_23385 IPR036249 Thioredoxin-like superfamily JHS88_23400 IPR000792 Transcription regulator LuxR, C-terminal JHS88_23400 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_23400 IPR016032 Signal transduction response regulator, C-terminal effector JHS88_23400 IPR011990 Tetratricopeptide-like helical domain superfamily JHS88_23400 IPR041617 MalT-like TPR region JHS88_23400 IPR023768 Transcriptional regulator HTH-type, MalT JHS88_23400 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_23405 IPR000811 Glycosyl transferase, family 35 JHS88_23405 IPR035090 Phosphorylase pyridoxal-phosphate attachment site JHS88_23405 IPR011833 Glycogen/starch/alpha-glucan phosphorylase JHS88_23410 IPR017853 Glycoside hydrolase superfamily JHS88_23410 IPR003385 Glycoside hydrolase, family 77 JHS88_23415 IPR013783 Immunoglobulin-like fold JHS88_23415 IPR014756 Immunoglobulin E-set JHS88_23415 IPR037439 1,4-alpha-glucan-branching enzyme JHS88_23415 IPR017853 Glycoside hydrolase superfamily JHS88_23415 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta JHS88_23415 IPR004193 Glycoside hydrolase, family 13, N-terminal JHS88_23415 IPR006047 Glycosyl hydrolase, family 13, catalytic domain JHS88_23415 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB JHS88_23415 IPR013780 Glycosyl hydrolase, all-beta JHS88_23420 IPR001264 Glycosyl transferase, family 51 JHS88_23420 IPR036950 Penicillin binding protein transglycosylase domain JHS88_23420 IPR011812 Biosynthetic peptidoglycan transglycosylase JHS88_23420 IPR023346 Lysozyme-like domain superfamily JHS88_23425 IPR014635 Alpha-amylase, MalS type JHS88_23425 IPR006047 Glycosyl hydrolase, family 13, catalytic domain JHS88_23425 IPR017853 Glycoside hydrolase superfamily JHS88_23440 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain JHS88_23445 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain JHS88_23450 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria JHS88_23450 IPR002933 Peptidase M20 JHS88_23450 IPR011650 Peptidase M20, dimerisation domain JHS88_23450 IPR036264 Bacterial exopeptidase dimerisation domain JHS88_23455 IPR010652 Domain of unknown function DUF1232 JHS88_23460 IPR034703 Proton/glutamate-aspartate symporter GltP JHS88_23460 IPR001991 Sodium:dicarboxylate symporter JHS88_23460 IPR018107 Sodium:dicarboxylate symporter, conserved site JHS88_23460 IPR036458 Sodium:dicarboxylate symporter superfamily JHS88_23460 IPR033380 Glutamate-aspartate symport protein GltP/GltT JHS88_23470 IPR005119 LysR, substrate-binding JHS88_23470 IPR000847 Transcription regulator HTH, LysR JHS88_23470 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_23470 IPR036390 Winged helix DNA-binding domain superfamily JHS88_23475 IPR011008 Dimeric alpha-beta barrel JHS88_23475 IPR014910 Putative monooxygenase YdhR JHS88_23485 IPR003856 Polysaccharide chain length determinant N-terminal domain JHS88_23485 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_23485 IPR005702 Exopolysaccharide synthesis protein JHS88_23485 IPR025669 AAA domain JHS88_23485 IPR032807 Tyrosine kinase, G-rich domain JHS88_23490 IPR023485 Phosphotyrosine protein phosphatase I JHS88_23490 IPR017867 Protein-tyrosine phosphatase, low molecular weight JHS88_23490 IPR036196 Phosphotyrosine protein phosphatase I superfamily JHS88_23495 IPR003715 Polysaccharide export protein JHS88_23495 IPR019554 Soluble ligand binding domain JHS88_23495 IPR040716 Outer-membrane lipoprotein Wza, C-terminal domain JHS88_23500 IPR016446 Flavin oxidoreductase Frp family JHS88_23500 IPR029479 Nitroreductase JHS88_23500 IPR000415 Nitroreductase-like JHS88_23505 IPR002771 Multiple antibiotic resistance (MarC)-related JHS88_23510 IPR002641 Patatin-like phospholipase domain JHS88_23510 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase JHS88_23510 IPR037483 YjjU-like JHS88_23515 IPR004302 Cellulose/chitin-binding protein, N-terminal JHS88_23515 IPR041029 N-acetylglucosamine binding protein A domain 2 JHS88_23515 IPR020879 N-acetylglucosamine-binding protein A JHS88_23515 IPR014756 Immunoglobulin E-set JHS88_23520 IPR001763 Rhodanese-like