locus-tag class description H5404_00035 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_00035 IPR017871 ABC transporter, conserved site H5404_00035 IPR003439 ABC transporter-like H5404_00035 IPR003593 AAA+ ATPase domain H5404_00040 IPR037294 ABC transporter, BtuC-like H5404_00040 IPR000522 ABC transporter, permease protein, BtuC-like H5404_00045 IPR037294 ABC transporter, BtuC-like H5404_00045 IPR000522 ABC transporter, permease protein, BtuC-like H5404_00050 IPR002491 ABC transporter periplasmic binding domain H5404_00055 IPR010916 TonB box, conserved site H5404_00055 IPR011662 Secretin/TonB, short N-terminal domain H5404_00055 IPR000531 TonB-dependent receptor-like, beta-barrel H5404_00055 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily H5404_00055 IPR037066 TonB-dependent receptor, plug domain superfamily H5404_00055 IPR010917 TonB-dependent receptor, conserved site H5404_00055 IPR012910 TonB-dependent receptor, plug domain H5404_00055 IPR010105 TonB-dependent siderophore receptor H5404_00060 IPR010105 TonB-dependent siderophore receptor H5404_00060 IPR037066 TonB-dependent receptor, plug domain superfamily H5404_00060 IPR000531 TonB-dependent receptor-like, beta-barrel H5404_00060 IPR012910 TonB-dependent receptor, plug domain H5404_00060 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily H5404_00060 IPR039423 TonB-dependent receptor-like H5404_00065 IPR003806 ATP-grasp fold, PylC-type H5404_00065 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain H5404_00065 IPR024083 Fumarase/histidase, N-terminal H5404_00065 IPR022761 Fumarate lyase, N-terminal H5404_00065 IPR008948 L-Aspartase-like H5404_00065 IPR011761 ATP-grasp fold H5404_00065 IPR009049 Argininosuccinate lyase H5404_00065 IPR000362 Fumarate lyase family H5404_00070 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like H5404_00070 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal H5404_00070 IPR022770 Ferric iron reductase FhuF domain H5404_00080 IPR022770 Ferric iron reductase FhuF domain H5404_00080 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal H5404_00080 IPR037455 Aerobactin siderophore biosynthesis, IucA/IucC-like H5404_00085 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal H5404_00085 IPR029066 PLP-binding barrel H5404_00085 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal H5404_00085 IPR022272 Lipocalin family conserved site H5404_00085 IPR000183 Ornithine/DAP/Arg decarboxylase H5404_00085 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal H5404_00085 IPR002433 Ornithine decarboxylase H5404_00090 IPR006059 Bacterial extracellular solute-binding protein H5404_00095 IPR003594 Histidine kinase/HSP90-like ATPase H5404_00095 IPR003660 HAMP domain H5404_00095 IPR004358 Signal transduction histidine kinase-related protein, C-terminal H5404_00095 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily H5404_00095 IPR013727 Two-component sensor kinase, N-terminal H5404_00095 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain H5404_00095 IPR005467 Histidine kinase domain H5404_00095 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_00100 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_00100 IPR039420 Transcriptional regulatory protein WalR-like H5404_00100 IPR011006 CheY-like superfamily H5404_00100 IPR001789 Signal transduction response regulator, receiver domain H5404_00100 IPR016032 Signal transduction response regulator, C-terminal effector H5404_00100 IPR001867 OmpR/PhoB-type DNA-binding domain H5404_00105 IPR011299 PTS system glucose-specific IIBC component H5404_00105 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component H5404_00105 IPR036878 Glucose permease domain IIB H5404_00105 IPR001996 Phosphotransferase system, IIB component, type 1 H5404_00105 IPR003352 Phosphotransferase system, EIIC H5404_00105 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site H5404_00105 IPR013013 Phosphotransferase system, EIIC component, type 1 H5404_00115 IPR009000 Translation protein, beta-barrel domain superfamily H5404_00115 IPR001539 Peptidase U32 H5404_00120 IPR001851 ABC transporter, permease H5404_00125 IPR017917 ABC transporter, arabinose import, ATP-binding protein, AraG H5404_00125 IPR003593 AAA+ ATPase domain H5404_00125 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_00125 IPR003439 ABC transporter-like H5404_00125 IPR017871 ABC transporter, conserved site H5404_00130 IPR026266 L-arabinose-binding periplasmic protein H5404_00130 IPR001761 Periplasmic binding protein/LacI sugar binding domain H5404_00130 IPR028082 Periplasmic binding protein-like I H5404_00135 IPR018484 Carbohydrate kinase, FGGY, N-terminal H5404_00135 IPR018485 Carbohydrate kinase, FGGY, C-terminal H5404_00135 IPR005929 Ribulokinase H5404_00135 IPR000577 Carbohydrate kinase, FGGY H5404_00140 IPR036409 Class II aldolase/adducin N-terminal domain superfamily H5404_00140 IPR001303 Class II aldolase/adducin N-terminal H5404_00140 IPR023499 L-ribulose-5-phosphate 4-epimerase UlaF H5404_00145 IPR004216 L-fucose/L-arabinose isomerase, C-terminal H5404_00145 IPR024664 L-arabinose isomerase, C-terminal H5404_00145 IPR038583 L-arabinose isomerase, N-terminal domain superfamily H5404_00145 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily H5404_00145 IPR003762 L-arabinose isomerase H5404_00155 IPR003313 AraC-type arabinose-binding/dimerisation domain H5404_00155 IPR037923 Transcription regulator HTH-like H5404_00155 IPR009057 Homeobox-like domain superfamily H5404_00155 IPR018060 DNA binding HTH domain, AraC-type H5404_00155 IPR018062 HTH domain AraC-type, conserved site H5404_00155 IPR020449 Transcription regulator HTH, AraC- type H5404_00170 IPR036102 OsmC/Ohr superfamily H5404_00170 IPR019953 Organic hydroperoxide resistance protein famiy H5404_00170 IPR003718 OsmC/Ohr family H5404_00170 IPR015946 K homology domain-like, alpha/beta H5404_00175 IPR000835 MarR-type HTH domain H5404_00175 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_00175 IPR036390 Winged helix DNA-binding domain superfamily H5404_00180 IPR024706 Peroxiredoxin, AhpC-type H5404_00180 IPR036249 Thioredoxin-like superfamily H5404_00180 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant H5404_00180 IPR017559 Alkyl hydroperoxide reductase subunit C H5404_00180 IPR019479 Peroxiredoxin, C-terminal H5404_00180 IPR013766 Thioredoxin domain H5404_00185 IPR036188 FAD/NAD(P)-binding domain superfamily H5404_00185 IPR012336 Thioredoxin-like fold H5404_00185 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site H5404_00185 IPR002109 Glutaredoxin H5404_00185 IPR023753 FAD/NAD(P)-binding domain H5404_00185 IPR012081 Alkyl hydroperoxide reductase subunit F H5404_00185 IPR036249 Thioredoxin-like superfamily H5404_00210 IPR036390 Winged helix DNA-binding domain superfamily H5404_00210 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_00210 IPR000847 Transcription regulator HTH, LysR H5404_00210 IPR005119 LysR, substrate-binding H5404_00215 IPR018060 DNA binding HTH domain, AraC-type H5404_00215 IPR029062 Class I glutamine amidotransferase-like H5404_00215 IPR002818 DJ-1/PfpI H5404_00215 IPR009057 Homeobox-like domain superfamily H5404_00215 IPR018062 HTH domain AraC-type, conserved site H5404_00220 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_00220 IPR013324 RNA polymerase sigma factor, region 3/4-like H5404_00220 IPR039425 RNA polymerase sigma-70 like H5404_00220 IPR014284 RNA polymerase sigma-70 like domain H5404_00220 IPR013325 RNA polymerase sigma factor, region 2 H5404_00220 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 H5404_00220 IPR007627 RNA polymerase sigma-70 region 2 H5404_00230 IPR000727 Target SNARE coiled-coil homology domain H5404_00230 IPR029151 Periplasmic sensor-like domain superfamily H5404_00230 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain H5404_00230 IPR033479 Double Cache domain 1 H5404_00230 IPR003660 HAMP domain H5404_00230 IPR004090 Chemotaxis methyl-accepting receptor H5404_00235 IPR005119 LysR, substrate-binding H5404_00235 IPR011781 D-serine deaminase transcriptional activator H5404_00235 IPR036390 Winged helix DNA-binding domain superfamily H5404_00235 IPR000847 Transcription regulator HTH, LysR H5404_00235 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_00240 IPR022616 Glycosyl hydrolase, family 4, C-terminal H5404_00240 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal H5404_00240 IPR036291 NAD(P)-binding domain superfamily H5404_00240 IPR001088 Glycoside hydrolase, family 4 H5404_00240 IPR019802 Glycoside hydrolase, family 4, conserved site H5404_00255 IPR005302 Molybdenum cofactor sulfurase, C-terminal H5404_00255 IPR011037 Pyruvate kinase-like, insert domain superfamily H5404_00255 IPR005163 3-alpha domain H5404_00260 IPR011545 DEAD/DEAH box helicase domain H5404_00260 IPR014014 RNA helicase, DEAD-box type, Q motif H5404_00260 IPR028622 ATP-dependent RNA helicase RhlE H5404_00260 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site H5404_00260 IPR001650 Helicase, C-terminal H5404_00260 IPR014001 Helicase superfamily 1/2, ATP-binding domain H5404_00260 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_00275 IPR009594 Transcription regulator HTH, AraC, N-terminal H5404_00275 IPR009057 Homeobox-like domain superfamily H5404_00275 IPR018060 DNA binding HTH domain, AraC-type H5404_00285 IPR003439 ABC transporter-like H5404_00285 IPR003593 AAA+ ATPase domain H5404_00285 IPR017871 ABC transporter, conserved site H5404_00285 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_00285 IPR039421 Type I protein exporter H5404_00285 IPR036640 ABC transporter type 1, transmembrane domain superfamily H5404_00285 IPR011527 ABC transporter type 1, transmembrane domain H5404_00295 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_00295 IPR019885 Transcription regulator HTH, AsnC-type, conserved site H5404_00295 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain H5404_00295 IPR019888 Transcription regulator AsnC-type H5404_00295 IPR000485 AsnC-type HTH domain H5404_00295 IPR011991 ArsR-like helix-turn-helix domain H5404_00295 IPR011008 Dimeric alpha-beta barrel H5404_00295 IPR036390 Winged helix DNA-binding domain superfamily H5404_00330 IPR001734 Sodium/solute symporter H5404_00330 IPR018212 Sodium/solute symporter, conserved site H5404_00330 IPR038377 Sodium/glucose symporter superfamily H5404_00330 IPR011851 Sodium/proline symporter H5404_00340 IPR016163 Aldehyde dehydrogenase, C-terminal H5404_00340 IPR016161 Aldehyde/histidinol dehydrogenase H5404_00340 IPR029510 Aldehyde dehydrogenase, glutamic acid active site H5404_00340 IPR016160 Aldehyde dehydrogenase, cysteine active site H5404_00340 IPR016162 Aldehyde dehydrogenase, N-terminal H5404_00340 IPR025703 Bifunctional protein PutA H5404_00340 IPR013321 Arc-type ribbon-helix-helix H5404_00340 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 H5404_00340 IPR029041 FAD-linked oxidoreductase-like H5404_00340 IPR041349 Proline utilization A proline dehydrogenase N-terminal domain H5404_00340 IPR015590 Aldehyde dehydrogenase domain H5404_00340 IPR010985 Ribbon-helix-helix H5404_00340 IPR024090 Proline dehydrogenase PutA, domain I H5404_00340 IPR024089 Proline dehydrogenase PutA, domain I/II H5404_00340 IPR024082 Proline dehydrogenase PutA, domain II H5404_00340 IPR002872 Proline dehydrogenase domain H5404_00345 IPR009057 Homeobox-like domain superfamily H5404_00345 IPR018060 DNA binding HTH domain, AraC-type H5404_00345 IPR018062 HTH domain AraC-type, conserved site H5404_00345 IPR014710 RmlC-like jelly roll fold H5404_00345 IPR011051 RmlC-like cupin domain superfamily H5404_00345 IPR020449 Transcription regulator HTH, AraC- type H5404_00355 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative H5404_00355 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal H5404_00355 IPR012349 FMN-binding split barrel H5404_00355 IPR000659 Pyridoxamine 5'-phosphate oxidase H5404_00355 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site H5404_00365 IPR004358 Signal transduction histidine kinase-related protein, C-terminal H5404_00365 IPR033479 Double Cache domain 1 H5404_00365 IPR003594 Histidine kinase/HSP90-like ATPase H5404_00365 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) H5404_00365 IPR029151 Periplasmic sensor-like domain superfamily H5404_00365 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily H5404_00365 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_00365 IPR005467 Histidine kinase domain H5404_00365 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain H5404_00370 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 H5404_00370 IPR003593 AAA+ ATPase domain H5404_00370 IPR009057 Homeobox-like domain superfamily H5404_00370 IPR001789 Signal transduction response regulator, receiver domain H5404_00370 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_00370 IPR011006 CheY-like superfamily H5404_00370 IPR002078 RNA polymerase sigma factor 54 interaction domain H5404_00370 IPR002197 DNA binding HTH domain, Fis-type H5404_00370 IPR025944 Sigma-54 interaction domain, conserved site H5404_00370 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 H5404_00375 IPR010129 Type I secretion membrane fusion protein, HlyD family H5404_00375 IPR006144 Secretion protein HlyD, conserved site H5404_00390 IPR039421 Type I protein exporter H5404_00390 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_00390 IPR010132 ATPase, type I secretion system, HlyB H5404_00390 IPR017871 ABC transporter, conserved site H5404_00390 IPR003439 ABC transporter-like H5404_00390 IPR036640 ABC transporter type 1, transmembrane domain superfamily H5404_00390 IPR011527 ABC transporter type 1, transmembrane domain H5404_00390 IPR005074 Peptidase C39, bacteriocin processing H5404_00390 IPR039395 Peptidase C39-like A H5404_00390 IPR003593 AAA+ ATPase domain H5404_00400 IPR008254 Flavodoxin/nitric oxide synthase H5404_00400 IPR037513 NAD(P)H dehydrogenase (quinone), prokaryotic H5404_00400 IPR005025 NADPH-dependent FMN reductase-like H5404_00400 IPR010089 Flavoprotein WrbA-like H5404_00400 IPR029039 Flavoprotein-like superfamily H5404_00405 IPR030678 Peptide/nickel binding protein, MppA-type H5404_00405 IPR000914 Solute-binding protein family 5 domain H5404_00405 IPR039424 Solute-binding protein family 5 H5404_00405 IPR023765 Solute-binding protein family 5, conserved site H5404_00410 IPR000834 Peptidase M14, carboxypeptidase A H5404_00415 IPR035472 RpiR-like, SIS domain H5404_00415 IPR009057 Homeobox-like domain superfamily H5404_00415 IPR000281 Helix-turn-helix protein RpiR H5404_00415 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_00415 IPR001347 Sugar isomerase (SIS) H5404_00415 IPR022821 Transcription regulator HTH, MurR H5404_00420 IPR001347 Sugar isomerase (SIS) H5404_00420 IPR005486 Glucokinase regulatory protein, conserved site H5404_00420 IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein H5404_00420 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ H5404_00425 IPR013013 Phosphotransferase system, EIIC component, type 1 H5404_00425 IPR003352 Phosphotransferase system, EIIC H5404_00425 IPR001996 Phosphotransferase system, IIB component, type 1 H5404_00425 IPR036878 Glucose permease domain IIB H5404_00425 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site H5404_00430 IPR001897 Porin, gammaproteobacterial H5404_00430 IPR001702 Porin, Gram-negative type H5404_00430 IPR033900 Porin domain, Gram-negative type H5404_00430 IPR023614 Porin domain superfamily H5404_00435 IPR029062 Class I glutamine amidotransferase-like H5404_00435 IPR005320 Peptidase S51 H5404_00440 IPR005119 LysR, substrate-binding H5404_00440 IPR000847 Transcription regulator HTH, LysR H5404_00440 IPR036390 Winged helix DNA-binding domain superfamily H5404_00440 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_00445 IPR018357 Hexapeptide transferase, conserved site H5404_00445 IPR011004 Trimeric LpxA-like superfamily H5404_00445 IPR001451 Hexapeptide repeat H5404_00455 IPR007807 Helicase domain H5404_00455 IPR032672 TmcA/NAT10/Kre33 H5404_00455 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_00455 IPR000182 GNAT domain H5404_00455 IPR016181 Acyl-CoA N-acyltransferase H5404_00455 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA H5404_00460 IPR036086 ParB/Sulfiredoxin superfamily H5404_00460 IPR014884 ParB protein family, C-terminal H5404_00460 IPR003115 ParB/Sulfiredoxin H5404_00460 IPR004437 ParB/RepB/Spo0J partition protein H5404_00465 IPR041250 ParA helix turn helix domain H5404_00465 IPR025669 AAA domain H5404_00465 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_00480 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_00480 IPR017871 ABC transporter, conserved site H5404_00480 IPR003439 ABC transporter-like H5404_00480 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal H5404_00480 IPR003593 AAA+ ATPase domain H5404_00485 IPR003593 AAA+ ATPase domain H5404_00485 IPR003439 ABC transporter-like H5404_00485 IPR017871 ABC transporter, conserved site H5404_00485 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal H5404_00485 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_00495 IPR037238 YbiA-like superfamily H5404_00495 IPR036144 RibA-like superfamily H5404_00495 IPR000926 GTP cyclohydrolase II, RibA H5404_00495 IPR012816 NADAR H5404_00495 IPR032677 GTP cyclohydrolase II H5404_00505 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily H5404_00505 IPR005467 Histidine kinase domain H5404_00505 IPR003594 Histidine kinase/HSP90-like ATPase H5404_00505 IPR003660 HAMP domain H5404_00505 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain H5404_00505 IPR011006 CheY-like superfamily H5404_00505 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_00505 IPR004358 Signal transduction histidine kinase-related protein, C-terminal H5404_00505 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain H5404_00505 IPR036641 HPT domain superfamily H5404_00505 IPR033414 Periplasmic sensor domain H5404_00505 IPR001789 Signal transduction response regulator, receiver domain H5404_00515 IPR029072 YebC-like H5404_00515 IPR026564 Transcriptional regulator TACO1-like, domain 3 H5404_00515 IPR002876 Transcriptional regulator TACO1-like H5404_00515 IPR017856 Integrase-like, N-terminal H5404_00520 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site H5404_00520 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA H5404_00520 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB H5404_00530 IPR015854 ABC transporter, lipoprotein release, LolD H5404_00530 IPR017871 ABC transporter, conserved site H5404_00530 IPR003439 ABC transporter-like H5404_00530 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_00530 IPR011924 Lipoprotein releasing system, ATP-binding protein H5404_00530 IPR003593 AAA+ ATPase domain H5404_00550 IPR003594 Histidine kinase/HSP90-like ATPase H5404_00550 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_00550 IPR010559 Signal transduction histidine kinase, internal region H5404_00550 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region H5404_00550 IPR003018 GAF domain H5404_00555 IPR007492 LytTR DNA-binding domain H5404_00555 IPR001789 Signal transduction response regulator, receiver domain H5404_00555 IPR011006 CheY-like superfamily H5404_00565 IPR029000 Cyclophilin-like domain superfamily H5404_00565 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain H5404_00565 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase H5404_00565 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site H5404_00570 IPR033480 Single Cache domain 2 H5404_00570 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain H5404_00570 IPR003660 HAMP domain H5404_00570 IPR000727 Target SNARE coiled-coil homology domain H5404_00570 IPR004090 Chemotaxis methyl-accepting receptor H5404_00585 IPR001451 Hexapeptide repeat H5404_00585 IPR011004 Trimeric LpxA-like superfamily H5404_00585 IPR018357 Hexapeptide transferase, conserved site H5404_00590 IPR004445 Sodium/glutamate symport carrier protein GltS H5404_00600 IPR003593 AAA+ ATPase domain H5404_00600 IPR003439 ABC transporter-like H5404_00600 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_00605 IPR036390 Winged helix DNA-binding domain superfamily H5404_00605 IPR015424 Pyridoxal phosphate-dependent transferase H5404_00605 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_00605 IPR000524 Transcription regulator HTH, GntR H5404_00605 IPR015421 Pyridoxal phosphate-dependent transferase, major domain H5404_00605 IPR004839 Aminotransferase, class I/classII H5404_00605 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 H5404_00610 IPR004445 Sodium/glutamate symport carrier protein GltS H5404_00620 IPR018321 Glucosamine-6-phosphate isomerase, conserved site H5404_00620 IPR037171 NagB/RpiA transferase-like H5404_00620 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase H5404_00620 IPR004547 Glucosamine-6-phosphate isomerase H5404_00635 IPR036390 Winged helix DNA-binding domain superfamily H5404_00635 IPR005119 LysR, substrate-binding H5404_00635 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_00635 IPR000847 Transcription regulator HTH, LysR H5404_00635 IPR020890 Transcription regulator HTH, HdfR H5404_00640 IPR011051 RmlC-like cupin domain superfamily H5404_00640 IPR014710 RmlC-like jelly roll fold H5404_00640 IPR003829 Pirin, N-terminal domain H5404_00640 IPR012093 Pirin H5404_00640 IPR041602 Quercetin 2,3-dioxygenase, C-terminal cupin domain H5404_00645 IPR032808 DoxX family H5404_00655 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal H5404_00655 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily H5404_00655 IPR003265 HhH-GPD domain H5404_00655 IPR011257 DNA glycosylase H5404_00655 IPR000035 Alkylbase DNA glycosidase, conserved site H5404_00655 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal H5404_00660 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily H5404_00660 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding H5404_00660 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_00660 IPR023546 Methylated-DNA--protein-cysteine methyltransferase H5404_00660 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain H5404_00660 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain H5404_00660 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site H5404_00670 IPR003740 Uncharacterised membrane protein YitT H5404_00680 IPR004680 Citrate transporter-like domain H5404_00680 IPR004672 Na+/H+ antiporter NhaD H5404_00700 IPR013783 Immunoglobulin-like fold H5404_00700 IPR003610 Carbohydrate-binding module family 5/12 H5404_00700 IPR001223 Glycoside hydrolase family 18, catalytic domain H5404_00700 IPR013540 Chitinase A N-terminal H5404_00700 IPR022409 PKD/Chitinase domain H5404_00700 IPR036573 Carbohydrate-binding module superfamily 5/12 H5404_00700 IPR014756 Immunoglobulin E-set H5404_00700 IPR002126 Cadherin-like H5404_00700 IPR029070 Chitinase insertion domain superfamily H5404_00700 IPR011583 Chitinase II H5404_00700 IPR001579 Glycoside hydrolase, chitinase active site H5404_00700 IPR017853 Glycoside hydrolase superfamily H5404_00710 IPR011051 RmlC-like cupin domain superfamily H5404_00710 IPR009664 Pyrimidine/purine nucleoside phosphorylase H5404_00710 IPR014710 RmlC-like jelly roll fold H5404_00720 IPR000160 GGDEF domain H5404_00720 IPR035919 EAL domain superfamily H5404_00720 IPR029787 Nucleotide cyclase H5404_00720 IPR001633 EAL domain H5404_00720 IPR003660 HAMP domain H5404_00725 IPR002528 Multi antimicrobial extrusion protein H5404_00730 IPR006145 Pseudouridine synthase, RsuA/RluA H5404_00730 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site H5404_00730 IPR006225 Pseudouridine synthase, RluC/RluD H5404_00730 IPR020103 Pseudouridine synthase, catalytic domain superfamily H5404_00745 IPR005119 LysR, substrate-binding H5404_00745 IPR000847 Transcription regulator HTH, LysR H5404_00745 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_00745 IPR036390 Winged helix DNA-binding domain superfamily H5404_00750 IPR006379 HAD-superfamily hydrolase, subfamily IIB H5404_00750 IPR023214 HAD superfamily H5404_00750 IPR000150 Cof family H5404_00750 IPR036412 HAD-like superfamily H5404_00760 IPR000160 GGDEF domain H5404_00760 IPR033417 Periplasmic sensor domain CHASE8 H5404_00760 IPR003660 HAMP domain H5404_00760 IPR029787 Nucleotide cyclase H5404_00770 IPR014186 S-formylglutathione hydrolase H5404_00770 IPR000801 Putative esterase H5404_00770 IPR029058 Alpha/Beta hydrolase fold H5404_00775 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site H5404_00775 IPR011032 GroES-like superfamily H5404_00775 IPR013149 Alcohol dehydrogenase, C-terminal H5404_00775 IPR014183 Alcohol dehydrogenase class III H5404_00775 IPR020843 Polyketide synthase, enoylreductase domain H5404_00775 IPR036291 NAD(P)-binding domain superfamily H5404_00775 IPR013154 Alcohol dehydrogenase, N-terminal H5404_00780 IPR001447 Arylamine N-acetyltransferase H5404_00780 IPR038765 Papain-like cysteine peptidase superfamily H5404_00785 IPR005119 LysR, substrate-binding H5404_00785 IPR000847 Transcription regulator HTH, LysR H5404_00785 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_00785 IPR036390 Winged helix DNA-binding domain superfamily H5404_00800 IPR036390 Winged helix DNA-binding domain superfamily H5404_00800 IPR011991 ArsR-like helix-turn-helix domain H5404_00800 IPR005471 Transcription regulator IclR, N-terminal H5404_00800 IPR029016 GAF-like domain superfamily H5404_00800 IPR014757 Transcription regulator IclR, C-terminal H5404_00800 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_00805 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase H5404_00805 IPR002347 Short-chain dehydrogenase/reductase SDR H5404_00805 IPR020904 Short-chain dehydrogenase/reductase, conserved site H5404_00805 IPR036291 NAD(P)-binding domain superfamily H5404_00810 IPR019629 Uncharacterised protein family HI1736/YgjV H5404_00810 IPR026267 Inner membrane protein YgjV H5404_00815 IPR011051 RmlC-like cupin domain superfamily H5404_00815 IPR025499 Pectin degradation protein KdgF H5404_00815 IPR013096 Cupin 2, conserved barrel H5404_00815 IPR014710 RmlC-like jelly roll fold H5404_00830 IPR011611 Carbohydrate kinase PfkB H5404_00830 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site H5404_00830 IPR029056 Ribokinase-like H5404_00835 IPR000887 KDPG/KHG aldolase H5404_00835 IPR013785 Aldolase-type TIM barrel H5404_00835 IPR031338 KDPG/KHG aldolase, active site 2 H5404_00835 IPR031337 KDPG/KHG aldolase, active site 1 H5404_00850 IPR039448 Right handed beta helix domain H5404_00850 IPR012334 Pectin lyase fold H5404_00850 IPR011050 Pectin lyase fold/virulence factor H5404_00855 IPR001734 Sodium/solute symporter H5404_00855 IPR038377 Sodium/glucose symporter superfamily H5404_00855 IPR018212 Sodium/solute symporter, conserved site H5404_00860 IPR015943 WD40/YVTN repeat-like-containing domain superfamily H5404_00860 IPR027946 Oligogalacturonate lyase domain H5404_00865 IPR017938 Riboflavin synthase-like beta-barrel H5404_00865 IPR039374 Siderophore-interacting protein H5404_00865 IPR017927 FAD-binding domain, ferredoxin reductase-type H5404_00865 IPR007037 Siderophore-interacting protein, C-terminal domain H5404_00865 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain H5404_00865 IPR013113 FAD-binding 9, siderophore-interacting H5404_00870 IPR001123 Amino acid exporter protein, LeuE-type H5404_00875 IPR011991 ArsR-like helix-turn-helix domain H5404_00875 IPR000485 AsnC-type HTH domain H5404_00875 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain H5404_00875 IPR019888 Transcription regulator AsnC-type H5404_00875 IPR019885 Transcription regulator HTH, AsnC-type, conserved site H5404_00875 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_00875 IPR036390 Winged helix DNA-binding domain superfamily H5404_00875 IPR011008 Dimeric alpha-beta barrel H5404_00880 IPR004302 Cellulose/chitin-binding protein, N-terminal H5404_00880 IPR014756 Immunoglobulin E-set H5404_00880 IPR041029 N-acetylglucosamine binding protein A domain 2 H5404_00895 IPR001646 Pentapeptide repeat H5404_00900 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel H5404_00900 IPR005618 Outer membrane protein, OmpW H5404_00905 IPR039562 Membrane fusion protein, biotin-lipoyl like domain H5404_00910 IPR020846 Major facilitator superfamily domain H5404_00910 IPR011701 Major facilitator superfamily H5404_00910 IPR004638 Drug resistance transporter EmrB-like H5404_00910 IPR036259 MFS transporter superfamily H5404_00920 IPR001279 Metallo-beta-lactamase H5404_00920 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D H5404_00920 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like H5404_00930 IPR008928 Six-hairpin glycosidase superfamily H5404_00930 IPR012341 Six-hairpin glycosidase-like superfamily H5404_00930 IPR001661 Glycoside hydrolase, family 37 H5404_00935 IPR002589 Macro domain H5404_00940 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain H5404_00940 IPR037523 Vicinal oxygen chelate (VOC) domain H5404_00940 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase H5404_00945 IPR036390 Winged helix DNA-binding domain superfamily H5404_00945 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_00945 IPR000847 Transcription regulator HTH, LysR H5404_00945 IPR005119 LysR, substrate-binding H5404_00955 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_00955 IPR005119 LysR, substrate-binding H5404_00955 IPR000847 Transcription regulator HTH, LysR H5404_00955 IPR036390 Winged helix DNA-binding domain superfamily H5404_00970 IPR036412 HAD-like superfamily H5404_00970 IPR023198 Phosphoglycolate phosphatase-like, domain 2 H5404_00970 IPR023214 HAD superfamily H5404_00970 IPR041492 Haloacid dehalogenase-like hydrolase H5404_00970 IPR006439 HAD hydrolase, subfamily IA H5404_00995 IPR042070 PucR C-terminal helix-turn-helix domain superfamily H5404_00995 IPR025736 PucR C-terminal helix-turn-helix domain H5404_00995 IPR008599 Putative sugar diacid recognition H5404_00995 IPR041522 CdaR, GGDEF-like domain H5404_01000 IPR003474 Gluconate transporter H5404_01005 IPR004381 Glycerate kinase H5404_01005 IPR018193 Glycerate kinase, flavodoxin-like fold H5404_01005 IPR018197 Glycerate kinase, restriction-enzyme-like fold H5404_01005 IPR036129 Glycerate kinase superfamily H5404_01010 IPR000524 Transcription regulator HTH, GntR H5404_01010 IPR036390 Winged helix DNA-binding domain superfamily H5404_01010 IPR015421 Pyridoxal phosphate-dependent transferase, major domain H5404_01010 IPR004839 Aminotransferase, class I/classII H5404_01010 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_01010 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 H5404_01010 IPR015424 Pyridoxal phosphate-dependent transferase H5404_01030 IPR016181 Acyl-CoA N-acyltransferase H5404_01030 IPR000182 GNAT domain H5404_01030 IPR027455 Spermine/spermidine acetyltransferase, N-terminal H5404_01045 IPR020904 Short-chain dehydrogenase/reductase, conserved site H5404_01045 IPR036291 NAD(P)-binding domain superfamily H5404_01045 IPR002347 Short-chain dehydrogenase/reductase SDR H5404_01055 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK H5404_01055 IPR011031 Multihaem cytochrome H5404_01055 IPR005126 NapC/NirT cytochrome c, N-terminal H5404_01055 IPR036280 Multiheme cytochrome superfamily H5404_01055 IPR038266 NapC/NirT cytochrome c superfamily H5404_01060 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal H5404_01060 IPR006311 Twin-arginine translocation pathway, signal sequence H5404_01060 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site H5404_01060 IPR009010 Aspartate decarboxylase-like domain superfamily H5404_01060 IPR006656 Molybdopterin oxidoreductase H5404_01060 IPR006657 Molybdopterin dinucleotide-binding domain H5404_01060 IPR041460 Molybdopterin oxidoreductase, N-terminal H5404_01060 IPR041954 Trimethylamine-N-oxide reductase-like, molybdopterin-binding domain H5404_01060 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase H5404_01070 IPR013785 Aldolase-type TIM barrel H5404_01070 IPR036206 Thiamin phosphate synthase superfamily H5404_01070 IPR034291 Thiamine phosphate synthase H5404_01070 IPR022998 Thiamine phosphate synthase/TenI H5404_01075 IPR000417 Hydroxyethylthiazole kinase H5404_01075 IPR029056 Ribokinase-like H5404_01080 IPR016084 Haem oxygenase-like, multi-helical H5404_01080 IPR004305 Thiaminase-2/PQQC H5404_01080 IPR027574 Thiaminase II H5404_01085 IPR027939 NMT1/THI5 family H5404_01085 IPR015168 SsuA/THI5-like H5404_01090 IPR035906 MetI-like superfamily H5404_01090 IPR000515 ABC transporter type 1, transmembrane domain MetI-like H5404_01095 IPR003593 AAA+ ATPase domain H5404_01095 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_01095 IPR003439 ABC transporter-like H5404_01095 IPR017871 ABC transporter, conserved site H5404_01100 IPR029056 Ribokinase-like H5404_01100 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase H5404_01100 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase H5404_01105 IPR035068 Metalloprotease TldD/PmbA, N-terminal H5404_01105 IPR002510 Metalloprotease TldD/PmbA H5404_01105 IPR036059 Metalloprotease TldD/PmbA superfamily H5404_01110 IPR025502 TldD H5404_01110 IPR036059 Metalloprotease TldD/PmbA superfamily H5404_01110 IPR035068 Metalloprotease TldD/PmbA, N-terminal H5404_01110 IPR002510 Metalloprotease TldD/PmbA H5404_01115 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal H5404_01115 IPR029028 Alpha/beta knot methyltransferases H5404_01115 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY H5404_01165 IPR021230 Protein of unknown function DUF2810 H5404_01170 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site H5404_01170 IPR036291 NAD(P)-binding domain superfamily H5404_01170 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain H5404_01170 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H5404_01170 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 H5404_01180 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily H5404_01180 IPR030395 Glycerophosphodiester phosphodiesterase domain H5404_01185 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal H5404_01185 IPR036291 NAD(P)-binding domain superfamily H5404_01185 IPR018177 L-lactate dehydrogenase, active site H5404_01185 IPR001236 Lactate/malate dehydrogenase, N-terminal H5404_01185 IPR022383 Lactate/malate dehydrogenase, C-terminal H5404_01185 IPR001557 L-lactate/malate dehydrogenase H5404_01185 IPR011304 L-lactate dehydrogenase H5404_01190 IPR039420 Transcriptional regulatory protein WalR-like H5404_01190 IPR011006 CheY-like superfamily H5404_01190 IPR001789 Signal transduction response regulator, receiver domain H5404_01190 IPR001867 OmpR/PhoB-type DNA-binding domain H5404_01190 IPR016032 Signal transduction response regulator, C-terminal effector H5404_01190 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_01195 IPR003594 Histidine kinase/HSP90-like ATPase H5404_01195 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_01195 IPR038428 2-component histidine kinase, sensor domain superfamily H5404_01195 IPR004358 Signal transduction histidine kinase-related protein, C-terminal H5404_01195 IPR031930 2-component histidine kinase, sensor domain H5404_01195 IPR005467 Histidine kinase domain H5404_01195 IPR003660 HAMP domain H5404_01195 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily H5404_01195 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain H5404_01200 IPR039423 TonB-dependent receptor-like H5404_01200 IPR010105 TonB-dependent siderophore receptor H5404_01200 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily H5404_01200 IPR012910 TonB-dependent receptor, plug domain H5404_01200 IPR037066 TonB-dependent receptor, plug domain superfamily H5404_01200 IPR000531 TonB-dependent receptor-like, beta-barrel H5404_01210 IPR002898 MotA/TolQ/ExbB proton channel H5404_01215 IPR002898 MotA/TolQ/ExbB proton channel H5404_01220 IPR003400 Biopolymer transport protein ExbD/TolR H5404_01260 IPR006128 Adhesion lipoprotein H5404_01260 IPR006129 Adhesin B H5404_01260 IPR006127 Periplasmic solute binding protein, ZnuA-like H5404_01265 IPR003439 ABC transporter-like H5404_01265 IPR017871 ABC transporter, conserved site H5404_01265 IPR003593 AAA+ ATPase domain H5404_01265 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_01270 IPR001626 ABC transporter, TroCD-like H5404_01270 IPR037294 ABC transporter, BtuC-like H5404_01285 IPR023302 Peptidase S9A, N-terminal domain H5404_01285 IPR029058 Alpha/Beta hydrolase fold H5404_01285 IPR002471 Peptidase S9, serine active site H5404_01285 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain H5404_01285 IPR002470 Peptidase S9A, prolyl oligopeptidase H5404_01290 IPR011701 Major facilitator superfamily H5404_01290 IPR020846 Major facilitator superfamily domain H5404_01290 IPR036259 MFS transporter superfamily H5404_01290 IPR004734 Multidrug resistance protein H5404_01295 IPR023694 Agmatinase H5404_01295 IPR006035 Ureohydrolase H5404_01295 IPR023696 Ureohydrolase domain superfamily H5404_01295 IPR005925 Agmatinase-related H5404_01295 IPR020855 Ureohydrolase, manganese-binding site H5404_01300 IPR040634 Arginine decarboxylase, helical bundle domain H5404_01300 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal H5404_01300 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal H5404_01300 IPR000183 Ornithine/DAP/Arg decarboxylase H5404_01300 IPR041128 Arginine decarboxylase, C-terminal helical H5404_01300 IPR029066 PLP-binding barrel H5404_01300 IPR002985 Arginine decarboxylase H5404_01305 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like H5404_01305 IPR001279 Metallo-beta-lactamase H5404_01305 IPR001018 Beta-lactamase, class-B, conserved site H5404_01310 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX H5404_01310 IPR041107 RimK, PreATP-grasp domain H5404_01310 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK H5404_01310 IPR013651 ATP-grasp fold, RimK-type H5404_01310 IPR013815 ATP-grasp fold, subdomain 1 H5404_01310 IPR011761 ATP-grasp fold H5404_01310 IPR021109 Aspartic peptidase domain superfamily H5404_01315 IPR013651 ATP-grasp fold, RimK-type H5404_01315 IPR013815 ATP-grasp fold, subdomain 1 H5404_01315 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK H5404_01315 IPR041107 RimK, PreATP-grasp domain H5404_01315 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX H5404_01315 IPR011761 ATP-grasp fold H5404_01325 IPR005119 LysR, substrate-binding H5404_01325 IPR000847 Transcription regulator HTH, LysR H5404_01325 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_01325 IPR036390 Winged helix DNA-binding domain superfamily H5404_01350 IPR001360 Glycoside hydrolase family 1 H5404_01350 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site H5404_01350 IPR018120 Glycoside hydrolase family 1, active site H5404_01350 IPR017853 Glycoside hydrolase superfamily H5404_01355 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_01355 IPR004358 Signal transduction histidine kinase-related protein, C-terminal H5404_01355 IPR029151 Periplasmic sensor-like domain superfamily H5404_01355 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily H5404_01355 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain H5404_01355 IPR033479 Double Cache domain 1 H5404_01355 IPR003594 Histidine kinase/HSP90-like ATPase H5404_01355 IPR005467 Histidine kinase domain H5404_01355 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) H5404_01360 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 H5404_01360 IPR001789 Signal transduction response regulator, receiver domain H5404_01360 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 H5404_01360 IPR002078 RNA polymerase sigma factor 54 interaction domain H5404_01360 IPR002197 DNA binding HTH domain, Fis-type H5404_01360 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_01360 IPR011006 CheY-like superfamily H5404_01360 IPR003593 AAA+ ATPase domain H5404_01360 IPR025944 Sigma-54 interaction domain, conserved site H5404_01360 IPR009057 Homeobox-like domain superfamily H5404_01365 IPR013656 PAS fold-4 H5404_01365 IPR000700 PAS-associated, C-terminal H5404_01365 IPR035965 PAS domain superfamily H5404_01365 IPR000160 GGDEF domain H5404_01365 IPR000014 PAS domain H5404_01365 IPR029787 Nucleotide cyclase H5404_01370 IPR004685 Branched-chain amino acid transport system II carrier protein H5404_01385 IPR036188 FAD/NAD(P)-binding domain superfamily H5404_01385 IPR006076 FAD dependent oxidoreductase H5404_01385 IPR030862 L-2-hydroxyglutarate dehydrogenase H5404_01395 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase H5404_01395 IPR018176 Tryptophanase, conserved site H5404_01395 IPR013440 Tryptophanase H5404_01395 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 H5404_01395 IPR011166 Beta-eliminating lyase family H5404_01395 IPR015421 Pyridoxal phosphate-dependent transferase, major domain H5404_01395 IPR015424 Pyridoxal phosphate-dependent transferase H5404_01410 IPR002668 Concentrative nucleoside transporter N-terminal domain H5404_01410 IPR008276 Concentrative nucleoside transporter H5404_01410 IPR011657 Concentrative nucleoside transporter C-terminal domain H5404_01410 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial H5404_01410 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain H5404_01420 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like H5404_01420 IPR004574 Alkylated DNA repair protein AlkB H5404_01420 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily H5404_01420 IPR005123 Oxoglutarate/iron-dependent dioxygenase H5404_01425 IPR029787 Nucleotide cyclase H5404_01425 IPR007894 MASE2 H5404_01425 IPR000160 GGDEF domain H5404_01430 IPR000727 Target SNARE coiled-coil homology domain H5404_01430 IPR003660 HAMP domain H5404_01430 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain H5404_01430 IPR004090 Chemotaxis methyl-accepting receptor H5404_01430 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain H5404_01445 IPR029787 Nucleotide cyclase H5404_01445 IPR000160 GGDEF domain H5404_01450 IPR002081 Cryptochrome/DNA photolyase class 1 H5404_01450 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold H5404_01450 IPR014133 Cryptochrome DASH H5404_01450 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily H5404_01450 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily H5404_01450 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain H5404_01450 IPR006050 DNA photolyase, N-terminal H5404_01455 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold H5404_01455 IPR007357 Deoxyribodipyrimidine photolyase-related protein H5404_01455 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily H5404_01460 IPR020612 Methylthiotransferase, conserved site H5404_01460 IPR005839 Methylthiotransferase H5404_01460 IPR007197 Radical SAM H5404_01460 IPR005840 Ribosomal protein S12 methylthiotransferase RimO H5404_01460 IPR038135 Methylthiotransferase, N-terminal domain superfamily H5404_01460 IPR013848 Methylthiotransferase, N-terminal H5404_01460 IPR006638 Elp3/MiaB/NifB H5404_01460 IPR023404 Radical SAM, alpha/beta horseshoe H5404_01470 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily H5404_01470 IPR002579 Peptide methionine sulphoxide reductase MrsB H5404_01470 IPR002569 Peptide methionine sulphoxide reductase MsrA H5404_01470 IPR011057 Mss4-like superfamily H5404_01470 IPR028427 Peptide methionine sulfoxide reductase H5404_01475 IPR036102 OsmC/Ohr superfamily H5404_01475 IPR015946 K homology domain-like, alpha/beta H5404_01475 IPR003718 OsmC/Ohr family H5404_01505 IPR003718 OsmC/Ohr family H5404_01505 IPR036102 OsmC/Ohr superfamily H5404_01505 IPR015946 K homology domain-like, alpha/beta H5404_01510 IPR001451 Hexapeptide repeat H5404_01510 IPR018357 Hexapeptide transferase, conserved site H5404_01510 IPR011004 Trimeric LpxA-like superfamily H5404_01510 IPR024688 Maltose/galactoside acetyltransferase H5404_01545 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_01545 IPR000847 Transcription regulator HTH, LysR H5404_01545 IPR005119 LysR, substrate-binding H5404_01545 IPR036390 Winged helix DNA-binding domain superfamily H5404_01550 IPR036412 HAD-like superfamily H5404_01550 IPR006439 HAD hydrolase, subfamily IA H5404_01550 IPR023214 HAD superfamily H5404_01550 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB H5404_01550 IPR023198 Phosphoglycolate phosphatase-like, domain 2 H5404_01550 IPR041492 Haloacid dehalogenase-like hydrolase H5404_01565 IPR006513 Conserved hypothetical protein CHP01626, YtfJ H5404_01570 IPR001148 Alpha carbonic anhydrase domain H5404_01570 IPR036398 Alpha carbonic anhydrase domain superfamily H5404_01570 IPR041891 Carbonic anhydrase, prokaryotic-like H5404_01570 IPR023561 Carbonic anhydrase, alpha-class H5404_01570 IPR018338 Carbonic anhydrase, alpha-class, conserved site H5404_01575 IPR042117 OMPP1/FadL/TodX superfamily H5404_01575 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) H5404_01580 IPR030190 Macrolide export protein MacA H5404_01580 IPR006143 RND efflux pump, membrane fusion protein H5404_01580 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain H5404_01585 IPR017911 ABC transporter, macrolide export, ATP-binding domain H5404_01585 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_01585 IPR025857 MacB-like periplasmic core domain H5404_01585 IPR003593 AAA+ ATPase domain H5404_01585 IPR003838 ABC transporter permease protein domain H5404_01585 IPR003439 ABC transporter-like H5404_01585 IPR017871 ABC transporter, conserved site H5404_01590 IPR003423 Outer membrane efflux protein H5404_01590 IPR010131 RND efflux system, outer membrane lipoprotein, NodT H5404_01595 IPR001087 GDSL lipase/esterase H5404_01595 IPR036514 SGNH hydrolase superfamily H5404_01595 IPR008265 Lipase, GDSL, active site H5404_01600 IPR023828 Peptidase S8, subtilisin, Ser-active site H5404_01600 IPR015500 Peptidase S8, subtilisin-related H5404_01600 IPR000209 Peptidase S8/S53 domain H5404_01600 IPR022398 Peptidase S8, subtilisin, His-active site H5404_01600 IPR023827 Peptidase S8, subtilisin, Asp-active site H5404_01600 IPR036852 Peptidase S8/S53 domain superfamily H5404_01600 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 H5404_01600 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily H5404_01600 IPR034202 Subtilisin Carlsberg-like catalytic domain H5404_01610 IPR004703 Phosphotransferase system, sugar-specific permease component H5404_01620 IPR016152 Phosphotransferase/anion transporter H5404_01620 IPR002178 PTS EIIA type-2 domain H5404_01625 IPR010982 Lambda repressor-like, DNA-binding domain superfamily H5404_01625 IPR028082 Periplasmic binding protein-like I H5404_01625 IPR000843 LacI-type HTH domain H5404_01630 IPR036412 HAD-like superfamily H5404_01630 IPR006323 Phosphonoacetaldehyde hydrolase H5404_01630 IPR023214 HAD superfamily H5404_01630 IPR041492 Haloacid dehalogenase-like hydrolase H5404_01630 IPR023198 Phosphoglycolate phosphatase-like, domain 2 H5404_01630 IPR006439 HAD hydrolase, subfamily IA H5404_01635 IPR015421 Pyridoxal phosphate-dependent transferase, major domain H5404_01635 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 H5404_01635 IPR015424 Pyridoxal phosphate-dependent transferase H5404_01635 IPR005814 Aminotransferase class-III H5404_01640 IPR015424 Pyridoxal phosphate-dependent transferase H5404_01640 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 H5404_01640 IPR015421 Pyridoxal phosphate-dependent transferase, major domain H5404_01640 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase H5404_01640 IPR012703 2-aminoethylphosphonate--pyruvate transaminase H5404_01640 IPR000192 Aminotransferase class V domain H5404_01645 IPR026045 Ferric binding protein H5404_01655 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_01655 IPR008995 Molybdate/tungstate binding, C-terminal H5404_01655 IPR003439 ABC transporter-like H5404_01655 IPR003593 AAA+ ATPase domain H5404_01655 IPR017666 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT2 H5404_01655 IPR015853 ABC transporter, ferric cation import, FbpC H5404_01655 IPR017871 ABC transporter, conserved site H5404_01660 IPR035906 MetI-like superfamily H5404_01660 IPR000515 ABC transporter type 1, transmembrane domain MetI-like H5404_01665 IPR000524 Transcription regulator HTH, GntR H5404_01665 IPR017722 Phosphonate utilization transcriptional regulator PhnR H5404_01665 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily H5404_01665 IPR036390 Winged helix DNA-binding domain superfamily H5404_01665 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_01665 IPR011663 UbiC transcription regulator-associated H5404_01680 IPR007488 Protein of unknown function DUF535 H5404_01685 IPR006076 FAD dependent oxidoreductase H5404_01685 IPR036188 FAD/NAD(P)-binding domain superfamily H5404_01690 IPR040626 Cytosolic carboxypeptidase, N-terminal H5404_01690 IPR000834 Peptidase M14, carboxypeptidase A H5404_01695 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel H5404_01695 IPR002368 Outer membrane protein, OmpA H5404_01695 IPR000498 Outer membrane protein OmpA-like, transmembrane domain H5404_01695 IPR006664 Outer membrane protein, bacterial H5404_01695 IPR006665 OmpA-like domain H5404_01695 IPR036737 OmpA-like domain superfamily H5404_01695 IPR006690 Outer membrane protein, OmpA-like, conserved site H5404_01700 IPR036390 Winged helix DNA-binding domain superfamily H5404_01700 IPR005119 LysR, substrate-binding H5404_01700 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_01700 IPR000847 Transcription regulator HTH, LysR H5404_01710 IPR000847 Transcription regulator HTH, LysR H5404_01710 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_01710 IPR036390 Winged helix DNA-binding domain superfamily H5404_01710 IPR005119 LysR, substrate-binding H5404_01720 IPR005279 Dipeptide/tripeptide permease H5404_01720 IPR036259 MFS transporter superfamily H5404_01720 IPR000109 Proton-dependent oligopeptide transporter family H5404_01720 IPR020846 Major facilitator superfamily domain H5404_01720 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site H5404_01725 IPR029009 Allosteric substrate binding domain superfamily H5404_01725 IPR005131 Serine dehydratase beta chain H5404_01725 IPR005130 Serine dehydratase-like, alpha subunit H5404_01725 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form H5404_01745 IPR002301 Isoleucine-tRNA ligase H5404_01745 IPR023586 Isoleucine-tRNA ligase, type 2 H5404_01745 IPR033709 Isoleucyl tRNA synthetase type 2, anticodon-binding domain H5404_01745 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold H5404_01745 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding H5404_01745 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site H5404_01745 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding H5404_01745 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain H5404_01745 IPR002300 Aminoacyl-tRNA synthetase, class Ia H5404_01750 IPR000189 Prokaryotic transglycosylase, active site H5404_01750 IPR008258 Transglycosylase SLT domain 1 H5404_01750 IPR023346 Lysozyme-like domain superfamily H5404_01770 IPR001444 Flagellar basal body rod protein, N-terminal H5404_01770 IPR019776 Flagellar basal body rod protein, conserved site H5404_01770 IPR006300 Flagellar basal-body rod protein FlgB H5404_01775 IPR019776 Flagellar basal body rod protein, conserved site H5404_01775 IPR010930 Flagellar basal-body/hook protein, C-terminal domain H5404_01775 IPR006299 Flagellar basal-body rod protein FlgC H5404_01775 IPR001444 Flagellar basal body rod protein, N-terminal H5404_01780 IPR025965 FlgD Ig-like domain H5404_01780 IPR005648 Flagellar hook capping protein H5404_01780 IPR025963 FlgD Tudor-like domain H5404_01785 IPR019776 Flagellar basal body rod protein, conserved site H5404_01785 IPR037058 Flagellar hook protein FlgE superfamily H5404_01785 IPR020013 Flagellar hook-basal body protein, FlgE/F/G H5404_01785 IPR011491 Flagellar hook protein FlgE H5404_01785 IPR010930 Flagellar basal-body/hook protein, C-terminal domain H5404_01785 IPR001444 Flagellar basal body rod protein, N-terminal H5404_01785 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like H5404_01790 IPR019776 Flagellar basal body rod protein, conserved site H5404_01790 IPR020013 Flagellar hook-basal body protein, FlgE/F/G H5404_01790 IPR010930 Flagellar basal-body/hook protein, C-terminal domain H5404_01790 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like H5404_01790 IPR001444 Flagellar basal body rod protein, N-terminal H5404_01795 IPR020013 Flagellar hook-basal body protein, FlgE/F/G H5404_01795 IPR010930 Flagellar basal-body/hook protein, C-terminal domain H5404_01795 IPR012834 Flagellar basal-body rod FlgG H5404_01795 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like H5404_01795 IPR019776 Flagellar basal body rod protein, conserved site H5404_01795 IPR001444 Flagellar basal body rod protein, N-terminal H5404_01800 IPR000527 Flagellar L-ring protein H5404_01805 IPR001782 Flagellar P-ring protein H5404_01810 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain H5404_01810 IPR013377 Peptidoglycan hydrolase FlgJ H5404_01810 IPR019301 Flagellar protein FlgJ, N-terminal H5404_01810 IPR023346 Lysozyme-like domain superfamily H5404_01815 IPR002371 Flagellar hook-associated protein 1 H5404_01815 IPR019776 Flagellar basal body rod protein, conserved site H5404_01815 IPR001444 Flagellar basal body rod protein, N-terminal H5404_01815 IPR010930 Flagellar basal-body/hook protein, C-terminal domain H5404_01820 IPR013384 Flagellar hook-associated protein 3 H5404_01820 IPR001029 Flagellin, D0/D1 domain H5404_01840 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent H5404_01840 IPR000262 FMN-dependent dehydrogenase H5404_01840 IPR013785 Aldolase-type TIM barrel H5404_01865 IPR023695 Thiosulfate sulfurtransferase, bacterial H5404_01865 IPR036873 Rhodanese-like domain superfamily H5404_01865 IPR001763 Rhodanese-like domain H5404_01870 IPR020818 GroES chaperonin family H5404_01870 IPR018369 Chaperonin GroES, conserved site H5404_01870 IPR011032 GroES-like superfamily H5404_01870 IPR037124 GroES chaperonin superfamily H5404_01875 IPR002423 Chaperonin Cpn60/TCP-1 family H5404_01875 IPR027410 TCP-1-like chaperonin intermediate domain superfamily H5404_01875 IPR001844 Chaperonin Cpn60 H5404_01875 IPR018370 Chaperonin Cpn60, conserved site H5404_01875 IPR027409 GroEL-like apical domain superfamily H5404_01875 IPR027413 GroEL-like equatorial domain superfamily H5404_01890 IPR004778 Homoserine/Threonine efflux protein H5404_01890 IPR001123 Amino acid exporter protein, LeuE-type H5404_01895 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_01895 IPR037418 HTH-type transcriptional regulator TrpI, PBP2 H5404_01895 IPR005119 LysR, substrate-binding H5404_01895 IPR000847 Transcription regulator HTH, LysR H5404_01895 IPR036390 Winged helix DNA-binding domain superfamily H5404_01910 IPR001647 DNA-binding HTH domain, TetR-type H5404_01910 IPR009057 Homeobox-like domain superfamily H5404_01910 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily H5404_01910 IPR013570 Transcription regulator YsiA, C-terminal H5404_01920 IPR029052 Metallo-dependent phosphatase-like H5404_01920 IPR041827 CpdB, N-terminal metallophosphatase domain H5404_01920 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type H5404_01920 IPR019931 LPXTG cell wall anchor domain H5404_01920 IPR008334 5'-Nucleotidase, C-terminal H5404_01920 IPR036907 5'-Nucleotidase, C-terminal domain superfamily H5404_01920 IPR006146 5'-Nucleotidase, conserved site H5404_01920 IPR006179 5'-Nucleotidase/apyrase H5404_01925 IPR013785 Aldolase-type TIM barrel H5404_01925 IPR004136 Nitronate monooxygenase H5404_01930 IPR013014 Phosphotransferase system, EIIC component, type 2 H5404_01930 IPR006327 Phosphotransferase system, fructose IIC component H5404_01940 IPR028427 Peptide methionine sulfoxide reductase H5404_01940 IPR011057 Mss4-like superfamily H5404_01940 IPR002579 Peptide methionine sulphoxide reductase MrsB H5404_01940 IPR002569 Peptide methionine sulphoxide reductase MsrA H5404_01940 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily H5404_01945 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase H5404_01945 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain H5404_01945 IPR037523 Vicinal oxygen chelate (VOC) domain H5404_01950 IPR001034 DeoR-type HTH domain H5404_01950 IPR018356 Transcription regulator, HTH DeoR-type, conserved site H5404_01950 IPR014036 DeoR C-terminal sensor domain H5404_01950 IPR037171 NagB/RpiA transferase-like H5404_01950 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_01950 IPR036390 Winged helix DNA-binding domain superfamily H5404_01960 IPR020835 Catalase superfamily H5404_01960 IPR011614 Catalase core domain H5404_01960 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 H5404_01960 IPR002226 Catalase haem-binding site H5404_01960 IPR018028 Catalase, mono-functional, haem-containing H5404_01960 IPR024708 Catalase active site H5404_01960 IPR037060 Catalase core domain superfamily H5404_01960 IPR010582 Catalase immune-responsive domain H5404_01970 IPR036380 Isochorismatase-like superfamily H5404_01970 IPR000868 Isochorismatase-like H5404_01980 IPR040727 Nicotinate phosphoribosyltransferase, N-terminal domain H5404_01980 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal H5404_01980 IPR007229 Nicotinate phosphoribosyltransferase family H5404_01980 IPR006406 Nicotinate phosphoribosyltransferase H5404_01980 IPR041525 Nicotinate/nicotinamide phosphoribosyltransferase H5404_02000 IPR005119 LysR, substrate-binding H5404_02000 IPR000847 Transcription regulator HTH, LysR H5404_02000 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_02000 IPR036390 Winged helix DNA-binding domain superfamily H5404_02005 IPR036737 OmpA-like domain superfamily H5404_02005 IPR006690 Outer membrane protein, OmpA-like, conserved site H5404_02005 IPR006665 OmpA-like domain H5404_02005 IPR002368 Outer membrane protein, OmpA H5404_02005 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel H5404_02005 IPR006664 Outer membrane protein, bacterial H5404_02005 IPR000498 Outer membrane protein OmpA-like, transmembrane domain H5404_02015 IPR010583 MltA-interacting MipA H5404_02020 IPR033450 NlpE, C-terminal OB domain H5404_02020 IPR007298 Copper resistance lipoprotein NlpE H5404_02020 IPR038139 NlpE, C-terminal domain superfamily H5404_02025 IPR013324 RNA polymerase sigma factor, region 3/4-like H5404_02025 IPR002852 Uncharacterised protein family UPF0251 H5404_02025 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_02050 IPR004540 Translation elongation factor EFG/EF2 H5404_02050 IPR041095 Elongation Factor G, domain II H5404_02050 IPR009022 Elongation factor G, domain III H5404_02050 IPR035647 EF-G domain III/V-like H5404_02050 IPR035649 EFG, domain V H5404_02050 IPR000640 Elongation factor EFG, domain V-like H5404_02050 IPR009000 Translation protein, beta-barrel domain superfamily H5404_02050 IPR031157 Tr-type G domain, conserved site H5404_02050 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_02050 IPR020568 Ribosomal protein S5 domain 2-type fold H5404_02050 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup H5404_02050 IPR005225 Small GTP-binding protein domain H5404_02050 IPR000795 Transcription factor, GTP-binding domain H5404_02050 IPR005517 Translation elongation factor EFG/EF2, domain IV H5404_02050 IPR004161 Translation elongation factor EFTu-like, domain 2 H5404_02055 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain H5404_02055 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal H5404_02055 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site H5404_02055 IPR029065 Enolase C-terminal domain-like H5404_02055 IPR029017 Enolase-like, N-terminal H5404_02055 IPR034603 Dipeptide epimerase H5404_02055 IPR036849 Enolase-like, C-terminal domain superfamily H5404_02065 IPR005119 LysR, substrate-binding H5404_02065 IPR000847 Transcription regulator HTH, LysR H5404_02065 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_02065 IPR037414 Transcriptional activator protein LysR, PBP2 domain H5404_02065 IPR036390 Winged helix DNA-binding domain superfamily H5404_02075 IPR010211 Redox-sensitive transcriptional activator SoxR H5404_02075 IPR000551 MerR-type HTH domain H5404_02075 IPR015358 Transcription regulator MerR, DNA binding H5404_02075 IPR009061 Putative DNA-binding domain superfamily H5404_02100 IPR030871 Cardiolipin synthase C H5404_02100 IPR001736 Phospholipase D/Transphosphatidylase H5404_02100 IPR025202 Phospholipase D-like domain H5404_02105 IPR006143 RND efflux pump, membrane fusion protein H5404_02105 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA H5404_02105 IPR039562 Membrane fusion protein, biotin-lipoyl like domain H5404_02110 IPR001036 Acriflavin resistance protein H5404_02110 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains H5404_02130 IPR008995 Molybdate/tungstate binding, C-terminal H5404_02130 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_02130 IPR013611 Transport-associated OB, type 2 H5404_02130 IPR003593 AAA+ ATPase domain H5404_02130 IPR017871 ABC transporter, conserved site H5404_02130 IPR015853 ABC transporter, ferric cation import, FbpC H5404_02130 IPR003439 ABC transporter-like H5404_02155 IPR011663 UbiC transcription regulator-associated H5404_02155 IPR036390 Winged helix DNA-binding domain superfamily H5404_02155 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_02155 IPR017722 Phosphonate utilization transcriptional regulator PhnR H5404_02155 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily H5404_02155 IPR000524 Transcription regulator HTH, GntR H5404_02160 IPR000060 BCCT transporter family H5404_02165 IPR013783 Immunoglobulin-like fold H5404_02165 IPR017853 Glycoside hydrolase superfamily H5404_02165 IPR006104 Glycosyl hydrolases family 2, sugar binding domain H5404_02165 IPR023230 Glycoside hydrolase, family 2, conserved site H5404_02165 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich H5404_02165 IPR006103 Glycoside hydrolase family 2, catalytic domain H5404_02165 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily H5404_02165 IPR008979 Galactose-binding-like domain superfamily H5404_02165 IPR023232 Glycoside hydrolase, family 2, active site H5404_02165 IPR040605 Glycoside hydrolase family 2, domain 5 H5404_02165 IPR006101 Glycoside hydrolase, family 2 H5404_02170 IPR016032 Signal transduction response regulator, C-terminal effector H5404_02170 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_02170 IPR000792 Transcription regulator LuxR, C-terminal H5404_02180 IPR000160 GGDEF domain H5404_02180 IPR029787 Nucleotide cyclase H5404_02180 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region H5404_02195 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains H5404_02195 IPR001036 Acriflavin resistance protein H5404_02195 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA H5404_02200 IPR039562 Membrane fusion protein, biotin-lipoyl like domain H5404_02205 IPR000847 Transcription regulator HTH, LysR H5404_02205 IPR036390 Winged helix DNA-binding domain superfamily H5404_02205 IPR005119 LysR, substrate-binding H5404_02205 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_02215 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein H5404_02215 IPR006059 Bacterial extracellular solute-binding protein H5404_02220 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site H5404_02220 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold H5404_02220 IPR002942 RNA-binding S4 domain H5404_02220 IPR002305 Aminoacyl-tRNA synthetase, class Ic H5404_02220 IPR036986 RNA-binding S4 domain superfamily H5404_02220 IPR002307 Tyrosine-tRNA ligase H5404_02220 IPR024088 Tyrosine-tRNA ligase, bacterial-type H5404_02220 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 H5404_02235 IPR036637 Phosphohistidine domain superfamily H5404_02235 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding H5404_02235 IPR000121 PEP-utilising enzyme, C-terminal H5404_02235 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily H5404_02235 IPR040442 Pyruvate kinase-like domain superfamily H5404_02235 IPR023151 PEP-utilising enzyme, conserved site H5404_02235 IPR013815 ATP-grasp fold, subdomain 1 H5404_02235 IPR018274 PEP-utilising enzyme, active site H5404_02235 IPR008279 PEP-utilising enzyme, mobile domain H5404_02235 IPR006319 Phosphoenolpyruvate synthase H5404_02240 IPR005177 Bifunctional kinase-pyrophosphorylase H5404_02240 IPR026530 Phosphoenolpyruvate synthase regulatory protein H5404_02245 IPR040919 Asparaginase/glutaminase, C-terminal H5404_02245 IPR027475 Asparaginase/glutaminase, active site 2 H5404_02245 IPR020827 Asparaginase/glutaminase, active site 1 H5404_02245 IPR006034 Asparaginase/glutaminase-like H5404_02245 IPR036152 Asparaginase/glutaminase-like superfamily H5404_02245 IPR004550 L-asparaginase, type II H5404_02245 IPR027473 L-asparaginase, C-terminal H5404_02245 IPR027474 L-asparaginase, N-terminal H5404_02245 IPR037152 L-asparaginase, N-terminal domain superfamily H5404_02250 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_02250 IPR042109 Adenylosuccinate synthetase, domain 1 H5404_02250 IPR042110 Adenylosuccinate synthetase, domain 2 H5404_02250 IPR042111 Adenylosuccinate synthetase, domain 3 H5404_02250 IPR001114 Adenylosuccinate synthetase H5404_02255 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_02255 IPR005119 LysR, substrate-binding H5404_02255 IPR000847 Transcription regulator HTH, LysR H5404_02255 IPR036390 Winged helix DNA-binding domain superfamily H5404_02270 IPR018636 Protein of unknown function DUF2058 H5404_02275 IPR009057 Homeobox-like domain superfamily H5404_02275 IPR018060 DNA binding HTH domain, AraC-type H5404_02275 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal H5404_02275 IPR020449 Transcription regulator HTH, AraC- type H5404_02280 IPR020904 Short-chain dehydrogenase/reductase, conserved site H5404_02280 IPR036291 NAD(P)-binding domain superfamily H5404_02280 IPR002347 Short-chain dehydrogenase/reductase SDR H5404_02290 IPR020843 Polyketide synthase, enoylreductase domain H5404_02290 IPR013149 Alcohol dehydrogenase, C-terminal H5404_02290 IPR011032 GroES-like superfamily H5404_02290 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site H5404_02290 IPR013154 Alcohol dehydrogenase, N-terminal H5404_02290 IPR004627 L-threonine 3-dehydrogenase H5404_02290 IPR036291 NAD(P)-binding domain superfamily H5404_02295 IPR013785 Aldolase-type TIM barrel H5404_02295 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal H5404_02305 IPR036390 Winged helix DNA-binding domain superfamily H5404_02305 IPR005119 LysR, substrate-binding H5404_02305 IPR000847 Transcription regulator HTH, LysR H5404_02305 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_02310 IPR036390 Winged helix DNA-binding domain superfamily H5404_02310 IPR000847 Transcription regulator HTH, LysR H5404_02310 IPR005119 LysR, substrate-binding H5404_02310 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_02320 IPR014001 Helicase superfamily 1/2, ATP-binding domain H5404_02320 IPR011545 DEAD/DEAH box helicase domain H5404_02320 IPR001650 Helicase, C-terminal H5404_02320 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_02320 IPR028622 ATP-dependent RNA helicase RhlE H5404_02320 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site H5404_02320 IPR014014 RNA helicase, DEAD-box type, Q motif H5404_02335 IPR029044 Nucleotide-diphospho-sugar transferases H5404_02335 IPR026463 Chitooligosaccharide synthase NodC H5404_02335 IPR001173 Glycosyltransferase 2-like H5404_02360 IPR015424 Pyridoxal phosphate-dependent transferase H5404_02360 IPR015421 Pyridoxal phosphate-dependent transferase, major domain H5404_02360 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 H5404_02360 IPR004839 Aminotransferase, class I/classII H5404_02365 IPR002491 ABC transporter periplasmic binding domain H5404_02365 IPR020449 Transcription regulator HTH, AraC- type H5404_02365 IPR018062 HTH domain AraC-type, conserved site H5404_02365 IPR018060 DNA binding HTH domain, AraC-type H5404_02365 IPR009057 Homeobox-like domain superfamily H5404_02395 IPR008526 Inner membrane protein YedI H5404_02400 IPR032466 Metal-dependent hydrolase H5404_02400 IPR002195 Dihydroorotase, conserved site H5404_02400 IPR004721 Dihydroorotase homodimeric type H5404_02400 IPR006680 Amidohydrolase-related H5404_02405 IPR000612 Proteolipid membrane potential modulator H5404_02410 IPR005302 Molybdenum cofactor sulfurase, C-terminal H5404_02410 IPR036010 2Fe-2S ferredoxin-like superfamily H5404_02410 IPR012675 Beta-grasp domain superfamily H5404_02410 IPR012675 Beta-grasp domain superfamily H5404_02410 IPR005303 MOSC, N-terminal beta barrel H5404_02410 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site H5404_02410 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site H5404_02410 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain H5404_02410 IPR005302 Molybdenum cofactor sulfurase, C-terminal H5404_02410 IPR011037 Pyruvate kinase-like, insert domain superfamily H5404_02410 IPR036010 2Fe-2S ferredoxin-like superfamily H5404_02410 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain H5404_02410 IPR005303 MOSC, N-terminal beta barrel H5404_02410 IPR011037 Pyruvate kinase-like, insert domain superfamily H5404_02415 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold H5404_02415 IPR022926 NH(3)-dependent NAD(+) synthetase H5404_02415 IPR003694 NAD(+) synthetase H5404_02415 IPR022310 NAD/GMP synthase H5404_02420 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold H5404_02420 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase H5404_02420 IPR004821 Cytidyltransferase-like domain H5404_02460 IPR003593 AAA+ ATPase domain H5404_02460 IPR003439 ABC transporter-like H5404_02460 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_02460 IPR015863 ABC transporter, hemin import, HmuV H5404_02465 IPR000522 ABC transporter, permease protein, BtuC-like H5404_02465 IPR037294 ABC transporter, BtuC-like H5404_02475 IPR003400 Biopolymer transport protein ExbD/TolR H5404_02480 IPR002898 MotA/TolQ/ExbB proton channel H5404_02485 IPR006260 TonB/TolA, C-terminal H5404_02485 IPR037682 TonB, C-terminal H5404_02485 IPR003538 Gram-negative bacterial TonB protein H5404_02490 IPR006638 Elp3/MiaB/NifB H5404_02490 IPR034505 Anaerobic coproporphyrinogen-III oxidase H5404_02490 IPR007197 Radical SAM H5404_02490 IPR023404 Radical SAM, alpha/beta horseshoe H5404_02490 IPR026332 Anaerobilin synthase HutW H5404_02495 IPR010413 Intracellular heme transport protein HutX-like H5404_02500 IPR012349 FMN-binding split barrel H5404_02500 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative H5404_02500 IPR014419 Heme utilization protein HutZ H5404_02510 IPR036061 CheW-like domain superfamily H5404_02510 IPR001789 Signal transduction response regulator, receiver domain H5404_02510 IPR011006 CheY-like superfamily H5404_02510 IPR002545 CheW-like domain H5404_02510 IPR024181 Chemotaxis response regulator CheV H5404_02515 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site H5404_02515 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type H5404_02530 IPR006120 Resolvase, HTH domain H5404_02530 IPR006118 Recombinase, conserved site H5404_02530 IPR009057 Homeobox-like domain superfamily H5404_02530 IPR006119 Resolvase, N-terminal catalytic domain H5404_02530 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily H5404_02535 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily H5404_02535 IPR004358 Signal transduction histidine kinase-related protein, C-terminal H5404_02535 IPR003594 Histidine kinase/HSP90-like ATPase H5404_02535 IPR005467 Histidine kinase domain H5404_02535 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_02535 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain H5404_02550 IPR005119 LysR, substrate-binding H5404_02550 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_02550 IPR037402 HTH-type transcriptional regulator YidZ, PBP2 domain H5404_02550 IPR036390 Winged helix DNA-binding domain superfamily H5404_02550 IPR000847 Transcription regulator HTH, LysR H5404_02550 IPR023746 Transcription regulator HTH, YidZ H5404_02555 IPR036259 MFS transporter superfamily H5404_02555 IPR023697 Multidrug resistance protein MdtL H5404_02555 IPR020846 Major facilitator superfamily domain H5404_02555 IPR011701 Major facilitator superfamily H5404_02555 IPR005829 Sugar transporter, conserved site H5404_02570 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site H5404_02570 IPR000891 Pyruvate carboxyltransferase H5404_02570 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily H5404_02570 IPR039371 LeuA, N-terminal catalytic TIM barrel domain H5404_02570 IPR013785 Aldolase-type TIM barrel H5404_02570 IPR005668 2-isopropylmalate synthase H5404_02570 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain H5404_02590 IPR000477 Reverse transcriptase domain H5404_02595 IPR000209 Peptidase S8/S53 domain H5404_02595 IPR034084 Thermitase-like, domain H5404_02595 IPR022398 Peptidase S8, subtilisin, His-active site H5404_02595 IPR023827 Peptidase S8, subtilisin, Asp-active site H5404_02595 IPR023828 Peptidase S8, subtilisin, Ser-active site H5404_02595 IPR015500 Peptidase S8, subtilisin-related H5404_02595 IPR036852 Peptidase S8/S53 domain superfamily H5404_02615 IPR002016 Haem peroxidase H5404_02615 IPR000763 Catalase-peroxidase haem H5404_02615 IPR010255 Haem peroxidase superfamily H5404_02615 IPR019794 Peroxidase, active site H5404_02620 IPR012347 Ferritin-like H5404_02620 IPR023188 DNA-binding protein Dps, conserved site H5404_02620 IPR009078 Ferritin-like superfamily H5404_02620 IPR008331 Ferritin/DPS protein domain H5404_02620 IPR002177 DNA-binding protein Dps H5404_02625 IPR005119 LysR, substrate-binding H5404_02625 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_02625 IPR036390 Winged helix DNA-binding domain superfamily H5404_02625 IPR000847 Transcription regulator HTH, LysR H5404_02635 IPR036390 Winged helix DNA-binding domain superfamily H5404_02635 IPR005119 LysR, substrate-binding H5404_02635 IPR000847 Transcription regulator HTH, LysR H5404_02635 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_02640 IPR000917 Sulfatase, N-terminal H5404_02640 IPR017850 Alkaline-phosphatase-like, core domain superfamily H5404_02640 IPR024607 Sulfatase, conserved site H5404_02645 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme H5404_02645 IPR007197 Radical SAM H5404_02645 IPR013785 Aldolase-type TIM barrel H5404_02645 IPR023885 4Fe4S-binding SPASM domain H5404_02660 IPR007280 Peptidase, C-terminal, archaeal/bacterial H5404_02660 IPR002169 Peptidase M9A/M9B, collagenase, bacterial H5404_02660 IPR013661 Peptidase M9, collagenase, N-terminal domain H5404_02670 IPR017853 Glycoside hydrolase superfamily H5404_02670 IPR006046 Alpha amylase H5404_02670 IPR006047 Glycosyl hydrolase, family 13, catalytic domain H5404_02685 IPR006153 Cation/H+ exchanger H5404_02685 IPR003148 Regulator of K+ conductance, N-terminal H5404_02685 IPR036291 NAD(P)-binding domain superfamily H5404_02685 IPR004771 K+/H+ exchanger H5404_02685 IPR023941 Glutathione-regulated potassium-efflux system protein KefC H5404_02685 IPR006036 Potassium uptake protein TrkA H5404_02685 IPR038770 Sodium/solute symporter superfamily H5404_02690 IPR029039 Flavoprotein-like superfamily H5404_02690 IPR003680 Flavodoxin-like fold H5404_02695 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold H5404_02695 IPR006015 Universal stress protein A family H5404_02695 IPR006016 UspA H5404_02700 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_02700 IPR032781 ABC-transporter extension domain H5404_02700 IPR003439 ABC transporter-like H5404_02700 IPR003593 AAA+ ATPase domain H5404_02700 IPR017871 ABC transporter, conserved site H5404_02705 IPR023302 Peptidase S9A, N-terminal domain H5404_02705 IPR029058 Alpha/Beta hydrolase fold H5404_02705 IPR002471 Peptidase S9, serine active site H5404_02705 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain H5404_02705 IPR002470 Peptidase S9A, prolyl oligopeptidase H5404_02715 IPR006143 RND efflux pump, membrane fusion protein H5404_02715 IPR022824 Multidrug resistance protein MdtA H5404_02715 IPR039562 Membrane fusion protein, biotin-lipoyl like domain H5404_02720 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains H5404_02720 IPR001036 Acriflavin resistance protein H5404_02720 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 H5404_02725 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) H5404_02725 IPR042117 OMPP1/FadL/TodX superfamily H5404_02735 IPR016181 Acyl-CoA N-acyltransferase H5404_02735 IPR000182 GNAT domain H5404_02745 IPR029787 Nucleotide cyclase H5404_02745 IPR000160 GGDEF domain H5404_02750 IPR012338 Beta-lactamase/transpeptidase-like H5404_02750 IPR000871 Beta-lactamase, class-A H5404_02750 IPR023650 Beta-lactamase, class-A active site H5404_02765 IPR001036 Acriflavin resistance protein H5404_02765 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA H5404_02765 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains H5404_02785 IPR041924 Formate dehydrogenase H, N-terminal H5404_02785 IPR006478 Formate dehydrogenase, alpha subunit H5404_02785 IPR006657 Molybdopterin dinucleotide-binding domain H5404_02785 IPR009010 Aspartate decarboxylase-like domain superfamily H5404_02785 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain H5404_02785 IPR036010 2Fe-2S ferredoxin-like superfamily H5404_02785 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site H5404_02785 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain H5404_02785 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding H5404_02785 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain H5404_02785 IPR006656 Molybdopterin oxidoreductase H5404_02800 IPR000412 ABC-2 transporter H5404_02805 IPR003593 AAA+ ATPase domain H5404_02805 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_02805 IPR017871 ABC transporter, conserved site H5404_02805 IPR003439 ABC transporter-like H5404_02815 IPR004090 Chemotaxis methyl-accepting receptor H5404_02815 IPR003660 HAMP domain H5404_02815 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain H5404_02820 IPR015943 WD40/YVTN repeat-like-containing domain superfamily H5404_02820 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily H5404_02820 IPR019405 Lactonase, 7-bladed beta propeller H5404_02825 IPR003719 Phenazine biosynthesis PhzF protein H5404_02830 IPR005247 YbhB/YbcL H5404_02830 IPR036610 PEBP-like superfamily H5404_02830 IPR008914 Phosphatidylethanolamine-binding protein H5404_02840 IPR004706 Arsenical-resistance protein Acr3 H5404_02840 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 H5404_02840 IPR038770 Sodium/solute symporter superfamily H5404_02855 IPR002178 PTS EIIA type-2 domain H5404_02855 IPR016152 Phosphotransferase/anion transporter H5404_02860 IPR036095 PTS system IIB component-like superfamily H5404_02860 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC H5404_02860 IPR013014 Phosphotransferase system, EIIC component, type 2 H5404_02860 IPR003352 Phosphotransferase system, EIIC H5404_02860 IPR029503 Phosphotransferase system EIIB component, mannitol-specific H5404_02860 IPR003501 Phosphotransferase system, EIIB component, type 2/3 H5404_02860 IPR013011 Phosphotransferase system, EIIB component, type 2 H5404_02865 IPR036291 NAD(P)-binding domain superfamily H5404_02865 IPR013154 Alcohol dehydrogenase, N-terminal H5404_02865 IPR013149 Alcohol dehydrogenase, C-terminal H5404_02865 IPR011032 GroES-like superfamily H5404_02875 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_02880 IPR023710 Probable phosphatase YcdX H5404_02880 IPR003141 Polymerase/histidinol phosphatase, N-terminal H5404_02880 IPR016195 Polymerase/histidinol phosphatase-like H5404_02905 IPR002941 DNA methylase N-4/N-6 H5404_02905 IPR002052 DNA methylase, N-6 adenine-specific, conserved site H5404_02905 IPR001091 Restriction/modification DNA-methylase H5404_02905 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_03120 IPR009084 B transposition protein, C-terminal H5404_03120 IPR001387 Cro/C1-type helix-turn-helix domain H5404_03120 IPR010982 Lambda repressor-like, DNA-binding domain superfamily H5404_03120 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_03120 IPR003593 AAA+ ATPase domain H5404_03120 IPR036733 B transposition protein, C-terminal domain superfamily H5404_03155 IPR013059 Tryptophan/tyrosine transporter H5404_03155 IPR018227 Amino acid/polyamine transporter 2 H5404_03165 IPR003660 HAMP domain H5404_03165 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain H5404_03165 IPR029151 Periplasmic sensor-like domain superfamily H5404_03165 IPR004090 Chemotaxis methyl-accepting receptor H5404_03165 IPR033479 Double Cache domain 1 H5404_03165 IPR000727 Target SNARE coiled-coil homology domain H5404_03170 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain H5404_03190 IPR011055 Duplicated hybrid motif H5404_03190 IPR018392 LysM domain H5404_03190 IPR013731 Opacity-associated protein A, N-terminal H5404_03190 IPR016047 Peptidase M23 H5404_03200 IPR036390 Winged helix DNA-binding domain superfamily H5404_03200 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_03200 IPR000847 Transcription regulator HTH, LysR H5404_03200 IPR005119 LysR, substrate-binding H5404_03205 IPR020846 Major facilitator superfamily domain H5404_03205 IPR004734 Multidrug resistance protein H5404_03205 IPR036259 MFS transporter superfamily H5404_03205 IPR011701 Major facilitator superfamily H5404_03215 IPR036249 Thioredoxin-like superfamily H5404_03215 IPR002109 Glutaredoxin H5404_03215 IPR014025 Glutaredoxin subgroup H5404_03215 IPR011767 Glutaredoxin active site H5404_03215 IPR011900 Glutaredoxin, GrxC H5404_03220 IPR000620 EamA domain H5404_03225 IPR013793 Porin, Gram-negative type, conserved site H5404_03225 IPR001897 Porin, gammaproteobacterial H5404_03225 IPR001702 Porin, Gram-negative type H5404_03225 IPR023614 Porin domain superfamily H5404_03225 IPR033900 Porin domain, Gram-negative type H5404_03235 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily H5404_03235 IPR011234 Fumarylacetoacetase-like, C-terminal H5404_03250 IPR018060 DNA binding HTH domain, AraC-type H5404_03250 IPR020449 Transcription regulator HTH, AraC- type H5404_03250 IPR009057 Homeobox-like domain superfamily H5404_03255 IPR004778 Homoserine/Threonine efflux protein H5404_03255 IPR001123 Amino acid exporter protein, LeuE-type H5404_03265 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III H5404_03265 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II H5404_03265 IPR005843 Alpha-D-phosphohexomutase, C-terminal H5404_03265 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I H5404_03265 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily H5404_03265 IPR016066 Alpha-D-phosphohexomutase, conserved site H5404_03265 IPR005841 Alpha-D-phosphohexomutase superfamily H5404_03265 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III H5404_03270 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily H5404_03270 IPR008972 Cupredoxin H5404_03270 IPR014222 Cytochrome c oxidase, subunit II H5404_03270 IPR034210 Cytochrome c oxidase subunit 2, C-terminal H5404_03270 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain H5404_03270 IPR001505 Copper centre Cu(A) H5404_03270 IPR002429 Cytochrome c oxidase subunit II-like C-terminal H5404_03275 IPR000883 Cytochrome c oxidase subunit I H5404_03275 IPR033944 Cytochrome c oxidase subunit I domain H5404_03275 IPR014241 Cytochrome c oxidase, subunit I bacterial type H5404_03275 IPR036927 Cytochrome c oxidase-like, subunit I superfamily H5404_03275 IPR023616 Cytochrome c oxidase-like, subunit I domain H5404_03275 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site H5404_03280 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily H5404_03280 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 H5404_03285 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle H5404_03285 IPR035973 Cytochrome c oxidase subunit III-like superfamily H5404_03285 IPR024791 Cytochrome c oxidase subunit III H5404_03285 IPR000298 Cytochrome c oxidase subunit III-like H5404_03285 IPR033945 Cytochrome c oxidase subunit III domain H5404_03305 IPR003780 COX15/CtaA family H5404_03305 IPR023754 Heme A synthase, type 2 H5404_03310 IPR000537 UbiA prenyltransferase family H5404_03310 IPR006369 Protohaem IX farnesyltransferase H5404_03310 IPR030470 UbiA prenyltransferase conserved site H5404_03315 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain H5404_03315 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal H5404_03315 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily H5404_03345 IPR012340 Nucleic acid-binding, OB-fold H5404_03345 IPR011129 Cold shock domain H5404_03345 IPR002059 Cold-shock protein, DNA-binding H5404_03345 IPR019844 Cold-shock (CSD) domain H5404_03345 IPR012156 Cold shock, CspA H5404_03350 IPR005589 Alternative ribosome-rescue factor A H5404_03355 IPR000700 PAS-associated, C-terminal H5404_03355 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain H5404_03355 IPR004090 Chemotaxis methyl-accepting receptor H5404_03355 IPR001610 PAC motif H5404_03355 IPR000014 PAS domain H5404_03355 IPR035965 PAS domain superfamily H5404_03355 IPR013655 PAS fold-3 H5404_03360 IPR000160 GGDEF domain H5404_03360 IPR029787 Nucleotide cyclase H5404_03375 IPR017911 ABC transporter, macrolide export, ATP-binding domain H5404_03375 IPR017871 ABC transporter, conserved site H5404_03375 IPR025857 MacB-like periplasmic core domain H5404_03375 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_03375 IPR003593 AAA+ ATPase domain H5404_03375 IPR003838 ABC transporter permease protein domain H5404_03375 IPR003439 ABC transporter-like H5404_03380 IPR017871 ABC transporter, conserved site H5404_03380 IPR017911 ABC transporter, macrolide export, ATP-binding domain H5404_03380 IPR025857 MacB-like periplasmic core domain H5404_03380 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_03380 IPR003593 AAA+ ATPase domain H5404_03380 IPR003838 ABC transporter permease protein domain H5404_03380 IPR003439 ABC transporter-like H5404_03390 IPR004090 Chemotaxis methyl-accepting receptor H5404_03390 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain H5404_03390 IPR033480 Single Cache domain 2 H5404_03390 IPR003660 HAMP domain H5404_03395 IPR023188 DNA-binding protein Dps, conserved site H5404_03395 IPR012347 Ferritin-like H5404_03395 IPR008331 Ferritin/DPS protein domain H5404_03395 IPR002177 DNA-binding protein Dps H5404_03395 IPR009078 Ferritin-like superfamily H5404_03405 IPR011042 Six-bladed beta-propeller, TolB-like H5404_03405 IPR012938 Glucose/Sorbosone dehydrogenase H5404_03405 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase H5404_03410 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA H5404_03410 IPR018211 Alcohol dehydrogenase, iron-type, conserved site H5404_03410 IPR039697 Iron-type alcohol dehydrogenase-like H5404_03415 IPR029062 Class I glutamine amidotransferase-like H5404_03415 IPR026041 Glyoxalase ElbB H5404_03425 IPR000620 EamA domain H5404_03450 IPR036390 Winged helix DNA-binding domain superfamily H5404_03450 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_03450 IPR000847 Transcription regulator HTH, LysR H5404_03450 IPR005119 LysR, substrate-binding H5404_03455 IPR010233 Ubiquinone biosynthesis O-methyltransferase H5404_03455 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_03460 IPR000873 AMP-dependent synthetase/ligase H5404_03460 IPR020845 AMP-binding, conserved site H5404_03460 IPR025110 AMP-binding enzyme, C-terminal domain H5404_03460 IPR005914 Acetoacetyl-CoA synthase H5404_03460 IPR042099 AMP-dependent synthetase-like superfamily H5404_03465 IPR005960 Phenylalanine-4-hydroxylase, monomeric form H5404_03465 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily H5404_03465 IPR001273 Aromatic amino acid hydroxylase H5404_03465 IPR036951 Aromatic amino acid hydroxylase superfamily H5404_03465 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site H5404_03465 IPR019774 Aromatic amino acid hydroxylase, C-terminal H5404_03470 IPR001533 Pterin 4 alpha carbinolamine dehydratase H5404_03470 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily H5404_03490 IPR024530 Putative quorum-sensing-regulated virulence factor H5404_03495 IPR014014 RNA helicase, DEAD-box type, Q motif H5404_03495 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site H5404_03495 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_03495 IPR001650 Helicase, C-terminal H5404_03495 IPR011545 DEAD/DEAH box helicase domain H5404_03495 IPR028622 ATP-dependent RNA helicase RhlE H5404_03495 IPR014001 Helicase superfamily 1/2, ATP-binding domain H5404_03500 IPR018668 DNA-binding protein VF530-like H5404_03500 IPR036361 SAP domain superfamily H5404_03505 IPR023026 Tryptophan synthase beta chain/beta chain-like H5404_03505 IPR006654 Tryptophan synthase, beta chain H5404_03505 IPR006653 Tryptophan synthase, beta chain, conserved site H5404_03505 IPR001926 Pyridoxal-phosphate dependent enzyme H5404_03505 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme H5404_03515 IPR000816 Peptidase C15, pyroglutamyl peptidase I H5404_03515 IPR033693 Pyroglutamyl peptidase I, Glu active site H5404_03515 IPR033694 Pyroglutamyl peptidase I, Cys active site H5404_03515 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like H5404_03515 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily H5404_03515 IPR029762 Pyroglutamyl peptidase I, bacterial-type H5404_03525 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_03525 IPR003495 CobW/HypB/UreG, nucleotide-binding domain H5404_03525 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal H5404_03530 IPR014014 RNA helicase, DEAD-box type, Q motif H5404_03530 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_03530 IPR001650 Helicase, C-terminal H5404_03530 IPR014001 Helicase superfamily 1/2, ATP-binding domain H5404_03530 IPR028622 ATP-dependent RNA helicase RhlE H5404_03530 IPR011545 DEAD/DEAH box helicase domain H5404_03530 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site H5404_03550 IPR001633 EAL domain H5404_03550 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain H5404_03550 IPR035919 EAL domain superfamily H5404_03555 IPR003439 ABC transporter-like H5404_03555 IPR003593 AAA+ ATPase domain H5404_03555 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_03560 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain H5404_03560 IPR003660 HAMP domain H5404_03560 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain H5404_03560 IPR000727 Target SNARE coiled-coil homology domain H5404_03560 IPR004090 Chemotaxis methyl-accepting receptor H5404_03570 IPR036390 Winged helix DNA-binding domain superfamily H5404_03570 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_03570 IPR000847 Transcription regulator HTH, LysR H5404_03570 IPR005119 LysR, substrate-binding H5404_03575 IPR000917 Sulfatase, N-terminal H5404_03575 IPR024607 Sulfatase, conserved site H5404_03575 IPR017850 Alkaline-phosphatase-like, core domain superfamily H5404_03580 IPR023885 4Fe4S-binding SPASM domain H5404_03580 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme H5404_03580 IPR007197 Radical SAM H5404_03580 IPR013785 Aldolase-type TIM barrel H5404_03585 IPR036390 Winged helix DNA-binding domain superfamily H5404_03585 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_03585 IPR000847 Transcription regulator HTH, LysR H5404_03585 IPR005119 LysR, substrate-binding H5404_03595 IPR029069 HotDog domain superfamily H5404_03595 IPR039375 Nodulation protein N-like H5404_03595 IPR002539 MaoC-like dehydratase domain H5404_03600 IPR024370 PBP domain H5404_03610 IPR018062 HTH domain AraC-type, conserved site H5404_03610 IPR020449 Transcription regulator HTH, AraC- type H5404_03610 IPR009057 Homeobox-like domain superfamily H5404_03610 IPR018060 DNA binding HTH domain, AraC-type H5404_03615 IPR022966 Ribonuclease II/R, conserved site H5404_03615 IPR001900 Ribonuclease II/R H5404_03615 IPR003029 S1 domain H5404_03615 IPR011804 Ribonuclease II H5404_03615 IPR013223 Ribonuclease B, N-terminal OB domain H5404_03615 IPR004476 Ribonuclease II/ribonuclease R H5404_03615 IPR012340 Nucleic acid-binding, OB-fold H5404_03615 IPR011129 Cold shock domain H5404_03620 IPR028618 ATP-dependent RNA helicase DeaD H5404_03620 IPR014014 RNA helicase, DEAD-box type, Q motif H5404_03620 IPR001650 Helicase, C-terminal H5404_03620 IPR011545 DEAD/DEAH box helicase domain H5404_03620 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site H5404_03620 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily H5404_03620 IPR014001 Helicase superfamily 1/2, ATP-binding domain H5404_03620 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain H5404_03620 IPR034415 CsdA, RNA recognition motif H5404_03620 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_03625 IPR035965 PAS domain superfamily H5404_03625 IPR000014 PAS domain H5404_03625 IPR029787 Nucleotide cyclase H5404_03625 IPR000160 GGDEF domain H5404_03625 IPR035919 EAL domain superfamily H5404_03625 IPR001633 EAL domain H5404_03630 IPR023865 Aliphatic acid kinase, short-chain, conserved site H5404_03630 IPR004372 Acetate/propionate kinase H5404_03630 IPR000890 Aliphatic acid kinase, short-chain H5404_03635 IPR000700 PAS-associated, C-terminal H5404_03635 IPR035965 PAS domain superfamily H5404_03635 IPR000014 PAS domain H5404_03635 IPR001610 PAC motif H5404_03635 IPR013655 PAS fold-3 H5404_03635 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain H5404_03635 IPR004090 Chemotaxis methyl-accepting receptor H5404_03645 IPR019275 Protein of unknown function DUF2301 H5404_03650 IPR013785 Aldolase-type TIM barrel H5404_03650 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site H5404_03650 IPR000891 Pyruvate carboxyltransferase H5404_03655 IPR029045 ClpP/crotonase-like domain superfamily H5404_03655 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site H5404_03655 IPR001753 Enoyl-CoA hydratase/isomerase H5404_03655 IPR014748 Enoyl-CoA hydratase, C-terminal H5404_03660 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal H5404_03660 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal H5404_03660 IPR029045 ClpP/crotonase-like domain superfamily H5404_03660 IPR034733 Acetyl-CoA carboxylase H5404_03665 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily H5404_03665 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal H5404_03665 IPR006089 Acyl-CoA dehydrogenase, conserved site H5404_03665 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal H5404_03665 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain H5404_03665 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal H5404_03665 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily H5404_03670 IPR011789 Cu(I)-responsive transcriptional regulator H5404_03670 IPR009061 Putative DNA-binding domain superfamily H5404_03670 IPR000551 MerR-type HTH domain H5404_03670 IPR015358 Transcription regulator MerR, DNA binding H5404_03675 IPR020615 Thiolase, acyl-enzyme intermediate active site H5404_03675 IPR020610 Thiolase, active site H5404_03675 IPR020617 Thiolase, C-terminal H5404_03675 IPR002155 Thiolase H5404_03675 IPR020613 Thiolase, conserved site H5404_03675 IPR016039 Thiolase-like H5404_03675 IPR020616 Thiolase, N-terminal H5404_03680 IPR015590 Aldehyde dehydrogenase domain H5404_03680 IPR016161 Aldehyde/histidinol dehydrogenase H5404_03680 IPR016163 Aldehyde dehydrogenase, C-terminal H5404_03680 IPR016160 Aldehyde dehydrogenase, cysteine active site H5404_03680 IPR016162 Aldehyde dehydrogenase, N-terminal H5404_03680 IPR010061 Methylmalonate-semialdehyde dehydrogenase H5404_03685 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily H5404_03685 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal H5404_03685 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal H5404_03685 IPR006089 Acyl-CoA dehydrogenase, conserved site H5404_03685 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain H5404_03685 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal H5404_03685 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily H5404_03690 IPR029045 ClpP/crotonase-like domain superfamily H5404_03690 IPR014748 Enoyl-CoA hydratase, C-terminal H5404_03690 IPR001753 Enoyl-CoA hydratase/isomerase H5404_03690 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site H5404_03695 IPR014748 Enoyl-CoA hydratase, C-terminal H5404_03695 IPR001753 Enoyl-CoA hydratase/isomerase H5404_03695 IPR029045 ClpP/crotonase-like domain superfamily H5404_03695 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site H5404_03700 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily H5404_03700 IPR015815 3-hydroxyisobutyrate dehydrogenase-related H5404_03700 IPR013328 6-phosphogluconate dehydrogenase, domain 2 H5404_03700 IPR011548 3-hydroxyisobutyrate dehydrogenase H5404_03700 IPR036291 NAD(P)-binding domain superfamily H5404_03700 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding H5404_03700 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site H5404_03700 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain H5404_03705 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase H5404_03705 IPR036291 NAD(P)-binding domain superfamily H5404_03705 IPR020904 Short-chain dehydrogenase/reductase, conserved site H5404_03705 IPR002347 Short-chain dehydrogenase/reductase SDR H5404_03710 IPR034227 Ubiquinol oxidase subunit 2, cupredoxin domain H5404_03710 IPR008972 Cupredoxin H5404_03710 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily H5404_03710 IPR006333 Cytochrome o ubiquinol oxidase subunit II H5404_03710 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain H5404_03710 IPR010514 COX aromatic rich motif H5404_03710 IPR002429 Cytochrome c oxidase subunit II-like C-terminal H5404_03715 IPR023616 Cytochrome c oxidase-like, subunit I domain H5404_03715 IPR014207 Cytochrome o ubiquinol oxidase, subunit I H5404_03715 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site H5404_03715 IPR000883 Cytochrome c oxidase subunit I H5404_03715 IPR036927 Cytochrome c oxidase-like, subunit I superfamily H5404_03720 IPR033946 Ubiquinol oxidase subunit III domain H5404_03720 IPR014206 Cytochrome o ubiquinol oxidase, subunit III H5404_03720 IPR035973 Cytochrome c oxidase subunit III-like superfamily H5404_03720 IPR000298 Cytochrome c oxidase subunit III-like H5404_03720 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle H5404_03720 IPR024791 Cytochrome c oxidase subunit III H5404_03730 IPR006369 Protohaem IX farnesyltransferase H5404_03730 IPR000537 UbiA prenyltransferase family H5404_03730 IPR030470 UbiA prenyltransferase conserved site H5404_03735 IPR023663 NADPH dehydrogenase H5404_03735 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal H5404_03735 IPR013785 Aldolase-type TIM barrel H5404_03740 IPR012951 Berberine/berberine-like H5404_03740 IPR006094 FAD linked oxidase, N-terminal H5404_03740 IPR016167 FAD-binding, type PCMH, subdomain 1 H5404_03740 IPR016169 FAD-binding, type PCMH, subdomain 2 H5404_03740 IPR006093 Oxygen oxidoreductase covalent FAD-binding site H5404_03740 IPR016166 FAD-binding domain, PCMH-type H5404_03740 IPR016164 FAD-linked oxidase-like, C-terminal H5404_03740 IPR036318 FAD-binding, type PCMH-like superfamily H5404_03745 IPR017871 ABC transporter, conserved site H5404_03745 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_03745 IPR003439 ABC transporter-like H5404_03745 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type H5404_03745 IPR003593 AAA+ ATPase domain H5404_03750 IPR018313 Solute-binding protein family 3, conserved site H5404_03750 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF H5404_03750 IPR001320 Ionotropic glutamate receptor H5404_03750 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter H5404_03755 IPR035906 MetI-like superfamily H5404_03755 IPR000515 ABC transporter type 1, transmembrane domain MetI-like H5404_03755 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain H5404_03760 IPR000515 ABC transporter type 1, transmembrane domain MetI-like H5404_03760 IPR035906 MetI-like superfamily H5404_03760 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain H5404_03770 IPR000847 Transcription regulator HTH, LysR H5404_03770 IPR036390 Winged helix DNA-binding domain superfamily H5404_03770 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_03770 IPR005119 LysR, substrate-binding H5404_03775 IPR036282 Glutathione S-transferase, C-terminal domain superfamily H5404_03775 IPR004046 Glutathione S-transferase, C-terminal H5404_03775 IPR004045 Glutathione S-transferase, N-terminal H5404_03775 IPR040079 Glutathione Transferase family H5404_03775 IPR034341 Stringent starvation protein A, N-terminal H5404_03775 IPR010987 Glutathione S-transferase, C-terminal-like H5404_03775 IPR036249 Thioredoxin-like superfamily H5404_03780 IPR040156 Electron transfer flavoprotein-ubiquinone oxidoreductase H5404_03780 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain H5404_03780 IPR036188 FAD/NAD(P)-binding domain superfamily H5404_03785 IPR011053 Single hybrid motif H5404_03785 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily H5404_03785 IPR036625 E3-binding domain superfamily H5404_03785 IPR004167 Peripheral subunit-binding domain H5404_03785 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain H5404_03785 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site H5404_03785 IPR000089 Biotin/lipoyl attachment H5404_03790 IPR005475 Transketolase-like, pyrimidine-binding domain H5404_03790 IPR033248 Transketolase, C-terminal domain H5404_03790 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II H5404_03790 IPR029061 Thiamin diphosphate-binding fold H5404_03795 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha H5404_03795 IPR001017 Dehydrogenase, E1 component H5404_03795 IPR029061 Thiamin diphosphate-binding fold H5404_03810 IPR013126 Heat shock protein 70 family H5404_03810 IPR042054 YegD-like H5404_03810 IPR018181 Heat shock protein 70, conserved site H5404_03815 IPR007410 Copper chaperone PCuAC H5404_03815 IPR036182 Copper chaperone PCuAC superfamily H5404_03835 IPR002491 ABC transporter periplasmic binding domain H5404_03835 IPR033870 FatB domain H5404_03840 IPR000522 ABC transporter, permease protein, BtuC-like H5404_03840 IPR037294 ABC transporter, BtuC-like H5404_03845 IPR000522 ABC transporter, permease protein, BtuC-like H5404_03845 IPR037294 ABC transporter, BtuC-like H5404_03850 IPR017871 ABC transporter, conserved site H5404_03850 IPR003439 ABC transporter-like H5404_03850 IPR003593 AAA+ ATPase domain H5404_03850 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_03855 IPR000551 MerR-type HTH domain H5404_03855 IPR009061 Putative DNA-binding domain superfamily H5404_03855 IPR011789 Cu(I)-responsive transcriptional regulator H5404_03860 IPR020449 Transcription regulator HTH, AraC- type H5404_03860 IPR018060 DNA binding HTH domain, AraC-type H5404_03860 IPR009057 Homeobox-like domain superfamily H5404_03860 IPR018062 HTH domain AraC-type, conserved site H5404_03865 IPR037066 TonB-dependent receptor, plug domain superfamily H5404_03865 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily H5404_03865 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor H5404_03865 IPR000531 TonB-dependent receptor-like, beta-barrel H5404_03865 IPR039426 Vitamin B12 transporter BtuB-like H5404_03865 IPR012910 TonB-dependent receptor, plug domain H5404_03895 IPR010019 Integral membrane protein, YccS H5404_03895 IPR010020 Integral membrane protein, YccS/YhfK H5404_03895 IPR032692 Integral membrane protein YccS, N-terminal H5404_03900 IPR014017 UvrD-like DNA helicase, C-terminal H5404_03900 IPR014016 UvrD-like helicase, ATP-binding domain H5404_03900 IPR000212 DNA helicase, UvrD/REP type H5404_03900 IPR022161 DNA helicase IV, N-terminal domain H5404_03900 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_03900 IPR034739 UvrD/AddA helicase, N-terminal H5404_03905 IPR004363 Methylglyoxal synthase H5404_03905 IPR018148 Methylglyoxal synthase, active site H5404_03905 IPR011607 Methylglyoxal synthase-like domain H5404_03905 IPR036914 Methylglyoxal synthase-like domain superfamily H5404_03910 IPR001761 Periplasmic binding protein/LacI sugar binding domain H5404_03910 IPR014301 TMAO reductase system, periplasmic protein TorT H5404_03910 IPR028082 Periplasmic binding protein-like I H5404_03915 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily H5404_03915 IPR001789 Signal transduction response regulator, receiver domain H5404_03915 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_03915 IPR038188 TorS, sensor domain superfamily H5404_03915 IPR005467 Histidine kinase domain H5404_03915 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain H5404_03915 IPR003594 Histidine kinase/HSP90-like ATPase H5404_03915 IPR036641 HPT domain superfamily H5404_03915 IPR011006 CheY-like superfamily H5404_03915 IPR037952 Sensor histidine kinase TorS, sensor domain H5404_03915 IPR004358 Signal transduction histidine kinase-related protein, C-terminal H5404_03915 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain H5404_03915 IPR003660 HAMP domain H5404_03930 IPR001867 OmpR/PhoB-type DNA-binding domain H5404_03930 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_03930 IPR039420 Transcriptional regulatory protein WalR-like H5404_03930 IPR001789 Signal transduction response regulator, receiver domain H5404_03930 IPR011006 CheY-like superfamily H5404_03935 IPR000917 Sulfatase, N-terminal H5404_03935 IPR024607 Sulfatase, conserved site H5404_03935 IPR017850 Alkaline-phosphatase-like, core domain superfamily H5404_03935 IPR032158 Domain of unknown function DUF4994 H5404_03940 IPR000917 Sulfatase, N-terminal H5404_03940 IPR024607 Sulfatase, conserved site H5404_03940 IPR017850 Alkaline-phosphatase-like, core domain superfamily H5404_03950 IPR036390 Winged helix DNA-binding domain superfamily H5404_03950 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_03950 IPR000847 Transcription regulator HTH, LysR H5404_03950 IPR005119 LysR, substrate-binding H5404_03955 IPR017850 Alkaline-phosphatase-like, core domain superfamily H5404_03955 IPR024607 Sulfatase, conserved site H5404_03955 IPR000917 Sulfatase, N-terminal H5404_03960 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme H5404_03960 IPR013785 Aldolase-type TIM barrel H5404_03960 IPR023885 4Fe4S-binding SPASM domain H5404_03960 IPR007197 Radical SAM H5404_03965 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_03965 IPR041628 ChlI/MoxR, AAA lid domain H5404_03965 IPR011703 ATPase, AAA-3 H5404_03995 IPR016192 APOBEC/CMP deaminase, zinc-binding H5404_03995 IPR016193 Cytidine deaminase-like H5404_03995 IPR004794 Riboflavin biosynthesis protein RibD H5404_03995 IPR002125 Cytidine and deoxycytidylate deaminase domain H5404_04000 IPR005119 LysR, substrate-binding H5404_04000 IPR036390 Winged helix DNA-binding domain superfamily H5404_04000 IPR000847 Transcription regulator HTH, LysR H5404_04000 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_04005 IPR001206 Diacylglycerol kinase, catalytic domain H5404_04005 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily H5404_04005 IPR005218 Diacylglycerol/lipid kinase H5404_04005 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal H5404_04005 IPR022433 Lipid kinase YegS H5404_04010 IPR016052 Bacteriophage 933W, L0136 H5404_04010 IPR036700 Bacterial OB-fold superfamily H5404_04010 IPR005220 Bacterial OB-fold H5404_04025 IPR023885 4Fe4S-binding SPASM domain H5404_04025 IPR013785 Aldolase-type TIM barrel H5404_04025 IPR034491 Anaerobic Ser-type sulfatase-maturating enzyme H5404_04025 IPR007197 Radical SAM H5404_04035 IPR011856 tRNA endonuclease-like domain superfamily H5404_04035 IPR014883 VRR-NUC domain H5404_04035 IPR040603 Fanconi-associated nuclease 1, SAP domain H5404_04035 IPR033315 Fanconi-associated nuclease 1-like H5404_04050 IPR022919 Peptidase M48, protease HtpX, putative H5404_04050 IPR001915 Peptidase M48 H5404_04055 IPR023353 LemA-like domain superfamily H5404_04055 IPR007156 LemA H5404_04060 IPR018385 C4-dicarboxylate anaerobic carrier-like H5404_04060 IPR004669 C4-dicarboxylate anaerobic carrier H5404_04070 IPR000182 GNAT domain H5404_04070 IPR000905 Gcp-like domain H5404_04070 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB H5404_04070 IPR006464 N-acetyltransferase RimI/Ard1 H5404_04070 IPR016181 Acyl-CoA N-acyltransferase H5404_04080 IPR005467 Histidine kinase domain H5404_04080 IPR011006 CheY-like superfamily H5404_04080 IPR003594 Histidine kinase/HSP90-like ATPase H5404_04080 IPR004358 Signal transduction histidine kinase-related protein, C-terminal H5404_04080 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain H5404_04080 IPR001789 Signal transduction response regulator, receiver domain H5404_04080 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily H5404_04080 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_04085 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 H5404_04085 IPR004839 Aminotransferase, class I/classII H5404_04085 IPR015424 Pyridoxal phosphate-dependent transferase H5404_04085 IPR015421 Pyridoxal phosphate-dependent transferase, major domain H5404_04090 IPR016478 GTPase, MTG1 H5404_04090 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_04090 IPR006073 GTP binding domain H5404_04090 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain H5404_04090 IPR019991 GTP-binding protein, ribosome biogenesis H5404_04090 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily H5404_04100 IPR013661 Peptidase M9, collagenase, N-terminal domain H5404_04100 IPR002169 Peptidase M9A/M9B, collagenase, bacterial H5404_04100 IPR007280 Peptidase, C-terminal, archaeal/bacterial H5404_04110 IPR018060 DNA binding HTH domain, AraC-type H5404_04110 IPR009057 Homeobox-like domain superfamily H5404_04110 IPR020449 Transcription regulator HTH, AraC- type H5404_04110 IPR018062 HTH domain AraC-type, conserved site H5404_04115 IPR005119 LysR, substrate-binding H5404_04115 IPR000847 Transcription regulator HTH, LysR H5404_04115 IPR036390 Winged helix DNA-binding domain superfamily H5404_04115 IPR020890 Transcription regulator HTH, HdfR H5404_04115 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_04135 IPR004846 Type II/III secretion system H5404_04135 IPR014004 Transport-associated and nodulation domain, bacteria H5404_04135 IPR032789 Pilus formation protein, N-terminal H5404_04135 IPR001775 GspD/PilQ family H5404_04135 IPR007055 BON domain H5404_04150 IPR022399 Helicase/secretion neighbourhood ATPase H5404_04150 IPR001482 Type II/IV secretion system protein H5404_04150 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_04185 IPR028974 TSP type-3 repeat H5404_04185 IPR008722 Outer membrane porin F, N-terminal H5404_04185 IPR036737 OmpA-like domain superfamily H5404_04185 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel H5404_04185 IPR006665 OmpA-like domain H5404_04185 IPR006664 Outer membrane protein, bacterial H5404_04185 IPR006690 Outer membrane protein, OmpA-like, conserved site H5404_04195 IPR000847 Transcription regulator HTH, LysR H5404_04195 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_04195 IPR036390 Winged helix DNA-binding domain superfamily H5404_04195 IPR005119 LysR, substrate-binding H5404_04200 IPR036390 Winged helix DNA-binding domain superfamily H5404_04200 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_04200 IPR000847 Transcription regulator HTH, LysR H5404_04200 IPR005119 LysR, substrate-binding H5404_04210 IPR004358 Signal transduction histidine kinase-related protein, C-terminal H5404_04210 IPR001789 Signal transduction response regulator, receiver domain H5404_04210 IPR003594 Histidine kinase/HSP90-like ATPase H5404_04210 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_04210 IPR011006 CheY-like superfamily H5404_04210 IPR005467 Histidine kinase domain H5404_04210 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain H5404_04210 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily H5404_04210 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal H5404_04210 IPR038388 RcsC, C-terminal domain superfamily H5404_04210 IPR030856 Sensor histidine kinase RcsC H5404_04215 IPR000014 PAS domain H5404_04215 IPR000160 GGDEF domain H5404_04215 IPR029787 Nucleotide cyclase H5404_04215 IPR035919 EAL domain superfamily H5404_04215 IPR035965 PAS domain superfamily H5404_04215 IPR005330 MHYT domain H5404_04215 IPR001633 EAL domain H5404_04220 IPR001789 Signal transduction response regulator, receiver domain H5404_04220 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_04220 IPR000792 Transcription regulator LuxR, C-terminal H5404_04220 IPR011006 CheY-like superfamily H5404_04220 IPR016032 Signal transduction response regulator, C-terminal effector H5404_04225 IPR012292 Globin/Protoglobin H5404_04225 IPR009050 Globin-like superfamily H5404_04225 IPR029787 Nucleotide cyclase H5404_04225 IPR000160 GGDEF domain H5404_04225 IPR039435 Diguanylate cyclase DosC, globin sensor domain H5404_04235 IPR000792 Transcription regulator LuxR, C-terminal H5404_04235 IPR001789 Signal transduction response regulator, receiver domain H5404_04235 IPR011006 CheY-like superfamily H5404_04255 IPR001789 Signal transduction response regulator, receiver domain H5404_04255 IPR024181 Chemotaxis response regulator CheV H5404_04255 IPR011006 CheY-like superfamily H5404_04255 IPR002545 CheW-like domain H5404_04255 IPR036061 CheW-like domain superfamily H5404_04270 IPR004626 RarD protein H5404_04270 IPR000620 EamA domain H5404_04280 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily H5404_04280 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase H5404_04290 IPR011096 FTP domain H5404_04290 IPR025711 PepSY domain H5404_04290 IPR007280 Peptidase, C-terminal, archaeal/bacterial H5404_04290 IPR013856 Peptidase M4 domain H5404_04290 IPR001570 Peptidase M4, C-terminal H5404_04290 IPR027268 Peptidase M4/M1, CTD superfamily H5404_04290 IPR023612 Peptidase M4 H5404_04295 IPR000390 Small multidrug resistance protein family H5404_04300 IPR000620 EamA domain H5404_04320 IPR016161 Aldehyde/histidinol dehydrogenase H5404_04320 IPR016162 Aldehyde dehydrogenase, N-terminal H5404_04320 IPR029510 Aldehyde dehydrogenase, glutamic acid active site H5404_04320 IPR016163 Aldehyde dehydrogenase, C-terminal H5404_04320 IPR015590 Aldehyde dehydrogenase domain H5404_04320 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent H5404_04325 IPR001898 Solute carrier family 13 H5404_04325 IPR030676 Citrate carrier CitT-related H5404_04330 IPR005467 Histidine kinase domain H5404_04330 IPR039506 SpoOB, alpha-helical domain H5404_04330 IPR029151 Periplasmic sensor-like domain superfamily H5404_04330 IPR033463 Single cache domain 3 H5404_04330 IPR013767 PAS fold H5404_04330 IPR035965 PAS domain superfamily H5404_04330 IPR000014 PAS domain H5404_04330 IPR004358 Signal transduction histidine kinase-related protein, C-terminal H5404_04330 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_04330 IPR003594 Histidine kinase/HSP90-like ATPase H5404_04330 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB H5404_04335 IPR024187 Signal transduction response regulator, citrate/malate metabolism H5404_04335 IPR028141 Transcriptional regulator H5404_04335 IPR001789 Signal transduction response regulator, receiver domain H5404_04335 IPR011006 CheY-like superfamily H5404_04345 IPR002932 Glutamate synthase domain H5404_04345 IPR024188 Glutamate synthase large subunit-like protein H5404_04345 IPR013785 Aldolase-type TIM barrel H5404_04345 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain H5404_04345 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site H5404_04350 IPR000763 Catalase-peroxidase haem H5404_04350 IPR002016 Haem peroxidase H5404_04350 IPR010255 Haem peroxidase superfamily H5404_04350 IPR019794 Peroxidase, active site H5404_04355 IPR024467 Domain of unknown function DUF2384 H5404_04355 IPR011979 Conserved hypothetical protein CHP02293 H5404_04365 IPR036514 SGNH hydrolase superfamily H5404_04365 IPR002656 Acyltransferase 3 H5404_04375 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal H5404_04375 IPR013785 Aldolase-type TIM barrel H5404_04380 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain H5404_04380 IPR004361 Glyoxalase I H5404_04380 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase H5404_04380 IPR018146 Glyoxalase I, conserved site H5404_04380 IPR037523 Vicinal oxygen chelate (VOC) domain H5404_04400 IPR000644 CBS domain H5404_04400 IPR006668 Magnesium transporter, MgtE intracellular domain H5404_04400 IPR038076 MgtE, N-terminal domain superfamily H5404_04400 IPR038048 Magnesium transporter MgtE, transmembrane domain H5404_04400 IPR006669 Magnesium transporter MgtE H5404_04400 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily H5404_04400 IPR006667 SLC41 divalent cation transporters, integral membrane domain H5404_04420 IPR036821 Peptide deformylase superfamily H5404_04420 IPR023635 Peptide deformylase H5404_04425 IPR009061 Putative DNA-binding domain superfamily H5404_04425 IPR015358 Transcription regulator MerR, DNA binding H5404_04425 IPR000551 MerR-type HTH domain H5404_04425 IPR011789 Cu(I)-responsive transcriptional regulator H5404_04435 IPR036541 Phospholipase A1 superfamily H5404_04435 IPR003187 Phospholipase A1 H5404_04455 IPR011527 ABC transporter type 1, transmembrane domain H5404_04455 IPR036640 ABC transporter type 1, transmembrane domain superfamily H5404_04455 IPR003439 ABC transporter-like H5404_04455 IPR017871 ABC transporter, conserved site H5404_04455 IPR003593 AAA+ ATPase domain H5404_04455 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_04465 IPR040982 DNA polymerase III alpha subunit finger domain H5404_04465 IPR013520 Exonuclease, RNase T/DNA polymerase III H5404_04465 IPR012340 Nucleic acid-binding, OB-fold H5404_04465 IPR004013 PHP domain H5404_04465 IPR029460 DNA polymerase, helix-hairpin-helix motif H5404_04465 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain H5404_04465 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type H5404_04465 IPR036397 Ribonuclease H superfamily H5404_04465 IPR012337 Ribonuclease H-like superfamily H5404_04465 IPR024754 DNA polymerase III polC-like, N-terminal domain II H5404_04465 IPR003141 Polymerase/histidinol phosphatase, N-terminal H5404_04465 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain H5404_04470 IPR005119 LysR, substrate-binding H5404_04470 IPR000847 Transcription regulator HTH, LysR H5404_04470 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_04470 IPR036390 Winged helix DNA-binding domain superfamily H5404_04475 IPR029045 ClpP/crotonase-like domain superfamily H5404_04475 IPR041010 Acetyl-coA carboxylase zinc finger domain H5404_04475 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal H5404_04475 IPR034733 Acetyl-CoA carboxylase H5404_04475 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit H5404_04500 IPR030381 Dynamin-type guanine nucleotide-binding (G) domain H5404_04500 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_04500 IPR022812 Dynamin superfamily H5404_04505 IPR025599 YjcZ-like protein H5404_04510 IPR002641 Patatin-like phospholipase domain H5404_04510 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase H5404_04510 IPR001423 Lysophospholipase patatin, conserved site H5404_04515 IPR000477 Reverse transcriptase domain H5404_04520 IPR001126 UmuC domain H5404_04520 IPR025188 Domain of unknown function DUF4113 H5404_04520 IPR017961 DNA polymerase, Y-family, little finger domain H5404_04520 IPR036775 DNA polymerase, Y-family, little finger domain superfamily H5404_04525 IPR015927 Peptidase S24/S26A/S26B/S26C H5404_04525 IPR039418 LexA-like H5404_04525 IPR036286 LexA/Signal peptidase-like superfamily H5404_04525 IPR006197 Peptidase S24, LexA-like H5404_04555 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic H5404_04555 IPR001989 Radical-activating enzyme, conserved site H5404_04555 IPR013785 Aldolase-type TIM barrel H5404_04555 IPR034457 Organic radical-activating enzymes H5404_04555 IPR007197 Radical SAM H5404_04560 IPR002528 Multi antimicrobial extrusion protein H5404_04565 IPR018060 DNA binding HTH domain, AraC-type H5404_04565 IPR018062 HTH domain AraC-type, conserved site H5404_04565 IPR009057 Homeobox-like domain superfamily H5404_04565 IPR029062 Class I glutamine amidotransferase-like H5404_04565 IPR020449 Transcription regulator HTH, AraC- type H5404_04570 IPR000796 Aspartate/other aminotransferase H5404_04570 IPR015424 Pyridoxal phosphate-dependent transferase H5404_04570 IPR015421 Pyridoxal phosphate-dependent transferase, major domain H5404_04570 IPR004839 Aminotransferase, class I/classII H5404_04570 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 H5404_04575 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX H5404_04575 IPR041107 RimK, PreATP-grasp domain H5404_04575 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK H5404_04575 IPR013815 ATP-grasp fold, subdomain 1 H5404_04575 IPR013651 ATP-grasp fold, RimK-type H5404_04575 IPR021109 Aspartic peptidase domain superfamily H5404_04575 IPR011761 ATP-grasp fold H5404_04585 IPR036700 Bacterial OB-fold superfamily H5404_04585 IPR005220 Bacterial OB-fold H5404_04585 IPR016052 Bacteriophage 933W, L0136 H5404_04590 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_04590 IPR017929 CobB/CobQ glutamine amidotransferase H5404_04590 IPR011698 CobB/CobQ-like glutamine amidotransferase H5404_04590 IPR033949 Cobyric acid synthase, glutamine amidotransferase type 1 H5404_04590 IPR029062 Class I glutamine amidotransferase-like H5404_04590 IPR004459 Cobyric acid synthase CobQ H5404_04595 IPR005950 Molybdate ABC transporter, substrate-binding protein H5404_04600 IPR000515 ABC transporter type 1, transmembrane domain MetI-like H5404_04600 IPR035906 MetI-like superfamily H5404_04600 IPR011867 Molybdate ABC transporter, permease protein H5404_04605 IPR005116 Transport-associated OB, type 1 H5404_04605 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_04605 IPR004606 Molybdenum-pterin binding H5404_04605 IPR011868 Molybdate ABC transporter, ATP-binding protein H5404_04605 IPR008995 Molybdate/tungstate binding, C-terminal H5404_04605 IPR015852 ABC transporter, molybdenum import, ModC H5404_04605 IPR017871 ABC transporter, conserved site H5404_04605 IPR003439 ABC transporter-like H5404_04605 IPR003593 AAA+ ATPase domain H5404_04615 IPR035919 EAL domain superfamily H5404_04615 IPR013515 Phytochrome, central region H5404_04615 IPR001294 Phytochrome H5404_04615 IPR016132 Phytochrome chromophore attachment domain H5404_04615 IPR000160 GGDEF domain H5404_04615 IPR029787 Nucleotide cyclase H5404_04615 IPR029016 GAF-like domain superfamily H5404_04615 IPR003018 GAF domain H5404_04615 IPR001633 EAL domain H5404_04625 IPR029787 Nucleotide cyclase H5404_04625 IPR000160 GGDEF domain H5404_04640 IPR036291 NAD(P)-binding domain superfamily H5404_04640 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal H5404_04640 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 H5404_04640 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 H5404_04640 IPR026255 NAD(P) transhydrogenase, alpha subunit H5404_04640 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain H5404_04640 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal H5404_04645 IPR029035 DHS-like NAD/FAD-binding domain superfamily H5404_04645 IPR034300 NADP transhydrogenase beta-like domain H5404_04645 IPR012136 NADP transhydrogenase, beta subunit H5404_04655 IPR001789 Signal transduction response regulator, receiver domain H5404_04655 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_04655 IPR039420 Transcriptional regulatory protein WalR-like H5404_04655 IPR001867 OmpR/PhoB-type DNA-binding domain H5404_04655 IPR011006 CheY-like superfamily H5404_04670 IPR005371 Uncharacterised protein family UPF0181 H5404_04675 IPR006015 Universal stress protein A family H5404_04675 IPR006016 UspA H5404_04675 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold H5404_04685 IPR036390 Winged helix DNA-binding domain superfamily H5404_04685 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_04685 IPR000847 Transcription regulator HTH, LysR H5404_04685 IPR005119 LysR, substrate-binding H5404_04700 IPR001950 SUI1 domain H5404_04700 IPR005872 Archaeal/bacterial translation initiation factor SUI1 H5404_04700 IPR036877 SUI1 domain superfamily H5404_04710 IPR013815 ATP-grasp fold, subdomain 1 H5404_04710 IPR005905 D-alanine--D-alanine ligase H5404_04710 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site H5404_04710 IPR016185 Pre-ATP-grasp domain superfamily H5404_04710 IPR011761 ATP-grasp fold H5404_04710 IPR011127 D-alanine--D-alanine ligase, N-terminal domain H5404_04710 IPR011095 D-alanine--D-alanine ligase, C-terminal H5404_04720 IPR036291 NAD(P)-binding domain superfamily H5404_04720 IPR000182 GNAT domain H5404_04720 IPR013815 ATP-grasp fold, subdomain 1 H5404_04720 IPR011761 ATP-grasp fold H5404_04720 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain H5404_04720 IPR016181 Acyl-CoA N-acyltransferase H5404_04720 IPR003781 CoA-binding H5404_04720 IPR016102 Succinyl-CoA synthetase-like H5404_04725 IPR000847 Transcription regulator HTH, LysR H5404_04725 IPR005119 LysR, substrate-binding H5404_04725 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_04725 IPR036390 Winged helix DNA-binding domain superfamily H5404_04730 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily H5404_04730 IPR010949 TonB-dependent haemoglobin/transferrin/lactoferrin receptor H5404_04730 IPR000531 TonB-dependent receptor-like, beta-barrel H5404_04730 IPR037066 TonB-dependent receptor, plug domain superfamily H5404_04730 IPR012910 TonB-dependent receptor, plug domain H5404_04730 IPR039426 Vitamin B12 transporter BtuB-like H5404_04735 IPR005886 UDP-glucose 4-epimerase H5404_04735 IPR036291 NAD(P)-binding domain superfamily H5404_04735 IPR016040 NAD(P)-binding domain H5404_04740 IPR029787 Nucleotide cyclase H5404_04740 IPR001610 PAC motif H5404_04740 IPR007895 MASE1 H5404_04740 IPR000014 PAS domain H5404_04740 IPR000700 PAS-associated, C-terminal H5404_04740 IPR000160 GGDEF domain H5404_04740 IPR001633 EAL domain H5404_04740 IPR035965 PAS domain superfamily H5404_04740 IPR013656 PAS fold-4 H5404_04740 IPR013655 PAS fold-3 H5404_04740 IPR035919 EAL domain superfamily H5404_04745 IPR005501 LamB/YcsF/PxpA-like H5404_04745 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel H5404_04750 IPR029000 Cyclophilin-like domain superfamily H5404_04750 IPR003833 Carboxyltransferase domain, subdomain C and D H5404_04750 IPR010016 KipI family H5404_04755 IPR029000 Cyclophilin-like domain superfamily H5404_04755 IPR003778 Carboxyltransferase domain, subdomain A and B H5404_04765 IPR038766 Membrane component of ABC transporter, predicted H5404_04770 IPR017871 ABC transporter, conserved site H5404_04770 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_04770 IPR003439 ABC transporter-like H5404_04770 IPR003593 AAA+ ATPase domain H5404_04775 IPR008265 Lipase, GDSL, active site H5404_04775 IPR036514 SGNH hydrolase superfamily H5404_04775 IPR013830 SGNH hydrolase-type esterase domain H5404_04780 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative H5404_04780 IPR010758 Trans-2-enoyl-CoA reductase H5404_04780 IPR036291 NAD(P)-binding domain superfamily H5404_04780 IPR024906 Enoyl reductase FAD binding domain H5404_04785 IPR000160 GGDEF domain H5404_04785 IPR035919 EAL domain superfamily H5404_04785 IPR005330 MHYT domain H5404_04785 IPR035965 PAS domain superfamily H5404_04785 IPR001633 EAL domain H5404_04785 IPR000014 PAS domain H5404_04785 IPR029787 Nucleotide cyclase H5404_04795 IPR012724 Chaperone DnaJ H5404_04795 IPR018253 DnaJ domain, conserved site H5404_04795 IPR001305 Heat shock protein DnaJ, cysteine-rich domain H5404_04795 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily H5404_04795 IPR036869 Chaperone J-domain superfamily H5404_04795 IPR001623 DnaJ domain H5404_04795 IPR002939 Chaperone DnaJ, C-terminal H5404_04795 IPR008971 HSP40/DnaJ peptide-binding H5404_04820 IPR023767 Transcriptional regulator SgrR H5404_04820 IPR039424 Solute-binding protein family 5 H5404_04820 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain H5404_04820 IPR000914 Solute-binding protein family 5 domain H5404_04830 IPR006683 Thioesterase domain H5404_04830 IPR003736 Phenylacetic acid degradation-related domain H5404_04830 IPR029069 HotDog domain superfamily H5404_04845 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) H5404_04845 IPR042117 OMPP1/FadL/TodX superfamily H5404_04850 IPR020009 Extracellular lipase, Pla-1/cef family H5404_04850 IPR025920 Bacterial virulence factor lipase, N-terminal domain H5404_04850 IPR029058 Alpha/Beta hydrolase fold H5404_04865 IPR022369 Integral membrane protein TerC, riboswitch-linked H5404_04865 IPR005496 Integral membrane protein TerC H5404_04870 IPR029052 Metallo-dependent phosphatase-like H5404_04870 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type H5404_04870 IPR006179 5'-Nucleotidase/apyrase H5404_04870 IPR006146 5'-Nucleotidase, conserved site H5404_04870 IPR036907 5'-Nucleotidase, C-terminal domain superfamily H5404_04870 IPR008334 5'-Nucleotidase, C-terminal H5404_04870 IPR006420 NAD pyrophosphatase/5-nucleotidase NadN H5404_04875 IPR006171 TOPRIM domain H5404_04875 IPR022602 Protein of unknown function DUF2813 H5404_04875 IPR034139 OLD protein-like, TOPRIM domain H5404_04875 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_04880 IPR009476 Protein of unknown function DUF1097 H5404_04885 IPR036390 Winged helix DNA-binding domain superfamily H5404_04885 IPR005119 LysR, substrate-binding H5404_04885 IPR000847 Transcription regulator HTH, LysR H5404_04885 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_04890 IPR023999 Formate transporter FocA, putative H5404_04890 IPR000292 Formate/nitrite transporter H5404_04890 IPR023271 Aquaporin-like H5404_04890 IPR024002 Formate/nitrite transporter, conserved site H5404_04895 IPR023480 Uncharacterised protein family UPF0312/YceI H5404_04895 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily H5404_04895 IPR007372 Lipid/polyisoprenoid-binding, YceI-like H5404_04900 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase H5404_04900 IPR016174 Di-haem cytochrome, transmembrane H5404_04915 IPR001633 EAL domain H5404_04915 IPR035919 EAL domain superfamily H5404_04915 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain H5404_04920 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_04920 IPR011545 DEAD/DEAH box helicase domain H5404_04920 IPR028622 ATP-dependent RNA helicase RhlE H5404_04920 IPR014001 Helicase superfamily 1/2, ATP-binding domain H5404_04920 IPR014014 RNA helicase, DEAD-box type, Q motif H5404_04920 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site H5404_04920 IPR001650 Helicase, C-terminal H5404_04925 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria H5404_04925 IPR007431 Acyl carrier protein phosphodiesterase H5404_04930 IPR029151 Periplasmic sensor-like domain superfamily H5404_04930 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain H5404_04935 IPR023214 HAD superfamily H5404_04935 IPR023198 Phosphoglycolate phosphatase-like, domain 2 H5404_04935 IPR036412 HAD-like superfamily H5404_04935 IPR037512 Phosphoglycolate phosphatase, prokaryotic H5404_04935 IPR006439 HAD hydrolase, subfamily IA H5404_04935 IPR041492 Haloacid dehalogenase-like hydrolase H5404_04940 IPR001789 Signal transduction response regulator, receiver domain H5404_04940 IPR037522 HD-GYP domain H5404_04940 IPR003607 HD/PDEase domain H5404_04940 IPR021800 Domain of unknown function DUF3369 H5404_04940 IPR011006 CheY-like superfamily H5404_04955 IPR029056 Ribokinase-like H5404_04955 IPR011611 Carbohydrate kinase PfkB H5404_04955 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site H5404_04960 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_04960 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site H5404_04960 IPR000559 Formate-tetrahydrofolate ligase, FTHFS H5404_04965 IPR029044 Nucleotide-diphospho-sugar transferases H5404_04965 IPR011004 Trimeric LpxA-like superfamily H5404_04965 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial H5404_04965 IPR005836 ADP-glucose pyrophosphorylase, conserved site H5404_04965 IPR011831 Glucose-1-phosphate adenylyltransferase H5404_04965 IPR005835 Nucleotidyl transferase domain H5404_04970 IPR001223 Glycoside hydrolase family 18, catalytic domain H5404_04970 IPR036573 Carbohydrate-binding module superfamily 5/12 H5404_04970 IPR009470 Chitinase, C-terminal H5404_04970 IPR011583 Chitinase II H5404_04970 IPR029070 Chitinase insertion domain superfamily H5404_04970 IPR003610 Carbohydrate-binding module family 5/12 H5404_04970 IPR013783 Immunoglobulin-like fold H5404_04970 IPR017853 Glycoside hydrolase superfamily H5404_04975 IPR009594 Transcription regulator HTH, AraC, N-terminal H5404_04975 IPR009057 Homeobox-like domain superfamily H5404_04975 IPR018060 DNA binding HTH domain, AraC-type H5404_04980 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA H5404_04980 IPR018211 Alcohol dehydrogenase, iron-type, conserved site H5404_04990 IPR002078 RNA polymerase sigma factor 54 interaction domain H5404_04990 IPR001789 Signal transduction response regulator, receiver domain H5404_04990 IPR002197 DNA binding HTH domain, Fis-type H5404_04990 IPR009057 Homeobox-like domain superfamily H5404_04990 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_04990 IPR025944 Sigma-54 interaction domain, conserved site H5404_04990 IPR011006 CheY-like superfamily H5404_04995 IPR003660 HAMP domain H5404_04995 IPR017116 Signal transduction histidine kinase, PgtB H5404_04995 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily H5404_04995 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain H5404_04995 IPR003594 Histidine kinase/HSP90-like ATPase H5404_04995 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_04995 IPR005467 Histidine kinase domain H5404_05005 IPR011701 Major facilitator superfamily H5404_05005 IPR020846 Major facilitator superfamily domain H5404_05005 IPR021159 Glycerate/sugar phosphate transporter, conserved site H5404_05005 IPR036259 MFS transporter superfamily H5404_05005 IPR000849 Sugar phosphate transporter H5404_05010 IPR040442 Pyruvate kinase-like domain superfamily H5404_05010 IPR011037 Pyruvate kinase-like, insert domain superfamily H5404_05010 IPR015806 Pyruvate kinase, insert domain superfamily H5404_05010 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily H5404_05010 IPR036918 Pyruvate kinase, C-terminal domain superfamily H5404_05010 IPR015795 Pyruvate kinase, C-terminal H5404_05010 IPR015793 Pyruvate kinase, barrel H5404_05010 IPR018209 Pyruvate kinase, active site H5404_05010 IPR001697 Pyruvate kinase H5404_05015 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_05015 IPR017871 ABC transporter, conserved site H5404_05015 IPR003593 AAA+ ATPase domain H5404_05015 IPR003439 ABC transporter-like H5404_05015 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type H5404_05020 IPR035906 MetI-like superfamily H5404_05020 IPR000515 ABC transporter type 1, transmembrane domain MetI-like H5404_05020 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain H5404_05025 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF H5404_05025 IPR018313 Solute-binding protein family 3, conserved site H5404_05025 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter H5404_05025 IPR001320 Ionotropic glutamate receptor H5404_05030 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain H5404_05030 IPR000515 ABC transporter type 1, transmembrane domain MetI-like H5404_05030 IPR035906 MetI-like superfamily H5404_05035 IPR029787 Nucleotide cyclase H5404_05035 IPR001633 EAL domain H5404_05035 IPR013767 PAS fold H5404_05035 IPR035965 PAS domain superfamily H5404_05035 IPR000700 PAS-associated, C-terminal H5404_05035 IPR029016 GAF-like domain superfamily H5404_05035 IPR000160 GGDEF domain H5404_05035 IPR000014 PAS domain H5404_05035 IPR001610 PAC motif H5404_05035 IPR035919 EAL domain superfamily H5404_05035 IPR003018 GAF domain H5404_05050 IPR012781 D-fructose-responsive transcription factor H5404_05050 IPR000843 LacI-type HTH domain H5404_05050 IPR010982 Lambda repressor-like, DNA-binding domain superfamily H5404_05050 IPR001761 Periplasmic binding protein/LacI sugar binding domain H5404_05050 IPR028082 Periplasmic binding protein-like I H5404_05055 IPR016152 Phosphotransferase/anion transporter H5404_05055 IPR002114 Phosphotransferase system, HPr serine phosphorylation site H5404_05055 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site H5404_05055 IPR002178 PTS EIIA type-2 domain H5404_05055 IPR000032 Phosphocarrier protein HPr-like H5404_05055 IPR035895 HPr-like superfamily H5404_05060 IPR029056 Ribokinase-like H5404_05060 IPR017583 Tagatose/fructose phosphokinase H5404_05060 IPR011611 Carbohydrate kinase PfkB H5404_05060 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site H5404_05060 IPR022463 Fructose 1-phosphate kinase H5404_05065 IPR036095 PTS system IIB component-like superfamily H5404_05065 IPR013011 Phosphotransferase system, EIIB component, type 2 H5404_05065 IPR003501 Phosphotransferase system, EIIB component, type 2/3 H5404_05065 IPR003352 Phosphotransferase system, EIIC H5404_05065 IPR013014 Phosphotransferase system, EIIC component, type 2 H5404_05065 IPR003353 Phosphotransferase system, fructose-specific IIB subunit H5404_05065 IPR006327 Phosphotransferase system, fructose IIC component H5404_05075 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains H5404_05075 IPR001036 Acriflavin resistance protein H5404_05085 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain H5404_05085 IPR006143 RND efflux pump, membrane fusion protein H5404_05085 IPR030190 Macrolide export protein MacA H5404_05095 IPR006222 Aminomethyltransferase, folate-binding domain H5404_05095 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain H5404_05095 IPR028896 Aminomethyltransferase-like H5404_05095 IPR022903 Glycine cleavage system T protein, bacteria H5404_05095 IPR006223 Glycine cleavage system T protein H5404_05095 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 H5404_05095 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal H5404_05105 IPR015424 Pyridoxal phosphate-dependent transferase H5404_05105 IPR039429 Serine hydroxymethyltransferase-like domain H5404_05105 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site H5404_05105 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 H5404_05105 IPR001085 Serine hydroxymethyltransferase H5404_05105 IPR015421 Pyridoxal phosphate-dependent transferase, major domain H5404_05110 IPR033753 Glycine cleavage system H-protein/Simiate H5404_05110 IPR002930 Glycine cleavage system H-protein H5404_05110 IPR017453 Glycine cleavage system H-protein, subgroup H5404_05110 IPR011053 Single hybrid motif H5404_05110 IPR000089 Biotin/lipoyl attachment H5404_05115 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 H5404_05115 IPR015424 Pyridoxal phosphate-dependent transferase H5404_05115 IPR015421 Pyridoxal phosphate-dependent transferase, major domain H5404_05115 IPR003437 Glycine dehydrogenase (decarboxylating) H5404_05115 IPR020581 Glycine cleavage system P protein H5404_05120 IPR000477 Reverse transcriptase domain H5404_05135 IPR010982 Lambda repressor-like, DNA-binding domain superfamily H5404_05135 IPR001387 Cro/C1-type helix-turn-helix domain H5404_05145 IPR012893 HipA-like, C-terminal H5404_05145 IPR017508 HipA, N-terminal subdomain 1 H5404_05210 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic H5404_05210 IPR001150 Glycine radical domain H5404_05210 IPR019777 Formate C-acetyltransferase glycine radical, conserved site H5404_05210 IPR005144 ATP-cone domain H5404_05220 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain H5404_05220 IPR006143 RND efflux pump, membrane fusion protein H5404_05225 IPR001036 Acriflavin resistance protein H5404_05225 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 H5404_05225 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains H5404_05235 IPR007272 Sulphur transport domain H5404_05250 IPR023753 FAD/NAD(P)-binding domain H5404_05250 IPR036188 FAD/NAD(P)-binding domain superfamily H5404_05250 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily H5404_05250 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H5404_05250 IPR023536 Coenzyme A disulphide reductase, staphyolococci H5404_05250 IPR017758 Coenzyme A disulphide reductase H5404_05255 IPR009010 Aspartate decarboxylase-like domain superfamily H5404_05255 IPR006656 Molybdopterin oxidoreductase H5404_05255 IPR010046 Oxidoreductase alpha (molybdopterin) subunit H5404_05255 IPR041953 YdeP, molybdopterin-binding oxidoreductase-like domain H5404_05255 IPR037951 YdeP-like, MopB domain H5404_05260 IPR036390 Winged helix DNA-binding domain superfamily H5404_05260 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_05260 IPR000847 Transcription regulator HTH, LysR H5404_05260 IPR005119 LysR, substrate-binding H5404_05265 IPR016193 Cytidine deaminase-like H5404_05265 IPR003786 Sulfur carrier protein FdhD H5404_05270 IPR021159 Glycerate/sugar phosphate transporter, conserved site H5404_05270 IPR000849 Sugar phosphate transporter H5404_05270 IPR020846 Major facilitator superfamily domain H5404_05270 IPR011701 Major facilitator superfamily H5404_05270 IPR036259 MFS transporter superfamily H5404_05275 IPR000792 Transcription regulator LuxR, C-terminal H5404_05275 IPR001789 Signal transduction response regulator, receiver domain H5404_05275 IPR011006 CheY-like superfamily H5404_05275 IPR016032 Signal transduction response regulator, C-terminal effector H5404_05280 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain H5404_05280 IPR007895 MASE1 H5404_05280 IPR005467 Histidine kinase domain H5404_05280 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_05280 IPR003594 Histidine kinase/HSP90-like ATPase H5404_05285 IPR011701 Major facilitator superfamily H5404_05285 IPR000849 Sugar phosphate transporter H5404_05285 IPR021159 Glycerate/sugar phosphate transporter, conserved site H5404_05285 IPR036259 MFS transporter superfamily H5404_05285 IPR020846 Major facilitator superfamily domain H5404_05290 IPR018050 Phosphomannose isomerase, type I, conserved site H5404_05290 IPR011051 RmlC-like cupin domain superfamily H5404_05290 IPR014710 RmlC-like jelly roll fold H5404_05290 IPR001250 Mannose-6-phosphate isomerase, type I H5404_05290 IPR016305 Mannose-6-phosphate isomerase H5404_05310 IPR016039 Thiolase-like H5404_05310 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 H5404_05310 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal H5404_05310 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III H5404_05315 IPR036249 Thioredoxin-like superfamily H5404_05315 IPR017937 Thioredoxin, conserved site H5404_05315 IPR005746 Thioredoxin H5404_05315 IPR013766 Thioredoxin domain H5404_05320 IPR023745 MSF-type transporter, YcaD H5404_05320 IPR011701 Major facilitator superfamily H5404_05320 IPR020846 Major facilitator superfamily domain H5404_05320 IPR036259 MFS transporter superfamily H5404_05325 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain H5404_05325 IPR009057 Homeobox-like domain superfamily H5404_05325 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily H5404_05325 IPR004358 Signal transduction histidine kinase-related protein, C-terminal H5404_05325 IPR001789 Signal transduction response regulator, receiver domain H5404_05325 IPR018060 DNA binding HTH domain, AraC-type H5404_05325 IPR015943 WD40/YVTN repeat-like-containing domain superfamily H5404_05325 IPR018062 HTH domain AraC-type, conserved site H5404_05325 IPR011110 Two component regulator propeller H5404_05325 IPR011006 CheY-like superfamily H5404_05325 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily H5404_05325 IPR013783 Immunoglobulin-like fold H5404_05325 IPR005467 Histidine kinase domain H5404_05325 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_05325 IPR003594 Histidine kinase/HSP90-like ATPase H5404_05325 IPR011123 Two component regulator three Y H5404_05330 IPR002528 Multi antimicrobial extrusion protein H5404_05335 IPR020483 Uncharacterised protein family YgbA H5404_05350 IPR039426 Vitamin B12 transporter BtuB-like H5404_05350 IPR012910 TonB-dependent receptor, plug domain H5404_05350 IPR037066 TonB-dependent receptor, plug domain superfamily H5404_05350 IPR000531 TonB-dependent receptor-like, beta-barrel H5404_05350 IPR010916 TonB box, conserved site H5404_05350 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily H5404_05350 IPR010917 TonB-dependent receptor, conserved site H5404_05350 IPR010105 TonB-dependent siderophore receptor H5404_05360 IPR004668 Anaerobic c4-dicarboxylate membrane transporter H5404_05375 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site H5404_05375 IPR000878 Tetrapyrrole methylase H5404_05375 IPR035996 Tetrapyrrole methylase superfamily H5404_05375 IPR037115 Sirohaem synthase, dimerisation domain superfamily H5404_05375 IPR012409 Sirohaem synthase H5404_05375 IPR014776 Tetrapyrrole methylase, subdomain 2 H5404_05375 IPR006366 Uroporphyrin-III C-methyltransferase H5404_05375 IPR036291 NAD(P)-binding domain superfamily H5404_05375 IPR028281 Siroheme synthase, central domain H5404_05375 IPR019478 Sirohaem synthase, dimerisation domain H5404_05375 IPR014777 Tetrapyrrole methylase, subdomain 1 H5404_05375 IPR006367 Sirohaem synthase, N-terminal H5404_05380 IPR023271 Aquaporin-like H5404_05380 IPR000292 Formate/nitrite transporter H5404_05380 IPR024002 Formate/nitrite transporter, conserved site H5404_05380 IPR023999 Formate transporter FocA, putative H5404_05385 IPR017881 Nitrite reductase (NADH) small subunit H5404_05385 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type H5404_05385 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily H5404_05390 IPR023753 FAD/NAD(P)-binding domain H5404_05390 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain H5404_05390 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal H5404_05390 IPR007419 BFD-like [2Fe-2S]-binding domain H5404_05390 IPR017121 Nitrite reductase [NAD(P)H], large subunit H5404_05390 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB H5404_05390 IPR036188 FAD/NAD(P)-binding domain superfamily H5404_05390 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain H5404_05390 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily H5404_05390 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily H5404_05390 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site H5404_05395 IPR023459 Transcription elongation factor GreA/GreB family H5404_05395 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal H5404_05395 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain H5404_05395 IPR028625 Regulator of nucleoside diphosphate kinase H5404_05395 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily H5404_05430 IPR013766 Thioredoxin domain H5404_05430 IPR036249 Thioredoxin-like superfamily H5404_05430 IPR012336 Thioredoxin-like fold H5404_05430 IPR004670 Na+/H+ antiporter NhaA H5404_05430 IPR023171 Na/H antiporter domain superfamily H5404_05450 IPR017853 Glycoside hydrolase superfamily H5404_05450 IPR013780 Glycosyl hydrolase, all-beta H5404_05450 IPR013776 Alpha-amylase, thermostable H5404_05450 IPR015237 Alpha-amylase C-terminal, prokaryotic H5404_05450 IPR006047 Glycosyl hydrolase, family 13, catalytic domain H5404_05465 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain H5404_05465 IPR004090 Chemotaxis methyl-accepting receptor H5404_05465 IPR003660 HAMP domain H5404_05470 IPR000821 Alanine racemase H5404_05470 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal H5404_05470 IPR011079 Alanine racemase, C-terminal H5404_05470 IPR001608 Alanine racemase, N-terminal H5404_05470 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site H5404_05470 IPR029066 PLP-binding barrel H5404_05485 IPR006094 FAD linked oxidase, N-terminal H5404_05485 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal H5404_05485 IPR016167 FAD-binding, type PCMH, subdomain 1 H5404_05485 IPR012256 D-lactate dehydrogenase H5404_05485 IPR016166 FAD-binding domain, PCMH-type H5404_05485 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 H5404_05485 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 H5404_05485 IPR036318 FAD-binding, type PCMH-like superfamily H5404_05485 IPR016164 FAD-linked oxidase-like, C-terminal H5404_05485 IPR016169 FAD-binding, type PCMH, subdomain 2 H5404_05490 IPR036390 Winged helix DNA-binding domain superfamily H5404_05490 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_05490 IPR005119 LysR, substrate-binding H5404_05490 IPR000847 Transcription regulator HTH, LysR H5404_05505 IPR002035 von Willebrand factor, type A H5404_05505 IPR036465 von Willebrand factor A-like domain superfamily H5404_05505 IPR008912 Uncharacterised protein family CoxE-like H5404_05505 IPR023481 Uncharacterised protein family ViaA H5404_05510 IPR022547 ATPase, RavA, C-terminal H5404_05510 IPR041538 ATPase RavA-like, AAA lid domain H5404_05510 IPR003593 AAA+ ATPase domain H5404_05510 IPR011704 ATPase, dynein-related, AAA domain H5404_05510 IPR023671 ATPase RavA H5404_05510 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_05520 IPR015424 Pyridoxal phosphate-dependent transferase H5404_05520 IPR023603 Threonine aldolase H5404_05520 IPR015421 Pyridoxal phosphate-dependent transferase, major domain H5404_05520 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 H5404_05520 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase H5404_05525 IPR036909 Cytochrome c-like domain superfamily H5404_05525 IPR009056 Cytochrome c-like domain H5404_05525 IPR024167 Cytochrome c4-like H5404_05530 IPR018385 C4-dicarboxylate anaerobic carrier-like H5404_05540 IPR004812 Drug resistance transporter Bcr/CmlA subfamily H5404_05540 IPR020846 Major facilitator superfamily domain H5404_05540 IPR036259 MFS transporter superfamily H5404_05540 IPR005829 Sugar transporter, conserved site H5404_05540 IPR011701 Major facilitator superfamily H5404_05550 IPR000566 Lipocalin/cytosolic fatty-acid binding domain H5404_05550 IPR022272 Lipocalin family conserved site H5404_05550 IPR002446 Lipocalin, bacterial H5404_05550 IPR022271 Lipocalin, ApoD type H5404_05550 IPR012674 Calycin H5404_05570 IPR038729 Rad50/SbcC-type AAA domain H5404_05570 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_05575 IPR029052 Metallo-dependent phosphatase-like H5404_05575 IPR026843 Nuclease SbcCD subunit D, C-terminal domain H5404_05575 IPR041796 Mre11 nuclease, N-terminal metallophosphatase domain H5404_05575 IPR004593 Nuclease SbcCD subunit D H5404_05575 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type H5404_05590 IPR010609 Gp5, C-terminal H5404_05590 IPR006531 Gp5 N-terminal H5404_05590 IPR037026 Vgr protein, OB-fold domain superfamily H5404_05590 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset H5404_05590 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein H5404_05600 IPR003593 AAA+ ATPase domain H5404_05600 IPR003959 ATPase, AAA-type, core H5404_05600 IPR019489 Clp ATPase, C-terminal H5404_05600 IPR036628 Clp, N-terminal domain superfamily H5404_05600 IPR017729 Type VI secretion system, ATPase ClpV1 H5404_05600 IPR001270 ClpA/B family H5404_05600 IPR041546 ClpA/ClpB, AAA lid domain H5404_05600 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_05600 IPR018368 ClpA/B, conserved site 1 H5404_05600 IPR004176 Clp, N-terminal H5404_05610 IPR010272 Type VI secretion system, TssF-like H5404_05625 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath H5404_05630 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath H5404_05635 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 H5404_05645 IPR015655 Protein phosphatase 2C family H5404_05645 IPR036457 PPM-type phosphatase domain superfamily H5404_05645 IPR001932 PPM-type phosphatase domain H5404_05655 IPR010623 Type VI secretion system IcmF, C-terminal H5404_05655 IPR025743 IcmF-related, N-terminal domain H5404_05655 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_05655 IPR017731 Type VI secretion system, IcmF H5404_05655 IPR009612 IcmF-related H5404_05660 IPR036737 OmpA-like domain superfamily H5404_05660 IPR006665 OmpA-like domain H5404_05660 IPR025713 Motility protein B, N-terminal domain H5404_05665 IPR010263 Type VI secretion protein, VC_A0114 H5404_05680 IPR017441 Protein kinase, ATP binding site H5404_05680 IPR000719 Protein kinase domain H5404_05680 IPR011009 Protein kinase-like domain superfamily H5404_05680 IPR008271 Serine/threonine-protein kinase, active site H5404_05680 IPR005543 PASTA domain H5404_05705 IPR001789 Signal transduction response regulator, receiver domain H5404_05705 IPR001054 Adenylyl cyclase class-3/4/guanylyl cyclase H5404_05705 IPR029787 Nucleotide cyclase H5404_05705 IPR011006 CheY-like superfamily H5404_05720 IPR023772 DNA-binding HTH domain, TetR-type, conserved site H5404_05720 IPR013572 Transcription regulator MAATS, C-terminal H5404_05720 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily H5404_05720 IPR001647 DNA-binding HTH domain, TetR-type H5404_05720 IPR009057 Homeobox-like domain superfamily H5404_05735 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain H5404_05735 IPR036188 FAD/NAD(P)-binding domain superfamily H5404_05735 IPR041575 NADH-rubredoxin oxidoreductase, C-terminal H5404_05735 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily H5404_05735 IPR012748 Rieske-like [2Fe-2S] domain, NirD-type H5404_05735 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site H5404_05735 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain H5404_05735 IPR007419 BFD-like [2Fe-2S]-binding domain H5404_05735 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily H5404_05735 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB H5404_05735 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily H5404_05735 IPR023753 FAD/NAD(P)-binding domain H5404_05740 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_05740 IPR003439 ABC transporter-like H5404_05740 IPR017871 ABC transporter, conserved site H5404_05740 IPR005890 Nitrate transport ATP-binding subunit C/D H5404_05740 IPR003593 AAA+ ATPase domain H5404_05745 IPR005889 Nitrate transport permease H5404_05745 IPR035906 MetI-like superfamily H5404_05745 IPR000515 ABC transporter type 1, transmembrane domain MetI-like H5404_05750 IPR029070 Chitinase insertion domain superfamily H5404_05750 IPR006311 Twin-arginine translocation pathway, signal sequence H5404_05755 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_05755 IPR010910 Nitrate/nitrite sensing protein, bacterial H5404_05755 IPR005561 ANTAR domain H5404_05755 IPR011006 CheY-like superfamily H5404_05755 IPR013587 Nitrate/nitrite sensing protein H5404_05760 IPR029058 Alpha/Beta hydrolase fold H5404_05760 IPR002925 Dienelactone hydrolase H5404_05765 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily H5404_05765 IPR017459 Glycosyl transferase family 3, N-terminal domain H5404_05765 IPR000312 Glycosyl transferase, family 3 H5404_05765 IPR005940 Anthranilate phosphoribosyl transferase H5404_05765 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily H5404_05770 IPR006367 Sirohaem synthase, N-terminal H5404_05770 IPR019478 Sirohaem synthase, dimerisation domain H5404_05770 IPR028281 Siroheme synthase, central domain H5404_05770 IPR036291 NAD(P)-binding domain superfamily H5404_05770 IPR012409 Sirohaem synthase H5404_05770 IPR000878 Tetrapyrrole methylase H5404_05770 IPR035996 Tetrapyrrole methylase superfamily H5404_05770 IPR014777 Tetrapyrrole methylase, subdomain 1 H5404_05770 IPR014776 Tetrapyrrole methylase, subdomain 2 H5404_05770 IPR037115 Sirohaem synthase, dimerisation domain superfamily H5404_05770 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site H5404_05770 IPR006366 Uroporphyrin-III C-methyltransferase H5404_05775 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain H5404_05775 IPR006656 Molybdopterin oxidoreductase H5404_05775 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site H5404_05775 IPR009010 Aspartate decarboxylase-like domain superfamily H5404_05775 IPR006657 Molybdopterin dinucleotide-binding domain H5404_05785 IPR004694 Hydroxy amino acid transporter H5404_05785 IPR018227 Amino acid/polyamine transporter 2 H5404_05790 IPR011006 CheY-like superfamily H5404_05790 IPR001789 Signal transduction response regulator, receiver domain H5404_05790 IPR029787 Nucleotide cyclase H5404_05790 IPR000160 GGDEF domain H5404_05800 IPR000209 Peptidase S8/S53 domain H5404_05800 IPR036852 Peptidase S8/S53 domain superfamily H5404_05800 IPR023827 Peptidase S8, subtilisin, Asp-active site H5404_05800 IPR023828 Peptidase S8, subtilisin, Ser-active site H5404_05800 IPR015500 Peptidase S8, subtilisin-related H5404_05800 IPR002884 P domain H5404_05800 IPR008979 Galactose-binding-like domain superfamily H5404_05810 IPR001952 Alkaline phosphatase H5404_05810 IPR017850 Alkaline-phosphatase-like, core domain superfamily H5404_05810 IPR018299 Alkaline phosphatase, active site H5404_05825 IPR001867 OmpR/PhoB-type DNA-binding domain H5404_05825 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_05825 IPR011006 CheY-like superfamily H5404_05825 IPR001789 Signal transduction response regulator, receiver domain H5404_05825 IPR039420 Transcriptional regulatory protein WalR-like H5404_05845 IPR000845 Nucleoside phosphorylase domain H5404_05845 IPR018016 Nucleoside phosphorylase, conserved site H5404_05845 IPR035994 Nucleoside phosphorylase superfamily H5404_05845 IPR010058 Uridine phosphorylase H5404_05850 IPR006419 Nicotinamide mononucleotide transporter PnuC H5404_05860 IPR000843 LacI-type HTH domain H5404_05860 IPR010982 Lambda repressor-like, DNA-binding domain superfamily H5404_05860 IPR028082 Periplasmic binding protein-like I H5404_05865 IPR002139 Ribokinase/fructokinase H5404_05865 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site H5404_05865 IPR029056 Ribokinase-like H5404_05865 IPR011877 Ribokinase H5404_05865 IPR011611 Carbohydrate kinase PfkB H5404_05870 IPR028082 Periplasmic binding protein-like I H5404_05870 IPR025997 Periplasmic binding protein H5404_05875 IPR001851 ABC transporter, permease H5404_05880 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_05880 IPR015861 ABC transporter, ribose import, RbsA H5404_05880 IPR017871 ABC transporter, conserved site H5404_05880 IPR003439 ABC transporter-like H5404_05880 IPR003593 AAA+ ATPase domain H5404_05885 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU H5404_05885 IPR023064 D-ribose pyranase H5404_05885 IPR023750 RbsD-like superfamily H5404_05890 IPR001633 EAL domain H5404_05890 IPR035919 EAL domain superfamily H5404_05890 IPR000160 GGDEF domain H5404_05890 IPR003660 HAMP domain H5404_05890 IPR029787 Nucleotide cyclase H5404_05895 IPR035994 Nucleoside phosphorylase superfamily H5404_05895 IPR000845 Nucleoside phosphorylase domain H5404_05895 IPR010049 MTA/SAH nucleosidase H5404_05935 IPR006694 Fatty acid hydroxylase H5404_05950 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain H5404_05950 IPR003594 Histidine kinase/HSP90-like ATPase H5404_05950 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_05950 IPR011006 CheY-like superfamily H5404_05950 IPR001789 Signal transduction response regulator, receiver domain H5404_05950 IPR004358 Signal transduction histidine kinase-related protein, C-terminal H5404_05950 IPR029151 Periplasmic sensor-like domain superfamily H5404_05950 IPR035965 PAS domain superfamily H5404_05950 IPR015387 LuxQ, periplasmic H5404_05950 IPR005467 Histidine kinase domain H5404_05950 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily H5404_05955 IPR009056 Cytochrome c-like domain H5404_05955 IPR036909 Cytochrome c-like domain superfamily H5404_05955 IPR004852 Di-haem cytochrome c peroxidase H5404_05955 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase H5404_05960 IPR035919 EAL domain superfamily H5404_05960 IPR001633 EAL domain H5404_05960 IPR005330 MHYT domain H5404_05960 IPR000160 GGDEF domain H5404_05960 IPR029787 Nucleotide cyclase H5404_05960 IPR000014 PAS domain H5404_05960 IPR035965 PAS domain superfamily H5404_05970 IPR001107 Band 7 domain H5404_05970 IPR036013 Band 7/SPFH domain superfamily H5404_05970 IPR018080 Band 7/stomatin-like, conserved site H5404_05970 IPR032435 Band 7, C-terminal extension H5404_05970 IPR001972 Stomatin family H5404_05980 IPR033878 Nitroreductase NfsB-like H5404_05980 IPR000415 Nitroreductase-like H5404_05980 IPR029479 Nitroreductase H5404_05985 IPR000644 CBS domain H5404_05985 IPR003439 ABC transporter-like H5404_05985 IPR017871 ABC transporter, conserved site H5404_05985 IPR003593 AAA+ ATPase domain H5404_05985 IPR005892 Glycine betaine transport ATP-binding subunit H5404_05985 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_05990 IPR035906 MetI-like superfamily H5404_05990 IPR000515 ABC transporter type 1, transmembrane domain MetI-like H5404_05995 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain H5404_06000 IPR012132 Glucose-methanol-choline oxidoreductase H5404_06000 IPR027424 Glucose Oxidase, domain 2 H5404_06000 IPR036188 FAD/NAD(P)-binding domain superfamily H5404_06000 IPR011533 Oxygen-dependent choline dehydrogenase H5404_06000 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal H5404_06000 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal H5404_06005 IPR029510 Aldehyde dehydrogenase, glutamic acid active site H5404_06005 IPR016160 Aldehyde dehydrogenase, cysteine active site H5404_06005 IPR011264 Betaine aldehyde dehydrogenase H5404_06005 IPR016163 Aldehyde dehydrogenase, C-terminal H5404_06005 IPR016162 Aldehyde dehydrogenase, N-terminal H5404_06005 IPR016161 Aldehyde/histidinol dehydrogenase H5404_06005 IPR015590 Aldehyde dehydrogenase domain H5404_06010 IPR039538 BetI-type transcriptional repressor, C-terminal H5404_06010 IPR023772 DNA-binding HTH domain, TetR-type, conserved site H5404_06010 IPR001647 DNA-binding HTH domain, TetR-type H5404_06010 IPR009057 Homeobox-like domain superfamily H5404_06010 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily H5404_06010 IPR017757 Transcriptional repressor BetI H5404_06015 IPR033416 Periplasmic sensor domain CHASE7 H5404_06015 IPR029787 Nucleotide cyclase H5404_06015 IPR000160 GGDEF domain H5404_06020 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase H5404_06020 IPR036291 NAD(P)-binding domain superfamily H5404_06020 IPR020904 Short-chain dehydrogenase/reductase, conserved site H5404_06020 IPR002347 Short-chain dehydrogenase/reductase SDR H5404_06025 IPR013328 6-phosphogluconate dehydrogenase, domain 2 H5404_06025 IPR011548 3-hydroxyisobutyrate dehydrogenase H5404_06025 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain H5404_06025 IPR036291 NAD(P)-binding domain superfamily H5404_06025 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily H5404_06025 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site H5404_06025 IPR015815 3-hydroxyisobutyrate dehydrogenase-related H5404_06025 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding H5404_06035 IPR029045 ClpP/crotonase-like domain superfamily H5404_06035 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site H5404_06035 IPR014748 Enoyl-CoA hydratase, C-terminal H5404_06035 IPR001753 Enoyl-CoA hydratase/isomerase H5404_06040 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal H5404_06040 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal H5404_06040 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain H5404_06040 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal H5404_06040 IPR006089 Acyl-CoA dehydrogenase, conserved site H5404_06040 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily H5404_06040 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily H5404_06045 IPR016160 Aldehyde dehydrogenase, cysteine active site H5404_06045 IPR010061 Methylmalonate-semialdehyde dehydrogenase H5404_06045 IPR016162 Aldehyde dehydrogenase, N-terminal H5404_06045 IPR016163 Aldehyde dehydrogenase, C-terminal H5404_06045 IPR016161 Aldehyde/histidinol dehydrogenase H5404_06045 IPR015590 Aldehyde dehydrogenase domain H5404_06050 IPR020613 Thiolase, conserved site H5404_06050 IPR020617 Thiolase, C-terminal H5404_06050 IPR020610 Thiolase, active site H5404_06050 IPR016039 Thiolase-like H5404_06050 IPR002155 Thiolase H5404_06050 IPR020616 Thiolase, N-terminal H5404_06050 IPR020615 Thiolase, acyl-enzyme intermediate active site H5404_06055 IPR009061 Putative DNA-binding domain superfamily H5404_06055 IPR000551 MerR-type HTH domain H5404_06055 IPR015358 Transcription regulator MerR, DNA binding H5404_06055 IPR011789 Cu(I)-responsive transcriptional regulator H5404_06060 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal H5404_06060 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal H5404_06060 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal H5404_06060 IPR006089 Acyl-CoA dehydrogenase, conserved site H5404_06060 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain H5404_06060 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily H5404_06060 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily H5404_06065 IPR034733 Acetyl-CoA carboxylase H5404_06065 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal H5404_06065 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal H5404_06065 IPR029045 ClpP/crotonase-like domain superfamily H5404_06070 IPR014748 Enoyl-CoA hydratase, C-terminal H5404_06070 IPR029045 ClpP/crotonase-like domain superfamily H5404_06070 IPR011968 Phenylacetate degradation probable enoyl-CoA hydratase PaaB H5404_06070 IPR001753 Enoyl-CoA hydratase/isomerase H5404_06075 IPR005481 Biotin carboxylase-like, N-terminal domain H5404_06075 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain H5404_06075 IPR011764 Biotin carboxylation domain H5404_06075 IPR005482 Biotin carboxylase, C-terminal H5404_06075 IPR000089 Biotin/lipoyl attachment H5404_06075 IPR011053 Single hybrid motif H5404_06075 IPR011054 Rudiment single hybrid motif H5404_06075 IPR016185 Pre-ATP-grasp domain superfamily H5404_06075 IPR001882 Biotin-binding site H5404_06075 IPR011761 ATP-grasp fold H5404_06080 IPR013785 Aldolase-type TIM barrel H5404_06080 IPR000138 Hydroxymethylglutaryl-CoA lyase, active site H5404_06080 IPR000891 Pyruvate carboxyltransferase H5404_06085 IPR005467 Histidine kinase domain H5404_06085 IPR001789 Signal transduction response regulator, receiver domain H5404_06085 IPR003594 Histidine kinase/HSP90-like ATPase H5404_06085 IPR004358 Signal transduction histidine kinase-related protein, C-terminal H5404_06085 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain H5404_06085 IPR019247 Histidine kinase BarA, N-terminal H5404_06085 IPR011006 CheY-like superfamily H5404_06085 IPR003660 HAMP domain H5404_06085 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain H5404_06085 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily H5404_06085 IPR036641 HPT domain superfamily H5404_06085 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_06100 IPR006686 Mechanosensitive ion channel MscS, conserved site H5404_06100 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 H5404_06100 IPR023408 Mechanosensitive ion channel MscS domain superfamily H5404_06100 IPR025692 Mechanosensitive ion channel inner membrane domain 1 H5404_06100 IPR024393 Mechanosensitive ion channel MscS, porin domain H5404_06100 IPR006685 Mechanosensitive ion channel MscS H5404_06100 IPR010920 LSM domain superfamily H5404_06100 IPR011066 Mechanosensitive ion channel MscS, C-terminal H5404_06105 IPR011004 Trimeric LpxA-like superfamily H5404_06105 IPR001451 Hexapeptide repeat H5404_06105 IPR018357 Hexapeptide transferase, conserved site H5404_06105 IPR024688 Maltose/galactoside acetyltransferase H5404_06110 IPR004839 Aminotransferase, class I/classII H5404_06110 IPR015424 Pyridoxal phosphate-dependent transferase H5404_06110 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 H5404_06110 IPR015421 Pyridoxal phosphate-dependent transferase, major domain H5404_06110 IPR000524 Transcription regulator HTH, GntR H5404_06110 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_06110 IPR036390 Winged helix DNA-binding domain superfamily H5404_06115 IPR002585 Cytochrome ubiquinol oxidase subunit 1 H5404_06120 IPR003317 Cytochrome ubiquinol oxidase subunit 2 H5404_06130 IPR003719 Phenazine biosynthesis PhzF protein H5404_06135 IPR029032 AhpD-like H5404_06135 IPR003779 Carboxymuconolactone decarboxylase-like H5404_06135 IPR012788 4-carboxymuconolactone decarboxylase H5404_06140 IPR009061 Putative DNA-binding domain superfamily H5404_06140 IPR000551 MerR-type HTH domain H5404_06150 IPR009056 Cytochrome c-like domain H5404_06150 IPR036909 Cytochrome c-like domain superfamily H5404_06150 IPR002327 Cytochrome c, class IA/ IB H5404_06160 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification H5404_06160 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_06160 IPR025835 Thiopurine S-methyltransferase H5404_06160 IPR008854 TPMT family H5404_06165 IPR042099 AMP-dependent synthetase-like superfamily H5404_06165 IPR000873 AMP-dependent synthetase/ligase H5404_06165 IPR011880 Phenylacetate-CoA ligase H5404_06165 IPR028154 AMP-dependent ligase, C-terminal H5404_06170 IPR003439 ABC transporter-like H5404_06170 IPR017871 ABC transporter, conserved site H5404_06170 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_06170 IPR003593 AAA+ ATPase domain H5404_06170 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein H5404_06195 IPR017871 ABC transporter, conserved site H5404_06195 IPR003439 ABC transporter-like H5404_06195 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal H5404_06195 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_06195 IPR003593 AAA+ ATPase domain H5404_06200 IPR036188 FAD/NAD(P)-binding domain superfamily H5404_06200 IPR040156 Electron transfer flavoprotein-ubiquinone oxidoreductase H5404_06200 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain H5404_06205 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold H5404_06205 IPR033948 Electron transfer flavoprotein, beta subunit, N-terminal H5404_06205 IPR012255 Electron transfer flavoprotein, beta subunit H5404_06205 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal H5404_06205 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site H5404_06210 IPR033947 Electron transfer flavoprotein, alpha subunit, N-terminal H5404_06210 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold H5404_06210 IPR029035 DHS-like NAD/FAD-binding domain superfamily H5404_06210 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal H5404_06210 IPR001308 Electron transfer flavoprotein alpha subunit/FixB H5404_06210 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site H5404_06210 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal H5404_06215 IPR005914 Acetoacetyl-CoA synthase H5404_06215 IPR025110 AMP-binding enzyme, C-terminal domain H5404_06215 IPR020845 AMP-binding, conserved site H5404_06215 IPR042099 AMP-dependent synthetase-like superfamily H5404_06215 IPR000873 AMP-dependent synthetase/ligase H5404_06220 IPR015875 IMP dehydrogenase / GMP reductase, conserved site H5404_06220 IPR013785 Aldolase-type TIM barrel H5404_06220 IPR001093 IMP dehydrogenase/GMP reductase H5404_06220 IPR005993 GMP reductase H5404_06225 IPR004443 YjeF N-terminal domain H5404_06225 IPR036652 YjeF N-terminal domain superfamily H5404_06225 IPR029056 Ribokinase-like H5404_06225 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase H5404_06225 IPR017953 Carbohydrate kinase, predicted, conserved site H5404_06225 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr H5404_06235 IPR001789 Signal transduction response regulator, receiver domain H5404_06235 IPR011006 CheY-like superfamily H5404_06240 IPR036812 NADP-dependent oxidoreductase domain superfamily H5404_06240 IPR023210 NADP-dependent oxidoreductase domain H5404_06240 IPR020471 Aldo/keto reductase H5404_06255 IPR001807 Chloride channel, voltage gated H5404_06255 IPR023861 Chloride channel, ClcA H5404_06255 IPR014743 Chloride channel, core H5404_06265 IPR001046 NRAMP family H5404_06270 IPR020602 GTP cyclohydrolase I domain H5404_06270 IPR018234 GTP cyclohydrolase I, conserved site H5404_06270 IPR001474 GTP cyclohydrolase I H5404_06275 IPR005110 MoeA, N-terminal and linker domain H5404_06275 IPR036135 MoeA, N-terminal and linker domain superfamily H5404_06275 IPR038987 Molybdopterin biosynthesis protein MoeA-like H5404_06275 IPR008284 Molybdenum cofactor biosynthesis, conserved site H5404_06275 IPR001453 MoaB/Mog domain H5404_06275 IPR036688 MoeA, C-terminal, domain IV superfamily H5404_06275 IPR005111 MoeA, C-terminal, domain IV H5404_06275 IPR036425 MoaB/Mog-like domain superfamily H5404_06280 IPR000594 THIF-type NAD/FAD binding fold H5404_06280 IPR035985 Ubiquitin-activating enzyme H5404_06280 IPR012730 Molybdopterin synthase sulfurylase MoeB H5404_06300 IPR001763 Rhodanese-like domain H5404_06300 IPR036873 Rhodanese-like domain superfamily H5404_06300 IPR001307 Thiosulphate sulfurtransferase, conserved site H5404_06305 IPR035919 EAL domain superfamily H5404_06305 IPR029787 Nucleotide cyclase H5404_06305 IPR005330 MHYT domain H5404_06305 IPR000160 GGDEF domain H5404_06305 IPR001633 EAL domain H5404_06310 IPR001579 Glycoside hydrolase, chitinase active site H5404_06310 IPR001223 Glycoside hydrolase family 18, catalytic domain H5404_06310 IPR014756 Immunoglobulin E-set H5404_06310 IPR029070 Chitinase insertion domain superfamily H5404_06310 IPR013540 Chitinase A N-terminal H5404_06310 IPR017853 Glycoside hydrolase superfamily H5404_06310 IPR022409 PKD/Chitinase domain H5404_06310 IPR013783 Immunoglobulin-like fold H5404_06310 IPR011583 Chitinase II H5404_06310 IPR003610 Carbohydrate-binding module family 5/12 H5404_06310 IPR002126 Cadherin-like H5404_06310 IPR036573 Carbohydrate-binding module superfamily 5/12 H5404_06320 IPR013785 Aldolase-type TIM barrel H5404_06320 IPR001585 Transaldolase/Fructose-6-phosphate aldolase H5404_06320 IPR004730 Transaldolase type 1 H5404_06320 IPR018225 Transaldolase, active site H5404_06325 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II H5404_06325 IPR005478 Transketolase, bacterial-like H5404_06325 IPR029061 Thiamin diphosphate-binding fold H5404_06325 IPR005475 Transketolase-like, pyrimidine-binding domain H5404_06325 IPR020826 Transketolase binding site H5404_06325 IPR033248 Transketolase, C-terminal domain H5404_06325 IPR033247 Transketolase family H5404_06325 IPR005474 Transketolase, N-terminal H5404_06330 IPR004090 Chemotaxis methyl-accepting receptor H5404_06330 IPR003660 HAMP domain H5404_06330 IPR013655 PAS fold-3 H5404_06330 IPR035965 PAS domain superfamily H5404_06330 IPR000014 PAS domain H5404_06330 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain H5404_06330 IPR001610 PAC motif H5404_06335 IPR036259 MFS transporter superfamily H5404_06335 IPR020846 Major facilitator superfamily domain H5404_06335 IPR011701 Major facilitator superfamily H5404_06340 IPR013785 Aldolase-type TIM barrel H5404_06340 IPR006219 DHAP synthase, class 1 H5404_06340 IPR006218 DAHP synthetase I/KDSA H5404_06345 IPR006665 OmpA-like domain H5404_06345 IPR000498 Outer membrane protein OmpA-like, transmembrane domain H5404_06345 IPR036737 OmpA-like domain superfamily H5404_06345 IPR006690 Outer membrane protein, OmpA-like, conserved site H5404_06345 IPR006664 Outer membrane protein, bacterial H5404_06345 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel H5404_06345 IPR002368 Outer membrane protein, OmpA H5404_06350 IPR036412 HAD-like superfamily H5404_06350 IPR023198 Phosphoglycolate phosphatase-like, domain 2 H5404_06350 IPR023214 HAD superfamily H5404_06350 IPR041492 Haloacid dehalogenase-like hydrolase H5404_06350 IPR006439 HAD hydrolase, subfamily IA H5404_06350 IPR010976 Beta-phosphoglucomutase hydrolase H5404_06355 IPR000352 Peptide chain release factor class I H5404_06360 IPR000727 Target SNARE coiled-coil homology domain H5404_06360 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain H5404_06360 IPR004090 Chemotaxis methyl-accepting receptor H5404_06360 IPR003660 HAMP domain H5404_06360 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain H5404_06365 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains H5404_06365 IPR001036 Acriflavin resistance protein H5404_06365 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 H5404_06370 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain H5404_06370 IPR006143 RND efflux pump, membrane fusion protein H5404_06375 IPR016193 Cytidine deaminase-like H5404_06375 IPR016473 Deoxycytidylate deaminase H5404_06375 IPR016192 APOBEC/CMP deaminase, zinc-binding H5404_06375 IPR015517 Deoxycytidylate deaminase-related H5404_06375 IPR002125 Cytidine and deoxycytidylate deaminase domain H5404_06375 IPR035105 Deoxycytidylate deaminase domain H5404_06380 IPR010161 Peptidase M20B, tripeptide aminopeptidase H5404_06380 IPR011650 Peptidase M20, dimerisation domain H5404_06380 IPR002933 Peptidase M20 H5404_06380 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site H5404_06380 IPR036264 Bacterial exopeptidase dimerisation domain H5404_06395 IPR000792 Transcription regulator LuxR, C-terminal H5404_06395 IPR011006 CheY-like superfamily H5404_06395 IPR016032 Signal transduction response regulator, C-terminal effector H5404_06395 IPR001789 Signal transduction response regulator, receiver domain H5404_06400 IPR029095 NarX-like, N-terminal H5404_06400 IPR005467 Histidine kinase domain H5404_06400 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_06400 IPR003594 Histidine kinase/HSP90-like ATPase H5404_06400 IPR003660 HAMP domain H5404_06400 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing H5404_06400 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain H5404_06400 IPR042295 NarX-like, N-terminal domain superfamily H5404_06405 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site H5404_06405 IPR004496 Ferredoxin-type protein NapF H5404_06405 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain H5404_06415 IPR006657 Molybdopterin dinucleotide-binding domain H5404_06415 IPR010051 Periplasmic nitrate reductase, large subunit H5404_06415 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site H5404_06415 IPR006656 Molybdopterin oxidoreductase H5404_06415 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain H5404_06415 IPR006311 Twin-arginine translocation pathway, signal sequence H5404_06415 IPR041957 Nitrate reductase NapA-like, molybdopterin-binding domain H5404_06415 IPR009010 Aspartate decarboxylase-like domain superfamily H5404_06420 IPR036280 Multiheme cytochrome superfamily H5404_06420 IPR011031 Multihaem cytochrome H5404_06420 IPR005591 Nitrate reductase cytochrome c-type subunit NapB H5404_06425 IPR038266 NapC/NirT cytochrome c superfamily H5404_06425 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT H5404_06425 IPR005126 NapC/NirT cytochrome c, N-terminal H5404_06425 IPR024717 Denitrification system component NapC/NirT/NrfH H5404_06425 IPR036280 Multiheme cytochrome superfamily H5404_06425 IPR011031 Multihaem cytochrome H5404_06435 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain H5404_06435 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I H5404_06435 IPR029058 Alpha/Beta hydrolase fold H5404_06445 IPR020610 Thiolase, active site H5404_06445 IPR002155 Thiolase H5404_06445 IPR016039 Thiolase-like H5404_06445 IPR020615 Thiolase, acyl-enzyme intermediate active site H5404_06445 IPR020616 Thiolase, N-terminal H5404_06445 IPR020613 Thiolase, conserved site H5404_06445 IPR020617 Thiolase, C-terminal H5404_06450 IPR011283 Acetoacetyl-CoA reductase H5404_06450 IPR036291 NAD(P)-binding domain superfamily H5404_06450 IPR020904 Short-chain dehydrogenase/reductase, conserved site H5404_06450 IPR002347 Short-chain dehydrogenase/reductase SDR H5404_06455 IPR001123 Amino acid exporter protein, LeuE-type H5404_06465 IPR005665 Protein-export membrane protein SecF, bacterial H5404_06465 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site H5404_06465 IPR022645 Protein-export membrane protein SecD/SecF, bacterial H5404_06465 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial H5404_06470 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site H5404_06470 IPR005791 Protein translocase subunit SecD H5404_06470 IPR001036 Acriflavin resistance protein H5404_06470 IPR027398 SecD export protein N-terminal TM domain H5404_06470 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial H5404_06470 IPR022645 Protein-export membrane protein SecD/SecF, bacterial H5404_06495 IPR000485 AsnC-type HTH domain H5404_06495 IPR011991 ArsR-like helix-turn-helix domain H5404_06495 IPR019888 Transcription regulator AsnC-type H5404_06495 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_06495 IPR011008 Dimeric alpha-beta barrel H5404_06495 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain H5404_06495 IPR019885 Transcription regulator HTH, AsnC-type, conserved site H5404_06495 IPR036390 Winged helix DNA-binding domain superfamily H5404_06515 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain H5404_06530 IPR028082 Periplasmic binding protein-like I H5404_06530 IPR025997 Periplasmic binding protein H5404_06535 IPR035901 GIY-YIG endonuclease superfamily H5404_06535 IPR000305 GIY-YIG endonuclease H5404_06540 IPR036390 Winged helix DNA-binding domain superfamily H5404_06540 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_06540 IPR007432 Protein of unknown function DUF480 H5404_06550 IPR007458 Protein of unknown function DUF496 H5404_06555 IPR002528 Multi antimicrobial extrusion protein H5404_06560 IPR000683 Oxidoreductase, N-terminal H5404_06560 IPR036291 NAD(P)-binding domain superfamily H5404_06565 IPR003660 HAMP domain H5404_06565 IPR019247 Histidine kinase BarA, N-terminal H5404_06565 IPR011006 CheY-like superfamily H5404_06565 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_06565 IPR003594 Histidine kinase/HSP90-like ATPase H5404_06565 IPR001789 Signal transduction response regulator, receiver domain H5404_06565 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain H5404_06565 IPR004358 Signal transduction histidine kinase-related protein, C-terminal H5404_06565 IPR036641 HPT domain superfamily H5404_06565 IPR005467 Histidine kinase domain H5404_06565 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain H5404_06565 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily H5404_06570 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain H5404_06570 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site H5404_06570 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family H5404_06570 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I H5404_06570 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain H5404_06570 IPR036291 NAD(P)-binding domain superfamily H5404_06585 IPR036390 Winged helix DNA-binding domain superfamily H5404_06585 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_06585 IPR000847 Transcription regulator HTH, LysR H5404_06585 IPR005119 LysR, substrate-binding H5404_06585 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria H5404_06585 IPR017685 HTH-type transcriptional regulator ArgP H5404_06590 IPR011991 ArsR-like helix-turn-helix domain H5404_06590 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain H5404_06590 IPR000485 AsnC-type HTH domain H5404_06590 IPR011008 Dimeric alpha-beta barrel H5404_06590 IPR019888 Transcription regulator AsnC-type H5404_06590 IPR019885 Transcription regulator HTH, AsnC-type, conserved site H5404_06590 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_06590 IPR036390 Winged helix DNA-binding domain superfamily H5404_06595 IPR002293 Amino acid/polyamine transporter I H5404_06600 IPR000524 Transcription regulator HTH, GntR H5404_06600 IPR015421 Pyridoxal phosphate-dependent transferase, major domain H5404_06600 IPR036390 Winged helix DNA-binding domain superfamily H5404_06600 IPR004839 Aminotransferase, class I/classII H5404_06600 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_06600 IPR015424 Pyridoxal phosphate-dependent transferase H5404_06610 IPR000719 Protein kinase domain H5404_06610 IPR004147 UbiB domain H5404_06610 IPR011009 Protein kinase-like domain superfamily H5404_06610 IPR010232 Probable protein kinase UbiB H5404_06615 IPR006668 Magnesium transporter, MgtE intracellular domain H5404_06615 IPR038076 MgtE, N-terminal domain superfamily H5404_06615 IPR038048 Magnesium transporter MgtE, transmembrane domain H5404_06615 IPR006669 Magnesium transporter MgtE H5404_06615 IPR006667 SLC41 divalent cation transporters, integral membrane domain H5404_06615 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily H5404_06615 IPR000644 CBS domain H5404_06620 IPR038271 Purine-cytosine permease superfamily H5404_06620 IPR001248 Purine-cytosine permease H5404_06620 IPR030191 Cytosine permease H5404_06625 IPR011059 Metal-dependent hydrolase, composite domain superfamily H5404_06625 IPR013108 Amidohydrolase 3 H5404_06625 IPR032466 Metal-dependent hydrolase H5404_06635 IPR006674 HD domain H5404_06635 IPR003607 HD/PDEase domain H5404_06645 IPR023727 Lysophospholipid transporter LplT H5404_06645 IPR036259 MFS transporter superfamily H5404_06645 IPR011701 Major facilitator superfamily H5404_06655 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily H5404_06655 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB H5404_06660 IPR000889 Glutathione peroxidase H5404_06660 IPR029759 Glutathione peroxidase active site H5404_06660 IPR036249 Thioredoxin-like superfamily H5404_06675 IPR001853 DSBA-like thioredoxin domain H5404_06675 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL H5404_06675 IPR036249 Thioredoxin-like superfamily H5404_06675 IPR013766 Thioredoxin domain H5404_06690 IPR002347 Short-chain dehydrogenase/reductase SDR H5404_06690 IPR020904 Short-chain dehydrogenase/reductase, conserved site H5404_06690 IPR036291 NAD(P)-binding domain superfamily H5404_06695 IPR011006 CheY-like superfamily H5404_06695 IPR001867 OmpR/PhoB-type DNA-binding domain H5404_06695 IPR016032 Signal transduction response regulator, C-terminal effector H5404_06695 IPR001789 Signal transduction response regulator, receiver domain H5404_06695 IPR039420 Transcriptional regulatory protein WalR-like H5404_06695 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_06700 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_06700 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily H5404_06700 IPR003594 Histidine kinase/HSP90-like ATPase H5404_06700 IPR004358 Signal transduction histidine kinase-related protein, C-terminal H5404_06700 IPR003660 HAMP domain H5404_06700 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain H5404_06700 IPR005467 Histidine kinase domain H5404_06710 IPR033718 Diacylglycerol kinase, prokaryotic H5404_06710 IPR000829 DAGK family H5404_06710 IPR036945 Diacylglycerol kinase (DAGK) superfamily H5404_06715 IPR000917 Sulfatase, N-terminal H5404_06715 IPR040423 Phosphoethanolamine transferase H5404_06715 IPR012549 Phosphoethanolamine transferase, N-terminal H5404_06715 IPR017850 Alkaline-phosphatase-like, core domain superfamily H5404_06720 IPR000683 Oxidoreductase, N-terminal H5404_06720 IPR036291 NAD(P)-binding domain superfamily H5404_06730 IPR011701 Major facilitator superfamily H5404_06730 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG H5404_06730 IPR005829 Sugar transporter, conserved site H5404_06730 IPR004734 Multidrug resistance protein H5404_06730 IPR036259 MFS transporter superfamily H5404_06730 IPR020846 Major facilitator superfamily domain H5404_06745 IPR000835 MarR-type HTH domain H5404_06745 IPR023187 Transcriptional regulator MarR-type, conserved site H5404_06745 IPR036390 Winged helix DNA-binding domain superfamily H5404_06745 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_06755 IPR002641 Patatin-like phospholipase domain H5404_06755 IPR037483 YjjU-like H5404_06755 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase H5404_06760 IPR014710 RmlC-like jelly roll fold H5404_06760 IPR003829 Pirin, N-terminal domain H5404_06760 IPR008778 Pirin, C-terminal domain H5404_06760 IPR012093 Pirin H5404_06760 IPR011051 RmlC-like cupin domain superfamily H5404_06765 IPR012340 Nucleic acid-binding, OB-fold H5404_06765 IPR011129 Cold shock domain H5404_06765 IPR012156 Cold shock, CspA H5404_06765 IPR019844 Cold-shock (CSD) domain H5404_06765 IPR002059 Cold-shock protein, DNA-binding H5404_06780 IPR032466 Metal-dependent hydrolase H5404_06780 IPR006330 Adenosine/adenine deaminase H5404_06780 IPR001365 Adenosine/AMP deaminase domain H5404_06780 IPR028892 Adenine deaminase type 2 H5404_06785 IPR036249 Thioredoxin-like superfamily H5404_06785 IPR013766 Thioredoxin domain H5404_06785 IPR013740 Redoxin H5404_06785 IPR037944 Peroxiredoxin-5-like H5404_06785 IPR002109 Glutaredoxin H5404_06785 IPR011767 Glutaredoxin active site