domain JHS88_23520 IPR036873 Rhodanese-like domain superfamily JHS88_23520 IPR020936 Uncharacterised protein family UPF0176 JHS88_23520 IPR040503 UPF0176, acylphosphatase-like domain JHS88_23530 IPR029058 Alpha/Beta hydrolase fold JHS88_23530 IPR000073 Alpha/beta hydrolase fold-1 JHS88_23530 IPR002410 Peptidase S33 JHS88_23535 IPR012338 Beta-lactamase/transpeptidase-like JHS88_23535 IPR015956 Penicillin-binding protein, C-terminal domain superfamily JHS88_23535 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A JHS88_23535 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal JHS88_23535 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily JHS88_23535 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal JHS88_23540 IPR013784 Carbohydrate-binding-like fold JHS88_23540 IPR006047 Glycosyl hydrolase, family 13, catalytic domain JHS88_23540 IPR013780 Glycosyl hydrolase, all-beta JHS88_23540 IPR017853 Glycoside hydrolase superfamily JHS88_23540 IPR002044 Carbohydrate binding module family 20 JHS88_23540 IPR031319 Alpha-amylase, C-terminal domain JHS88_23540 IPR013783 Immunoglobulin-like fold JHS88_23545 IPR009057 Homeobox-like domain superfamily JHS88_23545 IPR018060 DNA binding HTH domain, AraC-type JHS88_23545 IPR020449 Transcription regulator HTH, AraC- type JHS88_23545 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal JHS88_23550 IPR033878 Nitroreductase NfsB-like JHS88_23550 IPR029479 Nitroreductase JHS88_23550 IPR000415 Nitroreductase-like JHS88_23560 IPR036390 Winged helix DNA-binding domain superfamily JHS88_23560 IPR005119 LysR, substrate-binding JHS88_23560 IPR000847 Transcription regulator HTH, LysR JHS88_23560 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_23565 IPR036361 SAP domain superfamily JHS88_23565 IPR018668 DNA-binding protein VF530-like JHS88_23575 IPR017938 Riboflavin synthase-like beta-barrel JHS88_23575 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain JHS88_23575 IPR001433 Oxidoreductase FAD/NAD(P)-binding JHS88_23575 IPR017927 FAD-binding domain, ferredoxin reductase-type JHS88_23575 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain JHS88_23575 IPR033892 Ferredoxin--NADP reductase, bacteria JHS88_23585 IPR018635 Uncharacterised protein family UPF0319 JHS88_23590 IPR002549 Transmembrane protein TqsA-like JHS88_23600 IPR006143 RND efflux pump, membrane fusion protein JHS88_23600 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA JHS88_23600 IPR039562 Membrane fusion protein, biotin-lipoyl like domain JHS88_23620 IPR000620 EamA domain JHS88_23625 IPR036390 Winged helix DNA-binding domain superfamily JHS88_23625 IPR005119 LysR, substrate-binding JHS88_23625 IPR000847 Transcription regulator HTH, LysR JHS88_23625 IPR023746 Transcription regulator HTH, YidZ JHS88_23625 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_23625 IPR037402 HTH-type transcriptional regulator YidZ, PBP2 domain JHS88_23630 IPR011701 Major facilitator superfamily JHS88_23630 IPR020846 Major facilitator superfamily domain JHS88_23630 IPR036259 MFS transporter superfamily JHS88_23630 IPR023697 Multidrug resistance protein MdtL JHS88_23630 IPR005829 Sugar transporter, conserved site JHS88_23645 IPR016181 Acyl-CoA N-acyltransferase JHS88_23645 IPR000182 GNAT domain JHS88_23655 IPR033919 Transaldolase/Fructose-6-phosphate aldolase, archaeal/bacterial JHS88_23655 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase JHS88_23655 IPR018225 Transaldolase, active site JHS88_23655 IPR023001 Fructose-6-phosphate aldolase JHS88_23655 IPR013785 Aldolase-type TIM barrel JHS88_23655 IPR001585 Transaldolase/Fructose-6-phosphate aldolase JHS88_23660 IPR013785 Aldolase-type TIM barrel JHS88_23660 IPR034457 Organic radical-activating enzymes JHS88_23660 IPR012839 Organic radical enzyme activase JHS88_23660 IPR034465 Pyruvate formate-lyase activase JHS88_23660 IPR001989 Radical-activating enzyme, conserved site JHS88_23660 IPR007197 Radical SAM JHS88_23665 IPR004184 Pyruvate formate lyase domain JHS88_23665 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family JHS88_23665 IPR019777 