H5404_06795 IPR015956 Penicillin-binding protein, C-terminal domain superfamily H5404_06795 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal H5404_06795 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily H5404_06795 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal H5404_06795 IPR012338 Beta-lactamase/transpeptidase-like H5404_06795 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A H5404_06800 IPR010987 Glutathione S-transferase, C-terminal-like H5404_06800 IPR036282 Glutathione S-transferase, C-terminal domain superfamily H5404_06800 IPR040079 Glutathione Transferase family H5404_06800 IPR004045 Glutathione S-transferase, N-terminal H5404_06800 IPR036249 Thioredoxin-like superfamily H5404_06805 IPR023772 DNA-binding HTH domain, TetR-type, conserved site H5404_06805 IPR004111 Tetracycline repressor TetR, C-terminal H5404_06805 IPR001647 DNA-binding HTH domain, TetR-type H5404_06805 IPR009057 Homeobox-like domain superfamily H5404_06805 IPR003012 Tetracycline transcriptional regulator, TetR H5404_06805 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily H5404_06810 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal H5404_06810 IPR024072 Dihydrofolate reductase-like domain superfamily H5404_06830 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase H5404_06830 IPR020904 Short-chain dehydrogenase/reductase, conserved site H5404_06830 IPR002347 Short-chain dehydrogenase/reductase SDR H5404_06830 IPR036291 NAD(P)-binding domain superfamily H5404_06865 IPR000515 ABC transporter type 1, transmembrane domain MetI-like H5404_06865 IPR035906 MetI-like superfamily H5404_06870 IPR000515 ABC transporter type 1, transmembrane domain MetI-like H5404_06870 IPR035906 MetI-like superfamily H5404_06870 IPR029345 Maltose transport system permease protein MalF, P2 domain H5404_06870 IPR030156 Maltose/maltodextrin transport system permease protein MalF-like H5404_06870 IPR035277 MalF, N-terminal H5404_06875 IPR006061 Solute-binding family 1, conserved site H5404_06875 IPR006059 Bacterial extracellular solute-binding protein H5404_06875 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein H5404_06880 IPR017871 ABC transporter, conserved site H5404_06880 IPR015855 ABC transporter, maltose/maltodextrin import, MalK H5404_06880 IPR008995 Molybdate/tungstate binding, C-terminal H5404_06880 IPR003439 ABC transporter-like H5404_06880 IPR003593 AAA+ ATPase domain H5404_06880 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_06880 IPR013611 Transport-associated OB, type 2 H5404_06885 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ H5404_06885 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase H5404_06885 IPR003362 Bacterial sugar transferase H5404_06900 IPR005702 Exopolysaccharide synthesis protein H5404_06900 IPR032807 Tyrosine kinase, G-rich domain H5404_06900 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_06900 IPR003856 Polysaccharide chain length determinant N-terminal domain H5404_06900 IPR025669 AAA domain H5404_06910 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain H5404_06910 IPR017814 Mycothiol biosynthesis protein, MshA H5404_06910 IPR001296 Glycosyl transferase, family 1 H5404_06940 IPR015947 PUA-like superfamily H5404_06940 IPR007374 ASCH domain H5404_06940 IPR008314 Uncharacterised conserved protein UCP029143 H5404_06945 IPR011075 Tetracyclin repressor-like, C-terminal domain H5404_06945 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily H5404_06945 IPR009057 Homeobox-like domain superfamily H5404_06945 IPR001647 DNA-binding HTH domain, TetR-type H5404_06950 IPR020843 Polyketide synthase, enoylreductase domain H5404_06950 IPR013149 Alcohol dehydrogenase, C-terminal H5404_06950 IPR041694 Oxidoreductase, N-terminal domain H5404_06950 IPR011032 GroES-like superfamily H5404_06950 IPR036291 NAD(P)-binding domain superfamily H5404_06955 IPR034330 Glutathione S-transferases, class Zeta , C-terminal H5404_06955 IPR040079 Glutathione Transferase family H5404_06955 IPR004045 Glutathione S-transferase, N-terminal H5404_06955 IPR005955 Glutathione S-transferases, class Zeta H5404_06955 IPR034333 Glutathione S-transferases, class Zeta , N-terminal H5404_06955 IPR036282 Glutathione S-transferase, C-terminal domain superfamily H5404_06955 IPR036249 Thioredoxin-like superfamily H5404_06955 IPR010987 Glutathione S-transferase, C-terminal-like H5404_06960 IPR040333 Catalase, clade 3 H5404_06960 IPR018028 Catalase, mono-functional, haem-containing H5404_06960 IPR024708 Catalase active site H5404_06960 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 H5404_06960 IPR020835 Catalase superfamily H5404_06960 IPR011614 Catalase core domain H5404_06960 IPR010582 Catalase immune-responsive domain H5404_06960 IPR002226 Catalase haem-binding site H5404_06960 IPR037060 Catalase core domain superfamily H5404_06965 IPR015815 3-hydroxyisobutyrate dehydrogenase-related H5404_06965 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding H5404_06965 IPR013328 6-phosphogluconate dehydrogenase, domain 2 H5404_06965 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily H5404_06965 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site H5404_06965 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain H5404_06965 IPR036291 NAD(P)-binding domain superfamily H5404_06970 IPR006327 Phosphotransferase system, fructose IIC component H5404_06970 IPR013014 Phosphotransferase system, EIIC component, type 2 H5404_06975 IPR036095 PTS system IIB component-like superfamily H5404_06975 IPR013011 Phosphotransferase system, EIIB component, type 2 H5404_06975 IPR003501 Phosphotransferase system, EIIB component, type 2/3 H5404_06975 IPR003353 Phosphotransferase system, fructose-specific IIB subunit H5404_06985 IPR018060 DNA binding HTH domain, AraC-type H5404_06985 IPR018062 HTH domain AraC-type, conserved site H5404_06985 IPR009057 Homeobox-like domain superfamily H5404_06985 IPR020449 Transcription regulator HTH, AraC- type H5404_06990 IPR003353 Phosphotransferase system, fructose-specific IIB subunit H5404_06990 IPR004715 Phosphotransferase system, IIA component fructose subfamily H5404_06990 IPR013014 Phosphotransferase system, EIIC component, type 2 H5404_06990 IPR003501 Phosphotransferase system, EIIB component, type 2/3 H5404_06990 IPR006327 Phosphotransferase system, fructose IIC component H5404_06990 IPR036095 PTS system IIB component-like superfamily H5404_06990 IPR002178 PTS EIIA type-2 domain H5404_06990 IPR016152 Phosphotransferase/anion transporter H5404_06990 IPR013011 Phosphotransferase system, EIIB component, type 2 H5404_06995 IPR014710 RmlC-like jelly roll fold H5404_06995 IPR001250 Mannose-6-phosphate isomerase, type I H5404_06995 IPR016305 Mannose-6-phosphate isomerase H5404_06995 IPR018050 Phosphomannose isomerase, type I, conserved site H5404_06995 IPR011051 RmlC-like cupin domain superfamily H5404_07005 IPR041492 Haloacid dehalogenase-like hydrolase H5404_07005 IPR023214 HAD superfamily H5404_07005 IPR023198 Phosphoglycolate phosphatase-like, domain 2 H5404_07005 IPR006439 HAD hydrolase, subfamily IA H5404_07005 IPR036412 HAD-like superfamily H5404_07010 IPR028871 Blue (type 1) copper protein, binding site H5404_07010 IPR014068 Azurin H5404_07010 IPR008972 Cupredoxin H5404_07010 IPR000923 Blue (type 1) copper domain H5404_07015 IPR001633 EAL domain H5404_07015 IPR035919 EAL domain superfamily H5404_07015 IPR000160 GGDEF domain H5404_07015 IPR005330 MHYT domain H5404_07015 IPR029787 Nucleotide cyclase H5404_07020 IPR004772 TrkH potassium transport family H5404_07020 IPR003445 Cation transporter H5404_07025 IPR006037 Regulator of K+ conductance, C-terminal H5404_07025 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily H5404_07025 IPR036291 NAD(P)-binding domain superfamily H5404_07025 IPR003148 Regulator of K+ conductance, N-terminal H5404_07030 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_07030 IPR039420 Transcriptional regulatory protein WalR-like H5404_07030 IPR001789 Signal transduction response regulator, receiver domain H5404_07030 IPR011006 CheY-like superfamily H5404_07030 IPR001867 OmpR/PhoB-type DNA-binding domain H5404_07035 IPR038318 KdpD, transmembrane domain superfamily H5404_07035 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal H5404_07035 IPR004358 Signal transduction histidine kinase-related protein, C-terminal H5404_07035 IPR025201 Sensor protein KdpD, transmembrane domain H5404_07035 IPR025201 Sensor protein KdpD, transmembrane domain H5404_07035 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily H5404_07035 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain H5404_07035 IPR005467 Histidine kinase domain H5404_07035 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_07035 IPR003594 Histidine kinase/HSP90-like ATPase H5404_07035 IPR029016 GAF-like domain superfamily H5404_07035 IPR003594 Histidine kinase/HSP90-like ATPase H5404_07035 IPR038318 KdpD, transmembrane domain superfamily H5404_07035 IPR029016 GAF-like domain superfamily H5404_07035 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_07035 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily H5404_07035 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain H5404_07035 IPR004358 Signal transduction histidine kinase-related protein, C-terminal H5404_07035 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal H5404_07035 IPR005467 Histidine kinase domain H5404_07040 IPR036640 ABC transporter type 1, transmembrane domain superfamily H5404_07040 IPR003439 ABC transporter-like H5404_07040 IPR017871 ABC transporter, conserved site H5404_07040 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_07040 IPR039421 Type I protein exporter H5404_07040 IPR003593 AAA+ ATPase domain H5404_07040 IPR011527 ABC transporter type 1, transmembrane domain H5404_07045 IPR012910 TonB-dependent receptor, plug domain H5404_07045 IPR037066 TonB-dependent receptor, plug domain superfamily H5404_07045 IPR039423 TonB-dependent receptor-like H5404_07045 IPR000531 TonB-dependent receptor-like, beta-barrel H5404_07045 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily H5404_07045 IPR010917 TonB-dependent receptor, conserved site H5404_07045 IPR010105 TonB-dependent siderophore receptor H5404_07050 IPR003593 AAA+ ATPase domain H5404_07050 IPR003439 ABC transporter-like H5404_07050 IPR017871 ABC transporter, conserved site H5404_07050 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_07055 IPR002491 ABC transporter periplasmic binding domain H5404_07060 IPR000522 ABC transporter, permease protein, BtuC-like H5404_07060 IPR037294 ABC transporter, BtuC-like H5404_07070 IPR006665 OmpA-like domain H5404_07070 IPR000498 Outer membrane protein OmpA-like, transmembrane domain H5404_07070 IPR002368 Outer membrane protein, OmpA H5404_07070 IPR006690 Outer membrane protein, OmpA-like, conserved site H5404_07070 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel H5404_07070 IPR006664 Outer membrane protein, bacterial H5404_07070 IPR036737 OmpA-like domain superfamily H5404_07085 IPR010129 Type I secretion membrane fusion protein, HlyD family H5404_07085 IPR006144 Secretion protein HlyD, conserved site H5404_07090 IPR003593 AAA+ ATPase domain H5404_07090 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_07090 IPR010128 ATPase, type I secretion system, PrtD H5404_07090 IPR017871 ABC transporter, conserved site H5404_07090 IPR003439 ABC transporter-like H5404_07090 IPR011527 ABC transporter type 1, transmembrane domain H5404_07090 IPR036640 ABC transporter type 1, transmembrane domain superfamily H5404_07100 IPR016032 Signal transduction response regulator, C-terminal effector H5404_07100 IPR000792 Transcription regulator LuxR, C-terminal H5404_07100 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_07105 IPR016032 Signal transduction response regulator, C-terminal effector H5404_07105 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_07105 IPR000792 Transcription regulator LuxR, C-terminal H5404_07115 IPR033479 Double Cache domain 1 H5404_07115 IPR003660 HAMP domain H5404_07115 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain H5404_07120 IPR041628 ChlI/MoxR, AAA lid domain H5404_07120 IPR011703 ATPase, AAA-3 H5404_07120 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_07125 IPR002881 Domain of unknown function DUF58 H5404_07125 IPR036465 von Willebrand factor A-like domain superfamily H5404_07135 IPR022933 Uncharacterised protein family UPF0353 H5404_07135 IPR036465 von Willebrand factor A-like domain superfamily H5404_07135 IPR002035 von Willebrand factor, type A H5404_07140 IPR022933 Uncharacterised protein family UPF0353 H5404_07140 IPR024163 Aerotolerance regulator, N-terminal H5404_07140 IPR036465 von Willebrand factor A-like domain superfamily H5404_07140 IPR002035 von Willebrand factor, type A H5404_07155 IPR003593 AAA+ ATPase domain H5404_07155 IPR003439 ABC transporter-like H5404_07155 IPR017871 ABC transporter, conserved site H5404_07155 IPR005670 Phosphate transport system permease protein 1 H5404_07155 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_07155 IPR015850 ABC transporter, phosphate import, PstB H5404_07160 IPR005672 Phosphate transport system permease protein PstA H5404_07160 IPR035906 MetI-like superfamily H5404_07160 IPR000515 ABC transporter type 1, transmembrane domain MetI-like H5404_07165 IPR011864 Phosphate ABC transporter, permease protein PstC H5404_07165 IPR000515 ABC transporter type 1, transmembrane domain MetI-like H5404_07165 IPR035906 MetI-like superfamily H5404_07170 IPR024370 PBP domain H5404_07175 IPR004090 Chemotaxis methyl-accepting receptor H5404_07175 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain H5404_07175 IPR003660 HAMP domain H5404_07195 IPR037066 TonB-dependent receptor, plug domain superfamily H5404_07195 IPR012910 TonB-dependent receptor, plug domain H5404_07195 IPR000531 TonB-dependent receptor-like, beta-barrel H5404_07195 IPR010916 TonB box, conserved site H5404_07195 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily H5404_07195 IPR010917 TonB-dependent receptor, conserved site H5404_07195 IPR039426 Vitamin B12 transporter BtuB-like H5404_07200 IPR002471 Peptidase S9, serine active site H5404_07200 IPR002470 Peptidase S9A, prolyl oligopeptidase H5404_07200 IPR023302 Peptidase S9A, N-terminal domain H5404_07200 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain H5404_07200 IPR029058 Alpha/Beta hydrolase fold H5404_07205 IPR001650 Helicase, C-terminal H5404_07205 IPR011545 DEAD/DEAH box helicase domain H5404_07205 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_07205 IPR028621 ATP-dependent RNA helicase SrmB H5404_07205 IPR014001 Helicase superfamily 1/2, ATP-binding domain H5404_07205 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site H5404_07205 IPR014014 RNA helicase, DEAD-box type, Q motif H5404_07215 IPR005490 L,D-transpeptidase catalytic domain H5404_07215 IPR018392 LysM domain H5404_07215 IPR038063 L,D-transpeptidase catalytic domain-like H5404_07215 IPR041597 L,D-transpeptidase C-terminal domain H5404_07220 IPR002081 Cryptochrome/DNA photolyase class 1 H5404_07220 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain H5404_07220 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily H5404_07220 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal H5404_07220 IPR006050 DNA photolyase, N-terminal H5404_07220 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold H5404_07220 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily H5404_07225 IPR009061 Putative DNA-binding domain superfamily H5404_07225 IPR000551 MerR-type HTH domain H5404_07230 IPR013560 Domain of unknown function DUF1722 H5404_07235 IPR035994 Nucleoside phosphorylase superfamily H5404_07235 IPR000845 Nucleoside phosphorylase domain H5404_07235 IPR004402 Purine nucleoside phosphorylase DeoD-type H5404_07250 IPR029787 Nucleotide cyclase H5404_07250 IPR000160 GGDEF domain H5404_07255 IPR011223 Uncharacterised conserved protein UCP028770 H5404_07260 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain H5404_07265 IPR009825 ECF transporter, substrate-specific component-like H5404_07265 IPR022914 Protein of unknown function UPF0397 H5404_07270 IPR003593 AAA+ ATPase domain H5404_07270 IPR022216 Putative ABC cobalt transporter H5404_07270 IPR003439 ABC transporter-like H5404_07270 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_07270 IPR017871 ABC transporter, conserved site H5404_07285 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain H5404_07285 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site H5404_07285 IPR011886 Ferredoxin-type protein, NapH/MauN family H5404_07290 IPR006311 Twin-arginine translocation pathway, signal sequence H5404_07290 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site H5404_07290 IPR004494 MauM/NapG ferredoxin-type protein H5404_07290 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain H5404_07295 IPR000182 GNAT domain H5404_07295 IPR016181 Acyl-CoA N-acyltransferase H5404_07310 IPR009875 PilZ domain H5404_07310 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal H5404_07310 IPR012349 FMN-binding split barrel H5404_07315 IPR004090 Chemotaxis methyl-accepting receptor H5404_07315 IPR003660 HAMP domain H5404_07315 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain H5404_07320 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup H5404_07320 IPR020568 Ribosomal protein S5 domain 2-type fold H5404_07320 IPR027065 Lon protease H5404_07320 IPR008269 Peptidase S16, Lon proteolytic domain H5404_07320 IPR041699 Lon protease, AAA domain H5404_07330 IPR003593 AAA+ ATPase domain H5404_07330 IPR003439 ABC transporter-like H5404_07330 IPR017871 ABC transporter, conserved site H5404_07330 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_07330 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal H5404_07335 IPR002470 Peptidase S9A, prolyl oligopeptidase H5404_07335 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain H5404_07335 IPR023302 Peptidase S9A, N-terminal domain H5404_07335 IPR002471 Peptidase S9, serine active site H5404_07335 IPR029058 Alpha/Beta hydrolase fold H5404_07340 IPR005119 LysR, substrate-binding H5404_07340 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_07340 IPR000847 Transcription regulator HTH, LysR H5404_07340 IPR036390 Winged helix DNA-binding domain superfamily H5404_07345 IPR003804 L-lactate permease H5404_07350 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent H5404_07350 IPR000262 FMN-dependent dehydrogenase H5404_07350 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site H5404_07350 IPR020920 L-lactate dehydrogenase, bacterial H5404_07350 IPR037396 FMN hydroxy acid dehydrogenase domain H5404_07350 IPR013785 Aldolase-type TIM barrel H5404_07360 IPR023408 Mechanosensitive ion channel MscS domain superfamily H5404_07360 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 H5404_07360 IPR006686 Mechanosensitive ion channel MscS, conserved site H5404_07360 IPR011066 Mechanosensitive ion channel MscS, C-terminal H5404_07360 IPR006685 Mechanosensitive ion channel MscS H5404_07360 IPR010920 LSM domain superfamily H5404_07365 IPR001148 Alpha carbonic anhydrase domain H5404_07365 IPR036398 Alpha carbonic anhydrase domain superfamily H5404_07365 IPR041891 Carbonic anhydrase, prokaryotic-like H5404_07365 IPR023561 Carbonic anhydrase, alpha-class H5404_07365 IPR018338 Carbonic anhydrase, alpha-class, conserved site H5404_07395 IPR010998 Integrase/recombinase, N-terminal H5404_07395 IPR011010 DNA breaking-rejoining enzyme, catalytic core H5404_07395 IPR013762 Integrase-like, catalytic domain superfamily H5404_07395 IPR002104 Integrase, catalytic domain H5404_07395 IPR022000 Min27-like integrase, DNA-binding domain H5404_07415 IPR004627 L-threonine 3-dehydrogenase H5404_07415 IPR020843 Polyketide synthase, enoylreductase domain H5404_07415 IPR036291 NAD(P)-binding domain superfamily H5404_07415 IPR013154 Alcohol dehydrogenase, N-terminal H5404_07415 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site H5404_07415 IPR011032 GroES-like superfamily H5404_07415 IPR013149 Alcohol dehydrogenase, C-terminal H5404_07420 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 H5404_07420 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site H5404_07420 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase H5404_07420 IPR015424 Pyridoxal phosphate-dependent transferase H5404_07420 IPR015421 Pyridoxal phosphate-dependent transferase, major domain H5404_07420 IPR004839 Aminotransferase, class I/classII H5404_07425 IPR035919 EAL domain superfamily H5404_07425 IPR000160 GGDEF domain H5404_07425 IPR029787 Nucleotide cyclase H5404_07425 IPR005330 MHYT domain H5404_07425 IPR001633 EAL domain H5404_07430 IPR001320 Ionotropic glutamate receptor H5404_07430 IPR018313 Solute-binding protein family 3, conserved site H5404_07430 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF H5404_07435 IPR000192 Aminotransferase class V domain H5404_07435 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site H5404_07435 IPR015424 Pyridoxal phosphate-dependent transferase H5404_07435 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 H5404_07435 IPR015421 Pyridoxal phosphate-dependent transferase, major domain H5404_07440 IPR018152 Superoxide dismutase, copper/zinc, binding site H5404_07440 IPR024134 Superoxide dismutase (Cu/Zn) / superoxide dismutase copper chaperone H5404_07440 IPR001424 Superoxide dismutase, copper/zinc binding domain H5404_07440 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily H5404_07445 IPR011006 CheY-like superfamily H5404_07445 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain H5404_07445 IPR004358 Signal transduction histidine kinase-related protein, C-terminal H5404_07445 IPR013656 PAS fold-4 H5404_07445 IPR005467 Histidine kinase domain H5404_07445 IPR035965 PAS domain superfamily H5404_07445 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily H5404_07445 IPR000700 PAS-associated, C-terminal H5404_07445 IPR001789 Signal transduction response regulator, receiver domain H5404_07445 IPR000014 PAS domain H5404_07445 IPR001610 PAC motif H5404_07445 IPR003594 Histidine kinase/HSP90-like ATPase H5404_07445 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_07450 IPR011006 CheY-like superfamily H5404_07450 IPR016032 Signal transduction response regulator, C-terminal effector H5404_07450 IPR001789 Signal transduction response regulator, receiver domain H5404_07450 IPR039420 Transcriptional regulatory protein WalR-like H5404_07450 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_07450 IPR001867 OmpR/PhoB-type DNA-binding domain H5404_07470 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_07470 IPR000847 Transcription regulator HTH, LysR H5404_07470 IPR036390 Winged helix DNA-binding domain superfamily H5404_07470 IPR005119 LysR, substrate-binding H5404_07475 IPR037478 YwkD-like domain H5404_07475 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain H5404_07475 IPR037523 Vicinal oxygen chelate (VOC) domain H5404_07475 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase H5404_07495 IPR023710 Probable phosphatase YcdX H5404_07495 IPR003141 Polymerase/histidinol phosphatase, N-terminal H5404_07495 IPR016195 Polymerase/histidinol phosphatase-like H5404_07510 IPR005119 LysR, substrate-binding H5404_07510 IPR000847 Transcription regulator HTH, LysR H5404_07510 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_07510 IPR036390 Winged helix DNA-binding domain superfamily H5404_07525 IPR032463 ATPase, type III secretion system, FliI H5404_07525 IPR003593 AAA+ ATPase domain H5404_07525 IPR005714 ATPase, type III secretion system, FliI/YscN H5404_07525 IPR040627 T3SS EscN ATPase, C-terminal H5404_07525 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain H5404_07525 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_07525 IPR020005 Flagellar export ATPase FliI, clade 1 H5404_07525 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site H5404_07535 IPR028263 Flagellar motor switch protein FliG, N-terminal domain H5404_07535 IPR032779 Flagellar motor switch protein FliG, middle domain H5404_07535 IPR011002 Flagellar motor switch protein FliG, alpha-helical H5404_07535 IPR000090 Flagellar motor switch protein FliG H5404_07535 IPR023087 Flagellar motor switch protein FliG, C-terminal H5404_07540 IPR006182 Secretory protein YscJ/FliF H5404_07540 IPR013556 Flagellar M-ring C-terminal H5404_07540 IPR000067 Flagellar M-ring protein FliF H5404_07545 IPR001624 Flagellar hook-basal body complex protein FliE H5404_07550 IPR029995 Transcriptional activator SfnR/FlbD H5404_07550 IPR002078 RNA polymerase sigma factor 54 interaction domain H5404_07550 IPR025944 Sigma-54 interaction domain, conserved site H5404_07550 IPR001789 Signal transduction response regulator, receiver domain H5404_07550 IPR009057 Homeobox-like domain superfamily H5404_07550 IPR003593 AAA+ ATPase domain H5404_07550 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_07550 IPR011006 CheY-like superfamily H5404_07550 IPR002197 DNA binding HTH domain, Fis-type H5404_07550 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 H5404_07550 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 H5404_07565 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb H5404_07565 IPR036429 SpoA-like superfamily H5404_07565 IPR012826 Flagellar motor switch FliN H5404_07565 IPR001543 Surface presentation of antigen (SpoA) H5404_07570 IPR005837 Flagellar transport protein FliP H5404_07570 IPR005838 Type III secretion system inner membrane P protein H5404_07575 IPR002191 Bacterial export protein family 3 H5404_07575 IPR006305 Flagellar biosynthesis protein FliQ H5404_07580 IPR006303 Flagellar biosynthesis protein FliR H5404_07580 IPR002010 Type III secretion system inner membrane R protein H5404_07585 IPR006136 Flagellar biosynthetic protein FlhB H5404_07585 IPR029025 Type III secretion system substrate exporter, C-terminal H5404_07585 IPR006135 Type III secretion system substrate exporter H5404_07590 IPR001712 Type III secretion system FHIPEP H5404_07590 IPR006301 Flagellar biosynthesis protein FlhA H5404_07590 IPR025505 FHIPEP conserved site H5404_07590 IPR042196 FHIPEP, domain 4 H5404_07590 IPR042193 FHIPEP, domain 3 H5404_07590 IPR042194 FHIPEP, domain 1 H5404_07600 IPR042187 Flagellin, C-terminal domain, subdomain 2 H5404_07600 IPR001492 Flagellin H5404_07600 IPR001029 Flagellin, D0/D1 domain H5404_07610 IPR010809 Flagellar hook-associated protein 2, C-terminal H5404_07610 IPR040026 Flagellar hook-associated protein 2 H5404_07610 IPR003481 Flagellar hook-associated protein 2, N-terminal H5404_07610 IPR010810 Flagellin hook, IN motif H5404_07615 IPR036584 Flagellar protein FliS superfamily H5404_07615 IPR003713 Flagellar protein FliS H5404_07630 IPR005503 Flagellar basal body-associated protein FliL H5404_07635 IPR014284 RNA polymerase sigma-70 like domain H5404_07635 IPR013324 RNA polymerase sigma factor, region 3/4-like H5404_07635 IPR013325 RNA polymerase sigma factor, region 2 H5404_07635 IPR012845 RNA polymerase sigma factor, FliA/WhiG H5404_07635 IPR000943 RNA polymerase sigma-70 H5404_07635 IPR007627 RNA polymerase sigma-70 region 2 H5404_07635 IPR007630 RNA polymerase sigma-70 region 4 H5404_07640 IPR002898 MotA/TolQ/ExbB proton channel H5404_07640 IPR022522 Flagellar motor stator, MotA H5404_07640 IPR000540 Flagellar motor protein MotA, conserved site H5404_07645 IPR036737 OmpA-like domain superfamily H5404_07645 IPR025713 Motility protein B, N-terminal domain H5404_07645 IPR006665 OmpA-like domain H5404_07655 IPR012544 Bacterial Pleckstrin homology domain H5404_07655 IPR037063 Bacterial Pleckstrin homology domain superfamily H5404_07675 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family H5404_07675 IPR004184 Pyruvate formate lyase domain H5404_07675 IPR019777 Formate C-acetyltransferase glycine radical, conserved site H5404_07675 IPR001150 Glycine radical domain H5404_07680 IPR034457 Organic radical-activating enzymes H5404_07680 IPR001989 Radical-activating enzyme, conserved site H5404_07680 IPR034465 Pyruvate formate-lyase activase H5404_07680 IPR012839 Organic radical enzyme activase H5404_07680 IPR013785 Aldolase-type TIM barrel H5404_07680 IPR007197 Radical SAM H5404_07685 IPR013785 Aldolase-type TIM barrel H5404_07685 IPR001585 Transaldolase/Fructose-6-phosphate aldolase H5404_07685 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase H5404_07685 IPR018225 Transaldolase, active site H5404_07685 IPR033919 Transaldolase/Fructose-6-phosphate aldolase, archaeal/bacterial H5404_07685 IPR023001 Fructose-6-phosphate aldolase H5404_07695 IPR016181 Acyl-CoA N-acyltransferase H5404_07695 IPR000182 GNAT domain H5404_07705 IPR005829 Sugar transporter, conserved site H5404_07705 IPR023697 Multidrug resistance protein MdtL H5404_07705 IPR036259 MFS transporter superfamily H5404_07705 IPR011701 Major facilitator superfamily H5404_07705 IPR020846 Major facilitator superfamily domain H5404_07710 IPR023746 Transcription regulator HTH, YidZ H5404_07710 IPR036390 Winged helix DNA-binding domain superfamily H5404_07710 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_07710 IPR037402 HTH-type transcriptional regulator YidZ, PBP2 domain H5404_07710 IPR000847 Transcription regulator HTH, LysR H5404_07710 IPR005119 LysR, substrate-binding H5404_07715 IPR000620 EamA domain H5404_07735 IPR039562 Membrane fusion protein, biotin-lipoyl like domain H5404_07735 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA H5404_07735 IPR006143 RND efflux pump, membrane fusion protein H5404_07745 IPR002549 Transmembrane protein TqsA-like H5404_07750 IPR018635 Uncharacterised protein family UPF0319 H5404_07760 IPR017938 Riboflavin synthase-like beta-barrel H5404_07760 IPR001433 Oxidoreductase FAD/NAD(P)-binding H5404_07760 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain H5404_07760 IPR033892 Ferredoxin--NADP reductase, bacteria H5404_07760 IPR017927 FAD-binding domain, ferredoxin reductase-type H5404_07760 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain H5404_07770 IPR036361 SAP domain superfamily H5404_07770 IPR018668 DNA-binding protein VF530-like H5404_07775 IPR036390 Winged helix DNA-binding domain superfamily H5404_07775 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_07775 IPR000847 Transcription regulator HTH, LysR H5404_07775 IPR005119 LysR, substrate-binding H5404_07785 IPR000415 Nitroreductase-like H5404_07785 IPR029479 Nitroreductase H5404_07785 IPR033878 Nitroreductase NfsB-like H5404_07790 IPR009057 Homeobox-like domain superfamily H5404_07790 IPR018060 DNA binding HTH domain, AraC-type H5404_07790 IPR020449 Transcription regulator HTH, AraC- type H5404_07790 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal H5404_07795 IPR031319 Alpha-amylase, C-terminal domain H5404_07795 IPR013783 Immunoglobulin-like fold H5404_07795 IPR002044 Carbohydrate binding module family 20 H5404_07795 IPR006047 Glycosyl hydrolase, family 13, catalytic domain H5404_07795 IPR013780 Glycosyl hydrolase, all-beta H5404_07795 IPR017853 Glycoside hydrolase superfamily H5404_07795 IPR013784 Carbohydrate-binding-like fold H5404_07800 IPR012338 Beta-lactamase/transpeptidase-like H5404_07800 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal H5404_07800 IPR015956 Penicillin-binding protein, C-terminal domain superfamily H5404_07800 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A H5404_07800 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily H5404_07800 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal H5404_07805 IPR000073 Alpha/beta hydrolase fold-1 H5404_07805 IPR029058 Alpha/Beta hydrolase fold H5404_07805 IPR002410 Peptidase S33 H5404_07815 IPR020936 Uncharacterised protein family UPF0176 H5404_07815 IPR001763 Rhodanese-like domain H5404_07815 IPR040503 UPF0176, acylphosphatase-like domain H5404_07815 IPR036873 Rhodanese-like domain superfamily H5404_07820 IPR020879 N-acetylglucosamine-binding protein A H5404_07820 IPR014756 Immunoglobulin E-set H5404_07820 IPR004302 Cellulose/chitin-binding protein, N-terminal H5404_07820 IPR041029 N-acetylglucosamine binding protein A domain 2 H5404_07825 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase H5404_07825 IPR002641 Patatin-like phospholipase domain H5404_07825 IPR037483 YjjU-like H5404_07830 IPR002771 Multiple antibiotic resistance (MarC)-related H5404_07835 IPR000415 Nitroreductase-like H5404_07835 IPR029479 Nitroreductase H5404_07835 IPR016446 Flavin oxidoreductase Frp family H5404_07840 IPR040716 Outer-membrane lipoprotein Wza, C-terminal domain H5404_07840 IPR019554 Soluble ligand binding domain H5404_07840 IPR003715 Polysaccharide export protein H5404_07845 IPR023485 Phosphotyrosine protein phosphatase I H5404_07845 IPR017867 Protein-tyrosine phosphatase, low molecular weight H5404_07845 IPR036196 Phosphotyrosine protein phosphatase I superfamily H5404_07850 IPR005702 Exopolysaccharide synthesis protein H5404_07850 IPR032807 Tyrosine kinase, G-rich domain H5404_07850 IPR003856 Polysaccharide chain length determinant N-terminal domain H5404_07850 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_07850 IPR025669 AAA domain H5404_07860 IPR011008 Dimeric alpha-beta barrel H5404_07860 IPR014910 Putative monooxygenase YdhR H5404_07865 IPR005119 LysR, substrate-binding H5404_07865 IPR000847 Transcription regulator HTH, LysR H5404_07865 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_07865 IPR036390 Winged helix DNA-binding domain superfamily H5404_07875 IPR034703 Proton/glutamate-aspartate symporter GltP H5404_07875 IPR033380 Glutamate-aspartate symport protein GltP/GltT H5404_07875 IPR036458 Sodium:dicarboxylate symporter superfamily H5404_07875 IPR018107 Sodium:dicarboxylate symporter, conserved site H5404_07875 IPR001991 Sodium:dicarboxylate symporter H5404_07880 IPR010652 Domain of unknown function DUF1232 H5404_07885 IPR036264 Bacterial exopeptidase dimerisation domain H5404_07885 IPR011650 Peptidase M20, dimerisation domain H5404_07885 IPR002933 Peptidase M20 H5404_07885 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria H5404_07890 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain H5404_07895 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain H5404_07910 IPR017853 Glycoside hydrolase superfamily H5404_07910 IPR006047 Glycosyl hydrolase, family 13, catalytic domain H5404_07910 IPR014635 Alpha-amylase, MalS type H5404_07915 IPR023346 Lysozyme-like domain superfamily H5404_07915 IPR011812 Biosynthetic peptidoglycan transglycosylase H5404_07915 IPR001264 Glycosyl transferase, family 51 H5404_07915 IPR036950 Penicillin binding protein transglycosylase domain H5404_07920 IPR014756 Immunoglobulin E-set H5404_07920 IPR004193 Glycoside hydrolase, family 13, N-terminal H5404_07920 IPR017853 Glycoside hydrolase superfamily H5404_07920 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta H5404_07920 IPR013783 Immunoglobulin-like fold H5404_07920 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB H5404_07920 IPR006047 Glycosyl hydrolase, family 13, catalytic domain H5404_07920 IPR037439 1,4-alpha-glucan-branching enzyme H5404_07920 IPR013780 Glycosyl hydrolase, all-beta H5404_07925 IPR017853 Glycoside hydrolase superfamily H5404_07925 IPR003385 Glycoside hydrolase, family 77 H5404_07930 IPR011833 Glycogen/starch/alpha-glucan phosphorylase H5404_07930 IPR035090 Phosphorylase pyridoxal-phosphate attachment site H5404_07930 IPR000811 Glycosyl transferase, family 35 H5404_07935 IPR000792 Transcription regulator LuxR, C-terminal H5404_07935 IPR016032 Signal transduction response regulator, C-terminal effector H5404_07935 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_07935 IPR023768 Transcriptional regulator HTH-type, MalT H5404_07935 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_07935 IPR041617 MalT-like TPR region H5404_07935 IPR011990 Tetratricopeptide-like helical domain superfamily H5404_07950 IPR036249 Thioredoxin-like superfamily H5404_07950 IPR003782 Copper chaperone SCO1/SenC H5404_07960 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component H5404_07960 IPR001996 Phosphotransferase system, IIB component, type 1 H5404_07960 IPR013013 Phosphotransferase system, EIIC component, type 1 H5404_07960 IPR003352 Phosphotransferase system, EIIC H5404_07960 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site H5404_07960 IPR036878 Glucose permease domain IIB H5404_07965 IPR004881 Ribosome biogenesis GTPase RsgA H5404_07965 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_07965 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain H5404_07965 IPR010914 RsgA GTPase domain H5404_07970 IPR023025 Serine/threonine transporter SstT H5404_07970 IPR036458 Sodium:dicarboxylate symporter superfamily H5404_07970 IPR001991 Sodium:dicarboxylate symporter H5404_07980 IPR023685 Pyridoxal kinase PdxY H5404_07980 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase H5404_07980 IPR029056 Ribokinase-like H5404_07980 IPR004625 Pyridoxine kinase H5404_07990 IPR002293 Amino acid/polyamine transporter I H5404_07990 IPR004754 Amino acid antiporter H5404_07990 IPR027566 Putrescine transporter PotE H5404_07995 IPR000310 Orn/Lys/Arg decarboxylase, major domain H5404_07995 IPR027464 Ornithine decarboxylase, N-terminal H5404_07995 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal H5404_07995 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily H5404_07995 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal H5404_07995 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 H5404_07995 IPR015421 Pyridoxal phosphate-dependent transferase, major domain H5404_07995 IPR011006 CheY-like superfamily H5404_07995 IPR027568 Ornithine decarboxylase SpeF H5404_07995 IPR015424 Pyridoxal phosphate-dependent transferase H5404_07995 IPR011193 Ornithine/lysine/arginine decarboxylase H5404_08010 IPR017853 Glycoside hydrolase superfamily H5404_08010 IPR013780 Glycosyl hydrolase, all-beta H5404_08010 IPR014756 Immunoglobulin E-set H5404_08010 IPR004193 Glycoside hydrolase, family 13, N-terminal H5404_08010 IPR006047 Glycosyl hydrolase, family 13, catalytic domain H5404_08010 IPR011839 Alpha-1,6-glucosidases, pullulanase-type H5404_08010 IPR005323 Pullulanase, carbohydrate-binding module 41 H5404_08010 IPR024561 Alpha-1,6-glucosidases, pullulanase-type, C-terminal H5404_08010 IPR041111 Pullulanase, Ins domain H5404_08010 IPR040671 Pullulanase, N2 domain H5404_08010 IPR013783 Immunoglobulin-like fold H5404_08010 IPR013784 Carbohydrate-binding-like fold H5404_08015 IPR007346 Endonuclease I H5404_08020 IPR013780 Glycosyl hydrolase, all-beta H5404_08020 IPR013783 Immunoglobulin-like fold H5404_08020 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain H5404_08020 IPR006047 Glycosyl hydrolase, family 13, catalytic domain H5404_08020 IPR017853 Glycoside hydrolase superfamily H5404_08020 IPR032091 Maltogenic Amylase, C-terminal H5404_08035 IPR023738 Maltoporin H5404_08035 IPR036998 Porin, LamB-type superfamily H5404_08035 IPR003192 Porin, LamB-type H5404_08040 IPR011837 Glycogen debranching enzyme, GlgX type H5404_08040 IPR004193 Glycoside hydrolase, family 13, N-terminal H5404_08040 IPR013780 Glycosyl hydrolase, all-beta H5404_08040 IPR006047 Glycosyl hydrolase, family 13, catalytic domain H5404_08040 IPR013783 Immunoglobulin-like fold H5404_08040 IPR014756 Immunoglobulin E-set H5404_08040 IPR017853 Glycoside hydrolase superfamily H5404_08050 IPR038454 DnaA, N-terminal domain superfamily H5404_08050 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_08050 IPR024633 DnaA N-terminal domain H5404_08050 IPR003593 AAA+ ATPase domain H5404_08050 IPR001957 Chromosomal replication control, initiator DnaA H5404_08050 IPR010921 Trp repressor/replication initiator H5404_08050 IPR020591 Chromosomal replication control, initiator DnaA-like H5404_08050 IPR013159 Chromosomal replication initiator, DnaA C-terminal H5404_08050 IPR018312 Chromosomal replication control, initiator DnaA, conserved site H5404_08050 IPR013317 Chromosomal replication initiator protein DnaA H5404_08055 IPR001001 DNA polymerase III, beta sliding clamp H5404_08055 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal H5404_08055 IPR022637 DNA polymerase III, beta sliding clamp, central H5404_08055 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal H5404_08060 IPR003395 RecF/RecN/SMC, N-terminal H5404_08060 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_08060 IPR042174 DNA-binding RecF, domain 2 H5404_08060 IPR018078 DNA-binding, RecF, conserved site H5404_08060 IPR001238 DNA-binding, RecF H5404_08065 IPR018522 DNA topoisomerase, type IIA, conserved site H5404_08065 IPR034160 DNA gyrase subunit B, TOPRIM domain H5404_08065 IPR002288 DNA gyrase B subunit, C-terminal H5404_08065 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal H5404_08065 IPR013760 DNA topoisomerase, type IIA-like domain superfamily H5404_08065 IPR001241 DNA topoisomerase, type IIA H5404_08065 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup H5404_08065 IPR020568 Ribosomal protein S5 domain 2-type fold H5404_08065 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_08065 IPR011557 DNA gyrase, subunit B H5404_08065 IPR003594 Histidine kinase/HSP90-like ATPase H5404_08065 IPR041423 DNA gyrase subunit B insert domain H5404_08065 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 H5404_08065 IPR006171 TOPRIM domain H5404_08075 IPR023728 Small heat shock protein IbpA H5404_08075 IPR002068 Alpha crystallin/Hsp20 domain H5404_08075 IPR037913 Small heat shock protein IbpA/IbpB, ACD domain H5404_08075 IPR008978 HSP20-like chaperone H5404_08080 IPR004839 Aminotransferase, class I/classII H5404_08080 IPR015421 Pyridoxal phosphate-dependent transferase, major domain H5404_08080 IPR015424 Pyridoxal phosphate-dependent transferase H5404_08085 IPR017853 Glycoside hydrolase superfamily H5404_08085 IPR006047 Glycosyl hydrolase, family 13, catalytic domain H5404_08085 IPR014635 Alpha-amylase, MalS type H5404_08090 IPR008909 DALR anticodon binding H5404_08090 IPR015944 Glycine-tRNA ligase, beta subunit H5404_08090 IPR006194 Glycine-tRNA synthetase, heterodimeric H5404_08095 IPR002310 Glycine-tRNA ligase, alpha subunit H5404_08095 IPR006194 Glycine-tRNA synthetase, heterodimeric H5404_08100 IPR001727 Gdt1 family H5404_08110 IPR036868 TusA-like domain superfamily H5404_08110 IPR001455 TusA-like domain H5404_08110 IPR022931 Sulfur carrier protein TusA H5404_08120 IPR000847 Transcription regulator HTH, LysR H5404_08120 IPR037402 HTH-type transcriptional regulator YidZ, PBP2 domain H5404_08120 IPR036390 Winged helix DNA-binding domain superfamily H5404_08120 IPR005119 LysR, substrate-binding H5404_08120 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_08120 IPR023746 Transcription regulator HTH, YidZ H5404_08125 IPR020843 Polyketide synthase, enoylreductase domain H5404_08125 IPR013149 Alcohol dehydrogenase, C-terminal H5404_08125 IPR013154 Alcohol dehydrogenase, N-terminal H5404_08125 IPR011032 GroES-like superfamily H5404_08125 IPR014188 Acrylyl-CoA reductase AcuI H5404_08125 IPR036291 NAD(P)-binding domain superfamily H5404_08130 IPR020613 Thiolase, conserved site H5404_08130 IPR020617 Thiolase, C-terminal H5404_08130 IPR012805 Acetyl-CoA C-acyltransferase FadA H5404_08130 IPR020615 Thiolase, acyl-enzyme intermediate active site H5404_08130 IPR016039 Thiolase-like H5404_08130 IPR002155 Thiolase H5404_08130 IPR020610 Thiolase, active site H5404_08130 IPR020616 Thiolase, N-terminal H5404_08135 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding H5404_08135 IPR036291 NAD(P)-binding domain superfamily H5404_08135 IPR012799 Fatty oxidation complex, alpha subunit FadB H5404_08135 IPR001753 Enoyl-CoA hydratase/isomerase H5404_08135 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site H5404_08135 IPR029045 ClpP/crotonase-like domain superfamily H5404_08135 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily H5404_08135 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal H5404_08140 IPR020568 Ribosomal protein S5 domain 2-type fold H5404_08140 IPR036956 Impact, N-terminal domain superfamily H5404_08140 IPR023582 Impact family H5404_08140 IPR015796 Impact family, bacterial/archaeal H5404_08140 IPR035647 EF-G domain III/V-like H5404_08140 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal H5404_08140 IPR001498 Impact, N-terminal H5404_08140 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site H5404_08145 IPR004772 TrkH potassium transport family H5404_08145 IPR003445 Cation transporter H5404_08150 IPR001226 Flavodoxin, conserved site H5404_08150 IPR008254 Flavodoxin/nitric oxide synthase H5404_08150 IPR029039 Flavoprotein-like superfamily H5404_08150 IPR026816 Flavodoxin domain H5404_08185 IPR036390 Winged helix DNA-binding domain superfamily H5404_08185 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_08185 IPR005119 LysR, substrate-binding H5404_08185 IPR000847 Transcription regulator HTH, LysR H5404_08185 IPR037404 HTH-type transcriptional activator IlvY, PBP2 domain H5404_08190 IPR013328 6-phosphogluconate dehydrogenase, domain 2 H5404_08190 IPR013023 Ketol-acid reductoisomerase H5404_08190 IPR000506 Ketol-acid reductoisomerase, C-terminal H5404_08190 IPR036291 NAD(P)-binding domain superfamily H5404_08190 IPR013116 Ketol-acid reductoisomerase, N-terminal H5404_08190 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily H5404_08195 IPR007475 Ubiquinone biosynthesis accessory factor UbiK H5404_08200 IPR001036 Acriflavin resistance protein H5404_08200 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains H5404_08205 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain H5404_08205 IPR006143 RND efflux pump, membrane fusion protein H5404_08210 IPR023772 DNA-binding HTH domain, TetR-type, conserved site H5404_08210 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily H5404_08210 IPR001647 DNA-binding HTH domain, TetR-type H5404_08210 IPR032551 HTH-type transcriptional repressor, C-terminal H5404_08210 IPR009057 Homeobox-like domain superfamily H5404_08215 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_08215 IPR013986 DExx box DNA helicase domain superfamily H5404_08215 IPR014017 UvrD-like DNA helicase, C-terminal H5404_08215 IPR034739 UvrD/AddA helicase, N-terminal H5404_08215 IPR005752 ATP-dependent DNA helicase Rep H5404_08215 IPR000212 DNA helicase, UvrD/REP type H5404_08215 IPR014016 UvrD-like helicase, ATP-binding domain H5404_08220 IPR009056 Cytochrome c-like domain H5404_08220 IPR036909 Cytochrome c-like domain superfamily H5404_08220 IPR002323 Cytochrome c, class IE H5404_08250 IPR006439 HAD hydrolase, subfamily IA H5404_08250 IPR006549 HAD-superfamily hydrolase,subfamily IIIA H5404_08250 IPR041492 Haloacid dehalogenase-like hydrolase H5404_08250 IPR023214 HAD superfamily H5404_08250 IPR023198 Phosphoglycolate phosphatase-like, domain 2 H5404_08250 IPR023733 Pyrophosphatase PpaX H5404_08250 IPR036412 HAD-like superfamily H5404_08255 IPR003439 ABC transporter-like H5404_08255 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal H5404_08255 IPR003593 AAA+ ATPase domain H5404_08255 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_08255 IPR017871 ABC transporter, conserved site H5404_08260 IPR023765 Solute-binding protein family 5, conserved site H5404_08260 IPR039424 Solute-binding protein family 5 H5404_08260 IPR000914 Solute-binding protein family 5 domain H5404_08260 IPR030678 Peptide/nickel binding protein, MppA-type H5404_08265 IPR035906 MetI-like superfamily H5404_08265 IPR000515 ABC transporter type 1, transmembrane domain MetI-like H5404_08270 IPR025966 Oligopeptide transport permease C-like, N-terminal domain H5404_08270 IPR035906 MetI-like superfamily H5404_08270 IPR000515 ABC transporter type 1, transmembrane domain MetI-like H5404_08300 IPR011009 Protein kinase-like domain superfamily H5404_08300 IPR000719 Protein kinase domain H5404_08300 IPR017441 Protein kinase, ATP binding site H5404_08300 IPR008271 Serine/threonine-protein kinase, active site H5404_08305 IPR010982 Lambda repressor-like, DNA-binding domain superfamily H5404_08305 IPR001761 Periplasmic binding protein/LacI sugar binding domain H5404_08305 IPR028082 Periplasmic binding protein-like I H5404_08305 IPR000843 LacI-type HTH domain H5404_08310 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_08310 IPR000847 Transcription regulator HTH, LysR H5404_08310 IPR005119 LysR, substrate-binding H5404_08310 IPR036390 Winged helix DNA-binding domain superfamily H5404_08315 IPR000390 Small multidrug resistance protein family H5404_08315 IPR023740 Spermidine export protein MdtJ H5404_08320 IPR023737 Spermidine export protein MdtI H5404_08320 IPR000390 Small multidrug resistance protein family H5404_08325 IPR042096 Dihydroxy-acid dehydratase, C-terminal H5404_08325 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase H5404_08325 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site H5404_08325 IPR037237 IlvD/EDD, N-terminal domain H5404_08325 IPR004786 6-phosphogluconate dehydratase H5404_08330 IPR031322 Shikimate kinase/gluconokinase H5404_08330 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_08330 IPR006001 Carbohydrate kinase, thermoresistant glucokinase H5404_08335 IPR003474 Gluconate transporter H5404_08340 IPR013785 Aldolase-type TIM barrel H5404_08340 IPR000887 KDPG/KHG aldolase H5404_08340 IPR031338 KDPG/KHG aldolase, active site 2 H5404_08340 IPR031337 KDPG/KHG aldolase, active site 1 H5404_08345 IPR035994 Nucleoside phosphorylase superfamily H5404_08345 IPR000845 Nucleoside phosphorylase domain H5404_08345 IPR010943 Xanthosine phosphorylase H5404_08345 IPR018099 Purine phosphorylase, family 2, conserved site H5404_08345 IPR011268 Purine nucleoside phosphorylase H5404_08350 IPR005119 LysR, substrate-binding H5404_08350 IPR000847 Transcription regulator HTH, LysR H5404_08350 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_08350 IPR036390 Winged helix DNA-binding domain superfamily H5404_08350 IPR037411 HTH-type transcriptional regulator AlsR, PBP2 domain H5404_08355 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site H5404_08355 IPR036188 FAD/NAD(P)-binding domain superfamily H5404_08355 IPR023753 FAD/NAD(P)-binding domain H5404_08355 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily H5404_08355 IPR006322 Glutathione reductase, eukaryote/bacterial H5404_08355 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I H5404_08355 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H5404_08360 IPR007473 Ribosomal RNA large subunit methyltransferase J H5404_08360 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_08360 IPR002052 DNA methylase, N-6 adenine-specific, conserved site H5404_08365 IPR001567 Peptidase M3A/M3B catalytic domain H5404_08365 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 H5404_08370 IPR011008 Dimeric alpha-beta barrel H5404_08370 IPR000485 AsnC-type HTH domain H5404_08370 IPR019888 Transcription regulator AsnC-type H5404_08370 IPR019885 Transcription regulator HTH, AsnC-type, conserved site H5404_08370 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain H5404_08370 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_08370 IPR011991 ArsR-like helix-turn-helix domain H5404_08370 IPR036390 Winged helix DNA-binding domain superfamily H5404_08375 IPR029787 Nucleotide cyclase H5404_08375 IPR000160 GGDEF domain H5404_08375 IPR035919 EAL domain superfamily H5404_08375 IPR001633 EAL domain H5404_08375 IPR000014 PAS domain H5404_08375 IPR035965 PAS domain superfamily H5404_08375 IPR013656 PAS fold-4 H5404_08380 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_08380 IPR007536 Ribosomal RNA small subunit methyltransferase J H5404_08390 IPR004779 Carboxylate/Amino Acid/Amine Transporter H5404_08390 IPR000620 EamA domain H5404_08395 IPR006016 UspA H5404_08395 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold H5404_08395 IPR006015 Universal stress protein A family H5404_08400 IPR001519 Ferritin H5404_08400 IPR012347 Ferritin-like H5404_08400 IPR041719 Ferritin, prokaryotic-type H5404_08400 IPR009040 Ferritin-like diiron domain H5404_08400 IPR009078 Ferritin-like superfamily H5404_08400 IPR008331 Ferritin/DPS protein domain H5404_08405 IPR019598 Universal stress protein B H5404_08410 IPR004792 3-Dehydro-bile acid delta(4,6)-reductase-like H5404_08410 IPR036188 FAD/NAD(P)-binding domain superfamily H5404_08410 IPR023166 HI0933-like insert domain superfamily H5404_08415 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_08415 IPR003018 GAF domain H5404_08415 IPR029016 GAF-like domain superfamily H5404_08415 IPR002078 RNA polymerase sigma factor 54 interaction domain H5404_08415 IPR025944 Sigma-54 interaction domain, conserved site H5404_08415 IPR003593 AAA+ ATPase domain H5404_08415 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 H5404_08415 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 H5404_08415 IPR009057 Homeobox-like domain superfamily H5404_08415 IPR002197 DNA binding HTH domain, Fis-type H5404_08420 IPR007055 BON domain H5404_08420 IPR014004 Transport-associated and nodulation domain, bacteria H5404_08470 IPR002549 Transmembrane protein TqsA-like H5404_08475 IPR029787 Nucleotide cyclase H5404_08475 IPR005330 MHYT domain H5404_08475 IPR035919 EAL domain superfamily H5404_08475 IPR000160 GGDEF domain H5404_08475 IPR001633 EAL domain H5404_08485 IPR003798 DNA recombination RmuC H5404_08490 IPR023576 UbiE/COQ5 methyltransferase, conserved site H5404_08490 IPR004033 UbiE/COQ5 methyltransferase H5404_08490 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_08495 IPR038989 Ubiquinone biosynthesis protein UbiJ H5404_08495 IPR036527 SCP2 sterol-binding domain superfamily H5404_08495 IPR003033 SCP2 sterol-binding domain H5404_08500 IPR011009 Protein kinase-like domain superfamily H5404_08500 IPR004147 UbiB domain H5404_08500 IPR010232 Probable protein kinase UbiB H5404_08505 IPR006312 Sec-independent protein translocase protein TatA/E H5404_08505 IPR003369 Sec-independent protein translocase protein TatA/B/E H5404_08510 IPR018448 Twin-arginine translocation protein TatB H5404_08510 IPR003369 Sec-independent protein translocase protein TatA/B/E H5404_08515 IPR019820 Sec-independent periplasmic protein translocase, conserved site H5404_08515 IPR002033 Sec-independent periplasmic protein translocase TatC H5404_08520 IPR032466 Metal-dependent hydrolase H5404_08520 IPR015991 Uncharacterised hydrolase TatD-type H5404_08520 IPR018228 Deoxyribonuclease, TatD-related, conserved site H5404_08520 IPR001130 TatD family H5404_08525 IPR001731 Delta-aminolevulinic acid dehydratase H5404_08525 IPR030656 Delta-aminolevulinic acid dehydratase, active site H5404_08525 IPR013785 Aldolase-type TIM barrel H5404_08535 IPR002562 3'-5' exonuclease domain H5404_08535 IPR012337 Ribonuclease H-like superfamily H5404_08535 IPR036397 Ribonuclease H superfamily H5404_08535 IPR008918 Helix-hairpin-helix motif, class 2 H5404_08535 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal H5404_08535 IPR002421 5'-3' exonuclease, N-terminal H5404_08535 IPR036279 5'-3' exonuclease, C-terminal domain superfamily H5404_08535 IPR019760 DNA-directed DNA polymerase, family A, conserved site H5404_08535 IPR020045 DNA polymerase I-like, H3TH domain H5404_08535 IPR018320 DNA polymerase 1 H5404_08535 IPR002298 DNA polymerase A H5404_08535 IPR029060 PIN-like domain superfamily H5404_08535 IPR001098 DNA-directed DNA polymerase, family A, palm domain H5404_08540 IPR030393 EngB-type guanine nucleotide-binding (G) domain H5404_08540 IPR006073 GTP binding domain H5404_08540 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_08540 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC H5404_08545 IPR036909 Cytochrome c-like domain superfamily H5404_08545 IPR024167 Cytochrome c4-like H5404_08545 IPR009056 Cytochrome c-like domain H5404_08555 IPR007336 Der GTPase activator H5404_08560 IPR019617 Domain of unknown function DUF2489 H5404_08565 IPR023404 Radical SAM, alpha/beta horseshoe H5404_08565 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN H5404_08565 IPR007197 Radical SAM H5404_08565 IPR010723 HemN, C-terminal H5404_08565 IPR034505 Anaerobic coproporphyrinogen-III oxidase H5404_08565 IPR006638 Elp3/MiaB/NifB H5404_08570 IPR032466 Metal-dependent hydrolase H5404_08570 IPR006330 Adenosine/adenine deaminase H5404_08570 IPR028893 Adenosine deaminase H5404_08570 IPR001365 Adenosine/AMP deaminase domain H5404_08575 IPR005330 MHYT domain H5404_08575 IPR029787 Nucleotide cyclase H5404_08575 IPR001633 EAL domain H5404_08575 IPR000160 GGDEF domain H5404_08575 IPR035919 EAL domain superfamily H5404_08580 IPR001789 Signal transduction response regulator, receiver domain H5404_08580 IPR025944 Sigma-54 interaction domain, conserved site H5404_08580 IPR010114 DNA-binding transcriptional regulator NtrC H5404_08580 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_08580 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 H5404_08580 IPR002197 DNA binding HTH domain, Fis-type H5404_08580 IPR009057 Homeobox-like domain superfamily H5404_08580 IPR011006 CheY-like superfamily H5404_08580 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 H5404_08580 IPR003593 AAA+ ATPase domain H5404_08580 IPR002078 RNA polymerase sigma factor 54 interaction domain H5404_08585 IPR005467 Histidine kinase domain H5404_08585 IPR003594 Histidine kinase/HSP90-like ATPase H5404_08585 IPR035965 PAS domain superfamily H5404_08585 IPR004358 Signal transduction histidine kinase-related protein, C-terminal H5404_08585 IPR000014 PAS domain H5404_08585 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_08585 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily H5404_08585 IPR013767 PAS fold H5404_08585 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain H5404_08595 IPR008146 Glutamine synthetase, catalytic domain H5404_08595 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain H5404_08595 IPR004809 Glutamine synthetase type I H5404_08595 IPR027303 Glutamine synthetase, glycine-rich site H5404_08595 IPR036651 Glutamine synthetase, N-terminal domain superfamily H5404_08595 IPR027302 Glutamine synthetase, N-terminal conserved site H5404_08595 IPR008147 Glutamine synthetase, beta-Grasp domain H5404_08595 IPR001637 Glutamine synthetase class-I, adenylation site H5404_08600 IPR042116 GTP-binding protein TypA/BipA, C-terminal H5404_08600 IPR005225 Small GTP-binding protein domain H5404_08600 IPR000795 Transcription factor, GTP-binding domain H5404_08600 IPR009000 Translation protein, beta-barrel domain superfamily H5404_08600 IPR031157 Tr-type G domain, conserved site H5404_08600 IPR004161 Translation elongation factor EFTu-like, domain 2 H5404_08600 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_08600 IPR035647 EF-G domain III/V-like H5404_08600 IPR035651 BipA, domain V H5404_08600 IPR000640 Elongation factor EFG, domain V-like H5404_08600 IPR006298 GTP-binding protein TypA H5404_08615 IPR023679 Uncharacterised protein family UPF0761, bacterial H5404_08615 IPR017039 Virulence factor BrkB H5404_08620 IPR003732 D-aminoacyl-tRNA deacylase DTD H5404_08620 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily H5404_08625 IPR012660 Thioesterase, putative H5404_08625 IPR016181 Acyl-CoA N-acyltransferase H5404_08625 IPR000182 GNAT domain H5404_08625 IPR029069 HotDog domain superfamily H5404_08635 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising H5404_08635 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal H5404_08635 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal H5404_08635 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site H5404_08640 IPR000397 Heat shock protein Hsp33 H5404_08640 IPR016154 Heat shock protein Hsp33, C-terminal H5404_08640 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily H5404_08640 IPR016153 Heat shock protein Hsp33, N-terminal H5404_08645 IPR025708 Heat shock protein 15 H5404_08645 IPR002942 RNA-binding S4 domain H5404_08645 IPR036986 RNA-binding S4 domain superfamily H5404_08650 IPR036034 PDZ superfamily H5404_08650 IPR001639 Type II secretion system protein C H5404_08650 IPR024961 Type II secretion system protein C, N-terminal H5404_08655 IPR013356 Type II secretion system GspD H5404_08655 IPR004845 Type II secretion system GspD, conserved site H5404_08655 IPR001775 GspD/PilQ family H5404_08655 IPR004846 Type II/III secretion system H5404_08655 IPR005644 NolW-like H5404_08655 IPR038591 NolW-like superfamily H5404_08660 IPR001482 Type II/IV secretion system protein H5404_08660 IPR013369 Type II secretion system GspE H5404_08660 IPR037257 General secretory system II, protein E, N-terminal superfamily H5404_08660 IPR042181 Type II secretion system, protein E, N-terminal H5404_08660 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_08660 IPR003593 AAA+ ATPase domain H5404_08665 IPR018076 Type II secretion system F domain H5404_08665 IPR003004 GspF/PilC family H5404_08665 IPR011850 General secretion pathway protein F H5404_08665 IPR001992 Type II secretion system conserved site H5404_08665 IPR042094 Type II secretion system F domain superfamily H5404_08670 IPR010054 General secretion pathway protein G H5404_08670 IPR012902 Prokaryotic N-terminal methylation site H5404_08670 IPR013545 Type II secretion system protein G H5404_08670 IPR000983 Bacterial general secretion pathway protein G-type pilin H5404_08675 IPR012902 Prokaryotic N-terminal methylation site H5404_08675 IPR022346 General secretion pathway, GspH H5404_08675 IPR002416 Type II secretion system protein H H5404_08680 IPR012902 Prokaryotic N-terminal methylation site H5404_08680 IPR003413 Type II secretion system protein I domain H5404_08680 IPR010052 Type II secretion system protein I H5404_08685 IPR010055 Type II secretion system protein J H5404_08685 IPR012902 Prokaryotic N-terminal methylation site H5404_08690 IPR038072 GspK, central domain superfamily H5404_08690 IPR005628 General secretion pathway protein K H5404_08695 IPR007812 Type II secretion system protein L H5404_08695 IPR024230 GspL, cytoplasmic actin-ATPase-like domain H5404_08695 IPR025691 GspL periplasmic domain H5404_08700 IPR023229 Type II secretion system protein M, periplasmic domain superfamily H5404_08700 IPR007690 Type II secretion system, protein M H5404_08705 IPR022792 Type II secretion system, protein N H5404_08705 IPR000645 Type II secretion system protein N, conserved site H5404_08710 IPR020550 Inositol monophosphatase, conserved site H5404_08710 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ H5404_08710 IPR020583 Inositol monophosphatase, metal-binding site H5404_08710 IPR000760 Inositol monophosphatase-like H5404_08715 IPR000086 NUDIX hydrolase domain H5404_08715 IPR020084 NUDIX hydrolase, conserved site H5404_08715 IPR015797 NUDIX hydrolase-like domain superfamily H5404_08720 IPR034904 Fe-S cluster assembly domain superfamily H5404_08720 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal H5404_08720 IPR017726 Fe/S biogenesis protein NfuA H5404_08720 IPR000361 FeS cluster biogenesis H5404_08720 IPR035903 HesB-like domain superfamily H5404_08725 IPR029057 Phosphoribosyltransferase-like H5404_08725 IPR005222 Competence protein ComF H5404_08725 IPR000836 Phosphoribosyltransferase domain H5404_08730 IPR029058 Alpha/Beta hydrolase fold H5404_08730 IPR000073 Alpha/beta hydrolase fold-1 H5404_08730 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase H5404_08740 IPR032639 Tex protein, YqgF-like domain H5404_08740 IPR010994 RuvA domain 2-like H5404_08740 IPR006641 YqgF/RNase H-like domain H5404_08740 IPR037027 YqgF/RNase H-like domain superfamily H5404_08740 IPR018974 Tex-like protein, N-terminal H5404_08740 IPR023319 Tex-like protein, HTH domain superfamily H5404_08740 IPR023323 Tex-like domain superfamily H5404_08740 IPR003029 S1 domain H5404_08740 IPR022967 RNA-binding domain, S1 H5404_08740 IPR012337 Ribonuclease H-like superfamily H5404_08740 IPR012340 Nucleic acid-binding, OB-fold H5404_08740 IPR041692 HHH domain 9 H5404_08750 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily H5404_08750 IPR018151 Transcription elongation factor, GreA/GreB, conserved site H5404_08750 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal H5404_08750 IPR028624 Transcription elongation factor GreA/GreB H5404_08750 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal H5404_08750 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily H5404_08750 IPR006358 Transcription elongation factor GreB H5404_08750 IPR023459 Transcription elongation factor GreA/GreB family H5404_08760 IPR011006 CheY-like superfamily H5404_08760 IPR001867 OmpR/PhoB-type DNA-binding domain H5404_08760 IPR016032 Signal transduction response regulator, C-terminal effector H5404_08760 IPR001789 Signal transduction response regulator, receiver domain H5404_08760 IPR039420 Transcriptional regulatory protein WalR-like H5404_08760 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_08765 IPR004358 Signal transduction histidine kinase-related protein, C-terminal H5404_08765 IPR003594 Histidine kinase/HSP90-like ATPase H5404_08765 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_08765 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily H5404_08765 IPR003660 HAMP domain H5404_08765 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain H5404_08765 IPR005467 Histidine kinase domain H5404_08770 IPR006043 Xanthine/uracil/vitamin C permease H5404_08770 IPR006042 Xanthine/uracil permease H5404_08775 IPR001650 Helicase, C-terminal H5404_08775 IPR004609 ATP-dependent DNA helicase RecG H5404_08775 IPR033454 RecG, wedge domain H5404_08775 IPR012340 Nucleic acid-binding, OB-fold H5404_08775 IPR011545 DEAD/DEAH box helicase domain H5404_08775 IPR014001 Helicase superfamily 1/2, ATP-binding domain H5404_08775 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_08780 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal H5404_08780 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase H5404_08780 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal H5404_08780 IPR001537 tRNA/rRNA methyltransferase, SpoU type H5404_08780 IPR029028 Alpha/beta knot methyltransferases H5404_08785 IPR004811 RelA/SpoT family H5404_08785 IPR003607 HD/PDEase domain H5404_08785 IPR007685 RelA/SpoT H5404_08785 IPR002912 ACT domain H5404_08785 IPR033655 RelA, TGS domain H5404_08785 IPR012676 TGS-like H5404_08785 IPR012675 Beta-grasp domain superfamily H5404_08785 IPR004095 TGS H5404_08790 IPR003716 DNA-directed RNA polymerase, omega subunit H5404_08790 IPR006110 RNA polymerase, subunit omega/K/RPB6 H5404_08790 IPR012293 RNA polymerase subunit, RPB6/omega H5404_08790 IPR036161 RPB6/omega subunit-like superfamily H5404_08795 IPR020590 Guanylate kinase, conserved site H5404_08795 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_08795 IPR017665 Guanylate kinase H5404_08795 IPR008144 Guanylate kinase-like domain H5404_08795 IPR008145 Guanylate kinase/L-type calcium channel beta subunit H5404_08810 IPR003400 Biopolymer transport protein ExbD/TolR H5404_08815 IPR002898 MotA/TolQ/ExbB proton channel H5404_08830 IPR039426 Vitamin B12 transporter BtuB-like H5404_08830 IPR012910 TonB-dependent receptor, plug domain H5404_08830 IPR037066 TonB-dependent receptor, plug domain superfamily H5404_08830 IPR010101 TonB-dependent vitamin B12 transporter BtuB H5404_08830 IPR000531 TonB-dependent receptor-like, beta-barrel H5404_08830 IPR010916 TonB box, conserved site H5404_08830 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily H5404_08830 IPR010917 TonB-dependent receptor, conserved site H5404_08835 IPR035906 MetI-like superfamily H5404_08835 IPR000515 ABC transporter type 1, transmembrane domain MetI-like H5404_08840 IPR000515 ABC transporter type 1, transmembrane domain MetI-like H5404_08840 IPR035906 MetI-like superfamily H5404_08840 IPR025966 Oligopeptide transport permease C-like, N-terminal domain H5404_08845 IPR000914 Solute-binding protein family 5 domain H5404_08845 IPR039424 Solute-binding protein family 5 H5404_08845 IPR030678 Peptide/nickel binding protein, MppA-type H5404_08845 IPR023765 Solute-binding protein family 5, conserved site H5404_08850 IPR003439 ABC transporter-like H5404_08850 IPR017871 ABC transporter, conserved site H5404_08850 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal H5404_08850 IPR003593 AAA+ ATPase domain H5404_08850 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_08855 IPR017871 ABC transporter, conserved site H5404_08855 IPR003439 ABC transporter-like H5404_08855 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal H5404_08855 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_08855 IPR003593 AAA+ ATPase domain H5404_08865 IPR005229 Conserved hypothetical protein CHP00255 H5404_08865 IPR013527 YicC-like, N-terminal H5404_08865 IPR013551 Domain of unknown function DUF1732 H5404_08870 IPR001247 Exoribonuclease, phosphorolytic domain 1 H5404_08870 IPR015847 Exoribonuclease, phosphorolytic domain 2 H5404_08870 IPR018336 Ribonuclease PH, conserved site H5404_08870 IPR036345 Exoribonuclease, PH domain 2 superfamily H5404_08870 IPR027408 PNPase/RNase PH domain superfamily H5404_08870 IPR020568 Ribosomal protein S5 domain 2-type fold H5404_08870 IPR002381 Ribonuclease PH, bacterial-type H5404_08875 IPR004467 Orotate phosphoribosyl transferase domain H5404_08875 IPR023031 Orotate phosphoribosyltransferase H5404_08875 IPR000836 Phosphoribosyltransferase domain H5404_08875 IPR029057 Phosphoribosyltransferase-like H5404_08880 IPR004960 Bacterial lipid A biosynthesis acyltransferase H5404_08880 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase H5404_08885 IPR009057 Homeobox-like domain superfamily H5404_08885 IPR023769 Nucleoid occlusion factor SlmA H5404_08885 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily H5404_08885 IPR001647 DNA-binding HTH domain, TetR-type H5404_08890 IPR036551 Flavin prenyltransferase-like H5404_08890 IPR003382 Flavoprotein H5404_08890 IPR035929 CoaB-like superfamily H5404_08890 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC H5404_08890 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal H5404_08895 IPR004090 Chemotaxis methyl-accepting receptor H5404_08895 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain H5404_08895 IPR003660 HAMP domain H5404_08895 IPR033480 Single Cache domain 2 H5404_08900 IPR037518 MPN domain H5404_08900 IPR001405 Uncharacterised protein family UPF0758 H5404_08900 IPR010994 RuvA domain 2-like H5404_08900 IPR020891 Uncharacterised protein family UPF0758, conserved site H5404_08900 IPR025657 RadC-like JAB domain H5404_08905 IPR037147 Ribosomal protein L28/L24 superfamily H5404_08905 IPR001383 Ribosomal protein L28 H5404_08905 IPR026569 Ribosomal protein L28/L24 H5404_08905 IPR034704 L28p-like H5404_08910 IPR018264 Ribosomal protein L33, conserved site H5404_08910 IPR011332 Zinc-binding ribosomal protein H5404_08910 IPR001705 Ribosomal protein L33 H5404_08910 IPR038584 Ribosomal protein L33 superfamily H5404_08920 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding H5404_08920 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site H5404_08920 IPR020629 Formamidopyrimidine-DNA glycosylase H5404_08920 IPR010663 Zinc finger, FPG/IleRS-type H5404_08920 IPR000214 Zinc finger, DNA glycosylase/AP lyase-type H5404_08920 IPR010979 Ribosomal protein S13-like, H2TH H5404_08920 IPR035937 MutM-like, N-terminal H5404_08920 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain H5404_08925 IPR004821 Cytidyltransferase-like domain H5404_08925 IPR001980 Phosphopantetheine adenylyltransferase H5404_08925 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold H5404_08930 IPR006598 Glycosyl transferase CAP10 domain H5404_08935 IPR029044 Nucleotide-diphospho-sugar transferases H5404_08935 IPR001173 Glycosyltransferase 2-like H5404_08940 IPR001173 Glycosyltransferase 2-like H5404_08940 IPR029044 Nucleotide-diphospho-sugar transferases H5404_08945 IPR002201 Glycosyl transferase, family 9 H5404_08950 IPR036945 Diacylglycerol kinase (DAGK) superfamily H5404_08950 IPR000829 DAGK family H5404_08950 IPR033718 Diacylglycerol kinase, prokaryotic H5404_08955 IPR011009 Protein kinase-like domain superfamily H5404_08955 IPR022826 3-deoxy-D-manno-octulosonic acid kinase H5404_08955 IPR000719 Protein kinase domain H5404_08960 IPR036291 NAD(P)-binding domain superfamily H5404_08960 IPR016040 NAD(P)-binding domain H5404_08960 IPR005888 dTDP-glucose 4,6-dehydratase H5404_08965 IPR005835 Nucleotidyl transferase domain H5404_08965 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form H5404_08965 IPR029044 Nucleotide-diphospho-sugar transferases H5404_08970 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase H5404_08970 IPR015424 Pyridoxal phosphate-dependent transferase H5404_08970 IPR015421 Pyridoxal phosphate-dependent transferase, major domain H5404_08975 IPR001031 Thioesterase H5404_08975 IPR029058 Alpha/Beta hydrolase fold H5404_08975 IPR010071 Amino acid adenylation domain H5404_08975 IPR036736 ACP-like superfamily H5404_08975 IPR025110 AMP-binding enzyme, C-terminal domain H5404_08975 IPR020845 AMP-binding, conserved site H5404_08975 IPR000873 AMP-dependent synthetase/ligase H5404_08975 IPR042099 AMP-dependent synthetase-like superfamily H5404_08975 IPR001242 Condensation domain H5404_08975 IPR020806 Polyketide synthase, phosphopantetheine-binding domain H5404_08975 IPR006162 Phosphopantetheine attachment site H5404_08975 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily H5404_08975 IPR009081 Phosphopantetheine binding ACP domain H5404_08985 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III H5404_08985 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal H5404_08985 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 H5404_08985 IPR016039 Thiolase-like H5404_08995 IPR002347 Short-chain dehydrogenase/reductase SDR H5404_08995 IPR020904 Short-chain dehydrogenase/reductase, conserved site H5404_08995 IPR036291 NAD(P)-binding domain superfamily H5404_08995 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase H5404_09000 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain H5404_09000 IPR005793 Formyl transferase, C-terminal H5404_09000 IPR011034 Formyl transferase-like, C-terminal domain superfamily H5404_09000 IPR036477 Formyl transferase, N-terminal domain superfamily H5404_09000 IPR002376 Formyl transferase, N-terminal H5404_09000 IPR005794 Methionyl-tRNA formyltransferase H5404_09010 IPR029044 Nucleotide-diphospho-sugar transferases H5404_09010 IPR001173 Glycosyltransferase 2-like H5404_09025 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal H5404_09025 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily H5404_09025 IPR039901 3-deoxy-D-manno-octulosonic acid transferase H5404_09030 IPR002201 Glycosyl transferase, family 9 H5404_09030 IPR011910 ADP-heptose--LPS heptosyltransferase 2 H5404_09035 IPR011921 Lipid A biosynthesis myristoyltransferase H5404_09035 IPR004960 Bacterial lipid A biosynthesis acyltransferase H5404_09040 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase H5404_09040 IPR001509 NAD-dependent epimerase/dehydratase H5404_09040 IPR036291 NAD(P)-binding domain superfamily H5404_09045 IPR010344 Exopolysaccharide biosynthesis protein YbjH H5404_09080 IPR001296 Glycosyl transferase, family 1 H5404_09080 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain H5404_09105 IPR002656 Acyltransferase 3 H5404_09105 IPR036514 SGNH hydrolase superfamily H5404_09115 IPR003362 Bacterial sugar transferase H5404_09115 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase H5404_09120 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal H5404_09120 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type H5404_09120 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal H5404_09120 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation H5404_09120 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily H5404_09120 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily H5404_09120 IPR036291 NAD(P)-binding domain superfamily H5404_09120 IPR017476 UDP-glucose/GDP-mannose dehydrogenase H5404_09125 IPR001509 NAD-dependent epimerase/dehydratase H5404_09125 IPR036291 NAD(P)-binding domain superfamily H5404_09130 IPR029044 Nucleotide-diphospho-sugar transferases H5404_09130 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type H5404_09130 IPR005835 Nucleotidyl transferase domain H5404_09135 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like H5404_09135 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain H5404_09135 IPR022712 Beta-Casp domain H5404_09135 IPR001279 Metallo-beta-lactamase H5404_09140 IPR000652 Triosephosphate isomerase H5404_09140 IPR035990 Triosephosphate isomerase superfamily H5404_09140 IPR020861 Triosephosphate isomerase, active site H5404_09140 IPR013785 Aldolase-type TIM barrel H5404_09140 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic H5404_09160 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_09160 IPR036390 Winged helix DNA-binding domain superfamily H5404_09160 IPR018356 Transcription regulator, HTH DeoR-type, conserved site H5404_09160 IPR037171 NagB/RpiA transferase-like H5404_09160 IPR001034 DeoR-type HTH domain H5404_09160 IPR014036 DeoR C-terminal sensor domain H5404_09165 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase H5404_09170 IPR009252 Cell division protein ZapB H5404_09175 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria H5404_09175 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein H5404_09175 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily H5404_09175 IPR010203 Regulator of ribonuclease activity A H5404_09180 IPR000537 UbiA prenyltransferase family H5404_09180 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase H5404_09180 IPR026046 UbiA prenyltransferase domain containing protein 1 H5404_09185 IPR004491 Heat shock protein HslU H5404_09185 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_09185 IPR019489 Clp ATPase, C-terminal H5404_09185 IPR003959 ATPase, AAA-type, core H5404_09185 IPR003593 AAA+ ATPase domain H5404_09190 IPR001353 Proteasome, subunit alpha/beta H5404_09190 IPR023333 Proteasome B-type subunit H5404_09190 IPR029055 Nucleophile aminohydrolases, N-terminal H5404_09190 IPR022281 ATP-dependent protease, HslV subunit H5404_09200 IPR028082 Periplasmic binding protein-like I H5404_09200 IPR000843 LacI-type HTH domain H5404_09200 IPR010982 Lambda repressor-like, DNA-binding domain superfamily H5404_09205 IPR040498 PriA DNA helicase, Cys-rich region (CRR) domain H5404_09205 IPR041236 Primosomal protein N, C-terminal domain H5404_09205 IPR011545 DEAD/DEAH box helicase domain H5404_09205 IPR014001 Helicase superfamily 1/2, ATP-binding domain H5404_09205 IPR001650 Helicase, C-terminal H5404_09205 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_09205 IPR005259 Primosomal protein N' H5404_09205 IPR041222 Primosomal protein N', 3' DNA-binding domain H5404_09205 IPR042115 Primosomal protein N', 3' DNA-binding domain superfamily H5404_09210 IPR027491 Ribosomal protein L31 type A H5404_09210 IPR002150 Ribosomal protein L31 H5404_09210 IPR042105 Ribosomal protein L31 superfamily H5404_09210 IPR034704 L28p-like H5404_09215 IPR018268 Ribosomal protein S10, conserved site H5404_09215 IPR001848 Ribosomal protein S10 H5404_09215 IPR027486 Ribosomal protein S10 domain H5404_09215 IPR036838 Ribosomal protein S10 domain superfamily H5404_09220 IPR009000 Translation protein, beta-barrel domain superfamily H5404_09220 IPR000597 Ribosomal protein L3 H5404_09220 IPR019926 Ribosomal protein L3, conserved site H5404_09220 IPR019927 Ribosomal protein L3, bacterial/organelle-type H5404_09225 IPR013005 50S ribosomal protein uL4 H5404_09225 IPR023574 Ribosomal protein L4 domain superfamily H5404_09225 IPR002136 Ribosomal protein L4/L1e H5404_09230 IPR001014 Ribosomal protein L23/L25, conserved site H5404_09230 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily H5404_09230 IPR012678 Ribosomal protein L23/L15e core domain superfamily H5404_09230 IPR013025 Ribosomal protein L25/L23 H5404_09235 IPR002171 Ribosomal protein L2 H5404_09235 IPR005880 Ribosomal protein L2, bacterial/organellar-type H5404_09235 IPR022669 Ribosomal protein L2, C-terminal H5404_09235 IPR022671 Ribosomal protein L2, conserved site H5404_09235 IPR022666 Ribosomal Proteins L2, RNA binding domain H5404_09235 IPR012340 Nucleic acid-binding, OB-fold H5404_09235 IPR014726 Ribosomal protein L2, domain 3 H5404_09235 IPR008991 Translation protein SH3-like domain superfamily H5404_09235 IPR014722 Ribosomal protein L2, domain 2 H5404_09240 IPR023575 Ribosomal protein S19, superfamily H5404_09240 IPR002222 Ribosomal protein S19/S15 H5404_09240 IPR005732 Ribosomal protein S19, bacterial-type H5404_09240 IPR020934 Ribosomal protein S19 conserved site H5404_09245 IPR001063 Ribosomal protein L22/L17 H5404_09245 IPR018260 Ribosomal protein L22/L17, conserved site H5404_09245 IPR036394 Ribosomal protein L22/L17 superfamily H5404_09245 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type H5404_09250 IPR004087 K Homology domain H5404_09250 IPR036419 Ribosomal protein S3, C-terminal domain superfamily H5404_09250 IPR005704 Ribosomal protein S3, bacterial-type H5404_09250 IPR015946 K homology domain-like, alpha/beta H5404_09250 IPR004044 K Homology domain, type 2 H5404_09250 IPR018280 Ribosomal protein S3, conserved site H5404_09250 IPR009019 K homology domain superfamily, prokaryotic type H5404_09250 IPR001351 Ribosomal protein S3, C-terminal H5404_09255 IPR000114 Ribosomal protein L16 H5404_09255 IPR036920 Ribosomal protein L10e/L16 superfamily H5404_09255 IPR016180 Ribosomal protein L10e/L16 H5404_09255 IPR020798 Ribosomal protein L16, conserved site H5404_09260 IPR036049 Ribosomal protein L29/L35 superfamily H5404_09260 IPR018254 Ribosomal protein L29, conserved site H5404_09260 IPR001854 Ribosomal protein L29/L35 H5404_09265 IPR012340 Nucleic acid-binding, OB-fold H5404_09265 IPR019979 Ribosomal protein S17, conserved site H5404_09265 IPR000266 Ribosomal protein S17/S11 H5404_09265 IPR019984 30S ribosomal protein S17 H5404_09270 IPR000218 Ribosomal protein L14P H5404_09270 IPR036853 Ribosomal protein L14 superfamily H5404_09270 IPR005745 Ribosomal protein L14P, bacterial-type H5404_09270 IPR019972 Ribosomal protein L14P, conserved site H5404_09275 IPR005825 Ribosomal protein L24/L26, conserved site H5404_09275 IPR003256 Ribosomal protein L24 H5404_09275 IPR041988 Ribosomal Protein L26/L24, KOW domain H5404_09275 IPR014722 Ribosomal protein L2, domain 2 H5404_09275 IPR005824 KOW H5404_09275 IPR008991 Translation protein SH3-like domain superfamily H5404_09280 IPR020929 Ribosomal protein L5, conserved site H5404_09280 IPR031309 Ribosomal protein L5, C-terminal H5404_09280 IPR002132 Ribosomal protein L5 H5404_09280 IPR031310 Ribosomal protein L5, N-terminal H5404_09280 IPR022803 Ribosomal protein L5 domain superfamily H5404_09280 IPR020930 Ribosomal protein L5, bacterial-type H5404_09285 IPR001209 Ribosomal protein S14 H5404_09285 IPR023036 Ribosomal protein S14, bacterial/plastid H5404_09285 IPR018271 Ribosomal protein S14, conserved site H5404_09290 IPR035987 Ribosomal protein S8 superfamily H5404_09290 IPR000630 Ribosomal protein S8 H5404_09295 IPR000702 Ribosomal protein L6 H5404_09295 IPR002358 Ribosomal protein L6, conserved site H5404_09295 IPR019906 Ribosomal protein L6, bacterial-type H5404_09295 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily H5404_09295 IPR020040 Ribosomal protein L6, alpha-beta domain H5404_09300 IPR004389 Ribosomal protein L18, bacterial-type H5404_09300 IPR005484 Ribosomal protein L18 H5404_09305 IPR020568 Ribosomal protein S5 domain 2-type fold H5404_09305 IPR018192 Ribosomal protein S5, N-terminal, conserved site H5404_09305 IPR005712 Ribosomal protein S5, bacterial-type H5404_09305 IPR000851 Ribosomal protein S5 H5404_09305 IPR005324 Ribosomal protein S5, C-terminal H5404_09305 IPR013810 Ribosomal protein S5, N-terminal H5404_09305 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup H5404_09310 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily H5404_09310 IPR005996 Ribosomal protein L30, bacterial-type H5404_09310 IPR018038 Ribosomal protein L30, conserved site H5404_09310 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain H5404_09315 IPR001196 Ribosomal protein L15, conserved site H5404_09315 IPR005749 Ribosomal protein L15, bacterial-type H5404_09315 IPR030878 Ribosomal protein L15 H5404_09315 IPR021131 Ribosomal protein L18e/L15P H5404_09315 IPR036227 Ribosomal L18e/L15P superfamily H5404_09320 IPR030659 SecY conserved site H5404_09320 IPR002208 SecY/SEC61-alpha family H5404_09320 IPR023201 SecY domain superfamily H5404_09320 IPR026593 Protein translocase subunit SecY H5404_09325 IPR035977 Ribosomal protein L36 superfamily H5404_09325 IPR000473 Ribosomal protein L36 H5404_09330 IPR018269 Ribosomal protein S13, conserved site H5404_09330 IPR027437 30s ribosomal protein S13, C-terminal H5404_09330 IPR019980 Ribosomal protein S13, bacterial-type H5404_09330 IPR010979 Ribosomal protein S13-like, H2TH H5404_09330 IPR001892 Ribosomal protein S13 H5404_09335 IPR001971 Ribosomal protein S11 H5404_09335 IPR019981 Ribosomal protein S11, bacterial-type H5404_09335 IPR018102 Ribosomal S11, conserved site H5404_09335 IPR036967 Ribosomal protein S11 superfamily H5404_09340 IPR001912 Ribosomal protein S4/S9, N-terminal H5404_09340 IPR005709 Ribosomal protein S4, bacterial-type H5404_09340 IPR036986 RNA-binding S4 domain superfamily H5404_09340 IPR002942 RNA-binding S4 domain H5404_09340 IPR018079 Ribosomal protein S4, conserved site H5404_09340 IPR022801 Ribosomal protein S4/S9 H5404_09345 IPR011262 DNA-directed RNA polymerase, insert domain H5404_09345 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type H5404_09345 IPR036603 RNA polymerase, RBP11-like subunit H5404_09345 IPR011773 DNA-directed RNA polymerase, alpha subunit H5404_09345 IPR036643 DNA-directed RNA polymerase, insert domain superfamily H5404_09345 IPR011260 RNA polymerase, alpha subunit, C-terminal H5404_09350 IPR000456 Ribosomal protein L17 H5404_09350 IPR036373 Ribosomal protein L17 superfamily H5404_09360 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily H5404_09360 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal H5404_09360 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain H5404_09370 IPR000182 GNAT domain H5404_09370 IPR016181 Acyl-CoA N-acyltransferase H5404_09375 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain H5404_09375 IPR011545 DEAD/DEAH box helicase domain H5404_09375 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site H5404_09375 IPR001650 Helicase, C-terminal H5404_09375 IPR014014 RNA helicase, DEAD-box type, Q motif H5404_09375 IPR014001 Helicase superfamily 1/2, ATP-binding domain H5404_09375 IPR028619 ATP-dependent RNA helicase DbpA H5404_09375 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_09375 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily H5404_09385 IPR029052 Metallo-dependent phosphatase-like H5404_09385 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase H5404_09385 IPR041827 CpdB, N-terminal metallophosphatase domain H5404_09385 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type H5404_09385 IPR006179 5'-Nucleotidase/apyrase H5404_09385 IPR006146 5'-Nucleotidase, conserved site H5404_09385 IPR036907 5'-Nucleotidase, C-terminal domain superfamily H5404_09385 IPR008334 5'-Nucleotidase, C-terminal H5404_09390 IPR006367 Sirohaem synthase, N-terminal H5404_09390 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site H5404_09390 IPR036291 NAD(P)-binding domain superfamily H5404_09390 IPR006366 Uroporphyrin-III C-methyltransferase H5404_09390 IPR000878 Tetrapyrrole methylase H5404_09390 IPR019478 Sirohaem synthase, dimerisation domain H5404_09390 IPR028281 Siroheme synthase, central domain H5404_09390 IPR012409 Sirohaem synthase H5404_09390 IPR037115 Sirohaem synthase, dimerisation domain superfamily H5404_09390 IPR035996 Tetrapyrrole methylase superfamily H5404_09390 IPR014777 Tetrapyrrole methylase, subdomain 1 H5404_09390 IPR014776 Tetrapyrrole methylase, subdomain 2 H5404_09395 IPR011784 Sulphate adenylyltransferase, small subunit H5404_09395 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold H5404_09395 IPR002500 Phosphoadenosine phosphosulphate reductase H5404_09400 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal H5404_09400 IPR009000 Translation protein, beta-barrel domain superfamily H5404_09400 IPR031157 Tr-type G domain, conserved site H5404_09400 IPR011779 Sulphate adenylyltransferase, large subunit H5404_09400 IPR000795 Transcription factor, GTP-binding domain H5404_09400 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_09400 IPR041757 Sulfate adenylyltransferase subunit CysN, GTP-binding domain H5404_09400 IPR005225 Small GTP-binding protein domain H5404_09405 IPR031312 Sodium/sulphate symporter, conserved site H5404_09405 IPR006037 Regulator of K+ conductance, C-terminal H5404_09405 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily H5404_09405 IPR004680 Citrate transporter-like domain H5404_09410 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_09410 IPR002891 Adenylyl-sulfate kinase H5404_09430 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_09430 IPR017871 ABC transporter, conserved site H5404_09430 IPR003593 AAA+ ATPase domain H5404_09430 IPR003439 ABC transporter-like H5404_09440 IPR019731 Protein of unknown function DUF2607 H5404_09445 IPR006513 Conserved hypothetical protein CHP01626, YtfJ H5404_09450 IPR009491 Protein of unknown function DUF1107 H5404_09455 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily H5404_09455 IPR002569 Peptide methionine sulphoxide reductase MsrA H5404_09460 IPR000184 Bacterial surface antigen (D15) H5404_09460 IPR039910 Surface antigen D15-like H5404_09460 IPR035243 TamA, POTRA domain 1 H5404_09465 IPR007452 Translocation and assembly module TamB H5404_09470 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily H5404_09470 IPR013024 Gamma-glutamyl cyclotransferase-like H5404_09470 IPR039126 Gamma-glutamylaminecyclotransferase H5404_09470 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like H5404_09480 IPR036649 Inorganic pyrophosphatase superfamily H5404_09480 IPR008162 Inorganic pyrophosphatase H5404_09485 IPR000146 Fructose-1,6-bisphosphatase class 1 H5404_09485 IPR020548 Fructose-1,6-bisphosphatase, active site H5404_09485 IPR028343 Fructose-1,6-bisphosphatase H5404_09485 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal H5404_09490 IPR036565 Mur-like, catalytic domain superfamily H5404_09490 IPR005757 Murein peptide ligase H5404_09490 IPR004101 Mur ligase, C-terminal H5404_09490 IPR013221 Mur ligase, central H5404_09490 IPR036615 Mur ligase, C-terminal domain superfamily H5404_09490 IPR000713 Mur ligase, N-terminal catalytic domain H5404_09495 IPR036551 Flavin prenyltransferase-like H5404_09495 IPR003382 Flavoprotein H5404_09495 IPR004507 Flavin prenyltransferase UbiX-like H5404_09500 IPR006061 Solute-binding family 1, conserved site H5404_09500 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria H5404_09500 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter H5404_09505 IPR000515 ABC transporter type 1, transmembrane domain MetI-like H5404_09505 IPR005947 Thiamine ABC transporter, permease protein H5404_09505 IPR035906 MetI-like superfamily H5404_09510 IPR003439 ABC transporter-like H5404_09510 IPR017871 ABC transporter, conserved site H5404_09510 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ H5404_09510 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_09510 IPR003593 AAA+ ATPase domain H5404_09525 IPR011852 TRAP transporter solute receptor, TAXI family H5404_09530 IPR036390 Winged helix DNA-binding domain superfamily H5404_09530 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_09530 IPR020900 Arginine repressor, DNA-binding domain H5404_09530 IPR036251 Arginine repressor, C-terminal domain superfamily H5404_09530 IPR020899 Arginine repressor, C-terminal H5404_09530 IPR001669 Arginine repressor H5404_09535 IPR001252 Malate dehydrogenase, active site H5404_09535 IPR001236 Lactate/malate dehydrogenase, N-terminal H5404_09535 IPR022383 Lactate/malate dehydrogenase, C-terminal H5404_09535 IPR010097 Malate dehydrogenase, type 1 H5404_09535 IPR023958 Malate dehydrogenase, type 1, bacterial H5404_09535 IPR036291 NAD(P)-binding domain superfamily H5404_09535 IPR001557 L-lactate/malate dehydrogenase H5404_09535 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal H5404_09545 IPR033749 Polyprenyl synthetase, conserved site H5404_09545 IPR000092 Polyprenyl synthetase H5404_09545 IPR008949 Isoprenoid synthase domain superfamily H5404_09550 IPR036164 L21-like superfamily H5404_09550 IPR028909 Ribosomal protein L21-like H5404_09550 IPR001787 Ribosomal protein L21 H5404_09550 IPR018258 Ribosomal protein L21, conserved site H5404_09555 IPR018261 Ribosomal protein L27, conserved site H5404_09555 IPR001684 Ribosomal protein L27 H5404_09560 IPR006073 GTP binding domain H5404_09560 IPR036726 GTP1/OBG domain superfamily H5404_09560 IPR006169 GTP1/OBG domain H5404_09560 IPR006074 GTP1/OBG, conserved site H5404_09560 IPR014100 GTP-binding protein Obg/CgtA H5404_09560 IPR035101 GTP-binding protein, Obg-type H5404_09560 IPR031167 OBG-type guanine nucleotide-binding (G) domain H5404_09560 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_09565 IPR010619 Putative threonine/serine exporter H5404_09570 IPR024528 Threonine/Serine exporter, ThrE H5404_09570 IPR020914 Uncharacterised protein family UPF0442 H5404_09575 IPR001796 Dihydrofolate reductase domain H5404_09575 IPR024072 Dihydrofolate reductase-like domain superfamily H5404_09575 IPR012259 Dihydrofolate reductase H5404_09575 IPR017925 Dihydrofolate reductase conserved site H5404_09580 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type H5404_09580 IPR029052 Metallo-dependent phosphatase-like H5404_09580 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) H5404_09585 IPR036767 ApaG domain superfamily H5404_09585 IPR023065 Uncharacterised protein family ApaG H5404_09585 IPR007474 ApaG domain H5404_09590 IPR011530 Ribosomal RNA adenine dimethylase H5404_09590 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal H5404_09590 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_09590 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site H5404_09590 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm H5404_09590 IPR023165 rRNA adenine dimethylase-like H5404_09595 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase H5404_09595 IPR005255 PdxA family H5404_09600 IPR023034 Peptidyl-prolyl isomerase SurA H5404_09600 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type H5404_09600 IPR027304 Trigger factor/SurA domain superfamily H5404_09600 IPR015391 SurA N-terminal H5404_09605 IPR005653 Organic solvent tolerance-like, N-terminal H5404_09605 IPR007543 LptD, C-terminal H5404_09605 IPR020889 LPS-assembly protein LptD H5404_09610 IPR036869 Chaperone J-domain superfamily H5404_09610 IPR023749 Co-chaperone DjlA H5404_09610 IPR007791 Co-chaperone DjlA, N-terminal H5404_09610 IPR029024 TerB-like H5404_09610 IPR001623 DnaJ domain H5404_09620 IPR033940 3-isopropylmalate dehydratase, swivel domain H5404_09620 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain H5404_09620 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel H5404_09620 IPR004431 3-isopropylmalate dehydratase, small subunit H5404_09625 IPR036008 Aconitase, iron-sulfur domain H5404_09625 IPR004430 3-isopropylmalate dehydratase, large subunit H5404_09625 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain H5404_09625 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 H5404_09625 IPR033941 3-Isopropylmalate dehydratase, catalytic domain H5404_09625 IPR018136 Aconitase family, 4Fe-4S cluster binding site H5404_09630 IPR004429 Isopropylmalate dehydrogenase H5404_09630 IPR024084 Isopropylmalate dehydrogenase-like domain H5404_09630 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site H5404_09635 IPR005671 2-isopropylmalate synthase, bacterial-type H5404_09635 IPR000891 Pyruvate carboxyltransferase H5404_09635 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain H5404_09635 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site H5404_09635 IPR013785 Aldolase-type TIM barrel H5404_09635 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily H5404_09645 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily H5404_09645 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase H5404_09655 IPR000847 Transcription regulator HTH, LysR H5404_09655 IPR036390 Winged helix DNA-binding domain superfamily H5404_09655 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_09655 IPR005119 LysR, substrate-binding H5404_09660 IPR020845 AMP-binding, conserved site H5404_09660 IPR000873 AMP-dependent synthetase/ligase H5404_09660 IPR042099 AMP-dependent synthetase-like superfamily H5404_09665 IPR029061 Thiamin diphosphate-binding fold H5404_09665 IPR012846 Acetolactate synthase, large subunit, biosynthetic H5404_09665 IPR029035 DHS-like NAD/FAD-binding domain superfamily H5404_09665 IPR039368 Acetolactate synthase large subunit, TPP binding domain H5404_09665 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding H5404_09665 IPR012000 Thiamine pyrophosphate enzyme, central domain H5404_09665 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain H5404_09665 IPR000399 TPP-binding enzyme, conserved site H5404_09670 IPR004789 Acetolactate synthase, small subunit H5404_09670 IPR002912 ACT domain H5404_09670 IPR039557 AHAS, ACT domain H5404_09670 IPR019455 Acetolactate synthase, small subunit, C-terminal H5404_09670 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal H5404_09675 IPR000160 GGDEF domain H5404_09675 IPR029787 Nucleotide cyclase H5404_09685 IPR015795 Pyruvate kinase, C-terminal H5404_09685 IPR015806 Pyruvate kinase, insert domain superfamily H5404_09685 IPR015793 Pyruvate kinase, barrel H5404_09685 IPR018209 Pyruvate kinase, active site H5404_09685 IPR011037 Pyruvate kinase-like, insert domain superfamily H5404_09685 IPR040442 Pyruvate kinase-like domain superfamily H5404_09685 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily H5404_09685 IPR001697 Pyruvate kinase H5404_09685 IPR036918 Pyruvate kinase, C-terminal domain superfamily H5404_09690 IPR001034 DeoR-type HTH domain H5404_09690 IPR014036 DeoR C-terminal sensor domain H5404_09690 IPR037171 NagB/RpiA transferase-like H5404_09690 IPR036390 Winged helix DNA-binding domain superfamily H5404_09690 IPR018356 Transcription regulator, HTH DeoR-type, conserved site H5404_09690 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_09695 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising H5404_09695 IPR001347 Sugar isomerase (SIS) H5404_09695 IPR035490 GlmS/FrlB, SIS domain 2 H5404_09695 IPR017932 Glutamine amidotransferase type 2 domain H5404_09695 IPR035466 GlmS/AgaS, SIS domain 1 H5404_09695 IPR029055 Nucleophile aminohydrolases, N-terminal H5404_09705 IPR001867 OmpR/PhoB-type DNA-binding domain H5404_09705 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response H5404_09705 IPR001789 Signal transduction response regulator, receiver domain H5404_09705 IPR039420 Transcriptional regulatory protein WalR-like H5404_09705 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_09705 IPR011006 CheY-like superfamily H5404_09710 IPR003594 Histidine kinase/HSP90-like ATPase H5404_09710 IPR006290 Heavy metal sensor kinase H5404_09710 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_09710 IPR003660 HAMP domain H5404_09710 IPR005467 Histidine kinase domain H5404_09710 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily H5404_09710 IPR004358 Signal transduction histidine kinase-related protein, C-terminal H5404_09710 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain H5404_09715 IPR016205 Glycerol dehydrogenase H5404_09715 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA H5404_09715 IPR018211 Alcohol dehydrogenase, iron-type, conserved site H5404_09720 IPR004006 DhaK domain H5404_09720 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 H5404_09725 IPR012737 Dihydroxyacetone kinase, subunit L H5404_09725 IPR036117 DhaL domain superfamily H5404_09725 IPR004007 DhaL domain H5404_09730 IPR023151 PEP-utilising enzyme, conserved site H5404_09730 IPR000121 PEP-utilising enzyme, C-terminal H5404_09730 IPR018274 PEP-utilising enzyme, active site H5404_09730 IPR008279 PEP-utilising enzyme, mobile domain H5404_09730 IPR036637 Phosphohistidine domain superfamily H5404_09730 IPR024692 Phosphotransferase system, enzyme I H5404_09730 IPR006318 Phosphotransferase system, enzyme I-like H5404_09730 IPR008731 Phosphotransferase system, enzyme I N-terminal H5404_09730 IPR036618 PtsI, HPr-binding domain superfamily H5404_09730 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily H5404_09730 IPR040442 Pyruvate kinase-like domain superfamily H5404_09735 IPR013767 PAS fold H5404_09735 IPR035965 PAS domain superfamily H5404_09735 IPR000014 PAS domain H5404_09735 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_09735 IPR002197 DNA binding HTH domain, Fis-type H5404_09735 IPR009057 Homeobox-like domain superfamily H5404_09735 IPR002078 RNA polymerase sigma factor 54 interaction domain H5404_09735 IPR003593 AAA+ ATPase domain H5404_09735 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 H5404_09735 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 H5404_09735 IPR029016 GAF-like domain superfamily H5404_09740 IPR038026 MtlR-like superfamily H5404_09740 IPR007761 Mannitol repressor MtlR-like H5404_09745 IPR036291 NAD(P)-binding domain superfamily H5404_09745 IPR023028 Mannitol-1-phosphate 5-dehydrogenase H5404_09745 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily H5404_09745 IPR000669 Mannitol dehydrogenase H5404_09745 IPR013328 6-phosphogluconate dehydrogenase, domain 2 H5404_09745 IPR013118 Mannitol dehydrogenase, C-terminal H5404_09745 IPR023027 Mannitol dehydrogenase, conserved site H5404_09745 IPR013131 Mannitol dehydrogenase, N-terminal H5404_09750 IPR002178 PTS EIIA type-2 domain H5404_09750 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC H5404_09750 IPR013014 Phosphotransferase system, EIIC component, type 2 H5404_09750 IPR003352 Phosphotransferase system, EIIC H5404_09750 IPR029503 Phosphotransferase system EIIB component, mannitol-specific H5404_09750 IPR003501 Phosphotransferase system, EIIB component, type 2/3 H5404_09750 IPR013011 Phosphotransferase system, EIIB component, type 2 H5404_09750 IPR036095 PTS system IIB component-like superfamily H5404_09750 IPR016152 Phosphotransferase/anion transporter H5404_09780 IPR004872 Lipoprotein NlpA family H5404_09815 IPR000551 MerR-type HTH domain H5404_09815 IPR011789 Cu(I)-responsive transcriptional regulator H5404_09815 IPR009061 Putative DNA-binding domain superfamily H5404_09835 IPR000055 Restriction endonuclease, type I, HsdS H5404_09840 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain H5404_09840 IPR002052 DNA methylase, N-6 adenine-specific, conserved site H5404_09840 IPR003356 DNA methylase, adenine-specific H5404_09840 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily H5404_09840 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_09860 IPR001091 Restriction/modification DNA-methylase H5404_09860 IPR002941 DNA methylase N-4/N-6 H5404_09860 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_09860 IPR002052 DNA methylase, N-6 adenine-specific, conserved site H5404_09865 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_09865 IPR001650 Helicase, C-terminal H5404_09865 IPR014001 Helicase superfamily 1/2, ATP-binding domain H5404_09865 IPR006935 Helicase/UvrB, N-terminal H5404_09865 IPR013670 EcoEI R protein C-terminal domain H5404_09865 IPR029464 Type I restriction enzyme R protein, N-terminal domain H5404_09880 IPR001207 Transposase, mutator type H5404_09890 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain H5404_09920 IPR007631 RNA polymerase sigma factor 70, non-essential domain H5404_09920 IPR009042 RNA polymerase sigma-70 region 1.2 H5404_09920 IPR007127 RNA polymerase sigma factor 70, region 1.1 H5404_09920 IPR012760 RNA polymerase sigma factor RpoD, C-terminal H5404_09920 IPR013325 RNA polymerase sigma factor, region 2 H5404_09920 IPR000943 RNA polymerase sigma-70 H5404_09920 IPR007627 RNA polymerase sigma-70 region 2 H5404_09920 IPR042189 Sigma-70 factor, region 1.1 superfamily H5404_09920 IPR007630 RNA polymerase sigma-70 region 4 H5404_09920 IPR014284 RNA polymerase sigma-70 like domain H5404_09920 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_09920 IPR028630 RNA polymerase sigma factor RpoD H5404_09920 IPR007624 RNA polymerase sigma-70 region 3 H5404_09920 IPR013324 RNA polymerase sigma factor, region 3/4-like H5404_09925 IPR034151 Bacterial DnaG primase, TOPRIM domain H5404_09925 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily H5404_09925 IPR013264 DNA primase, catalytic core, N-terminal H5404_09925 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal H5404_09925 IPR019475 DNA primase, DnaB-helicase binding domain H5404_09925 IPR030846 DNA primase DnaG, bacteria H5404_09925 IPR013173 DNA primase DnaG, DnaB-binding domain H5404_09925 IPR002694 Zinc finger, CHC2-type H5404_09925 IPR006171 TOPRIM domain H5404_09925 IPR036977 DNA Primase, CHC2-type zinc finger H5404_09925 IPR006295 DNA primase, DnaG H5404_09930 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like H5404_09930 IPR019004 Uncharacterised protein YqeY/Aim41 H5404_09930 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C-terminal, domain 2 H5404_09930 IPR042184 YqeY/Aim41, N-terminal domain H5404_09935 IPR038380 Ribosomal protein S21 superfamily H5404_09935 IPR018278 Ribosomal protein S21, conserved site H5404_09935 IPR001911 Ribosomal protein S21 H5404_09940 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD H5404_09940 IPR017861 Kae1/TsaD family H5404_09940 IPR000905 Gcp-like domain H5404_09940 IPR017860 Peptidase M22, conserved site H5404_09945 IPR000073 Alpha/beta hydrolase fold-1 H5404_09945 IPR029058 Alpha/Beta hydrolase fold H5404_09950 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY H5404_09955 IPR006157 Dihydroneopterin aldolase/epimerase domain H5404_09955 IPR006156 Dihydroneopterin aldolase H5404_09960 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK H5404_09960 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily H5404_09965 IPR003824 Undecaprenyl-diphosphatase UppP H5404_09970 IPR012006 tRNA nucleotidyltransferase, proteobacteria H5404_09970 IPR003607 HD/PDEase domain H5404_09970 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain H5404_09970 IPR006674 HD domain H5404_09970 IPR002646 Poly A polymerase, head domain H5404_09975 IPR036366 PGBD superfamily H5404_09975 IPR002477 Peptidoglycan binding-like H5404_09975 IPR036365 PGBD-like superfamily H5404_09975 IPR003593 AAA+ ATPase domain H5404_09975 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_09985 IPR016476 SH3 domain protein H5404_09985 IPR003646 SH3-like domain, bacterial-type H5404_09990 IPR001204 Phosphate transporter H5404_09995 IPR018445 Putative phosphate transport regulator H5404_09995 IPR038078 PhoU-like domain superfamily H5404_09995 IPR002727 Protein of unknown function DUF47 H5404_10000 IPR033469 CYTH-like domain superfamily H5404_10000 IPR007899 CHAD domain H5404_10000 IPR023577 CYTH domain H5404_10000 IPR039013 Inorganic triphosphatase YgiF H5404_10010 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain H5404_10010 IPR003660 HAMP domain H5404_10010 IPR004090 Chemotaxis methyl-accepting receptor H5404_10015 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase H5404_10015 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain H5404_10015 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme H5404_10020 IPR011611 Carbohydrate kinase PfkB H5404_10020 IPR004821 Cytidyltransferase-like domain H5404_10020 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site H5404_10020 IPR011914 RfaE bifunctional protein, domain II H5404_10020 IPR029056 Ribokinase-like H5404_10020 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold H5404_10020 IPR011913 RfaE bifunctional protein, domain I H5404_10020 IPR023030 Bifunctional protein HldE H5404_10025 IPR010130 Type I secretion outer membrane protein, TolC H5404_10025 IPR003423 Outer membrane efflux protein H5404_10030 IPR000086 NUDIX hydrolase domain H5404_10030 IPR020084 NUDIX hydrolase, conserved site H5404_10030 IPR015797 NUDIX hydrolase-like domain superfamily H5404_10030 IPR004385 Nucleoside diphosphate pyrophosphatase H5404_10035 IPR009659 Protein of unknown function DUF1249 H5404_10040 IPR029052 Metallo-dependent phosphatase-like H5404_10040 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA H5404_10040 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type H5404_10045 IPR029058 Alpha/Beta hydrolase fold H5404_10045 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA H5404_10050 IPR006171 TOPRIM domain H5404_10050 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_10050 IPR018522 DNA topoisomerase, type IIA, conserved site H5404_10050 IPR001241 DNA topoisomerase, type IIA H5404_10050 IPR013760 DNA topoisomerase, type IIA-like domain superfamily H5404_10050 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal H5404_10050 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 H5404_10050 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative H5404_10050 IPR020568 Ribosomal protein S5 domain 2-type fold H5404_10050 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup H5404_10050 IPR003594 Histidine kinase/HSP90-like ATPase H5404_10050 IPR002288 DNA gyrase B subunit, C-terminal H5404_10055 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal H5404_10055 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal H5404_10055 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative H5404_10055 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily H5404_10055 IPR013760 DNA topoisomerase, type IIA-like domain superfamily H5404_10055 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta H5404_10055 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat H5404_10060 IPR001940 Peptidase S1C H5404_10060 IPR036034 PDZ superfamily H5404_10060 IPR011783 Peptidase S1C, DegS H5404_10060 IPR001478 PDZ domain H5404_10060 IPR009003 Peptidase S1, PA clan H5404_10065 IPR011782 Peptidase S1C, Do H5404_10065 IPR001478 PDZ domain H5404_10065 IPR001940 Peptidase S1C H5404_10065 IPR009003 Peptidase S1, PA clan H5404_10065 IPR036034 PDZ superfamily H5404_10070 IPR009386 Protein of unknown function DUF1043 H5404_10075 IPR030870 Cell division protein ZapE H5404_10075 IPR005654 ATPase, AFG1-like H5404_10075 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_10080 IPR036899 Ribosomal protein L13 superfamily H5404_10080 IPR005823 Ribosomal protein L13, bacterial-type H5404_10080 IPR005822 Ribosomal protein L13 H5404_10080 IPR023563 Ribosomal protein L13, conserved site H5404_10085 IPR020574 Ribosomal protein S9, conserved site H5404_10085 IPR000754 Ribosomal protein S9 H5404_10085 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup H5404_10085 IPR020568 Ribosomal protein S5 domain 2-type fold H5404_10085 IPR023035 Ribosomal protein S9, bacterial/plastid H5404_10090 IPR005805 Rieske iron-sulphur protein, C-terminal H5404_10090 IPR017941 Rieske [2Fe-2S] iron-sulphur domain H5404_10090 IPR014349 Rieske iron-sulphur protein H5404_10090 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily H5404_10090 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit H5404_10090 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal H5404_10095 IPR036150 Cytochrome b/b6, C-terminal domain superfamily H5404_10095 IPR030689 Cytochrome b H5404_10095 IPR016174 Di-haem cytochrome, transmembrane H5404_10095 IPR027387 Cytochrome b/b6-like domain superfamily H5404_10095 IPR005798 Cytochrome b/b6, C-terminal H5404_10095 IPR005797 Cytochrome b/b6, N-terminal H5404_10100 IPR002326 Cytochrome c1 H5404_10100 IPR036909 Cytochrome c-like domain superfamily H5404_10100 IPR009056 Cytochrome c-like domain H5404_10105 IPR036249 Thioredoxin-like superfamily H5404_10105 IPR004045 Glutathione S-transferase, N-terminal H5404_10105 IPR034341 Stringent starvation protein A, N-terminal H5404_10105 IPR036282 Glutathione S-transferase, C-terminal domain superfamily H5404_10105 IPR004046 Glutathione S-transferase, C-terminal H5404_10105 IPR040079 Glutathione Transferase family H5404_10105 IPR010987 Glutathione S-transferase, C-terminal-like H5404_10110 IPR036760 SspB-like superfamily H5404_10110 IPR007481 Stringent starvation protein B H5404_10115 IPR007055 BON domain H5404_10115 IPR014004 Transport-associated and nodulation domain, bacteria H5404_10120 IPR001347 Sugar isomerase (SIS) H5404_10120 IPR035461 GmhA/DiaA H5404_10120 IPR023070 DnaA initiator-associating protein H5404_10125 IPR011856 tRNA endonuclease-like domain superfamily H5404_10125 IPR003509 Uncharacterised protein family UPF0102 H5404_10125 IPR011335 Restriction endonuclease type II-like H5404_10130 IPR007443 Penicillin-binding protein activator LpoA H5404_10130 IPR028082 Periplasmic binding protein-like I H5404_10130 IPR011990 Tetratricopeptide-like helical domain superfamily H5404_10135 IPR018063 SAM-dependent methyltransferase RsmI, conserved site H5404_10135 IPR008189 rRNA small subunit methyltransferase I H5404_10135 IPR014777 Tetrapyrrole methylase, subdomain 1 H5404_10135 IPR035996 Tetrapyrrole methylase superfamily H5404_10135 IPR000878 Tetrapyrrole methylase H5404_10135 IPR014776 Tetrapyrrole methylase, subdomain 2 H5404_10145 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_10145 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily H5404_10145 IPR002903 Ribosomal RNA small subunit methyltransferase H H5404_10150 IPR011922 Cell division protein FtsL H5404_10155 IPR005311 Penicillin-binding protein, dimerisation domain H5404_10155 IPR001460 Penicillin-binding protein, transpeptidase H5404_10155 IPR012338 Beta-lactamase/transpeptidase-like H5404_10155 IPR037532 Peptidoglycan D,D-transpeptidase FtsI H5404_10155 IPR036138 Penicillin-binding protein, dimerisation domain superfamily H5404_10160 IPR004101 Mur ligase, C-terminal H5404_10160 IPR036615 Mur ligase, C-terminal domain superfamily H5404_10160 IPR013221 Mur ligase, central H5404_10160 IPR000713 Mur ligase, N-terminal catalytic domain H5404_10160 IPR035911 MurE/MurF, N-terminal H5404_10160 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase H5404_10160 IPR036565 Mur-like, catalytic domain superfamily H5404_10165 IPR036615 Mur ligase, C-terminal domain superfamily H5404_10165 IPR013221 Mur ligase, central H5404_10165 IPR036565 Mur-like, catalytic domain superfamily H5404_10165 IPR000713 Mur ligase, N-terminal catalytic domain H5404_10165 IPR035911 MurE/MurF, N-terminal H5404_10165 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase H5404_10165 IPR004101 Mur ligase, C-terminal H5404_10170 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase H5404_10170 IPR000715 Glycosyl transferase, family 4 H5404_10170 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site H5404_10175 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase H5404_10175 IPR036615 Mur ligase, C-terminal domain superfamily H5404_10175 IPR004101 Mur ligase, C-terminal H5404_10175 IPR013221 Mur ligase, central H5404_10175 IPR036565 Mur-like, catalytic domain superfamily H5404_10180 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site H5404_10180 IPR013437 Probable peptidoglycan glycosyltransferase FtsW H5404_10180 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA H5404_10185 IPR007235 Glycosyl transferase, family 28, C-terminal H5404_10185 IPR004276 Glycosyltransferase family 28, N-terminal domain H5404_10185 IPR006009 N-acetylglucosaminyltransferase, MurG H5404_10190 IPR005758 UDP-N-acetylmuramate--L-alanine ligase H5404_10190 IPR000713 Mur ligase, N-terminal catalytic domain H5404_10190 IPR013221 Mur ligase, central H5404_10190 IPR004101 Mur ligase, C-terminal H5404_10190 IPR036565 Mur-like, catalytic domain superfamily H5404_10190 IPR036615 Mur ligase, C-terminal domain superfamily H5404_10195 IPR013685 POTRA domain, FtsQ-type H5404_10195 IPR034746 POTRA domain H5404_10195 IPR026579 Cell division protein FtsQ H5404_10195 IPR005548 Cell division protein FtsQ/DivIB H5404_10200 IPR020823 Cell division protein FtsA H5404_10200 IPR003494 SHS2 domain inserted in FtsA H5404_10205 IPR003008 Tubulin/FtsZ, GTPase domain H5404_10205 IPR036525 Tubulin/FtsZ, GTPase domain superfamily H5404_10205 IPR000158 Cell division protein FtsZ H5404_10205 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain H5404_10205 IPR008280 Tubulin/FtsZ, C-terminal H5404_10205 IPR024757 Cell division protein FtsZ, C-terminal H5404_10205 IPR020805 Cell division protein FtsZ, conserved site H5404_10210 IPR020568 Ribosomal protein S5 domain 2-type fold H5404_10210 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase H5404_10210 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal H5404_10210 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal H5404_10220 IPR020937 SecA conserved site H5404_10220 IPR004027 SEC-C motif H5404_10220 IPR036670 SecA, preprotein cross-linking domain superfamily H5404_10220 IPR036266 SecA, Wing/Scaffold superfamily H5404_10220 IPR011116 SecA Wing/Scaffold H5404_10220 IPR011130 SecA, preprotein cross-linking domain H5404_10220 IPR014018 SecA motor DEAD H5404_10220 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_10220 IPR000185 Protein translocase subunit SecA H5404_10220 IPR011115 SecA DEAD-like, N-terminal H5404_10225 IPR003561 Mutator MutT H5404_10225 IPR020476 NUDIX hydrolase H5404_10225 IPR015797 NUDIX hydrolase-like domain superfamily H5404_10225 IPR020084 NUDIX hydrolase, conserved site H5404_10225 IPR000086 NUDIX hydrolase domain H5404_10230 IPR036291 NAD(P)-binding domain superfamily H5404_10230 IPR023940 Dihydrodipicolinate reductase H5404_10230 IPR022664 Dihydrodipicolinate reductase, conserved site H5404_10230 IPR000846 Dihydrodipicolinate reductase, N-terminal H5404_10230 IPR022663 Dihydrodipicolinate reductase, C-terminal H5404_10235 IPR035686 Carbamoyl-phosphate synthase small subunit, GATase1 domain H5404_10235 IPR006274 Carbamoyl-phosphate synthase, small subunit H5404_10235 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain H5404_10235 IPR017926 Glutamine amidotransferase H5404_10235 IPR029062 Class I glutamine amidotransferase-like H5404_10235 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily H5404_10240 IPR006275 Carbamoyl-phosphate synthase, large subunit H5404_10240 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily H5404_10240 IPR016185 Pre-ATP-grasp domain superfamily H5404_10240 IPR036914 Methylglyoxal synthase-like domain superfamily H5404_10240 IPR033937 Carbamoyl-phosphate synthase large chain, methylglyoxal synthase-like domain H5404_10240 IPR011607 Methylglyoxal synthase-like domain H5404_10240 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain H5404_10240 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain H5404_10240 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain H5404_10240 IPR011761 ATP-grasp fold H5404_10255 IPR002781 Transmembrane protein TauE-like H5404_10260 IPR000847 Transcription regulator HTH, LysR H5404_10260 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_10260 IPR005119 LysR, substrate-binding H5404_10260 IPR036390 Winged helix DNA-binding domain superfamily H5404_10265 IPR005115 Uncharacterised domain UPF0126 H5404_10270 IPR002491 ABC transporter periplasmic binding domain H5404_10270 IPR023544 ABC transporter, vitamin B12-binding protein H5404_10275 IPR004485 Cobalamin biosynthesis CobD/CbiB H5404_10275 IPR031347 Protein AmpE H5404_10280 IPR035994 Nucleoside phosphorylase superfamily H5404_10280 IPR010049 MTA/SAH nucleosidase H5404_10280 IPR000845 Nucleoside phosphorylase domain H5404_10290 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain H5404_10290 IPR023753 FAD/NAD(P)-binding domain H5404_10290 IPR036188 FAD/NAD(P)-binding domain superfamily H5404_10290 IPR009051 Alpha-helical ferredoxin H5404_10290 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 H5404_10290 IPR028261 Dihydroprymidine dehydrogenase domain II H5404_10295 IPR013785 Aldolase-type TIM barrel H5404_10295 IPR002932 Glutamate synthase domain H5404_10295 IPR017932 Glutamine amidotransferase type 2 domain H5404_10295 IPR006982 Glutamate synthase, central-N H5404_10295 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily H5404_10295 IPR002489 Glutamate synthase, alpha subunit, C-terminal H5404_10295 IPR029055 Nucleophile aminohydrolases, N-terminal H5404_10300 IPR009051 Alpha-helical ferredoxin H5404_10300 IPR023753 FAD/NAD(P)-binding domain H5404_10300 IPR028261 Dihydroprymidine dehydrogenase domain II H5404_10300 IPR036188 FAD/NAD(P)-binding domain superfamily H5404_10300 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 H5404_10305 IPR029055 Nucleophile aminohydrolases, N-terminal H5404_10305 IPR013785 Aldolase-type TIM barrel H5404_10305 IPR017932 Glutamine amidotransferase type 2 domain H5404_10305 IPR002932 Glutamate synthase domain H5404_10305 IPR006982 Glutamate synthase, central-N H5404_10305 IPR002489 Glutamate synthase, alpha subunit, C-terminal H5404_10305 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily H5404_10310 IPR023404 Radical SAM, alpha/beta horseshoe H5404_10310 IPR007197 Radical SAM H5404_10310 IPR006638 Elp3/MiaB/NifB H5404_10310 IPR005911 Protein YhcC-like H5404_10310 IPR039661 ELP3/YhcC H5404_10310 IPR032432 Radical SAM, C-terminal extension H5404_10315 IPR029016 GAF-like domain superfamily H5404_10315 IPR000160 GGDEF domain H5404_10315 IPR029787 Nucleotide cyclase H5404_10315 IPR016132 Phytochrome chromophore attachment domain H5404_10315 IPR013515 Phytochrome, central region H5404_10315 IPR003018 GAF domain H5404_10315 IPR035919 EAL domain superfamily H5404_10315 IPR001294 Phytochrome H5404_10315 IPR001633 EAL domain H5404_10320 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_10320 IPR003594 Histidine kinase/HSP90-like ATPase H5404_10320 IPR005467 Histidine kinase domain H5404_10320 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain H5404_10320 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily H5404_10320 IPR040642 Histidine kinase receptor ArcB, transmembrane domain H5404_10320 IPR011006 CheY-like superfamily H5404_10320 IPR001789 Signal transduction response regulator, receiver domain H5404_10320 IPR036641 HPT domain superfamily H5404_10320 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB H5404_10320 IPR035965 PAS domain superfamily H5404_10320 IPR013767 PAS fold H5404_10320 IPR004358 Signal transduction histidine kinase-related protein, C-terminal H5404_10320 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain H5404_10320 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily H5404_10320 IPR000700 PAS-associated, C-terminal H5404_10320 IPR000014 PAS domain H5404_10330 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_10330 IPR011006 CheY-like superfamily H5404_10330 IPR001867 OmpR/PhoB-type DNA-binding domain H5404_10330 IPR039420 Transcriptional regulatory protein WalR-like H5404_10330 IPR001789 Signal transduction response regulator, receiver domain H5404_10330 IPR016032 Signal transduction response regulator, C-terminal effector H5404_10340 IPR010203 Regulator of ribonuclease activity A H5404_10340 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein H5404_10340 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily H5404_10350 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding H5404_10350 IPR019811 Homoserine dehydrogenase, conserved site H5404_10350 IPR002912 ACT domain H5404_10350 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain H5404_10350 IPR001048 Aspartate/glutamate/uridylate kinase H5404_10350 IPR036291 NAD(P)-binding domain superfamily H5404_10350 IPR001341 Aspartate kinase H5404_10350 IPR018042 Aspartate kinase, conserved site H5404_10350 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I H5404_10350 IPR027795 CASTOR, ACT domain H5404_10350 IPR036393 Acetylglutamate kinase-like superfamily H5404_10350 IPR001342 Homoserine dehydrogenase, catalytic H5404_10355 IPR036554 GHMP kinase, C-terminal domain superfamily H5404_10355 IPR000870 Homoserine kinase H5404_10355 IPR013750 GHMP kinase, C-terminal domain H5404_10355 IPR006204 GHMP kinase N-terminal domain H5404_10355 IPR006203 GHMP kinase, ATP-binding, conserved site H5404_10355 IPR020568 Ribosomal protein S5 domain 2-type fold H5404_10355 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup H5404_10360 IPR037158 Threonine synthase, N-terminal domain superfamily H5404_10360 IPR029144 Threonine synthase, N-terminal H5404_10360 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme H5404_10360 IPR001926 Pyridoxal-phosphate dependent enzyme H5404_10360 IPR004450 Threonine synthase-like H5404_10360 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site H5404_10365 IPR001150 Glycine radical domain H5404_10365 IPR019777 Formate C-acetyltransferase glycine radical, conserved site H5404_10365 IPR011140 Autonomous glycyl radical cofactor GrcA H5404_10370 IPR001719 AP endonuclease 2 H5404_10370 IPR018246 AP endonuclease 2, zinc binding site H5404_10370 IPR036237 Xylose isomerase-like superfamily H5404_10370 IPR013022 Xylose isomerase-like, TIM barrel domain H5404_10375 IPR018085 Uracil-DNA glycosylase, active site H5404_10375 IPR002043 Uracil-DNA glycosylase family 1 H5404_10375 IPR005122 Uracil-DNA glycosylase-like H5404_10375 IPR036895 Uracil-DNA glycosylase-like domain superfamily H5404_10390 IPR001463 Sodium:alanine symporter H5404_10395 IPR005583 Peroxide stress protein YaaA H5404_10400 IPR028621 ATP-dependent RNA helicase SrmB H5404_10400 IPR014001 Helicase superfamily 1/2, ATP-binding domain H5404_10400 IPR001650 Helicase, C-terminal H5404_10400 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_10400 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site H5404_10400 IPR011545 DEAD/DEAH box helicase domain H5404_10400 IPR014014 RNA helicase, DEAD-box type, Q motif H5404_10405 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_10405 IPR002052 DNA methylase, N-6 adenine-specific, conserved site H5404_10405 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase H5404_10405 IPR007848 Methyltransferase small domain H5404_10410 IPR004685 Branched-chain amino acid transport system II carrier protein H5404_10415 IPR010086 Flavodoxin, long chain H5404_10415 IPR029039 Flavoprotein-like superfamily H5404_10415 IPR001226 Flavodoxin, conserved site H5404_10415 IPR008254 Flavodoxin/nitric oxide synthase H5404_10420 IPR011010 DNA breaking-rejoining enzyme, catalytic core H5404_10420 IPR023009 Tyrosine recombinase XerC/XerD H5404_10420 IPR011932 Tyrosine recombinase XerD H5404_10420 IPR004107 Integrase, SAM-like, N-terminal H5404_10420 IPR010998 Integrase/recombinase, N-terminal H5404_10420 IPR002104 Integrase, catalytic domain H5404_10420 IPR013762 Integrase-like, catalytic domain superfamily H5404_10425 IPR036249 Thioredoxin-like superfamily H5404_10425 IPR012336 Thioredoxin-like fold H5404_10425 IPR033954 Disulphide bond isomerase, DsbC/G H5404_10425 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal H5404_10425 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily H5404_10425 IPR017937 Thioredoxin, conserved site H5404_10425 IPR013766 Thioredoxin domain H5404_10430 IPR038763 DHH phosphoesterase superfamily H5404_10430 IPR041122 RecJ, OB domain H5404_10430 IPR004610 Bacterial RecJ exonuclease H5404_10430 IPR001667 DDH domain H5404_10430 IPR003156 DHHA1 domain H5404_10440 IPR012340 Nucleic acid-binding, OB-fold H5404_10440 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type H5404_10440 IPR006195 Aminoacyl-tRNA synthetase, class II H5404_10440 IPR002313 Lysine-tRNA ligase, class II H5404_10440 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal H5404_10440 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) H5404_10445 IPR001789 Signal transduction response regulator, receiver domain H5404_10445 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_10445 IPR002197 DNA binding HTH domain, Fis-type H5404_10445 IPR009057 Homeobox-like domain superfamily H5404_10445 IPR011006 CheY-like superfamily H5404_10445 IPR003593 AAA+ ATPase domain H5404_10445 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 H5404_10445 IPR025944 Sigma-54 interaction domain, conserved site H5404_10445 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 H5404_10445 IPR002078 RNA polymerase sigma factor 54 interaction domain H5404_10455 IPR036812 NADP-dependent oxidoreductase domain superfamily H5404_10455 IPR023210 NADP-dependent oxidoreductase domain H5404_10455 IPR020471 Aldo/keto reductase H5404_10465 IPR004230 DNA mismatch repair protein MutH H5404_10465 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II H5404_10465 IPR011335 Restriction endonuclease type II-like H5404_10465 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily H5404_10470 IPR022927 RNA pyrophosphohydrolase RppH H5404_10470 IPR020476 NUDIX hydrolase H5404_10470 IPR015797 NUDIX hydrolase-like domain superfamily H5404_10470 IPR020084 NUDIX hydrolase, conserved site H5404_10470 IPR000086 NUDIX hydrolase domain H5404_10475 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily H5404_10475 IPR036637 Phosphohistidine domain superfamily H5404_10475 IPR036618 PtsI, HPr-binding domain superfamily H5404_10475 IPR008731 Phosphotransferase system, enzyme I N-terminal H5404_10475 IPR000121 PEP-utilising enzyme, C-terminal H5404_10475 IPR003018 GAF domain H5404_10475 IPR006318 Phosphotransferase system, enzyme I-like H5404_10475 IPR008279 PEP-utilising enzyme, mobile domain H5404_10475 IPR018274 PEP-utilising enzyme, active site H5404_10475 IPR023151 PEP-utilising enzyme, conserved site H5404_10475 IPR029016 GAF-like domain superfamily H5404_10475 IPR040442 Pyruvate kinase-like domain superfamily H5404_10480 IPR002781 Transmembrane protein TauE-like H5404_10485 IPR001640 Phosphatidylglycerol--prolipoprotein diacylglyceryl transferase Lgt H5404_10495 IPR000398 Thymidylate synthase H5404_10495 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily H5404_10495 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain H5404_10495 IPR020940 Thymidylate synthase, active site H5404_10510 IPR001387 Cro/C1-type helix-turn-helix domain H5404_10510 IPR010982 Lambda repressor-like, DNA-binding domain superfamily H5404_10520 IPR017508 HipA, N-terminal subdomain 1 H5404_10520 IPR012893 HipA-like, C-terminal H5404_10545 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain H5404_10555 IPR041451 RecD-like DNA helicase, SH3 domain H5404_10555 IPR029493 RecD helicase-like helix-hairpin-helix domain H5404_10555 IPR003593 AAA+ ATPase domain H5404_10555 IPR027785 UvrD-like helicase C-terminal domain H5404_10555 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_10555 IPR006345 RecD-like DNA helicase H5404_10575 IPR013762 Integrase-like, catalytic domain superfamily H5404_10575 IPR004107 Integrase, SAM-like, N-terminal H5404_10575 IPR011010 DNA breaking-rejoining enzyme, catalytic core H5404_10575 IPR010998 Integrase/recombinase, N-terminal H5404_10575 IPR011931 Tyrosine recombinase XerC H5404_10575 IPR023009 Tyrosine recombinase XerC/XerD H5404_10575 IPR002104 Integrase, catalytic domain H5404_10590 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein H5404_10590 IPR003841 Sodium-dependent phosphate transport protein H5404_10595 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_10595 IPR000847 Transcription regulator HTH, LysR H5404_10595 IPR005119 LysR, substrate-binding H5404_10595 IPR036390 Winged helix DNA-binding domain superfamily H5404_10600 IPR036390 Winged helix DNA-binding domain superfamily H5404_10600 IPR001845 HTH ArsR-type DNA-binding domain H5404_10600 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_10600 IPR011991 ArsR-like helix-turn-helix domain H5404_10605 IPR002583 Ribosomal protein S20 H5404_10605 IPR036510 Ribosomal protein S20 superfamily H5404_10610 IPR004268 Peptidoglycan biosynthesis protein MurJ H5404_10615 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold H5404_10615 IPR023465 Riboflavin kinase domain superfamily H5404_10615 IPR002606 Riboflavin kinase, bacterial H5404_10615 IPR023468 Riboflavin kinase H5404_10615 IPR015864 FAD synthetase H5404_10615 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic H5404_10620 IPR002301 Isoleucine-tRNA ligase H5404_10620 IPR033708 Isoleucyl tRNA synthetase type 1, anticodon-binding domain H5404_10620 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain H5404_10620 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding H5404_10620 IPR002300 Aminoacyl-tRNA synthetase, class Ia H5404_10620 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site H5404_10620 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold H5404_10620 IPR010663 Zinc finger, FPG/IleRS-type H5404_10620 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding H5404_10620 IPR023585 Isoleucine-tRNA ligase, type 1 H5404_10625 IPR001872 Peptidase A8, signal peptidase II H5404_10630 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain H5404_10635 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase H5404_10640 IPR007492 LytTR DNA-binding domain H5404_10640 IPR011006 CheY-like superfamily H5404_10640 IPR001789 Signal transduction response regulator, receiver domain H5404_10645 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_10645 IPR010559 Signal transduction histidine kinase, internal region H5404_10645 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region H5404_10645 IPR003018 GAF domain H5404_10650 IPR003706 CstA, N-terminal domain H5404_10665 IPR001347 Sugar isomerase (SIS) H5404_10665 IPR005486 Glucokinase regulatory protein, conserved site H5404_10665 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ H5404_10665 IPR040190 N-acetylmuramic acid 6-phosphate etherase/glucokinase regulatory protein H5404_10670 IPR005338 Anhydro-N-acetylmuramic acid kinase H5404_10675 IPR022956 Beta-hexosaminidase, bacterial H5404_10675 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily H5404_10675 IPR019800 Glycoside hydrolase, family 3, active site H5404_10675 IPR001764 Glycoside hydrolase, family 3, N-terminal H5404_10675 IPR017853 Glycoside hydrolase superfamily H5404_10680 IPR006219 DHAP synthase, class 1 H5404_10680 IPR006218 DAHP synthetase I/KDSA H5404_10680 IPR013785 Aldolase-type TIM barrel H5404_10685 IPR002701 Chorismate mutase II, prokaryotic-type H5404_10685 IPR036291 NAD(P)-binding domain superfamily H5404_10685 IPR036979 Chorismate mutase domain superfamily H5404_10685 IPR003099 Prephenate dehydrogenase H5404_10685 IPR036263 Chorismate mutase type II superfamily H5404_10685 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein H5404_10685 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily H5404_10685 IPR011277 Chorismate mutase, T-protein H5404_10690 IPR011055 Duplicated hybrid motif H5404_10690 IPR007340 Opacity-associated protein A H5404_10690 IPR016047 Peptidase M23 H5404_10695 IPR027021 Cyclic di-GMP binding protein, PA4608 type H5404_10695 IPR009875 PilZ domain H5404_10700 IPR017871 ABC transporter, conserved site H5404_10700 IPR003593 AAA+ ATPase domain H5404_10700 IPR003439 ABC transporter-like H5404_10700 IPR032781 ABC-transporter extension domain H5404_10700 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_10700 IPR022374 Energy-dependent translational throttle protein EttA H5404_10705 IPR012289 Lytic transglycosylase, superhelical linker H5404_10705 IPR000189 Prokaryotic transglycosylase, active site H5404_10705 IPR008939 Lytic transglycosylase, superhelical U-shaped H5404_10705 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily H5404_10705 IPR008258 Transglycosylase SLT domain 1 H5404_10705 IPR023346 Lysozyme-like domain superfamily H5404_10710 IPR038116 TrpR-like superfamily H5404_10710 IPR010921 Trp repressor/replication initiator H5404_10710 IPR000831 Trp repressor H5404_10710 IPR013335 Trp repressor, bacterial H5404_10715 IPR002786 Inosine/xanthosine triphosphatase H5404_10715 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 H5404_10715 IPR029001 Inosine triphosphate pyrophosphatase-like H5404_10720 IPR002912 ACT domain H5404_10720 IPR036263 Chorismate mutase type II superfamily H5404_10720 IPR036979 Chorismate mutase domain superfamily H5404_10720 IPR010952 Chorismate mutase, gammaproteobacteria H5404_10720 IPR001086 Prephenate dehydratase H5404_10720 IPR018528 Prephenate dehydratase, conserved site H5404_10720 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase H5404_10720 IPR002701 Chorismate mutase II, prokaryotic-type H5404_10725 IPR036567 Ribosome hibernation promotion factor-like H5404_10725 IPR003489 Ribosome hibernation promoting factor/RaiA H5404_10730 IPR023346 Lysozyme-like domain superfamily H5404_10730 IPR000189 Prokaryotic transglycosylase, active site H5404_10730 IPR008258 Transglycosylase SLT domain 1 H5404_10735 IPR011990 Tetratricopeptide-like helical domain superfamily H5404_10735 IPR039565 Outer membrane lipoprotein BamD-like H5404_10735 IPR017689 Outer membrane protein assembly factor BamD H5404_10740 IPR006145 Pseudouridine synthase, RsuA/RluA H5404_10740 IPR002942 RNA-binding S4 domain H5404_10740 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site H5404_10740 IPR020103 Pseudouridine synthase, catalytic domain superfamily H5404_10740 IPR036986 RNA-binding S4 domain superfamily H5404_10740 IPR006225 Pseudouridine synthase, RluC/RluD H5404_10745 IPR038371 Multi-copper polyphenol oxidoreductase superfamily H5404_10745 IPR003730 Multi-copper polyphenol oxidoreductase H5404_10745 IPR011324 Cytotoxic necrotizing factor-like, catalytic H5404_10750 IPR003959 ATPase, AAA-type, core H5404_10750 IPR017730 Chaperonin ClpB H5404_10750 IPR019489 Clp ATPase, C-terminal H5404_10750 IPR036628 Clp, N-terminal domain superfamily H5404_10750 IPR041546 ClpA/ClpB, AAA lid domain H5404_10750 IPR001270 ClpA/B family H5404_10750 IPR018368 ClpA/B, conserved site 1 H5404_10750 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_10750 IPR004176 Clp, N-terminal H5404_10750 IPR003593 AAA+ ATPase domain H5404_10750 IPR028299 ClpA/B, conserved site 2 H5404_10795 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily H5404_10795 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase H5404_10805 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain H5404_10805 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site H5404_10810 IPR001539 Peptidase U32 H5404_10810 IPR032525 Peptidase family U32, C-terminal H5404_10815 IPR007476 Putative exonuclease, RdgC H5404_10820 IPR039420 Transcriptional regulatory protein WalR-like H5404_10820 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_10820 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB H5404_10820 IPR001867 OmpR/PhoB-type DNA-binding domain H5404_10820 IPR001789 Signal transduction response regulator, receiver domain H5404_10820 IPR011006 CheY-like superfamily H5404_10825 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain H5404_10825 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR H5404_10825 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily H5404_10825 IPR003594 Histidine kinase/HSP90-like ATPase H5404_10825 IPR000014 PAS domain H5404_10825 IPR021766 Phosphate regulon sensor protein PhoR H5404_10825 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_10825 IPR004358 Signal transduction histidine kinase-related protein, C-terminal H5404_10825 IPR005467 Histidine kinase domain H5404_10825 IPR035965 PAS domain superfamily H5404_10825 IPR013767 PAS fold H5404_10830 IPR011862 Phosphate binding protein H5404_10830 IPR024370 PBP domain H5404_10835 IPR030673 Pyrophosphatase, GppA/Ppx-type H5404_10835 IPR003695 Ppx/GppA phosphatase H5404_10835 IPR022371 Exopolyphosphatase H5404_10840 IPR003414 Polyphosphate kinase H5404_10840 IPR041108 Polyphosphate kinase, C-terminal domain 1 H5404_10840 IPR024953 Polyphosphate kinase middle domain H5404_10840 IPR025200 Polyphosphate kinase C-terminal domain 2 H5404_10840 IPR025198 Polyphosphate kinase N-terminal domain H5404_10840 IPR036830 Polyphosphate kinase middle domain superfamily H5404_10840 IPR001736 Phospholipase D/Transphosphatidylase H5404_10840 IPR036832 Polyphosphate kinase N-terminal domain superfamily H5404_10845 IPR000515 ABC transporter type 1, transmembrane domain MetI-like H5404_10845 IPR035906 MetI-like superfamily H5404_10845 IPR011864 Phosphate ABC transporter, permease protein PstC H5404_10850 IPR005672 Phosphate transport system permease protein PstA H5404_10850 IPR035906 MetI-like superfamily H5404_10850 IPR000515 ABC transporter type 1, transmembrane domain MetI-like H5404_10855 IPR003439 ABC transporter-like H5404_10855 IPR003593 AAA+ ATPase domain H5404_10855 IPR017871 ABC transporter, conserved site H5404_10855 IPR015850 ABC transporter, phosphate import, PstB H5404_10855 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_10855 IPR005670 Phosphate transport system permease protein 1 H5404_10860 IPR038078 PhoU-like domain superfamily H5404_10860 IPR028366 Phosphate transport system protein PhoU H5404_10860 IPR026022 PhoU domain H5404_10865 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_10865 IPR022488 Polyphosphate kinase-2-related H5404_10865 IPR016898 Polyphosphate kinase 2 H5404_10865 IPR022486 Polyphosphate kinase 2, PA0141 H5404_10870 IPR005627 Copper homeostasis protein CutC H5404_10870 IPR023648 Copper homeostasis CutC domain H5404_10870 IPR036822 Copper homeostasis (CutC) domain superfamily H5404_10875 IPR019479 Peroxiredoxin, C-terminal H5404_10875 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant H5404_10875 IPR013766 Thioredoxin domain H5404_10875 IPR024706 Peroxiredoxin, AhpC-type H5404_10875 IPR036249 Thioredoxin-like superfamily H5404_10880 IPR036390 Winged helix DNA-binding domain superfamily H5404_10880 IPR000847 Transcription regulator HTH, LysR H5404_10880 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_10880 IPR005119 LysR, substrate-binding H5404_10885 IPR019830 Malate synthase, conserved site H5404_10885 IPR001465 Malate synthase H5404_10885 IPR011076 Malate synthase-like superfamily H5404_10885 IPR006252 Malate synthase A H5404_10890 IPR040442 Pyruvate kinase-like domain superfamily H5404_10890 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily H5404_10890 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site H5404_10890 IPR039556 ICL/PEPM domain H5404_10890 IPR006254 Isocitrate lyase H5404_10895 IPR000644 CBS domain H5404_10905 IPR042119 QueA, domain 2 H5404_10905 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily H5404_10905 IPR042118 QueA, domain 1 H5404_10905 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA H5404_10910 IPR004803 tRNA-guanine transglycosylase H5404_10910 IPR036511 Queuine tRNA-ribosyltransferase-like H5404_10910 IPR002616 tRNA-guanine(15) transglycosylase-like H5404_10915 IPR003849 Preprotein translocase YajC H5404_10920 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site H5404_10920 IPR022645 Protein-export membrane protein SecD/SecF, bacterial H5404_10920 IPR001036 Acriflavin resistance protein H5404_10920 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial H5404_10920 IPR005791 Protein translocase subunit SecD H5404_10920 IPR027398 SecD export protein N-terminal TM domain H5404_10925 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site H5404_10925 IPR005665 Protein-export membrane protein SecF, bacterial H5404_10925 IPR022645 Protein-export membrane protein SecD/SecF, bacterial H5404_10925 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial H5404_10930 IPR000760 Inositol monophosphatase-like H5404_10930 IPR033942 Inositol monophosphatase H5404_10930 IPR020583 Inositol monophosphatase, metal-binding site H5404_10930 IPR020550 Inositol monophosphatase, conserved site H5404_10930 IPR022337 Inositol monophosphatase, SuhB H5404_10935 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal H5404_10935 IPR001537 tRNA/rRNA methyltransferase, SpoU type H5404_10935 IPR004384 RNA methyltransferase TrmJ/LasT H5404_10935 IPR029028 Alpha/beta knot methyltransferases H5404_10940 IPR036390 Winged helix DNA-binding domain superfamily H5404_10940 IPR010242 Transcription factor HTH, IscR H5404_10940 IPR030489 Transcription regulator Rrf2-type, conserved site H5404_10940 IPR000944 Transcription regulator Rrf2-type H5404_10940 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_10945 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site H5404_10945 IPR010240 Cysteine desulfurase IscS H5404_10945 IPR000192 Aminotransferase class V domain H5404_10945 IPR016454 Cysteine desulfurase H5404_10945 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 H5404_10945 IPR015421 Pyridoxal phosphate-dependent transferase, major domain H5404_10945 IPR015424 Pyridoxal phosphate-dependent transferase H5404_10950 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal H5404_10950 IPR011339 ISC system FeS cluster assembly, IscU scaffold H5404_10955 IPR000361 FeS cluster biogenesis H5404_10955 IPR016092 FeS cluster insertion protein H5404_10955 IPR017870 FeS cluster insertion, C-terminal, conserved site H5404_10955 IPR035903 HesB-like domain superfamily H5404_10955 IPR011302 Iron-binding protein IscA, proteobacteria H5404_10960 IPR004640 Co-chaperone Hsc20 H5404_10960 IPR036386 HscB, C-terminal domain superfamily H5404_10960 IPR001623 DnaJ domain H5404_10960 IPR036869 Chaperone J-domain superfamily H5404_10960 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain H5404_10965 IPR042039 HscA chaperone, nucleotide-binding domain H5404_10965 IPR018181 Heat shock protein 70, conserved site H5404_10965 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily H5404_10965 IPR013126 Heat shock protein 70 family H5404_10965 IPR010236 ISC system FeS cluster assembly, HscA chaperone H5404_10965 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily H5404_10970 IPR012675 Beta-grasp domain superfamily H5404_10970 IPR036010 2Fe-2S ferredoxin-like superfamily H5404_10970 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain H5404_10970 IPR018298 Adrenodoxin, iron-sulphur binding site H5404_10970 IPR001055 Adrenodoxin H5404_10970 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria H5404_10975 IPR036762 IscX-like superfamily H5404_10975 IPR007479 ISC system FeS cluster assembly, IscX H5404_10980 IPR001346 Interferon regulatory factor DNA-binding domain H5404_10980 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal H5404_10980 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B H5404_10980 IPR008330 Peptidase M17, peptidase B H5404_10985 IPR001564 Nucleoside diphosphate kinase H5404_10985 IPR023005 Nucleoside diphosphate kinase, active site H5404_10985 IPR034907 Nucleoside diphosphate kinase-like domain H5404_10985 IPR036850 Nucleoside diphosphate kinase-like domain superfamily H5404_10990 IPR007197 Radical SAM H5404_10990 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr H5404_10990 IPR027492 Dual-specificity RNA methyltransferase RlmN H5404_10990 IPR040072 Methyltransferase (Class A) H5404_10990 IPR013785 Aldolase-type TIM barrel H5404_10995 IPR025194 Domain of unknown function DUF4115 H5404_10995 IPR001387 Cro/C1-type helix-turn-helix domain H5404_10995 IPR023690 Cytoskeleton protein RodZ H5404_10995 IPR010982 Lambda repressor-like, DNA-binding domain superfamily H5404_11000 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type H5404_11000 IPR011005 Dihydropteroate synthase-like H5404_11000 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial H5404_11005 IPR004154 Anticodon-binding H5404_11005 IPR033656 Histidyl-anticodon-binding H5404_11005 IPR006195 Aminoacyl-tRNA synthetase, class II H5404_11005 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit H5404_11005 IPR036621 Anticodon-binding domain superfamily H5404_11005 IPR015807 Histidine-tRNA ligase H5404_11005 IPR041715 Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain H5404_11010 IPR011990 Tetratricopeptide-like helical domain superfamily H5404_11010 IPR026039 Uncharacterised protein family UPF0070 H5404_11010 IPR018704 Tetratricopeptide repeat-like domain H5404_11015 IPR015943 WD40/YVTN repeat-like-containing domain superfamily H5404_11015 IPR002372 Pyrrolo-quinoline quinone repeat H5404_11015 IPR017687 Outer membrane protein assembly factor BamB H5404_11015 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat H5404_11015 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily H5404_11020 IPR032859 GTPase Der, C-terminal KH-domain-like H5404_11020 IPR005225 Small GTP-binding protein domain H5404_11020 IPR015946 K homology domain-like, alpha/beta H5404_11020 IPR006073 GTP binding domain H5404_11020 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_11020 IPR003593 AAA+ ATPase domain H5404_11020 IPR016484 GTP-binding protein EngA H5404_11020 IPR031166 EngA-type guanine nucleotide-binding (G) domain H5404_11035 IPR003753 Exonuclease VII, large subunit H5404_11035 IPR025824 OB-fold nucleic acid binding domain H5404_11035 IPR020579 Exonuclease VII, large subunit, C-terminal H5404_11040 IPR001093 IMP dehydrogenase/GMP reductase H5404_11040 IPR005990 Inosine-5'-monophosphate dehydrogenase H5404_11040 IPR000644 CBS domain H5404_11040 IPR013785 Aldolase-type TIM barrel H5404_11040 IPR015875 IMP dehydrogenase / GMP reductase, conserved site H5404_11045 IPR001674 GMP synthase, C-terminal H5404_11045 IPR029062 Class I glutamine amidotransferase-like H5404_11045 IPR017926 Glutamine amidotransferase H5404_11045 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold H5404_11045 IPR022310 NAD/GMP synthase H5404_11045 IPR022955 GMP synthase H5404_11045 IPR025777 GMP synthetase ATP pyrophosphatase domain H5404_11045 IPR004739 GMP synthase, glutamine amidotransferase H5404_11050 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal H5404_11055 IPR013783 Immunoglobulin-like fold H5404_11055 IPR017853 Glycoside hydrolase superfamily H5404_11055 IPR036573 Carbohydrate-binding module superfamily 5/12 H5404_11055 IPR009470 Chitinase, C-terminal H5404_11055 IPR011583 Chitinase II H5404_11055 IPR029070 Chitinase insertion domain superfamily H5404_11055 IPR001223 Glycoside hydrolase family 18, catalytic domain H5404_11055 IPR003610 Carbohydrate-binding module family 5/12 H5404_11060 IPR000791 Acetate transporter GPR1/FUN34/SatP family H5404_11070 IPR001463 Sodium:alanine symporter H5404_11075 IPR023080 D-amino acid dehydrogenase DadA H5404_11075 IPR036188 FAD/NAD(P)-binding domain superfamily H5404_11075 IPR006076 FAD dependent oxidoreductase H5404_11080 IPR036390 Winged helix DNA-binding domain superfamily H5404_11080 IPR037418 HTH-type transcriptional regulator TrpI, PBP2 H5404_11080 IPR000847 Transcription regulator HTH, LysR H5404_11080 IPR005119 LysR, substrate-binding H5404_11080 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_11095 IPR033932 YtcJ like H5404_11095 IPR013108 Amidohydrolase 3 H5404_11095 IPR011059 Metal-dependent hydrolase, composite domain superfamily H5404_11095 IPR032466 Metal-dependent hydrolase H5404_11100 IPR015424 Pyridoxal phosphate-dependent transferase H5404_11100 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 H5404_11100 IPR015421 Pyridoxal phosphate-dependent transferase, major domain H5404_11100 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase H5404_11100 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme H5404_11105 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 H5404_11105 IPR015421 Pyridoxal phosphate-dependent transferase, major domain H5404_11105 IPR015424 Pyridoxal phosphate-dependent transferase H5404_11105 IPR005814 Aminotransferase class-III H5404_11125 IPR000182 GNAT domain H5404_11125 IPR016181 Acyl-CoA N-acyltransferase H5404_11125 IPR003010 Carbon-nitrogen hydrolase H5404_11125 IPR036526 Carbon-nitrogen hydrolase superfamily H5404_11125 IPR001110 Uncharacterised protein family UPF0012, conserved site H5404_11130 IPR036390 Winged helix DNA-binding domain superfamily H5404_11130 IPR000847 Transcription regulator HTH, LysR H5404_11130 IPR005119 LysR, substrate-binding H5404_11130 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_11170 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site H5404_11170 IPR001525 C-5 cytosine methyltransferase H5404_11170 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_11255 IPR012340 Nucleic acid-binding, OB-fold H5404_11255 IPR011129 Cold shock domain H5404_11255 IPR019844 Cold-shock (CSD) domain H5404_11255 IPR002059 Cold-shock protein, DNA-binding H5404_11255 IPR012156 Cold shock, CspA H5404_11275 IPR002059 Cold-shock protein, DNA-binding H5404_11275 IPR012156 Cold shock, CspA H5404_11275 IPR011129 Cold shock domain H5404_11275 IPR012340 Nucleic acid-binding, OB-fold H5404_11275 IPR019844 Cold-shock (CSD) domain H5404_11280 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_11300 IPR006118 Recombinase, conserved site H5404_11300 IPR009057 Homeobox-like domain superfamily H5404_11300 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily H5404_11300 IPR006120 Resolvase, HTH domain H5404_11300 IPR006119 Resolvase, N-terminal catalytic domain H5404_11305 IPR038365 EcoRII, C-terminal domain superfamily H5404_11305 IPR023372 Restriction endonuclease, type II, EcoRII, N-terminal H5404_11305 IPR011335 Restriction endonuclease type II-like H5404_11305 IPR015109 Restriction endonuclease, type II, EcoRII, C-terminal H5404_11305 IPR015300 DNA-binding pseudobarrel domain superfamily H5404_11310 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site H5404_11310 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_11310 IPR018117 DNA methylase, C-5 cytosine-specific, active site H5404_11310 IPR040743 DNA methylase N-terminal domain H5404_11310 IPR001525 C-5 cytosine methyltransferase H5404_11325 IPR011010 DNA breaking-rejoining enzyme, catalytic core H5404_11325 IPR013762 Integrase-like, catalytic domain superfamily H5404_11325 IPR002104 Integrase, catalytic domain H5404_11325 IPR038488 Integrase, DNA-binding domain superfamily H5404_11325 IPR025166 Integrase, DNA-binding domain H5404_11325 IPR010998 Integrase/recombinase, N-terminal H5404_11335 IPR023620 Small protein B H5404_11335 IPR000037 SsrA-binding protein H5404_11335 IPR020081 SsrA-binding protein, conserved site H5404_11340 IPR023393 START-like domain superfamily H5404_11340 IPR005031 Coenzyme Q-binding protein COQ10, START domain H5404_11345 IPR037021 RnfH superfamily H5404_11345 IPR005346 RnfH protein H5404_11345 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp H5404_11350 IPR026592 Outer membrane protein assembly factor BamE H5404_11350 IPR037873 BamE-like H5404_11350 IPR007450 Lipoprotein SmpA/OmlA H5404_11355 IPR004604 DNA recombination/repair protein RecN H5404_11355 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_11355 IPR003395 RecF/RecN/SMC, N-terminal H5404_11365 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal H5404_11365 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal H5404_11365 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily H5404_11365 IPR002504 NAD kinase H5404_11370 IPR000740 GrpE nucleotide exchange factor H5404_11370 IPR009012 GrpE nucleotide exchange factor, head H5404_11370 IPR013805 GrpE nucleotide exchange factor, coiled-coil H5404_11375 IPR001991 Sodium:dicarboxylate symporter H5404_11375 IPR036458 Sodium:dicarboxylate symporter superfamily H5404_11375 IPR018107 Sodium:dicarboxylate symporter, conserved site H5404_11375 IPR023954 C4-dicarboxylate transport protein H5404_11380 IPR018181 Heat shock protein 70, conserved site H5404_11380 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily H5404_11380 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily H5404_11380 IPR013126 Heat shock protein 70 family H5404_11380 IPR012725 Chaperone DnaK H5404_11385 IPR002939 Chaperone DnaJ, C-terminal H5404_11385 IPR018253 DnaJ domain, conserved site H5404_11385 IPR001623 DnaJ domain H5404_11385 IPR001305 Heat shock protein DnaJ, cysteine-rich domain H5404_11385 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily H5404_11385 IPR036869 Chaperone J-domain superfamily H5404_11385 IPR012724 Chaperone DnaJ H5404_11385 IPR008971 HSP40/DnaJ peptide-binding H5404_11390 IPR001082 Fimbrial protein pilin H5404_11390 IPR012902 Prokaryotic N-terminal methylation site H5404_11395 IPR001082 Fimbrial protein pilin H5404_11395 IPR012902 Prokaryotic N-terminal methylation site H5404_11415 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT H5404_11415 IPR011540 AbgT, Proteobacteria H5404_11420 IPR016193 Cytidine deaminase-like H5404_11420 IPR028883 tRNA-specific adenosine deaminase H5404_11420 IPR016192 APOBEC/CMP deaminase, zinc-binding H5404_11420 IPR002125 Cytidine and deoxycytidylate deaminase domain H5404_11425 IPR023346 Lysozyme-like domain superfamily H5404_11425 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF H5404_11425 IPR000189 Prokaryotic transglycosylase, active site H5404_11425 IPR008258 Transglycosylase SLT domain 1 H5404_11425 IPR023703 Membrane-bound lytic murein transglycosylase F H5404_11430 IPR010918 PurM-like, C-terminal domain H5404_11430 IPR041609 Phosphoribosylformylglycinamidine synthase, linker domain H5404_11430 IPR010073 Phosphoribosylformylglycinamidine synthase PurL H5404_11430 IPR017926 Glutamine amidotransferase H5404_11430 IPR040707 Phosphoribosylformylglycinamidine synthase, N-terminal H5404_11430 IPR029062 Class I glutamine amidotransferase-like H5404_11430 IPR036676 PurM-like, C-terminal domain superfamily H5404_11430 IPR036921 PurM-like, N-terminal domain superfamily H5404_11430 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily H5404_11455 IPR002933 Peptidase M20 H5404_11455 IPR011650 Peptidase M20, dimerisation domain H5404_11455 IPR001160 Peptidase M20C, Xaa-His dipeptidase H5404_11460 IPR026033 Azaguanine-like transporters H5404_11460 IPR006043 Xanthine/uracil/vitamin C permease H5404_11465 IPR029057 Phosphoribosyltransferase-like H5404_11465 IPR000836 Phosphoribosyltransferase domain H5404_11465 IPR023747 Xanthine-guanine phosphoribosyltransferase H5404_11470 IPR010520 UPF0255 family H5404_11470 IPR029058 Alpha/Beta hydrolase fold H5404_11475 IPR038208 Sigma factor-binding protein Crl superfamily H5404_11475 IPR009986 Sigma factor-binding transcriptional regulator Crl H5404_11480 IPR036393 Acetylglutamate kinase-like superfamily H5404_11480 IPR019797 Glutamate 5-kinase, conserved site H5404_11480 IPR036974 PUA domain superfamily H5404_11480 IPR015947 PUA-like superfamily H5404_11480 IPR002478 PUA domain H5404_11480 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase H5404_11480 IPR001048 Aspartate/glutamate/uridylate kinase H5404_11480 IPR011529 Glutamate 5-kinase H5404_11480 IPR001057 Glutamate/acetylglutamate kinase H5404_11480 IPR041739 Glutamate-5-kinase domain H5404_11485 IPR016161 Aldehyde/histidinol dehydrogenase H5404_11485 IPR016163 Aldehyde dehydrogenase, C-terminal H5404_11485 IPR000965 GPR domain H5404_11485 IPR012134 Glutamate-5-semialdehyde dehydrogenase H5404_11485 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site H5404_11485 IPR015590 Aldehyde dehydrogenase domain H5404_11485 IPR016162 Aldehyde dehydrogenase, N-terminal H5404_11490 IPR005144 ATP-cone domain H5404_11490 IPR003796 Ribonucleotide reductase regulator NrdR-like H5404_11495 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal H5404_11495 IPR011549 Riboflavin-specific deaminase, C-terminal H5404_11495 IPR004794 Riboflavin biosynthesis protein RibD H5404_11495 IPR016193 Cytidine deaminase-like H5404_11495 IPR002125 Cytidine and deoxycytidylate deaminase domain H5404_11495 IPR016192 APOBEC/CMP deaminase, zinc-binding H5404_11495 IPR024072 Dihydrofolate reductase-like domain superfamily H5404_11500 IPR026017 Lumazine-binding domain H5404_11500 IPR001783 Lumazine-binding protein H5404_11500 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily H5404_11500 IPR017938 Riboflavin synthase-like beta-barrel H5404_11505 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily H5404_11505 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB H5404_11505 IPR032677 GTP cyclohydrolase II H5404_11505 IPR036144 RibA-like superfamily H5404_11510 IPR002180 Lumazine/riboflavin synthase H5404_11510 IPR034964 Lumazine synthase H5404_11510 IPR036467 Lumazine/riboflavin synthase superfamily H5404_11515 IPR011605 NusB antitermination factor H5404_11515 IPR035926 NusB-like superfamily H5404_11515 IPR006027 NusB/RsmB/TIM44 H5404_11520 IPR036676 PurM-like, C-terminal domain superfamily H5404_11520 IPR006283 Thiamine-monophosphate kinase H5404_11520 IPR010918 PurM-like, C-terminal domain H5404_11520 IPR016188 PurM-like, N-terminal domain H5404_11520 IPR036921 PurM-like, N-terminal domain superfamily H5404_11525 IPR026037 Phosphatidylglycerophosphatase A H5404_11525 IPR036681 PgpA-like superfamily H5404_11525 IPR007686 YutG/PgpA domain H5404_11530 IPR005475 Transketolase-like, pyrimidine-binding domain H5404_11530 IPR033248 Transketolase, C-terminal domain H5404_11530 IPR020826 Transketolase binding site H5404_11530 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II H5404_11530 IPR029061 Thiamin diphosphate-binding fold H5404_11530 IPR005477 Deoxyxylulose-5-phosphate synthase H5404_11530 IPR005474 Transketolase, N-terminal H5404_11535 IPR000092 Polyprenyl synthetase H5404_11535 IPR033749 Polyprenyl synthetase, conserved site H5404_11535 IPR008949 Isoprenoid synthase domain superfamily H5404_11540 IPR003761 Exonuclease VII, small subunit H5404_11540 IPR037004 Exonuclease VII, small subunit superfamily H5404_11545 IPR000540 Flagellar motor protein MotA, conserved site H5404_11545 IPR002898 MotA/TolQ/ExbB proton channel H5404_11550 IPR006664 Outer membrane protein, bacterial H5404_11550 IPR006690 Outer membrane protein, OmpA-like, conserved site H5404_11550 IPR006665 OmpA-like domain H5404_11550 IPR036737 OmpA-like domain superfamily H5404_11555 IPR004114 THUMP domain H5404_11555 IPR020536 Thil, AANH domain H5404_11555 IPR026340 Thiazole biosynthesis domain H5404_11555 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold H5404_11555 IPR003720 tRNA sulfurtransferase ThiI H5404_11555 IPR036873 Rhodanese-like domain superfamily H5404_11555 IPR001763 Rhodanese-like domain H5404_11560 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_11560 IPR036390 Winged helix DNA-binding domain superfamily H5404_11560 IPR000847 Transcription regulator HTH, LysR H5404_11560 IPR005119 LysR, substrate-binding H5404_11570 IPR006696 Protein of unknown function DUF423 H5404_11575 IPR002877 Ribosomal RNA methyltransferase FtsJ domain H5404_11575 IPR040739 RlmM ferredoxin-like domain H5404_11575 IPR011224 Ribosomal RNA large subunit methyltransferase M H5404_11575 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_11580 IPR040255 Non-specific endonuclease H5404_11580 IPR020821 Extracellular Endonuclease, subunit A H5404_11580 IPR018524 DNA/RNA non-specific endonuclease, active site H5404_11580 IPR001604 DNA/RNA non-specific endonuclease H5404_11585 IPR002421 5'-3' exonuclease, N-terminal H5404_11585 IPR022895 Flap endonuclease Xni H5404_11585 IPR036279 5'-3' exonuclease, C-terminal domain superfamily H5404_11585 IPR029060 PIN-like domain superfamily H5404_11585 IPR008918 Helix-hairpin-helix motif, class 2 H5404_11585 IPR038969 Flap endonuclease H5404_11585 IPR020045 DNA polymerase I-like, H3TH domain H5404_11585 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal H5404_11590 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal H5404_11590 IPR021826 Domain of unknown function DUF3412 H5404_11590 IPR031100 LOG family H5404_11590 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily H5404_11595 IPR029787 Nucleotide cyclase H5404_11595 IPR000160 GGDEF domain H5404_11605 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal H5404_11605 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF H5404_11605 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 H5404_11610 IPR009948 Syd H5404_11610 IPR038228 Syd superfamily H5404_11615 IPR016908 Uncharacterised conserved protein UCP029037 H5404_11620 IPR004872 Lipoprotein NlpA family H5404_11625 IPR000515 ABC transporter type 1, transmembrane domain MetI-like H5404_11625 IPR035906 MetI-like superfamily H5404_11630 IPR003439 ABC transporter-like H5404_11630 IPR017871 ABC transporter, conserved site H5404_11630 IPR017908 ABC transporter, methionine import, ATP-binding protein, MetN, C-terminal H5404_11630 IPR041701 Methionine import ATP-binding protein MetN, ATP-binding cassette domain H5404_11630 IPR018449 NIL domain H5404_11630 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_11630 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria H5404_11630 IPR026253 Methionine import ATP-binding protein MetN H5404_11630 IPR003593 AAA+ ATPase domain H5404_11635 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase H5404_11635 IPR023214 HAD superfamily H5404_11635 IPR006549 HAD-superfamily hydrolase,subfamily IIIA H5404_11635 IPR036412 HAD-like superfamily H5404_11635 IPR006543 Histidinol-phosphate phosphatase H5404_11640 IPR028082 Periplasmic binding protein-like I H5404_11640 IPR000843 LacI-type HTH domain H5404_11640 IPR010982 Lambda repressor-like, DNA-binding domain superfamily H5404_11640 IPR012771 Trehalose operon repressor H5404_11645 IPR011296 Phosphotransferase system, trehalose-specific IIBC component H5404_11645 IPR001996 Phosphotransferase system, IIB component, type 1 H5404_11645 IPR013013 Phosphotransferase system, EIIC component, type 1 H5404_11645 IPR003352 Phosphotransferase system, EIIC H5404_11645 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site H5404_11645 IPR036878 Glucose permease domain IIB H5404_11645 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component H5404_11650 IPR013780 Glycosyl hydrolase, all-beta H5404_11650 IPR017853 Glycoside hydrolase superfamily H5404_11650 IPR012769 Trehalose-6-phosphate hydrolase H5404_11650 IPR032091 Maltogenic Amylase, C-terminal H5404_11650 IPR006047 Glycosyl hydrolase, family 13, catalytic domain H5404_11665 IPR003740 Uncharacterised membrane protein YitT H5404_11665 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal H5404_11665 IPR019264 Domain of unknown function DUF2179 H5404_11670 IPR015424 Pyridoxal phosphate-dependent transferase H5404_11670 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 H5404_11670 IPR015421 Pyridoxal phosphate-dependent transferase, major domain H5404_11670 IPR001085 Serine hydroxymethyltransferase H5404_11670 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site H5404_11670 IPR039429 Serine hydroxymethyltransferase-like domain H5404_11675 IPR006638 Elp3/MiaB/NifB H5404_11675 IPR013785 Aldolase-type TIM barrel H5404_11675 IPR003698 Lipoyl synthase H5404_11675 IPR031691 Lipoyl synthase, N-terminal H5404_11675 IPR007197 Radical SAM H5404_11680 IPR020605 Octanoyltransferase, conserved site H5404_11680 IPR000544 Octanoyltransferase H5404_11680 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain H5404_11685 IPR007454 Uncharacterised protein family UPF0250 H5404_11685 IPR027471 YbeD-like domain superfamily H5404_11690 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily H5404_11690 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal H5404_11690 IPR015956 Penicillin-binding protein, C-terminal domain superfamily H5404_11690 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A H5404_11690 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal H5404_11690 IPR012338 Beta-lactamase/transpeptidase-like H5404_11695 IPR009009 RlpA-like protein, double-psi beta-barrel domain H5404_11695 IPR036908 RlpA-like domain superfamily H5404_11695 IPR036680 Sporulation-like domain superfamily H5404_11695 IPR034718 Endolytic peptidoglycan transglycosylase RlpA H5404_11695 IPR012997 Rare lipoprotein A H5404_11695 IPR007730 Sporulation-like domain H5404_11700 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB H5404_11700 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA H5404_11700 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site H5404_11705 IPR005311 Penicillin-binding protein, dimerisation domain H5404_11705 IPR036138 Penicillin-binding protein, dimerisation domain superfamily H5404_11705 IPR001460 Penicillin-binding protein, transpeptidase H5404_11705 IPR017790 Penicillin-binding protein 2 H5404_11705 IPR012338 Beta-lactamase/transpeptidase-like H5404_11710 IPR003742 RNA methyltransferase RlmH H5404_11710 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal H5404_11710 IPR029028 Alpha/beta knot methyltransferases H5404_11715 IPR004394 Protein Iojap/ribosomal silencing factor RsfS H5404_11720 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal H5404_11720 IPR032780 DNA polymerase III subunit delta, C-terminal H5404_11720 IPR010372 DNA polymerase III delta, N-terminal H5404_11720 IPR005790 DNA polymerase III, delta subunit H5404_11720 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_11725 IPR007485 LPS-assembly lipoprotein LptE H5404_11730 IPR002300 Aminoacyl-tRNA synthetase, class Ia H5404_11730 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold H5404_11730 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding H5404_11730 IPR025709 Leucyl-tRNA synthetase, editing domain H5404_11730 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain H5404_11730 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding H5404_11730 IPR002302 Leucine-tRNA ligase H5404_11730 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site H5404_11735 IPR009912 Zinc-ribbon containing domain H5404_11740 IPR003010 Carbon-nitrogen hydrolase H5404_11740 IPR036526 Carbon-nitrogen hydrolase superfamily H5404_11740 IPR004563 Apolipoprotein N-acyltransferase H5404_11745 IPR000644 CBS domain H5404_11745 IPR036318 FAD-binding, type PCMH-like superfamily H5404_11745 IPR016169 FAD-binding, type PCMH, subdomain 2 H5404_11745 IPR005170 Transporter-associated domain H5404_11750 IPR002036 Endoribonuclease YbeY H5404_11750 IPR020549 Endoribonuclease YbeY, conserved site H5404_11750 IPR023091 Metalloprotease catalytic domain superfamily, predicted H5404_11755 IPR003714 PhoH-like protein H5404_11755 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_11760 IPR005839 Methylthiotransferase H5404_11760 IPR006638 Elp3/MiaB/NifB H5404_11760 IPR013848 Methylthiotransferase, N-terminal H5404_11760 IPR038135 Methylthiotransferase, N-terminal domain superfamily H5404_11760 IPR020612 Methylthiotransferase, conserved site H5404_11760 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB H5404_11760 IPR007197 Radical SAM H5404_11760 IPR023404 Radical SAM, alpha/beta horseshoe H5404_11760 IPR002792 TRAM domain H5404_11765 IPR036188 FAD/NAD(P)-binding domain superfamily H5404_11765 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site H5404_11765 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 H5404_11765 IPR002938 FAD-binding domain H5404_11880 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 H5404_11880 IPR041706 YchF, N-terminal H5404_11880 IPR012676 TGS-like H5404_11880 IPR004095 TGS H5404_11880 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_11880 IPR006073 GTP binding domain H5404_11880 IPR031167 OBG-type guanine nucleotide-binding (G) domain H5404_11880 IPR023192 TGS-like domain superfamily H5404_11880 IPR012675 Beta-grasp domain superfamily H5404_11880 IPR013029 YchF, C-terminal domain H5404_11885 IPR018171 Peptidyl-tRNA hydrolase, conserved site H5404_11885 IPR036416 Peptidyl-tRNA hydrolase superfamily H5404_11885 IPR001328 Peptidyl-tRNA hydrolase H5404_11890 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain H5404_11890 IPR029057 Phosphoribosyltransferase-like H5404_11890 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type H5404_11890 IPR005946 Ribose-phosphate pyrophosphokinase H5404_11890 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site H5404_11890 IPR000836 Phosphoribosyltransferase domain H5404_11895 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup H5404_11895 IPR006204 GHMP kinase N-terminal domain H5404_11895 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase H5404_11895 IPR036554 GHMP kinase, C-terminal domain superfamily H5404_11895 IPR013750 GHMP kinase, C-terminal domain H5404_11895 IPR020568 Ribosomal protein S5 domain 2-type fold H5404_11900 IPR004565 Outer membrane lipoprotein LolB H5404_11900 IPR029046 Lipoprotein localisation LolA/LolB/LppX H5404_11905 IPR036291 NAD(P)-binding domain superfamily H5404_11905 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily H5404_11905 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily H5404_11905 IPR018214 Glutamyl-tRNA reductase, conserved site H5404_11905 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal H5404_11905 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain H5404_11905 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase H5404_11905 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase H5404_11910 IPR000352 Peptide chain release factor class I H5404_11910 IPR004373 Peptide chain release factor 1 H5404_11910 IPR005139 Peptide chain release factor H5404_11915 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_11915 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific H5404_11915 IPR004556 Methyltransferase HemK-like H5404_11915 IPR025714 Methyltransferase domain H5404_11915 IPR040758 Release factor glutamine methyltransferase, N-terminal domain H5404_11915 IPR002052 DNA methylase, N-6 adenine-specific, conserved site H5404_11920 IPR007360 Invasion gene expression up-regulator, SirB H5404_11925 IPR011990 Tetratricopeptide-like helical domain superfamily H5404_11925 IPR032698 Protein SirB1, N-terminal H5404_11930 IPR006269 3-deoxy-8-phosphooctulonate synthase H5404_11930 IPR013785 Aldolase-type TIM barrel H5404_11930 IPR006218 DAHP synthetase I/KDSA H5404_11935 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type H5404_11935 IPR036907 5'-Nucleotidase, C-terminal domain superfamily H5404_11935 IPR006179 5'-Nucleotidase/apyrase H5404_11935 IPR006146 5'-Nucleotidase, conserved site H5404_11935 IPR008334 5'-Nucleotidase, C-terminal H5404_11935 IPR029052 Metallo-dependent phosphatase-like H5404_11940 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC H5404_11940 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain H5404_11940 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily H5404_11945 IPR036986 RNA-binding S4 domain superfamily H5404_11945 IPR002942 RNA-binding S4 domain H5404_11945 IPR020103 Pseudouridine synthase, catalytic domain superfamily H5404_11945 IPR006145 Pseudouridine synthase, RsuA/RluA H5404_11945 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site H5404_11945 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F H5404_11945 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain H5404_11950 IPR036063 Smr domain superfamily H5404_11950 IPR002625 Smr domain H5404_11970 IPR015883 Glycoside hydrolase family 20, catalytic domain H5404_11970 IPR017853 Glycoside hydrolase superfamily H5404_11970 IPR025705 Beta-hexosaminidase H5404_11970 IPR012291 CBM2, carbohydrate-binding domain superfamily H5404_11970 IPR014756 Immunoglobulin E-set H5404_11970 IPR013783 Immunoglobulin-like fold H5404_11970 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain H5404_11970 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal H5404_11970 IPR004867 Chitobiase C-terminal domain H5404_11970 IPR029018 Beta-hexosaminidase-like, domain 2 H5404_11970 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily H5404_11985 IPR036412 HAD-like superfamily H5404_11985 IPR023298 P-type ATPase, transmembrane domain superfamily H5404_11985 IPR023214 HAD superfamily H5404_11985 IPR006121 Heavy metal-associated domain, HMA H5404_11985 IPR018303 P-type ATPase, phosphorylation site H5404_11985 IPR023299 P-type ATPase, cytoplasmic domain N H5404_11985 IPR001757 P-type ATPase H5404_11985 IPR027256 P-type ATPase, subfamily IB H5404_11985 IPR008250 P-type ATPase, A domain superfamily H5404_11985 IPR017969 Heavy-metal-associated, conserved site H5404_11985 IPR036163 Heavy metal-associated domain superfamily H5404_11990 IPR023614 Porin domain superfamily H5404_11990 IPR002299 Porin, Neisseria sp. type H5404_11990 IPR001702 Porin, Gram-negative type H5404_11990 IPR033900 Porin domain, Gram-negative type H5404_11995 IPR018635 Uncharacterised protein family UPF0319 H5404_12000 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold H5404_12000 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain H5404_12000 IPR000924 Glutamyl/glutaminyl-tRNA synthetase H5404_12000 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial H5404_12000 IPR033910 Glutamyl-tRNA synthetase H5404_12000 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site H5404_12000 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 H5404_12000 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding H5404_12005 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel H5404_12005 IPR000498 Outer membrane protein OmpA-like, transmembrane domain H5404_12005 IPR036737 OmpA-like domain superfamily H5404_12005 IPR002368 Outer membrane protein, OmpA H5404_12005 IPR006664 Outer membrane protein, bacterial H5404_12005 IPR006690 Outer membrane protein, OmpA-like, conserved site H5404_12005 IPR006665 OmpA-like domain H5404_12050 IPR011006 CheY-like superfamily H5404_12050 IPR024181 Chemotaxis response regulator CheV H5404_12050 IPR036061 CheW-like domain superfamily H5404_12050 IPR002545 CheW-like domain H5404_12050 IPR001789 Signal transduction response regulator, receiver domain H5404_12055 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal H5404_12055 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal H5404_12055 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily H5404_12055 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_12055 IPR000780 MCP methyltransferase, CheR-type H5404_12060 IPR006300 Flagellar basal-body rod protein FlgB H5404_12060 IPR019776 Flagellar basal body rod protein, conserved site H5404_12060 IPR001444 Flagellar basal body rod protein, N-terminal H5404_12065 IPR001444 Flagellar basal body rod protein, N-terminal H5404_12065 IPR006299 Flagellar basal-body rod protein FlgC H5404_12065 IPR019776 Flagellar basal body rod protein, conserved site H5404_12065 IPR010930 Flagellar basal-body/hook protein, C-terminal domain H5404_12070 IPR025965 FlgD Ig-like domain H5404_12070 IPR005648 Flagellar hook capping protein H5404_12070 IPR025963 FlgD Tudor-like domain H5404_12075 IPR011491 Flagellar hook protein FlgE H5404_12075 IPR037058 Flagellar hook protein FlgE superfamily H5404_12075 IPR001444 Flagellar basal body rod protein, N-terminal H5404_12075 IPR019776 Flagellar basal body rod protein, conserved site H5404_12075 IPR010930 Flagellar basal-body/hook protein, C-terminal domain H5404_12075 IPR020013 Flagellar hook-basal body protein, FlgE/F/G H5404_12075 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like H5404_12080 IPR010930 Flagellar basal-body/hook protein, C-terminal domain H5404_12080 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like H5404_12080 IPR020013 Flagellar hook-basal body protein, FlgE/F/G H5404_12080 IPR019776 Flagellar basal body rod protein, conserved site H5404_12080 IPR001444 Flagellar basal body rod protein, N-terminal H5404_12085 IPR020013 Flagellar hook-basal body protein, FlgE/F/G H5404_12085 IPR010930 Flagellar basal-body/hook protein, C-terminal domain H5404_12085 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like H5404_12085 IPR001444 Flagellar basal body rod protein, N-terminal H5404_12085 IPR012834 Flagellar basal-body rod FlgG H5404_12085 IPR019776 Flagellar basal body rod protein, conserved site H5404_12090 IPR000527 Flagellar L-ring protein H5404_12095 IPR001782 Flagellar P-ring protein H5404_12100 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain H5404_12100 IPR019301 Flagellar protein FlgJ, N-terminal H5404_12100 IPR013377 Peptidoglycan hydrolase FlgJ H5404_12105 IPR010930 Flagellar basal-body/hook protein, C-terminal domain H5404_12105 IPR002371 Flagellar hook-associated protein 1 H5404_12105 IPR010810 Flagellin hook, IN motif H5404_12110 IPR013384 Flagellar hook-associated protein 3 H5404_12110 IPR001029 Flagellin, D0/D1 domain H5404_12115 IPR010810 Flagellin hook, IN motif H5404_12115 IPR001029 Flagellin, D0/D1 domain H5404_12115 IPR042187 Flagellin, C-terminal domain, subdomain 2 H5404_12115 IPR001492 Flagellin H5404_12120 IPR001029 Flagellin, D0/D1 domain H5404_12120 IPR042187 Flagellin, C-terminal domain, subdomain 2 H5404_12120 IPR010810 Flagellin hook, IN motif H5404_12120 IPR001492 Flagellin H5404_12125 IPR001492 Flagellin H5404_12125 IPR001029 Flagellin, D0/D1 domain H5404_12125 IPR010810 Flagellin hook, IN motif H5404_12130 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 H5404_12130 IPR011055 Duplicated hybrid motif H5404_12135 IPR040442 Pyruvate kinase-like domain superfamily H5404_12135 IPR006318 Phosphotransferase system, enzyme I-like H5404_12135 IPR018274 PEP-utilising enzyme, active site H5404_12135 IPR000121 PEP-utilising enzyme, C-terminal H5404_12135 IPR023151 PEP-utilising enzyme, conserved site H5404_12135 IPR036618 PtsI, HPr-binding domain superfamily H5404_12135 IPR008731 Phosphotransferase system, enzyme I N-terminal H5404_12135 IPR024692 Phosphotransferase system, enzyme I H5404_12135 IPR036637 Phosphohistidine domain superfamily H5404_12135 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily H5404_12135 IPR008279 PEP-utilising enzyme, mobile domain H5404_12140 IPR000032 Phosphocarrier protein HPr-like H5404_12140 IPR035895 HPr-like superfamily H5404_12140 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site H5404_12140 IPR002114 Phosphotransferase system, HPr serine phosphorylation site H5404_12145 IPR001926 Pyridoxal-phosphate dependent enzyme H5404_12145 IPR005856 Cysteine synthase H5404_12145 IPR005859 Cysteine synthase CysK H5404_12145 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site H5404_12145 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme H5404_12150 IPR022985 Sulfate transporter CysZ H5404_12155 IPR011919 Cell division protein ZipA H5404_12155 IPR007449 ZipA, C-terminal FtsZ-binding domain H5404_12155 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily H5404_12160 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type H5404_12160 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 H5404_12160 IPR018239 NAD-dependent DNA ligase, active site H5404_12160 IPR012340 Nucleic acid-binding, OB-fold H5404_12160 IPR004150 NAD-dependent DNA ligase, OB-fold H5404_12160 IPR010994 RuvA domain 2-like H5404_12160 IPR041663 DisA/LigA, helix-hairpin-helix motif H5404_12160 IPR001679 NAD-dependent DNA ligase H5404_12160 IPR033136 NAD-dependent DNA ligase, conserved site H5404_12160 IPR036420 BRCT domain superfamily H5404_12160 IPR001357 BRCT domain H5404_12160 IPR013839 NAD-dependent DNA ligase, adenylation H5404_12160 IPR013840 NAD-dependent DNA ligase, N-terminal H5404_12165 IPR005318 Outer membrane porin, bacterial H5404_12165 IPR023614 Porin domain superfamily H5404_12180 IPR001972 Stomatin family H5404_12180 IPR036013 Band 7/SPFH domain superfamily H5404_12180 IPR001107 Band 7 domain H5404_12180 IPR018080 Band 7/stomatin-like, conserved site H5404_12180 IPR032435 Band 7, C-terminal extension H5404_12185 IPR011990 Tetratricopeptide-like helical domain superfamily H5404_12185 IPR013766 Thioredoxin domain H5404_12185 IPR036249 Thioredoxin-like superfamily H5404_12190 IPR002347 Short-chain dehydrogenase/reductase SDR H5404_12190 IPR020904 Short-chain dehydrogenase/reductase, conserved site H5404_12190 IPR036291 NAD(P)-binding domain superfamily H5404_12195 IPR013549 Domain of unknown function DUF1731 H5404_12195 IPR010099 Epimerase family protein SDR39U1 H5404_12195 IPR036291 NAD(P)-binding domain superfamily H5404_12195 IPR001509 NAD-dependent epimerase/dehydratase H5404_12200 IPR011435 Na(+), Li(+), K(+)/H(+) antiporter subunit A/B H5404_12205 IPR011435 Na(+), Li(+), K(+)/H(+) antiporter subunit A/B H5404_12220 IPR029052 Metallo-dependent phosphatase-like H5404_12220 IPR041802 YfcE-like, metallophosphatase domain H5404_12220 IPR020935 Phosphodiesterase YfcE, conserved site H5404_12220 IPR000979 Phosphodiesterase MJ0936/Vps29 H5404_12220 IPR024654 Calcineurin-like phosphoesterase domain, lpxH-type H5404_12235 IPR035288 Trans-membrane regulatory protein ToxS H5404_12240 IPR039420 Transcriptional regulatory protein WalR-like H5404_12240 IPR016032 Signal transduction response regulator, C-terminal effector H5404_12240 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_12240 IPR001867 OmpR/PhoB-type DNA-binding domain H5404_12245 IPR019805 Heat shock protein Hsp90, conserved site H5404_12245 IPR037196 HSP90, C-terminal domain H5404_12245 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_12245 IPR020575 Heat shock protein Hsp90, N-terminal H5404_12245 IPR003594 Histidine kinase/HSP90-like ATPase H5404_12245 IPR001404 Heat shock protein Hsp90 family H5404_12245 IPR020568 Ribosomal protein S5 domain 2-type fold H5404_12250 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_12250 IPR000850 Adenylate kinase/UMP-CMP kinase H5404_12250 IPR007862 Adenylate kinase, active site lid domain H5404_12250 IPR006259 Adenylate kinase subfamily H5404_12250 IPR033690 Adenylate kinase, conserved site H5404_12255 IPR033659 Ferrochelatase, N-terminal H5404_12255 IPR033644 Ferrochelatase, C-terminal H5404_12255 IPR019772 Ferrochelatase, active site H5404_12255 IPR001015 Ferrochelatase H5404_12260 IPR020846 Major facilitator superfamily domain H5404_12260 IPR005279 Dipeptide/tripeptide permease H5404_12260 IPR036259 MFS transporter superfamily H5404_12260 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site H5404_12260 IPR000109 Proton-dependent oligopeptide transporter family H5404_12265 IPR006645 NusG, N-terminal H5404_12265 IPR036735 NusG, N-terminal domain superfamily H5404_12265 IPR010215 Transcription antitermination protein RfaH H5404_12270 IPR001962 Asparagine synthase H5404_12270 IPR006426 Asparagine synthase, glutamine-hydrolyzing H5404_12270 IPR029055 Nucleophile aminohydrolases, N-terminal H5404_12270 IPR017932 Glutamine amidotransferase type 2 domain H5404_12270 IPR033738 Asparagine synthase, N-terminal domain H5404_12270 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold H5404_12275 IPR006153 Cation/H+ exchanger H5404_12275 IPR004771 K+/H+ exchanger H5404_12275 IPR038770 Sodium/solute symporter superfamily H5404_12275 IPR036291 NAD(P)-binding domain superfamily H5404_12275 IPR003148 Regulator of K+ conductance, N-terminal H5404_12280 IPR036390 Winged helix DNA-binding domain superfamily H5404_12280 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_12280 IPR000600 ROK family H5404_12280 IPR000835 MarR-type HTH domain H5404_12285 IPR006680 Amidohydrolase-related H5404_12285 IPR003764 N-acetylglucosamine-6-phosphate deacetylase H5404_12285 IPR032466 Metal-dependent hydrolase H5404_12285 IPR011059 Metal-dependent hydrolase, composite domain superfamily H5404_12290 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site H5404_12290 IPR013013 Phosphotransferase system, EIIC component, type 1 H5404_12290 IPR036878 Glucose permease domain IIB H5404_12290 IPR003352 Phosphotransferase system, EIIC H5404_12290 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component H5404_12290 IPR001996 Phosphotransferase system, IIB component, type 1 H5404_12295 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily H5404_12295 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site H5404_12295 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal H5404_12295 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily H5404_12295 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain H5404_12295 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain H5404_12295 IPR000924 Glutamyl/glutaminyl-tRNA synthetase H5404_12295 IPR022861 Glutamine-tRNA ligase, bacterial H5404_12295 IPR004514 Glutamine-tRNA synthetase H5404_12295 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold H5404_12300 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_12300 IPR002481 Ferric-uptake regulator H5404_12300 IPR036390 Winged helix DNA-binding domain superfamily H5404_12310 IPR001226 Flavodoxin, conserved site H5404_12310 IPR008254 Flavodoxin/nitric oxide synthase H5404_12310 IPR010086 Flavodoxin, long chain H5404_12310 IPR029039 Flavoprotein-like superfamily H5404_12320 IPR029058 Alpha/Beta hydrolase fold H5404_12320 IPR000073 Alpha/beta hydrolase fold-1 H5404_12325 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal H5404_12325 IPR013321 Arc-type ribbon-helix-helix H5404_12325 IPR010985 Ribbon-helix-helix H5404_12325 IPR005621 Negative modulator of initiation of replication SeqA H5404_12325 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain H5404_12325 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily H5404_12330 IPR016066 Alpha-D-phosphohexomutase, conserved site