Formate C-acetyltransferase glycine radical, conserved site JHS88_23665 IPR001150 Glycine radical domain JHS88_23685 IPR012544 Bacterial Pleckstrin homology domain JHS88_23685 IPR037063 Bacterial Pleckstrin homology domain superfamily JHS88_23695 IPR025713 Motility protein B, N-terminal domain JHS88_23695 IPR006665 OmpA-like domain JHS88_23695 IPR036737 OmpA-like domain superfamily JHS88_23700 IPR000540 Flagellar motor protein MotA, conserved site JHS88_23700 IPR022522 Flagellar motor stator, MotA JHS88_23700 IPR002898 MotA/TolQ/ExbB proton channel JHS88_23705 IPR007630 RNA polymerase sigma-70 region 4 JHS88_23705 IPR013325 RNA polymerase sigma factor, region 2 JHS88_23705 IPR013324 RNA polymerase sigma factor, region 3/4-like JHS88_23705 IPR000943 RNA polymerase sigma-70 JHS88_23705 IPR007627 RNA polymerase sigma-70 region 2 JHS88_23705 IPR014284 RNA polymerase sigma-70 like domain JHS88_23705 IPR012845 RNA polymerase sigma factor, FliA/WhiG JHS88_23710 IPR005503 Flagellar basal body-associated protein FliL JHS88_23725 IPR036584 Flagellar protein FliS superfamily JHS88_23725 IPR003713 Flagellar protein FliS JHS88_23730 IPR010810 Flagellin hook, IN motif JHS88_23730 IPR040026 Flagellar hook-associated protein 2 JHS88_23730 IPR010809 Flagellar hook-associated protein 2, C-terminal JHS88_23730 IPR003481 Flagellar hook-associated protein 2, N-terminal JHS88_23740 IPR042187 Flagellin, C-terminal domain, subdomain 2 JHS88_23740 IPR001492 Flagellin JHS88_23740 IPR001029 Flagellin, D0/D1 domain JHS88_23750 IPR042193 FHIPEP, domain 3 JHS88_23750 IPR006301 Flagellar biosynthesis protein FlhA JHS88_23750 IPR001712 Type III secretion system FHIPEP JHS88_23750 IPR025505 FHIPEP conserved site JHS88_23750 IPR042196 FHIPEP, domain 4 JHS88_23750 IPR042194 FHIPEP, domain 1 JHS88_23755 IPR006136 Flagellar biosynthetic protein FlhB JHS88_23755 IPR006135 Type III secretion system substrate exporter JHS88_23755 IPR029025 Type III secretion system substrate exporter, C-terminal JHS88_23760 IPR006303 Flagellar biosynthesis protein FliR JHS88_23760 IPR002010 Type III secretion system inner membrane R protein JHS88_23765 IPR006305 Flagellar biosynthesis protein FliQ JHS88_23765 IPR002191 Bacterial export protein family 3 JHS88_23770 IPR005837 Flagellar transport protein FliP JHS88_23770 IPR005838 Type III secretion system inner membrane P protein JHS88_23775 IPR036429 SpoA-like superfamily JHS88_23775 IPR001543 Surface presentation of antigen (SpoA) JHS88_23775 IPR012826 Flagellar motor switch FliN JHS88_23775 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb JHS88_23790 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_23790 IPR002078 RNA polymerase sigma factor 54 interaction domain JHS88_23790 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 JHS88_23790 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 JHS88_23790 IPR025944 Sigma-54 interaction domain, conserved site JHS88_23790 IPR029995 Transcriptional activator SfnR/FlbD JHS88_23790 IPR002197 DNA binding HTH domain, Fis-type JHS88_23790 IPR009057 Homeobox-like domain superfamily JHS88_23790 IPR011006 CheY-like superfamily JHS88_23790 IPR003593 AAA+ ATPase domain JHS88_23790 IPR001789 Signal transduction response regulator, receiver domain JHS88_23795 IPR001624 Flagellar hook-basal body complex protein FliE JHS88_23800 IPR000067 Flagellar M-ring protein FliF JHS88_23800 IPR006182 Secretory protein YscJ/FliF JHS88_23800 IPR013556 Flagellar M-ring C-terminal JHS88_23805 IPR000090 Flagellar motor switch protein FliG JHS88_23805 IPR011002 Flagellar motor switch protein FliG, alpha-helical JHS88_23805 IPR032779 Flagellar motor switch protein FliG, middle domain JHS88_23805 IPR028263 Flagellar motor switch protein FliG, N-terminal domain JHS88_23805 IPR023087 Flagellar motor switch protein FliG, C-terminal JHS88_23815 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_23815 IPR003593 AAA+ ATPase domain JHS88_23815 IPR040627 T3SS EscN ATPase, C-terminal JHS88_23815 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain JHS88_23815 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site JHS88_23815 IPR005714 ATPase, type III secretion system, FliI/YscN JHS88_23815 IPR032463 ATPase, type III secretion system, FliI JHS88_23815 IPR020005 Flagellar export ATPase FliI, clade 1 JHS88_23830 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_23830 IPR005119 LysR, substrate-binding JHS88_23830 IPR036390 Winged helix DNA-binding domain superfamily JHS88_23830 IPR000847 Transcription regulator HTH, LysR JHS88_23845 IPR023710 Probable phosphatase YcdX JHS88_23845 IPR003141 Polymerase/histidinol phosphatase, N-terminal JHS88_23845 IPR016195 Polymerase/histidinol phosphatase-like JHS88_23865 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase JHS88_23865 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain JHS88_23865 IPR037523 Vicinal oxygen chelate (VOC) domain JHS88_23865 IPR037478 YwkD-like domain JHS88_23870 IPR005119 LysR, substrate-binding JHS88_23870 IPR000847 Transcription regulator HTH, LysR JHS88_23870 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_23870 IPR036390 Winged helix DNA-binding domain superfamily JHS88_23890 IPR039420 Transcriptional regulatory protein WalR-like JHS88_23890 IPR001789 Signal transduction response regulator, receiver domain JHS88_23890 IPR016032 Signal transduction response regulator, C-terminal effector JHS88_23890 IPR001867 OmpR/PhoB-type DNA-binding domain JHS88_23890 IPR011006 CheY-like superfamily JHS88_23890 IPR036388 Winged helix-like DNA-binding domain superfamily JHS88_23895 IPR001789 Signal transduction response regulator, receiver domain JHS88_23895 IPR011006 CheY-like superfamily JHS88_23895 IPR003594 Histidine kinase/HSP90-like ATPase JHS88_23895 IPR036890 Histidine kinase/HSP90-like ATPase superfamily JHS88_23895 IPR005467 Histidine kinase domain JHS88_23895 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain JHS88_23895 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily JHS88_23895 IPR001610 PAC motif JHS88_23895 IPR000700 PAS-associated, C-terminal JHS88_23895 IPR035965 PAS domain superfamily JHS88_23895 IPR013656 PAS fold-4 JHS88_23895 IPR004358 Signal transduction histidine kinase-related protein, C-terminal JHS88_23895 IPR000014 PAS domain JHS88_23900 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily JHS88_23900 IPR018152 Superoxide dismutase, copper/zinc, binding site JHS88_23900 IPR001424 Superoxide dismutase, copper/zinc binding domain JHS88_23900 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone JHS88_23905 IPR000192 Aminotransferase class V domain JHS88_23905 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site JHS88_23905 IPR015424 Pyridoxal phosphate-dependent transferase JHS88_23905 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JHS88_23905 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JHS88_23910 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF JHS88_23910 IPR001320 Ionotropic glutamate receptor JHS88_23910 IPR018313 Solute-binding protein family 3, conserved site JHS88_23915 IPR001633 EAL domain JHS88_23915 IPR035919 EAL domain superfamily JHS88_23915 IPR000160 GGDEF domain JHS88_23915 IPR005330 MHYT domain JHS88_23915 IPR029787 Nucleotide cyclase JHS88_23920 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JHS88_23920 IPR015424 Pyridoxal phosphate-dependent transferase JHS88_23920 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JHS88_23920 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site JHS88_23920 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase JHS88_23920 IPR004839 Aminotransferase, class I/classII JHS88_23925 IPR020843 Polyketide synthase, enoylreductase domain JHS88_23925 IPR036291 NAD(P)-binding domain superfamily JHS88_23925 IPR004627 L-threonine 3-dehydrogenase JHS88_23925 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site JHS88_23925 IPR013154 Alcohol dehydrogenase, N-terminal JHS88_23925 IPR013149 Alcohol dehydrogenase, C-terminal JHS88_23925 IPR011032 GroES-like superfamily JHS88_23965 IPR003593 AAA+ ATPase domain JHS88_23965 IPR036733 B transposition protein, C-terminal domain superfamily JHS88_23965 IPR001387 