H5404_12330 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III H5404_12330 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III H5404_12330 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I H5404_12330 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily H5404_12330 IPR005843 Alpha-D-phosphohexomutase, C-terminal H5404_12330 IPR005852 Phosphoglucomutase, alpha-D-glucose specific H5404_12330 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II H5404_12340 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily H5404_12340 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 H5404_12345 IPR002020 Citrate synthase H5404_12345 IPR019810 Citrate synthase active site H5404_12345 IPR036969 Citrate synthase superfamily H5404_12345 IPR010953 Citrate synthase, type I H5404_12345 IPR024176 Citrate synthase, bacterial-type H5404_12345 IPR016143 Citrate synthase-like, small alpha subdomain H5404_12345 IPR016142 Citrate synthase-like, large alpha subdomain H5404_12350 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit H5404_12350 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site H5404_12350 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit H5404_12350 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit H5404_12355 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit H5404_12355 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit H5404_12355 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor H5404_12360 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily H5404_12360 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal H5404_12360 IPR011281 Succinate dehydrogenase, flavoprotein subunit H5404_12360 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain H5404_12360 IPR036188 FAD/NAD(P)-binding domain superfamily H5404_12360 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit H5404_12360 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily H5404_12360 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site H5404_12365 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site H5404_12365 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein H5404_12365 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain H5404_12365 IPR036010 2Fe-2S ferredoxin-like superfamily H5404_12365 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal H5404_12365 IPR009051 Alpha-helical ferredoxin H5404_12365 IPR012675 Beta-grasp domain superfamily H5404_12365 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain H5404_12370 IPR011603 2-oxoglutarate dehydrogenase E1 component H5404_12370 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain H5404_12370 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal H5404_12370 IPR042179 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal domain superfamily H5404_12370 IPR029061 Thiamin diphosphate-binding fold H5404_12370 IPR005475 Transketolase-like, pyrimidine-binding domain H5404_12370 IPR001017 Dehydrogenase, E1 component H5404_12375 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily H5404_12375 IPR004167 Peripheral subunit-binding domain H5404_12375 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site H5404_12375 IPR036625 E3-binding domain superfamily H5404_12375 IPR006255 Dihydrolipoamide succinyltransferase H5404_12375 IPR000089 Biotin/lipoyl attachment H5404_12375 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain H5404_12375 IPR011053 Single hybrid motif H5404_12380 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site H5404_12380 IPR005809 Succinate--CoA synthetase, beta subunit H5404_12380 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type H5404_12380 IPR013815 ATP-grasp fold, subdomain 1 H5404_12380 IPR016102 Succinyl-CoA synthetase-like H5404_12380 IPR011761 ATP-grasp fold H5404_12380 IPR005811 ATP-citrate lyase/succinyl-CoA ligase H5404_12385 IPR036291 NAD(P)-binding domain superfamily H5404_12385 IPR005811 ATP-citrate lyase/succinyl-CoA ligase H5404_12385 IPR016102 Succinyl-CoA synthetase-like H5404_12385 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site H5404_12385 IPR003781 CoA-binding H5404_12385 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site H5404_12385 IPR005810 Succinyl-CoA ligase, alpha subunit H5404_12390 IPR037294 ABC transporter, BtuC-like H5404_12390 IPR001626 ABC transporter, TroCD-like H5404_12395 IPR003439 ABC transporter-like H5404_12395 IPR003593 AAA+ ATPase domain H5404_12395 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_12395 IPR017882 Zinc import ATP-binding protein ZnuC H5404_12400 IPR035520 High-affinity zinc uptake system protein ZnuA H5404_12400 IPR006127 Periplasmic solute binding protein, ZnuA-like H5404_12400 IPR006128 Adhesion lipoprotein H5404_12405 IPR011051 RmlC-like cupin domain superfamily H5404_12405 IPR014710 RmlC-like jelly roll fold H5404_12405 IPR018060 DNA binding HTH domain, AraC-type H5404_12405 IPR009057 Homeobox-like domain superfamily H5404_12405 IPR023609 Transcription regulator HTH, RhaS H5404_12405 IPR020449 Transcription regulator HTH, AraC- type H5404_12405 IPR003313 AraC-type arabinose-binding/dimerisation domain H5404_12410 IPR007167 Ferrous iron transporter FeoA domain H5404_12410 IPR038157 Ferrous iron transporter, core domain H5404_12410 IPR008988 Transcriptional repressor, C-terminal H5404_12415 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_12415 IPR005225 Small GTP-binding protein domain H5404_12415 IPR030389 FeoB-type guanine nucleotide-binding (G) domain H5404_12415 IPR003373 Ferrous iron transport protein B H5404_12415 IPR011640 Ferrous iron transport protein B, C-terminal H5404_12415 IPR041069 FeoB, cytosolic helical domain H5404_12415 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain H5404_12430 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding H5404_12430 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site H5404_12430 IPR001278 Arginine-tRNA ligase H5404_12430 IPR005148 Arginyl tRNA synthetase N-terminal domain H5404_12430 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily H5404_12430 IPR035684 Arginyl-tRNA synthetase, catalytic core domain H5404_12430 IPR008909 DALR anticodon binding H5404_12430 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold H5404_12435 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase H5404_12435 IPR010393 Protein of unknown function DUF991 H5404_12440 IPR004810 Formyltetrahydrofolate deformylase H5404_12440 IPR036477 Formyl transferase, N-terminal domain superfamily H5404_12440 IPR041729 Formyltetrahydrofolate deformylase, C-terminal hydrolase domain H5404_12440 IPR002912 ACT domain H5404_12440 IPR002376 Formyl transferase, N-terminal H5404_12445 IPR006555 ATP-dependent helicase, C-terminal H5404_12445 IPR006935 Helicase/UvrB, N-terminal H5404_12445 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_12445 IPR014001 Helicase superfamily 1/2, ATP-binding domain H5404_12445 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type H5404_12450 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB H5404_12450 IPR000905 Gcp-like domain H5404_12465 IPR000073 Alpha/beta hydrolase fold-1 H5404_12465 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase H5404_12465 IPR029058 Alpha/Beta hydrolase fold H5404_12470 IPR000873 AMP-dependent synthetase/ligase H5404_12470 IPR020845 AMP-binding, conserved site H5404_12470 IPR042099 AMP-dependent synthetase-like superfamily H5404_12470 IPR025110 AMP-binding enzyme, C-terminal domain H5404_12475 IPR010997 HRDC-like superfamily H5404_12475 IPR036397 Ribonuclease H superfamily H5404_12475 IPR002121 HRDC domain H5404_12475 IPR012337 Ribonuclease H-like superfamily H5404_12475 IPR002562 3'-5' exonuclease domain H5404_12475 IPR006292 Ribonuclease D H5404_12480 IPR005527 Cell division topological specificity factor MinE H5404_12480 IPR036707 Cell division topological specificity factor MinE superfamily H5404_12485 IPR010223 ATP binding protein MinD, bacterial-type H5404_12485 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_12485 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain H5404_12485 IPR025501 ATP binding protein MinD H5404_12490 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily H5404_12490 IPR005526 Septum formation inhibitor MinC, C-terminal H5404_12490 IPR013033 Septum formation inhibitor MinC H5404_12490 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal H5404_12490 IPR007874 Septum formation inhibitor MinC, N-terminal H5404_12490 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily H5404_12495 IPR027354 YcgL domain H5404_12495 IPR038068 YcgL-like superfamily H5404_12500 IPR023346 Lysozyme-like domain superfamily H5404_12500 IPR011757 Lytic transglycosylase MltB H5404_12500 IPR031304 Transglycosylase SLT domain 2 H5404_12505 IPR000847 Transcription regulator HTH, LysR H5404_12505 IPR005119 LysR, substrate-binding H5404_12505 IPR036390 Winged helix DNA-binding domain superfamily H5404_12505 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_12510 IPR008276 Concentrative nucleoside transporter H5404_12510 IPR011657 Concentrative nucleoside transporter C-terminal domain H5404_12510 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial H5404_12510 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain H5404_12510 IPR002668 Concentrative nucleoside transporter N-terminal domain H5404_12515 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain H5404_12515 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain H5404_12515 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase H5404_12515 IPR036291 NAD(P)-binding domain superfamily H5404_12515 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site H5404_12530 IPR016039 Thiolase-like H5404_12530 IPR014030 Beta-ketoacyl synthase, N-terminal H5404_12530 IPR014031 Beta-ketoacyl synthase, C-terminal H5404_12530 IPR018201 Beta-ketoacyl synthase, active site H5404_12530 IPR000794 Beta-ketoacyl synthase H5404_12530 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 H5404_12530 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain H5404_12535 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative H5404_12535 IPR036291 NAD(P)-binding domain superfamily H5404_12535 IPR002347 Short-chain dehydrogenase/reductase SDR H5404_12540 IPR029069 HotDog domain superfamily H5404_12540 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ H5404_12540 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ H5404_12545 IPR000794 Beta-ketoacyl synthase H5404_12545 IPR018201 Beta-ketoacyl synthase, active site H5404_12545 IPR014031 Beta-ketoacyl synthase, C-terminal H5404_12545 IPR014030 Beta-ketoacyl synthase, N-terminal H5404_12545 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 H5404_12545 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain H5404_12545 IPR016039 Thiolase-like H5404_12570 IPR024083 Fumarase/histidase, N-terminal H5404_12570 IPR022313 Phenylalanine/histidine ammonia-lyases, active site H5404_12570 IPR008948 L-Aspartase-like H5404_12570 IPR001106 Aromatic amino acid lyase H5404_12570 IPR005921 Histidine ammonia-lyase H5404_12575 IPR001173 Glycosyltransferase 2-like H5404_12575 IPR039528 DPM1-like H5404_12575 IPR029044 Nucleotide-diphospho-sugar transferases H5404_12580 IPR029069 HotDog domain superfamily H5404_12580 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ H5404_12580 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ H5404_12595 IPR009081 Phosphopantetheine binding ACP domain H5404_12595 IPR036736 ACP-like superfamily H5404_12595 IPR003231 Acyl carrier protein (ACP) H5404_12600 IPR009081 Phosphopantetheine binding ACP domain H5404_12600 IPR003231 Acyl carrier protein (ACP) H5404_12600 IPR036736 ACP-like superfamily H5404_12600 IPR006162 Phosphopantetheine attachment site H5404_12625 IPR006905 Flavin-dependent halogenase H5404_12625 IPR036188 FAD/NAD(P)-binding domain superfamily H5404_12635 IPR002550 CNNM, transmembrane domain H5404_12635 IPR036318 FAD-binding, type PCMH-like superfamily H5404_12635 IPR016169 FAD-binding, type PCMH, subdomain 2 H5404_12635 IPR005170 Transporter-associated domain H5404_12635 IPR000644 CBS domain H5404_12640 IPR011545 DEAD/DEAH box helicase domain H5404_12640 IPR014014 RNA helicase, DEAD-box type, Q motif H5404_12640 IPR014001 Helicase superfamily 1/2, ATP-binding domain H5404_12640 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_12640 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site H5404_12640 IPR028622 ATP-dependent RNA helicase RhlE H5404_12640 IPR001650 Helicase, C-terminal H5404_12645 IPR003148 Regulator of K+ conductance, N-terminal H5404_12645 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily H5404_12645 IPR006037 Regulator of K+ conductance, C-terminal H5404_12645 IPR036291 NAD(P)-binding domain superfamily H5404_12650 IPR003445 Cation transporter H5404_12650 IPR004772 TrkH potassium transport family H5404_12665 IPR003846 Protein adenylyltransferase SelO H5404_12670 IPR018389 TRAP transporter solute receptor DctP/TeaA H5404_12670 IPR038404 TRAP transporter solute receptor DctP superfamily H5404_12670 IPR004682 TRAP transporter solute receptor, DctP family H5404_12675 IPR007387 TRAP transporter, small membrane protein DctQ H5404_12680 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit H5404_12680 IPR004681 TRAP transporter large membrane protein DctM H5404_12690 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 H5404_12690 IPR001789 Signal transduction response regulator, receiver domain H5404_12690 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 H5404_12690 IPR011006 CheY-like superfamily H5404_12690 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_12690 IPR002078 RNA polymerase sigma factor 54 interaction domain H5404_12690 IPR002197 DNA binding HTH domain, Fis-type H5404_12690 IPR025944 Sigma-54 interaction domain, conserved site H5404_12690 IPR003593 AAA+ ATPase domain H5404_12690 IPR009057 Homeobox-like domain superfamily H5404_12695 IPR005467 Histidine kinase domain H5404_12695 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain H5404_12695 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily H5404_12695 IPR004358 Signal transduction histidine kinase-related protein, C-terminal H5404_12695 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_12695 IPR003594 Histidine kinase/HSP90-like ATPase H5404_12695 IPR029151 Periplasmic sensor-like domain superfamily H5404_12695 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) H5404_12695 IPR033479 Double Cache domain 1 H5404_12705 IPR005215 Trigger factor H5404_12705 IPR008880 Trigger factor, C-terminal H5404_12705 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain H5404_12705 IPR008881 Trigger factor, ribosome-binding, bacterial H5404_12705 IPR037041 Trigger factor, C-terminal domain superfamily H5404_12705 IPR027304 Trigger factor/SurA domain superfamily H5404_12705 IPR036611 Trigger factor ribosome-binding domain superfamily H5404_12710 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA H5404_12710 IPR001907 ATP-dependent Clp protease proteolytic subunit H5404_12710 IPR033135 ClpP, histidine active site H5404_12710 IPR029045 ClpP/crotonase-like domain superfamily H5404_12710 IPR018215 ClpP, Ser active site H5404_12715 IPR004487 Clp protease, ATP-binding subunit ClpX H5404_12715 IPR038366 Zinc finger, ClpX C4-type superfamily H5404_12715 IPR003593 AAA+ ATPase domain H5404_12715 IPR003959 ATPase, AAA-type, core H5404_12715 IPR010603 Zinc finger, ClpX C4-type H5404_12715 IPR019489 Clp ATPase, C-terminal H5404_12715 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_12720 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup H5404_12720 IPR003593 AAA+ ATPase domain H5404_12720 IPR003959 ATPase, AAA-type, core H5404_12720 IPR027543 Lon protease, bacterial H5404_12720 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_12720 IPR003111 Lon, substrate-binding domain H5404_12720 IPR020568 Ribosomal protein S5 domain 2-type fold H5404_12720 IPR015947 PUA-like superfamily H5404_12720 IPR004815 Lon protease, bacterial/eukaryotic-type H5404_12720 IPR008269 Peptidase S16, Lon proteolytic domain H5404_12720 IPR027065 Lon protease H5404_12725 IPR020816 Histone-like DNA-binding protein, conserved site H5404_12725 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily H5404_12725 IPR000119 Histone-like DNA-binding protein H5404_12730 IPR027304 Trigger factor/SurA domain superfamily H5404_12730 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site H5404_12730 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type H5404_12750 IPR003607 HD/PDEase domain H5404_12750 IPR006674 HD domain H5404_12750 IPR023023 dNTP triphosphohydrolase, type 2 H5404_12750 IPR006261 dNTP triphosphohydrolase H5404_12750 IPR026875 Phosphohydrolase-associated domain H5404_12755 IPR039356 Metal-dependent nucleoside 5'-monophosphatase H5404_12755 IPR022971 5'-deoxynucleotidase YfbR H5404_12755 IPR003607 HD/PDEase domain H5404_12760 IPR015421 Pyridoxal phosphate-dependent transferase, major domain H5404_12760 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 H5404_12760 IPR015424 Pyridoxal phosphate-dependent transferase H5404_12760 IPR004839 Aminotransferase, class I/classII H5404_12765 IPR005801 ADC synthase H5404_12765 IPR015890 Chorismate-utilising enzyme, C-terminal H5404_12765 IPR004561 Isochorismate synthase H5404_12765 IPR034681 Isochorismate synthase MenF H5404_12770 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain H5404_12770 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase H5404_12770 IPR032264 Menaquinone biosynthesis protein MenD, middle domain H5404_12770 IPR029061 Thiamin diphosphate-binding fold H5404_12770 IPR029035 DHS-like NAD/FAD-binding domain superfamily H5404_12770 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding H5404_12775 IPR000073 Alpha/beta hydrolase fold-1 H5404_12775 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase H5404_12775 IPR029058 Alpha/Beta hydrolase fold H5404_12780 IPR001753 Enoyl-CoA hydratase/isomerase H5404_12780 IPR029045 ClpP/crotonase-like domain superfamily H5404_12780 IPR014748 Enoyl-CoA hydratase, C-terminal H5404_12780 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB H5404_12780 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site H5404_12785 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal H5404_12785 IPR010196 o-Succinylbenzoate synthase, MenC type1 H5404_12785 IPR036849 Enolase-like, C-terminal domain superfamily H5404_12785 IPR029017 Enolase-like, N-terminal H5404_12785 IPR029065 Enolase C-terminal domain-like H5404_12790 IPR020845 AMP-binding, conserved site H5404_12790 IPR025110 AMP-binding enzyme, C-terminal domain H5404_12790 IPR010192 2-succinylbenzoate--CoA ligase H5404_12790 IPR042099 AMP-dependent synthetase-like superfamily H5404_12790 IPR000873 AMP-dependent synthetase/ligase H5404_12800 IPR018383 Uncharacterised protein family UPF0324, prokaryote H5404_12805 IPR023727 Lysophospholipid transporter LplT H5404_12805 IPR011701 Major facilitator superfamily H5404_12805 IPR036259 MFS transporter superfamily H5404_12850 IPR039562 Membrane fusion protein, biotin-lipoyl like domain H5404_12850 IPR006143 RND efflux pump, membrane fusion protein H5404_12850 IPR022824 Multidrug resistance protein MdtA H5404_12855 IPR001036 Acriflavin resistance protein H5404_12855 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains H5404_12875 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme H5404_12875 IPR023927 2,3-diaminopropionate biosynthesis protein SbnA H5404_12875 IPR001926 Pyridoxal-phosphate dependent enzyme H5404_12875 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site H5404_12880 IPR019888 Transcription regulator AsnC-type H5404_12880 IPR011991 ArsR-like helix-turn-helix domain H5404_12880 IPR000485 AsnC-type HTH domain H5404_12880 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain H5404_12880 IPR011008 Dimeric alpha-beta barrel H5404_12880 IPR019885 Transcription regulator HTH, AsnC-type, conserved site H5404_12880 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_12880 IPR036390 Winged helix DNA-binding domain superfamily H5404_12890 IPR029069 HotDog domain superfamily H5404_12890 IPR003703 Acyl-CoA thioesterase H5404_12895 IPR039366 YscW/ExsB H5404_12900 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding H5404_12900 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain H5404_12900 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_12910 IPR000160 GGDEF domain H5404_12910 IPR003660 HAMP domain H5404_12910 IPR029787 Nucleotide cyclase H5404_12910 IPR033417 Periplasmic sensor domain CHASE8 H5404_12920 IPR013123 RNA 2-O ribose methyltransferase, substrate binding H5404_12920 IPR001537 tRNA/rRNA methyltransferase, SpoU type H5404_12920 IPR029064 50S ribosomal protein L30e-like H5404_12920 IPR029028 Alpha/beta knot methyltransferases H5404_12920 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal H5404_12925 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site H5404_12925 IPR022569 Ferredoxin, C-terminal H5404_12925 IPR000813 7Fe ferredoxin H5404_12925 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain H5404_12930 IPR028348 FAD dependent protein H5404_12930 IPR036188 FAD/NAD(P)-binding domain superfamily H5404_12935 IPR013785 Aldolase-type TIM barrel H5404_12935 IPR015875 IMP dehydrogenase / GMP reductase, conserved site H5404_12935 IPR005990 Inosine-5'-monophosphate dehydrogenase H5404_12935 IPR000644 CBS domain H5404_12935 IPR001093 IMP dehydrogenase/GMP reductase H5404_12940 IPR017969 Heavy-metal-associated, conserved site H5404_12940 IPR036412 HAD-like superfamily H5404_12940 IPR006121 Heavy metal-associated domain, HMA H5404_12940 IPR023299 P-type ATPase, cytoplasmic domain N H5404_12940 IPR036163 Heavy metal-associated domain superfamily H5404_12940 IPR027256 P-type ATPase, subfamily IB H5404_12940 IPR008250 P-type ATPase, A domain superfamily H5404_12940 IPR023214 HAD superfamily H5404_12940 IPR023298 P-type ATPase, transmembrane domain superfamily H5404_12940 IPR001757 P-type ATPase H5404_12940 IPR018303 P-type ATPase, phosphorylation site H5404_12945 IPR000845 Nucleoside phosphorylase domain H5404_12945 IPR035994 Nucleoside phosphorylase superfamily H5404_12945 IPR018016 Nucleoside phosphorylase, conserved site H5404_12945 IPR010058 Uridine phosphorylase H5404_12955 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain H5404_12955 IPR003660 HAMP domain H5404_12955 IPR004090 Chemotaxis methyl-accepting receptor H5404_12960 IPR011146 HIT-like domain H5404_12960 IPR019808 Histidine triad, conserved site H5404_12960 IPR001310 Histidine triad (HIT) protein H5404_12960 IPR036265 HIT-like superfamily H5404_12975 IPR014094 Penicillin-binding protein activator LpoB H5404_12975 IPR012640 Membrane lipoprotein, lipid attachment site H5404_12985 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA H5404_12985 IPR022987 Uncharacterised protein family UPF0227 H5404_12985 IPR029058 Alpha/Beta hydrolase fold H5404_12990 IPR023753 FAD/NAD(P)-binding domain H5404_12990 IPR036188 FAD/NAD(P)-binding domain superfamily H5404_13005 IPR005118 Transcription-repair-coupling factor, C-terminal domain H5404_13005 IPR036101 CarD-like/TRCF domain superfamily H5404_13005 IPR041471 UvrB, interaction domain H5404_13005 IPR011545 DEAD/DEAH box helicase domain H5404_13005 IPR003711 CarD-like/TRCF domain H5404_13005 IPR037235 TRCF-like, C-terminal domain H5404_13005 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_13005 IPR004576 Transcription-repair coupling factor H5404_13005 IPR001650 Helicase, C-terminal H5404_13005 IPR014001 Helicase superfamily 1/2, ATP-binding domain H5404_13015 IPR003838 ABC transporter permease protein domain H5404_13015 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E H5404_13015 IPR025857 MacB-like periplasmic core domain H5404_13020 IPR011924 Lipoprotein releasing system, ATP-binding protein H5404_13020 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_13020 IPR015854 ABC transporter, lipoprotein release, LolD H5404_13020 IPR017871 ABC transporter, conserved site H5404_13020 IPR003439 ABC transporter-like H5404_13020 IPR003593 AAA+ ATPase domain H5404_13025 IPR025857 MacB-like periplasmic core domain H5404_13025 IPR011926 Lipoprotein-releasing system transmembrane protein LolE, gammaproteobacteria type H5404_13025 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E H5404_13025 IPR003838 ABC transporter permease protein domain H5404_13035 IPR004477 ComEC/Rec2-related protein H5404_13035 IPR035681 ComA-like, MBL domain H5404_13035 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like H5404_13035 IPR004797 Competence protein ComEC/Rec2 H5404_13035 IPR001279 Metallo-beta-lactamase H5404_13035 IPR025405 Domain of unknown function DUF4131 H5404_13040 IPR011527 ABC transporter type 1, transmembrane domain H5404_13040 IPR003593 AAA+ ATPase domain H5404_13040 IPR036640 ABC transporter type 1, transmembrane domain superfamily H5404_13040 IPR003439 ABC transporter-like H5404_13040 IPR017871 ABC transporter, conserved site H5404_13040 IPR011917 ABC transporter, lipid A export, MsbA H5404_13040 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_13040 IPR039421 Type I protein exporter H5404_13045 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_13045 IPR003758 Tetraacyldisaccharide 4'-kinase H5404_13050 IPR005651 Trm112-like H5404_13055 IPR003329 Acylneuraminate cytidylyltransferase H5404_13055 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase H5404_13055 IPR029044 Nucleotide-diphospho-sugar transferases H5404_13060 IPR007390 Sporulation stage V, protein R H5404_13065 IPR006698 Uncharacterised protein family UPF0229 H5404_13070 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_13070 IPR016230 Serine-protein kinase, PrkA H5404_13070 IPR013153 PrkA AAA domain H5404_13070 IPR010650 PrkA C-terminal domain H5404_13075 IPR005587 Uncharacterised protein family UPF0304, YfbU H5404_13075 IPR023145 YfbU, helix-hairpin domain superfamily H5404_13075 IPR023146 YfbU, alpha-helical bundle domain superfamily H5404_13085 IPR013785 Aldolase-type TIM barrel H5404_13085 IPR034457 Organic radical-activating enzymes H5404_13085 IPR012839 Organic radical enzyme activase H5404_13085 IPR012838 Pyruvate formate-lyase 1 activating enzyme H5404_13085 IPR034465 Pyruvate formate-lyase activase H5404_13085 IPR001989 Radical-activating enzyme, conserved site H5404_13085 IPR007197 Radical SAM H5404_13095 IPR004184 Pyruvate formate lyase domain H5404_13095 IPR001150 Glycine radical domain H5404_13095 IPR019777 Formate C-acetyltransferase glycine radical, conserved site H5404_13095 IPR005949 Formate acetyltransferase H5404_13110 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_13110 IPR017871 ABC transporter, conserved site H5404_13110 IPR003439 ABC transporter-like H5404_13110 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type H5404_13110 IPR003593 AAA+ ATPase domain H5404_13115 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter H5404_13115 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF H5404_13115 IPR018313 Solute-binding protein family 3, conserved site H5404_13120 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain H5404_13120 IPR030199 Histidine transport system permease protein HisQ H5404_13120 IPR000515 ABC transporter type 1, transmembrane domain MetI-like H5404_13120 IPR035906 MetI-like superfamily H5404_13125 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain H5404_13125 IPR035906 MetI-like superfamily H5404_13125 IPR000515 ABC transporter type 1, transmembrane domain MetI-like H5404_13135 IPR020847 AP endonuclease 1, binding site H5404_13135 IPR005135 Endonuclease/exonuclease/phosphatase H5404_13135 IPR036691 Endonuclease/exonuclease/phosphatase superfamily H5404_13135 IPR020848 AP endonuclease 1, conserved site H5404_13135 IPR037493 Exodeoxyribonuclease III-like H5404_13135 IPR004808 AP endonuclease 1 H5404_13140 IPR019630 Protein of unknown function DUF2496, YbaM-related H5404_13145 IPR010890 Primosomal replication PriB/PriC H5404_13145 IPR038338 PriB/PriC superfamily H5404_13150 IPR002781 Transmembrane protein TauE-like H5404_13155 IPR010614 DEAD2 H5404_13155 IPR039000 ATP-dependent DNA helicase DinG H5404_13155 IPR014013 Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-type H5404_13155 IPR001650 Helicase, C-terminal H5404_13155 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_13155 IPR006555 ATP-dependent helicase, C-terminal H5404_13165 IPR018635 Uncharacterised protein family UPF0319 H5404_13170 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site H5404_13170 IPR006145 Pseudouridine synthase, RsuA/RluA H5404_13170 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F H5404_13170 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain H5404_13170 IPR020103 Pseudouridine synthase, catalytic domain superfamily H5404_13175 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric H5404_13180 IPR012156 Cold shock, CspA H5404_13180 IPR002059 Cold-shock protein, DNA-binding H5404_13180 IPR012340 Nucleic acid-binding, OB-fold H5404_13180 IPR011129 Cold shock domain H5404_13180 IPR012751 CspD, cold shock H5404_13180 IPR019844 Cold-shock (CSD) domain H5404_13185 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like H5404_13185 IPR003769 Adaptor protein ClpS, core H5404_13185 IPR022935 ATP-dependent Clp protease adaptor protein ClpS H5404_13190 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_13190 IPR041546 ClpA/ClpB, AAA lid domain H5404_13190 IPR028299 ClpA/B, conserved site 2 H5404_13190 IPR018368 ClpA/B, conserved site 1 H5404_13190 IPR001270 ClpA/B family H5404_13190 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA H5404_13190 IPR004176 Clp, N-terminal H5404_13190 IPR003593 AAA+ ATPase domain H5404_13190 IPR036628 Clp, N-terminal domain superfamily H5404_13190 IPR019489 Clp ATPase, C-terminal H5404_13190 IPR003959 ATPase, AAA-type, core H5404_13200 IPR004368 Translation initiation factor IF-1 H5404_13200 IPR022967 RNA-binding domain, S1 H5404_13200 IPR006196 RNA-binding domain, S1, IF1 type H5404_13200 IPR012340 Nucleic acid-binding, OB-fold H5404_13205 IPR007472 N-end rule aminoacyl transferase, C-terminal H5404_13205 IPR030700 N-end rule aminoacyl transferase H5404_13205 IPR017138 Aspartate/glutamate leucyltransferase H5404_13205 IPR016181 Acyl-CoA N-acyltransferase H5404_13205 IPR007471 N-end aminoacyl transferase, N-terminal H5404_13210 IPR042203 Leucyl/phenylalanyl-tRNA-protein transferase, C-terminal H5404_13210 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase H5404_13210 IPR016181 Acyl-CoA N-acyltransferase H5404_13220 IPR001986 Enolpyruvate transferase domain H5404_13220 IPR036968 Enolpyruvate transferase domain superfamily H5404_13220 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase H5404_13220 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site H5404_13220 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta H5404_13225 IPR038191 YciN superfamily H5404_13225 IPR019633 Protein of unknown function DUF2498 H5404_13230 IPR000380 DNA topoisomerase, type IA H5404_13230 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 H5404_13230 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 H5404_13230 IPR023405 DNA topoisomerase, type IA, core domain H5404_13230 IPR003602 DNA topoisomerase, type IA, DNA-binding domain H5404_13230 IPR023406 DNA topoisomerase, type IA, active site H5404_13230 IPR013498 DNA topoisomerase, type IA, zn finger H5404_13230 IPR005733 DNA topoisomerase I, bacterial-type H5404_13230 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type H5404_13230 IPR013497 DNA topoisomerase, type IA, central H5404_13230 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 H5404_13230 IPR028612 DNA topoisomerase I, type IA H5404_13230 IPR006171 TOPRIM domain H5404_13230 IPR034149 DNA topoisomerase 1, TOPRIM domain H5404_13230 IPR003601 DNA topoisomerase, type IA, domain 2 H5404_13235 IPR011831 Glucose-1-phosphate adenylyltransferase H5404_13235 IPR029044 Nucleotide-diphospho-sugar transferases H5404_13235 IPR005836 ADP-glucose pyrophosphorylase, conserved site H5404_13235 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial H5404_13235 IPR011004 Trimeric LpxA-like superfamily H5404_13235 IPR005835 Nucleotidyl transferase domain H5404_13240 IPR013534 Starch synthase, catalytic domain H5404_13240 IPR011835 Bacterial/plant glycogen synthase H5404_13240 IPR001296 Glycosyl transferase, family 1 H5404_13260 IPR007077 TfoX, C-terminal H5404_13260 IPR007076 TfoX, N-terminal H5404_13260 IPR026256 Transcriptional regulator, TfoX/Sxy-type H5404_13265 IPR023588 Transcription regulator HTH, PurR H5404_13265 IPR028082 Periplasmic binding protein-like I H5404_13265 IPR010982 Lambda repressor-like, DNA-binding domain superfamily H5404_13265 IPR000843 LacI-type HTH domain H5404_13270 IPR023069 Chaperone TorD H5404_13270 IPR020945 DMSO/Nitrate reductase chaperone H5404_13270 IPR036411 TorD-like superfamily H5404_13270 IPR036386 HscB, C-terminal domain superfamily H5404_13275 IPR001867 OmpR/PhoB-type DNA-binding domain H5404_13275 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_13275 IPR039420 Transcriptional regulatory protein WalR-like H5404_13275 IPR001789 Signal transduction response regulator, receiver domain H5404_13275 IPR011006 CheY-like superfamily H5404_13280 IPR003848 Domain of unknown function DUF218 H5404_13285 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_13285 IPR025714 Methyltransferase domain H5404_13285 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase H5404_13290 IPR033441 Chromosome partition protein MukF, C-terminal domain H5404_13290 IPR038198 MukF, C-terminal domain superfamily H5404_13290 IPR033440 Chromosome partition protein MukF, middle domain H5404_13290 IPR036141 MukF, middle domain superfamily H5404_13290 IPR033439 Chromosome partition protein MukF, winged-helix domain H5404_13290 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_13290 IPR036390 Winged helix DNA-binding domain superfamily H5404_13290 IPR005582 Chromosome partition protein MukF H5404_13295 IPR042037 MukE, C-terminal domain H5404_13295 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE H5404_13295 IPR042038 MukE, N-terminal domain H5404_13300 IPR012090 Chromosome partition protein MukB H5404_13300 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_13300 IPR032520 MukB, hinge domain H5404_13300 IPR007406 MukB, N-terminal domain H5404_13310 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX H5404_13310 IPR013815 ATP-grasp fold, subdomain 1 H5404_13310 IPR011761 ATP-grasp fold H5404_13310 IPR041107 RimK, PreATP-grasp domain H5404_13310 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK H5404_13310 IPR013651 ATP-grasp fold, RimK-type H5404_13320 IPR013651 ATP-grasp fold, RimK-type H5404_13320 IPR011761 ATP-grasp fold H5404_13320 IPR013815 ATP-grasp fold, subdomain 1 H5404_13320 IPR021109 Aspartic peptidase domain superfamily H5404_13320 IPR041107 RimK, PreATP-grasp domain H5404_13320 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX H5404_13320 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK H5404_13325 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_13325 IPR027555 tRNA (mo5U34)-methyltransferase-like H5404_13325 IPR010017 tRNA U34 carboxymethyltransferase H5404_13330 IPR005271 Carboxy-S-adenosyl-L-methionine synthase H5404_13330 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_13330 IPR041698 Methyltransferase domain 25 H5404_13335 IPR036520 UPF0759 superfamily H5404_13335 IPR002763 Protein of unknown function DUF72 H5404_13340 IPR004524 Aspartate-tRNA ligase, type 1 H5404_13340 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type H5404_13340 IPR012340 Nucleic acid-binding, OB-fold H5404_13340 IPR029351 GAD domain H5404_13340 IPR004115 GAD-like domain superfamily H5404_13340 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb H5404_13340 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) H5404_13340 IPR006195 Aminoacyl-tRNA synthetase, class II H5404_13345 IPR002176 Crossover junction endodeoxyribonuclease RuvC H5404_13345 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site H5404_13345 IPR036397 Ribonuclease H superfamily H5404_13345 IPR012337 Ribonuclease H-like superfamily H5404_13350 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding H5404_13350 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain H5404_13350 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site H5404_13350 IPR003660 HAMP domain H5404_13350 IPR004090 Chemotaxis methyl-accepting receptor H5404_13350 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain superfamily H5404_13355 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial H5404_13355 IPR036267 RuvA, C-terminal domain superfamily H5404_13355 IPR011114 Holliday junction DNA helicase RuvA, C-terminal H5404_13355 IPR010994 RuvA domain 2-like H5404_13355 IPR000085 Bacterial DNA recombination protein RuvA H5404_13355 IPR012340 Nucleic acid-binding, OB-fold H5404_13355 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 H5404_13360 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_13360 IPR008823 RuvB C-terminal winged helix domain H5404_13360 IPR003593 AAA+ ATPase domain H5404_13360 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_13360 IPR004605 DNA helicase, Holliday junction RuvB-type H5404_13360 IPR041445 RuvB, AAA lid domain H5404_13360 IPR008824 RuvB-like P-loop domain H5404_13360 IPR036390 Winged helix DNA-binding domain superfamily H5404_13365 IPR002585 Cytochrome ubiquinol oxidase subunit 1 H5404_13370 IPR003317 Cytochrome ubiquinol oxidase subunit 2 H5404_13375 IPR012994 Membrane bound YbgT-like H5404_13375 IPR011724 Cyd operon protein YbgT H5404_13385 IPR006683 Thioesterase domain H5404_13385 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family H5404_13385 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase H5404_13385 IPR029069 HotDog domain superfamily H5404_13385 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site H5404_13390 IPR002898 MotA/TolQ/ExbB proton channel H5404_13390 IPR014163 Tol-Pal system, TolQ H5404_13395 IPR014168 Tol-Pal system protein TolR H5404_13395 IPR003400 Biopolymer transport protein ExbD/TolR H5404_13405 IPR011042 Six-bladed beta-propeller, TolB-like H5404_13405 IPR036752 TolB, N-terminal domain superfamily H5404_13405 IPR007195 TolB, N-terminal H5404_13405 IPR014167 Tol-Pal system protein TolB H5404_13405 IPR011659 WD40-like Beta Propeller H5404_13410 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal H5404_13410 IPR039001 Peptidoglycan-associated lipoprotein H5404_13410 IPR036737 OmpA-like domain superfamily H5404_13410 IPR006690 Outer membrane protein, OmpA-like, conserved site H5404_13410 IPR006665 OmpA-like domain H5404_13410 IPR006664 Outer membrane protein, bacterial H5404_13415 IPR011990 Tetratricopeptide-like helical domain superfamily H5404_13415 IPR019734 Tetratricopeptide repeat H5404_13415 IPR032519 YbgF, trimerisation domain H5404_13415 IPR034706 Cell division coordinator CpoB H5404_13415 IPR013026 Tetratricopeptide repeat-containing domain H5404_13415 IPR014162 Cell division coordinator CpoB, C-terminal H5404_13420 IPR003473 Quinolinate synthetase A H5404_13420 IPR023513 Quinolinate synthase A, type 1 H5404_13420 IPR036094 Quinolinate synthetase A superfamily H5404_13430 IPR007140 Protein of unknown function DUF350 H5404_13440 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain H5404_13440 IPR016185 Pre-ATP-grasp domain superfamily H5404_13450 IPR003594 Histidine kinase/HSP90-like ATPase H5404_13450 IPR001789 Signal transduction response regulator, receiver domain H5404_13450 IPR004358 Signal transduction histidine kinase-related protein, C-terminal H5404_13450 IPR029151 Periplasmic sensor-like domain superfamily H5404_13450 IPR015387 LuxQ, periplasmic H5404_13450 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily H5404_13450 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain H5404_13450 IPR005467 Histidine kinase domain H5404_13450 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_13450 IPR011006 CheY-like superfamily H5404_13455 IPR010574 L-alanine exporter AlaE H5404_13465 IPR011010 DNA breaking-rejoining enzyme, catalytic core H5404_13465 IPR002104 Integrase, catalytic domain H5404_13465 IPR038488 Integrase, DNA-binding domain superfamily H5404_13465 IPR025166 Integrase, DNA-binding domain H5404_13465 IPR010998 Integrase/recombinase, N-terminal H5404_13465 IPR013762 Integrase-like, catalytic domain superfamily H5404_13500 IPR002156 Ribonuclease H domain H5404_13500 IPR022892 Ribonuclease HI H5404_13500 IPR012337 Ribonuclease H-like superfamily H5404_13500 IPR036397 Ribonuclease H superfamily H5404_13515 IPR020891 Uncharacterised protein family UPF0758, conserved site H5404_13515 IPR001405 Uncharacterised protein family UPF0758 H5404_13515 IPR025657 RadC-like JAB domain H5404_13515 IPR037518 MPN domain H5404_13545 IPR000055 Restriction endonuclease, type I, HsdS H5404_13560 IPR004473 Restriction endonuclease, type I, HsdR H5404_13560 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal H5404_13560 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_13560 IPR021810 Protein of unknown function DUF3387 H5404_13560 IPR040980 SWI2/SNF2 ATPase H5404_13560 IPR014001 Helicase superfamily 1/2, ATP-binding domain H5404_13580 IPR000330 SNF2-related, N-terminal domain H5404_13580 IPR038718 SNF2-like, N-terminal domain superfamily H5404_13580 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_13580 IPR022138 Helicase SWF/SNF-related H5404_13580 IPR001650 Helicase, C-terminal H5404_13580 IPR014001 Helicase superfamily 1/2, ATP-binding domain H5404_13585 IPR003660 HAMP domain H5404_13585 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain H5404_13585 IPR000727 Target SNARE coiled-coil homology domain H5404_13585 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain H5404_13585 IPR004090 Chemotaxis methyl-accepting receptor H5404_13590 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain H5404_13590 IPR006143 RND efflux pump, membrane fusion protein H5404_13595 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 H5404_13595 IPR001036 Acriflavin resistance protein H5404_13595 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains H5404_13610 IPR002306 Tryptophan-tRNA ligase H5404_13610 IPR024109 Tryptophan-tRNA ligase, bacterial-type H5404_13610 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold H5404_13610 IPR002305 Aminoacyl-tRNA synthetase, class Ic H5404_13610 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site H5404_13620 IPR036691 Endonuclease/exonuclease/phosphatase superfamily H5404_13620 IPR005135 Endonuclease/exonuclease/phosphatase H5404_13620 IPR017766 Sphingomyelinase C/phospholipase C H5404_13625 IPR010386 tRNA-hydroxylase MiaE H5404_13625 IPR012347 Ferritin-like H5404_13625 IPR009078 Ferritin-like superfamily H5404_13635 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_13635 IPR036390 Winged helix DNA-binding domain superfamily H5404_13635 IPR000847 Transcription regulator HTH, LysR H5404_13635 IPR005119 LysR, substrate-binding H5404_13645 IPR008141 Alanine dehydrogenase H5404_13645 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 H5404_13645 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal H5404_13645 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain H5404_13645 IPR036291 NAD(P)-binding domain superfamily H5404_13650 IPR011991 ArsR-like helix-turn-helix domain H5404_13650 IPR000485 AsnC-type HTH domain H5404_13650 IPR011008 Dimeric alpha-beta barrel H5404_13650 IPR019888 Transcription regulator AsnC-type H5404_13650 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain H5404_13650 IPR019885 Transcription regulator HTH, AsnC-type, conserved site H5404_13650 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_13650 IPR036390 Winged helix DNA-binding domain superfamily H5404_13655 IPR041027 FtsK alpha domain H5404_13655 IPR002543 FtsK domain H5404_13655 IPR018541 FtsK gamma domain H5404_13655 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_13655 IPR036390 Winged helix DNA-binding domain superfamily H5404_13655 IPR025199 DNA translocase FtsK, 4TM region H5404_13655 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_13660 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria H5404_13660 IPR004564 Outer membrane lipoprotein carrier protein LolA-like H5404_13660 IPR029046 Lipoprotein localisation LolA/LolB/LppX H5404_13665 IPR003593 AAA+ ATPase domain H5404_13665 IPR032423 AAA C-terminal domain H5404_13665 IPR003959 ATPase, AAA-type, core H5404_13665 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal H5404_13665 IPR021886 MgsA AAA+ ATPase C-terminal H5404_13665 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_13670 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) H5404_13670 IPR002317 Serine-tRNA ligase, type1 H5404_13670 IPR015866 Serine-tRNA synthetase, type1, N-terminal H5404_13670 IPR042103 Serine-tRNA synthetase, type1, N-terminal domain superfamily H5404_13670 IPR033729 Serine-tRNA ligase catalytic core domain H5404_13670 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm H5404_13670 IPR006195 Aminoacyl-tRNA synthetase, class II H5404_13685 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria H5404_13685 IPR000962 Zinc finger, DksA/TraR C4-type H5404_13685 IPR020458 Zinc finger, DksA/TraR C4-type conserved site H5404_13690 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA H5404_13690 IPR015424 Pyridoxal phosphate-dependent transferase H5404_13690 IPR005814 Aminotransferase class-III H5404_13690 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 H5404_13690 IPR015421 Pyridoxal phosphate-dependent transferase, major domain H5404_13695 IPR010722 Biotin and thiamin synthesis-associated domain H5404_13695 IPR013785 Aldolase-type TIM barrel H5404_13695 IPR007197 Radical SAM H5404_13695 IPR024177 Biotin synthase H5404_13695 IPR006638 Elp3/MiaB/NifB H5404_13695 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB H5404_13700 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 H5404_13700 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site H5404_13700 IPR004839 Aminotransferase, class I/classII H5404_13700 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type H5404_13700 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria H5404_13700 IPR015424 Pyridoxal phosphate-dependent transferase H5404_13700 IPR015421 Pyridoxal phosphate-dependent transferase, major domain H5404_13705 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC H5404_13705 IPR013216 Methyltransferase type 11 H5404_13705 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_13710 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_13710 IPR004472 Dethiobiotin synthase BioD H5404_13720 IPR001915 Peptidase M48 H5404_13720 IPR022919 Peptidase M48, protease HtpX, putative H5404_13730 IPR036291 NAD(P)-binding domain superfamily H5404_13730 IPR020904 Short-chain dehydrogenase/reductase, conserved site H5404_13730 IPR002347 Short-chain dehydrogenase/reductase SDR H5404_13745 IPR003333 Mycolic acid cyclopropane synthase H5404_13745 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_13765 IPR008948 L-Aspartase-like H5404_13765 IPR024083 Fumarase/histidase, N-terminal H5404_13765 IPR020557 Fumarate lyase, conserved site H5404_13765 IPR000362 Fumarate lyase family H5404_13765 IPR022761 Fumarate lyase, N-terminal H5404_13765 IPR004769 Adenylosuccinate lyase H5404_13765 IPR013539 Adenylosuccinate lyase PurB, C-terminal H5404_13770 IPR035932 HflD-like superfamily H5404_13770 IPR007451 High frequency lysogenization protein HflD H5404_13775 IPR023382 Adenine nucleotide alpha hydrolase-like domains H5404_13775 IPR004506 tRNA-specific 2-thiouridylase H5404_13775 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold H5404_13785 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site H5404_13785 IPR029056 Ribokinase-like H5404_13785 IPR011611 Carbohydrate kinase PfkB H5404_13790 IPR027454 Histone-like protein H-NS, N-terminal H5404_13790 IPR027444 Histone-like protein H-NS, C-terminal domain H5404_13790 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily H5404_13790 IPR001801 Histone-like protein H-NS H5404_13795 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal H5404_13805 IPR003593 AAA+ ATPase domain H5404_13805 IPR011006 CheY-like superfamily H5404_13805 IPR009057 Homeobox-like domain superfamily H5404_13805 IPR002197 DNA binding HTH domain, Fis-type H5404_13805 IPR025944 Sigma-54 interaction domain, conserved site H5404_13805 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 H5404_13805 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 H5404_13805 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_13805 IPR002078 RNA polymerase sigma factor 54 interaction domain H5404_13805 IPR001789 Signal transduction response regulator, receiver domain H5404_13810 IPR013820 ATP phosphoribosyltransferase, catalytic domain H5404_13810 IPR013115 Histidine biosynthesis HisG, C-terminal H5404_13810 IPR011322 Nitrogen regulatory PII-like, alpha/beta H5404_13810 IPR018198 ATP phosphoribosyltransferase, conserved site H5404_13810 IPR001348 ATP phosphoribosyltransferase HisG H5404_13810 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal H5404_13810 IPR020621 ATP phosphoribosyltransferase HisG, long form H5404_13815 IPR012131 Histidinol dehydrogenase H5404_13815 IPR001692 Histidinol dehydrogenase, conserved site H5404_13815 IPR022695 Histidinol dehydrogenase, monofunctional H5404_13815 IPR016161 Aldehyde/histidinol dehydrogenase H5404_13820 IPR004839 Aminotransferase, class I/classII H5404_13820 IPR005861 Histidinol-phosphate aminotransferase family H5404_13820 IPR015424 Pyridoxal phosphate-dependent transferase H5404_13820 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 H5404_13820 IPR015421 Pyridoxal phosphate-dependent transferase, major domain H5404_13820 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site H5404_13825 IPR036412 HAD-like superfamily H5404_13825 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site H5404_13825 IPR020568 Ribosomal protein S5 domain 2-type fold H5404_13825 IPR006549 HAD-superfamily hydrolase,subfamily IIIA H5404_13825 IPR020566 Histidine biosynthesis bifunctional protein HisB H5404_13825 IPR013954 Polynucleotide kinase 3 phosphatase H5404_13825 IPR006543 Histidinol-phosphate phosphatase H5404_13825 IPR000807 Imidazoleglycerol-phosphate dehydratase H5404_13825 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily H5404_13825 IPR005954 Histidinol-phosphatase H5404_13825 IPR023214 HAD superfamily H5404_13830 IPR017926 Glutamine amidotransferase H5404_13830 IPR029062 Class I glutamine amidotransferase-like H5404_13830 IPR010139 Imidazole glycerol phosphate synthase, subunit H H5404_13835 IPR013785 Aldolase-type TIM barrel H5404_13835 IPR006062 Histidine biosynthesis H5404_13835 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA H5404_13835 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase H5404_13835 IPR011060 Ribulose-phosphate binding barrel H5404_13840 IPR013785 Aldolase-type TIM barrel H5404_13840 IPR006062 Histidine biosynthesis H5404_13840 IPR004651 Histidine biosynthesis, HisF H5404_13840 IPR011060 Ribulose-phosphate binding barrel H5404_13845 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain H5404_13845 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily H5404_13845 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase H5404_13845 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like H5404_13845 IPR023019 Histidine biosynthesis bifunctional protein HisIE H5404_13850 IPR004027 SEC-C motif H5404_13850 IPR032710 NTF2-like domain superfamily H5404_13850 IPR023006 Uncharacterised protein family UPF0225 H5404_13855 IPR035919 EAL domain superfamily H5404_13855 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing H5404_13855 IPR013976 Metal-dependent hydrolase HDOD H5404_13855 IPR001633 EAL domain H5404_13860 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type H5404_13860 IPR029052 Metallo-dependent phosphatase-like H5404_13860 IPR010138 UDP-2,3-diacylglucosamine hydrolase H5404_13865 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site H5404_13865 IPR029000 Cyclophilin-like domain superfamily H5404_13865 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain H5404_13865 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase H5404_13870 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR H5404_13870 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase H5404_13870 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding H5404_13870 IPR032678 tRNA synthetases class I, catalytic domain H5404_13870 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold H5404_13870 IPR015803 Cysteine-tRNA ligase H5404_13875 IPR020633 Thymidine kinase, conserved site H5404_13875 IPR001267 Thymidine kinase H5404_13875 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_13880 IPR003848 Domain of unknown function DUF218 H5404_13880 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold H5404_13905 IPR000292 Formate/nitrite transporter H5404_13905 IPR024002 Formate/nitrite transporter, conserved site H5404_13905 IPR023999 Formate transporter FocA, putative H5404_13905 IPR023271 Aquaporin-like H5404_13915 IPR005226 UPF0014 family H5404_13920 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE H5404_13920 IPR004448 Nitrate reductas, NapE, periplasmic H5404_13925 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT H5404_13925 IPR038266 NapC/NirT cytochrome c superfamily H5404_13925 IPR005126 NapC/NirT cytochrome c, N-terminal H5404_13925 IPR011031 Multihaem cytochrome H5404_13925 IPR024717 Denitrification system component NapC/NirT/NrfH H5404_13925 IPR036280 Multiheme cytochrome superfamily H5404_13930 IPR011887 Trimethylamine-N-oxide reductase TorA H5404_13930 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site H5404_13930 IPR006656 Molybdopterin oxidoreductase H5404_13930 IPR006657 Molybdopterin dinucleotide-binding domain H5404_13930 IPR041460 Molybdopterin oxidoreductase, N-terminal H5404_13930 IPR041954 Trimethylamine-N-oxide reductase-like, molybdopterin-binding domain H5404_13930 IPR009010 Aspartate decarboxylase-like domain superfamily H5404_13930 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal H5404_13930 IPR006311 Twin-arginine translocation pathway, signal sequence H5404_13935 IPR031704 Glycosyl hydrolase family 36, N-terminal H5404_13935 IPR031705 Glycosyl hydrolase family 36, C-terminal H5404_13935 IPR002252 Glycoside hydrolase family 36 H5404_13935 IPR000111 Glycoside hydrolase family 27/36, conserved site H5404_13935 IPR013785 Aldolase-type TIM barrel H5404_13935 IPR017853 Glycoside hydrolase superfamily H5404_13935 IPR038417 Alpha-galactosidase, N-terminal domain superfamily H5404_13945 IPR004097 DHHA2 domain H5404_13945 IPR038222 DHHA2 domain superfamily H5404_13945 IPR022934 Manganese-dependent inorganic pyrophosphatase, probable H5404_13945 IPR001667 DDH domain H5404_13945 IPR038763 DHH phosphoesterase superfamily H5404_13955 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_13955 IPR017871 ABC transporter, conserved site H5404_13955 IPR003439 ABC transporter-like H5404_13955 IPR003593 AAA+ ATPase domain H5404_13960 IPR003593 AAA+ ATPase domain H5404_13960 IPR003439 ABC transporter-like H5404_13960 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_13960 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal H5404_13965 IPR000515 ABC transporter type 1, transmembrane domain MetI-like H5404_13965 IPR035906 MetI-like superfamily H5404_13965 IPR025966 Oligopeptide transport permease C-like, N-terminal domain H5404_13970 IPR000515 ABC transporter type 1, transmembrane domain MetI-like H5404_13970 IPR035906 MetI-like superfamily H5404_13975 IPR023765 Solute-binding protein family 5, conserved site H5404_13975 IPR030678 Peptide/nickel binding protein, MppA-type H5404_13975 IPR039424 Solute-binding protein family 5 H5404_13975 IPR000914 Solute-binding protein family 5 domain H5404_13980 IPR003593 AAA+ ATPase domain H5404_13980 IPR009057 Homeobox-like domain superfamily H5404_13980 IPR002197 DNA binding HTH domain, Fis-type H5404_13980 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_13980 IPR002078 RNA polymerase sigma factor 54 interaction domain H5404_13980 IPR025944 Sigma-54 interaction domain, conserved site H5404_13980 IPR014317 Transcription activator PspF H5404_13980 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 H5404_13985 IPR014319 Phage shock protein, PspA H5404_13985 IPR007157 PspA/IM30 H5404_13990 IPR009554 Phage shock protein B H5404_13995 IPR007168 Phage shock protein, PspC, N-terminal H5404_13995 IPR014320 Phage shock protein, PspC H5404_14000 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain H5404_14000 IPR006143 RND efflux pump, membrane fusion protein H5404_14005 IPR006143 RND efflux pump, membrane fusion protein H5404_14005 IPR022824 Multidrug resistance protein MdtA H5404_14005 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain H5404_14010 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains H5404_14010 IPR001036 Acriflavin resistance protein H5404_14015 IPR004597 DNA-3-methyladenine glycosylase I H5404_14015 IPR011257 DNA glycosylase H5404_14015 IPR005019 Methyladenine glycosylase H5404_14020 IPR004961 Lipase chaperone H5404_14025 IPR000073 Alpha/beta hydrolase fold-1 H5404_14025 IPR029058 Alpha/Beta hydrolase fold H5404_14030 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 H5404_14030 IPR006233 Cystathionine beta-lyase, bacterial H5404_14030 IPR015424 Pyridoxal phosphate-dependent transferase H5404_14030 IPR015421 Pyridoxal phosphate-dependent transferase, major domain H5404_14030 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme H5404_14035 IPR027379 Cardiolipin synthase N-terminal H5404_14035 IPR030840 Cardiolipin synthase A H5404_14035 IPR022924 Cardiolipin synthase H5404_14035 IPR025202 Phospholipase D-like domain H5404_14035 IPR001736 Phospholipase D/Transphosphatidylase H5404_14040 IPR000175 Sodium:neurotransmitter symporter H5404_14040 IPR037272 Sodium:neurotransmitter symporter superfamily H5404_14045 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain H5404_14045 IPR004090 Chemotaxis methyl-accepting receptor H5404_14045 IPR003660 HAMP domain H5404_14045 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain H5404_14045 IPR000727 Target SNARE coiled-coil homology domain H5404_14050 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site H5404_14050 IPR006508 Pseudouridine synthase, RluA-like H5404_14050 IPR020103 Pseudouridine synthase, catalytic domain superfamily H5404_14050 IPR006145 Pseudouridine synthase, RsuA/RluA H5404_14060 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain H5404_14060 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain H5404_14060 IPR017927 FAD-binding domain, ferredoxin reductase-type H5404_14060 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain H5404_14060 IPR012675 Beta-grasp domain superfamily H5404_14060 IPR036010 2Fe-2S ferredoxin-like superfamily H5404_14060 IPR000951 Phthalate dioxygenase reductase H5404_14060 IPR017938 Riboflavin synthase-like beta-barrel H5404_14060 IPR001433 Oxidoreductase FAD/NAD(P)-binding H5404_14065 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase H5404_14065 IPR010048 Hydroxylamine reductase H5404_14065 IPR016099 Prismane-like, alpha/beta-sandwich H5404_14065 IPR011254 Prismane-like superfamily H5404_14065 IPR016100 Prismane, alpha-bundle H5404_14070 IPR025944 Sigma-54 interaction domain, conserved site H5404_14070 IPR009057 Homeobox-like domain superfamily H5404_14070 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 H5404_14070 IPR002078 RNA polymerase sigma factor 54 interaction domain H5404_14070 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_14070 IPR029016 GAF-like domain superfamily H5404_14070 IPR003018 GAF domain H5404_14070 IPR003593 AAA+ ATPase domain H5404_14070 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 H5404_14080 IPR000462 CDP-alcohol phosphatidyltransferase H5404_14085 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_14085 IPR003439 ABC transporter-like H5404_14085 IPR017871 ABC transporter, conserved site H5404_14085 IPR003593 AAA+ ATPase domain H5404_14090 IPR000515 ABC transporter type 1, transmembrane domain MetI-like H5404_14090 IPR035906 MetI-like superfamily H5404_14095 IPR006059 Bacterial extracellular solute-binding protein H5404_14095 IPR027020 Protein ynjB H5404_14100 IPR032816 SNARE associated Golgi protein H5404_14110 IPR028261 Dihydroprymidine dehydrogenase domain II H5404_14110 IPR036188 FAD/NAD(P)-binding domain superfamily H5404_14110 IPR023753 FAD/NAD(P)-binding domain H5404_14110 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 H5404_14110 IPR009051 Alpha-helical ferredoxin H5404_14120 IPR003594 Histidine kinase/HSP90-like ATPase H5404_14120 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_14120 IPR005467 Histidine kinase domain H5404_14120 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain H5404_14120 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily H5404_14120 IPR004358 Signal transduction histidine kinase-related protein, C-terminal H5404_14125 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_14125 IPR000792 Transcription regulator LuxR, C-terminal H5404_14125 IPR001789 Signal transduction response regulator, receiver domain H5404_14125 IPR011006 CheY-like superfamily H5404_14135 IPR010710 Protein of unknown function DUF1289 H5404_14145 IPR006146 5'-Nucleotidase, conserved site H5404_14145 IPR006179 5'-Nucleotidase/apyrase H5404_14145 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type H5404_14145 IPR029052 Metallo-dependent phosphatase-like H5404_14145 IPR036907 5'-Nucleotidase, C-terminal domain superfamily H5404_14145 IPR008334 5'-Nucleotidase, C-terminal H5404_14160 IPR020055 Ribosomal protein L25, short-form H5404_14160 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily H5404_14160 IPR029751 Ribosomal protein L25 H5404_14160 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal H5404_14165 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily H5404_14165 IPR005467 Histidine kinase domain H5404_14165 IPR004358 Signal transduction histidine kinase-related protein, C-terminal H5404_14165 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_14165 IPR003594 Histidine kinase/HSP90-like ATPase H5404_14165 IPR003660 HAMP domain H5404_14170 IPR001789 Signal transduction response regulator, receiver domain H5404_14170 IPR016032 Signal transduction response regulator, C-terminal effector H5404_14170 IPR011006 CheY-like superfamily H5404_14170 IPR001867 OmpR/PhoB-type DNA-binding domain H5404_14170 IPR039420 Transcriptional regulatory protein WalR-like H5404_14170 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_14180 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_14180 IPR006935 Helicase/UvrB, N-terminal H5404_14180 IPR014001 Helicase superfamily 1/2, ATP-binding domain H5404_14180 IPR011332 Zinc-binding ribosomal protein H5404_14180 IPR001650 Helicase, C-terminal H5404_14185 IPR036986 RNA-binding S4 domain superfamily H5404_14185 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain H5404_14185 IPR020103 Pseudouridine synthase, catalytic domain superfamily H5404_14185 IPR006145 Pseudouridine synthase, RsuA/RluA H5404_14185 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F H5404_14185 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site H5404_14185 IPR002942 RNA-binding S4 domain H5404_14190 IPR036259 MFS transporter superfamily H5404_14190 IPR004734 Multidrug resistance protein H5404_14190 IPR011701 Major facilitator superfamily H5404_14190 IPR020846 Major facilitator superfamily domain H5404_14190 IPR004812 Drug resistance transporter Bcr/CmlA subfamily H5404_14205 IPR010177 Doubled CXXCH motif H5404_14205 IPR036280 Multiheme cytochrome superfamily H5404_14205 IPR011031 Multihaem cytochrome H5404_14205 IPR020015 Decaheme cytochrome, c-type, DmsE H5404_14220 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK H5404_14220 IPR011031 Multihaem cytochrome H5404_14220 IPR036280 Multiheme cytochrome superfamily H5404_14220 IPR005126 NapC/NirT cytochrome c, N-terminal H5404_14220 IPR038266 NapC/NirT cytochrome c superfamily H5404_14225 IPR016040 NAD(P)-binding domain H5404_14225 IPR036291 NAD(P)-binding domain superfamily H5404_14225 IPR021295 Protein of unknown function DUF2867 H5404_14230 IPR002528 Multi antimicrobial extrusion protein H5404_14235 IPR003593 AAA+ ATPase domain H5404_14235 IPR003439 ABC transporter-like H5404_14235 IPR017871 ABC transporter, conserved site H5404_14235 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_14250 IPR004670 Na+/H+ antiporter NhaA H5404_14250 IPR023171 Na/H antiporter domain superfamily H5404_14255 IPR032551 HTH-type transcriptional repressor, C-terminal H5404_14255 IPR009057 Homeobox-like domain superfamily H5404_14255 IPR001647 DNA-binding HTH domain, TetR-type H5404_14255 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily H5404_14255 IPR023772 DNA-binding HTH domain, TetR-type, conserved site H5404_14260 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily H5404_14260 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal H5404_14260 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal H5404_14260 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal H5404_14260 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily H5404_14260 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain H5404_14260 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type H5404_14265 IPR024906 Enoyl reductase FAD binding domain H5404_14265 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative H5404_14265 IPR010758 Trans-2-enoyl-CoA reductase H5404_14270 IPR006512 YidE/YbjL duplication H5404_14270 IPR023017 Transport protein YbjL, putative H5404_14270 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily H5404_14270 IPR006037 Regulator of K+ conductance, C-terminal H5404_14275 IPR011902 Glutaredoxin, GrxA H5404_14275 IPR014025 Glutaredoxin subgroup H5404_14275 IPR002109 Glutaredoxin H5404_14275 IPR036249 Thioredoxin-like superfamily H5404_14280 IPR018211 Alcohol dehydrogenase, iron-type, conserved site H5404_14280 IPR039697 Iron-type alcohol dehydrogenase-like H5404_14280 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA H5404_14285 IPR009057 Homeobox-like domain superfamily H5404_14285 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_14285 IPR001347 Sugar isomerase (SIS) H5404_14285 IPR035472 RpiR-like, SIS domain H5404_14285 IPR000281 Helix-turn-helix protein RpiR H5404_14290 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent H5404_14290 IPR002129 Pyridoxal phosphate-dependent decarboxylase H5404_14290 IPR015424 Pyridoxal phosphate-dependent transferase H5404_14290 IPR015421 Pyridoxal phosphate-dependent transferase, major domain H5404_14300 IPR005642 Lysine exporter LysO H5404_14310 IPR007077 TfoX, C-terminal H5404_14310 IPR007076 TfoX, N-terminal H5404_14310 IPR026256 Transcriptional regulator, TfoX/Sxy-type H5404_14325 IPR005467 Histidine kinase domain H5404_14325 IPR003594 Histidine kinase/HSP90-like ATPase H5404_14325 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_14325 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF H5404_14325 IPR004358 Signal transduction histidine kinase-related protein, C-terminal H5404_14325 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain H5404_14325 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily H5404_14335 IPR022278 Phosphoserine aminotransferase H5404_14335 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 H5404_14335 IPR015424 Pyridoxal phosphate-dependent transferase H5404_14335 IPR015421 Pyridoxal phosphate-dependent transferase, major domain H5404_14335 IPR000192 Aminotransferase class V domain H5404_14335 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site H5404_14340 IPR011780 D-serine ammonia-lyase H5404_14340 IPR001926 Pyridoxal-phosphate dependent enzyme H5404_14340 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site H5404_14340 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme H5404_14345 IPR017871 ABC transporter, conserved site H5404_14345 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_14345 IPR003439 ABC transporter-like H5404_14345 IPR011527 ABC transporter type 1, transmembrane domain H5404_14345 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC H5404_14345 IPR036640 ABC transporter type 1, transmembrane domain superfamily H5404_14345 IPR003593 AAA+ ATPase domain H5404_14350 IPR003439 ABC transporter-like H5404_14350 IPR036640 ABC transporter type 1, transmembrane domain superfamily H5404_14350 IPR011527 ABC transporter type 1, transmembrane domain H5404_14350 IPR003593 AAA+ ATPase domain H5404_14350 IPR039421 Type I protein exporter H5404_14350 IPR017871 ABC transporter, conserved site H5404_14350 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD H5404_14350 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_14355 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site H5404_14355 IPR005982 Thioredoxin reductase H5404_14355 IPR023753 FAD/NAD(P)-binding domain H5404_14355 IPR036188 FAD/NAD(P)-binding domain superfamily H5404_14365 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 H5404_14365 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site H5404_14365 IPR000192 Aminotransferase class V domain H5404_14365 IPR010970 Cysteine desulfurase, SufS H5404_14365 IPR015424 Pyridoxal phosphate-dependent transferase H5404_14365 IPR015421 Pyridoxal phosphate-dependent transferase, major domain H5404_14375 IPR011006 CheY-like superfamily H5404_14375 IPR000160 GGDEF domain H5404_14375 IPR001789 Signal transduction response regulator, receiver domain H5404_14375 IPR029787 Nucleotide cyclase H5404_14380 IPR031312 Sodium/sulphate symporter, conserved site H5404_14380 IPR001898 Solute carrier family 13 H5404_14385 IPR023604 Uncharacterised protein family SanA H5404_14385 IPR003848 Domain of unknown function DUF218 H5404_14390 IPR012301 Malic enzyme, N-terminal domain H5404_14390 IPR001891 Malic oxidoreductase H5404_14390 IPR037062 Malic enzyme, N-terminal domain superfamily H5404_14390 IPR012302 Malic enzyme, NAD-binding H5404_14390 IPR036291 NAD(P)-binding domain superfamily H5404_14390 IPR015884 Malic enzyme, conserved site H5404_14390 IPR023667 NAD-dependent malic enzyme, proteobacteria H5404_14395 IPR011545 DEAD/DEAH box helicase domain H5404_14395 IPR007502 Helicase-associated domain H5404_14395 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_14395 IPR010225 ATP-dependent helicase HrpB H5404_14395 IPR001650 Helicase, C-terminal H5404_14395 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal H5404_14395 IPR014001 Helicase superfamily 1/2, ATP-binding domain H5404_14400 IPR003187 Phospholipase A1 H5404_14400 IPR036541 Phospholipase A1 superfamily H5404_14410 IPR038607 PhoD-like superfamily H5404_14410 IPR006311 Twin-arginine translocation pathway, signal sequence H5404_14410 IPR018946 Alkaline phosphatase D-related H5404_14410 IPR032093 Phospholipase D, N-terminal H5404_14410 IPR008963 Purple acid phosphatase-like, N-terminal H5404_14415 IPR028923 SAICAR synthetase/ADE2, N-terminal H5404_14415 IPR018236 SAICAR synthetase, conserved site H5404_14415 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type H5404_14435 IPR028974 TSP type-3 repeat H5404_14435 IPR008722 Outer membrane porin F, N-terminal H5404_14435 IPR036737 OmpA-like domain superfamily H5404_14435 IPR006690 Outer membrane protein, OmpA-like, conserved site H5404_14435 IPR006665 OmpA-like domain H5404_14435 IPR006664 Outer membrane protein, bacterial H5404_14435 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel H5404_14450 IPR036318 FAD-binding, type PCMH-like superfamily H5404_14450 IPR016166 FAD-binding domain, PCMH-type H5404_14450 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain H5404_14450 IPR016164 FAD-linked oxidase-like, C-terminal H5404_14450 IPR004113 FAD-linked oxidase, C-terminal H5404_14450 IPR009051 Alpha-helical ferredoxin H5404_14450 IPR006094 FAD linked oxidase, N-terminal H5404_14450 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site H5404_14455 IPR007318 Phospholipid methyltransferase H5404_14465 IPR008948 L-Aspartase-like H5404_14465 IPR022313 Phenylalanine/histidine ammonia-lyases, active site H5404_14465 IPR001106 Aromatic amino acid lyase H5404_14465 IPR024083 Fumarase/histidase, N-terminal H5404_14465 IPR005921 Histidine ammonia-lyase H5404_14470 IPR035400 Urocanase, N-terminal domain H5404_14470 IPR023636 Urocanase conserved site H5404_14470 IPR038364 Urocanase, central domain superfamily H5404_14470 IPR035401 Urocanase, C-terminal domain H5404_14470 IPR023637 Urocanase H5404_14470 IPR036190 Urocanase superfamily H5404_14470 IPR035085 Urocanase, Rossmann-like domain H5404_14475 IPR020855 Ureohydrolase, manganese-binding site H5404_14475 IPR023696 Ureohydrolase domain superfamily H5404_14475 IPR006035 Ureohydrolase H5404_14475 IPR005923 Formiminoglutamase H5404_14480 IPR011059 Metal-dependent hydrolase, composite domain superfamily H5404_14480 IPR005920 Imidazolonepropionase H5404_14480 IPR006680 Amidohydrolase-related H5404_14480 IPR032466 Metal-dependent hydrolase H5404_14485 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily H5404_14485 IPR036390 Winged helix DNA-binding domain superfamily H5404_14485 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_14485 IPR011663 UbiC transcription regulator-associated H5404_14485 IPR000524 Transcription regulator HTH, GntR H5404_14485 IPR010248 Histidine utilization repressor H5404_14500 IPR012947 Threonyl/alanyl tRNA synthetase, SAD H5404_14500 IPR036621 Anticodon-binding domain superfamily H5404_14500 IPR006195 Aminoacyl-tRNA synthetase, class II H5404_14500 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) H5404_14500 IPR012675 Beta-grasp domain superfamily H5404_14500 IPR004095 TGS H5404_14500 IPR012676 TGS-like H5404_14500 IPR002320 Threonine-tRNA ligase, class IIa H5404_14500 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily H5404_14500 IPR033728 Threonine-tRNA ligase catalytic core domain H5404_14500 IPR004154 Anticodon-binding H5404_14505 IPR019814 Translation initiation factor 3, N-terminal H5404_14505 IPR019815 Translation initiation factor 3, C-terminal H5404_14505 IPR001288 Translation initiation factor 3 H5404_14505 IPR019813 Translation initiation factor 3, conserved site H5404_14505 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily H5404_14505 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily H5404_14510 IPR018265 Ribosomal protein L35, conserved site H5404_14510 IPR021137 Ribosomal protein L35 H5404_14510 IPR037229 Ribosomal protein L35 superfamily H5404_14510 IPR001706 Ribosomal protein L35, non-mitochondrial H5404_14515 IPR005813 Ribosomal protein L20 H5404_14515 IPR035566 Ribosomal protein L20, C-terminal H5404_14520 IPR035439 UPF0145 domain superfamily H5404_14520 IPR002765 Uncharacterised protein family UPF0145 H5404_14550 IPR033424 Membrane-associated sensor domain H5404_14550 IPR000160 GGDEF domain H5404_14550 IPR029787 Nucleotide cyclase H5404_14555 IPR006195 Aminoacyl-tRNA synthetase, class II H5404_14555 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal H5404_14555 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial H5404_14555 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit H5404_14555 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm H5404_14555 IPR002319 Phenylalanyl-tRNA synthetase H5404_14560 IPR005146 B3/B4 tRNA-binding domain H5404_14560 IPR005147 tRNA synthetase, B5-domain H5404_14560 IPR002547 tRNA-binding domain H5404_14560 IPR041616 Phenylalanyl tRNA synthetase beta chain, core domain H5404_14560 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 H5404_14560 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit H5404_14560 IPR012340 Nucleic acid-binding, OB-fold H5404_14560 IPR033714 Phenylalanly tRNA synthetase, tRNA-binding-domain H5404_14560 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily H5404_14560 IPR005121 Ferrodoxin-fold anticodon-binding domain H5404_14560 IPR009061 Putative DNA-binding domain superfamily H5404_14570 IPR005684 Integration host factor, alpha subunit H5404_14570 IPR000119 Histone-like DNA-binding protein H5404_14570 IPR020816 Histone-like DNA-binding protein, conserved site H5404_14570 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily H5404_14580 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification H5404_14580 IPR025835 Thiopurine S-methyltransferase H5404_14580 IPR008854 TPMT family H5404_14580 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_14585 IPR011054 Rudiment single hybrid motif H5404_14585 IPR011761 ATP-grasp fold H5404_14585 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type H5404_14585 IPR013815 ATP-grasp fold, subdomain 1 H5404_14585 IPR016185 Pre-ATP-grasp domain superfamily H5404_14585 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase H5404_14590 IPR016192 APOBEC/CMP deaminase, zinc-binding H5404_14590 IPR002125 Cytidine and deoxycytidylate deaminase domain H5404_14590 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain H5404_14590 IPR016193 Cytidine deaminase-like H5404_14590 IPR020797 Cytidine deaminase, bacteria H5404_14590 IPR006263 Cytidine deaminase, homodimeric H5404_14595 IPR005261 Conserved hypothetical protein CHP00659 H5404_14595 IPR007300 CidB/LrgB family H5404_14600 IPR005538 LrgA/CidA family H5404_14600 IPR022957 Uncharacterised protein family UPF0299 H5404_14605 IPR036397 Ribonuclease H superfamily H5404_14605 IPR023607 Exodeoxyribonuclease I H5404_14605 IPR034748 Exonuclease I, C-terminal alpha-helical domain H5404_14605 IPR012337 Ribonuclease H-like superfamily H5404_14605 IPR013520 Exonuclease, RNase T/DNA polymerase III H5404_14605 IPR013620 Exodeoxyribonuclease I, C-terminal H5404_14605 IPR038649 Exonuclease I, SH3-like domain superfamily H5404_14605 IPR034747 Exonuclease I, SH3-like domain H5404_14610 IPR001991 Sodium:dicarboxylate symporter H5404_14610 IPR036458 Sodium:dicarboxylate symporter superfamily H5404_14615 IPR016040 NAD(P)-binding domain H5404_14615 IPR036291 NAD(P)-binding domain superfamily H5404_14615 IPR000534 Semialdehyde dehydrogenase, NAD-binding H5404_14620 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like H5404_14620 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal H5404_14620 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic H5404_14620 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily H5404_14625 IPR003805 Adenosylcobinamide-GDP ribazoletransferase H5404_14630 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase H5404_14630 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_14635 IPR013078 Histidine phosphatase superfamily, clade-1 H5404_14635 IPR029033 Histidine phosphatase superfamily H5404_14635 IPR004449 Phosphohistidine phosphatase SixA H5404_14645 IPR007036 Succinylglutamate desuccinylase/aspartoacylase H5404_14645 IPR016681 Succinylglutamate desuccinylase H5404_14650 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC H5404_14650 IPR037294 ABC transporter, BtuC-like H5404_14650 IPR000522 ABC transporter, permease protein, BtuC-like H5404_14655 IPR003593 AAA+ ATPase domain H5404_14655 IPR003439 ABC transporter-like H5404_14655 IPR023693 ABC transporter, vitamin B12, BtuD H5404_14655 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_14675 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_14675 IPR036390 Winged helix DNA-binding domain superfamily H5404_14675 IPR005119 LysR, substrate-binding H5404_14675 IPR000847 Transcription regulator HTH, LysR H5404_14695 IPR034709 Ribitol-5-phosphate cytidylyltransferase H5404_14695 IPR029044 Nucleotide-diphospho-sugar transferases H5404_14695 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site H5404_14695 IPR034683 Cytidylyltransferase IspD/TarI H5404_14700 IPR016040 NAD(P)-binding domain H5404_14700 IPR036291 NAD(P)-binding domain superfamily H5404_14705 IPR007074 LicD family H5404_14710 IPR002725 Protein of unknown function DUF45 H5404_14715 IPR016909 Ribosomal RNA large subunit methyltransferase F H5404_14715 IPR010286 METTL16/RlmF family H5404_14715 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_14735 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_14735 IPR036390 Winged helix DNA-binding domain superfamily H5404_14735 IPR008920 Transcription regulator FadR/GntR, C-terminal H5404_14735 IPR000524 Transcription regulator HTH, GntR H5404_14740 IPR016161 Aldehyde/histidinol dehydrogenase H5404_14740 IPR015590 Aldehyde dehydrogenase domain H5404_14740 IPR016162 Aldehyde dehydrogenase, N-terminal H5404_14740 IPR016163 Aldehyde dehydrogenase, C-terminal H5404_14745 IPR008794 Proline racemase family H5404_14750 IPR036188 FAD/NAD(P)-binding domain superfamily H5404_14750 IPR008471 MnmC-like methyltransferase H5404_14750 IPR006076 FAD dependent oxidoreductase H5404_14750 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC H5404_14750 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal H5404_14760 IPR023401 Ornithine cyclodeaminase, N-terminal H5404_14760 IPR003462 Ornithine cyclodeaminase/mu-crystallin H5404_14760 IPR036291 NAD(P)-binding domain superfamily H5404_14765 IPR020624 Schiff base-forming aldolase, conserved site H5404_14765 IPR020625 Schiff base-forming aldolase, active site H5404_14765 IPR002220 DapA-like H5404_14765 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA H5404_14765 IPR013785 Aldolase-type TIM barrel H5404_14770 IPR003439 ABC transporter-like H5404_14770 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA H5404_14770 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit H5404_14770 IPR003593 AAA+ ATPase domain H5404_14770 IPR017871 ABC transporter, conserved site H5404_14770 IPR008995 Molybdate/tungstate binding, C-terminal H5404_14770 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_14770 IPR013611 Transport-associated OB, type 2 H5404_14775 IPR035906 MetI-like superfamily H5404_14775 IPR000515 ABC transporter type 1, transmembrane domain MetI-like H5404_14780 IPR035906 MetI-like superfamily H5404_14780 IPR000515 ABC transporter type 1, transmembrane domain MetI-like H5404_14790 IPR035986 PKD domain superfamily H5404_14790 IPR002169 Peptidase M9A/M9B, collagenase, bacterial H5404_14790 IPR000601 PKD domain H5404_14790 IPR013661 Peptidase M9, collagenase, N-terminal domain H5404_14790 IPR013783 Immunoglobulin-like fold H5404_14790 IPR022409 PKD/Chitinase domain H5404_14800 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal H5404_14800 IPR017871 ABC transporter, conserved site H5404_14800 IPR003593 AAA+ ATPase domain H5404_14800 IPR003439 ABC transporter-like H5404_14800 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_14805 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal H5404_14805 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_14805 IPR003593 AAA+ ATPase domain H5404_14805 IPR017871 ABC transporter, conserved site H5404_14805 IPR003439 ABC transporter-like H5404_14810 IPR025966 Oligopeptide transport permease C-like, N-terminal domain H5404_14810 IPR000515 ABC transporter type 1, transmembrane domain MetI-like H5404_14810 IPR035906 MetI-like superfamily H5404_14815 IPR000515 ABC transporter type 1, transmembrane domain MetI-like H5404_14815 IPR035906 MetI-like superfamily H5404_14820 IPR039424 Solute-binding protein family 5 H5404_14820 IPR030678 Peptide/nickel binding protein, MppA-type H5404_14820 IPR000914 Solute-binding protein family 5 domain H5404_14820 IPR023765 Solute-binding protein family 5, conserved site H5404_14825 IPR010162 Peptidase M20B, peptidase T-like H5404_14825 IPR002933 Peptidase M20 H5404_14825 IPR011650 Peptidase M20, dimerisation domain H5404_14825 IPR008007 Peptidase M42 H5404_14825 IPR036264 Bacterial exopeptidase dimerisation domain H5404_14825 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site H5404_14830 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain H5404_14830 IPR041735 4-hydroxyphenylpyruvate dioxygenase, C-terminal H5404_14830 IPR005956 4-hydroxyphenylpyruvate dioxygenase H5404_14830 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase H5404_14830 IPR041736 4-hydroxyphenylpyruvate dioxygenase, N-terminal H5404_14830 IPR037523 Vicinal oxygen chelate (VOC) domain H5404_14835 IPR011051 RmlC-like cupin domain superfamily H5404_14835 IPR014710 RmlC-like jelly roll fold H5404_14835 IPR005708 Homogentisate 1,2-dioxygenase H5404_14845 IPR005955 Glutathione S-transferases, class Zeta H5404_14845 IPR034333 Glutathione S-transferases, class Zeta , N-terminal H5404_14845 IPR004045 Glutathione S-transferase, N-terminal H5404_14845 IPR040079 Glutathione Transferase family H5404_14845 IPR036249 Thioredoxin-like superfamily H5404_14845 IPR036282 Glutathione S-transferase, C-terminal domain superfamily H5404_14845 IPR010987 Glutathione S-transferase, C-terminal-like H5404_14845 IPR034330 Glutathione S-transferases, class Zeta , C-terminal H5404_14845 IPR004046 Glutathione S-transferase, C-terminal H5404_14890 IPR039562 Membrane fusion protein, biotin-lipoyl like domain H5404_14890 IPR006143 RND efflux pump, membrane fusion protein H5404_14890 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA H5404_14900 IPR030802 ABC transporter permease MalE H5404_14900 IPR003453 ABC transport permease subunit MlaE, Proteobacteria H5404_14905 IPR003593 AAA+ ATPase domain H5404_14905 IPR003439 ABC transporter-like H5404_14905 IPR017871 ABC transporter, conserved site H5404_14905 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl H5404_14905 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_14920 IPR023408 Mechanosensitive ion channel MscS domain superfamily H5404_14920 IPR010920 LSM domain superfamily H5404_14920 IPR025692 Mechanosensitive ion channel inner membrane domain 1 H5404_14920 IPR024393 Mechanosensitive ion channel MscS, porin domain H5404_14920 IPR011066 Mechanosensitive ion channel MscS, C-terminal H5404_14920 IPR006686 Mechanosensitive ion channel MscS, conserved site H5404_14920 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 H5404_14920 IPR006685 Mechanosensitive ion channel MscS H5404_14925 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site H5404_14925 IPR011650 Peptidase M20, dimerisation domain H5404_14925 IPR002933 Peptidase M20 H5404_14925 IPR036264 Bacterial exopeptidase dimerisation domain H5404_14925 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria H5404_14930 IPR023685 Pyridoxal kinase PdxY H5404_14930 IPR029056 Ribokinase-like H5404_14930 IPR004625 Pyridoxine kinase H5404_14930 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase H5404_14935 IPR036390 Winged helix DNA-binding domain superfamily H5404_14935 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_14935 IPR005119 LysR, substrate-binding H5404_14935 IPR000847 Transcription regulator HTH, LysR H5404_14955 IPR029033 Histidine phosphatase superfamily H5404_14955 IPR013078 Histidine phosphatase superfamily, clade-1 H5404_14955 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site H5404_14955 IPR023086 Phosphoglycerate mutase, GpmB, probable H5404_14970 IPR001898 Solute carrier family 13 H5404_14970 IPR031312 Sodium/sulphate symporter, conserved site H5404_14975 IPR004358 Signal transduction histidine kinase-related protein, C-terminal H5404_14975 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF H5404_14975 IPR003594 Histidine kinase/HSP90-like ATPase H5404_14975 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily H5404_14975 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_14975 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain H5404_14975 IPR005467 Histidine kinase domain H5404_14980 IPR001789 Signal transduction response regulator, receiver domain H5404_14980 IPR011006 CheY-like superfamily H5404_14980 IPR009057 Homeobox-like domain superfamily H5404_14980 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_14980 IPR002197 DNA binding HTH domain, Fis-type H5404_14980 IPR025944 Sigma-54 interaction domain, conserved site H5404_14980 IPR002078 RNA polymerase sigma factor 54 interaction domain H5404_14985 IPR001633 EAL domain H5404_14985 IPR029787 Nucleotide cyclase H5404_14985 IPR035965 PAS domain superfamily H5404_14985 IPR000160 GGDEF domain H5404_14985 IPR005330 MHYT domain H5404_14985 IPR035919 EAL domain superfamily H5404_14990 IPR006674 HD domain H5404_14990 IPR006675 HDIG domain H5404_14990 IPR037522 HD-GYP domain H5404_14990 IPR021812 Protein of unknown function DUF3391 H5404_14990 IPR003607 HD/PDEase domain H5404_14995 IPR004778 Homoserine/Threonine efflux protein H5404_14995 IPR001123 Amino acid exporter protein, LeuE-type H5404_15000 IPR016905 Glycyl radical enzyme, HI0521, predicted H5404_15005 IPR023912 Putative glycyl-radical enzyme activating enzyme YjjW H5404_15005 IPR007197 Radical SAM H5404_15005 IPR001989 Radical-activating enzyme, conserved site H5404_15005 IPR012839 Organic radical enzyme activase H5404_15005 IPR034457 Organic radical-activating enzymes H5404_15005 IPR013785 Aldolase-type TIM barrel H5404_15005 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site H5404_15005 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain H5404_15015 IPR005496 Integral membrane protein TerC H5404_15020 IPR016047 Peptidase M23 H5404_15020 IPR018392 LysM domain H5404_15020 IPR013731 Opacity-associated protein A, N-terminal H5404_15020 IPR011055 Duplicated hybrid motif H5404_15050 IPR002078 RNA polymerase sigma factor 54 interaction domain H5404_15050 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 H5404_15050 IPR001789 Signal transduction response regulator, receiver domain H5404_15050 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_15050 IPR009057 Homeobox-like domain superfamily H5404_15050 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 H5404_15050 IPR025944 Sigma-54 interaction domain, conserved site H5404_15050 IPR011006 CheY-like superfamily H5404_15050 IPR003593 AAA+ ATPase domain H5404_15050 IPR002197 DNA binding HTH domain, Fis-type H5404_15055 IPR003959 ATPase, AAA-type, core H5404_15055 IPR017729 Type VI secretion system, ATPase ClpV1 H5404_15055 IPR019489 Clp ATPase, C-terminal H5404_15055 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_15055 IPR003593 AAA+ ATPase domain H5404_15055 IPR004176 Clp, N-terminal H5404_15055 IPR036628 Clp, N-terminal domain superfamily H5404_15055 IPR041546 ClpA/ClpB, AAA lid domain H5404_15055 IPR018368 ClpA/B, conserved site 1 H5404_15055 IPR001270 ClpA/B family H5404_15060 IPR036624 Hcp1-like superfamily H5404_15060 IPR008514 Type VI secretion system effector, Hcp H5404_15065 IPR037026 Vgr protein, OB-fold domain superfamily H5404_15065 IPR006531 Gp5 N-terminal H5404_15065 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset H5404_15065 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein H5404_15090 IPR023507 Serine/threonine protein kinase PknD H5404_15090 IPR008271 Serine/threonine-protein kinase, active site H5404_15090 IPR017441 Protein kinase, ATP binding site H5404_15090 IPR000719 Protein kinase domain H5404_15090 IPR011009 Protein kinase-like domain superfamily H5404_15090 IPR011990 Tetratricopeptide-like helical domain superfamily H5404_15105 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath H5404_15115 IPR010272 Type VI secretion system, TssF-like H5404_15125 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain H5404_15125 IPR011991 ArsR-like helix-turn-helix domain H5404_15125 IPR000485 AsnC-type HTH domain H5404_15125 IPR019888 Transcription regulator AsnC-type H5404_15125 IPR011008 Dimeric alpha-beta barrel H5404_15125 IPR019885 Transcription regulator HTH, AsnC-type, conserved site H5404_15125 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_15125 IPR036390 Winged helix DNA-binding domain superfamily H5404_15155 IPR010263 Type VI secretion protein, VC_A0114 H5404_15235 IPR003607 HD/PDEase domain H5404_15235 IPR006674 HD domain H5404_15235 IPR037522 HD-GYP domain H5404_15235 IPR006675 HDIG domain H5404_15240 IPR039697 Iron-type alcohol dehydrogenase-like H5404_15240 IPR018211 Alcohol dehydrogenase, iron-type, conserved site H5404_15240 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA H5404_15245 IPR013061 Tryptophan/tryrosine permease, conserved site H5404_15245 IPR013059 Tryptophan/tyrosine transporter H5404_15245 IPR018227 Amino acid/polyamine transporter 2 H5404_15265 IPR017871 ABC transporter, conserved site H5404_15265 IPR003593 AAA+ ATPase domain H5404_15265 IPR011527 ABC transporter type 1, transmembrane domain H5404_15265 IPR039421 Type I protein exporter H5404_15265 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_15265 IPR036640 ABC transporter type 1, transmembrane domain superfamily H5404_15265 IPR003439 ABC transporter-like H5404_15270 IPR036640 ABC transporter type 1, transmembrane domain superfamily H5404_15270 IPR011527 ABC transporter type 1, transmembrane domain H5404_15270 IPR003593 AAA+ ATPase domain H5404_15270 IPR039421 Type I protein exporter H5404_15270 IPR003439 ABC transporter-like H5404_15270 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_15270 IPR017871 ABC transporter, conserved site H5404_15295 IPR018181 Heat shock protein 70, conserved site H5404_15295 IPR012725 Chaperone DnaK H5404_15295 IPR013126 Heat shock protein 70 family H5404_15295 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily H5404_15295 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily H5404_15300 IPR013126 Heat shock protein 70 family H5404_15300 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily H5404_15300 IPR018181 Heat shock protein 70, conserved site H5404_15300 IPR012725 Chaperone DnaK H5404_15300 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily H5404_15310 IPR000160 GGDEF domain H5404_15310 IPR033424 Membrane-associated sensor domain H5404_15310 IPR029787 Nucleotide cyclase H5404_15340 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE H5404_15340 IPR009010 Aspartate decarboxylase-like domain superfamily H5404_15340 IPR006657 Molybdopterin dinucleotide-binding domain H5404_15340 IPR006656 Molybdopterin oxidoreductase H5404_15340 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain H5404_15340 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site H5404_15340 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site H5404_15340 IPR006311 Twin-arginine translocation pathway, signal sequence H5404_15340 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal H5404_15345 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain H5404_15345 IPR014297 Dimethylsulphoxide reductase, chain B H5404_15345 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site H5404_15350 IPR007059 DMSO reductase anchor subunit (DmsC) H5404_15355 IPR036411 TorD-like superfamily H5404_15355 IPR020945 DMSO/Nitrate reductase chaperone H5404_15355 IPR028611 Tat proofreading chaperone DmsD H5404_15355 IPR026269 Tat proofreading chaperone DmsD-type H5404_15365 IPR023048 NADH-azoreductase, FMN-dependent H5404_15365 IPR029039 Flavoprotein-like superfamily H5404_15365 IPR003680 Flavodoxin-like fold H5404_15370 IPR003593 AAA+ ATPase domain H5404_15370 IPR011545 DEAD/DEAH box helicase domain H5404_15370 IPR011709 Domain of unknown function DUF1605 H5404_15370 IPR007502 Helicase-associated domain H5404_15370 IPR014001 Helicase superfamily 1/2, ATP-binding domain H5404_15370 IPR001650 Helicase, C-terminal H5404_15370 IPR024590 RNA helicase HrpA, C-terminal H5404_15370 IPR010222 RNA helicase HrpA H5404_15370 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_15385 IPR000060 BCCT transporter family H5404_15385 IPR018093 BCCT transporter, conserved site H5404_15395 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase H5404_15395 IPR003362 Bacterial sugar transferase H5404_15400 IPR001173 Glycosyltransferase 2-like H5404_15400 IPR029044 Nucleotide-diphospho-sugar transferases H5404_15400 IPR023853 Poly-beta-1,6 N-acetyl-D-glucosamine synthase PgaC/IcaA H5404_15405 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA H5404_15405 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain H5404_15405 IPR001296 Glycosyl transferase, family 1 H5404_15435 IPR001296 Glycosyl transferase, family 1 H5404_15435 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain H5404_15440 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain H5404_15440 IPR001296 Glycosyl transferase, family 1 H5404_15445 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_15445 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 H5404_15445 IPR002078 RNA polymerase sigma factor 54 interaction domain H5404_15445 IPR025944 Sigma-54 interaction domain, conserved site H5404_15445 IPR001789 Signal transduction response regulator, receiver domain H5404_15445 IPR003593 AAA+ ATPase domain H5404_15445 IPR011006 CheY-like superfamily H5404_15445 IPR009057 Homeobox-like domain superfamily H5404_15445 IPR002197 DNA binding HTH domain, Fis-type H5404_15460 IPR003715 Polysaccharide export protein H5404_15460 IPR019554 Soluble ligand binding domain H5404_15470 IPR002645 STAS domain H5404_15470 IPR036513 STAS domain superfamily H5404_15470 IPR003658 Anti-sigma factor antagonist H5404_15470 IPR014237 Anti-sigma F factor antagonist H5404_15475 IPR012340 Nucleic acid-binding, OB-fold H5404_15475 IPR016059 DNA ligase, ATP-dependent, conserved site H5404_15475 IPR012310 DNA ligase, ATP-dependent, central H5404_15475 IPR029319 DNA ligase, OB-like domain H5404_15485 IPR002528 Multi antimicrobial extrusion protein H5404_15490 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily H5404_15490 IPR001783 Lumazine-binding protein H5404_15490 IPR017938 Riboflavin synthase-like beta-barrel H5404_15490 IPR026017 Lumazine-binding domain H5404_15500 IPR016477 Fructosamine/Ketosamine-3-kinase H5404_15500 IPR011009 Protein kinase-like domain superfamily H5404_15505 IPR001789 Signal transduction response regulator, receiver domain H5404_15505 IPR011006 CheY-like superfamily H5404_15505 IPR035909 Methylesterase CheB, C-terminal H5404_15505 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type H5404_15505 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase H5404_15510 IPR007894 MASE2 H5404_15510 IPR029787 Nucleotide cyclase H5404_15510 IPR000160 GGDEF domain H5404_15520 IPR000064 Endopeptidase, NLPC/P60 domain H5404_15520 IPR038765 Papain-like cysteine peptidase superfamily H5404_15525 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain H5404_15525 IPR033463 Single cache domain 3 H5404_15525 IPR003660 HAMP domain H5404_15525 IPR029151 Periplasmic sensor-like domain superfamily H5404_15525 IPR004090 Chemotaxis methyl-accepting receptor H5404_15560 IPR005636 DTW H5404_15560 IPR039262 DTW domain-containing protein 2 H5404_15565 IPR023505 N-acetyl-D-glucosamine kinase H5404_15565 IPR000600 ROK family H5404_15575 IPR005110 MoeA, N-terminal and linker domain H5404_15575 IPR036135 MoeA, N-terminal and linker domain superfamily H5404_15575 IPR036688 MoeA, C-terminal, domain IV superfamily H5404_15575 IPR001453 MoaB/Mog domain H5404_15575 IPR038987 Molybdopterin biosynthesis protein MoeA-like H5404_15575 IPR005111 MoeA, C-terminal, domain IV H5404_15575 IPR008284 Molybdenum cofactor biosynthesis, conserved site H5404_15575 IPR036425 MoaB/Mog-like domain superfamily H5404_15580 IPR025877 MobA-like NTP transferase H5404_15580 IPR013482 Molybdenum cofactor guanylyltransferase H5404_15580 IPR029044 Nucleotide-diphospho-sugar transferases H5404_15585 IPR008995 Molybdate/tungstate binding, C-terminal H5404_15585 IPR013611 Transport-associated OB, type 2 H5404_15585 IPR003439 ABC transporter-like H5404_15585 IPR017871 ABC transporter, conserved site H5404_15585 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_15585 IPR003593 AAA+ ATPase domain H5404_15585 IPR015853 ABC transporter, ferric cation import, FbpC H5404_15590 IPR035906 MetI-like superfamily H5404_15590 IPR000515 ABC transporter type 1, transmembrane domain MetI-like H5404_15595 IPR024370 PBP domain H5404_15600 IPR025944 Sigma-54 interaction domain, conserved site H5404_15600 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 H5404_15600 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 H5404_15600 IPR009057 Homeobox-like domain superfamily H5404_15600 IPR002078 RNA polymerase sigma factor 54 interaction domain H5404_15600 IPR001789 Signal transduction response regulator, receiver domain H5404_15600 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_15600 IPR002197 DNA binding HTH domain, Fis-type H5404_15600 IPR003593 AAA+ ATPase domain H5404_15600 IPR011006 CheY-like superfamily H5404_15605 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain H5404_15605 IPR004358 Signal transduction histidine kinase-related protein, C-terminal H5404_15605 IPR005467 Histidine kinase domain H5404_15605 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily H5404_15605 IPR003594 Histidine kinase/HSP90-like ATPase H5404_15605 IPR029151 Periplasmic sensor-like domain superfamily H5404_15605 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_15610 IPR003593 AAA+ ATPase domain H5404_15610 IPR032781 ABC-transporter extension domain H5404_15610 IPR003439 ABC transporter-like H5404_15610 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_15615 IPR016193 Cytidine deaminase-like H5404_15615 IPR003786 Sulfur carrier protein FdhD H5404_15635 IPR020945 DMSO/Nitrate reductase chaperone H5404_15635 IPR036386 HscB, C-terminal domain superfamily H5404_15635 IPR023069 Chaperone TorD H5404_15635 IPR036411 TorD-like superfamily H5404_15645 IPR006311 Twin-arginine translocation pathway, signal sequence H5404_15645 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site H5404_15645 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site H5404_15645 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain H5404_15645 IPR006656 Molybdopterin oxidoreductase H5404_15645 IPR006657 Molybdopterin dinucleotide-binding domain H5404_15645 IPR006443 Formate dehydrogenase-N, alpha subunit H5404_15645 IPR009010 Aspartate decarboxylase-like domain superfamily H5404_15650 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site H5404_15650 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain H5404_15650 IPR000813 7Fe ferredoxin H5404_15665 IPR006530 YD repeat H5404_15665 IPR031325 RHS repeat H5404_15665 IPR022385 Rhs repeat-associated core H5404_15665 IPR001826 RHS protein H5404_15675 IPR001905 Ammonium transporter H5404_15675 IPR018047 Ammonium transporter, conserved site H5404_15675 IPR024041 Ammonium transporter AmtB-like domain H5404_15675 IPR029020 Ammonium/urea transporter H5404_15685 IPR029035 DHS-like NAD/FAD-binding domain superfamily H5404_15685 IPR003000 Sirtuin family H5404_15685 IPR026590 Sirtuin family, catalytic core domain H5404_15685 IPR026591 Sirtuin, catalytic core small domain superfamily H5404_15685 IPR027546 Sirtuin, class III H5404_15690 IPR006059 Bacterial extracellular solute-binding protein H5404_15690 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein H5404_15695 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein H5404_15695 IPR006059 Bacterial extracellular solute-binding protein H5404_15700 IPR035906 MetI-like superfamily H5404_15700 IPR000515 ABC transporter type 1, transmembrane domain MetI-like H5404_15705 IPR035906 MetI-like superfamily H5404_15705 IPR000515 ABC transporter type 1, transmembrane domain MetI-like H5404_15710 IPR017871 ABC transporter, conserved site H5404_15710 IPR003439 ABC transporter-like H5404_15710 IPR017879 ABC transporter, spermidine/putrescine import ATP-binding protein, PotA H5404_15710 IPR008995 Molybdate/tungstate binding, C-terminal H5404_15710 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_15710 IPR003593 AAA+ ATPase domain H5404_15710 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit H5404_15710 IPR013611 Transport-associated OB, type 2 H5404_15730 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold H5404_15730 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal H5404_15730 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase H5404_15730 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type H5404_15735 IPR006016 UspA H5404_15740 IPR014710 RmlC-like jelly roll fold H5404_15740 IPR012318 Crp-type HTH domain H5404_15740 IPR000595 Cyclic nucleotide-binding domain H5404_15740 IPR018335 Transcription regulator HTH, Crp-type, conserved site H5404_15740 IPR036390 Winged helix DNA-binding domain superfamily H5404_15740 IPR018490 Cyclic nucleotide-binding-like H5404_15740 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_15755 IPR023299 P-type ATPase, cytoplasmic domain N H5404_15755 IPR018303 P-type ATPase, phosphorylation site H5404_15755 IPR006121 Heavy metal-associated domain, HMA H5404_15755 IPR017969 Heavy-metal-associated, conserved site H5404_15755 IPR027256 P-type ATPase, subfamily IB H5404_15755 IPR008250 P-type ATPase, A domain superfamily H5404_15755 IPR001757 P-type ATPase H5404_15755 IPR023214 HAD superfamily H5404_15755 IPR036412 HAD-like superfamily H5404_15755 IPR036163 Heavy metal-associated domain superfamily H5404_15755 IPR023298 P-type ATPase, transmembrane domain superfamily H5404_15765 IPR004678 Cytochrome c oxidase cbb3-type, subunit III H5404_15765 IPR008168 Cytochrome c, class IC H5404_15765 IPR036909 Cytochrome c-like domain superfamily H5404_15765 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal H5404_15765 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily H5404_15765 IPR009056 Cytochrome c-like domain H5404_15780 IPR000883 Cytochrome c oxidase subunit I H5404_15780 IPR023616 Cytochrome c oxidase-like, subunit I domain H5404_15780 IPR036927 Cytochrome c oxidase-like, subunit I superfamily H5404_15780 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site H5404_15780 IPR004677 Cytochrome c oxidase cbb3-type, subunit I H5404_15795 IPR029151 Periplasmic sensor-like domain superfamily H5404_15795 IPR001789 Signal transduction response regulator, receiver domain H5404_15795 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain H5404_15795 IPR011006 CheY-like superfamily H5404_15795 IPR003594 Histidine kinase/HSP90-like ATPase H5404_15795 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_15795 IPR005467 Histidine kinase domain H5404_15795 IPR004358 Signal transduction histidine kinase-related protein, C-terminal H5404_15795 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily H5404_15795 IPR015387 LuxQ, periplasmic H5404_15795 IPR035965 PAS domain superfamily H5404_15815 IPR013321 Arc-type ribbon-helix-helix H5404_15815 IPR009390 Macrodomain Ter protein, MatP H5404_15815 IPR038339 MatP, N-terminal domain superfamily H5404_15815 IPR035087 MatP, N-terminal H5404_15815 IPR035375 MatP, C-terminal ribbon-helix-helix domain H5404_15820 IPR008269 Peptidase S16, Lon proteolytic domain H5404_15820 IPR027065 Lon protease H5404_15820 IPR020568 Ribosomal protein S5 domain 2-type fold H5404_15820 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup H5404_15820 IPR041699 Lon protease, AAA domain H5404_15825 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ H5404_15825 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA H5404_15825 IPR029069 HotDog domain superfamily H5404_15830 IPR023200 Ribosome modulation factor domain superfamily H5404_15830 IPR007040 Ribosome modulation factor H5404_15840 IPR003439 ABC transporter-like H5404_15840 IPR003593 AAA+ ATPase domain H5404_15840 IPR032524 ABC transporter Uup, C-terminal H5404_15840 IPR032781 ABC-transporter extension domain H5404_15840 IPR017871 ABC transporter, conserved site H5404_15840 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_15840 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily H5404_15850 IPR002052 DNA methylase, N-6 adenine-specific, conserved site H5404_15850 IPR000241 Putative RNA methylase domain H5404_15850 IPR019614 S-adenosylmethionine-dependent methyltransferase H5404_15850 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_15850 IPR017244 Ribosomal RNA large subunit methyltransferase K/L H5404_15850 IPR004114 THUMP domain H5404_15855 IPR009809 Cell division protein ZapC H5404_15860 IPR005720 Dihydroorotate dehydrogenase domain H5404_15860 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 H5404_15860 IPR005719 Dihydroorotate dehydrogenase, class 2 H5404_15860 IPR001295 Dihydroorotate dehydrogenase, conserved site H5404_15860 IPR013785 Aldolase-type TIM barrel H5404_15865 IPR007780 NAD-glutamate dehydrogenase, bacteria H5404_15865 IPR036291 NAD(P)-binding domain superfamily H5404_15865 IPR028971 NAD-glutamate dehydrogenase H5404_15875 IPR012779 Peptidase M1, alanyl aminopeptidase H5404_15875 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal H5404_15875 IPR027268 Peptidase M4/M1, CTD superfamily H5404_15875 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily H5404_15875 IPR001930 Peptidase M1, alanine aminopeptidase/leukotriene A4 hydrolase H5404_15875 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily H5404_15875 IPR042097 Aminopeptidase N-like , N-terminal H5404_15875 IPR014782 Peptidase M1, membrane alanine aminopeptidase H5404_15875 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold H5404_15885 IPR004447 C-terminal-processing peptidase S41A H5404_15885 IPR036034 PDZ superfamily H5404_15885 IPR005151 Tail specific protease H5404_15885 IPR029045 ClpP/crotonase-like domain superfamily H5404_15885 IPR020992 Tail specific protease, C-terminal H5404_15885 IPR001478 PDZ domain H5404_15885 IPR040573 Tail specific protease, N-terminal domain H5404_15890 IPR023529 RNA chaperone ProQ H5404_15890 IPR016103 ProQ/FinO domain H5404_15890 IPR036442 ProQ/FinO domain superfamily H5404_15890 IPR035236 RNA chaperone ProQ, C-terminal H5404_15895 IPR000614 Free Met sulfoxide reductase conserved site H5404_15895 IPR029016 GAF-like domain superfamily H5404_15895 IPR003018 GAF domain H5404_15900 IPR003439 ABC transporter-like H5404_15900 IPR036640 ABC transporter type 1, transmembrane domain superfamily H5404_15900 IPR039421 Type I protein exporter H5404_15900 IPR003593 AAA+ ATPase domain H5404_15900 IPR017871 ABC transporter, conserved site H5404_15900 IPR011527 ABC transporter type 1, transmembrane domain H5404_15900 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_15905 IPR011031 Multihaem cytochrome H5404_15905 IPR007498 Intermembrane transport protein PqiA-like H5404_15905 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type H5404_15910 IPR003399 Mce/MlaD H5404_15915 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_15915 IPR023545 rRNA small subunit methyltransferase F H5404_15915 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site H5404_15915 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal H5404_15915 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type H5404_15915 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain H5404_15915 IPR011023 Nop2p H5404_15915 IPR023267 RNA (C5-cytosine) methyltransferase H5404_15935 IPR006218 DAHP synthetase I/KDSA H5404_15935 IPR013785 Aldolase-type TIM barrel H5404_15935 IPR006219 DHAP synthase, class 1 H5404_15940 IPR035571 UPF0234-like, C-terminal H5404_15940 IPR007551 Protein of unknown function DUF520 H5404_15940 IPR035570 UPF0234, N-terminal H5404_15940 IPR036183 YajQ-like superfamily H5404_15945 IPR037115 Sirohaem synthase, dimerisation domain superfamily H5404_15945 IPR012409 Sirohaem synthase H5404_15945 IPR014777 Tetrapyrrole methylase, subdomain 1 H5404_15945 IPR014776 Tetrapyrrole methylase, subdomain 2 H5404_15945 IPR028281 Siroheme synthase, central domain H5404_15945 IPR006367 Sirohaem synthase, N-terminal H5404_15945 IPR036291 NAD(P)-binding domain superfamily H5404_15945 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site H5404_15945 IPR019478 Sirohaem synthase, dimerisation domain H5404_15945 IPR006366 Uroporphyrin-III C-methyltransferase H5404_15945 IPR035996 Tetrapyrrole methylase superfamily H5404_15945 IPR000878 Tetrapyrrole methylase H5404_15950 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter H5404_15950 IPR018313 Solute-binding protein family 3, conserved site H5404_15950 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF H5404_15955 IPR035906 MetI-like superfamily H5404_15955 IPR000515 ABC transporter type 1, transmembrane domain MetI-like H5404_15955 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain H5404_15960 IPR035906 MetI-like superfamily H5404_15960 IPR000515 ABC transporter type 1, transmembrane domain MetI-like H5404_15960 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain H5404_15965 IPR003593 AAA+ ATPase domain H5404_15965 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type H5404_15965 IPR017871 ABC transporter, conserved site H5404_15965 IPR003439 ABC transporter-like H5404_15965 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_15970 IPR006214 Bax inhibitor 1-related H5404_15980 IPR007453 Sulphur transfer protein DsrC/TusE H5404_15980 IPR042072 DsrC-like protein, C-terminal domain H5404_15980 IPR025526 DsrC-like domain superfamily H5404_15985 IPR017968 Acylphosphatase, conserved site H5404_15985 IPR036046 Acylphosphatase-like domain superfamily H5404_15985 IPR001792 Acylphosphatase-like domain H5404_15985 IPR020456 Acylphosphatase H5404_15990 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain H5404_15990 IPR029151 Periplasmic sensor-like domain superfamily H5404_15990 IPR033479 Double Cache domain 1 H5404_15990 IPR003660 HAMP domain H5404_15995 IPR002478 PUA domain H5404_15995 IPR015947 PUA-like superfamily H5404_15995 IPR036974 PUA domain superfamily H5404_15995 IPR041532 RlmI, PUA-like domain H5404_15995 IPR023542 rRNA large subunit methyltransferase I H5404_15995 IPR019614 S-adenosylmethionine-dependent methyltransferase H5404_15995 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_16010 IPR028974 TSP type-3 repeat H5404_16010 IPR036737 OmpA-like domain superfamily H5404_16010 IPR006690 Outer membrane protein, OmpA-like, conserved site H5404_16010 IPR006665 OmpA-like domain H5404_16010 IPR006664 Outer membrane protein, bacterial H5404_16010 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel H5404_16010 IPR008722 Outer membrane porin F, N-terminal H5404_16025 IPR028974 TSP type-3 repeat H5404_16025 IPR008722 Outer membrane porin F, N-terminal H5404_16025 IPR006690 Outer membrane protein, OmpA-like, conserved site H5404_16025 IPR036737 OmpA-like domain superfamily H5404_16025 IPR006664 Outer membrane protein, bacterial H5404_16025 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel H5404_16025 IPR006665 OmpA-like domain H5404_16035 IPR029787 Nucleotide cyclase H5404_16035 IPR000160 GGDEF domain H5404_16035 IPR033424 Membrane-associated sensor domain H5404_16040 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold H5404_16040 IPR018317 Queuosine biosynthesis protein QueC H5404_16045 IPR007197 Radical SAM H5404_16045 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria H5404_16045 IPR013785 Aldolase-type TIM barrel H5404_16045 IPR024924 7-carboxy-7-deazaguanine synthase-like H5404_16050 IPR023214 HAD superfamily H5404_16050 IPR036412 HAD-like superfamily H5404_16050 IPR000150 Cof family H5404_16050 IPR006379 HAD-superfamily hydrolase, subfamily IIB H5404_16060 IPR033116 Serine proteases, trypsin family, serine active site H5404_16060 IPR018114 Serine proteases, trypsin family, histidine active site H5404_16060 IPR001254 Serine proteases, trypsin domain H5404_16060 IPR001314 Peptidase S1A, chymotrypsin family H5404_16060 IPR009003 Peptidase S1, PA clan H5404_16065 IPR023072 Acetyltransferase, YpeA H5404_16065 IPR016181 Acyl-CoA N-acyltransferase H5404_16065 IPR000182 GNAT domain H5404_16070 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain H5404_16070 IPR025110 AMP-binding enzyme, C-terminal domain H5404_16070 IPR020845 AMP-binding, conserved site H5404_16070 IPR000873 AMP-dependent synthetase/ligase H5404_16070 IPR042099 AMP-dependent synthetase-like superfamily H5404_16075 IPR012709 2-methyl-aconitate isomerase PrpF H5404_16075 IPR007400 PrpF protein H5404_16080 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain H5404_16080 IPR036008 Aconitase, iron-sulfur domain H5404_16080 IPR006249 Aconitase/Iron-responsive element-binding protein 2 H5404_16080 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel H5404_16080 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent H5404_16080 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 H5404_16080 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain H5404_16085 IPR011278 2-methylcitrate synthase/citrate synthase type I H5404_16085 IPR024176 Citrate synthase, bacterial-type H5404_16085 IPR019810 Citrate synthase active site H5404_16085 IPR016142 Citrate synthase-like, large alpha subdomain H5404_16085 IPR016143 Citrate synthase-like, small alpha subdomain H5404_16085 IPR002020 Citrate synthase H5404_16085 IPR036969 Citrate synthase superfamily H5404_16090 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily H5404_16090 IPR012695 2-methylisocitrate lyase H5404_16090 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site H5404_16090 IPR039556 ICL/PEPM domain H5404_16090 IPR040442 Pyruvate kinase-like domain superfamily H5404_16115 IPR002823 Protein of unknown function DUF112, transmembrane H5404_16120 IPR002781 Transmembrane protein TauE-like H5404_16130 IPR008898 YopD-like H5404_16140 IPR011990 Tetratricopeptide-like helical domain superfamily H5404_16140 IPR005415 Type III secretion system, low calcium response, chaperone LcrH/SycD H5404_16140 IPR016379 Type III secretion system, low calcium response, chaperone LcrH/SycD, subgroup H5404_16140 IPR011716 Tetratricopeptide TPR-3 H5404_16140 IPR013026 Tetratricopeptide repeat-containing domain H5404_16145 IPR005413 Low calcium response V antigen H5404_16145 IPR036139 Virulence-associated V antigen superfamily H5404_16150 IPR009863 Type III secretion protein, LcrG H5404_16155 IPR022797 Type III secretion system regulator LcrR/Chaperone CesD2 H5404_16155 IPR013405 Type III secretion system regulator, LcrR H5404_16160 IPR006302 Type III secretion protein HrcV H5404_16160 IPR042194 FHIPEP, domain 1 H5404_16160 IPR042193 FHIPEP, domain 3 H5404_16160 IPR042196 FHIPEP, domain 4 H5404_16160 IPR025505 FHIPEP conserved site H5404_16160 IPR001712 Type III secretion system FHIPEP H5404_16180 IPR015144 Type III secretion system effector delivery regulator TyeA H5404_16180 IPR013351 Type III secretion system effector delivery regulator TyeA-related H5404_16180 IPR038347 TyeA superfamily H5404_16185 IPR013401 Type III secretion regulator, YopN/LcrE/InvE/MxiC H5404_16185 IPR010812 Hypersensitivity response secretion-like, HrpJ H5404_16190 IPR003593 AAA+ ATPase domain H5404_16190 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site H5404_16190 IPR013380 ATPase, type III secretion system, H+-transporting H5404_16190 IPR040627 T3SS EscN ATPase, C-terminal H5404_16190 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_16190 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain H5404_16190 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain H5404_16190 IPR005714 ATPase, type III secretion system, FliI/YscN H5404_16205 IPR013385 Type III secretion system apparatus protein YscQ/HrcQ/SpaO H5404_16205 IPR003283 Type III secretion system outer membrane, SpaO H5404_16205 IPR036429 SpoA-like superfamily H5404_16205 IPR001543 Surface presentation of antigen (SpoA) H5404_16210 IPR005838 Type III secretion system inner membrane P protein H5404_16210 IPR005773 Yop virulence translocation protein R H5404_16215 IPR006306 Type III secretion protein HrpO H5404_16215 IPR002191 Bacterial export protein family 3 H5404_16220 IPR002010 Type III secretion system inner membrane R protein H5404_16220 IPR006304 Type III secretion protein SpaR/YscT H5404_16225 IPR006135 Type III secretion system substrate exporter H5404_16225 IPR029025 Type III secretion system substrate exporter, C-terminal H5404_16225 IPR006307 Type III exporter system, secretion apparatus protein BsaZ H5404_16230 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_16230 IPR000847 Transcription regulator HTH, LysR H5404_16230 IPR005119 LysR, substrate-binding H5404_16230 IPR036390 Winged helix DNA-binding domain superfamily H5404_16235 IPR022742 Serine aminopeptidase, S33 H5404_16235 IPR029058 Alpha/Beta hydrolase fold H5404_16240 IPR022742 Serine aminopeptidase, S33 H5404_16240 IPR029058 Alpha/Beta hydrolase fold H5404_16270 IPR003812 Fido domain H5404_16270 IPR036597 Fido-like domain superfamily H5404_16280 IPR012842 Type III secretion system HrpE/YscL H5404_16280 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE H5404_16290 IPR006182 Secretory protein YscJ/FliF H5404_16290 IPR003282 Type III secretion system lipoprotein HrcJ/YscJ H5404_16295 IPR012670 Type III secretion system, YscI/HrpB H5404_16305 IPR013348 Type III secretion system YscG H5404_16305 IPR011990 Tetratricopeptide-like helical domain superfamily H5404_16310 IPR011841 Type III secretion system, needle protein H5404_16310 IPR021123 Type III secretion, needle-protein-like H5404_16310 IPR037203 Type III secretion, needle-protein-like superfamily H5404_16320 IPR032034 Yop protein translocation protein D, periplasmic domain H5404_16320 IPR032030 YscD, cytoplasmic domain H5404_16320 IPR012843 Type III secretion system YscD/HrpQ H5404_16320 IPR000253 Forkhead-associated (FHA) domain H5404_16320 IPR008984 SMAD/FHA domain superfamily H5404_16325 IPR005644 NolW-like H5404_16325 IPR038591 NolW-like superfamily H5404_16325 IPR004846 Type II/III secretion system H5404_16325 IPR004845 Type II secretion system GspD, conserved site H5404_16325 IPR003522 Type III secretion system outer membrane pore YscC/HrcC H5404_16340 IPR020449 Transcription regulator HTH, AraC- type H5404_16340 IPR018062 HTH domain AraC-type, conserved site H5404_16340 IPR009057 Homeobox-like domain superfamily H5404_16340 IPR014710 RmlC-like jelly roll fold H5404_16340 IPR018060 DNA binding HTH domain, AraC-type H5404_16360 IPR015590 Aldehyde dehydrogenase domain H5404_16360 IPR029510 Aldehyde dehydrogenase, glutamic acid active site H5404_16360 IPR016160 Aldehyde dehydrogenase, cysteine active site H5404_16360 IPR016163 Aldehyde dehydrogenase, C-terminal H5404_16360 IPR016161 Aldehyde/histidinol dehydrogenase H5404_16360 IPR016162 Aldehyde dehydrogenase, N-terminal H5404_16365 IPR003593 AAA+ ATPase domain H5404_16365 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 H5404_16365 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 H5404_16365 IPR002078 RNA polymerase sigma factor 54 interaction domain H5404_16365 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_16365 IPR002197 DNA binding HTH domain, Fis-type H5404_16365 IPR029016 GAF-like domain superfamily H5404_16365 IPR009057 Homeobox-like domain superfamily H5404_16365 IPR025944 Sigma-54 interaction domain, conserved site H5404_16365 IPR003018 GAF domain H5404_16380 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding H5404_16380 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating H5404_16380 IPR013328 6-phosphogluconate dehydrogenase, domain 2 H5404_16380 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily H5404_16380 IPR006184 6-phosphogluconate-binding site H5404_16380 IPR036291 NAD(P)-binding domain superfamily H5404_16380 IPR006114 6-phosphogluconate dehydrogenase, C-terminal H5404_16380 IPR006183 6-phosphogluconate dehydrogenase H5404_16385 IPR039104 6-Phosphogluconolactonase H5404_16385 IPR005900 6-phosphogluconolactonase, DevB-type H5404_16385 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase H5404_16385 IPR037171 NagB/RpiA transferase-like H5404_16390 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding H5404_16390 IPR019796 Glucose-6-phosphate dehydrogenase, active site H5404_16390 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal H5404_16390 IPR036291 NAD(P)-binding domain superfamily H5404_16390 IPR001282 Glucose-6-phosphate dehydrogenase H5404_16395 IPR028141 Transcriptional regulator H5404_16395 IPR001789 Signal transduction response regulator, receiver domain H5404_16395 IPR024187 Signal transduction response regulator, citrate/malate metabolism H5404_16395 IPR011006 CheY-like superfamily H5404_16400 IPR033463 Single cache domain 3 H5404_16400 IPR013767 PAS fold H5404_16400 IPR005467 Histidine kinase domain H5404_16400 IPR029151 Periplasmic sensor-like domain superfamily H5404_16400 IPR004358 Signal transduction histidine kinase-related protein, C-terminal H5404_16400 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB H5404_16400 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_16400 IPR003594 Histidine kinase/HSP90-like ATPase H5404_16400 IPR035965 PAS domain superfamily H5404_16400 IPR039506 SpoOB, alpha-helical domain H5404_16400 IPR000014 PAS domain H5404_16415 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain H5404_16430 IPR036909 Cytochrome c-like domain superfamily H5404_16430 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase H5404_16430 IPR009056 Cytochrome c-like domain H5404_16430 IPR004852 Di-haem cytochrome c peroxidase H5404_16435 IPR027795 CASTOR, ACT domain H5404_16435 IPR001048 Aspartate/glutamate/uridylate kinase H5404_16435 IPR036393 Acetylglutamate kinase-like superfamily H5404_16440 IPR014710 RmlC-like jelly roll fold H5404_16440 IPR010462 Ectoine synthase H5404_16440 IPR011051 RmlC-like cupin domain superfamily H5404_16445 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 H5404_16445 IPR015421 Pyridoxal phosphate-dependent transferase, major domain H5404_16445 IPR004637 2,4-diaminobutyrate 4-transaminase H5404_16445 IPR005814 Aminotransferase class-III H5404_16445 IPR015424 Pyridoxal phosphate-dependent transferase H5404_16445 IPR012773 Ectoine biosynthetic protein H5404_16450 IPR016181 Acyl-CoA N-acyltransferase H5404_16450 IPR012772 L-2,4-diaminobutyric acid acetyltransferase H5404_16450 IPR000182 GNAT domain H5404_16455 IPR000060 BCCT transporter family H5404_16470 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_16470 IPR005892 Glycine betaine transport ATP-binding subunit H5404_16470 IPR017871 ABC transporter, conserved site H5404_16470 IPR000644 CBS domain H5404_16470 IPR003439 ABC transporter-like H5404_16470 IPR003593 AAA+ ATPase domain H5404_16475 IPR035906 MetI-like superfamily H5404_16475 IPR000515 ABC transporter type 1, transmembrane domain MetI-like H5404_16480 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain H5404_16490 IPR042099 AMP-dependent synthetase-like superfamily H5404_16490 IPR000873 AMP-dependent synthetase/ligase H5404_16490 IPR020845 AMP-binding, conserved site H5404_16500 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase H5404_16500 IPR036291 NAD(P)-binding domain superfamily H5404_16500 IPR002347 Short-chain dehydrogenase/reductase SDR H5404_16500 IPR020904 Short-chain dehydrogenase/reductase, conserved site H5404_16510 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_16510 IPR039420 Transcriptional regulatory protein WalR-like H5404_16510 IPR001867 OmpR/PhoB-type DNA-binding domain H5404_16510 IPR001789 Signal transduction response regulator, receiver domain H5404_16510 IPR011006 CheY-like superfamily H5404_16515 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain H5404_16515 IPR005467 Histidine kinase domain H5404_16515 IPR004358 Signal transduction histidine kinase-related protein, C-terminal H5404_16515 IPR013727 Two-component sensor kinase, N-terminal H5404_16515 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily H5404_16515 IPR003594 Histidine kinase/HSP90-like ATPase H5404_16515 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_16520 IPR017850 Alkaline-phosphatase-like, core domain superfamily H5404_16520 IPR012160 Lipoteichoic acid synthase-like H5404_16520 IPR000917 Sulfatase, N-terminal H5404_16545 IPR001463 Sodium:alanine symporter H5404_16555 IPR001123 Amino acid exporter protein, LeuE-type H5404_16560 IPR001333 Peptidase M32, carboxypeptidase Taq H5404_16565 IPR017508 HipA, N-terminal subdomain 1 H5404_16565 IPR012893 HipA-like, C-terminal H5404_16570 IPR042174 DNA-binding RecF, domain 2 H5404_16570 IPR003395 RecF/RecN/SMC, N-terminal H5404_16570 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_16570 IPR018078 DNA-binding, RecF, conserved site H5404_16570 IPR001238 DNA-binding, RecF H5404_16580 IPR001207 Transposase, mutator type H5404_16615 IPR006203 GHMP kinase, ATP-binding, conserved site H5404_16615 IPR022963 Galactokinase, bacterial H5404_16615 IPR000705 Galactokinase H5404_16615 IPR020568 Ribosomal protein S5 domain 2-type fold H5404_16615 IPR019741 Galactokinase, conserved site H5404_16615 IPR019539 Galactokinase galactose-binding domain H5404_16615 IPR013750 GHMP kinase, C-terminal domain H5404_16615 IPR036554 GHMP kinase, C-terminal domain superfamily H5404_16615 IPR006204 GHMP kinase N-terminal domain H5404_16615 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup H5404_16615 IPR006206 Mevalonate/galactokinase H5404_16620 IPR001937 Galactose-1-phosphate uridyl transferase, class I H5404_16620 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site H5404_16620 IPR036265 HIT-like superfamily H5404_16620 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal H5404_16620 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal H5404_16625 IPR005886 UDP-glucose 4-epimerase H5404_16625 IPR036291 NAD(P)-binding domain superfamily H5404_16625 IPR016040 NAD(P)-binding domain H5404_16630 IPR004090 Chemotaxis methyl-accepting receptor H5404_16630 IPR003660 HAMP domain H5404_16630 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain H5404_16630 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain H5404_16630 IPR000727 Target SNARE coiled-coil homology domain H5404_16635 IPR003192 Porin, LamB-type H5404_16635 IPR036998 Porin, LamB-type superfamily H5404_16635 IPR023738 Maltoporin H5404_16640 IPR017853 Glycoside hydrolase superfamily H5404_16640 IPR013780 Glycosyl hydrolase, all-beta H5404_16640 IPR013529 Glycoside hydrolase, family 42, N-terminal H5404_16640 IPR013739 Beta-galactosidase C-terminal H5404_16640 IPR003476 Glycoside hydrolase, family 42 H5404_16640 IPR029062 Class I glutamine amidotransferase-like H5404_16640 IPR013738 Beta-galactosidase trimerisation H5404_16645 IPR017853 Glycoside hydrolase superfamily H5404_16645 IPR011683 Glycosyl hydrolase family 53 H5404_16650 IPR000515 ABC transporter type 1, transmembrane domain MetI-like H5404_16650 IPR035906 MetI-like superfamily H5404_16655 IPR035906 MetI-like superfamily H5404_16655 IPR000515 ABC transporter type 1, transmembrane domain MetI-like H5404_16660 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein H5404_16660 IPR006059 Bacterial extracellular solute-binding protein H5404_16665 IPR017871 ABC transporter, conserved site H5404_16665 IPR003439 ABC transporter-like H5404_16665 IPR003593 AAA+ ATPase domain H5404_16665 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_16665 IPR015855 ABC transporter, maltose/maltodextrin import, MalK H5404_16665 IPR008995 Molybdate/tungstate binding, C-terminal H5404_16665 IPR040582 MalK, OB fold domain H5404_16670 IPR000843 LacI-type HTH domain H5404_16670 IPR028082 Periplasmic binding protein-like I H5404_16670 IPR010982 Lambda repressor-like, DNA-binding domain superfamily H5404_16675 IPR017853 Glycoside hydrolase superfamily H5404_16675 IPR011683 Glycosyl hydrolase family 53 H5404_16685 IPR001207 Transposase, mutator type H5404_16730 IPR001207 Transposase, mutator type H5404_16750 IPR038109 DNA-binding recombinase domain superfamily H5404_16750 IPR011109 DNA-binding recombinase domain H5404_16750 IPR006119 Resolvase, N-terminal catalytic domain H5404_16750 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily H5404_16750 IPR025827 Recombinase zinc beta ribbon domain H5404_16765 IPR003607 HD/PDEase domain H5404_16765 IPR006261 dNTP triphosphohydrolase H5404_16765 IPR027432 Deoxyguanosinetriphosphate triphosphohydrolase, C-terminal H5404_16765 IPR023024 dNTP triphosphohydrolase, type 3 H5404_16765 IPR026875 Phosphohydrolase-associated domain H5404_16765 IPR006674 HD domain H5404_16765 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain superfamily H5404_16780 IPR004960 Bacterial lipid A biosynthesis acyltransferase H5404_16780 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase H5404_16785 IPR002293 Amino acid/polyamine transporter I H5404_16795 IPR029062 Class I glutamine amidotransferase-like H5404_16795 IPR005697 Homoserine O-succinyltransferase MetA H5404_16795 IPR033752 MetA family H5404_16800 IPR013360 Pilus biogenesis/stability type IV, PilW H5404_16800 IPR013026 Tetratricopeptide repeat-containing domain H5404_16800 IPR011990 Tetratricopeptide-like helical domain superfamily H5404_16800 IPR019734 Tetratricopeptide repeat H5404_16810 IPR001633 EAL domain H5404_16810 IPR035919 EAL domain superfamily H5404_16810 IPR000160 GGDEF domain H5404_16810 IPR005330 MHYT domain H5404_16810 IPR029787 Nucleotide cyclase H5404_16815 IPR011006 CheY-like superfamily H5404_16815 IPR003660 HAMP domain H5404_16815 IPR003594 Histidine kinase/HSP90-like ATPase H5404_16815 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_16815 IPR004358 Signal transduction histidine kinase-related protein, C-terminal H5404_16815 IPR001789 Signal transduction response regulator, receiver domain H5404_16815 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain H5404_16815 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily H5404_16815 IPR019247 Histidine kinase BarA, N-terminal H5404_16815 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain H5404_16815 IPR005467 Histidine kinase domain H5404_16815 IPR036641 HPT domain superfamily H5404_16830 IPR001451 Hexapeptide repeat H5404_16830 IPR018357 Hexapeptide transferase, conserved site H5404_16830 IPR039369 Galactoside O-acetyltransferase LacA-like H5404_16830 IPR024688 Maltose/galactoside acetyltransferase H5404_16830 IPR011004 Trimeric LpxA-like superfamily H5404_16840 IPR008173 Adenylyl cyclase CyaB H5404_16840 IPR033469 CYTH-like domain superfamily H5404_16840 IPR023577 CYTH domain H5404_16850 IPR038056 YjbR-like superfamily H5404_16850 IPR007351 Uncharacterised protein YjbR H5404_16855 IPR023187 Transcriptional regulator MarR-type, conserved site H5404_16855 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_16855 IPR036390 Winged helix DNA-binding domain superfamily H5404_16855 IPR000835 MarR-type HTH domain H5404_16865 IPR009057 Homeobox-like domain superfamily H5404_16865 IPR018060 DNA binding HTH domain, AraC-type H5404_16865 IPR018062 HTH domain AraC-type, conserved site H5404_16865 IPR020449 Transcription regulator HTH, AraC- type H5404_16870 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain H5404_16870 IPR002318 Alanine-tRNA ligase, class IIc H5404_16870 IPR009000 Translation protein, beta-barrel domain superfamily H5404_16870 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal H5404_16870 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria H5404_16870 IPR003156 DHHA1 domain H5404_16870 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily H5404_16870 IPR012947 Threonyl/alanyl tRNA synthetase, SAD H5404_16870 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily H5404_16880 IPR001633 EAL domain H5404_16880 IPR035919 EAL domain superfamily H5404_16880 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_16880 IPR000792 Transcription regulator LuxR, C-terminal H5404_16880 IPR016032 Signal transduction response regulator, C-terminal effector H5404_16885 IPR038222 DHHA2 domain superfamily H5404_16885 IPR022934 Manganese-dependent inorganic pyrophosphatase, probable H5404_16885 IPR004097 DHHA2 domain H5404_16885 IPR001667 DDH domain H5404_16885 IPR038763 DHH phosphoesterase superfamily H5404_16890 IPR015421 Pyridoxal phosphate-dependent transferase, major domain H5404_16890 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 H5404_16890 IPR004632 4-aminobutyrate aminotransferase, bacterial H5404_16890 IPR005814 Aminotransferase class-III H5404_16890 IPR015424 Pyridoxal phosphate-dependent transferase H5404_16895 IPR010102 Succinate semialdehyde dehydrogenase H5404_16895 IPR016161 Aldehyde/histidinol dehydrogenase H5404_16895 IPR015590 Aldehyde dehydrogenase domain H5404_16895 IPR016162 Aldehyde dehydrogenase, N-terminal H5404_16895 IPR029510 Aldehyde dehydrogenase, glutamic acid active site H5404_16895 IPR016160 Aldehyde dehydrogenase, cysteine active site H5404_16895 IPR016163 Aldehyde dehydrogenase, C-terminal H5404_16900 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type H5404_16900 IPR017754 Agmatine deiminase H5404_16905 IPR003010 Carbon-nitrogen hydrolase H5404_16905 IPR036526 Carbon-nitrogen hydrolase superfamily H5404_16910 IPR036188 FAD/NAD(P)-binding domain superfamily H5404_16910 IPR006076 FAD dependent oxidoreductase H5404_16915 IPR016161 Aldehyde/histidinol dehydrogenase H5404_16915 IPR016163 Aldehyde dehydrogenase, C-terminal H5404_16915 IPR015590 Aldehyde dehydrogenase domain H5404_16915 IPR016162 Aldehyde dehydrogenase, N-terminal H5404_16915 IPR029510 Aldehyde dehydrogenase, glutamic acid active site H5404_16915 IPR016160 Aldehyde dehydrogenase, cysteine active site H5404_16920 IPR010982 Lambda repressor-like, DNA-binding domain superfamily H5404_16920 IPR013096 Cupin 2, conserved barrel H5404_16920 IPR001387 Cro/C1-type helix-turn-helix domain H5404_16920 IPR011051 RmlC-like cupin domain superfamily H5404_16920 IPR014710 RmlC-like jelly roll fold H5404_16925 IPR029062 Class I glutamine amidotransferase-like H5404_16925 IPR017926 Glutamine amidotransferase H5404_16925 IPR011697 Peptidase C26 H5404_16930 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain H5404_16930 IPR008146 Glutamine synthetase, catalytic domain H5404_16930 IPR036651 Glutamine synthetase, N-terminal domain superfamily H5404_16930 IPR027303 Glutamine synthetase, glycine-rich site H5404_16935 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal H5404_16955 IPR016181 Acyl-CoA N-acyltransferase H5404_16955 IPR000182 GNAT domain H5404_16960 IPR004778 Homoserine/Threonine efflux protein H5404_16960 IPR001123 Amino acid exporter protein, LeuE-type H5404_17010 IPR036397 Ribonuclease H superfamily H5404_17010 IPR001584 Integrase, catalytic core H5404_17010 IPR025948 HTH-like domain H5404_17010 IPR012337 Ribonuclease H-like superfamily H5404_17060 IPR016181 Acyl-CoA N-acyltransferase H5404_17060 IPR000182 GNAT domain H5404_17125 IPR036397 Ribonuclease H superfamily H5404_17125 IPR012337 Ribonuclease H-like superfamily H5404_17125 IPR001584 Integrase, catalytic core H5404_17125 IPR025948 HTH-like domain H5404_17160 IPR037523 Vicinal oxygen chelate (VOC) domain H5404_17160 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain H5404_17160 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase H5404_17165 IPR025948 HTH-like domain H5404_17165 IPR001584 Integrase, catalytic core H5404_17165 IPR012337 Ribonuclease H-like superfamily H5404_17165 IPR036397 Ribonuclease H superfamily H5404_17255 IPR004778 Homoserine/Threonine efflux protein H5404_17255 IPR001123 Amino acid exporter protein, LeuE-type H5404_17270 IPR036397 Ribonuclease H superfamily H5404_17270 IPR001598 Transposase, IS30, conserved site H5404_17270 IPR001584 Integrase, catalytic core H5404_17270 IPR009057 Homeobox-like domain superfamily H5404_17270 IPR012337 Ribonuclease H-like superfamily H5404_17435 IPR011946 Integrase, integron-type H5404_17435 IPR010998 Integrase/recombinase, N-terminal H5404_17435 IPR004107 Integrase, SAM-like, N-terminal H5404_17435 IPR002104 Integrase, catalytic domain H5404_17435 IPR013762 Integrase-like, catalytic domain superfamily H5404_17435 IPR011010 DNA breaking-rejoining enzyme, catalytic core H5404_17450 IPR016181 Acyl-CoA N-acyltransferase H5404_17450 IPR000182 GNAT domain H5404_17455 IPR035965 PAS domain superfamily H5404_17455 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_17455 IPR030828 TyrR family, helix-turn-helix domain H5404_17455 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 H5404_17455 IPR003593 AAA+ ATPase domain H5404_17455 IPR002912 ACT domain H5404_17455 IPR000014 PAS domain H5404_17455 IPR025944 Sigma-54 interaction domain, conserved site H5404_17455 IPR009057 Homeobox-like domain superfamily H5404_17455 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 H5404_17455 IPR002078 RNA polymerase sigma factor 54 interaction domain H5404_17460 IPR021147 Protein of unknown function DUF697 H5404_17460 IPR006507 Uncharacterised protein family UPF0283 H5404_17465 IPR007413 Protein of unknown function DUF463, YcjX-like protein H5404_17480 IPR015890 Chorismate-utilising enzyme, C-terminal H5404_17480 IPR006805 Anthranilate synthase component I, N-terminal H5404_17480 IPR019999 Anthranilate synthase component I-like H5404_17480 IPR005801 ADC synthase H5404_17480 IPR005802 Aminodeoxychorismate synthase, component I H5404_17485 IPR003594 Histidine kinase/HSP90-like ATPase H5404_17485 IPR005467 Histidine kinase domain H5404_17485 IPR004358 Signal transduction histidine kinase-related protein, C-terminal H5404_17485 IPR001789 Signal transduction response regulator, receiver domain H5404_17485 IPR035965 PAS domain superfamily H5404_17485 IPR015387 LuxQ, periplasmic H5404_17485 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily H5404_17485 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_17485 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain H5404_17485 IPR029151 Periplasmic sensor-like domain superfamily H5404_17485 IPR011006 CheY-like superfamily H5404_17495 IPR015797 NUDIX hydrolase-like domain superfamily H5404_17495 IPR000059 NUDIX hydrolase, NudL, conserved site H5404_17495 IPR023735 Uncharacterised nudix hydrolase NudL H5404_17495 IPR000086 NUDIX hydrolase domain H5404_17500 IPR004694 Hydroxy amino acid transporter H5404_17500 IPR018227 Amino acid/polyamine transporter 2 H5404_17505 IPR029009 Allosteric substrate binding domain superfamily H5404_17505 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form H5404_17505 IPR005130 Serine dehydratase-like, alpha subunit H5404_17505 IPR005131 Serine dehydratase beta chain H5404_17510 IPR007024 BLUF domain H5404_17510 IPR036046 Acylphosphatase-like domain superfamily H5404_17510 IPR035919 EAL domain superfamily H5404_17510 IPR001633 EAL domain H5404_17520 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family H5404_17520 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily H5404_17525 IPR000727 Target SNARE coiled-coil homology domain H5404_17525 IPR003660 HAMP domain H5404_17525 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain H5404_17525 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain H5404_17525 IPR004090 Chemotaxis methyl-accepting receptor H5404_17530 IPR004522 Asparagine-tRNA ligase H5404_17530 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type H5404_17530 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb H5404_17530 IPR006195 Aminoacyl-tRNA synthetase, class II H5404_17530 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) H5404_17530 IPR012340 Nucleic acid-binding, OB-fold H5404_17540 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 H5404_17540 IPR015424 Pyridoxal phosphate-dependent transferase H5404_17540 IPR036390 Winged helix DNA-binding domain superfamily H5404_17540 IPR015421 Pyridoxal phosphate-dependent transferase, major domain H5404_17540 IPR000524 Transcription regulator HTH, GntR H5404_17540 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_17540 IPR004839 Aminotransferase, class I/classII H5404_17555 IPR004839 Aminotransferase, class I/classII H5404_17555 IPR015421 Pyridoxal phosphate-dependent transferase, major domain H5404_17555 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site H5404_17555 IPR015424 Pyridoxal phosphate-dependent transferase H5404_17555 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 H5404_17555 IPR000796 Aspartate/other aminotransferase H5404_17575 IPR003660 HAMP domain H5404_17575 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain H5404_17580 IPR018093 BCCT transporter, conserved site H5404_17580 IPR000060 BCCT transporter family H5404_17585 IPR036390 Winged helix DNA-binding domain superfamily H5404_17585 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_17585 IPR000835 MarR-type HTH domain H5404_17590 IPR000792 Transcription regulator LuxR, C-terminal H5404_17590 IPR001789 Signal transduction response regulator, receiver domain H5404_17590 IPR016032 Signal transduction response regulator, C-terminal effector H5404_17590 IPR011006 CheY-like superfamily H5404_17595 IPR003594 Histidine kinase/HSP90-like ATPase H5404_17595 IPR017171 Signal transduction histidine kinase, MctS H5404_17595 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain H5404_17595 IPR033480 Single Cache domain 2 H5404_17595 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_17600 IPR004681 TRAP transporter large membrane protein DctM H5404_17600 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit H5404_17610 IPR041722 Alpha-keto acid binding periplasmic protein H5404_17610 IPR018389 TRAP transporter solute receptor DctP/TeaA H5404_17610 IPR038404 TRAP transporter solute receptor DctP superfamily H5404_17610 IPR026289 Solute binding protein, TakP-like H5404_17625 IPR001279 Metallo-beta-lactamase H5404_17625 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like H5404_17630 IPR006311 Twin-arginine translocation pathway, signal sequence H5404_17630 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily H5404_17630 IPR010275 Protein of unknown function DUF882 H5404_17635 IPR038063 L,D-transpeptidase catalytic domain-like H5404_17635 IPR002477 Peptidoglycan binding-like H5404_17635 IPR036365 PGBD-like superfamily H5404_17635 IPR005490 L,D-transpeptidase catalytic domain H5404_17660 IPR032677 GTP cyclohydrolase II H5404_17660 IPR000926 GTP cyclohydrolase II, RibA H5404_17660 IPR036144 RibA-like superfamily H5404_17670 IPR005616 CcmH/CycL/Ccl2/NrfF family H5404_17670 IPR013026 Tetratricopeptide repeat-containing domain H5404_17670 IPR011990 Tetratricopeptide-like helical domain superfamily H5404_17670 IPR019734 Tetratricopeptide repeat H5404_17670 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily H5404_17670 IPR017565 Formate-dependent nitrite reductase complex, subunit NrfF H5404_17675 IPR013740 Redoxin H5404_17675 IPR036249 Thioredoxin-like superfamily H5404_17675 IPR017937 Thioredoxin, conserved site H5404_17675 IPR013766 Thioredoxin domain H5404_17675 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE H5404_17680 IPR002541 Cytochrome c assembly protein H5404_17680 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal H5404_17680 IPR003570 Cytochrome c-type biogenesis protein NrfE H5404_17680 IPR003568 Cytochrome c-type biogenesis protein CcmF H5404_17680 IPR003567 Cytochrome c-type biogenesis protein H5404_17680 IPR017563 Cytochrome c nitrate reductase biogenesis protein NrfE H5404_17685 IPR017566 NrfD H5404_17685 IPR005614 NrfD family H5404_17690 IPR017567 Cytochrome c nitrite reductase, Fe-S protein H5404_17690 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain H5404_17690 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site H5404_17690 IPR006311 Twin-arginine translocation pathway, signal sequence H5404_17700 IPR003321 Cytochrome c552 H5404_17700 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit H5404_17700 IPR011031 Multihaem cytochrome H5404_17700 IPR036280 Multiheme cytochrome superfamily H5404_17715 IPR005743 DNA gyrase, subunit A H5404_17715 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal H5404_17715 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta H5404_17715 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal H5404_17715 IPR013760 DNA topoisomerase, type IIA-like domain superfamily H5404_17715 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily H5404_17715 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat H5404_17720 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_17720 IPR010233 Ubiquinone biosynthesis O-methyltransferase H5404_17725 IPR039718 Ribonucleoside-diphosphate reductase large subunit H5404_17725 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal H5404_17725 IPR013346 Ribonucleotide reductase, class I , alpha subunit H5404_17725 IPR000788 Ribonucleotide reductase large subunit, C-terminal H5404_17725 IPR005144 ATP-cone domain H5404_17725 IPR013509 Ribonucleotide reductase large subunit, N-terminal H5404_17730 IPR009078 Ferritin-like superfamily H5404_17730 IPR012348 Ribonucleotide reductase-like H5404_17730 IPR033909 Ribonucleotide reductase small subunit H5404_17730 IPR030475 Ribonucleotide reductase small subunit, acitve site H5404_17730 IPR000358 Ribonucleotide reductase small subunit family H5404_17740 IPR036653 CinA-like, C-terminal H5404_17740 IPR008135 Competence-induced protein CinA H5404_17740 IPR001453 MoaB/Mog domain H5404_17740 IPR036425 MoaB/Mog-like domain superfamily H5404_17755 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal H5404_17755 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal H5404_17755 IPR005730 Carboxynorspermidine decarboxylase H5404_17755 IPR029066 PLP-binding barrel H5404_17760 IPR036291 NAD(P)-binding domain superfamily H5404_17760 IPR005097 Saccharopine dehydrogenase, NADP binding domain H5404_17760 IPR032095 Saccharopine dehydrogenase, C-terminal H5404_17765 IPR004637 2,4-diaminobutyrate 4-transaminase H5404_17765 IPR015421 Pyridoxal phosphate-dependent transferase, major domain H5404_17765 IPR005814 Aminotransferase class-III H5404_17765 IPR015424 Pyridoxal phosphate-dependent transferase H5404_17765 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 H5404_17790 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase H5404_17790 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial H5404_17790 IPR000462 CDP-alcohol phosphatidyltransferase H5404_17795 IPR010994 RuvA domain 2-like H5404_17795 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 H5404_17795 IPR004791 UvrABC system, subunit C H5404_17795 IPR036876 UVR domain superfamily H5404_17795 IPR001943 UVR domain H5404_17795 IPR000305 GIY-YIG endonuclease H5404_17795 IPR038476 UvrC homology region 2 superfamily H5404_17795 IPR035901 GIY-YIG endonuclease superfamily H5404_17795 IPR001162 UvrC family homology region H5404_17800 IPR011006 CheY-like superfamily H5404_17800 IPR016032 Signal transduction response regulator, C-terminal effector H5404_17800 IPR001789 Signal transduction response regulator, receiver domain H5404_17800 IPR000792 Transcription regulator LuxR, C-terminal H5404_17805 IPR017964 DNA-directed DNA polymerase, family B, conserved site H5404_17805 IPR006172 DNA-directed DNA polymerase, family B H5404_17805 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain H5404_17805 IPR023211 DNA polymerase, palm domain superfamily H5404_17805 IPR036397 Ribonuclease H superfamily H5404_17805 IPR012337 Ribonuclease H-like superfamily H5404_17805 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain H5404_17805 IPR042087 DNA polymerase family B, C-terminal domain H5404_17815 IPR020599 Translation elongation factor P/YeiP H5404_17815 IPR014722 Ribosomal protein L2, domain 2 H5404_17815 IPR013185 Translation elongation factor, KOW-like H5404_17815 IPR015365 Elongation factor P, C-terminal H5404_17815 IPR012340 Nucleic acid-binding, OB-fold H5404_17815 IPR011897 Translation elongation factor P-like, YeiP H5404_17815 IPR001059 Translation elongation factor P/YeiP, central H5404_17815 IPR013852 Translation elongation factor P/YeiP, conserved site H5404_17815 IPR008991 Translation protein SH3-like domain superfamily H5404_17820 IPR036763 Putative dsDNA mimic superfamily H5404_17820 IPR007376 dsDNA mimic, putative H5404_17825 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site H5404_17825 IPR036986 RNA-binding S4 domain superfamily H5404_17825 IPR006145 Pseudouridine synthase, RsuA/RluA H5404_17825 IPR042092 Pseudouridine synthase, RsuA/RluB/E/F, catalytic domain H5404_17825 IPR020103 Pseudouridine synthase, catalytic domain superfamily H5404_17825 IPR002942 RNA-binding S4 domain H5404_17825 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F H5404_17835 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily H5404_17835 IPR006070 YrdC-like domain H5404_17840 IPR004013 PHP domain H5404_17840 IPR003141 Polymerase/histidinol phosphatase, N-terminal H5404_17840 IPR016195 Polymerase/histidinol phosphatase-like H5404_17845 IPR012639 Tryptophan operon leader peptide H5404_17850 IPR006805 Anthranilate synthase component I, N-terminal H5404_17850 IPR005801 ADC synthase H5404_17850 IPR019999 Anthranilate synthase component I-like H5404_17850 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial H5404_17850 IPR015890 Chorismate-utilising enzyme, C-terminal H5404_17855 IPR029062 Class I glutamine amidotransferase-like H5404_17855 IPR017926 Glutamine amidotransferase H5404_17855 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain H5404_17860 IPR005940 Anthranilate phosphoribosyl transferase H5404_17860 IPR000312 Glycosyl transferase, family 3 H5404_17860 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily H5404_17860 IPR017459 Glycosyl transferase family 3, N-terminal domain H5404_17860 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily H5404_17865 IPR011060 Ribulose-phosphate binding barrel H5404_17865 IPR013785 Aldolase-type TIM barrel H5404_17865 IPR013798 Indole-3-glycerol phosphate synthase H5404_17865 IPR001468 Indole-3-glycerol phosphate synthase, conserved site H5404_17865 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) H5404_17870 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme H5404_17870 IPR023026 Tryptophan synthase beta chain/beta chain-like H5404_17870 IPR006654 Tryptophan synthase, beta chain H5404_17870 IPR006653 Tryptophan synthase, beta chain, conserved site H5404_17870 IPR001926 Pyridoxal-phosphate dependent enzyme H5404_17875 IPR002028 Tryptophan synthase, alpha chain H5404_17875 IPR018204 Tryptophan synthase, alpha chain, active site H5404_17875 IPR011060 Ribulose-phosphate binding barrel H5404_17875 IPR013785 Aldolase-type TIM barrel H5404_17880 IPR036390 Winged helix DNA-binding domain superfamily H5404_17880 IPR000595 Cyclic nucleotide-binding domain H5404_17880 IPR012318 Crp-type HTH domain H5404_17880 IPR018490 Cyclic nucleotide-binding-like H5404_17880 IPR014710 RmlC-like jelly roll fold H5404_17880 IPR018335 Transcription regulator HTH, Crp-type, conserved site H5404_17880 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_17885 IPR042099 AMP-dependent synthetase-like superfamily H5404_17885 IPR000873 AMP-dependent synthetase/ligase H5404_17885 IPR020845 AMP-binding, conserved site H5404_17885 IPR020459 AMP-binding H5404_17885 IPR025110 AMP-binding enzyme, C-terminal domain H5404_17895 IPR033380 Glutamate-aspartate symport protein GltP/GltT H5404_17895 IPR001991 Sodium:dicarboxylate symporter H5404_17895 IPR036458 Sodium:dicarboxylate symporter superfamily H5404_17895 IPR018107 Sodium:dicarboxylate symporter, conserved site H5404_18020 IPR039418 LexA-like H5404_18020 IPR036286 LexA/Signal peptidase-like superfamily H5404_18020 IPR006197 Peptidase S24, LexA-like H5404_18020 IPR015927 Peptidase S24/S26A/S26B/S26C H5404_18025 IPR036775 DNA polymerase, Y-family, little finger domain superfamily H5404_18025 IPR001126 UmuC domain H5404_18025 IPR025188 Domain of unknown function DUF4113 H5404_18025 IPR017961 DNA polymerase, Y-family, little finger domain H5404_18060 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_18060 IPR011639 Restriction modification methylase Eco57I H5404_18065 IPR009528 BsuBI/PstI restriction endonuclease domain H5404_18065 IPR041962 BsuBI/PstI restriction endonuclease, N-terminal domain superfamily H5404_18065 IPR041454 BsuBI/PstI restriction endonuclease, HTH domain H5404_18065 IPR041963 BsuBI/PstI restriction endonuclease, C-terminal domain superfamily H5404_18230 IPR035304 Acyl homoserine lactone synthase H5404_18235 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_18235 IPR011006 CheY-like superfamily H5404_18235 IPR003594 Histidine kinase/HSP90-like ATPase H5404_18235 IPR005467 Histidine kinase domain H5404_18235 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain H5404_18235 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily H5404_18235 IPR004358 Signal transduction histidine kinase-related protein, C-terminal H5404_18235 IPR001789 Signal transduction response regulator, receiver domain H5404_18245 IPR006008 Intracellular septation protein A H5404_18250 IPR029069 HotDog domain superfamily H5404_18250 IPR006683 Thioesterase domain H5404_18250 IPR033120 Hotdog acyl-CoA thioesterase (ACOT)-type domain H5404_18250 IPR040170 Cytosolic acyl coenzyme A thioester hydrolase H5404_18255 IPR011008 Dimeric alpha-beta barrel H5404_18255 IPR005545 YCII-related H5404_18280 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_18280 IPR003593 AAA+ ATPase domain H5404_18280 IPR001387 Cro/C1-type helix-turn-helix domain H5404_18280 IPR010982 Lambda repressor-like, DNA-binding domain superfamily H5404_18280 IPR009084 B transposition protein, C-terminal H5404_18280 IPR036733 B transposition protein, C-terminal domain superfamily H5404_18330 IPR023006 Uncharacterised protein family UPF0225 H5404_18330 IPR004027 SEC-C motif H5404_18330 IPR032710 NTF2-like domain superfamily H5404_18505 IPR002052 DNA methylase, N-6 adenine-specific, conserved site H5404_18505 IPR001091 Restriction/modification DNA-methylase H5404_18505 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_18505 IPR002941 DNA methylase N-4/N-6 H5404_18530 IPR038071 UROD/MetE-like superfamily H5404_18530 IPR006276 Cobalamin-independent methionine synthase H5404_18530 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal H5404_18530 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal H5404_18535 IPR036390 Winged helix DNA-binding domain superfamily H5404_18535 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_18535 IPR000847 Transcription regulator HTH, LysR H5404_18535 IPR037406 HTH-type transcriptional regulator MetR, PBP2 domain H5404_18535 IPR005119 LysR, substrate-binding H5404_18550 IPR035919 EAL domain superfamily H5404_18550 IPR001633 EAL domain H5404_18550 IPR029016 GAF-like domain superfamily H5404_18550 IPR001294 Phytochrome H5404_18550 IPR000160 GGDEF domain H5404_18550 IPR003018 GAF domain H5404_18550 IPR029787 Nucleotide cyclase H5404_18550 IPR016132 Phytochrome chromophore attachment domain H5404_18550 IPR013515 Phytochrome, central region H5404_18555 IPR024560 Uncharacterised protein family UPF0313, C-terminal H5404_18555 IPR022946 Uncharacterised protein family UPF0313 H5404_18555 IPR023404 Radical SAM, alpha/beta horseshoe H5404_18555 IPR007197 Radical SAM H5404_18555 IPR020612 Methylthiotransferase, conserved site H5404_18555 IPR006638 Elp3/MiaB/NifB H5404_18555 IPR013704 Uncharacterised protein family UPF0313, N-terminal H5404_18560 IPR003660 HAMP domain H5404_18560 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain H5404_18565 IPR001789 Signal transduction response regulator, receiver domain H5404_18565 IPR001867 OmpR/PhoB-type DNA-binding domain H5404_18565 IPR039420 Transcriptional regulatory protein WalR-like H5404_18565 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_18565 IPR011006 CheY-like superfamily H5404_18570 IPR004358 Signal transduction histidine kinase-related protein, C-terminal H5404_18570 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_18570 IPR003594 Histidine kinase/HSP90-like ATPase H5404_18570 IPR003660 HAMP domain H5404_18570 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain H5404_18570 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily H5404_18570 IPR005467 Histidine kinase domain H5404_18590 IPR005119 LysR, substrate-binding H5404_18590 IPR000847 Transcription regulator HTH, LysR H5404_18590 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_18590 IPR036390 Winged helix DNA-binding domain superfamily H5404_18595 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain H5404_18595 IPR005694 Efflux pump membrane protein H5404_18595 IPR030196 Multidrug resistance protein MdtN H5404_18605 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal H5404_18605 IPR038071 UROD/MetE-like superfamily H5404_18605 IPR006276 Cobalamin-independent methionine synthase H5404_18605 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal H5404_18615 IPR037923 Transcription regulator HTH-like H5404_18615 IPR018062 HTH domain AraC-type, conserved site H5404_18615 IPR018060 DNA binding HTH domain, AraC-type H5404_18615 IPR003313 AraC-type arabinose-binding/dimerisation domain H5404_18615 IPR009057 Homeobox-like domain superfamily H5404_18620 IPR000868 Isochorismatase-like H5404_18620 IPR036380 Isochorismatase-like superfamily H5404_18625 IPR017911 ABC transporter, macrolide export, ATP-binding domain H5404_18625 IPR025857 MacB-like periplasmic core domain H5404_18625 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_18625 IPR003439 ABC transporter-like H5404_18625 IPR003838 ABC transporter permease protein domain H5404_18625 IPR003593 AAA+ ATPase domain H5404_18625 IPR017871 ABC transporter, conserved site H5404_18630 IPR017911 ABC transporter, macrolide export, ATP-binding domain H5404_18630 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_18630 IPR025857 MacB-like periplasmic core domain H5404_18630 IPR003838 ABC transporter permease protein domain H5404_18630 IPR003593 AAA+ ATPase domain H5404_18630 IPR017871 ABC transporter, conserved site H5404_18630 IPR003439 ABC transporter-like H5404_18635 IPR003838 ABC transporter permease protein domain H5404_18635 IPR003593 AAA+ ATPase domain H5404_18635 IPR003439 ABC transporter-like H5404_18635 IPR017871 ABC transporter, conserved site H5404_18635 IPR025857 MacB-like periplasmic core domain H5404_18635 IPR017911 ABC transporter, macrolide export, ATP-binding domain H5404_18635 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_18645 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain H5404_18645 IPR030190 Macrolide export protein MacA H5404_18645 IPR006143 RND efflux pump, membrane fusion protein H5404_18660 IPR030390 RNA methyltransferase TrmA, active site H5404_18660 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_18660 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA H5404_18660 IPR010280 (Uracil-5)-methyltransferase family H5404_18675 IPR017937 Thioredoxin, conserved site H5404_18675 IPR036249 Thioredoxin-like superfamily H5404_18675 IPR013766 Thioredoxin domain H5404_18675 IPR005746 Thioredoxin H5404_18680 IPR013766 Thioredoxin domain H5404_18680 IPR017937 Thioredoxin, conserved site H5404_18680 IPR036249 Thioredoxin-like superfamily H5404_18680 IPR022910 Thiol:disulphide interchange protein DsbD H5404_18680 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily H5404_18680 IPR003834 Cytochrome C biogenesis protein, transmembrane domain H5404_18680 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain H5404_18680 IPR035671 DsbD gamma H5404_18690 IPR005119 LysR, substrate-binding H5404_18690 IPR000847 Transcription regulator HTH, LysR H5404_18690 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_18690 IPR036390 Winged helix DNA-binding domain superfamily H5404_18695 IPR000792 Transcription regulator LuxR, C-terminal H5404_18695 IPR001789 Signal transduction response regulator, receiver domain H5404_18695 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_18695 IPR011006 CheY-like superfamily H5404_18700 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_18700 IPR005467 Histidine kinase domain H5404_18700 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain H5404_18700 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily H5404_18700 IPR003594 Histidine kinase/HSP90-like ATPase H5404_18700 IPR004358 Signal transduction histidine kinase-related protein, C-terminal H5404_18705 IPR006311 Twin-arginine translocation pathway, signal sequence H5404_18705 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site H5404_18705 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain H5404_18710 IPR005614 NrfD family H5404_18715 IPR037946 Tetrathionate reductase subunit A, MopB domain H5404_18715 IPR006657 Molybdopterin dinucleotide-binding domain H5404_18715 IPR006656 Molybdopterin oxidoreductase H5404_18715 IPR009010 Aspartate decarboxylase-like domain superfamily H5404_18715 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain H5404_18715 IPR041929 Tetrathionate reductase subunit A, N-terminal H5404_18720 IPR024167 Cytochrome c4-like H5404_18720 IPR009056 Cytochrome c-like domain H5404_18720 IPR036909 Cytochrome c-like domain superfamily H5404_18725 IPR009056 Cytochrome c-like domain H5404_18725 IPR036909 Cytochrome c-like domain superfamily H5404_18730 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type H5404_18730 IPR007498 Intermembrane transport protein PqiA-like H5404_18735 IPR003399 Mce/MlaD H5404_18745 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase H5404_18745 IPR003342 Glycosyl transferase family 39/83 H5404_18755 IPR001173 Glycosyltransferase 2-like H5404_18755 IPR029044 Nucleotide-diphospho-sugar transferases H5404_18755 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase H5404_18760 IPR001509 NAD-dependent epimerase/dehydratase H5404_18760 IPR036291 NAD(P)-binding domain superfamily H5404_18770 IPR023765 Solute-binding protein family 5, conserved site H5404_18770 IPR039424 Solute-binding protein family 5 H5404_18770 IPR000914 Solute-binding protein family 5 domain H5404_18770 IPR030678 Peptide/nickel binding protein, MppA-type H5404_18775 IPR011060 Ribulose-phosphate binding barrel H5404_18775 IPR001754 Orotidine 5'-phosphate decarboxylase domain H5404_18775 IPR018089 Orotidine 5'-phosphate decarboxylase, active site H5404_18775 IPR014732 Orotidine 5'-phosphate decarboxylase H5404_18775 IPR013785 Aldolase-type TIM barrel H5404_18780 IPR013026 Tetratricopeptide repeat-containing domain H5404_18780 IPR011990 Tetratricopeptide-like helical domain superfamily H5404_18780 IPR030865 Lipopolysaccharide assembly protein B H5404_18780 IPR041166 LapB, rubredoxin metal binding domain H5404_18780 IPR019734 Tetratricopeptide repeat H5404_18785 IPR032906 Lipopolysaccharide assembly protein A H5404_18785 IPR010445 Lipopolysaccharide assembly protein A domain H5404_18790 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily H5404_18790 IPR005685 Integration host factor, beta subunit H5404_18790 IPR000119 Histone-like DNA-binding protein H5404_18790 IPR020816 Histone-like DNA-binding protein, conserved site H5404_18795 IPR003029 S1 domain H5404_18795 IPR022967 RNA-binding domain, S1 H5404_18795 IPR000110 Ribosomal protein S1 H5404_18795 IPR012340 Nucleic acid-binding, OB-fold H5404_18800 IPR011994 Cytidylate kinase domain H5404_18800 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_18800 IPR003136 Cytidylate kinase H5404_18805 IPR029045 ClpP/crotonase-like domain superfamily H5404_18805 IPR013703 Peptidase S49, N-terminal proteobacteria H5404_18805 IPR002142 Peptidase S49 H5404_18810 IPR002347 Short-chain dehydrogenase/reductase SDR H5404_18810 IPR036291 NAD(P)-binding domain superfamily H5404_18810 IPR020904 Short-chain dehydrogenase/reductase, conserved site H5404_18825 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type H5404_18825 IPR004805 DNA polymerase III, alpha subunit H5404_18825 IPR003141 Polymerase/histidinol phosphatase, N-terminal H5404_18825 IPR040982 DNA polymerase III alpha subunit finger domain H5404_18825 IPR004013 PHP domain H5404_18825 IPR029460 DNA polymerase, helix-hairpin-helix motif H5404_18825 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain H5404_18825 IPR023073 DNA polymerase, error-prone H5404_18830 IPR024181 Chemotaxis response regulator CheV H5404_18830 IPR036061 CheW-like domain superfamily H5404_18830 IPR002545 CheW-like domain H5404_18830 IPR011006 CheY-like superfamily H5404_18830 IPR001789 Signal transduction response regulator, receiver domain H5404_18835 IPR036390 Winged helix DNA-binding domain superfamily H5404_18835 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_18835 IPR000600 ROK family H5404_18840 IPR036918 Pyruvate kinase, C-terminal domain superfamily H5404_18840 IPR011037 Pyruvate kinase-like, insert domain superfamily H5404_18840 IPR001697 Pyruvate kinase H5404_18840 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily H5404_18840 IPR015795 Pyruvate kinase, C-terminal H5404_18840 IPR015793 Pyruvate kinase, barrel H5404_18840 IPR040442 Pyruvate kinase-like domain superfamily H5404_18840 IPR015806 Pyruvate kinase, insert domain superfamily H5404_18840 IPR018209 Pyruvate kinase, active site H5404_18845 IPR037483 YjjU-like H5404_18845 IPR002641 Patatin-like phospholipase domain H5404_18845 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase H5404_18860 IPR000175 Sodium:neurotransmitter symporter H5404_18860 IPR037272 Sodium:neurotransmitter symporter superfamily H5404_18875 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site H5404_18875 IPR011299 PTS system glucose-specific IIBC component H5404_18875 IPR003352 Phosphotransferase system, EIIC H5404_18875 IPR013013 Phosphotransferase system, EIIC component, type 1 H5404_18875 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component H5404_18875 IPR036878 Glucose permease domain IIB H5404_18875 IPR001996 Phosphotransferase system, IIB component, type 1 H5404_18880 IPR032466 Metal-dependent hydrolase H5404_18880 IPR018228 Deoxyribonuclease, TatD-related, conserved site H5404_18880 IPR001130 TatD family H5404_18880 IPR015991 Uncharacterised hydrolase TatD-type H5404_18885 IPR015199 DNA polymerase III, delta subunit, C-terminal H5404_18885 IPR004622 DNA polymerase III, delta prime subunit H5404_18885 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_18890 IPR039430 Thymidylate kinase-like domain H5404_18890 IPR018094 Thymidylate kinase H5404_18890 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_18890 IPR018095 Thymidylate kinase, conserved site H5404_18895 IPR003770 Endolytic murein transglycosylase H5404_18900 IPR036038 Aminotransferase-like, PLP-dependent enzymes H5404_18900 IPR018300 Aminotransferase, class IV, conserved site H5404_18900 IPR001544 Aminotransferase class IV H5404_18900 IPR017824 Aminodeoxychorismate lyase, class IV H5404_18905 IPR014030 Beta-ketoacyl synthase, N-terminal H5404_18905 IPR000794 Beta-ketoacyl synthase H5404_18905 IPR018201 Beta-ketoacyl synthase, active site H5404_18905 IPR014031 Beta-ketoacyl synthase, C-terminal H5404_18905 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain H5404_18905 IPR016039 Thiolase-like H5404_18905 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 H5404_18910 IPR006162 Phosphopantetheine attachment site H5404_18910 IPR003231 Acyl carrier protein (ACP) H5404_18910 IPR036736 ACP-like superfamily H5404_18910 IPR009081 Phosphopantetheine binding ACP domain H5404_18915 IPR002347 Short-chain dehydrogenase/reductase SDR H5404_18915 IPR020904 Short-chain dehydrogenase/reductase, conserved site H5404_18915 IPR036291 NAD(P)-binding domain superfamily H5404_18915 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase H5404_18920 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding H5404_18920 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type H5404_18920 IPR001227 Acyl transferase domain superfamily H5404_18920 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase H5404_18920 IPR014043 Acyl transferase H5404_18920 IPR024925 Malonyl CoA-acyl carrier protein transacylase H5404_18925 IPR016039 Thiolase-like H5404_18925 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 H5404_18925 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal H5404_18925 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III H5404_18930 IPR012281 Phospholipid biosynthesis protein, PlsX-like H5404_18930 IPR003664 Fatty acid synthesis PlsX protein H5404_18935 IPR002677 Ribosomal protein L32p H5404_18935 IPR011332 Zinc-binding ribosomal protein H5404_18940 IPR003772 Large ribosomal RNA subunit accumulation protein YceD H5404_18940 IPR039255 Large ribosomal RNA subunit accumulation protein YceD, bacteria H5404_18945 IPR029001 Inosine triphosphate pyrophosphatase-like H5404_18945 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein H5404_18950 IPR006145 Pseudouridine synthase, RsuA/RluA H5404_18950 IPR020103 Pseudouridine synthase, catalytic domain superfamily H5404_18950 IPR006225 Pseudouridine synthase, RluC/RluD H5404_18950 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site H5404_18950 IPR036986 RNA-binding S4 domain superfamily H5404_18950 IPR002942 RNA-binding S4 domain H5404_18955 IPR021968 Polyribonucleotide phosphorylase C-terminal H5404_18955 IPR004659 Ribonuclease E/G H5404_18955 IPR022967 RNA-binding domain, S1 H5404_18955 IPR012340 Nucleic acid-binding, OB-fold H5404_18955 IPR003029 S1 domain H5404_18955 IPR028878 Ribonuclease E H5404_18955 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G H5404_18960 IPR018045 Sulphate anion transporter, conserved site H5404_18960 IPR002645 STAS domain H5404_18960 IPR011547 SLC26A/SulP transporter domain H5404_18960 IPR001902 SLC26A/SulP transporter H5404_18960 IPR036513 STAS domain superfamily H5404_18965 IPR023485 Phosphotyrosine protein phosphatase I H5404_18965 IPR017867 Protein-tyrosine phosphatase, low molecular weight H5404_18965 IPR036196 Phosphotyrosine protein phosphatase I superfamily H5404_18970 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain H5404_18970 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR H5404_18970 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_18980 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_18980 IPR006083 Phosphoribulokinase/uridine kinase H5404_18980 IPR026008 Uridine kinase H5404_18980 IPR000764 Uridine kinase-like H5404_18985 IPR000808 Mrp, conserved site H5404_18985 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 H5404_18985 IPR019591 Mrp/NBP35 ATP-binding protein H5404_18985 IPR034904 Fe-S cluster assembly domain superfamily H5404_18985 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_18990 IPR033911 Methioninyl-tRNA synthetase core domain H5404_18990 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold H5404_18990 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding H5404_18990 IPR002547 tRNA-binding domain H5404_18990 IPR029038 Methionyl-tRNA synthetase, Zn-domain H5404_18990 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site H5404_18990 IPR015413 Methionyl/Leucyl tRNA synthetase H5404_18990 IPR012340 Nucleic acid-binding, OB-fold H5404_18990 IPR014758 Methionyl-tRNA synthetase H5404_18990 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal H5404_18990 IPR023458 Methionine-tRNA ligase, type 1 H5404_18990 IPR041872 Methionyl-tRNA synthetase, anticodon-binding domain H5404_19000 IPR008920 Transcription regulator FadR/GntR, C-terminal H5404_19000 IPR028374 FadR, C-terminal domain H5404_19000 IPR036390 Winged helix DNA-binding domain superfamily H5404_19000 IPR014178 Fatty acid response transcription factor FadR H5404_19000 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_19000 IPR000524 Transcription regulator HTH, GntR H5404_19005 IPR004671 Na+/H+ antiporter NhaB H5404_19010 IPR022920 Disulphide bond formation protein DsbB H5404_19010 IPR023380 DsbB-like superfamily H5404_19010 IPR003752 Disulphide bond formation protein DsbB/BdbC H5404_19015 IPR004027 SEC-C motif H5404_19015 IPR036255 YgfB-like superfamily H5404_19015 IPR011978 Uncharacterised protein family UPF0149 H5404_19020 IPR018517 tRNA-dihydrouridine synthase, conserved site H5404_19020 IPR001269 tRNA-dihydrouridine synthase H5404_19020 IPR032886 tRNA-dihydrouridine(16) synthase H5404_19020 IPR035587 DUS-like, FMN-binding domain H5404_19020 IPR013785 Aldolase-type TIM barrel H5404_19020 IPR042270 tRNA-dihydrouridine(16) synthase, C-terminal H5404_19025 IPR000160 GGDEF domain H5404_19025 IPR011006 CheY-like superfamily H5404_19025 IPR001789 Signal transduction response regulator, receiver domain H5404_19025 IPR029787 Nucleotide cyclase H5404_19030 IPR017069 Maltodextrin glucosidase H5404_19030 IPR006047 Glycosyl hydrolase, family 13, catalytic domain H5404_19030 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain H5404_19030 IPR014756 Immunoglobulin E-set H5404_19030 IPR017853 Glycoside hydrolase superfamily H5404_19030 IPR013780 Glycosyl hydrolase, all-beta H5404_19035 IPR015856 ABC transporter, CbiO/EcfA subunit H5404_19035 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_19035 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 H5404_19035 IPR017871 ABC transporter, conserved site H5404_19035 IPR003593 AAA+ ATPase domain H5404_19035 IPR003439 ABC transporter-like H5404_19040 IPR001851 ABC transporter, permease H5404_19050 IPR007334 Uncharacterised protein family UPF0208 H5404_19055 IPR023865 Aliphatic acid kinase, short-chain, conserved site H5404_19055 IPR000890 Aliphatic acid kinase, short-chain H5404_19055 IPR004372 Acetate/propionate kinase H5404_19060 IPR016475 Phosphate acetyltransferase, bacteria H5404_19060 IPR004614 Phosphate acetyltransferase H5404_19060 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_19060 IPR010766 DRTGG H5404_19060 IPR042113 Phosphate acetyltransferase, domain 1 H5404_19060 IPR042112 Phosphate acetyltransferase, domain 2 H5404_19060 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily H5404_19060 IPR002505 Phosphate acetyl/butaryl transferase H5404_19065 IPR025105 Domain of unknown function DUF4010 H5404_19075 IPR016639 Glutathione S-transferase Omega/GSH H5404_19075 IPR036249 Thioredoxin-like superfamily H5404_19075 IPR004045 Glutathione S-transferase, N-terminal H5404_19075 IPR040079 Glutathione Transferase family H5404_19075 IPR036282 Glutathione S-transferase, C-terminal domain superfamily H5404_19075 IPR010987 Glutathione S-transferase, C-terminal-like H5404_19080 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal H5404_19080 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_19080 IPR017871 ABC transporter, conserved site H5404_19080 IPR003593 AAA+ ATPase domain H5404_19080 IPR003439 ABC transporter-like H5404_19085 IPR003439 ABC transporter-like H5404_19085 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_19085 IPR017871 ABC transporter, conserved site H5404_19085 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal H5404_19085 IPR003593 AAA+ ATPase domain H5404_19090 IPR000515 ABC transporter type 1, transmembrane domain MetI-like H5404_19090 IPR035906 MetI-like superfamily H5404_19090 IPR025966 Oligopeptide transport permease C-like, N-terminal domain H5404_19095 IPR035906 MetI-like superfamily H5404_19095 IPR000515 ABC transporter type 1, transmembrane domain MetI-like H5404_19100 IPR000914 Solute-binding protein family 5 domain H5404_19100 IPR023765 Solute-binding protein family 5, conserved site H5404_19100 IPR039424 Solute-binding protein family 5 H5404_19100 IPR030678 Peptide/nickel binding protein, MppA-type H5404_19105 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily H5404_19105 IPR003448 Molybdopterin biosynthesis MoaE H5404_19110 IPR012675 Beta-grasp domain superfamily H5404_19110 IPR003749 Sulfur carrier ThiS/MoaD-like H5404_19110 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp H5404_19115 IPR023045 Molybdenum cofactor biosynthesis C H5404_19115 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily H5404_19115 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain H5404_19120 IPR036425 MoaB/Mog-like domain superfamily H5404_19120 IPR012245 Molybdenum cofactor biosynthesis protein MoaB H5404_19120 IPR008284 Molybdenum cofactor biosynthesis, conserved site H5404_19120 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria H5404_19120 IPR001453 MoaB/Mog domain H5404_19125 IPR007197 Radical SAM H5404_19125 IPR013483 Molybdenum cofactor biosynthesis protein A H5404_19125 IPR006638 Elp3/MiaB/NifB H5404_19125 IPR013785 Aldolase-type TIM barrel H5404_19125 IPR010505 Molybdenum cofactor synthesis C-terminal H5404_19130 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 H5404_19130 IPR010119 Gluconeogenesis factor H5404_19130 IPR038136 Gluconeogenesis factor superfamily H5404_19135 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain H5404_19135 IPR036641 HPT domain superfamily H5404_19140 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 H5404_19140 IPR003593 AAA+ ATPase domain H5404_19140 IPR025944 Sigma-54 interaction domain, conserved site H5404_19140 IPR002078 RNA polymerase sigma factor 54 interaction domain H5404_19140 IPR001789 Signal transduction response regulator, receiver domain H5404_19140 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_19140 IPR002197 DNA binding HTH domain, Fis-type H5404_19140 IPR009057 Homeobox-like domain superfamily H5404_19140 IPR011006 CheY-like superfamily H5404_19145 IPR024759 UvrB, YAD/RRR-motif-containing domain H5404_19145 IPR036876 UVR domain superfamily H5404_19145 IPR001943 UVR domain H5404_19145 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_19145 IPR001650 Helicase, C-terminal H5404_19145 IPR041471 UvrB, interaction domain H5404_19145 IPR014001 Helicase superfamily 1/2, ATP-binding domain H5404_19145 IPR004807 UvrABC system, subunit B H5404_19145 IPR006935 Helicase/UvrB, N-terminal H5404_19155 IPR003667 NqrDE/RnfAE H5404_19155 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA H5404_19160 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain H5404_19160 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site H5404_19160 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB H5404_19160 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria H5404_19160 IPR007202 4Fe-4S domain H5404_19165 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain H5404_19165 IPR009051 Alpha-helical ferredoxin H5404_19165 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC H5404_19165 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain H5404_19165 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily H5404_19165 IPR026902 RnfC Barrel sandwich hybrid domain H5404_19165 IPR019554 Soluble ligand binding domain H5404_19165 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site H5404_19170 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D H5404_19170 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD H5404_19175 IPR007329 FMN-binding H5404_19175 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG H5404_19180 IPR003667 NqrDE/RnfAE H5404_19180 IPR010968 Ion-translocating oxidoreductase complex subunit E H5404_19185 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif H5404_19185 IPR011257 DNA glycosylase H5404_19185 IPR004036 Endonuclease III-like, conserved site-2 H5404_19185 IPR004035 Endonuclease III, iron-sulphur binding site H5404_19185 IPR003265 HhH-GPD domain H5404_19185 IPR000445 Helix-hairpin-helix motif H5404_19185 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal H5404_19185 IPR005759 Endonuclease III H5404_19190 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain H5404_19190 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase H5404_19190 IPR018146 Glyoxalase I, conserved site H5404_19190 IPR037523 Vicinal oxygen chelate (VOC) domain H5404_19190 IPR004361 Glyoxalase I H5404_19195 IPR020206 Uncharacterised protein family, VP2110 H5404_19200 IPR036737 OmpA-like domain superfamily H5404_19200 IPR006690 Outer membrane protein, OmpA-like, conserved site H5404_19200 IPR006665 OmpA-like domain H5404_19200 IPR041544 MotY N-terminal domain H5404_19205 IPR013520 Exonuclease, RNase T/DNA polymerase III H5404_19205 IPR036397 Ribonuclease H superfamily H5404_19205 IPR012337 Ribonuclease H-like superfamily H5404_19205 IPR005987 Ribonuclease T H5404_19210 IPR032813 Putative Na+/H+ antiporter, N-terminal H5404_19210 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal H5404_19220 IPR033658 Glutaredoxin, PICOT-like H5404_19220 IPR036249 Thioredoxin-like superfamily H5404_19220 IPR002109 Glutaredoxin H5404_19220 IPR004480 Monothiol glutaredoxin-related H5404_19220 IPR014434 Monothiol glutaredoxin H5404_19225 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily H5404_19225 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily H5404_19225 IPR019831 Manganese/iron superoxide dismutase, N-terminal H5404_19225 IPR001189 Manganese/iron superoxide dismutase H5404_19225 IPR019833 Manganese/iron superoxide dismutase, binding site H5404_19225 IPR019832 Manganese/iron superoxide dismutase, C-terminal H5404_19240 IPR016161 Aldehyde/histidinol dehydrogenase H5404_19240 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase H5404_19240 IPR015590 Aldehyde dehydrogenase domain H5404_19240 IPR016162 Aldehyde dehydrogenase, N-terminal H5404_19240 IPR016163 Aldehyde dehydrogenase, C-terminal H5404_19240 IPR018211 Alcohol dehydrogenase, iron-type, conserved site H5404_19240 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA H5404_19240 IPR039697 Iron-type alcohol dehydrogenase-like H5404_19240 IPR034789 Bifunctional aldehyde-alcohol dehydrogenase, C-terminal domain H5404_19245 IPR002771 Multiple antibiotic resistance (MarC)-related H5404_19250 IPR018488 Cyclic nucleotide-binding, conserved site H5404_19250 IPR000595 Cyclic nucleotide-binding domain H5404_19250 IPR028325 Voltage-gated potassium channel H5404_19250 IPR018490 Cyclic nucleotide-binding-like H5404_19250 IPR014710 RmlC-like jelly roll fold H5404_19250 IPR005821 Ion transport domain H5404_19255 IPR012080 Aspartate-semialdehyde dehydrogenase H5404_19255 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type H5404_19255 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site H5404_19255 IPR000534 Semialdehyde dehydrogenase, NAD-binding H5404_19255 IPR012280 Semialdehyde dehydrogenase, dimerisation domain H5404_19255 IPR036291 NAD(P)-binding domain superfamily H5404_19260 IPR004770 Na+/H+ antiporter NhaC H5404_19260 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal H5404_19275 IPR007358 Nucleoid-associated protein NdpA H5404_19280 IPR023202 YejL-like superfamily H5404_19280 IPR009857 Uncharacterised protein family UPF0352 H5404_19285 IPR024588 Inner membrane protein YejM, N-terminal H5404_19285 IPR012159 Inner membrane protein YejM H5404_19285 IPR000917 Sulfatase, N-terminal H5404_19285 IPR017850 Alkaline-phosphatase-like, core domain superfamily H5404_19295 IPR000286 Histone deacetylase family H5404_19295 IPR023801 Histone deacetylase domain H5404_19295 IPR023696 Ureohydrolase domain superfamily H5404_19295 IPR037138 Histone deacetylase domain superfamily H5404_19300 IPR036291 NAD(P)-binding domain superfamily H5404_19300 IPR002347 Short-chain dehydrogenase/reductase SDR H5404_19310 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 H5404_19310 IPR006171 TOPRIM domain H5404_19310 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 H5404_19310 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 H5404_19310 IPR003602 DNA topoisomerase, type IA, DNA-binding domain H5404_19310 IPR013497 DNA topoisomerase, type IA, central H5404_19310 IPR005738 DNA topoisomerase III H5404_19310 IPR023406 DNA topoisomerase, type IA, active site H5404_19310 IPR003601 DNA topoisomerase, type IA, domain 2 H5404_19310 IPR034144 DNA topoisomerase 3-like, TOPRIM domain H5404_19310 IPR023405 DNA topoisomerase, type IA, core domain H5404_19310 IPR000380 DNA topoisomerase, type IA H5404_19315 IPR029479 Nitroreductase H5404_19315 IPR000415 Nitroreductase-like H5404_19315 IPR026021 Putative NAD(P)H nitroreductase YdjA-like H5404_19320 IPR013785 Aldolase-type TIM barrel H5404_19320 IPR023753 FAD/NAD(P)-binding domain H5404_19320 IPR036188 FAD/NAD(P)-binding domain superfamily H5404_19320 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal H5404_19325 IPR004635 Peptidase S49, SppA H5404_19325 IPR004634 Peptidase S49, protease IV H5404_19325 IPR002142 Peptidase S49 H5404_19325 IPR033854 Signal peptide peptidase A H5404_19325 IPR029045 ClpP/crotonase-like domain superfamily H5404_19330 IPR027473 L-asparaginase, C-terminal H5404_19330 IPR041725 Type I (cytosolic) L-asparaginase H5404_19330 IPR006033 Type I L-asparaginase family H5404_19330 IPR027474 L-asparaginase, N-terminal H5404_19330 IPR037152 L-asparaginase, N-terminal domain superfamily H5404_19330 IPR036152 Asparaginase/glutaminase-like superfamily H5404_19330 IPR006034 Asparaginase/glutaminase-like H5404_19330 IPR020827 Asparaginase/glutaminase, active site 1 H5404_19330 IPR027475 Asparaginase/glutaminase, active site 2 H5404_19330 IPR040919 Asparaginase/glutaminase, C-terminal H5404_19335 IPR009749 Protein of unknown function DUF1315 H5404_19345 IPR011057 Mss4-like superfamily H5404_19345 IPR002579 Peptide methionine sulphoxide reductase MrsB H5404_19345 IPR028427 Peptide methionine sulfoxide reductase H5404_19350 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family H5404_19350 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site H5404_19350 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain H5404_19350 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain H5404_19350 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I H5404_19350 IPR036291 NAD(P)-binding domain superfamily H5404_19360 IPR003660 HAMP domain H5404_19360 IPR033479 Double Cache domain 1 H5404_19360 IPR029151 Periplasmic sensor-like domain superfamily H5404_19360 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain H5404_19365 IPR025714 Methyltransferase domain H5404_19365 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_19365 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted H5404_19380 IPR018299 Alkaline phosphatase, active site H5404_19380 IPR017850 Alkaline-phosphatase-like, core domain superfamily H5404_19380 IPR001952 Alkaline phosphatase H5404_19390 IPR018146 Glyoxalase I, conserved site H5404_19390 IPR004361 Glyoxalase I H5404_19390 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase H5404_19390 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain H5404_19390 IPR037523 Vicinal oxygen chelate (VOC) domain H5404_19395 IPR007138 Antibiotic biosynthesis monooxygenase domain H5404_19395 IPR011008 Dimeric alpha-beta barrel H5404_19400 IPR006686 Mechanosensitive ion channel MscS, conserved site H5404_19400 IPR011066 Mechanosensitive ion channel MscS, C-terminal H5404_19400 IPR006685 Mechanosensitive ion channel MscS H5404_19400 IPR010920 LSM domain superfamily H5404_19400 IPR008910 Conserved TM helix H5404_19400 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 H5404_19400 IPR023408 Mechanosensitive ion channel MscS domain superfamily H5404_19405 IPR008228 Uncharacterised conserved protein UCP006173 H5404_19405 IPR005358 Putative zinc- or iron-chelating domain containing protein H5404_19410 IPR007341 Transglycosylase-associated protein H5404_19415 IPR005358 Putative zinc- or iron-chelating domain containing protein H5404_19425 IPR021144 Uncharacterised protein family UPF0597 H5404_19425 IPR005130 Serine dehydratase-like, alpha subunit H5404_19430 IPR006175 YjgF/YER057c/UK114 family H5404_19430 IPR019897 RidA, conserved site H5404_19430 IPR035959 RutC-like superfamily H5404_19430 IPR006056 RidA family H5404_19440 IPR023743 Aquaporin Z H5404_19440 IPR023271 Aquaporin-like H5404_19440 IPR034294 Aquaporin transporter H5404_19440 IPR022357 Major intrinsic protein, conserved site H5404_19440 IPR000425 Major intrinsic protein H5404_19445 IPR034137 RecR, TOPRIM domain H5404_19445 IPR023627 Recombination protein RecR H5404_19445 IPR023628 Recombination protein RecR, C4-type zinc finger H5404_19445 IPR015967 Recombination protein RecR, conserved site H5404_19445 IPR006171 TOPRIM domain H5404_19445 IPR000093 DNA recombination protein RecR H5404_19450 IPR004401 Nucleoid-associated protein YbaB/EbfC family H5404_19450 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily H5404_19455 IPR003593 AAA+ ATPase domain H5404_19455 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal H5404_19455 IPR021029 DNA polymerase III, tau subunit, domain V H5404_19455 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily H5404_19455 IPR012763 DNA polymerase III, subunit gamma/ tau H5404_19455 IPR022754 DNA polymerase III, gamma subunit, domain III H5404_19455 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV H5404_19455 IPR001270 ClpA/B family H5404_19455 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_19460 IPR000836 Phosphoribosyltransferase domain H5404_19460 IPR029057 Phosphoribosyltransferase-like H5404_19460 IPR005764 Adenine phosphoribosyl transferase H5404_19465 IPR007401 Protein of unknown function DUF454 H5404_19470 IPR001789 Signal transduction response regulator, receiver domain H5404_19470 IPR028616 Regulator of RpoS H5404_19470 IPR036457 PPM-type phosphatase domain superfamily H5404_19470 IPR011006 CheY-like superfamily H5404_19470 IPR039420 Transcriptional regulatory protein WalR-like H5404_19475 IPR005119 LysR, substrate-binding H5404_19475 IPR000847 Transcription regulator HTH, LysR H5404_19475 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_19475 IPR036390 Winged helix DNA-binding domain superfamily H5404_19480 IPR029055 Nucleophile aminohydrolases, N-terminal H5404_19480 IPR017932 Glutamine amidotransferase type 2 domain H5404_19480 IPR029057 Phosphoribosyltransferase-like H5404_19480 IPR000836 Phosphoribosyltransferase domain H5404_19480 IPR035584 Amidophosphoribosyltransferase, N-terminal H5404_19480 IPR005854 Amidophosphoribosyltransferase H5404_19485 IPR003825 Colicin V production, CvpA H5404_19490 IPR032898 Cell division protein DedD H5404_19490 IPR007730 Sporulation-like domain H5404_19490 IPR036680 Sporulation-like domain superfamily H5404_19495 IPR001645 Folylpolyglutamate synthetase H5404_19495 IPR018109 Folylpolyglutamate synthetase, conserved site H5404_19495 IPR036565 Mur-like, catalytic domain superfamily H5404_19495 IPR004101 Mur ligase, C-terminal H5404_19495 IPR036615 Mur ligase, C-terminal domain superfamily H5404_19495 IPR013221 Mur ligase, central H5404_19500 IPR041010 Acetyl-coA carboxylase zinc finger domain H5404_19500 IPR011762 Acetyl-coenzyme A carboxyltransferase, N-terminal H5404_19500 IPR029045 ClpP/crotonase-like domain superfamily H5404_19500 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit H5404_19500 IPR034733 Acetyl-CoA carboxylase H5404_19505 IPR020103 Pseudouridine synthase, catalytic domain superfamily H5404_19505 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain H5404_19505 IPR020095 Pseudouridine synthase I, TruA, C-terminal H5404_19505 IPR001406 Pseudouridine synthase I, TruA H5404_19515 IPR036291 NAD(P)-binding domain superfamily H5404_19515 IPR012280 Semialdehyde dehydrogenase, dimerisation domain H5404_19515 IPR000534 Semialdehyde dehydrogenase, NAD-binding H5404_19515 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site H5404_19515 IPR012080 Aspartate-semialdehyde dehydrogenase H5404_19515 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type H5404_19520 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain H5404_19520 IPR020921 Erythronate-4-phosphate dehydrogenase H5404_19520 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site H5404_19520 IPR038251 PdxB, dimerisation domain superfamily H5404_19520 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain H5404_19520 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H5404_19520 IPR036291 NAD(P)-binding domain superfamily H5404_19525 IPR016039 Thiolase-like H5404_19525 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain H5404_19525 IPR014030 Beta-ketoacyl synthase, N-terminal H5404_19525 IPR000794 Beta-ketoacyl synthase H5404_19525 IPR014031 Beta-ketoacyl synthase, C-terminal H5404_19525 IPR018201 Beta-ketoacyl synthase, active site H5404_19530 IPR006076 FAD dependent oxidoreductase H5404_19530 IPR036188 FAD/NAD(P)-binding domain superfamily H5404_19530 IPR008471 MnmC-like methyltransferase H5404_19530 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC H5404_19530 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal H5404_19535 IPR029039 Flavoprotein-like superfamily H5404_19535 IPR005025 NADPH-dependent FMN reductase-like H5404_19540 IPR014987 Uncharacterised protein family YfcL H5404_19545 IPR007411 Elongation factor P hydroxylase H5404_19550 IPR005115 Uncharacterised domain UPF0126 H5404_19555 IPR000453 Chorismate synthase H5404_19555 IPR035904 Chorismate synthase AroC superfamily H5404_19555 IPR020541 Chorismate synthase, conserved site H5404_19560 IPR002052 DNA methylase, N-6 adenine-specific, conserved site H5404_19560 IPR004556 Methyltransferase HemK-like H5404_19560 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_19560 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase H5404_19560 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific H5404_19560 IPR007848 Methyltransferase small domain H5404_19565 IPR002625 Smr domain H5404_19565 IPR022990 Uncharacterised protein family UPF0115 H5404_19565 IPR036063 Smr domain superfamily H5404_19570 IPR004449 Phosphohistidine phosphatase SixA H5404_19570 IPR029033 Histidine phosphatase superfamily H5404_19570 IPR013078 Histidine phosphatase superfamily, clade-1 H5404_19575 IPR007863 Peptidase M16, C-terminal H5404_19575 IPR011765 Peptidase M16, N-terminal H5404_19575 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like H5404_19575 IPR001431 Peptidase M16, zinc-binding site H5404_19575 IPR032632 Peptidase M16, middle/third domain H5404_19585 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal H5404_19585 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily H5404_19585 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site H5404_19585 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding H5404_19585 IPR001753 Enoyl-CoA hydratase/isomerase H5404_19585 IPR012802 Fatty oxidation complex, alpha subunit FadJ H5404_19585 IPR029045 ClpP/crotonase-like domain superfamily H5404_19585 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site H5404_19585 IPR036291 NAD(P)-binding domain superfamily H5404_19590 IPR016039 Thiolase-like H5404_19590 IPR020617 Thiolase, C-terminal H5404_19590 IPR020613 Thiolase, conserved site H5404_19590 IPR012806 Acetyl-CoA C-acyltransferase FadI H5404_19590 IPR002155 Thiolase H5404_19590 IPR020616 Thiolase, N-terminal H5404_19595 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site H5404_19595 IPR039425 RNA polymerase sigma-70 like H5404_19595 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_19595 IPR007627 RNA polymerase sigma-70 region 2 H5404_19595 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 H5404_19595 IPR013325 RNA polymerase sigma factor, region 2 H5404_19595 IPR014284 RNA polymerase sigma-70 like domain H5404_19595 IPR013324 RNA polymerase sigma factor, region 3/4-like H5404_19605 IPR042117 OMPP1/FadL/TodX superfamily H5404_19605 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) H5404_19610 IPR042117 OMPP1/FadL/TodX superfamily H5404_19610 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) H5404_19615 IPR007428 MlaA lipoprotein H5404_19625 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily H5404_19625 IPR011990 Tetratricopeptide-like helical domain superfamily H5404_19625 IPR005616 CcmH/CycL/Ccl2/NrfF family H5404_19625 IPR013026 Tetratricopeptide repeat-containing domain H5404_19625 IPR017560 Cytochrome c-type biogenesis protein CcmI H5404_19625 IPR019734 Tetratricopeptide repeat H5404_19630 IPR017937 Thioredoxin, conserved site H5404_19630 IPR036249 Thioredoxin-like superfamily H5404_19630 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE H5404_19630 IPR013740 Redoxin H5404_19630 IPR013766 Thioredoxin domain H5404_19635 IPR002541 Cytochrome c assembly protein H5404_19635 IPR003567 Cytochrome c-type biogenesis protein H5404_19635 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal H5404_19635 IPR003568 Cytochrome c-type biogenesis protein CcmF H5404_19640 IPR004329 CcmE/CycJ protein H5404_19640 IPR036127 CcmE-like superfamily H5404_19645 IPR007078 Haem exporter protein D (CcmD) H5404_19650 IPR003557 Cytochrome c-type biogenesis protein CcmC H5404_19650 IPR002541 Cytochrome c assembly protein H5404_19655 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria H5404_19655 IPR003544 Cytochrome c-type biogenesis protein CcmB H5404_19660 IPR005895 ABC transporter, haem export, CcmA H5404_19660 IPR017871 ABC transporter, conserved site H5404_19660 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_19660 IPR003439 ABC transporter-like H5404_19660 IPR003593 AAA+ ATPase domain H5404_19670 IPR036061 CheW-like domain superfamily H5404_19670 IPR002545 CheW-like domain H5404_19670 IPR039315 Chemotaxis protein CheW H5404_19680 IPR025669 AAA domain H5404_19680 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_19685 IPR001789 Signal transduction response regulator, receiver domain H5404_19685 IPR008248 Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type H5404_19685 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase H5404_19685 IPR035909 Methylesterase CheB, C-terminal H5404_19685 IPR011006 CheY-like superfamily H5404_19690 IPR004105 Histidine kinase CheA-like, homodimeric domain H5404_19690 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily H5404_19690 IPR036061 CheW-like domain superfamily H5404_19690 IPR002545 CheW-like domain H5404_19690 IPR011006 CheY-like superfamily H5404_19690 IPR003594 Histidine kinase/HSP90-like ATPase H5404_19690 IPR001789 Signal transduction response regulator, receiver domain H5404_19690 IPR005467 Histidine kinase domain H5404_19690 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily H5404_19690 IPR036641 HPT domain superfamily H5404_19690 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_19690 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain H5404_19690 IPR004358 Signal transduction histidine kinase-related protein, C-terminal H5404_19695 IPR007439 Chemotaxis phosphatase, CheZ H5404_19700 IPR011006 CheY-like superfamily H5404_19700 IPR001789 Signal transduction response regulator, receiver domain H5404_19705 IPR012845 RNA polymerase sigma factor, FliA/WhiG H5404_19705 IPR014284 RNA polymerase sigma-70 like domain H5404_19705 IPR007627 RNA polymerase sigma-70 region 2 H5404_19705 IPR000943 RNA polymerase sigma-70 H5404_19705 IPR028617 RNA polymerase sigma factor FliA H5404_19705 IPR013324 RNA polymerase sigma factor, region 3/4-like H5404_19705 IPR013325 RNA polymerase sigma factor, region 2 H5404_19705 IPR007630 RNA polymerase sigma-70 region 4 H5404_19705 IPR007624 RNA polymerase sigma-70 region 3 H5404_19710 IPR025501 ATP binding protein MinD H5404_19710 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_19710 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 H5404_19715 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain H5404_19715 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_19715 IPR020006 Flagellar biosynthesis protein FlhF H5404_19715 IPR003593 AAA+ ATPase domain H5404_19720 IPR006301 Flagellar biosynthesis protein FlhA H5404_19720 IPR001712 Type III secretion system FHIPEP H5404_19720 IPR042194 FHIPEP, domain 1 H5404_19720 IPR042193 FHIPEP, domain 3 H5404_19720 IPR025505 FHIPEP conserved site H5404_19720 IPR042196 FHIPEP, domain 4 H5404_19725 IPR006136 Flagellar biosynthetic protein FlhB H5404_19725 IPR006135 Type III secretion system substrate exporter H5404_19725 IPR029025 Type III secretion system substrate exporter, C-terminal H5404_19730 IPR002010 Type III secretion system inner membrane R protein H5404_19730 IPR006303 Flagellar biosynthesis protein FliR H5404_19735 IPR006305 Flagellar biosynthesis protein FliQ H5404_19735 IPR002191 Bacterial export protein family 3 H5404_19740 IPR005837 Flagellar transport protein FliP H5404_19740 IPR005838 Type III secretion system inner membrane P protein H5404_19745 IPR022781 Flagellar biosynthesis protein, FliO H5404_19750 IPR001543 Surface presentation of antigen (SpoA) H5404_19750 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb H5404_19750 IPR012826 Flagellar motor switch FliN H5404_19750 IPR036429 SpoA-like superfamily H5404_19755 IPR028976 CheC-like superfamily H5404_19755 IPR001689 Flagellar motor switch protein FliM H5404_19755 IPR001543 Surface presentation of antigen (SpoA) H5404_19755 IPR036429 SpoA-like superfamily H5404_19775 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain H5404_19775 IPR040627 T3SS EscN ATPase, C-terminal H5404_19775 IPR032463 ATPase, type III secretion system, FliI H5404_19775 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_19775 IPR005714 ATPase, type III secretion system, FliI/YscN H5404_19775 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site H5404_19775 IPR020005 Flagellar export ATPase FliI, clade 1 H5404_19775 IPR003593 AAA+ ATPase domain H5404_19785 IPR032779 Flagellar motor switch protein FliG, middle domain H5404_19785 IPR000090 Flagellar motor switch protein FliG H5404_19785 IPR023087 Flagellar motor switch protein FliG, C-terminal H5404_19785 IPR011002 Flagellar motor switch protein FliG, alpha-helical H5404_19785 IPR028263 Flagellar motor switch protein FliG, N-terminal domain H5404_19790 IPR000067 Flagellar M-ring protein FliF H5404_19790 IPR013556 Flagellar M-ring C-terminal H5404_19790 IPR006182 Secretory protein YscJ/FliF H5404_19795 IPR001624 Flagellar hook-basal body complex protein FliE H5404_19800 IPR002197 DNA binding HTH domain, Fis-type H5404_19800 IPR011006 CheY-like superfamily H5404_19800 IPR003593 AAA+ ATPase domain H5404_19800 IPR009057 Homeobox-like domain superfamily H5404_19800 IPR029995 Transcriptional activator SfnR/FlbD H5404_19800 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_19800 IPR025944 Sigma-54 interaction domain, conserved site H5404_19800 IPR001789 Signal transduction response regulator, receiver domain H5404_19800 IPR002078 RNA polymerase sigma factor 54 interaction domain H5404_19800 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 H5404_19800 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 H5404_19805 IPR004358 Signal transduction histidine kinase-related protein, C-terminal H5404_19805 IPR035965 PAS domain superfamily H5404_19805 IPR005467 Histidine kinase domain H5404_19805 IPR000014 PAS domain H5404_19805 IPR003594 Histidine kinase/HSP90-like ATPase H5404_19805 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily H5404_19805 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_19805 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain H5404_19810 IPR011006 CheY-like superfamily H5404_19810 IPR003593 AAA+ ATPase domain H5404_19810 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_19810 IPR002078 RNA polymerase sigma factor 54 interaction domain H5404_19810 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 H5404_19810 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 H5404_19810 IPR025944 Sigma-54 interaction domain, conserved site H5404_19810 IPR010518 Flagellar regulatory FleQ H5404_19810 IPR009057 Homeobox-like domain superfamily H5404_19810 IPR002197 DNA binding HTH domain, Fis-type H5404_19815 IPR036584 Flagellar protein FliS superfamily H5404_19815 IPR003713 Flagellar protein FliS H5404_19825 IPR010810 Flagellin hook, IN motif H5404_19825 IPR040026 Flagellar hook-associated protein 2 H5404_19825 IPR010809 Flagellar hook-associated protein 2, C-terminal H5404_19825 IPR003481 Flagellar hook-associated protein 2, N-terminal H5404_19830 IPR035924 FlaG-like superfamily H5404_19830 IPR005186 FlaG protein H5404_19835 IPR001029 Flagellin, D0/D1 domain H5404_19835 IPR042187 Flagellin, C-terminal domain, subdomain 2 H5404_19835 IPR001492 Flagellin H5404_19835 IPR010810 Flagellin hook, IN motif H5404_19840 IPR010810 Flagellin hook, IN motif H5404_19840 IPR001029 Flagellin, D0/D1 domain H5404_19840 IPR042187 Flagellin, C-terminal domain, subdomain 2 H5404_19840 IPR001492 Flagellin H5404_19845 IPR042187 Flagellin, C-terminal domain, subdomain 2 H5404_19845 IPR010810 Flagellin hook, IN motif H5404_19845 IPR001492 Flagellin H5404_19845 IPR001029 Flagellin, D0/D1 domain H5404_19850 IPR002559 Transposase, IS4-like H5404_19850 IPR014735 Transposase, Tn5-like, N-terminal H5404_19850 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily H5404_19850 IPR003201 Transposase Tn5, dimerisation H5404_19850 IPR012337 Ribonuclease H-like superfamily H5404_19850 IPR014737 Transposase, Tn5-like, C-terminal H5404_19850 IPR014736 Transposase, Tn5-like, core H5404_19855 IPR006314 Dyp-type peroxidase H5404_19855 IPR011008 Dimeric alpha-beta barrel H5404_19860 IPR021318 Protein of unknown function DUF2919 H5404_19880 IPR006504 Transcriptional regulator Spx/MgsR H5404_19880 IPR036249 Thioredoxin-like superfamily H5404_19880 IPR006660 Arsenate reductase-like H5404_19885 IPR011650 Peptidase M20, dimerisation domain H5404_19885 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site H5404_19885 IPR002933 Peptidase M20 H5404_19885 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria H5404_19885 IPR036264 Bacterial exopeptidase dimerisation domain H5404_19900 IPR010653 NlpB/DapX lipoprotein H5404_19900 IPR042268 Outer membrane protein assembly factor BamC, C-terminal H5404_19900 IPR014524 Outer membrane protein assembly factor BamC H5404_19905 IPR020624 Schiff base-forming aldolase, conserved site H5404_19905 IPR020625 Schiff base-forming aldolase, active site H5404_19905 IPR002220 DapA-like H5404_19905 IPR013785 Aldolase-type TIM barrel H5404_19905 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA H5404_19910 IPR002912 ACT domain H5404_19910 IPR016867 Glycine cleavage system transcriptional repressor H5404_19915 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant H5404_19915 IPR036249 Thioredoxin-like superfamily H5404_19915 IPR013766 Thioredoxin domain H5404_19920 IPR002549 Transmembrane protein TqsA-like H5404_19930 IPR001915 Peptidase M48 H5404_19930 IPR030873 Beta-barrel assembly-enhancing protease H5404_19930 IPR013026 Tetratricopeptide repeat-containing domain H5404_19930 IPR019734 Tetratricopeptide repeat H5404_19930 IPR011990 Tetratricopeptide-like helical domain superfamily H5404_19935 IPR036249 Thioredoxin-like superfamily H5404_19935 IPR006659 Arsenate reductase H5404_19935 IPR006660 Arsenate reductase-like H5404_19940 IPR001226 Flavodoxin, conserved site H5404_19940 IPR029039 Flavoprotein-like superfamily H5404_19940 IPR005025 NADPH-dependent FMN reductase-like H5404_19940 IPR010089 Flavoprotein WrbA-like H5404_19940 IPR008254 Flavodoxin/nitric oxide synthase H5404_19955 IPR029935 Uracil permease H5404_19955 IPR006043 Xanthine/uracil/vitamin C permease H5404_19955 IPR006042 Xanthine/uracil permease H5404_19960 IPR005765 Uracil phosphoribosyl transferase H5404_19960 IPR029057 Phosphoribosyltransferase-like H5404_19960 IPR000836 Phosphoribosyltransferase domain H5404_19960 IPR034332 Uracil phosphoribosyltransferase, bacterial-type H5404_19965 IPR036921 PurM-like, N-terminal domain superfamily H5404_19965 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase H5404_19965 IPR036676 PurM-like, C-terminal domain superfamily H5404_19965 IPR016188 PurM-like, N-terminal domain H5404_19965 IPR010918 PurM-like, C-terminal domain H5404_19970 IPR004607 Phosphoribosylglycinamide formyltransferase H5404_19970 IPR001555 Phosphoribosylglycinamide formyltransferase, active site H5404_19970 IPR002376 Formyl transferase, N-terminal H5404_19970 IPR036477 Formyl transferase, N-terminal domain superfamily H5404_19975 IPR026869 Putative glutamine amidotransferase type 2 H5404_19975 IPR029055 Nucleophile aminohydrolases, N-terminal H5404_19975 IPR017932 Glutamine amidotransferase type 2 domain H5404_19980 IPR001347 Sugar isomerase (SIS) H5404_19980 IPR004515 Phosphoheptose isomerase H5404_19980 IPR035461 GmhA/DiaA H5404_19985 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain H5404_19985 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal H5404_19985 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily H5404_19985 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal H5404_19985 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily H5404_19985 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type H5404_19985 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal H5404_19990 IPR036513 STAS domain superfamily H5404_19990 IPR002645 STAS domain H5404_19990 IPR011547 SLC26A/SulP transporter domain H5404_19990 IPR001902 SLC26A/SulP transporter H5404_19995 IPR016181 Acyl-CoA N-acyltransferase H5404_19995 IPR000182 GNAT domain H5404_19995 IPR006464 N-acetyltransferase RimI/Ard1 H5404_20015 IPR036397 Ribonuclease H superfamily H5404_20015 IPR012337 Ribonuclease H-like superfamily H5404_20015 IPR013520 Exonuclease, RNase T/DNA polymerase III H5404_20015 IPR006309 DNA polymerase 3, epsilon subunit H5404_20015 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain H5404_20020 IPR002156 Ribonuclease H domain H5404_20020 IPR036397 Ribonuclease H superfamily H5404_20020 IPR022892 Ribonuclease HI H5404_20020 IPR012337 Ribonuclease H-like superfamily H5404_20025 IPR026669 Arsenite methyltransferase-like H5404_20025 IPR013216 Methyltransferase type 11 H5404_20025 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_20030 IPR035680 Hydroxyacylglutathione hydrolase, MBL domain H5404_20030 IPR017782 Hydroxyacylglutathione hydrolase H5404_20030 IPR001279 Metallo-beta-lactamase H5404_20030 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like H5404_20030 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain H5404_20035 IPR000189 Prokaryotic transglycosylase, active site H5404_20035 IPR023346 Lysozyme-like domain superfamily H5404_20035 IPR036779 LysM domain superfamily H5404_20035 IPR018392 LysM domain H5404_20035 IPR008258 Transglycosylase SLT domain 1 H5404_20045 IPR022958 Uncharacterised protein family UPF0294 H5404_20045 IPR036691 Endonuclease/exonuclease/phosphatase superfamily H5404_20045 IPR005135 Endonuclease/exonuclease/phosphatase H5404_20050 IPR002187 Nitrogen regulatory protein PII H5404_20050 IPR011322 Nitrogen regulatory PII-like, alpha/beta H5404_20050 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal H5404_20050 IPR017918 Nitrogen regulatory protein PII, conserved site H5404_20050 IPR002332 Nitrogen regulatory protein P-II, urydylation site H5404_20055 IPR009056 Cytochrome c-like domain H5404_20055 IPR008168 Cytochrome c, class IC H5404_20055 IPR036909 Cytochrome c-like domain superfamily H5404_20060 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain H5404_20060 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold H5404_20060 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal H5404_20060 IPR012094 tRNA(Ile)-lysidine synthase H5404_20060 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal H5404_20060 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal H5404_20065 IPR001095 Acetyl-CoA carboxylase, alpha subunit H5404_20065 IPR029045 ClpP/crotonase-like domain superfamily H5404_20065 IPR011763 Acetyl-coenzyme A carboxyltransferase, C-terminal H5404_20070 IPR004013 PHP domain H5404_20070 IPR003141 Polymerase/histidinol phosphatase, N-terminal H5404_20070 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type H5404_20070 IPR029460 DNA polymerase, helix-hairpin-helix motif H5404_20070 IPR041931 Bacterial DNA polymerase III alpha subunit, thumb domain H5404_20070 IPR040982 DNA polymerase III alpha subunit finger domain H5404_20070 IPR004805 DNA polymerase III, alpha subunit H5404_20070 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain H5404_20070 IPR016195 Polymerase/histidinol phosphatase-like H5404_20075 IPR036397 Ribonuclease H superfamily H5404_20075 IPR012337 Ribonuclease H-like superfamily H5404_20075 IPR001352 Ribonuclease HII/HIII H5404_20075 IPR024567 Ribonuclease HII/HIII domain H5404_20075 IPR022898 Ribonuclease HII H5404_20080 IPR003835 Glycosyl transferase, family 19 H5404_20085 IPR011004 Trimeric LpxA-like superfamily H5404_20085 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily H5404_20085 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal H5404_20085 IPR001451 Hexapeptide repeat H5404_20085 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase H5404_20090 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ H5404_20090 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ H5404_20090 IPR029069 HotDog domain superfamily H5404_20095 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region H5404_20095 IPR011004 Trimeric LpxA-like superfamily H5404_20095 IPR001451 Hexapeptide repeat H5404_20095 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD H5404_20100 IPR005632 Chaperone protein Skp H5404_20100 IPR024930 Skp domain superfamily H5404_20105 IPR010827 POTRA domain, BamA/TamA-like H5404_20105 IPR034746 POTRA domain H5404_20105 IPR023707 Outer membrane protein assembly factor BamA H5404_20105 IPR039910 Surface antigen D15-like H5404_20105 IPR000184 Bacterial surface antigen (D15) H5404_20110 IPR036034 PDZ superfamily H5404_20110 IPR008915 Peptidase M50 H5404_20110 IPR041489 PDZ domain 6 H5404_20110 IPR001478 PDZ domain H5404_20110 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase H5404_20115 IPR036169 DXP reductoisomerase, C-terminal domain superfamily H5404_20115 IPR026877 DXP reductoisomerase C-terminal domain H5404_20115 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal H5404_20115 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal H5404_20115 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase H5404_20115 IPR036291 NAD(P)-binding domain superfamily H5404_20120 IPR000374 Phosphatidate cytidylyltransferase H5404_20125 IPR036424 Decaprenyl diphosphate synthase-like superfamily H5404_20125 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site H5404_20125 IPR001441 Decaprenyl diphosphate synthase-like H5404_20130 IPR036191 RRF superfamily H5404_20130 IPR023584 Ribosome recycling factor domain H5404_20130 IPR002661 Ribosome recycling factor H5404_20135 IPR015963 Uridylate kinase, bacteria H5404_20135 IPR011817 Uridylate kinase H5404_20135 IPR001048 Aspartate/glutamate/uridylate kinase H5404_20135 IPR036393 Acetylglutamate kinase-like superfamily H5404_20140 IPR001816 Translation elongation factor EFTs/EF1B H5404_20140 IPR018101 Translation elongation factor Ts, conserved site H5404_20140 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation H5404_20140 IPR009060 UBA-like superfamily H5404_20140 IPR036402 Elongation factor Ts, dimerisation domain superfamily H5404_20145 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily H5404_20145 IPR018130 Ribosomal protein S2, conserved site H5404_20145 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid H5404_20145 IPR001865 Ribosomal protein S2 H5404_20150 IPR001714 Peptidase M24, methionine aminopeptidase H5404_20150 IPR000994 Peptidase M24 H5404_20150 IPR036005 Creatinase/aminopeptidase-like H5404_20150 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 H5404_20155 IPR002934 Polymerase, nucleotidyl transferase domain H5404_20155 IPR003607 HD/PDEase domain H5404_20155 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase H5404_20155 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme H5404_20155 IPR006674 HD domain H5404_20155 IPR002912 ACT domain H5404_20160 IPR020911 Uncharacterised protein family UPF0325 H5404_20165 IPR020103 Pseudouridine synthase, catalytic domain superfamily H5404_20165 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site H5404_20165 IPR006145 Pseudouridine synthase, RsuA/RluA H5404_20170 IPR036814 YqcC-like superfamily H5404_20170 IPR007384 Protein of unknown function UCP006257 H5404_20170 IPR023376 YqcC-like domain H5404_20195 IPR003791 Protein of unknown function UPF0178 H5404_20200 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT H5404_20200 IPR011540 AbgT, Proteobacteria H5404_20205 IPR000473 Ribosomal protein L36 H5404_20205 IPR035977 Ribosomal protein L36 superfamily H5404_20210 IPR027493 Ribosomal protein L31 type B H5404_20210 IPR002150 Ribosomal protein L31 H5404_20210 IPR034704 L28p-like H5404_20210 IPR042105 Ribosomal protein L31 superfamily H5404_20215 IPR023370 TrmO-like, N-terminal domain H5404_20215 IPR023368 Uncharacterised protein family UPF0066, conserved site H5404_20215 IPR040372 YaeB-like H5404_20215 IPR036413 YaeB-like superfamily H5404_20215 IPR036414 YaeB, N-terminal domain superfamily H5404_20215 IPR041369 TrmO, C-terminal H5404_20220 IPR006195 Aminoacyl-tRNA synthetase, class II H5404_20220 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) H5404_20220 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain H5404_20220 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily H5404_20220 IPR033730 Prokaryote proline-tRNA ligase core domain H5404_20220 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 H5404_20220 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type H5404_20220 IPR036621 Anticodon-binding domain superfamily H5404_20220 IPR004154 Anticodon-binding H5404_20220 IPR002316 Proline-tRNA ligase, class IIa H5404_20230 IPR009624 Uncharacterised protein family UPF0253 H5404_20240 IPR000175 Sodium:neurotransmitter symporter H5404_20240 IPR037272 Sodium:neurotransmitter symporter superfamily H5404_20255 IPR018151 Transcription elongation factor, GreA/GreB, conserved site H5404_20255 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal H5404_20255 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily H5404_20255 IPR023459 Transcription elongation factor GreA/GreB family H5404_20255 IPR028624 Transcription elongation factor GreA/GreB H5404_20255 IPR006359 Transcription elongation factor GreA H5404_20255 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal H5404_20255 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily H5404_20260 IPR018982 RQC domain H5404_20260 IPR010997 HRDC-like superfamily H5404_20260 IPR002121 HRDC domain H5404_20260 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_20260 IPR014001 Helicase superfamily 1/2, ATP-binding domain H5404_20260 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_20260 IPR004589 DNA helicase, ATP-dependent, RecQ type H5404_20260 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial H5404_20260 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain H5404_20260 IPR011545 DEAD/DEAH box helicase domain H5404_20260 IPR001650 Helicase, C-terminal H5404_20265 IPR001126 UmuC domain H5404_20265 IPR036775 DNA polymerase, Y-family, little finger domain superfamily H5404_20265 IPR022880 DNA polymerase IV H5404_20265 IPR017961 DNA polymerase, Y-family, little finger domain H5404_20265 IPR024728 DNA polymerase type-Y, HhH motif H5404_20280 IPR003374 ApbE-like superfamily H5404_20280 IPR024932 Flavin transferase ApbE H5404_20280 IPR042159 Flavin-trafficking protein ApbE H5404_20285 IPR001433 Oxidoreductase FAD/NAD(P)-binding H5404_20285 IPR017938 Riboflavin synthase-like beta-barrel H5404_20285 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain H5404_20285 IPR017927 FAD-binding domain, ferredoxin reductase-type H5404_20285 IPR012675 Beta-grasp domain superfamily H5404_20285 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain H5404_20285 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F H5404_20285 IPR036010 2Fe-2S ferredoxin-like superfamily H5404_20285 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase H5404_20285 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain H5404_20290 IPR003667 NqrDE/RnfAE H5404_20290 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E H5404_20295 IPR003667 NqrDE/RnfAE H5404_20295 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D H5404_20300 IPR007329 FMN-binding H5404_20300 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C H5404_20305 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B H5404_20305 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD H5404_20310 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain H5404_20310 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A H5404_20315 IPR002634 BolA protein H5404_20315 IPR036065 BolA-like superfamily H5404_20320 IPR007848 Methyltransferase small domain H5404_20320 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_20320 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD H5404_20325 IPR005619 Uncharacterised protein family, YajG H5404_20325 IPR012640 Membrane lipoprotein, lipid attachment site H5404_20330 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain H5404_20330 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site H5404_20330 IPR029000 Cyclophilin-like domain superfamily H5404_20335 IPR011701 Major facilitator superfamily H5404_20335 IPR036259 MFS transporter superfamily H5404_20335 IPR020846 Major facilitator superfamily domain H5404_20335 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 H5404_20345 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_20345 IPR039425 RNA polymerase sigma-70 like H5404_20345 IPR014284 RNA polymerase sigma-70 like domain H5404_20345 IPR007627 RNA polymerase sigma-70 region 2 H5404_20345 IPR007630 RNA polymerase sigma-70 region 4 H5404_20345 IPR013325 RNA polymerase sigma factor, region 2 H5404_20345 IPR013324 RNA polymerase sigma factor, region 3/4-like H5404_20360 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily H5404_20360 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like H5404_20365 IPR036291 NAD(P)-binding domain superfamily H5404_20365 IPR013332 Ketopantoate reductase, N-terminal domain H5404_20365 IPR013752 Ketopantoate reductase, C-terminal domain H5404_20365 IPR003710 Ketopantoate reductase ApbA/PanE H5404_20365 IPR013328 6-phosphogluconate dehydrogenase, domain 2 H5404_20365 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily H5404_20370 IPR006287 Protein/nucleic acid deglycase DJ-1 H5404_20370 IPR029062 Class I glutamine amidotransferase-like H5404_20370 IPR002818 DJ-1/PfpI H5404_20375 IPR000192 Aminotransferase class V domain H5404_20375 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA H5404_20375 IPR010970 Cysteine desulfurase, SufS H5404_20375 IPR016454 Cysteine desulfurase H5404_20375 IPR015424 Pyridoxal phosphate-dependent transferase H5404_20375 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 H5404_20375 IPR015421 Pyridoxal phosphate-dependent transferase, major domain H5404_20380 IPR000160 GGDEF domain H5404_20380 IPR033424 Membrane-associated sensor domain H5404_20380 IPR029787 Nucleotide cyclase H5404_20385 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE H5404_20385 IPR003808 Fe-S metabolism associated domain, SufE-like H5404_20390 IPR035985 Ubiquitin-activating enzyme H5404_20390 IPR000594 THIF-type NAD/FAD binding fold H5404_20395 IPR005300 Lytic transglycosylase MltA, domain B H5404_20395 IPR010611 3D domain H5404_20395 IPR026044 Membrane-bound lytic murein transglycosylase A H5404_20395 IPR034654 MltA, 3D domain H5404_20395 IPR036908 RlpA-like domain superfamily H5404_20405 IPR036393 Acetylglutamate kinase-like superfamily H5404_20405 IPR016181 Acyl-CoA N-acyltransferase H5404_20405 IPR001048 Aspartate/glutamate/uridylate kinase H5404_20405 IPR000182 GNAT domain H5404_20405 IPR033719 N-acetylglutamate synthase, kinase-like domain H5404_20405 IPR010167 Amino-acid N-acetyltransferase H5404_20415 IPR003593 AAA+ ATPase domain H5404_20415 IPR006344 RecBCD enzyme subunit RecD H5404_20415 IPR041851 RecBCD enzyme subunit RecD, N-terminal domain H5404_20415 IPR027785 UvrD-like helicase C-terminal domain H5404_20415 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_20420 IPR014016 UvrD-like helicase, ATP-binding domain H5404_20420 IPR014017 UvrD-like DNA helicase, C-terminal H5404_20420 IPR034739 UvrD/AddA helicase, N-terminal H5404_20420 IPR011335 Restriction endonuclease type II-like H5404_20420 IPR000212 DNA helicase, UvrD/REP type H5404_20420 IPR011604 Exonuclease, phage-type/RecB, C-terminal H5404_20420 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_20420 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type H5404_20420 IPR004586 RecBCD enzyme subunit RecB H5404_20425 IPR013986 DExx box DNA helicase domain superfamily H5404_20425 IPR006697 RecBCD enzyme subunit RecC H5404_20425 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_20425 IPR041500 RecC, C-terminal H5404_20425 IPR011335 Restriction endonuclease type II-like H5404_20430 IPR012159 Inner membrane protein YejM H5404_20430 IPR017850 Alkaline-phosphatase-like, core domain superfamily H5404_20430 IPR000917 Sulfatase, N-terminal H5404_20430 IPR024588 Inner membrane protein YejM, N-terminal H5404_20440 IPR000847 Transcription regulator HTH, LysR H5404_20440 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_20440 IPR036390 Winged helix DNA-binding domain superfamily H5404_20440 IPR005119 LysR, substrate-binding H5404_20445 IPR009813 Uncharacterised protein family YebG H5404_20445 IPR038627 YebG-like superfamily H5404_20450 IPR011004 Trimeric LpxA-like superfamily H5404_20450 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily H5404_20450 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain H5404_20450 IPR001451 Hexapeptide repeat H5404_20450 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria H5404_20450 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family H5404_20455 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily H5404_20455 IPR030395 Glycerophosphodiester phosphodiesterase domain H5404_20460 IPR036259 MFS transporter superfamily H5404_20460 IPR020846 Major facilitator superfamily domain H5404_20460 IPR021159 Glycerate/sugar phosphate transporter, conserved site H5404_20460 IPR011701 Major facilitator superfamily H5404_20460 IPR000849 Sugar phosphate transporter H5404_20460 IPR005267 Glycerol-3-phosphate transporter H5404_20465 IPR022357 Major intrinsic protein, conserved site H5404_20465 IPR000425 Major intrinsic protein H5404_20465 IPR023271 Aquaporin-like H5404_20470 IPR018483 Carbohydrate kinase, FGGY, conserved site H5404_20470 IPR018485 Carbohydrate kinase, FGGY, C-terminal H5404_20470 IPR000577 Carbohydrate kinase, FGGY H5404_20470 IPR005999 Glycerol kinase H5404_20470 IPR018484 Carbohydrate kinase, FGGY, N-terminal H5404_20475 IPR001034 DeoR-type HTH domain H5404_20475 IPR014036 DeoR C-terminal sensor domain H5404_20475 IPR037171 NagB/RpiA transferase-like H5404_20475 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_20475 IPR036390 Winged helix DNA-binding domain superfamily H5404_20475 IPR018356 Transcription regulator, HTH DeoR-type, conserved site H5404_20480 IPR031656 Alpha-glycerophosphate oxidase, C-terminal H5404_20480 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily H5404_20480 IPR006076 FAD dependent oxidoreductase H5404_20480 IPR036188 FAD/NAD(P)-binding domain superfamily H5404_20480 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase H5404_20485 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB H5404_20485 IPR023714 Zinc transport protein ZntB H5404_20505 IPR012340 Nucleic acid-binding, OB-fold H5404_20505 IPR002547 tRNA-binding domain H5404_20510 IPR028082 Periplasmic binding protein-like I H5404_20510 IPR000843 LacI-type HTH domain H5404_20510 IPR010982 Lambda repressor-like, DNA-binding domain superfamily H5404_20515 IPR011708 Bacterial DNA polymerase III, alpha subunit, NTPase domain H5404_20515 IPR036397 Ribonuclease H superfamily H5404_20515 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type H5404_20515 IPR003141 Polymerase/histidinol phosphatase, N-terminal H5404_20515 IPR012337 Ribonuclease H-like superfamily H5404_20515 IPR013520 Exonuclease, RNase T/DNA polymerase III H5404_20515 IPR004013 PHP domain H5404_20515 IPR040982 DNA polymerase III alpha subunit finger domain H5404_20515 IPR029460 DNA polymerase, helix-hairpin-helix motif H5404_20515 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain H5404_20525 IPR018212 Sodium/solute symporter, conserved site H5404_20525 IPR038377 Sodium/glucose symporter superfamily H5404_20525 IPR001734 Sodium/solute symporter H5404_20530 IPR011013 Galactose mutarotase-like domain superfamily H5404_20530 IPR014718 Glycoside hydrolase-type carbohydrate-binding H5404_20530 IPR015443 Aldose 1-epimerase H5404_20530 IPR013458 Aldose 1-epimerase, bacterial H5404_20530 IPR018052 Aldose 1-epimerase, conserved site H5404_20530 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase H5404_20535 IPR019539 Galactokinase galactose-binding domain H5404_20535 IPR019741 Galactokinase, conserved site H5404_20535 IPR013750 GHMP kinase, C-terminal domain H5404_20535 IPR020568 Ribosomal protein S5 domain 2-type fold H5404_20535 IPR036554 GHMP kinase, C-terminal domain superfamily H5404_20535 IPR006204 GHMP kinase N-terminal domain H5404_20535 IPR006203 GHMP kinase, ATP-binding, conserved site H5404_20535 IPR006206 Mevalonate/galactokinase H5404_20535 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup H5404_20535 IPR022963 Galactokinase, bacterial H5404_20535 IPR000705 Galactokinase H5404_20540 IPR036265 HIT-like superfamily H5404_20540 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal H5404_20540 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal H5404_20540 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site H5404_20540 IPR001937 Galactose-1-phosphate uridyl transferase, class I H5404_20545 IPR036291 NAD(P)-binding domain superfamily H5404_20545 IPR005886 UDP-glucose 4-epimerase H5404_20545 IPR016040 NAD(P)-binding domain H5404_20550 IPR028082 Periplasmic binding protein-like I H5404_20550 IPR010982 Lambda repressor-like, DNA-binding domain superfamily H5404_20550 IPR000843 LacI-type HTH domain H5404_20555 IPR006101 Glycoside hydrolase, family 2 H5404_20555 IPR014718 Glycoside hydrolase-type carbohydrate-binding H5404_20555 IPR011013 Galactose mutarotase-like domain superfamily H5404_20555 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily H5404_20555 IPR004199 Beta galactosidase small chain/ domain 5 H5404_20555 IPR017853 Glycoside hydrolase superfamily H5404_20555 IPR032312 Beta-galactosidase, domain 4 H5404_20555 IPR008979 Galactose-binding-like domain superfamily H5404_20555 IPR023232 Glycoside hydrolase, family 2, active site H5404_20555 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase H5404_20555 IPR006103 Glycoside hydrolase family 2, catalytic domain H5404_20555 IPR023230 Glycoside hydrolase, family 2, conserved site H5404_20555 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich H5404_20555 IPR006104 Glycosyl hydrolases family 2, sugar binding domain H5404_20555 IPR013783 Immunoglobulin-like fold H5404_20560 IPR004375 YhcH/YjgK/YiaL family H5404_20560 IPR037012 YhcH/YjgK/YiaL superfamily H5404_20565 IPR002293 Amino acid/polyamine transporter I H5404_20570 IPR036390 Winged helix DNA-binding domain superfamily H5404_20570 IPR005119 LysR, substrate-binding H5404_20570 IPR000847 Transcription regulator HTH, LysR H5404_20570 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_20600 IPR001482 Type II/IV secretion system protein H5404_20600 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_20600 IPR022399 Helicase/secretion neighbourhood ATPase H5404_20630 IPR007055 BON domain H5404_20630 IPR014004 Transport-associated and nodulation domain, bacteria H5404_20630 IPR004846 Type II/III secretion system H5404_20630 IPR001775 GspD/PilQ family H5404_20630 IPR032789 Pilus formation protein, N-terminal H5404_20655 IPR035451 Ada-like domain superfamily H5404_20655 IPR016220 Methylphosphotriester-DNA alkyltransferase, AdaA H5404_20655 IPR018062 HTH domain AraC-type, conserved site H5404_20655 IPR018060 DNA binding HTH domain, AraC-type H5404_20655 IPR009057 Homeobox-like domain superfamily H5404_20655 IPR004026 Ada DNA repair, metal-binding H5404_20660 IPR020845 AMP-binding, conserved site H5404_20660 IPR000873 AMP-dependent synthetase/ligase H5404_20660 IPR042099 AMP-dependent synthetase-like superfamily H5404_20670 IPR005119 LysR, substrate-binding H5404_20670 IPR036390 Winged helix DNA-binding domain superfamily H5404_20670 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_20670 IPR000847 Transcription regulator HTH, LysR H5404_20675 IPR041095 Elongation Factor G, domain II H5404_20675 IPR009022 Elongation factor G, domain III H5404_20675 IPR035647 EF-G domain III/V-like H5404_20675 IPR009000 Translation protein, beta-barrel domain superfamily H5404_20675 IPR035649 EFG, domain V H5404_20675 IPR000640 Elongation factor EFG, domain V-like H5404_20675 IPR004161 Translation elongation factor EFTu-like, domain 2 H5404_20675 IPR031157 Tr-type G domain, conserved site H5404_20675 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_20675 IPR020568 Ribosomal protein S5 domain 2-type fold H5404_20675 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup H5404_20675 IPR005225 Small GTP-binding protein domain H5404_20675 IPR000795 Transcription factor, GTP-binding domain H5404_20675 IPR004540 Translation elongation factor EFG/EF2 H5404_20675 IPR005517 Translation elongation factor EFG/EF2, domain IV H5404_20680 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain H5404_20680 IPR003593 AAA+ ATPase domain H5404_20680 IPR004504 DNA repair protein RadA H5404_20680 IPR041166 LapB, rubredoxin metal binding domain H5404_20680 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup H5404_20680 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_20680 IPR020568 Ribosomal protein S5 domain 2-type fold H5404_20690 IPR023214 HAD superfamily H5404_20690 IPR041449 Phosphoserine phosphatase, N-terminal H5404_20690 IPR036412 HAD-like superfamily H5404_20690 IPR023190 Phosphoserine phosphatase, domain 2 H5404_20700 IPR035994 Nucleoside phosphorylase superfamily H5404_20700 IPR004402 Purine nucleoside phosphorylase DeoD-type H5404_20700 IPR018016 Nucleoside phosphorylase, conserved site H5404_20700 IPR000845 Nucleoside phosphorylase domain H5404_20705 IPR024052 Phosphopentomutase DeoB cap domain superfamily H5404_20705 IPR017850 Alkaline-phosphatase-like, core domain superfamily H5404_20705 IPR006124 Metalloenzyme H5404_20705 IPR010045 Phosphopentomutase H5404_20710 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily H5404_20710 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily H5404_20710 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily H5404_20710 IPR013465 Thymidine phosphorylase H5404_20710 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal H5404_20710 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic H5404_20710 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site H5404_20710 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase H5404_20710 IPR017459 Glycosyl transferase family 3, N-terminal domain H5404_20710 IPR000312 Glycosyl transferase, family 3 H5404_20715 IPR011343 Deoxyribose-phosphate aldolase H5404_20715 IPR002915 DeoC/FbaB/ lacD aldolase H5404_20715 IPR013785 Aldolase-type TIM barrel H5404_20715 IPR023649 Deoxyribose-phosphate aldolase type II H5404_20720 IPR002668 Concentrative nucleoside transporter N-terminal domain H5404_20720 IPR011657 Concentrative nucleoside transporter C-terminal domain H5404_20720 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain H5404_20720 IPR008276 Concentrative nucleoside transporter H5404_20720 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial H5404_20725 IPR001130 TatD family H5404_20725 IPR032466 Metal-dependent hydrolase H5404_20725 IPR018228 Deoxyribonuclease, TatD-related, conserved site H5404_20735 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily H5404_20735 IPR032090 Peptide chain release factor 3, C-terminal H5404_20735 IPR041732 Peptide chain release factor 3, GTP-binding domain H5404_20735 IPR004548 Peptide chain release factor 3 H5404_20735 IPR035647 EF-G domain III/V-like H5404_20735 IPR004161 Translation elongation factor EFTu-like, domain 2 H5404_20735 IPR031157 Tr-type G domain, conserved site H5404_20735 IPR000795 Transcription factor, GTP-binding domain H5404_20735 IPR009000 Translation protein, beta-barrel domain superfamily H5404_20735 IPR005225 Small GTP-binding protein domain H5404_20735 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_20755 IPR000182 GNAT domain H5404_20755 IPR016181 Acyl-CoA N-acyltransferase H5404_20760 IPR036527 SCP2 sterol-binding domain superfamily H5404_20760 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT H5404_20760 IPR039543 Lipid-binding protein POX18/YhbT/NSL-TP1 H5404_20760 IPR003033 SCP2 sterol-binding domain H5404_20765 IPR005330 MHYT domain H5404_20765 IPR000160 GGDEF domain H5404_20765 IPR035919 EAL domain superfamily H5404_20765 IPR001633 EAL domain H5404_20765 IPR029787 Nucleotide cyclase H5404_20770 IPR001539 Peptidase U32 H5404_20770 IPR036206 Thiamin phosphate synthase superfamily H5404_20775 IPR001539 Peptidase U32 H5404_20780 IPR002528 Multi antimicrobial extrusion protein H5404_20790 IPR013105 Tetratricopeptide repeat 2 H5404_20790 IPR011990 Tetratricopeptide-like helical domain superfamily H5404_20790 IPR013026 Tetratricopeptide repeat-containing domain H5404_20790 IPR019734 Tetratricopeptide repeat H5404_20790 IPR023605 Lipoprotein NlpI H5404_20795 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain H5404_20795 IPR020568 Ribosomal protein S5 domain 2-type fold H5404_20795 IPR015847 Exoribonuclease, phosphorolytic domain 2 H5404_20795 IPR027408 PNPase/RNase PH domain superfamily H5404_20795 IPR012162 Polyribonucleotide nucleotidyltransferase H5404_20795 IPR012340 Nucleic acid-binding, OB-fold H5404_20795 IPR004087 K Homology domain H5404_20795 IPR004088 K Homology domain, type 1 H5404_20795 IPR036612 K Homology domain, type 1 superfamily H5404_20795 IPR001247 Exoribonuclease, phosphorolytic domain 1 H5404_20795 IPR022967 RNA-binding domain, S1 H5404_20795 IPR003029 S1 domain H5404_20795 IPR036345 Exoribonuclease, PH domain 2 superfamily H5404_20800 IPR000589 Ribosomal protein S15 H5404_20800 IPR005290 Ribosomal protein S15, bacterial-type H5404_20800 IPR009068 S15/NS1, RNA-binding H5404_20805 IPR015947 PUA-like superfamily H5404_20805 IPR036974 PUA domain superfamily H5404_20805 IPR020103 Pseudouridine synthase, catalytic domain superfamily H5404_20805 IPR014780 tRNA pseudouridine synthase II, TruB H5404_20805 IPR002501 Pseudouridine synthase II, N-terminal H5404_20805 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal H5404_20805 IPR032819 tRNA pseudouridylate synthase B, C-terminal H5404_20810 IPR023799 Ribosome-binding factor A domain superfamily H5404_20810 IPR020053 Ribosome-binding factor A, conserved site H5404_20810 IPR015946 K homology domain-like, alpha/beta H5404_20810 IPR000238 Ribosome-binding factor A H5404_20815 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_20815 IPR000795 Transcription factor, GTP-binding domain H5404_20815 IPR013575 Initiation factor 2 associated domain, bacterial H5404_20815 IPR009061 Putative DNA-binding domain superfamily H5404_20815 IPR000178 Translation initiation factor aIF-2, bacterial-like H5404_20815 IPR015760 Translation initiation factor IF- 2 H5404_20815 IPR005225 Small GTP-binding protein domain H5404_20815 IPR006847 Translation initiation factor IF-2, N-terminal H5404_20815 IPR036925 Translation initiation factor IF-2, domain 3 superfamily H5404_20815 IPR009000 Translation protein, beta-barrel domain superfamily H5404_20815 IPR023115 Translation initiation factor IF- 2, domain 3 H5404_20820 IPR030842 Transcription termination/antitermination protein NusA, bacterial H5404_20820 IPR003029 S1 domain H5404_20820 IPR013735 Transcription factor NusA, N-terminal H5404_20820 IPR010214 Transcription termination factor NusA, C-terminal duplication H5404_20820 IPR015946 K homology domain-like, alpha/beta H5404_20820 IPR025249 KH domain, NusA-like H5404_20820 IPR036555 NusA, N-terminal domain superfamily H5404_20820 IPR009019 K homology domain superfamily, prokaryotic type H5404_20820 IPR012340 Nucleic acid-binding, OB-fold H5404_20820 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical H5404_20820 IPR010213 Transcription termination factor NusA H5404_20820 IPR022967 RNA-binding domain, S1 H5404_20825 IPR035956 RimP, N-terminal domain superfamily H5404_20825 IPR028989 Ribosome maturation factor RimP, N-terminal H5404_20825 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily H5404_20825 IPR028998 Ribosome maturation factor RimP, C-terminal H5404_20825 IPR003728 Ribosome maturation factor RimP H5404_20840 IPR004692 Preprotein translocase SecG subunit H5404_20845 IPR016066 Alpha-D-phosphohexomutase, conserved site H5404_20845 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I H5404_20845 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily H5404_20845 IPR005843 Alpha-D-phosphohexomutase, C-terminal H5404_20845 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III H5404_20845 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II H5404_20845 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III H5404_20845 IPR005841 Alpha-D-phosphohexomutase superfamily H5404_20845 IPR006352 Phosphoglucosamine mutase, bacterial type H5404_20850 IPR011005 Dihydropteroate synthase-like H5404_20850 IPR006390 Dihydropteroate synthase H5404_20850 IPR000489 Pterin-binding domain H5404_20855 IPR037219 Peptidase M41-like H5404_20855 IPR000642 Peptidase M41 H5404_20855 IPR011546 Peptidase M41, FtsH extracellular H5404_20855 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_20855 IPR003593 AAA+ ATPase domain H5404_20855 IPR041569 AAA ATPase, AAA+ lid domain H5404_20855 IPR005936 Peptidase, FtsH H5404_20855 IPR003959 ATPase, AAA-type, core H5404_20855 IPR003960 ATPase, AAA-type, conserved site H5404_20860 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_20860 IPR002877 Ribosomal RNA methyltransferase FtsJ domain H5404_20860 IPR015507 Ribosomal RNA large subunit methyltransferase E H5404_20865 IPR035920 YhbY-like superfamily H5404_20865 IPR017924 RNA-binding protein YhbY H5404_20865 IPR001890 RNA-binding, CRM domain H5404_20870 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal H5404_20870 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal H5404_20870 IPR028624 Transcription elongation factor GreA/GreB H5404_20870 IPR006359 Transcription elongation factor GreA H5404_20870 IPR018151 Transcription elongation factor, GreA/GreB, conserved site H5404_20870 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily H5404_20870 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily H5404_20870 IPR023459 Transcription elongation factor GreA/GreB family H5404_20875 IPR033900 Porin domain, Gram-negative type H5404_20875 IPR023614 Porin domain superfamily H5404_20880 IPR012338 Beta-lactamase/transpeptidase-like H5404_20880 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C H5404_20890 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 H5404_20890 IPR024088 Tyrosine-tRNA ligase, bacterial-type H5404_20890 IPR002307 Tyrosine-tRNA ligase H5404_20890 IPR036986 RNA-binding S4 domain superfamily H5404_20890 IPR002942 RNA-binding S4 domain H5404_20890 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold H5404_20890 IPR002305 Aminoacyl-tRNA synthetase, class Ic H5404_20890 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site H5404_20895 IPR011055 Duplicated hybrid motif H5404_20895 IPR016047 Peptidase M23 H5404_20895 IPR013731 Opacity-associated protein A, N-terminal H5404_20895 IPR018392 LysM domain H5404_20900 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains H5404_20900 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 H5404_20900 IPR001036 Acriflavin resistance protein H5404_20910 IPR000361 FeS cluster biogenesis H5404_20910 IPR016092 FeS cluster insertion protein H5404_20910 IPR017870 FeS cluster insertion, C-terminal, conserved site H5404_20910 IPR035903 HesB-like domain superfamily H5404_20910 IPR023063 FeS cluster insertion protein ErpA H5404_20915 IPR015421 Pyridoxal phosphate-dependent transferase, major domain H5404_20915 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 H5404_20915 IPR015424 Pyridoxal phosphate-dependent transferase H5404_20915 IPR005814 Aminotransferase class-III H5404_20915 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase H5404_20920 IPR002549 Transmembrane protein TqsA-like H5404_20925 IPR007848 Methyltransferase small domain H5404_20925 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_20925 IPR023543 rRNA small subunit methyltransferase C H5404_20925 IPR013675 Methyltransferase small, N-terminal H5404_20925 IPR002052 DNA methylase, N-6 adenine-specific, conserved site H5404_20930 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain H5404_20930 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily H5404_20930 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain H5404_20930 IPR005467 Histidine kinase domain H5404_20930 IPR036641 HPT domain superfamily H5404_20930 IPR003594 Histidine kinase/HSP90-like ATPase H5404_20930 IPR011006 CheY-like superfamily H5404_20930 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF H5404_20930 IPR001789 Signal transduction response regulator, receiver domain H5404_20930 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_20930 IPR004358 Signal transduction histidine kinase-related protein, C-terminal H5404_20935 IPR039424 Solute-binding protein family 5 H5404_20935 IPR000914 Solute-binding protein family 5 domain H5404_20935 IPR023765 Solute-binding protein family 5, conserved site H5404_20935 IPR030678 Peptide/nickel binding protein, MppA-type H5404_20940 IPR035906 MetI-like superfamily H5404_20940 IPR000515 ABC transporter type 1, transmembrane domain MetI-like H5404_20945 IPR025966 Oligopeptide transport permease C-like, N-terminal domain H5404_20945 IPR000515 ABC transporter type 1, transmembrane domain MetI-like H5404_20945 IPR035906 MetI-like superfamily H5404_20950 IPR003439 ABC transporter-like H5404_20950 IPR017871 ABC transporter, conserved site H5404_20950 IPR003593 AAA+ ATPase domain H5404_20950 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_20950 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal H5404_20955 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal H5404_20955 IPR003593 AAA+ ATPase domain H5404_20955 IPR017871 ABC transporter, conserved site H5404_20955 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_20955 IPR003439 ABC transporter-like H5404_20965 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type H5404_20970 IPR025705 Beta-hexosaminidase H5404_20970 IPR015883 Glycoside hydrolase family 20, catalytic domain H5404_20970 IPR029018 Beta-hexosaminidase-like, domain 2 H5404_20970 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal H5404_20970 IPR017853 Glycoside hydrolase superfamily H5404_20975 IPR037828 N,N'-diacetylchitobiose phosphorylase, N-terminal H5404_20975 IPR009342 Putative carbohydrate binding domain H5404_20975 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily H5404_20975 IPR010383 Glycosyl hydrolase 94 H5404_20975 IPR012341 Six-hairpin glycosidase-like superfamily H5404_20975 IPR008928 Six-hairpin glycosidase superfamily H5404_20975 IPR011013 Galactose mutarotase-like domain superfamily H5404_20975 IPR033432 Glycosyl hydrolase 36, catalytic domain H5404_20980 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily H5404_20980 IPR016066 Alpha-D-phosphohexomutase, conserved site H5404_20980 IPR005841 Alpha-D-phosphohexomutase superfamily H5404_20980 IPR006352 Phosphoglucosamine mutase, bacterial type H5404_20980 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III H5404_20980 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II H5404_20980 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III H5404_20980 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I H5404_20980 IPR005843 Alpha-D-phosphohexomutase, C-terminal H5404_20985 IPR003439 ABC transporter-like H5404_20985 IPR003593 AAA+ ATPase domain H5404_20985 IPR013611 Transport-associated OB, type 2 H5404_20985 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_20985 IPR008995 Molybdate/tungstate binding, C-terminal H5404_20985 IPR017871 ABC transporter, conserved site H5404_20985 IPR015853 ABC transporter, ferric cation import, FbpC H5404_20995 IPR026045 Ferric binding protein H5404_20995 IPR006059 Bacterial extracellular solute-binding protein H5404_21000 IPR024041 Ammonium transporter AmtB-like domain H5404_21000 IPR018047 Ammonium transporter, conserved site H5404_21000 IPR001905 Ammonium transporter H5404_21000 IPR029020 Ammonium/urea transporter H5404_21005 IPR017918 Nitrogen regulatory protein PII, conserved site H5404_21005 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal H5404_21005 IPR011322 Nitrogen regulatory PII-like, alpha/beta H5404_21005 IPR002187 Nitrogen regulatory protein PII H5404_21005 IPR002332 Nitrogen regulatory protein P-II, urydylation site H5404_21010 IPR008249 Uncharacterised protein family UPF0231 H5404_21015 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain H5404_21015 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel H5404_21015 IPR015932 Aconitase, domain 2 H5404_21015 IPR018136 Aconitase family, 4Fe-4S cluster binding site H5404_21015 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 H5404_21015 IPR036008 Aconitase, iron-sulfur domain H5404_21015 IPR015933 Aconitase B, HEAT-like domain H5404_21015 IPR036288 Aconitase B, HEAT-like domain superfamily H5404_21015 IPR015929 Aconitase B, swivel H5404_21015 IPR004406 Aconitase B H5404_21020 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase H5404_21020 IPR002641 Patatin-like phospholipase domain H5404_21020 IPR001423 Lysophospholipase patatin, conserved site H5404_21025 IPR023346 Lysozyme-like domain superfamily H5404_21025 IPR028166 Bifunctional transglycosylase second domain H5404_21025 IPR012338 Beta-lactamase/transpeptidase-like H5404_21025 IPR001460 Penicillin-binding protein, transpeptidase H5404_21025 IPR011813 Penicillin-binding protein 1B H5404_21025 IPR036950 Penicillin binding protein transglycosylase domain H5404_21025 IPR001264 Glycosyl transferase, family 51 H5404_21030 IPR011545 DEAD/DEAH box helicase domain H5404_21030 IPR007502 Helicase-associated domain H5404_21030 IPR001650 Helicase, C-terminal H5404_21030 IPR014001 Helicase superfamily 1/2, ATP-binding domain H5404_21030 IPR010225 ATP-dependent helicase HrpB H5404_21030 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_21030 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal H5404_21035 IPR041465 SfsA, N-terminal OB domain H5404_21035 IPR005224 Sugar fermentation stimulation protein H5404_21035 IPR040452 Sugar fermentation stimulation protein, C-terminal H5404_21040 IPR020458 Zinc finger, DksA/TraR C4-type conserved site H5404_21040 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria H5404_21040 IPR037187 DksA, N-terminal domain superfamily H5404_21040 IPR000962 Zinc finger, DksA/TraR C4-type H5404_21040 IPR012784 RNA polymerase-binding transcription factor DksA H5404_21045 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold H5404_21045 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain H5404_21045 IPR000924 Glutamyl/glutaminyl-tRNA synthetase H5404_21045 IPR022380 Glutamyl-Q tRNA(Asp) synthetase H5404_21050 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain H5404_21050 IPR002646 Poly A polymerase, head domain H5404_21050 IPR010206 Poly(A) polymerase I H5404_21050 IPR025866 Polymerase A arginine-rich C-terminal domain H5404_21055 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily H5404_21055 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK H5404_21060 IPR003700 Ketopantoate hydroxymethyltransferase H5404_21060 IPR040442 Pyruvate kinase-like domain superfamily H5404_21060 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily H5404_21065 IPR004821 Cytidyltransferase-like domain H5404_21065 IPR003721 Pantoate-beta-alanine ligase H5404_21065 IPR042176 Pantoate-beta-alanine ligase, C-terminal domain H5404_21065 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold H5404_21070 IPR004960 Bacterial lipid A biosynthesis acyltransferase H5404_21070 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase H5404_21075 IPR000412 ABC-2 transporter H5404_21075 IPR013525 ABC-2 type transporter H5404_21080 IPR003593 AAA+ ATPase domain H5404_21080 IPR003439 ABC transporter-like H5404_21080 IPR017871 ABC transporter, conserved site H5404_21080 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_21085 IPR001902 SLC26A/SulP transporter H5404_21085 IPR011547 SLC26A/SulP transporter domain H5404_21085 IPR036513 STAS domain superfamily H5404_21085 IPR002645 STAS domain H5404_21090 IPR001765 Carbonic anhydrase H5404_21090 IPR036874 Carbonic anhydrase superfamily H5404_21090 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site H5404_21095 IPR005904 Hypoxanthine phosphoribosyl transferase H5404_21095 IPR029057 Phosphoribosyltransferase-like H5404_21095 IPR000836 Phosphoribosyltransferase domain H5404_21100 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily H5404_21100 IPR001647 DNA-binding HTH domain, TetR-type H5404_21100 IPR009057 Homeobox-like domain superfamily H5404_21105 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site H5404_21105 IPR036188 FAD/NAD(P)-binding domain superfamily H5404_21105 IPR023753 FAD/NAD(P)-binding domain H5404_21105 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily H5404_21105 IPR006258 Dihydrolipoamide dehydrogenase H5404_21105 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I H5404_21105 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H5404_21110 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily H5404_21110 IPR036625 E3-binding domain superfamily H5404_21110 IPR004167 Peripheral subunit-binding domain H5404_21110 IPR011053 Single hybrid motif H5404_21110 IPR000089 Biotin/lipoyl attachment H5404_21110 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex H5404_21110 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain H5404_21110 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site H5404_21115 IPR004660 Pyruvate dehydrogenase E1 component H5404_21115 IPR035807 Pyruvate dehydrogenase E1 component, N-terminal H5404_21115 IPR041621 Pyruvate dehydrogenase E1 component, middle domain H5404_21115 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II H5404_21115 IPR005474 Transketolase, N-terminal H5404_21115 IPR029061 Thiamin diphosphate-binding fold H5404_21120 IPR036390 Winged helix DNA-binding domain superfamily H5404_21120 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_21120 IPR011711 GntR, C-terminal H5404_21120 IPR008920 Transcription regulator FadR/GntR, C-terminal H5404_21120 IPR000524 Transcription regulator HTH, GntR H5404_21125 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily H5404_21125 IPR002502 N-acetylmuramoyl-L-alanine amidase domain H5404_21130 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD H5404_21130 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal H5404_21130 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily H5404_21130 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal H5404_21130 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal H5404_21130 IPR004393 Nicotinate-nucleotide pyrophosphorylase H5404_21130 IPR013785 Aldolase-type TIM barrel H5404_21140 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_21140 IPR042181 Type II secretion system, protein E, N-terminal H5404_21140 IPR007831 General secretory system II, protein E, N-terminal H5404_21140 IPR037257 General secretory system II, protein E, N-terminal superfamily H5404_21140 IPR001482 Type II/IV secretion system protein H5404_21140 IPR013374 ATPase, type IV, pilus assembly, PilB H5404_21145 IPR003004 GspF/PilC family H5404_21145 IPR001992 Type II secretion system conserved site H5404_21145 IPR042094 Type II secretion system F domain superfamily H5404_21145 IPR018076 Type II secretion system F domain H5404_21150 IPR014032 Peptidase A24A, prepilin type IV, bacterial H5404_21150 IPR000045 Prepilin type IV endopeptidase, peptidase domain H5404_21150 IPR010627 Peptidase A24A, N-terminal H5404_21155 IPR001977 Dephospho-CoA kinase H5404_21155 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_21160 IPR036268 ZapD domain superfamily H5404_21160 IPR009777 Cell division protein ZapD H5404_21160 IPR027462 Z ring-associated protein D, C-terminal H5404_21165 IPR005584 DNA gyrase inhibitor YacG H5404_21165 IPR013088 Zinc finger, NHR/GATA-type H5404_21170 IPR038657 Ribosomal protein L19 superfamily H5404_21170 IPR001857 Ribosomal protein L19 H5404_21170 IPR018257 Ribosomal protein L19, conserved site H5404_21170 IPR008991 Translation protein SH3-like domain superfamily H5404_21175 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain H5404_21175 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria H5404_21175 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal H5404_21175 IPR029028 Alpha/beta knot methyltransferases H5404_21175 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal H5404_21180 IPR009000 Translation protein, beta-barrel domain superfamily H5404_21180 IPR011961 16S rRNA processing protein RimM H5404_21180 IPR036976 RimM, N-terminal domain superfamily H5404_21180 IPR027275 PRC-barrel domain H5404_21180 IPR011033 PRC-barrel-like superfamily H5404_21180 IPR002676 RimM, N-terminal H5404_21185 IPR000307 Ribosomal protein S16 H5404_21185 IPR020592 Ribosomal protein S16, conserved site H5404_21185 IPR023803 Ribosomal protein S16 domain superfamily H5404_21190 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily H5404_21190 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain H5404_21190 IPR022941 Signal recognition particle, SRP54 subunit H5404_21190 IPR004780 Signal recognition particle protein H5404_21190 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily H5404_21190 IPR013822 Signal recognition particle SRP54, helical bundle H5404_21190 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_21190 IPR003593 AAA+ ATPase domain H5404_21190 IPR004125 Signal recognition particle, SRP54 subunit, M-domain H5404_21195 IPR002541 Cytochrome c assembly protein H5404_21200 IPR000644 CBS domain H5404_21200 IPR002550 CNNM, transmembrane domain H5404_21200 IPR036318 FAD-binding, type PCMH-like superfamily H5404_21200 IPR016169 FAD-binding, type PCMH, subdomain 2 H5404_21200 IPR005170 Transporter-associated domain H5404_21205 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily H5404_21205 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like H5404_21205 IPR003815 S-ribosylhomocysteinase (LuxS) H5404_21215 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain H5404_21215 IPR007370 Glutamate--cysteine ligase H5404_21215 IPR006334 Glutamate--cysteine ligase, monofunctional H5404_21220 IPR011765 Peptidase M16, N-terminal H5404_21220 IPR001431 Peptidase M16, zinc-binding site H5404_21220 IPR007863 Peptidase M16, C-terminal H5404_21220 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like H5404_21225 IPR032816 SNARE associated Golgi protein H5404_21230 IPR013154 Alcohol dehydrogenase, N-terminal H5404_21230 IPR020843 Polyketide synthase, enoylreductase domain H5404_21230 IPR036291 NAD(P)-binding domain superfamily H5404_21230 IPR011032 GroES-like superfamily H5404_21230 IPR013149 Alcohol dehydrogenase, C-terminal H5404_21230 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site H5404_21235 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit H5404_21240 IPR000891 Pyruvate carboxyltransferase H5404_21240 IPR011053 Single hybrid motif H5404_21240 IPR001882 Biotin-binding site H5404_21240 IPR003379 Carboxylase, conserved domain H5404_21240 IPR000089 Biotin/lipoyl attachment H5404_21240 IPR005776 Oxaloacetate decarboxylase, alpha subunit H5404_21240 IPR013785 Aldolase-type TIM barrel H5404_21245 IPR005899 Sodium ion-translocating decarboxylase H5404_21245 IPR023424 Oxaloacetate decarboxylase gamma chain, probable H5404_21300 IPR036107 Carbon storage regulator superfamily H5404_21300 IPR003751 Translational regulator CsrA H5404_21305 IPR036393 Acetylglutamate kinase-like superfamily H5404_21305 IPR041740 Aspartokinase catalytic domain H5404_21305 IPR001048 Aspartate/glutamate/uridylate kinase H5404_21305 IPR005260 Aspartate kinase, monofunctional class H5404_21305 IPR001341 Aspartate kinase H5404_21305 IPR018042 Aspartate kinase, conserved site H5404_21305 IPR002912 ACT domain H5404_21305 IPR027795 CASTOR, ACT domain H5404_21310 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal H5404_21310 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily H5404_21310 IPR012947 Threonyl/alanyl tRNA synthetase, SAD H5404_21310 IPR009000 Translation protein, beta-barrel domain superfamily H5404_21310 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily H5404_21310 IPR003156 DHHA1 domain H5404_21310 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria H5404_21310 IPR018165 Alanyl-tRNA synthetase, class IIc, core domain H5404_21310 IPR002318 Alanine-tRNA ligase, class IIc H5404_21315 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_21315 IPR003783 Regulatory protein RecX H5404_21320 IPR020584 DNA recombination/repair protein RecA, conserved site H5404_21320 IPR003593 AAA+ ATPase domain H5404_21320 IPR013765 DNA recombination and repair protein RecA H5404_21320 IPR020587 DNA recombination and repair protein RecA, monomer-monomer interface H5404_21320 IPR023400 DNA recombination and repair protein RecA, C-terminal H5404_21320 IPR020588 DNA recombination and repair protein RecA-like, ATP-binding domain H5404_21320 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_21325 IPR008136 CinA, C-terminal H5404_21325 IPR036653 CinA-like, C-terminal H5404_21330 IPR036187 DNA mismatch repair protein MutS, core domain superfamily H5404_21330 IPR007860 DNA mismatch repair protein MutS, connector domain H5404_21330 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_21330 IPR016151 DNA mismatch repair protein MutS, N-terminal H5404_21330 IPR007696 DNA mismatch repair protein MutS, core H5404_21330 IPR007861 DNA mismatch repair protein MutS, clamp H5404_21330 IPR000432 DNA mismatch repair protein MutS, C-terminal H5404_21330 IPR017261 DNA mismatch repair protein MutS/MSH H5404_21330 IPR036678 MutS, connector domain superfamily H5404_21330 IPR007695 DNA mismatch repair protein MutS-like, N-terminal H5404_21330 IPR005748 DNA mismatch repair protein MutS H5404_21335 IPR014284 RNA polymerase sigma-70 like domain H5404_21335 IPR000943 RNA polymerase sigma-70 H5404_21335 IPR009042 RNA polymerase sigma-70 region 1.2 H5404_21335 IPR007627 RNA polymerase sigma-70 region 2 H5404_21335 IPR007624 RNA polymerase sigma-70 region 3 H5404_21335 IPR007630 RNA polymerase sigma-70 region 4 H5404_21335 IPR013325 RNA polymerase sigma factor, region 2 H5404_21335 IPR013324 RNA polymerase sigma factor, region 3/4-like H5404_21335 IPR012761 RNA polymerase sigma factor RpoS H5404_21335 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_21340 IPR018392 LysM domain H5404_21340 IPR036779 LysM domain superfamily H5404_21340 IPR016047 Peptidase M23 H5404_21340 IPR011055 Duplicated hybrid motif H5404_21345 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_21345 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase H5404_21350 IPR036523 SurE-like phosphatase/nucleotidase superfamily H5404_21350 IPR002828 Survival protein SurE-like phosphatase/nucleotidase H5404_21350 IPR030048 Survival protein SurE H5404_21355 IPR020103 Pseudouridine synthase, catalytic domain superfamily H5404_21355 IPR011760 Pseudouridine synthase, TruD, insertion domain H5404_21355 IPR020119 Pseudouridine synthase TruD, conserved site H5404_21355 IPR001656 Pseudouridine synthase, TruD H5404_21355 IPR042214 Pseudouridine synthase, TruD, catalytic domain H5404_21360 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily H5404_21360 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site H5404_21360 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase H5404_21365 IPR029044 Nucleotide-diphospho-sugar transferases H5404_21365 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site H5404_21365 IPR034683 Cytidylyltransferase IspD/TarI H5404_21365 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase H5404_21370 IPR023081 Cell division protein FtsB H5404_21370 IPR007060 Septum formation initiator FtsL/DivIC H5404_21375 IPR036849 Enolase-like, C-terminal domain superfamily H5404_21375 IPR029017 Enolase-like, N-terminal H5404_21375 IPR020810 Enolase, C-terminal TIM barrel domain H5404_21375 IPR020809 Enolase, conserved site H5404_21375 IPR020811 Enolase, N-terminal H5404_21375 IPR000941 Enolase H5404_21380 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_21380 IPR033828 CTP synthase GATase domain H5404_21380 IPR017456 CTP synthase, N-terminal H5404_21380 IPR017926 Glutamine amidotransferase H5404_21380 IPR004468 CTP synthase H5404_21380 IPR029062 Class I glutamine amidotransferase-like H5404_21385 IPR011551 NTP pyrophosphohydrolase MazG H5404_21385 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core H5404_21390 IPR003607 HD/PDEase domain H5404_21390 IPR012676 TGS-like H5404_21390 IPR004095 TGS H5404_21390 IPR033655 RelA, TGS domain H5404_21390 IPR004811 RelA/SpoT family H5404_21390 IPR012675 Beta-grasp domain superfamily H5404_21390 IPR002912 ACT domain H5404_21390 IPR007685 RelA/SpoT H5404_21395 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD H5404_21395 IPR030390 RNA methyltransferase TrmA, active site H5404_21395 IPR030391 RNA methyltransferase TrmA, conserved site H5404_21395 IPR012340 Nucleic acid-binding, OB-fold H5404_21395 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_21395 IPR002792 TRAM domain H5404_21395 IPR010280 (Uracil-5)-methyltransferase family H5404_21400 IPR001789 Signal transduction response regulator, receiver domain H5404_21400 IPR003660 HAMP domain H5404_21400 IPR003594 Histidine kinase/HSP90-like ATPase H5404_21400 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_21400 IPR005467 Histidine kinase domain H5404_21400 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain H5404_21400 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily H5404_21400 IPR019247 Histidine kinase BarA, N-terminal H5404_21400 IPR036641 HPT domain superfamily H5404_21400 IPR004358 Signal transduction histidine kinase-related protein, C-terminal H5404_21400 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain H5404_21400 IPR011006 CheY-like superfamily H5404_21405 IPR037143 4'-phosphopantetheinyl transferase domain superfamily H5404_21405 IPR004568 Phosphopantetheine-protein transferase domain H5404_21405 IPR002582 Holo-[acyl carrier protein] synthase H5404_21405 IPR008278 4'-phosphopantetheinyl transferase domain H5404_21410 IPR013785 Aldolase-type TIM barrel H5404_21410 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ H5404_21410 IPR036130 Pyridoxine 5'-phosphate synthase H5404_21415 IPR022572 DNA replication/recombination mediator RecO, N-terminal H5404_21415 IPR003717 Recombination protein O, RecO H5404_21415 IPR037278 ARFGAP/RecO-like zinc finger H5404_21415 IPR012340 Nucleic acid-binding, OB-fold H5404_21420 IPR005225 Small GTP-binding protein domain H5404_21420 IPR030388 Era-type guanine nucleotide-binding (G) domain H5404_21420 IPR006073 GTP binding domain H5404_21420 IPR015946 K homology domain-like, alpha/beta H5404_21420 IPR004044 K Homology domain, type 2 H5404_21420 IPR009019 K homology domain superfamily, prokaryotic type H5404_21420 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_21420 IPR005662 GTP-binding protein Era H5404_21425 IPR000999 Ribonuclease III domain H5404_21425 IPR036389 Ribonuclease III, endonuclease domain superfamily H5404_21425 IPR014720 Double-stranded RNA-binding domain H5404_21425 IPR011907 Ribonuclease III H5404_21430 IPR000223 Peptidase S26A, signal peptidase I H5404_21430 IPR036286 LexA/Signal peptidase-like superfamily H5404_21430 IPR019756 Peptidase S26A, signal peptidase I, serine active site H5404_21430 IPR019758 Peptidase S26A, signal peptidase I, conserved site H5404_21430 IPR019757 Peptidase S26A, signal peptidase I, lysine active site H5404_21430 IPR019533 Peptidase S26 H5404_21435 IPR035647 EF-G domain III/V-like H5404_21435 IPR000640 Elongation factor EFG, domain V-like H5404_21435 IPR004161 Translation elongation factor EFTu-like, domain 2 H5404_21435 IPR031157 Tr-type G domain, conserved site H5404_21435 IPR038363 LepA, C-terminal domain superfamily H5404_21435 IPR000795 Transcription factor, GTP-binding domain H5404_21435 IPR006297 Elongation factor 4 H5404_21435 IPR009000 Translation protein, beta-barrel domain superfamily H5404_21435 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_21435 IPR005225 Small GTP-binding protein domain H5404_21435 IPR035654 Elongation factor 4, domain IV H5404_21435 IPR013842 GTP-binding protein LepA, C-terminal H5404_21440 IPR026268 Protein RseC H5404_21440 IPR007359 Positive regulator of sigma(E), RseC/MucC H5404_21445 IPR033436 MucB/RseB, C-terminal H5404_21445 IPR038484 MucB/RseB, C-terminal domain superfamily H5404_21445 IPR005588 MucB/RseB H5404_21445 IPR033434 MucB/RseB, N-terminal H5404_21450 IPR026279 Sigma-E factor negative regulatory protein RseA H5404_21450 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily H5404_21450 IPR005573 Anti sigma-E protein RseA, C-terminal H5404_21450 IPR005572 Anti sigma-E protein RseA, N-terminal H5404_21455 IPR013325 RNA polymerase sigma factor, region 2 H5404_21455 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 H5404_21455 IPR039425 RNA polymerase sigma-70 like H5404_21455 IPR014284 RNA polymerase sigma-70 like domain H5404_21455 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_21455 IPR007627 RNA polymerase sigma-70 region 2 H5404_21455 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site H5404_21455 IPR014286 RNA polymerase sigma-70 RpoE type H5404_21455 IPR013324 RNA polymerase sigma factor, region 3/4-like H5404_21460 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain H5404_21460 IPR036188 FAD/NAD(P)-binding domain superfamily H5404_21460 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily H5404_21460 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal H5404_21460 IPR005288 L-aspartate oxidase H5404_21460 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily H5404_21465 IPR005631 Flavinator of succinate dehydrogenase H5404_21465 IPR036714 Flavinator of succinate dehydrogenase superfamily H5404_21470 IPR006222 Aminomethyltransferase, folate-binding domain H5404_21470 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal H5404_21470 IPR023758 tRNA-modifying protein YgfZ H5404_21470 IPR017703 YgfZ/GcvT conserved site H5404_21485 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 H5404_21485 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site H5404_21485 IPR036188 FAD/NAD(P)-binding domain superfamily H5404_21485 IPR002938 FAD-binding domain H5404_21490 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 H5404_21490 IPR036188 FAD/NAD(P)-binding domain superfamily H5404_21490 IPR002938 FAD-binding domain H5404_21490 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase H5404_21490 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site H5404_21495 IPR011978 Uncharacterised protein family UPF0149 H5404_21495 IPR036255 YgfB-like superfamily H5404_21500 IPR036192 Cell division protein ZapA-like superfamily H5404_21500 IPR007838 Cell division protein ZapA-like H5404_21500 IPR023771 Cell division protein ZapA, eubacteria H5404_21510 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily H5404_21510 IPR037171 NagB/RpiA transferase-like H5404_21510 IPR002698 5-formyltetrahydrofolate cyclo-ligase H5404_21515 IPR037171 NagB/RpiA transferase-like H5404_21515 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup H5404_21515 IPR004788 Ribose 5-phosphate isomerase, type A H5404_21520 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 H5404_21520 IPR036291 NAD(P)-binding domain superfamily H5404_21520 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain H5404_21520 IPR002912 ACT domain H5404_21520 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H5404_21520 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site H5404_21525 IPR007497 Protein of unknown function DUF541 H5404_21530 IPR005119 LysR, substrate-binding H5404_21530 IPR017685 HTH-type transcriptional regulator ArgP H5404_21530 IPR036390 Winged helix DNA-binding domain superfamily H5404_21530 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria H5404_21530 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_21530 IPR000847 Transcription regulator HTH, LysR H5404_21535 IPR004777 L-lysine exporter/arginine exporter H5404_21535 IPR023445 Arginine exporter protein ArgO, enterobacteria H5404_21535 IPR001123 Amino acid exporter protein, LeuE-type H5404_21540 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain H5404_21540 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily H5404_21545 IPR008910 Conserved TM helix H5404_21545 IPR006685 Mechanosensitive ion channel MscS H5404_21545 IPR010920 LSM domain superfamily H5404_21545 IPR011066 Mechanosensitive ion channel MscS, C-terminal H5404_21545 IPR006686 Mechanosensitive ion channel MscS, conserved site H5404_21545 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 H5404_21545 IPR023408 Mechanosensitive ion channel MscS domain superfamily H5404_21550 IPR013785 Aldolase-type TIM barrel H5404_21550 IPR000771 Fructose-bisphosphate aldolase, class-II H5404_21550 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype H5404_21555 IPR001576 Phosphoglycerate kinase H5404_21555 IPR015911 Phosphoglycerate kinase, conserved site H5404_21555 IPR015824 Phosphoglycerate kinase, N-terminal H5404_21555 IPR036043 Phosphoglycerate kinase superfamily H5404_21560 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain H5404_21560 IPR006422 D-erythrose-4-phosphate dehydrogenase H5404_21560 IPR036291 NAD(P)-binding domain superfamily H5404_21560 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain H5404_21560 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family H5404_21565 IPR039426 Vitamin B12 transporter BtuB-like H5404_21565 IPR012910 TonB-dependent receptor, plug domain H5404_21565 IPR010916 TonB box, conserved site H5404_21565 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily H5404_21565 IPR010917 TonB-dependent receptor, conserved site H5404_21565 IPR037066 TonB-dependent receptor, plug domain superfamily H5404_21565 IPR000531 TonB-dependent receptor-like, beta-barrel H5404_21570 IPR005119 LysR, substrate-binding H5404_21570 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_21570 IPR036390 Winged helix DNA-binding domain superfamily H5404_21570 IPR000847 Transcription regulator HTH, LysR H5404_21575 IPR029061 Thiamin diphosphate-binding fold H5404_21575 IPR005474 Transketolase, N-terminal H5404_21575 IPR033247 Transketolase family H5404_21575 IPR020826 Transketolase binding site H5404_21575 IPR005475 Transketolase-like, pyrimidine-binding domain H5404_21575 IPR005478 Transketolase, bacterial-like H5404_21575 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II H5404_21575 IPR033248 Transketolase, C-terminal domain H5404_21580 IPR022629 S-adenosylmethionine synthetase, central domain H5404_21580 IPR022628 S-adenosylmethionine synthetase, N-terminal H5404_21580 IPR002133 S-adenosylmethionine synthetase H5404_21580 IPR022636 S-adenosylmethionine synthetase superfamily H5404_21580 IPR022630 S-adenosylmethionine synthetase, C-terminal H5404_21580 IPR022631 S-adenosylmethionine synthetase, conserved site H5404_21590 IPR023483 Uncharacterised protein family SprT H5404_21590 IPR035240 SprT-like, zinc ribbon domain H5404_21590 IPR006640 SprT-like H5404_21595 IPR007346 Endonuclease I H5404_21600 IPR029028 Alpha/beta knot methyltransferases H5404_21600 IPR015947 PUA-like superfamily H5404_21600 IPR006700 Ribosomal RNA small subunit methyltransferase E H5404_21600 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal H5404_21605 IPR006284 Glutathione synthetase, prokaryotic H5404_21605 IPR004218 Prokaryotic glutathione synthetase, ATP-binding H5404_21605 IPR004215 Prokaryotic glutathione synthetase, N-terminal H5404_21605 IPR013815 ATP-grasp fold, subdomain 1 H5404_21605 IPR011761 ATP-grasp fold H5404_21605 IPR016185 Pre-ATP-grasp domain superfamily H5404_21610 IPR003774 Protein of unknown function UPF0301 H5404_21615 IPR012337 Ribonuclease H-like superfamily H5404_21615 IPR006641 YqgF/RNase H-like domain H5404_21615 IPR037027 YqgF/RNase H-like domain superfamily H5404_21615 IPR005227 Putative pre-16S rRNA nuclease H5404_21620 IPR001482 Type II/IV secretion system protein H5404_21620 IPR006321 Pilus retraction protein PilT H5404_21620 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_21625 IPR001482 Type II/IV secretion system protein H5404_21625 IPR006321 Pilus retraction protein PilT H5404_21625 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_21625 IPR003593 AAA+ ATPase domain H5404_21630 IPR029066 PLP-binding barrel H5404_21630 IPR001608 Alanine racemase, N-terminal H5404_21630 IPR011078 Pyridoxal phosphate homeostasis protein H5404_21635 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily H5404_21635 IPR036291 NAD(P)-binding domain superfamily H5404_21635 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal H5404_21635 IPR000304 Pyrroline-5-carboxylate reductase H5404_21635 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain H5404_21640 IPR003425 CCB3/YggT H5404_21645 IPR005228 Conserved hypothetical protein CHP00251 H5404_21645 IPR003746 Protein of unknown function DUF167 H5404_21645 IPR036591 YggU-like superfamily H5404_21655 IPR029001 Inosine triphosphate pyrophosphatase-like H5404_21655 IPR002637 Ham1-like protein H5404_21655 IPR020922 dITP/XTP pyrophosphatase H5404_21660 IPR023404 Radical SAM, alpha/beta horseshoe H5404_21660 IPR010723 HemN, C-terminal H5404_21660 IPR004559 Heme chaperone HemW-like H5404_21660 IPR006638 Elp3/MiaB/NifB H5404_21660 IPR007197 Radical SAM H5404_21660 IPR034505 Anaerobic coproporphyrinogen-III oxidase H5404_21665 IPR012338 Beta-lactamase/transpeptidase-like H5404_21665 IPR015868 Glutaminase H5404_21670 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site H5404_21670 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_21670 IPR012327 D12 class N6 adenine-specific DNA methyltransferase H5404_21675 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type H5404_21675 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_21680 IPR000445 Helix-hairpin-helix motif H5404_21680 IPR005760 A/G-specific adenine glycosylase MutY H5404_21680 IPR004036 Endonuclease III-like, conserved site-2 H5404_21680 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif H5404_21680 IPR004035 Endonuclease III, iron-sulphur binding site H5404_21680 IPR011257 DNA glycosylase H5404_21680 IPR015797 NUDIX hydrolase-like domain superfamily H5404_21680 IPR029119 MutY, C-terminal H5404_21680 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal H5404_21680 IPR003265 HhH-GPD domain H5404_21685 IPR007457 Fe(II) trafficking protein YggX H5404_21685 IPR036766 Fe(II) trafficking protein YggX superfamily H5404_21690 IPR008258 Transglycosylase SLT domain 1 H5404_21690 IPR023346 Lysozyme-like domain superfamily H5404_21690 IPR000189 Prokaryotic transglycosylase, active site H5404_21690 IPR024570 Murein transglycosylase-C, N-terminal H5404_21690 IPR023664 Murein transglycosylase-C H5404_21730 IPR003660 HAMP domain H5404_21730 IPR000727 Target SNARE coiled-coil homology domain H5404_21730 IPR033480 Single Cache domain 2 H5404_21730 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain H5404_21730 IPR004090 Chemotaxis methyl-accepting receptor H5404_21760 IPR016162 Aldehyde dehydrogenase, N-terminal H5404_21760 IPR010102 Succinate semialdehyde dehydrogenase H5404_21760 IPR016160 Aldehyde dehydrogenase, cysteine active site H5404_21760 IPR016163 Aldehyde dehydrogenase, C-terminal