Cro/C1-type helix-turn-helix domain JHS88_23965 IPR010982 Lambda repressor-like, DNA-binding domain superfamily JHS88_23965 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_23965 IPR009084 B transposition protein, C-terminal JHS88_23990 IPR007358 Nucleoid-associated protein NdpA JHS88_24015 IPR032710 NTF2-like domain superfamily JHS88_24015 IPR004027 SEC-C motif JHS88_24015 IPR023006 Uncharacterised protein family UPF0225 JHS88_24185 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase JHS88_24185 IPR001091 Restriction/modification DNA-methylase JHS88_24185 IPR002052 DNA methylase, N-6 adenine-specific, conserved site JHS88_24185 IPR002941 DNA methylase N-4/N-6 JHS88_24230 IPR006665 OmpA-like domain JHS88_24230 IPR006690 Outer membrane protein, OmpA-like, conserved site JHS88_24230 IPR036737 OmpA-like domain superfamily JHS88_24280 IPR002686 Transposase IS200-like JHS88_24280 IPR036515 Transposase IS200-like superfamily JHS88_24295 IPR014737 Transposase, Tn5-like, C-terminal JHS88_24295 IPR012337 Ribonuclease H-like superfamily JHS88_24295 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily JHS88_24295 IPR002559 Transposase, IS4-like JHS88_24295 IPR014735 Transposase, Tn5-like, N-terminal JHS88_24295 IPR014736 Transposase, Tn5-like, core JHS88_24295 IPR003201 Transposase Tn5, dimerisation JHS88_24380 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily JHS88_24380 IPR006119 Resolvase, N-terminal catalytic domain JHS88_24380 IPR006120 Resolvase, HTH domain JHS88_24380 IPR006118 Recombinase, conserved site JHS88_24410 IPR013610 Domain of unknown function DUF1738 JHS88_24410 IPR041459 Polyvalent protein, metallopeptidase domain JHS88_24410 IPR034154 Archaeal primase DnaG/twinkle, TOPRIM domain JHS88_24410 IPR006171 TOPRIM domain JHS88_24420 IPR004914 Antirestriction protein JHS88_24420 IPR042297 Antirestriction domain superfamily JHS88_24440 IPR003601 DNA topoisomerase, type IA, domain 2 JHS88_24440 IPR023406 DNA topoisomerase, type IA, active site JHS88_24440 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 JHS88_24440 IPR013497 DNA topoisomerase, type IA, central JHS88_24440 IPR034144 DNA topoisomerase 3-like, TOPRIM domain JHS88_24440 IPR006171 TOPRIM domain JHS88_24440 IPR005738 DNA topoisomerase III JHS88_24440 IPR000380 DNA topoisomerase, type IA JHS88_24440 IPR023405 DNA topoisomerase, type IA, core domain JHS88_24440 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 JHS88_24440 IPR003602 DNA topoisomerase, type IA, DNA-binding domain JHS88_24440 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 JHS88_24490 IPR023346 Lysozyme-like domain superfamily JHS88_24490 IPR008258 Transglycosylase SLT domain 1 JHS88_24510 IPR018084 Hok/gef cell toxic protein, conserved site JHS88_24510 IPR000021 Hok/gef cell toxic protein JHS88_24550 IPR001482 Type II/IV secretion system protein JHS88_24550 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_24580 IPR042217 Type IV secretion system, VirB10/TrbI JHS88_24580 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI JHS88_24590 IPR010258 Conjugal transfer, TrbG/VirB9/CagX JHS88_24590 IPR014142 P-type conjugative transfer protein TrbG JHS88_24590 IPR033645 VirB9/CagX/TrbG, C-terminal JHS88_24590 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily JHS88_24610 IPR014149 Conjugative transfer, TrbB JHS88_24610 IPR001482 Type II/IV secretion system protein JHS88_24610 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_24620 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_24620 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain JHS88_24620 IPR004346 CagE, TrbE, VirB component of type IV transporter system JHS88_24620 IPR003593 AAA+ ATPase domain JHS88_24625 IPR016704 Conjugal transfer, TrbD JHS88_24625 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB JHS88_24630 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 JHS88_24655 IPR026041 Glyoxalase ElbB JHS88_24655 IPR029062 Class I glutamine amidotransferase-like JHS88_24670 IPR010106 Recombination-promoting nuclease RpnA JHS88_24670 IPR006842 Transposase (putative), YhgA-like JHS88_24675 IPR025669 AAA domain JHS88_24675 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_24690 IPR006120 Resolvase, HTH domain JHS88_24690 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily JHS88_24690 IPR006119 Resolvase, N-terminal catalytic domain JHS88_24690 IPR006118 Recombinase, conserved site JHS88_24690 IPR009057 Homeobox-like domain superfamily JHS88_24750 IPR034144 DNA topoisomerase 3-like, TOPRIM domain JHS88_24750 IPR006171 TOPRIM domain JHS88_24750 IPR000380 DNA topoisomerase, type IA JHS88_24750 IPR023405 DNA topoisomerase, type IA, core domain JHS88_24750 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 JHS88_24750 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 JHS88_24750 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 JHS88_24750 IPR013497 DNA topoisomerase, type IA, central JHS88_24750 IPR023406 DNA topoisomerase, type IA, active site JHS88_24750 IPR003601 DNA topoisomerase, type IA, domain 2 JHS88_24750 IPR003602 DNA topoisomerase, type IA, DNA-binding domain JHS88_24750 IPR005738 DNA topoisomerase III JHS88_24790 IPR014158 Type IV secretion system, VirB5 JHS88_24790 IPR023220 Type IV secretion system, VirB5-domain JHS88_24795 IPR007688 Plasmid conjugal transfer TrbL/VirB6 JHS88_24875 IPR006664 Outer membrane protein, bacterial JHS88_24875 IPR002368 Outer membrane protein, OmpA JHS88_24875 IPR006665 OmpA-like domain JHS88_24875 IPR006690 Outer membrane protein, OmpA-like, conserved site JHS88_24875 IPR036737 OmpA-like domain superfamily JHS88_24875 IPR000498 Outer membrane protein OmpA-like, transmembrane domain JHS88_24875 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel JHS88_24880 IPR021884 Ice-binding protein-like JHS88_24880 IPR003343 Bacterial Ig-like, group 2 JHS88_24880 IPR008964 Invasin/intimin cell-adhesion fragments JHS88_24905 IPR003346 Transposase, IS116/IS110/IS902 JHS88_24905 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal JHS88_24920 IPR004839 Aminotransferase, class I/classII JHS88_24920 IPR027619 Putative C-S lyase JHS88_24920 IPR015424 Pyridoxal phosphate-dependent transferase JHS88_24920 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JHS88_24920 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JHS88_24925 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal JHS88_24925 IPR004770 Na+/H+ antiporter NhaC JHS88_24930 IPR028082 Periplasmic binding protein-like I JHS88_24930 IPR000843 LacI-type HTH domain JHS88_24930 IPR010982 Lambda repressor-like, DNA-binding domain superfamily JHS88_24945 IPR009057 Homeobox-like domain superfamily JHS88_24945 IPR006120 Resolvase, HTH domain JHS88_24945 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily JHS88_24945 IPR006119 Resolvase, N-terminal catalytic domain JHS88_24945 IPR006118 Recombinase, conserved site JHS88_24955 IPR006118 Recombinase, conserved site JHS88_24955 IPR006120 Resolvase, HTH domain JHS88_24955 IPR009057 Homeobox-like domain superfamily JHS88_24955 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily JHS88_24955 IPR006119 Resolvase, N-terminal catalytic domain JHS88_24975 IPR036397 Ribonuclease H superfamily JHS88_24975 IPR032874 DDE domain JHS88_24975 IPR012337 Ribonuclease H-like superfamily JHS88_24975 IPR001584 Integrase, catalytic core JHS88_24985 IPR009614 Toxin YoeB JHS88_24985 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily JHS88_24990 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM JHS88_24990 IPR036165 YefM-like superfamily JHS88_25000 IPR002513 Tn3 transposase DDE domain JHS88_25000 IPR025296 Domain of unknown function DUF4158 JHS88_25005 IPR006118 Recombinase, conserved site JHS88_25005 IPR006120 Resolvase, HTH domain JHS88_25005 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily JHS88_25005 IPR006119 Resolvase, N-terminal catalytic domain JHS88_25060 IPR001387 Cro/C1-type helix-turn-helix domain JHS88_25060 IPR010982 Lambda repressor-like, DNA-binding domain superfamily JHS88_25080 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 JHS88_25085 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB JHS88_25090 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain JHS88_25090 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_25090 IPR004346 CagE, TrbE, VirB component of type IV transporter system JHS88_25095 IPR026264 Type IV secretion system protein VirB8/PtlE JHS88_25095 IPR007430 Bacterial virulence protein VirB8 JHS88_25095 IPR032710 NTF2-like domain superfamily JHS88_25100 IPR014148 P-type conjugative transfer protein VirB9 JHS88_25100 IPR010258 Conjugal transfer, TrbG/VirB9/CagX JHS88_25100 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily JHS88_25100 IPR033645 VirB9/CagX/TrbG, C-terminal JHS88_25115 IPR025668 Transposase DDE domain JHS88_25120 IPR025668 Transposase DDE domain JHS88_25125 IPR005015 Thermostable direct haemolysin, vibrio JHS88_25125 IPR038689 Thermostable direct haemolysin superfamily JHS88_25130 IPR009057 Homeobox-like domain superfamily JHS88_25130 IPR018060 DNA binding HTH domain, AraC-type JHS88_25130 IPR020449 Transcription regulator HTH, AraC- type JHS88_25130 IPR018062 HTH domain AraC-type, conserved site JHS88_25135 IPR003593 AAA+ ATPase domain JHS88_25135 IPR003439 ABC transporter-like JHS88_25135 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_25140 IPR003439 ABC transporter-like JHS88_25140 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal JHS88_25140 IPR017871 ABC transporter, conserved site JHS88_25140 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_25140 IPR003593 AAA+ ATPase domain JHS88_25145 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JHS88_25145 IPR025966 Oligopeptide transport permease C-like, N-terminal domain JHS88_25145 IPR035906 MetI-like superfamily JHS88_25150 IPR035906 MetI-like superfamily JHS88_25150 IPR000515 ABC transporter type 1, transmembrane domain MetI-like JHS88_25155 IPR039424 Solute-binding protein family 5 JHS88_25155 IPR023765 Solute-binding protein family 5, conserved site JHS88_25155 IPR000914 Solute-binding protein family 5 domain JHS88_25155 IPR030678 Peptide/nickel binding protein, MppA-type JHS88_25160 IPR002669 Urease accessory protein UreD JHS88_25165 IPR002026 Urease, gamma/gamma-beta subunit JHS88_25165 IPR036463 Urease, gamma subunit superfamily JHS88_25165 IPR012010 Urease, gamma subunit JHS88_25170 IPR002019 Urease, beta subunit JHS88_25170 IPR036461 Urease, beta subunit superfamily JHS88_25175 IPR032466 Metal-dependent hydrolase JHS88_25175 IPR017951 Urease alpha subunit, C-terminal JHS88_25175 IPR005848 Urease, alpha subunit JHS88_25175 IPR011612 Urease alpha-subunit, N-terminal domain JHS88_25175 IPR011059 Metal-dependent hydrolase, composite domain superfamily JHS88_25175 IPR006680 Amidohydrolase-related JHS88_25175 IPR017950 Urease active site JHS88_25175 IPR029754 Urease nickel binding site JHS88_25180 IPR007864 Urease accessory protein UreE, C-terminal domain JHS88_25180 IPR004029 UreE urease accessory, N-terminal JHS88_25180 IPR036118 UreE urease accessory, N-terminal domain superfamily JHS88_25180 IPR036675 UreE, C-terminal domain superfamily JHS88_25180 IPR012406 Urease accessory protein UreE JHS88_25185 IPR038277 UreF domain superfamily JHS88_25185 IPR002639 Urease accessory protein UreF JHS88_25190 IPR003495 CobW/HypB/UreG, nucleotide-binding domain JHS88_25190 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_25190 IPR004400 Urease accessory protein UreG JHS88_25205 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily JHS88_25205 IPR006120 Resolvase, HTH domain JHS88_25205 IPR006118 Recombinase, conserved site JHS88_25205 IPR006119 Resolvase, N-terminal catalytic domain JHS88_25210 IPR002513 Tn3 transposase DDE domain JHS88_25210 IPR025296 Domain of unknown function DUF4158 JHS88_25220 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM JHS88_25220 IPR036165 YefM-like superfamily JHS88_25225 IPR009614 Toxin YoeB JHS88_25225 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily JHS88_25235 IPR036397 Ribonuclease H superfamily JHS88_25235 IPR012337 Ribonuclease H-like superfamily JHS88_25235 IPR001584 Integrase, catalytic core JHS88_25235 IPR032874 DDE domain JHS88_25255 IPR006120 Resolvase, HTH domain JHS88_25255 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily JHS88_25255 IPR006119 Resolvase, N-terminal catalytic domain JHS88_25255 IPR006118 Recombinase, conserved site JHS88_25255 IPR009057 Homeobox-like domain superfamily JHS88_25265 IPR009057 Homeobox-like domain superfamily JHS88_25265 IPR006118 Recombinase, conserved site JHS88_25265 IPR006119 Resolvase, N-terminal catalytic domain JHS88_25265 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily JHS88_25265 IPR006120 Resolvase, HTH domain JHS88_25280 IPR028082 Periplasmic binding protein-like I JHS88_25280 IPR010982 Lambda repressor-like, DNA-binding domain superfamily JHS88_25280 IPR000843 LacI-type HTH domain JHS88_25285 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal JHS88_25285 IPR004770 Na+/H+ antiporter NhaC JHS88_25290 IPR004839 Aminotransferase, class I/classII JHS88_25290 IPR027619 Putative C-S lyase JHS88_25290 IPR015424 Pyridoxal phosphate-dependent transferase JHS88_25290 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 JHS88_25290 IPR015421 Pyridoxal phosphate-dependent transferase, major domain JHS88_25305 IPR003346 Transposase, IS116/IS110/IS902 JHS88_25305 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal JHS88_25330 IPR003343 Bacterial Ig-like, group 2 JHS88_25330 IPR021884 Ice-binding protein-like JHS88_25330 IPR008964 Invasin/intimin cell-adhesion fragments JHS88_25335 IPR006664 Outer membrane protein, bacterial JHS88_25335 IPR002368 Outer membrane protein, OmpA JHS88_25335 IPR006665 OmpA-like domain JHS88_25335 IPR006690 Outer membrane protein, OmpA-like, conserved site JHS88_25335 IPR036737 OmpA-like domain superfamily JHS88_25335 IPR000498 Outer membrane protein OmpA-like, transmembrane domain JHS88_25335 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel JHS88_25415 IPR007688 Plasmid conjugal transfer TrbL/VirB6 JHS88_25420 IPR014158 Type IV secretion system, VirB5 JHS88_25420 IPR023220 Type IV secretion system, VirB5-domain JHS88_25460 IPR013497 DNA topoisomerase, type IA, central JHS88_25460 IPR003602 DNA topoisomerase, type IA, DNA-binding domain JHS88_25460 IPR005738 DNA topoisomerase III JHS88_25460 IPR006171 TOPRIM domain JHS88_25460 IPR034144 DNA topoisomerase 3-like, TOPRIM domain JHS88_25460 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 JHS88_25460 IPR023406 DNA topoisomerase, type IA, active site JHS88_25460 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 JHS88_25460 IPR023405 DNA topoisomerase, type IA, core domain JHS88_25460 IPR000380 DNA topoisomerase, type IA JHS88_25460 IPR003601 DNA topoisomerase, type IA, domain 2 JHS88_25460 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 JHS88_25470 IPR003688 Type IV secretion system protein TraG/VirD4 JHS88_25470 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_25480 IPR014155 Type IV secretion system protein VirB11 JHS88_25480 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_25480 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 JHS88_25480 IPR001482 Type II/IV secretion system protein JHS88_25485 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI JHS88_25485 IPR042217 Type IV secretion system, VirB10/TrbI JHS88_25490 IPR010258 Conjugal transfer, TrbG/VirB9/CagX JHS88_25490 IPR014148 P-type conjugative transfer protein VirB9 JHS88_25490 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily JHS88_25490 IPR033645 VirB9/CagX/TrbG, C-terminal JHS88_25495 IPR032710 NTF2-like domain superfamily JHS88_25495 IPR007430 Bacterial virulence protein VirB8 JHS88_25495 IPR026264 Type IV secretion system protein VirB8/PtlE JHS88_25500 IPR004346 CagE, TrbE, VirB component of type IV transporter system JHS88_25500 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain JHS88_25500 IPR027417 P-loop containing nucleoside triphosphate hydrolase JHS88_25505 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB JHS88_25510 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 JHS88_25530 IPR001387 Cro/C1-type helix-turn-helix domain JHS88_25530 IPR010982 Lambda repressor-like, DNA-binding domain superfamily