H5404_21760 IPR029510 Aldehyde dehydrogenase, glutamic acid active site H5404_21760 IPR016161 Aldehyde/histidinol dehydrogenase H5404_21760 IPR015590 Aldehyde dehydrogenase domain H5404_21805 IPR001789 Signal transduction response regulator, receiver domain H5404_21805 IPR003607 HD/PDEase domain H5404_21805 IPR011006 CheY-like superfamily H5404_21805 IPR037522 HD-GYP domain H5404_21810 IPR028082 Periplasmic binding protein-like I H5404_21810 IPR001761 Periplasmic binding protein/LacI sugar binding domain H5404_21810 IPR023588 Transcription regulator HTH, PurR H5404_21810 IPR010982 Lambda repressor-like, DNA-binding domain superfamily H5404_21810 IPR000843 LacI-type HTH domain H5404_21815 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria H5404_21815 IPR006879 Carbohydrate deacetylase YdjC-like H5404_21815 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel H5404_21820 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal H5404_21820 IPR019802 Glycoside hydrolase, family 4, conserved site H5404_21820 IPR036291 NAD(P)-binding domain superfamily H5404_21820 IPR022616 Glycosyl hydrolase, family 4, C-terminal H5404_21820 IPR001088 Glycoside hydrolase, family 4 H5404_21825 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily H5404_21825 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit H5404_21830 IPR004796 Phosphotransferase system, cellobiose-type IIC component H5404_21830 IPR004501 Phosphotransferase system, EIIC component, type 3 H5404_21830 IPR003352 Phosphotransferase system, EIIC H5404_21835 IPR003501 Phosphotransferase system, EIIB component, type 2/3 H5404_21835 IPR013012 Phosphotransferase system, EIIB component, type 3 H5404_21835 IPR036095 PTS system IIB component-like superfamily H5404_21840 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel H5404_21840 IPR002509 NodB homology domain H5404_21840 IPR036573 Carbohydrate-binding module superfamily 5/12 H5404_21840 IPR003610 Carbohydrate-binding module family 5/12 H5404_21850 IPR020904 Short-chain dehydrogenase/reductase, conserved site H5404_21850 IPR036291 NAD(P)-binding domain superfamily H5404_21850 IPR002347 Short-chain dehydrogenase/reductase SDR H5404_21855 IPR018723 Protein of unknown function DUF2254, membrane H5404_21865 IPR030923 LPS export ABC transporter permease LptG H5404_21865 IPR005495 Permease LptG/LptF-related H5404_21870 IPR030922 LPS export ABC transporter permease LptF H5404_21870 IPR005495 Permease LptG/LptF-related H5404_21875 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B H5404_21875 IPR023042 Peptidase M17, leucine aminopeptidase H5404_21875 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal H5404_21875 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal H5404_21880 IPR007459 DNA polymerase III chi subunit, HolC H5404_21880 IPR036768 DNA polymerase III subunit chi superfamily H5404_21885 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm H5404_21885 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily H5404_21885 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm H5404_21885 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold H5404_21885 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding H5404_21885 IPR033705 Valyl tRNA synthetase, anticodon-binding domain H5404_21885 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain H5404_21885 IPR002303 Valine-tRNA ligase H5404_21885 IPR002300 Aminoacyl-tRNA synthetase, class Ia H5404_21885 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site H5404_21885 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding H5404_21895 IPR000182 GNAT domain H5404_21895 IPR016181 Acyl-CoA N-acyltransferase H5404_21905 IPR016716 Regulator of ribonuclease activity B H5404_21905 IPR036701 RraB-like superfamily H5404_21905 IPR009671 Regulator of ribonuclease activity B domain H5404_21910 IPR003876 Arginine deiminase H5404_21915 IPR006130 Aspartate/ornithine carbamoyltransferase H5404_21915 IPR002292 Ornithine/putrescine carbamoyltransferase H5404_21915 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain H5404_21915 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily H5404_21915 IPR024904 Ornithine carbamoyltransferase H5404_21915 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding H5404_21925 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain H5404_21925 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding H5404_21925 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily H5404_21925 IPR006130 Aspartate/ornithine carbamoyltransferase H5404_21925 IPR002082 Aspartate carbamoyltransferase H5404_21930 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily H5404_21930 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal H5404_21930 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal H5404_21930 IPR002801 Aspartate transcarbamylase regulatory subunit H5404_21930 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily H5404_21935 IPR006175 YjgF/YER057c/UK114 family H5404_21935 IPR006056 RidA family H5404_21935 IPR035959 RutC-like superfamily H5404_21935 IPR019897 RidA, conserved site H5404_21940 IPR002123 Phospholipid/glycerol acyltransferase H5404_21940 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase H5404_21945 IPR036968 Enolpyruvate transferase domain superfamily H5404_21945 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase H5404_21945 IPR001986 Enolpyruvate transferase domain H5404_21945 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta H5404_21950 IPR036065 BolA-like superfamily H5404_21950 IPR002634 BolA protein H5404_21960 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC H5404_21960 IPR042245 Tgt2/MlaC superfamily H5404_21965 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD H5404_21965 IPR003399 Mce/MlaD H5404_21970 IPR003453 ABC transport permease subunit MlaE, Proteobacteria H5404_21970 IPR030802 ABC transporter permease MalE H5404_21975 IPR030296 Probable ABC transporter ATP-binding protein MlaF/Mkl H5404_21975 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_21975 IPR003439 ABC transporter-like H5404_21975 IPR003593 AAA+ ATPase domain H5404_21975 IPR017871 ABC transporter, conserved site H5404_21980 IPR004837 Sodium/calcium exchanger membrane region H5404_21980 IPR004481 Sodium/potassium/calcium exchanger H5404_21985 IPR035474 KpsF-like, SIS domain H5404_21985 IPR001347 Sugar isomerase (SIS) H5404_21985 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type H5404_21985 IPR000644 CBS domain H5404_21995 IPR014340 Lipopolysaccharide export system protein LptA H5404_21995 IPR005653 Organic solvent tolerance-like, N-terminal H5404_22000 IPR003439 ABC transporter-like H5404_22000 IPR017871 ABC transporter, conserved site H5404_22000 IPR003593 AAA+ ATPase domain H5404_22000 IPR030921 LPS export ABC transporter, ATP-binding protein LptB H5404_22000 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_22000 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal H5404_22005 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily H5404_22005 IPR007634 RNA polymerase sigma factor 54, DNA-binding H5404_22005 IPR007046 RNA polymerase sigma factor 54, core-binding domain H5404_22005 IPR000394 RNA polymerase sigma factor 54 H5404_22010 IPR003489 Ribosome hibernation promoting factor/RaiA H5404_22010 IPR036567 Ribosome hibernation promotion factor-like H5404_22015 IPR016152 Phosphotransferase/anion transporter H5404_22015 IPR002178 PTS EIIA type-2 domain H5404_22015 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN H5404_22020 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_22020 IPR005337 RapZ-like family H5404_22025 IPR035895 HPr-like superfamily H5404_22025 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site H5404_22025 IPR002114 Phosphotransferase system, HPr serine phosphorylation site H5404_22025 IPR000032 Phosphocarrier protein HPr-like H5404_22030 IPR000644 CBS domain H5404_22030 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily H5404_22030 IPR038076 MgtE, N-terminal domain superfamily H5404_22030 IPR038048 Magnesium transporter MgtE, transmembrane domain H5404_22030 IPR006669 Magnesium transporter MgtE H5404_22030 IPR006667 SLC41 divalent cation transporters, integral membrane domain H5404_22030 IPR006668 Magnesium transporter, MgtE intracellular domain H5404_22035 IPR035068 Metalloprotease TldD/PmbA, N-terminal H5404_22035 IPR036059 Metalloprotease TldD/PmbA superfamily H5404_22035 IPR002510 Metalloprotease TldD/PmbA H5404_22040 IPR023153 PSPTO4464-like domain superfamily H5404_22040 IPR006839 Ribosome-associated, YjgA H5404_22045 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain H5404_22045 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site H5404_22045 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H5404_22045 IPR036291 NAD(P)-binding domain superfamily H5404_22050 IPR006145 Pseudouridine synthase, RsuA/RluA H5404_22050 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site H5404_22050 IPR020103 Pseudouridine synthase, catalytic domain superfamily H5404_22050 IPR006225 Pseudouridine synthase, RluC/RluD H5404_22060 IPR040766 RapA, N-terminal Tudor-like domain 2 H5404_22060 IPR014001 Helicase superfamily 1/2, ATP-binding domain H5404_22060 IPR000330 SNF2-related, N-terminal domain H5404_22060 IPR023949 RNA polymerase-associated protein RapA H5404_22060 IPR040765 RapA, N-terminal Tudor like domain 1 H5404_22060 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_22060 IPR022737 RNA polymerase recycling, bacterial, C-terminal H5404_22060 IPR038718 SNF2-like, N-terminal domain superfamily H5404_22060 IPR001650 Helicase, C-terminal H5404_22065 IPR029060 PIN-like domain superfamily H5404_22065 IPR003714 PhoH-like protein H5404_22065 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_22065 IPR002716 PIN domain H5404_22070 IPR036059 Metalloprotease TldD/PmbA superfamily H5404_22070 IPR002510 Metalloprotease TldD/PmbA H5404_22070 IPR035068 Metalloprotease TldD/PmbA, N-terminal H5404_22070 IPR025502 TldD H5404_22075 IPR003010 Carbon-nitrogen hydrolase H5404_22075 IPR036526 Carbon-nitrogen hydrolase superfamily H5404_22075 IPR001110 Uncharacterised protein family UPF0012, conserved site H5404_22080 IPR025263 Domain of unknown function DUF3971 H5404_22080 IPR011836 Conserved hypothetical protein CHP02099 H5404_22080 IPR032712 AsmA-like, C-terminal H5404_22085 IPR022967 RNA-binding domain, S1 H5404_22085 IPR003029 S1 domain H5404_22085 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G H5404_22085 IPR004659 Ribonuclease E/G H5404_22085 IPR012340 Nucleic acid-binding, OB-fold H5404_22090 IPR003697 Nucleoside triphosphate pyrophosphatase Maf-like protein H5404_22090 IPR029001 Inosine triphosphate pyrophosphatase-like H5404_22095 IPR026034 Cell shape-determining protein MreD, proteobacterial type H5404_22095 IPR007227 Cell shape-determining protein MreD H5404_22100 IPR042177 Cell/Rod shape-determining protein MreC, domain 1 H5404_22100 IPR042175 Cell/Rod shape-determining protein MreC, domain 2 H5404_22100 IPR007221 Rod shape-determining protein MreC H5404_22105 IPR004753 Cell shape determining protein MreB H5404_22140 IPR012902 Prokaryotic N-terminal methylation site H5404_22150 IPR018076 Type II secretion system F domain H5404_22150 IPR003004 GspF/PilC family H5404_22150 IPR042094 Type II secretion system F domain superfamily H5404_22155 IPR042181 Type II secretion system, protein E, N-terminal H5404_22155 IPR007831 General secretory system II, protein E, N-terminal H5404_22155 IPR037257 General secretory system II, protein E, N-terminal superfamily H5404_22155 IPR001482 Type II/IV secretion system protein H5404_22155 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_22155 IPR013374 ATPase, type IV, pilus assembly, PilB H5404_22155 IPR003593 AAA+ ATPase domain H5404_22165 IPR003593 AAA+ ATPase domain H5404_22165 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_22165 IPR002477 Peptidoglycan binding-like H5404_22165 IPR036365 PGBD-like superfamily H5404_22165 IPR036366 PGBD superfamily H5404_22170 IPR021731 AMIN domain H5404_22170 IPR001775 GspD/PilQ family H5404_22170 IPR005644 NolW-like H5404_22170 IPR038591 NolW-like superfamily H5404_22170 IPR013355 Type IV pilus secretin PilQ H5404_22170 IPR004846 Type II/III secretion system H5404_22170 IPR004845 Type II secretion system GspD, conserved site H5404_22170 IPR011662 Secretin/TonB, short N-terminal domain H5404_22190 IPR035919 EAL domain superfamily H5404_22190 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 H5404_22190 IPR001633 EAL domain H5404_22190 IPR029787 Nucleotide cyclase H5404_22190 IPR000160 GGDEF domain H5404_22195 IPR011344 Single-stranded DNA-binding protein H5404_22195 IPR000424 Primosome PriB/single-strand DNA-binding H5404_22195 IPR012340 Nucleic acid-binding, OB-fold H5404_22200 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_22200 IPR000792 Transcription regulator LuxR, C-terminal H5404_22200 IPR016032 Signal transduction response regulator, C-terminal effector H5404_22205 IPR005835 Nucleotidyl transferase domain H5404_22205 IPR029044 Nucleotide-diphospho-sugar transferases H5404_22205 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type H5404_22210 IPR041552 UvrA DNA-binding domain H5404_22210 IPR004602 UvrABC system subunit A H5404_22210 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_22210 IPR017871 ABC transporter, conserved site H5404_22210 IPR041102 UvrA, interaction domain H5404_22210 IPR003439 ABC transporter-like H5404_22220 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site H5404_22220 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 H5404_22220 IPR015424 Pyridoxal phosphate-dependent transferase H5404_22220 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase H5404_22220 IPR015421 Pyridoxal phosphate-dependent transferase, major domain H5404_22220 IPR000192 Aminotransferase class V domain H5404_22225 IPR041745 Lysine-sensitive aspartokinase 3, N-terminal catalytic domain H5404_22225 IPR002912 ACT domain H5404_22225 IPR036393 Acetylglutamate kinase-like superfamily H5404_22225 IPR001048 Aspartate/glutamate/uridylate kinase H5404_22225 IPR005260 Aspartate kinase, monofunctional class H5404_22225 IPR001341 Aspartate kinase H5404_22225 IPR018042 Aspartate kinase, conserved site H5404_22230 IPR006158 Cobalamin (vitamin B12)-binding domain H5404_22230 IPR036724 Cobalamin-binding domain superfamily H5404_22230 IPR011005 Dihydropteroate synthase-like H5404_22230 IPR003726 Homocysteine-binding domain H5404_22230 IPR004223 Vitamin B12-dependent methionine synthase, activation domain H5404_22230 IPR011822 Cobalamin-dependent methionine synthase H5404_22230 IPR036594 Methionine synthase domain H5404_22230 IPR000489 Pterin-binding domain H5404_22230 IPR033706 Methionine synthase, B12-binding domain H5404_22230 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily H5404_22230 IPR036589 Homocysteine-binding domain superfamily H5404_22230 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain H5404_22235 IPR006153 Cation/H+ exchanger H5404_22235 IPR018422 Cation/H+ exchanger, CPA1 family H5404_22235 IPR038770 Sodium/solute symporter superfamily H5404_22245 IPR038717 Tc1-like transposase, DDE domain H5404_22330 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase H5404_22330 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold H5404_22330 IPR011800 Phosphoadenosine phosphosulphate reductase CysH H5404_22330 IPR002500 Phosphoadenosine phosphosulphate reductase H5404_22335 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit H5404_22335 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain H5404_22335 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily H5404_22335 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain H5404_22335 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site H5404_22340 IPR029039 Flavoprotein-like superfamily H5404_22340 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase H5404_22340 IPR017938 Riboflavin synthase-like beta-barrel H5404_22340 IPR001433 Oxidoreductase FAD/NAD(P)-binding H5404_22340 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain H5404_22340 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain H5404_22340 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding H5404_22340 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria H5404_22340 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily H5404_22340 IPR008254 Flavodoxin/nitric oxide synthase H5404_22340 IPR017927 FAD-binding domain, ferredoxin reductase-type H5404_22340 IPR001094 Flavodoxin-like H5404_22360 IPR035587 DUS-like, FMN-binding domain H5404_22360 IPR004653 tRNA-dihydrouridine(20/20a) synthase H5404_22360 IPR001269 tRNA-dihydrouridine synthase H5404_22360 IPR018517 tRNA-dihydrouridine synthase, conserved site H5404_22360 IPR013785 Aldolase-type TIM barrel H5404_22470 IPR025911 ToxN/AbiQ toxin H5404_22475 IPR002481 Ferric-uptake regulator H5404_22475 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_22475 IPR036390 Winged helix DNA-binding domain superfamily H5404_22485 IPR023096 Phosphoglucose isomerase, C-terminal H5404_22485 IPR035482 Phosphoglucose isomerase, SIS domain 2 H5404_22485 IPR001672 Phosphoglucose isomerase (PGI) H5404_22485 IPR018189 Phosphoglucose isomerase, conserved site H5404_22485 IPR035476 Phosphoglucose isomerase, SIS domain 1 H5404_22490 IPR001602 Uncharacterised protein family UPF0047 H5404_22490 IPR035917 YjbQ-like superfamily H5404_22500 IPR011079 Alanine racemase, C-terminal H5404_22500 IPR001608 Alanine racemase, N-terminal H5404_22500 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site H5404_22500 IPR029066 PLP-binding barrel H5404_22500 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal H5404_22500 IPR000821 Alanine racemase H5404_22505 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily H5404_22505 IPR007693 DNA helicase, DnaB-like, N-terminal H5404_22505 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_22505 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal H5404_22505 IPR003593 AAA+ ATPase domain H5404_22505 IPR007692 DNA helicase, DnaB type H5404_22505 IPR007694 DNA helicase, DnaB-like, C-terminal H5404_22515 IPR036935 Ribosomal protein L9, N-terminal domain superfamily H5404_22515 IPR020070 Ribosomal protein L9, N-terminal H5404_22515 IPR036791 Ribosomal protein L9, C-terminal domain superfamily H5404_22515 IPR020069 Ribosomal protein L9, C-terminal H5404_22515 IPR020594 Ribosomal protein L9, bacteria/chloroplast H5404_22515 IPR009027 Ribosomal protein L9/RNase H1, N-terminal H5404_22515 IPR000244 Ribosomal protein L9 H5404_22520 IPR001648 Ribosomal protein S18 H5404_22520 IPR018275 Ribosomal protein S18, conserved site H5404_22520 IPR036870 Ribosomal protein S18 superfamily H5404_22525 IPR023646 Primosomal replication protein PriB H5404_22525 IPR000424 Primosome PriB/single-strand DNA-binding H5404_22525 IPR012340 Nucleic acid-binding, OB-fold H5404_22530 IPR020815 Ribosomal protein S6, conserved site H5404_22530 IPR000529 Ribosomal protein S6 H5404_22530 IPR020814 Ribosomal protein S6, plastid/chloroplast H5404_22530 IPR035980 Ribosomal protein S6 superfamily H5404_22530 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 H5404_22535 IPR011060 Ribulose-phosphate binding barrel H5404_22535 IPR013785 Aldolase-type TIM barrel H5404_22535 IPR026019 Ribulose-phosphate 3-epimerase H5404_22535 IPR000056 Ribulose-phosphate 3-epimerase-like H5404_22540 IPR023095 Adenine-specific methyltransferase, domain 2 H5404_22540 IPR002052 DNA methylase, N-6 adenine-specific, conserved site H5404_22540 IPR012327 D12 class N6 adenine-specific DNA methyltransferase H5404_22540 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_22540 IPR012263 Adenine modification methylase, M.EcoRV-type H5404_22550 IPR030960 3-dehydroquinate synthase domain H5404_22550 IPR016037 3-dehydroquinate synthase AroB H5404_22550 IPR030963 3-dehydroquinate synthase family H5404_22555 IPR023000 Shikimate kinase, conserved site H5404_22555 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_22555 IPR031322 Shikimate kinase/gluconokinase H5404_22555 IPR000623 Shikimate kinase/Threonine synthase-like 1 H5404_22560 IPR038591 NolW-like superfamily H5404_22560 IPR004845 Type II secretion system GspD, conserved site H5404_22560 IPR004846 Type II/III secretion system H5404_22560 IPR011662 Secretin/TonB, short N-terminal domain H5404_22560 IPR013355 Type IV pilus secretin PilQ H5404_22560 IPR005644 NolW-like H5404_22560 IPR001775 GspD/PilQ family H5404_22560 IPR021731 AMIN domain H5404_22565 IPR007446 Pilus assembly protein PilP H5404_22575 IPR007813 Fimbrial assembly PilN H5404_22585 IPR001460 Penicillin-binding protein, transpeptidase H5404_22585 IPR036950 Penicillin binding protein transglycosylase domain H5404_22585 IPR023346 Lysozyme-like domain superfamily H5404_22585 IPR001264 Glycosyl transferase, family 51 H5404_22585 IPR012338 Beta-lactamase/transpeptidase-like H5404_22585 IPR031376 Penicillin-binding protein, OB-like domain H5404_22590 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_22590 IPR036390 Winged helix DNA-binding domain superfamily H5404_22590 IPR000847 Transcription regulator HTH, LysR H5404_22590 IPR005119 LysR, substrate-binding H5404_22595 IPR002109 Glutaredoxin H5404_22595 IPR036249 Thioredoxin-like superfamily H5404_22595 IPR013740 Redoxin H5404_22595 IPR037944 Peroxiredoxin-5-like H5404_22595 IPR014025 Glutaredoxin subgroup H5404_22595 IPR011767 Glutaredoxin active site H5404_22595 IPR011906 Glutaredoxin domain H5404_22605 IPR024083 Fumarase/histidase, N-terminal H5404_22605 IPR008948 L-Aspartase-like H5404_22605 IPR000182 GNAT domain H5404_22605 IPR016181 Acyl-CoA N-acyltransferase H5404_22605 IPR029419 Argininosuccinate lyase, C-terminal H5404_22605 IPR009049 Argininosuccinate lyase H5404_22605 IPR022761 Fumarate lyase, N-terminal H5404_22605 IPR020557 Fumarate lyase, conserved site H5404_22605 IPR011244 Bifunctional argininosuccinate lyase/acetyltransferase H5404_22605 IPR000362 Fumarate lyase family H5404_22610 IPR001518 Argininosuccinate synthase H5404_22610 IPR018223 Argininosuccinate synthase, conserved site H5404_22610 IPR023434 Argininosuccinate synthase, type 1 subfamily H5404_22610 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body H5404_22610 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold H5404_22615 IPR001048 Aspartate/glutamate/uridylate kinase H5404_22615 IPR037528 Acetylglutamate kinase ArgB H5404_22615 IPR004662 Acetylglutamate kinase family H5404_22615 IPR041731 N-Acetyl-L-glutamate kinase, noncyclic H5404_22615 IPR036393 Acetylglutamate kinase-like superfamily H5404_22620 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site H5404_22620 IPR000534 Semialdehyde dehydrogenase, NAD-binding H5404_22620 IPR036291 NAD(P)-binding domain superfamily H5404_22620 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 H5404_22620 IPR012280 Semialdehyde dehydrogenase, dimerisation domain H5404_22625 IPR011650 Peptidase M20, dimerisation domain H5404_22625 IPR010169 Acetylornithine deacetylase ArgE H5404_22625 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site H5404_22625 IPR002933 Peptidase M20 H5404_22625 IPR036264 Bacterial exopeptidase dimerisation domain H5404_22630 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type H5404_22630 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily H5404_22630 IPR033129 Phosphoenolpyruvate carboxylase, His active site H5404_22630 IPR021135 Phosphoenolpyruvate carboxylase H5404_22630 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site H5404_22640 IPR029041 FAD-linked oxidoreductase-like H5404_22640 IPR003171 Methylenetetrahydrofolate reductase H5404_22640 IPR004620 5,10-methylenetetrahydrofolate reductase H5404_22645 IPR041743 Bifunctional aspartokinase/homoserine dehydrogenase, N-terminal catalytic domain H5404_22645 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding H5404_22645 IPR018042 Aspartate kinase, conserved site H5404_22645 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I H5404_22645 IPR001342 Homoserine dehydrogenase, catalytic H5404_22645 IPR001048 Aspartate/glutamate/uridylate kinase H5404_22645 IPR001341 Aspartate kinase H5404_22645 IPR019811 Homoserine dehydrogenase, conserved site H5404_22645 IPR036393 Acetylglutamate kinase-like superfamily H5404_22645 IPR036291 NAD(P)-binding domain superfamily H5404_22650 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme H5404_22650 IPR011821 O-succinylhomoserine (thiol)-lyase H5404_22650 IPR015421 Pyridoxal phosphate-dependent transferase, major domain H5404_22650 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 H5404_22650 IPR015424 Pyridoxal phosphate-dependent transferase H5404_22655 IPR002084 Methionine repressor MetJ H5404_22655 IPR023453 Methionine repressor MetJ domain superfamily H5404_22655 IPR010985 Ribbon-helix-helix H5404_22660 IPR012301 Malic enzyme, N-terminal domain H5404_22660 IPR037062 Malic enzyme, N-terminal domain superfamily H5404_22660 IPR012302 Malic enzyme, NAD-binding H5404_22660 IPR015884 Malic enzyme, conserved site H5404_22660 IPR036291 NAD(P)-binding domain superfamily H5404_22660 IPR001891 Malic oxidoreductase H5404_22665 IPR002024 Bacterioferritin H5404_22665 IPR012347 Ferritin-like H5404_22665 IPR008331 Ferritin/DPS protein domain H5404_22665 IPR009078 Ferritin-like superfamily H5404_22665 IPR009040 Ferritin-like diiron domain H5404_22670 IPR041854 BFD-like [2Fe-2S]-binding domain superfamily H5404_22670 IPR007419 BFD-like [2Fe-2S]-binding domain H5404_22675 IPR009000 Translation protein, beta-barrel domain superfamily H5404_22675 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal H5404_22675 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle H5404_22675 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal H5404_22675 IPR005225 Small GTP-binding protein domain H5404_22675 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_22675 IPR031157 Tr-type G domain, conserved site H5404_22675 IPR033720 Elongation factor Tu, domain 2 H5404_22675 IPR004161 Translation elongation factor EFTu-like, domain 2 H5404_22675 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain H5404_22675 IPR000795 Transcription factor, GTP-binding domain H5404_22680 IPR009022 Elongation factor G, domain III H5404_22680 IPR020568 Ribosomal protein S5 domain 2-type fold H5404_22680 IPR041095 Elongation Factor G, domain II H5404_22680 IPR035647 EF-G domain III/V-like H5404_22680 IPR035649 EFG, domain V H5404_22680 IPR009000 Translation protein, beta-barrel domain superfamily H5404_22680 IPR000640 Elongation factor EFG, domain V-like H5404_22680 IPR005517 Translation elongation factor EFG/EF2, domain IV H5404_22680 IPR004161 Translation elongation factor EFTu-like, domain 2 H5404_22680 IPR031157 Tr-type G domain, conserved site H5404_22680 IPR000795 Transcription factor, GTP-binding domain H5404_22680 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_22680 IPR004540 Translation elongation factor EFG/EF2 H5404_22680 IPR005225 Small GTP-binding protein domain H5404_22680 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup H5404_22685 IPR023798 Ribosomal protein S7 domain H5404_22685 IPR000235 Ribosomal protein S5/S7 H5404_22685 IPR020606 Ribosomal protein S7, conserved site H5404_22685 IPR036823 Ribosomal protein S7 domain superfamily H5404_22685 IPR005717 Ribosomal protein S7, bacterial/organellar-type H5404_22690 IPR006032 Ribosomal protein S12/S23 H5404_22690 IPR005679 Ribosomal protein S12, bacterial-type H5404_22690 IPR012340 Nucleic acid-binding, OB-fold H5404_22695 IPR007215 Sulphur relay, TusB/DsrH H5404_22695 IPR023526 Sulphur relay, TusB H5404_22695 IPR027396 DsrEFH-like H5404_22700 IPR027396 DsrEFH-like H5404_22700 IPR017462 Sulphur relay, TusC/DsrF H5404_22700 IPR003787 Sulphur relay, DsrE/F-like protein H5404_22705 IPR003787 Sulphur relay, DsrE/F-like protein H5404_22705 IPR017463 Sulphur relay, TusD/DsrE H5404_22705 IPR027396 DsrEFH-like H5404_22710 IPR039445 Transcriptional regulator DauR-like, HTH domain H5404_22710 IPR039446 Transcriptional regulator DauR-like H5404_22710 IPR013559 YheO-like H5404_22715 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain H5404_22715 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily H5404_22715 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal H5404_22725 IPR007236 SlyX H5404_22730 IPR029055 Nucleophile aminohydrolases, N-terminal H5404_22730 IPR000246 Peptidase T2, asparaginase 2 H5404_22735 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain H5404_22745 IPR004771 K+/H+ exchanger H5404_22745 IPR003148 Regulator of K+ conductance, N-terminal H5404_22745 IPR020884 Glutathione-regulated potassium-efflux system protein KefB H5404_22745 IPR006153 Cation/H+ exchanger H5404_22745 IPR038770 Sodium/solute symporter superfamily H5404_22745 IPR036291 NAD(P)-binding domain superfamily H5404_22750 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG H5404_22750 IPR003680 Flavodoxin-like fold H5404_22750 IPR029039 Flavoprotein-like superfamily H5404_22755 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_22755 IPR003593 AAA+ ATPase domain H5404_22755 IPR032781 ABC-transporter extension domain H5404_22755 IPR003439 ABC transporter-like H5404_22755 IPR017871 ABC transporter, conserved site H5404_22765 IPR012020 AB hydrolase 4 family H5404_22765 IPR000073 Alpha/beta hydrolase fold-1 H5404_22765 IPR000952 AB hydrolase 4, conserved site H5404_22765 IPR029058 Alpha/Beta hydrolase fold H5404_22770 IPR036685 YehU-like superfamily H5404_22770 IPR010648 Uncharacterised protein family UPF0270 H5404_22775 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_22775 IPR006083 Phosphoribulokinase/uridine kinase H5404_22775 IPR006082 Phosphoribulokinase H5404_22780 IPR012318 Crp-type HTH domain H5404_22780 IPR000595 Cyclic nucleotide-binding domain H5404_22780 IPR018335 Transcription regulator HTH, Crp-type, conserved site H5404_22780 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_22780 IPR036390 Winged helix DNA-binding domain superfamily H5404_22780 IPR018488 Cyclic nucleotide-binding, conserved site H5404_22780 IPR014710 RmlC-like jelly roll fold H5404_22780 IPR018490 Cyclic nucleotide-binding-like H5404_22790 IPR016160 Aldehyde dehydrogenase, cysteine active site H5404_22790 IPR029510 Aldehyde dehydrogenase, glutamic acid active site H5404_22790 IPR016162 Aldehyde dehydrogenase, N-terminal H5404_22790 IPR016163 Aldehyde dehydrogenase, C-terminal H5404_22790 IPR016161 Aldehyde/histidinol dehydrogenase H5404_22790 IPR017649 Succinylglutamate-semialdehyde dehydrogenase H5404_22790 IPR015590 Aldehyde dehydrogenase domain H5404_22795 IPR007041 Arginine N-succinyltransferase AstA/AruG H5404_22795 IPR017650 Arginine N-succinyltransferase H5404_22795 IPR016181 Acyl-CoA N-acyltransferase H5404_22800 IPR005814 Aminotransferase class-III H5404_22800 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 H5404_22800 IPR004636 Acetylornithine/Succinylornithine transaminase family H5404_22800 IPR015421 Pyridoxal phosphate-dependent transferase, major domain H5404_22800 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria H5404_22800 IPR015424 Pyridoxal phosphate-dependent transferase H5404_22805 IPR017926 Glutamine amidotransferase H5404_22805 IPR029062 Class I glutamine amidotransferase-like H5404_22805 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain H5404_22820 IPR002305 Aminoacyl-tRNA synthetase, class Ic H5404_22820 IPR002306 Tryptophan-tRNA ligase H5404_22820 IPR024109 Tryptophan-tRNA ligase, bacterial-type H5404_22820 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold H5404_22825 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic H5404_22825 IPR023198 Phosphoglycolate phosphatase-like, domain 2 H5404_22825 IPR023214 HAD superfamily H5404_22825 IPR041492 Haloacid dehalogenase-like hydrolase H5404_22825 IPR006439 HAD hydrolase, subfamily IA H5404_22825 IPR036412 HAD-like superfamily H5404_22825 IPR037512 Phosphoglycolate phosphatase, prokaryotic H5404_22825 IPR006549 HAD-superfamily hydrolase,subfamily IIIA H5404_22830 IPR029028 Alpha/beta knot methyltransferases H5404_22830 IPR029064 50S ribosomal protein L30e-like H5404_22830 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal H5404_22830 IPR013123 RNA 2-O ribose methyltransferase, substrate binding H5404_22830 IPR001537 tRNA/rRNA methyltransferase, SpoU type H5404_22830 IPR004441 RNA methyltransferase TrmH family H5404_22830 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB H5404_22835 IPR012340 Nucleic acid-binding, OB-fold H5404_22835 IPR013223 Ribonuclease B, N-terminal OB domain H5404_22835 IPR001900 Ribonuclease II/R H5404_22835 IPR022966 Ribonuclease II/R, conserved site H5404_22835 IPR040476 RNase II/RNase R, cold shock domain H5404_22835 IPR011129 Cold shock domain H5404_22835 IPR004476 Ribonuclease II/ribonuclease R H5404_22835 IPR011805 Ribonuclease R H5404_22835 IPR022967 RNA-binding domain, S1 H5404_22835 IPR003029 S1 domain H5404_22835 IPR013668 Ribonuclease R winged-helix domain H5404_22840 IPR036390 Winged helix DNA-binding domain superfamily H5404_22840 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_22840 IPR023761 Transcriptional repressor HTH, NsrR H5404_22840 IPR000944 Transcription regulator Rrf2-type H5404_22840 IPR030489 Transcription regulator Rrf2-type, conserved site H5404_22845 IPR001433 Oxidoreductase FAD/NAD(P)-binding H5404_22845 IPR017938 Riboflavin synthase-like beta-barrel H5404_22845 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain H5404_22845 IPR023950 Flavohemoprotein H5404_22845 IPR012292 Globin/Protoglobin H5404_22845 IPR009050 Globin-like superfamily H5404_22845 IPR000971 Globin H5404_22845 IPR017927 FAD-binding domain, ferredoxin reductase-type H5404_22845 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase H5404_22845 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain H5404_22850 IPR006597 Sel1-like repeat H5404_22850 IPR011990 Tetratricopeptide-like helical domain superfamily H5404_22855 IPR001114 Adenylosuccinate synthetase H5404_22855 IPR018220 Adenylosuccinate synthase, GTP-binding site H5404_22855 IPR033128 Adenylosuccinate synthase, active site H5404_22855 IPR042109 Adenylosuccinate synthetase, domain 1 H5404_22855 IPR042110 Adenylosuccinate synthetase, domain 2 H5404_22855 IPR042111 Adenylosuccinate synthetase, domain 3 H5404_22855 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_22860 IPR019201 Protein of unknown function DUF2065 H5404_22865 IPR001107 Band 7 domain H5404_22865 IPR010200 HflC H5404_22865 IPR036013 Band 7/SPFH domain superfamily H5404_22870 IPR001107 Band 7 domain H5404_22870 IPR036013 Band 7/SPFH domain superfamily H5404_22870 IPR001972 Stomatin family H5404_22870 IPR020980 Menbrane protein HflK, N-terminal H5404_22870 IPR010201 HflK H5404_22875 IPR016496 GTPase HflX H5404_22875 IPR032305 GTP-binding protein, middle domain H5404_22875 IPR006073 GTP binding domain H5404_22875 IPR025121 GTPase HflX, N-terminal H5404_22875 IPR035647 EF-G domain III/V-like H5404_22875 IPR042108 GTPase HflX, N-terminal domain superfamily H5404_22875 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_22875 IPR030394 HflX-type guanine nucleotide-binding (G) domain H5404_22880 IPR005001 RNA-binding protein Hfq H5404_22880 IPR010920 LSM domain superfamily H5404_22885 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_22885 IPR018022 IPP transferase H5404_22885 IPR039657 Dimethylallyltransferase H5404_22890 IPR042120 MutL, C-terminal domain, dimerisation subdomain H5404_22890 IPR042121 MutL, C-terminal domain, regulatory subdomain H5404_22890 IPR037198 MutL, C-terminal domain superfamily H5404_22890 IPR014762 DNA mismatch repair, conserved site H5404_22890 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup H5404_22890 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_22890 IPR013507 DNA mismatch repair protein, S5 domain 2-like H5404_22890 IPR002099 DNA mismatch repair protein family, N-terminal H5404_22890 IPR020667 DNA mismatch repair protein, MutL H5404_22890 IPR020568 Ribosomal protein S5 domain 2-type fold H5404_22890 IPR038973 DNA mismatch repair protein MutL/Mlh/Pms H5404_22890 IPR014790 MutL, C-terminal, dimerisation H5404_22895 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain H5404_22900 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE H5404_22900 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_22905 IPR004453 Epoxyqueuosine reductase QueG H5404_22905 IPR013542 Domain of unknown function DUF1730 H5404_22905 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site H5404_22905 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain H5404_22975 IPR012337 Ribonuclease H-like superfamily H5404_22975 IPR036397 Ribonuclease H superfamily H5404_22975 IPR013520 Exonuclease, RNase T/DNA polymerase III H5404_22975 IPR022894 Oligoribonuclease H5404_22980 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_22980 IPR010914 RsgA GTPase domain H5404_22980 IPR004881 Ribosome biogenesis GTPase RsgA H5404_22980 IPR030378 Circularly permuted (CP)-type guanine nucleotide-binding (G) domain H5404_22985 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 H5404_22985 IPR033177 Phosphatidylserine decarboxylase H5404_22985 IPR003817 Phosphatidylserine decarboxylase-related H5404_22990 IPR031312 Sodium/sulphate symporter, conserved site H5404_22990 IPR001898 Solute carrier family 13 H5404_22995 IPR004090 Chemotaxis methyl-accepting receptor H5404_22995 IPR003660 HAMP domain H5404_22995 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain H5404_23005 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent H5404_23005 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily H5404_23005 IPR017850 Alkaline-phosphatase-like, core domain superfamily H5404_23005 IPR011258 BPG-independent PGAM, N-terminal H5404_23005 IPR006124 Metalloenzyme H5404_23010 IPR001763 Rhodanese-like domain H5404_23010 IPR036873 Rhodanese-like domain superfamily H5404_23015 IPR003708 Bacterial protein export chaperone SecB H5404_23015 IPR035958 SecB-like superfamily H5404_23020 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent H5404_23020 IPR013328 6-phosphogluconate dehydrogenase, domain 2 H5404_23020 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily H5404_23020 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal H5404_23020 IPR036291 NAD(P)-binding domain superfamily H5404_23020 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal H5404_23025 IPR005881 Serine O-acetyltransferase H5404_23025 IPR042122 Serine acetyltransferase, N-terminal domain superfamily H5404_23025 IPR010493 Serine acetyltransferase, N-terminal H5404_23025 IPR018357 Hexapeptide transferase, conserved site H5404_23025 IPR001451 Hexapeptide repeat H5404_23025 IPR011004 Trimeric LpxA-like superfamily H5404_23030 IPR011055 Duplicated hybrid motif H5404_23030 IPR016047 Peptidase M23 H5404_23040 IPR023772 DNA-binding HTH domain, TetR-type, conserved site H5404_23040 IPR009057 Homeobox-like domain superfamily H5404_23040 IPR001647 DNA-binding HTH domain, TetR-type H5404_23040 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily H5404_23040 IPR013571 Transcription regulator QacR, C-terminal H5404_23050 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) H5404_23050 IPR006195 Aminoacyl-tRNA synthetase, class II H5404_23050 IPR004525 Elongation factor P--(R)-beta-lysine ligase H5404_23055 IPR036188 FAD/NAD(P)-binding domain superfamily H5404_23055 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site H5404_23055 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily H5404_23055 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal H5404_23055 IPR005884 Fumarate reductase, flavoprotein subunit H5404_23055 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit H5404_23055 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain H5404_23055 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily H5404_23060 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain H5404_23060 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain H5404_23060 IPR012675 Beta-grasp domain superfamily H5404_23060 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site H5404_23060 IPR009051 Alpha-helical ferredoxin H5404_23060 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein H5404_23060 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal H5404_23060 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site H5404_23060 IPR036010 2Fe-2S ferredoxin-like superfamily H5404_23065 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit H5404_23065 IPR003510 Fumarate reductase, subunit C H5404_23070 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit H5404_23070 IPR003418 Fumarate reductase, subunit D H5404_23080 IPR015365 Elongation factor P, C-terminal H5404_23080 IPR011768 Translation elongation factor P H5404_23080 IPR013852 Translation elongation factor P/YeiP, conserved site H5404_23080 IPR001059 Translation elongation factor P/YeiP, central H5404_23080 IPR020599 Translation elongation factor P/YeiP H5404_23080 IPR014722 Ribosomal protein L2, domain 2 H5404_23080 IPR012340 Nucleic acid-binding, OB-fold H5404_23080 IPR008991 Translation protein SH3-like domain superfamily H5404_23080 IPR013185 Translation elongation factor, KOW-like H5404_23085 IPR013785 Aldolase-type TIM barrel H5404_23085 IPR022462 Lysine-2,3-aminomutase-like H5404_23085 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase H5404_23085 IPR007197 Radical SAM H5404_23090 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site H5404_23090 IPR001608 Alanine racemase, N-terminal H5404_23090 IPR011079 Alanine racemase, C-terminal H5404_23090 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal H5404_23090 IPR029066 PLP-binding barrel H5404_23090 IPR000821 Alanine racemase H5404_23095 IPR003416 MgtC/SapB/SrpB/YhiD family H5404_23105 IPR027409 GroEL-like apical domain superfamily H5404_23105 IPR018370 Chaperonin Cpn60, conserved site H5404_23105 IPR001844 Chaperonin Cpn60 H5404_23105 IPR027410 TCP-1-like chaperonin intermediate domain superfamily H5404_23105 IPR002423 Chaperonin Cpn60/TCP-1 family H5404_23105 IPR027413 GroEL-like equatorial domain superfamily H5404_23110 IPR037124 GroES chaperonin superfamily H5404_23110 IPR020818 GroES chaperonin family H5404_23110 IPR011032 GroES-like superfamily H5404_23110 IPR018369 Chaperonin GroES, conserved site H5404_23115 IPR002528 Multi antimicrobial extrusion protein H5404_23120 IPR035966 Phosphofructokinase superfamily H5404_23120 IPR000023 Phosphofructokinase domain H5404_23120 IPR015912 Phosphofructokinase, conserved site H5404_23120 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic H5404_23120 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type H5404_23120 IPR022953 ATP-dependent 6-phosphofructokinase H5404_23125 IPR027470 Cation efflux protein, cytoplasmic domain H5404_23125 IPR027469 Cation efflux transmembrane domain superfamily H5404_23125 IPR023783 Cation efflux pump FieF H5404_23125 IPR002524 Cation efflux protein H5404_23125 IPR036837 Cation efflux protein, cytoplasmic domain superfamily H5404_23130 IPR012899 LTXXQ motif family protein H5404_23135 IPR001789 Signal transduction response regulator, receiver domain H5404_23135 IPR011006 CheY-like superfamily H5404_23135 IPR001867 OmpR/PhoB-type DNA-binding domain H5404_23135 IPR039420 Transcriptional regulatory protein WalR-like H5404_23135 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_23140 IPR003660 HAMP domain H5404_23140 IPR003594 Histidine kinase/HSP90-like ATPase H5404_23140 IPR004358 Signal transduction histidine kinase-related protein, C-terminal H5404_23140 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily H5404_23140 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain H5404_23140 IPR032404 Two-component sensor protein CpxA, periplasmic domain H5404_23140 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_23140 IPR005467 Histidine kinase domain H5404_23140 IPR038515 CpxA, periplasmic domain superfamily H5404_23145 IPR019833 Manganese/iron superoxide dismutase, binding site H5404_23145 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily H5404_23145 IPR019831 Manganese/iron superoxide dismutase, N-terminal H5404_23145 IPR019832 Manganese/iron superoxide dismutase, C-terminal H5404_23145 IPR001189 Manganese/iron superoxide dismutase H5404_23145 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily H5404_23150 IPR001537 tRNA/rRNA methyltransferase, SpoU type H5404_23150 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase H5404_23150 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal H5404_23150 IPR029028 Alpha/beta knot methyltransferases H5404_23155 IPR007313 FxsA cytoplasmic membrane protein H5404_23160 IPR020557 Fumarate lyase, conserved site H5404_23160 IPR008948 L-Aspartase-like H5404_23160 IPR000362 Fumarate lyase family H5404_23160 IPR004708 Aspartate ammonia-lyase H5404_23160 IPR024083 Fumarase/histidase, N-terminal H5404_23160 IPR018951 Fumarase C, C-terminal H5404_23160 IPR022761 Fumarate lyase, N-terminal H5404_23165 IPR004668 Anaerobic c4-dicarboxylate membrane transporter H5404_23170 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain H5404_23170 IPR035671 DsbD gamma H5404_23170 IPR013766 Thioredoxin domain H5404_23170 IPR036249 Thioredoxin-like superfamily H5404_23170 IPR017937 Thioredoxin, conserved site H5404_23170 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily H5404_23170 IPR022910 Thiol:disulphide interchange protein DsbD H5404_23170 IPR003834 Cytochrome C biogenesis protein, transmembrane domain H5404_23175 IPR011006 CheY-like superfamily H5404_23175 IPR016032 Signal transduction response regulator, C-terminal effector H5404_23175 IPR000792 Transcription regulator LuxR, C-terminal H5404_23175 IPR001789 Signal transduction response regulator, receiver domain H5404_23180 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily H5404_23180 IPR006037 Regulator of K+ conductance, C-terminal H5404_23180 IPR030151 K(+)/H(+) antiporter NhaP H5404_23180 IPR005170 Transporter-associated domain H5404_23180 IPR006153 Cation/H+ exchanger H5404_23180 IPR036318 FAD-binding, type PCMH-like superfamily H5404_23180 IPR016169 FAD-binding, type PCMH, subdomain 2 H5404_23180 IPR038770 Sodium/solute symporter superfamily H5404_23180 IPR023729 K(+)/H(+) antiporter NhaP2 H5404_23190 IPR038377 Sodium/glucose symporter superfamily H5404_23190 IPR001734 Sodium/solute symporter H5404_23190 IPR019899 Sodium/solute symporter, VC2705 subfamily H5404_23205 IPR000362 Fumarate lyase family H5404_23205 IPR005677 Fumarate hydratase, class II H5404_23205 IPR008948 L-Aspartase-like H5404_23205 IPR018951 Fumarase C, C-terminal H5404_23205 IPR022761 Fumarate lyase, N-terminal H5404_23205 IPR024083 Fumarase/histidase, N-terminal H5404_23205 IPR020557 Fumarate lyase, conserved site H5404_23210 IPR011006 CheY-like superfamily H5404_23210 IPR003660 HAMP domain H5404_23210 IPR003594 Histidine kinase/HSP90-like ATPase H5404_23210 IPR036890 Histidine kinase/HSP90-like ATPase superfamily H5404_23210 IPR038188 TorS, sensor domain superfamily H5404_23210 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain H5404_23210 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily H5404_23210 IPR036641 HPT domain superfamily H5404_23210 IPR037952 Sensor histidine kinase TorS, sensor domain H5404_23210 IPR001789 Signal transduction response regulator, receiver domain H5404_23210 IPR005467 Histidine kinase domain H5404_23210 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain H5404_23210 IPR004358 Signal transduction histidine kinase-related protein, C-terminal H5404_23215 IPR024989 Major facilitator superfamily associated domain H5404_23215 IPR026032 Probable 3-phenylpropionic acid transporter H5404_23215 IPR036259 MFS transporter superfamily H5404_23230 IPR011904 Acetate-CoA ligase H5404_23230 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain H5404_23230 IPR025110 AMP-binding enzyme, C-terminal domain H5404_23230 IPR000873 AMP-dependent synthetase/ligase H5404_23230 IPR042099 AMP-dependent synthetase-like superfamily H5404_23230 IPR020845 AMP-binding, conserved site H5404_23235 IPR001874 Dehydroquinase, class II H5404_23235 IPR036441 Dehydroquinase, class II superfamily H5404_23235 IPR018509 Dehydroquinase, class II, conserved site H5404_23240 IPR011053 Single hybrid motif H5404_23240 IPR000089 Biotin/lipoyl attachment H5404_23240 IPR001882 Biotin-binding site H5404_23240 IPR001249 Acetyl-CoA biotin carboxyl carrier H5404_23245 IPR013815 ATP-grasp fold, subdomain 1 H5404_23245 IPR011761 ATP-grasp fold H5404_23245 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase H5404_23245 IPR011764 Biotin carboxylation domain H5404_23245 IPR005482 Biotin carboxylase, C-terminal H5404_23245 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain H5404_23245 IPR016185 Pre-ATP-grasp domain superfamily H5404_23245 IPR005481 Biotin carboxylase-like, N-terminal domain H5404_23245 IPR011054 Rudiment single hybrid motif H5404_23250 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_23250 IPR004498 Ribosomal protein L11 methyltransferase H5404_23255 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal H5404_23255 IPR001269 tRNA-dihydrouridine synthase H5404_23255 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 H5404_23255 IPR032887 tRNA-dihydrouridine synthase B H5404_23255 IPR035587 DUS-like, FMN-binding domain H5404_23255 IPR013785 Aldolase-type TIM barrel H5404_23255 IPR018517 tRNA-dihydrouridine synthase, conserved site H5404_23260 IPR009057 Homeobox-like domain superfamily H5404_23260 IPR002197 DNA binding HTH domain, Fis-type H5404_23260 IPR005412 DNA-binding protein Fis H5404_23265 IPR011701 Major facilitator superfamily H5404_23265 IPR020846 Major facilitator superfamily domain H5404_23265 IPR036259 MFS transporter superfamily H5404_23265 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG H5404_23275 IPR000160 GGDEF domain H5404_23275 IPR007894 MASE2 H5404_23275 IPR029787 Nucleotide cyclase H5404_23280 IPR038717 Tc1-like transposase, DDE domain H5404_23340 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 H5404_23340 IPR015421 Pyridoxal phosphate-dependent transferase, major domain H5404_23340 IPR015424 Pyridoxal phosphate-dependent transferase H5404_23340 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily H5404_23340 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal H5404_23340 IPR000310 Orn/Lys/Arg decarboxylase, major domain H5404_23340 IPR011193 Ornithine/lysine/arginine decarboxylase H5404_23340 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal H5404_23345 IPR002293 Amino acid/polyamine transporter I H5404_23345 IPR004754 Amino acid antiporter H5404_23350 IPR040970 CadC C-terminal domain 1 H5404_23350 IPR001867 OmpR/PhoB-type DNA-binding domain H5404_23350 IPR016032 Signal transduction response regulator, C-terminal effector H5404_23350 IPR011990 Tetratricopeptide-like helical domain superfamily H5404_23350 IPR039420 Transcriptional regulatory protein WalR-like H5404_23350 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_23355 IPR000551 MerR-type HTH domain H5404_23355 IPR011788 Zn(II)-responsive transcriptional regulator H5404_23355 IPR009061 Putative DNA-binding domain superfamily H5404_23360 IPR002695 Bifunctional purine biosynthesis protein PurH-like H5404_23360 IPR024051 AICAR transformylase, duplicated domain superfamily H5404_23360 IPR016193 Cytidine deaminase-like H5404_23360 IPR011607 Methylglyoxal synthase-like domain H5404_23360 IPR036914 Methylglyoxal synthase-like domain superfamily H5404_23365 IPR020559 Phosphoribosylglycinamide synthetase, conserved site H5404_23365 IPR000115 Phosphoribosylglycinamide synthetase H5404_23365 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain H5404_23365 IPR016185 Pre-ATP-grasp domain superfamily H5404_23365 IPR013815 ATP-grasp fold, subdomain 1 H5404_23365 IPR011761 ATP-grasp fold H5404_23365 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal H5404_23365 IPR011054 Rudiment single hybrid motif H5404_23365 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily H5404_23365 IPR020560 Phosphoribosylglycinamide synthetase, C-domain H5404_23375 IPR020816 Histone-like DNA-binding protein, conserved site H5404_23375 IPR000119 Histone-like DNA-binding protein H5404_23375 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily H5404_23380 IPR000644 CBS domain H5404_23380 IPR002550 CNNM, transmembrane domain H5404_23385 IPR007338 Protein of unknown function DUF416 H5404_23385 IPR023381 YP001051499.1-like domain superfamily H5404_23390 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain H5404_23390 IPR023514 Glyoxylate/hydroxypyruvate reductase A H5404_23390 IPR036291 NAD(P)-binding domain superfamily H5404_23390 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site H5404_23395 IPR005122 Uracil-DNA glycosylase-like H5404_23395 IPR036895 Uracil-DNA glycosylase-like domain superfamily H5404_23400 IPR006361 Uroporphyrinogen decarboxylase HemE H5404_23400 IPR038071 UROD/MetE-like superfamily H5404_23400 IPR000257 Uroporphyrinogen decarboxylase (URO-D) H5404_23415 IPR015376 Zinc ribbon, NADH pyrophosphatase H5404_23415 IPR020084 NUDIX hydrolase, conserved site H5404_23415 IPR000086 NUDIX hydrolase domain H5404_23415 IPR022925 NADH pyrophosphatase NudC H5404_23415 IPR015797 NUDIX hydrolase-like domain superfamily H5404_23420 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd H5404_23420 IPR038309 Rsd/AlgQ superfamily H5404_23420 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ H5404_23425 IPR038120 RNA polymerase Rpb1, funnel domain superfamily H5404_23425 IPR007081 RNA polymerase Rpb1, domain 5 H5404_23425 IPR007083 RNA polymerase Rpb1, domain 4 H5404_23425 IPR042102 RNA polymerase Rpb1, domain 3 superfamily H5404_23425 IPR007066 RNA polymerase Rpb1, domain 3 H5404_23425 IPR007080 RNA polymerase Rpb1, domain 1 H5404_23425 IPR006592 RNA polymerase, N-terminal H5404_23425 IPR012754 DNA-directed RNA polymerase, subunit beta-prime H5404_23425 IPR000722 RNA polymerase, alpha subunit H5404_23430 IPR007645 RNA polymerase Rpb2, domain 3 H5404_23430 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type H5404_23430 IPR007121 RNA polymerase, beta subunit, conserved site H5404_23430 IPR015712 DNA-directed RNA polymerase, subunit 2 H5404_23430 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain H5404_23430 IPR007641 RNA polymerase Rpb2, domain 7 H5404_23430 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily H5404_23430 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain H5404_23430 IPR007644 RNA polymerase, beta subunit, protrusion H5404_23430 IPR007642 RNA polymerase Rpb2, domain 2 H5404_23430 IPR037034 RNA polymerase Rpb2, domain 2 superfamily H5404_23430 IPR014724 RNA polymerase Rpb2, OB-fold H5404_23435 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily H5404_23435 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like H5404_23435 IPR000206 Ribosomal protein L7/L12 H5404_23435 IPR013823 Ribosomal protein L7/L12, C-terminal H5404_23435 IPR008932 Ribosomal protein L7/L12, oligomerisation H5404_23440 IPR001790 Ribosomal protein L10P H5404_23440 IPR022973 Ribosomal protein L10 H5404_23445 IPR002143 Ribosomal protein L1 H5404_23445 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein H5404_23445 IPR023673 Ribosomal protein L1, conserved site H5404_23445 IPR023674 Ribosomal protein L1-like H5404_23445 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich H5404_23445 IPR005878 Ribosomal protein L1, bacterial-type H5404_23450 IPR036769 Ribosomal protein L11, C-terminal domain superfamily H5404_23450 IPR020784 Ribosomal protein L11, N-terminal H5404_23450 IPR000911 Ribosomal protein L11/L12 H5404_23450 IPR006519 Ribosomal protein L11, bacterial-type H5404_23450 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily H5404_23450 IPR020783 Ribosomal protein L11, C-terminal H5404_23450 IPR020785 Ribosomal protein L11, conserved site H5404_23455 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site H5404_23455 IPR008991 Translation protein SH3-like domain superfamily H5404_23455 IPR006645 NusG, N-terminal H5404_23455 IPR001062 Transcription antitermination protein, NusG H5404_23455 IPR005824 KOW H5404_23455 IPR014722 Ribosomal protein L2, domain 2 H5404_23455 IPR036735 NusG, N-terminal domain superfamily H5404_23460 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit H5404_23460 IPR005807 SecE subunit of protein translocation complex, bacterial-like H5404_23460 IPR038379 SecE superfamily H5404_23465 IPR033720 Elongation factor Tu, domain 2 H5404_23465 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_23465 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle H5404_23465 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal H5404_23465 IPR009000 Translation protein, beta-barrel domain superfamily H5404_23465 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal H5404_23465 IPR031157 Tr-type G domain, conserved site H5404_23465 IPR005225 Small GTP-binding protein domain H5404_23465 IPR004161 Translation elongation factor EFTu-like, domain 2 H5404_23465 IPR041709 Elongation factor Tu (EF-Tu), GTP-binding domain H5404_23465 IPR000795 Transcription factor, GTP-binding domain H5404_23490 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_23490 IPR004566 Pantothenate kinase H5404_23490 IPR006083 Phosphoribulokinase/uridine kinase H5404_23495 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain H5404_23495 IPR003142 Biotin protein ligase, C-terminal H5404_23495 IPR004409 Biotin operon repressor, helix-turn-helix domain H5404_23495 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_23495 IPR036390 Winged helix DNA-binding domain superfamily H5404_23495 IPR004408 Biotin--acetyl-CoA-carboxylase ligase H5404_23495 IPR030855 Bifunctional ligase/repressor BirA H5404_23495 IPR013196 Helix-turn-helix, type 11 H5404_23495 IPR008988 Transcriptional repressor, C-terminal H5404_23500 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily H5404_23500 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal H5404_23500 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase H5404_23500 IPR016169 FAD-binding, type PCMH, subdomain 2 H5404_23500 IPR016167 FAD-binding, type PCMH, subdomain 1 H5404_23500 IPR036318 FAD-binding, type PCMH-like superfamily H5404_23500 IPR016166 FAD-binding domain, PCMH-type H5404_23500 IPR006094 FAD linked oxidase, N-terminal H5404_23510 IPR016270 CDP-alcohol phosphatidyltransferase class-II family H5404_23510 IPR025202 Phospholipase D-like domain H5404_23510 IPR001736 Phospholipase D/Transphosphatidylase H5404_23545 IPR004391 Glutamate racemase H5404_23545 IPR015942 Asp/Glu/hydantoin racemase H5404_23545 IPR001920 Asp/Glu racemase H5404_23545 IPR018187 Asp/Glu racemase, active site 1 H5404_23555 IPR010917 TonB-dependent receptor, conserved site H5404_23555 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily H5404_23555 IPR010916 TonB box, conserved site H5404_23555 IPR037066 TonB-dependent receptor, plug domain superfamily H5404_23555 IPR012910 TonB-dependent receptor, plug domain H5404_23555 IPR039426 Vitamin B12 transporter BtuB-like H5404_23555 IPR010101 TonB-dependent vitamin B12 transporter BtuB H5404_23555 IPR000531 TonB-dependent receptor-like, beta-barrel H5404_23560 IPR030390 RNA methyltransferase TrmA, active site H5404_23560 IPR010280 (Uracil-5)-methyltransferase family H5404_23560 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA H5404_23560 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_23560 IPR030391 RNA methyltransferase TrmA, conserved site H5404_23570 IPR009057 Homeobox-like domain superfamily H5404_23570 IPR001647 DNA-binding HTH domain, TetR-type H5404_23570 IPR023764 Transcriptional repressor HTH, FabR H5404_23575 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H5404_23575 IPR022962 Soluble pyridine nucleotide transhydrogenase H5404_23575 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I H5404_23575 IPR023753 FAD/NAD(P)-binding domain H5404_23575 IPR036188 FAD/NAD(P)-binding domain superfamily H5404_23575 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily H5404_23580 IPR002528 Multi antimicrobial extrusion protein H5404_23585 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_23585 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp H5404_23585 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP H5404_23590 IPR036286 LexA/Signal peptidase-like superfamily H5404_23590 IPR036390 Winged helix DNA-binding domain superfamily H5404_23590 IPR006199 LexA repressor, DNA-binding domain H5404_23590 IPR039418 LexA-like H5404_23590 IPR006200 Transcription regulator LexA H5404_23590 IPR006197 Peptidase S24, LexA-like H5404_23590 IPR015927 Peptidase S24/S26A/S26B/S26C H5404_23590 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_23595 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase H5404_23595 IPR041728 GPAT/DHAPAT, acyltransferase domain H5404_23595 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB H5404_23595 IPR002123 Phospholipid/glycerol acyltransferase H5404_23600 IPR006370 4-hydroxybenzoate polyprenyltransferase-like H5404_23600 IPR000537 UbiA prenyltransferase family H5404_23600 IPR039653 Prenyltransferase H5404_23605 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily H5404_23605 IPR007440 Chorismate--pyruvate lyase H5404_23610 IPR005503 Flagellar basal body-associated protein FliL H5404_23615 IPR023662 Rhomboid protease GlpG H5404_23615 IPR035952 Rhomboid-like superfamily H5404_23615 IPR022764 Peptidase S54, rhomboid domain H5404_23615 IPR022732 Peptidase S54, GlpG peptidase, N-terminal H5404_23615 IPR038236 GlpG peptidase, N-terminal domain superfamily H5404_23620 IPR001763 Rhodanese-like domain H5404_23620 IPR023695 Thiosulfate sulfurtransferase, bacterial H5404_23620 IPR036873 Rhodanese-like domain superfamily H5404_23625 IPR007627 RNA polymerase sigma-70 region 2 H5404_23625 IPR013324 RNA polymerase sigma factor, region 3/4-like H5404_23625 IPR013325 RNA polymerase sigma factor, region 2 H5404_23625 IPR007630 RNA polymerase sigma-70 region 4 H5404_23625 IPR009042 RNA polymerase sigma-70 region 1.2 H5404_23625 IPR014284 RNA polymerase sigma-70 like domain H5404_23625 IPR000943 RNA polymerase sigma-70 H5404_23625 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria H5404_23630 IPR040690 FtsX, extracellular domain H5404_23630 IPR004513 Cell division protein FtsX H5404_23635 IPR017871 ABC transporter, conserved site H5404_23635 IPR003593 AAA+ ATPase domain H5404_23635 IPR003439 ABC transporter-like H5404_23635 IPR005286 Cell division protein FtsE, ATP-binding H5404_23635 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_23640 IPR003593 AAA+ ATPase domain H5404_23640 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain H5404_23640 IPR013822 Signal recognition particle SRP54, helical bundle H5404_23640 IPR042101 Signal recognition particle SRP54, N-terminal domain superfamily H5404_23640 IPR004390 Signal-recognition particle receptor FtsY H5404_23640 IPR036225 SRP/SRP receptor, N-terminal H5404_23640 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_23645 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_23645 IPR004398 RNA methyltransferase, RsmD H5404_23645 IPR002052 DNA methylase, N-6 adenine-specific, conserved site H5404_23655 IPR002771 Multiple antibiotic resistance (MarC)-related H5404_23705 IPR036291 NAD(P)-binding domain superfamily H5404_23705 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site H5404_23705 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain H5404_23705 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain H5404_23705 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I H5404_23705 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family H5404_23710 IPR001845 HTH ArsR-type DNA-binding domain H5404_23710 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_23710 IPR036390 Winged helix DNA-binding domain superfamily H5404_23710 IPR011991 ArsR-like helix-turn-helix domain H5404_23715 IPR035919 EAL domain superfamily H5404_23715 IPR013976 Metal-dependent hydrolase HDOD H5404_23715 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing H5404_23715 IPR001633 EAL domain H5404_23720 IPR001123 Amino acid exporter protein, LeuE-type H5404_23725 IPR029058 Alpha/Beta hydrolase fold H5404_23725 IPR022742 Serine aminopeptidase, S33 H5404_23730 IPR036412 HAD-like superfamily H5404_23730 IPR006379 HAD-superfamily hydrolase, subfamily IIB H5404_23730 IPR023214 HAD superfamily H5404_23730 IPR000150 Cof family H5404_23745 IPR039262 DTW domain-containing protein 2 H5404_23745 IPR005636 DTW H5404_23750 IPR000160 GGDEF domain H5404_23750 IPR035919 EAL domain superfamily H5404_23750 IPR001633 EAL domain H5404_23750 IPR013702 FIST domain, N-terminal H5404_23750 IPR019494 FIST, C-domain H5404_23750 IPR029787 Nucleotide cyclase H5404_23755 IPR036412 HAD-like superfamily H5404_23755 IPR006439 HAD hydrolase, subfamily IA H5404_23755 IPR041492 Haloacid dehalogenase-like hydrolase H5404_23755 IPR023214 HAD superfamily H5404_23760 IPR011931 Tyrosine recombinase XerC H5404_23760 IPR013762 Integrase-like, catalytic domain superfamily H5404_23760 IPR010998 Integrase/recombinase, N-terminal H5404_23760 IPR023009 Tyrosine recombinase XerC/XerD H5404_23760 IPR004107 Integrase, SAM-like, N-terminal H5404_23760 IPR002104 Integrase, catalytic domain H5404_23760 IPR011010 DNA breaking-rejoining enzyme, catalytic core H5404_23770 IPR001653 Diaminopimelate epimerase, DapF H5404_23770 IPR018510 Diaminopimelate epimerase, active site H5404_23775 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal H5404_23775 IPR000183 Ornithine/DAP/Arg decarboxylase H5404_23775 IPR029066 PLP-binding barrel H5404_23775 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site H5404_23775 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal H5404_23775 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site H5404_23775 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal H5404_23775 IPR002986 Diaminopimelate decarboxylase, LysA H5404_23785 IPR020895 Frataxin conserved site H5404_23785 IPR036524 Frataxin/CyaY superfamily H5404_23785 IPR002908 Frataxin/CyaY H5404_23790 IPR000274 Adenylate cyclase, class-I H5404_23790 IPR024686 Adenylate cyclase class-I, conserved site H5404_23790 IPR024685 Adenylate cyclase class-I, N-terminal domain H5404_23795 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily H5404_23795 IPR022418 Porphobilinogen deaminase, C-terminal H5404_23795 IPR022417 Porphobilinogen deaminase, N-terminal H5404_23795 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site H5404_23795 IPR000860 Porphobilinogen deaminase H5404_23800 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily H5404_23800 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase H5404_23800 IPR039793 Uroporphyrinogen-III synthase H5404_23805 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX H5404_23810 IPR010817 HemY, N-terminal H5404_23810 IPR005254 Heme biosynthesis-associated TPR protein H5404_23810 IPR011990 Tetratricopeptide-like helical domain superfamily H5404_23850 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain H5404_23850 IPR017938 Riboflavin synthase-like beta-barrel H5404_23850 IPR017927 FAD-binding domain, ferredoxin reductase-type H5404_23850 IPR001433 Oxidoreductase FAD/NAD(P)-binding H5404_23855 IPR036010 2Fe-2S ferredoxin-like superfamily H5404_23855 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain H5404_23855 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria H5404_23855 IPR001055 Adrenodoxin H5404_23855 IPR012675 Beta-grasp domain superfamily H5404_23855 IPR018298 Adrenodoxin, iron-sulphur binding site H5404_23860 IPR002830 UbiD decarboxylyase family H5404_23870 IPR004665 Transcription termination factor Rho H5404_23870 IPR011113 Rho termination factor, RNA-binding domain H5404_23870 IPR036269 Rho termination factor, N-terminal domain superfamily H5404_23870 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_23870 IPR041703 Transcription termination factor Rho, ATP binding domain H5404_23870 IPR003593 AAA+ ATPase domain H5404_23870 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain H5404_23870 IPR011129 Cold shock domain H5404_23870 IPR011112 Rho termination factor, N-terminal H5404_23870 IPR012340 Nucleic acid-binding, OB-fold H5404_23875 IPR005746 Thioredoxin H5404_23875 IPR036249 Thioredoxin-like superfamily H5404_23875 IPR017937 Thioredoxin, conserved site H5404_23875 IPR013766 Thioredoxin domain H5404_23880 IPR014001 Helicase superfamily 1/2, ATP-binding domain H5404_23880 IPR014014 RNA helicase, DEAD-box type, Q motif H5404_23880 IPR023554 ATP-dependent RNA helicase RhlB type H5404_23880 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site H5404_23880 IPR011545 DEAD/DEAH box helicase domain H5404_23880 IPR001650 Helicase, C-terminal H5404_23880 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_23885 IPR030673 Pyrophosphatase, GppA/Ppx-type H5404_23885 IPR003695 Ppx/GppA phosphatase H5404_23885 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase H5404_23890 IPR003744 Queuosine precursor transporter H5404_23900 IPR002121 HRDC domain H5404_23900 IPR010997 HRDC-like superfamily H5404_23900 IPR001650 Helicase, C-terminal H5404_23900 IPR018982 RQC domain H5404_23900 IPR014001 Helicase superfamily 1/2, ATP-binding domain H5404_23900 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial H5404_23900 IPR004589 DNA helicase, ATP-dependent, RecQ type H5404_23900 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_23900 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain H5404_23900 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_23900 IPR011545 DEAD/DEAH box helicase domain H5404_23905 IPR004626 RarD protein H5404_23905 IPR000620 EamA domain H5404_23915 IPR001123 Amino acid exporter protein, LeuE-type H5404_23915 IPR004778 Homoserine/Threonine efflux protein H5404_23920 IPR029055 Nucleophile aminohydrolases, N-terminal H5404_23920 IPR000101 Gamma-glutamyltranspeptidase H5404_23925 IPR005753 DNA helicase, ATP-dependent, UvrD type H5404_23925 IPR000212 DNA helicase, UvrD/REP type H5404_23925 IPR014017 UvrD-like DNA helicase, C-terminal H5404_23925 IPR034739 UvrD/AddA helicase, N-terminal H5404_23925 IPR014016 UvrD-like helicase, ATP-binding domain H5404_23925 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_23925 IPR013986 DExx box DNA helicase domain superfamily H5404_23935 IPR007801 Uncharacterised protein family UPF0276 H5404_23935 IPR036237 Xylose isomerase-like superfamily H5404_23955 IPR020846 Major facilitator superfamily domain H5404_23955 IPR023697 Multidrug resistance protein MdtL H5404_23955 IPR036259 MFS transporter superfamily H5404_23955 IPR011701 Major facilitator superfamily H5404_23960 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_23960 IPR036390 Winged helix DNA-binding domain superfamily H5404_23960 IPR037402 HTH-type transcriptional regulator YidZ, PBP2 domain H5404_23960 IPR023746 Transcription regulator HTH, YidZ H5404_23960 IPR000847 Transcription regulator HTH, LysR H5404_23960 IPR005119 LysR, substrate-binding H5404_23965 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal H5404_23965 IPR036005 Creatinase/aminopeptidase-like H5404_23965 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site H5404_23965 IPR001714 Peptidase M24, methionine aminopeptidase H5404_23965 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal H5404_23965 IPR036005 Creatinase/aminopeptidase-like H5404_23965 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site H5404_23965 IPR000587 Creatinase, N-terminal H5404_23965 IPR000994 Peptidase M24 H5404_23965 IPR001714 Peptidase M24, methionine aminopeptidase H5404_23965 IPR000994 Peptidase M24 H5404_23965 IPR000587 Creatinase, N-terminal H5404_23970 IPR013785 Aldolase-type TIM barrel H5404_23970 IPR007197 Radical SAM H5404_23970 IPR012726 Thiazole biosynthesis ThiH H5404_23970 IPR034428 ThiH/NocL/HydG-like H5404_23970 IPR010722 Biotin and thiamin synthesis-associated domain H5404_23975 IPR008867 Thiazole synthase H5404_23975 IPR013785 Aldolase-type TIM barrel H5404_23975 IPR033983 Thiazole synthase ThiG H5404_23980 IPR003749 Sulfur carrier ThiS/MoaD-like H5404_23980 IPR012675 Beta-grasp domain superfamily H5404_23980 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp H5404_23980 IPR010035 ThiS, thiamine-biosynthesis H5404_23985 IPR000594 THIF-type NAD/FAD binding fold H5404_23985 IPR012731 Thiazole biosynthesis adenylyltransferase ThiF H5404_23985 IPR035985 Ubiquitin-activating enzyme H5404_23990 IPR036206 Thiamin phosphate synthase superfamily H5404_23990 IPR034291 Thiamine phosphate synthase H5404_23990 IPR022998 Thiamine phosphate synthase/TenI H5404_23990 IPR013785 Aldolase-type TIM barrel H5404_23995 IPR038521 ThiC/Bza superfamily H5404_23995 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B H5404_23995 IPR025747 ThiC-associated domain H5404_23995 IPR037509 Phosphomethylpyrimidine synthase H5404_24000 IPR003691 Putative fluoride ion transporter CrcB H5404_24015 IPR038717 Tc1-like transposase, DDE domain H5404_24055 IPR001451 Hexapeptide repeat H5404_24055 IPR011004 Trimeric LpxA-like superfamily H5404_24060 IPR009962 Protein of unknown function DUF1488 H5404_24060 IPR036692 Shew3726-like superfamily H5404_24065 IPR011342 Shikimate dehydrogenase H5404_24065 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal H5404_24065 IPR022893 Shikimate dehydrogenase family H5404_24065 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase H5404_24065 IPR036291 NAD(P)-binding domain superfamily H5404_24065 IPR041121 SDH, C-terminal H5404_24070 IPR018375 Coproporphyrinogen III oxidase, conserved site H5404_24070 IPR001260 Coproporphyrinogen III oxidase, aerobic H5404_24070 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily H5404_24075 IPR023535 Threonylcarbamoyl-AMP synthase H5404_24075 IPR006070 YrdC-like domain H5404_24075 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily H5404_24080 IPR024694 PurE, prokaryotic type H5404_24080 IPR000031 PurE domain H5404_24080 IPR033747 Class I PurE H5404_24080 IPR035893 PurE domain superfamily H5404_24085 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type H5404_24085 IPR011761 ATP-grasp fold H5404_24085 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit H5404_24085 IPR016185 Pre-ATP-grasp domain superfamily H5404_24085 IPR040686 Phosphoribosylaminoimidazole carboxylase, C-terminal domain H5404_24085 IPR013815 ATP-grasp fold, subdomain 1 H5404_24085 IPR011054 Rudiment single hybrid motif H5404_24090 IPR013498 DNA topoisomerase, type IA, zn finger H5404_24090 IPR000380 DNA topoisomerase, type IA H5404_24095 IPR007456 Smg H5404_24100 IPR041614 DprA, winged helix domain H5404_24100 IPR003488 DNA recombination-mediator protein A H5404_24100 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_24110 IPR023635 Peptide deformylase H5404_24110 IPR036821 Peptide deformylase superfamily H5404_24115 IPR005793 Formyl transferase, C-terminal H5404_24115 IPR037022 Formyl transferase, C-terminal domain superfamily H5404_24115 IPR002376 Formyl transferase, N-terminal H5404_24115 IPR036477 Formyl transferase, N-terminal domain superfamily H5404_24115 IPR011034 Formyl transferase-like, C-terminal domain superfamily H5404_24115 IPR001555 Phosphoribosylglycinamide formyltransferase, active site H5404_24115 IPR041711 Methionyl-tRNA formyltransferase, N-terminal domain H5404_24115 IPR005794 Methionyl-tRNA formyltransferase H5404_24120 IPR006027 NusB/RsmB/TIM44 H5404_24120 IPR035926 NusB-like superfamily H5404_24120 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type H5404_24120 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site H5404_24120 IPR004573 rRNA small subunit methyltransferase B H5404_24120 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_24120 IPR023267 RNA (C5-cytosine) methyltransferase H5404_24125 IPR006037 Regulator of K+ conductance, C-terminal H5404_24125 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily H5404_24125 IPR003148 Regulator of K+ conductance, N-terminal H5404_24125 IPR036291 NAD(P)-binding domain superfamily H5404_24125 IPR006036 Potassium uptake protein TrkA H5404_24130 IPR003445 Cation transporter H5404_24130 IPR004772 TrkH potassium transport family H5404_24140 IPR005744 Hly-III H5404_24140 IPR004254 AdipoR/Haemolysin-III-related H5404_24145 IPR014752 Arrestin, C-terminal H5404_24145 IPR009776 Sporulation stage 0, protein M H5404_24145 IPR014756 Immunoglobulin E-set H5404_24155 IPR038134 YihD-like superfamily H5404_24155 IPR009383 Protein of unknown function DUF1040 H5404_24160 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG H5404_24160 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain H5404_24160 IPR013783 Immunoglobulin-like fold H5404_24160 IPR032879 FixG, C-terminal immunoglobulin-like domain H5404_24160 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site H5404_24165 IPR002575 Aminoglycoside phosphotransferase H5404_24165 IPR011009 Protein kinase-like domain superfamily H5404_24165 IPR032882 SrkA/RdoA protein kinase H5404_24170 IPR013766 Thioredoxin domain H5404_24170 IPR036249 Thioredoxin-like superfamily H5404_24170 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL H5404_24170 IPR001853 DSBA-like thioredoxin domain H5404_24175 IPR002123 Phospholipid/glycerol acyltransferase H5404_24215 IPR042095 Sulfatase-modifying factor enzyme superfamily H5404_24215 IPR005532 Sulfatase-modifying factor enzyme H5404_24215 IPR016187 C-type lectin fold H5404_24230 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset H5404_24230 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein H5404_24230 IPR037026 Vgr protein, OB-fold domain superfamily H5404_24230 IPR006531 Gp5 N-terminal H5404_24245 IPR005412 DNA-binding protein Fis H5404_24245 IPR002197 DNA binding HTH domain, Fis-type H5404_24245 IPR009057 Homeobox-like domain superfamily H5404_24250 IPR029035 DHS-like NAD/FAD-binding domain superfamily H5404_24250 IPR039444 SIR2-like domain H5404_24255 IPR011931 Tyrosine recombinase XerC H5404_24255 IPR011010 DNA breaking-rejoining enzyme, catalytic core H5404_24255 IPR010998 Integrase/recombinase, N-terminal H5404_24255 IPR004107 Integrase, SAM-like, N-terminal H5404_24255 IPR023009 Tyrosine recombinase XerC/XerD H5404_24255 IPR013762 Integrase-like, catalytic domain superfamily H5404_24255 IPR002104 Integrase, catalytic domain H5404_24305 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily H5404_24305 IPR006120 Resolvase, HTH domain H5404_24305 IPR006119 Resolvase, N-terminal catalytic domain H5404_24305 IPR009057 Homeobox-like domain superfamily H5404_24305 IPR006118 Recombinase, conserved site H5404_24310 IPR029061 Thiamin diphosphate-binding fold H5404_24310 IPR029035 DHS-like NAD/FAD-binding domain superfamily H5404_24310 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding H5404_24310 IPR000399 TPP-binding enzyme, conserved site H5404_24310 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain H5404_24310 IPR012000 Thiamine pyrophosphate enzyme, central domain H5404_24310 IPR039368 Acetolactate synthase large subunit, TPP binding domain H5404_24310 IPR012846 Acetolactate synthase, large subunit, biosynthetic H5404_24315 IPR002912 ACT domain H5404_24320 IPR036038 Aminotransferase-like, PLP-dependent enzymes H5404_24320 IPR018300 Aminotransferase, class IV, conserved site H5404_24320 IPR001544 Aminotransferase class IV H5404_24320 IPR033939 Branched-chain aminotransferase H5404_24320 IPR005785 Branched-chain amino acid aminotransferase I H5404_24325 IPR037237 IlvD/EDD, N-terminal domain H5404_24325 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site H5404_24325 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase H5404_24325 IPR004404 Dihydroxy-acid dehydratase H5404_24325 IPR042096 Dihydroxy-acid dehydratase, C-terminal H5404_24330 IPR038110 Threonine dehydratase, ACT-like domain superfamily H5404_24330 IPR001721 Threonine dehydratase, ACT-like domain H5404_24330 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site H5404_24330 IPR001926 Pyridoxal-phosphate dependent enzyme H5404_24330 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme H5404_24330 IPR005787 Threonine dehydratase, biosynthetic H5404_24335 IPR036390 Winged helix DNA-binding domain superfamily H5404_24335 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_24335 IPR000847 Transcription regulator HTH, LysR H5404_24335 IPR005119 LysR, substrate-binding H5404_24340 IPR004812 Drug resistance transporter Bcr/CmlA subfamily H5404_24340 IPR011701 Major facilitator superfamily H5404_24340 IPR020846 Major facilitator superfamily domain H5404_24340 IPR036259 MFS transporter superfamily H5404_24345 IPR018313 Solute-binding protein family 3, conserved site H5404_24345 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF H5404_24350 IPR000515 ABC transporter type 1, transmembrane domain MetI-like H5404_24350 IPR035906 MetI-like superfamily H5404_24350 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain H5404_24355 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase H5404_24355 IPR038009 GlmU, C-terminal LbH domain H5404_24355 IPR001451 Hexapeptide repeat H5404_24355 IPR018357 Hexapeptide transferase, conserved site H5404_24355 IPR025877 MobA-like NTP transferase H5404_24355 IPR029044 Nucleotide-diphospho-sugar transferases H5404_24355 IPR011004 Trimeric LpxA-like superfamily H5404_24360 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily H5404_24360 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit H5404_24360 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal H5404_24360 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal H5404_24360 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain H5404_24365 IPR005722 ATP synthase, F1 complex, beta subunit H5404_24365 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_24365 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal H5404_24365 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain H5404_24365 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily H5404_24365 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain H5404_24365 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site H5404_24365 IPR003593 AAA+ ATPase domain H5404_24370 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site H5404_24370 IPR000131 ATP synthase, F1 complex, gamma subunit H5404_24370 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily H5404_24375 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily H5404_24375 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site H5404_24375 IPR005294 ATP synthase, F1 complex, alpha subunit H5404_24375 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily H5404_24375 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily H5404_24375 IPR000793 ATP synthase, alpha subunit, C-terminal H5404_24375 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain H5404_24375 IPR033732 ATP synthase, F1 complex, alpha subunit nucleotide-binding domain H5404_24375 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_24375 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain H5404_24380 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily H5404_24380 IPR000711 ATPase, OSCP/delta subunit H5404_24380 IPR020781 ATPase, OSCP/delta subunit, conserved site H5404_24385 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast H5404_24385 IPR005864 ATP synthase, F0 complex, subunit b, bacterial H5404_24385 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily H5404_24390 IPR002379 V-ATPase proteolipid subunit C-like domain H5404_24390 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site H5404_24390 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast H5404_24390 IPR035921 F/V-ATP synthase subunit C superfamily H5404_24390 IPR000454 ATP synthase, F0 complex, subunit C H5404_24390 IPR038662 F1F0 ATP synthase subunit C superfamily H5404_24395 IPR023011 ATP synthase, F0 complex, subunit A, active site H5404_24395 IPR000568 ATP synthase, F0 complex, subunit A H5404_24395 IPR035908 ATP synthase, F0 complex, subunit A superfamily H5404_24400 IPR005598 ATP synthase protein I H5404_24405 IPR041468 ParB/Spo0J, HTH domain H5404_24405 IPR036086 ParB/Sulfiredoxin superfamily H5404_24405 IPR004437 ParB/RepB/Spo0J partition protein H5404_24405 IPR003115 ParB/Sulfiredoxin H5404_24410 IPR025669 AAA domain H5404_24410 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_24415 IPR003682 rRNA small subunit methyltransferase G H5404_24415 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_24420 IPR026904 GidA associated domain 3 H5404_24420 IPR020595 MnmG-related, conserved site H5404_24420 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related H5404_24420 IPR036188 FAD/NAD(P)-binding domain superfamily H5404_24420 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG H5404_24425 IPR008254 Flavodoxin/nitric oxide synthase H5404_24425 IPR029039 Flavoprotein-like superfamily H5404_24430 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 H5404_24430 IPR005225 Small GTP-binding protein domain H5404_24430 IPR025867 MnmE, helical domain H5404_24430 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_24430 IPR027368 tRNA modification GTPase MnmE domain 2 H5404_24430 IPR004520 tRNA modification GTPase MnmE H5404_24430 IPR006073 GTP binding domain H5404_24430 IPR018948 GTP-binding protein TrmE, N-terminal H5404_24430 IPR031168 TrmE-type guanine nucleotide-binding domain H5404_24435 IPR038221 YidC, periplasmic domain superfamily H5404_24435 IPR038210 Membrane insertase YidC, periplasmic domain H5404_24435 IPR019998 Membrane insertase YidC H5404_24435 IPR028055 Membrane insertase YidC/Oxa1, C-terminal H5404_24435 IPR028053 Membrane insertase YidC, N-terminal H5404_24435 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 H5404_24440 IPR002696 Putative membrane protein insertion efficiency factor H5404_24445 IPR020539 Ribonuclease P, conserved site H5404_24445 IPR000100 Ribonuclease P H5404_24445 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup H5404_24445 IPR020568 Ribosomal protein S5 domain 2-type fold H5404_24450 IPR000271 Ribosomal protein L34 H5404_24450 IPR020939 Ribosomal protein L34, conserved site H5404_24455 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_24455 IPR003439 ABC transporter-like H5404_24455 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type H5404_24455 IPR017871 ABC transporter, conserved site H5404_24455 IPR003593 AAA+ ATPase domain H5404_24460 IPR035906 MetI-like superfamily H5404_24460 IPR000515 ABC transporter type 1, transmembrane domain MetI-like H5404_24460 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain H5404_24465 IPR001320 Ionotropic glutamate receptor H5404_24465 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF H5404_24465 IPR018313 Solute-binding protein family 3, conserved site H5404_24510 IPR001387 Cro/C1-type helix-turn-helix domain H5404_24510 IPR010982 Lambda repressor-like, DNA-binding domain superfamily H5404_24510 IPR013430 Toxin-antitoxin system, antidote protein, HigA H5404_24515 IPR007711 Toxin HigB-1 H5404_24515 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily H5404_24520 IPR020231 Uncharacterised protein family, YfgI H5404_24535 IPR042117 OMPP1/FadL/TodX superfamily H5404_24535 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) H5404_24545 IPR036398 Alpha carbonic anhydrase domain superfamily H5404_24545 IPR001148 Alpha carbonic anhydrase domain H5404_24545 IPR041891 Carbonic anhydrase, prokaryotic-like H5404_24545 IPR023561 Carbonic anhydrase, alpha-class H5404_24545 IPR018338 Carbonic anhydrase, alpha-class, conserved site H5404_24590 IPR020891 Uncharacterised protein family UPF0758, conserved site H5404_24590 IPR001405 Uncharacterised protein family UPF0758 H5404_24590 IPR025657 RadC-like JAB domain H5404_24590 IPR010994 RuvA domain 2-like H5404_24590 IPR037518 MPN domain H5404_24690 IPR007358 Nucleoid-associated protein NdpA H5404_24705 IPR002197 DNA binding HTH domain, Fis-type H5404_24705 IPR009057 Homeobox-like domain superfamily H5404_24705 IPR005412 DNA-binding protein Fis H5404_24715 IPR009057 Homeobox-like domain superfamily H5404_24715 IPR006120 Resolvase, HTH domain H5404_24715 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily H5404_24715 IPR006118 Recombinase, conserved site H5404_24715 IPR006119 Resolvase, N-terminal catalytic domain H5404_24725 IPR006119 Resolvase, N-terminal catalytic domain H5404_24725 IPR006120 Resolvase, HTH domain H5404_24725 IPR006118 Recombinase, conserved site H5404_24725 IPR009057 Homeobox-like domain superfamily H5404_24725 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily H5404_24745 IPR032874 DDE domain H5404_24745 IPR001584 Integrase, catalytic core H5404_24745 IPR036397 Ribonuclease H superfamily H5404_24745 IPR012337 Ribonuclease H-like superfamily H5404_24755 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily H5404_24755 IPR009614 Toxin YoeB H5404_24760 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM H5404_24760 IPR036165 YefM-like superfamily H5404_24775 IPR036737 OmpA-like domain superfamily H5404_24775 IPR000498 Outer membrane protein OmpA-like, transmembrane domain H5404_24775 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel H5404_24775 IPR002368 Outer membrane protein, OmpA H5404_24775 IPR006664 Outer membrane protein, bacterial H5404_24775 IPR006690 Outer membrane protein, OmpA-like, conserved site H5404_24775 IPR006665 OmpA-like domain H5404_24780 IPR003343 Bacterial Ig-like, group 2 H5404_24780 IPR021884 Ice-binding protein-like H5404_24780 IPR008964 Invasin/intimin cell-adhesion fragments H5404_24785 IPR006120 Resolvase, HTH domain H5404_24785 IPR006118 Recombinase, conserved site H5404_24785 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily H5404_24785 IPR006119 Resolvase, N-terminal catalytic domain H5404_24795 IPR002295 N6 adenine-specific DNA methyltransferase, D21 class H5404_24795 IPR002941 DNA methylase N-4/N-6 H5404_24795 IPR001091 Restriction/modification DNA-methylase H5404_24795 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase H5404_24795 IPR002052 DNA methylase, N-6 adenine-specific, conserved site H5404_24815 IPR006118 Recombinase, conserved site H5404_24815 IPR006119 Resolvase, N-terminal catalytic domain H5404_24815 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily H5404_24815 IPR006120 Resolvase, HTH domain H5404_24840 IPR025296 Domain of unknown function DUF4158 H5404_24840 IPR002513 Tn3 transposase DDE domain H5404_24845 IPR006118 Recombinase, conserved site H5404_24845 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily H5404_24845 IPR006120 Resolvase, HTH domain H5404_24845 IPR006119 Resolvase, N-terminal catalytic domain H5404_24845 IPR009057 Homeobox-like domain superfamily H5404_24855 IPR006120 Resolvase, HTH domain H5404_24855 IPR006119 Resolvase, N-terminal catalytic domain H5404_24855 IPR006118 Recombinase, conserved site H5404_24855 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily H5404_24860 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily H5404_24860 IPR001801 Histone-like protein H-NS H5404_24860 IPR027454 Histone-like protein H-NS, N-terminal H5404_24860 IPR027444 Histone-like protein H-NS, C-terminal domain H5404_24865 IPR016128 Pyosin/cloacin translocation domain H5404_24865 IPR003615 HNH nuclease H5404_24865 IPR024575 Cloacin colicin family H5404_24865 IPR037146 Colicin/pyocin, DNase domain superfamily H5404_24865 IPR036302 Pyosin/cloacin translocation domain superfamily H5404_24865 IPR024566 Colicin, receptor domain H5404_24870 IPR035900 Colicin E immunity protein superfamily H5404_24870 IPR000290 Colicin immunity protein/pyocin immunity protein H5404_24895 IPR000021 Hok/gef cell toxic protein H5404_24895 IPR018084 Hok/gef cell toxic protein, conserved site H5404_24925 IPR003601 DNA topoisomerase, type IA, domain 2 H5404_24925 IPR023406 DNA topoisomerase, type IA, active site H5404_24925 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 H5404_24925 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 H5404_24925 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 H5404_24925 IPR023405 DNA topoisomerase, type IA, core domain H5404_24925 IPR003602 DNA topoisomerase, type IA, DNA-binding domain H5404_24925 IPR000380 DNA topoisomerase, type IA H5404_24925 IPR005738 DNA topoisomerase III H5404_24925 IPR006171 TOPRIM domain H5404_24925 IPR034144 DNA topoisomerase 3-like, TOPRIM domain H5404_24925 IPR013497 DNA topoisomerase, type IA, central H5404_24955 IPR024402 Domain of unknown function DUF2726 H5404_25025 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_25025 IPR001482 Type II/IV secretion system protein H5404_25065 IPR020816 Histone-like DNA-binding protein, conserved site H5404_25065 IPR000119 Histone-like DNA-binding protein H5404_25065 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily H5404_25230 IPR001907 ATP-dependent Clp protease proteolytic subunit H5404_25230 IPR029045 ClpP/crotonase-like domain superfamily H5404_25230 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA H5404_25230 IPR033135 ClpP, histidine active site H5404_25235 IPR006944 Bacteriophage/Gene transfer agent portal protein H5404_25240 IPR036390 Winged helix DNA-binding domain superfamily H5404_25240 IPR036388 Winged helix-like DNA-binding domain superfamily H5404_25240 IPR005021 Terminase large subunit, Lambdalikevirus-type H5404_25365 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_25365 IPR025669 AAA domain H5404_25425 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_25425 IPR025669 AAA domain H5404_25445 IPR002513 Tn3 transposase DDE domain H5404_25445 IPR025296 Domain of unknown function DUF4158 H5404_25450 IPR006119 Resolvase, N-terminal catalytic domain H5404_25450 IPR006120 Resolvase, HTH domain H5404_25450 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily H5404_25450 IPR009057 Homeobox-like domain superfamily H5404_25450 IPR006118 Recombinase, conserved site H5404_25495 IPR036737 OmpA-like domain superfamily H5404_25495 IPR006665 OmpA-like domain H5404_25495 IPR006690 Outer membrane protein, OmpA-like, conserved site H5404_25535 IPR036515 Transposase IS200-like superfamily H5404_25535 IPR002686 Transposase IS200-like H5404_25550 IPR014737 Transposase, Tn5-like, C-terminal H5404_25550 IPR014736 Transposase, Tn5-like, core H5404_25550 IPR014735 Transposase, Tn5-like, N-terminal H5404_25550 IPR003201 Transposase Tn5, dimerisation H5404_25550 IPR002559 Transposase, IS4-like H5404_25550 IPR038215 Transposase, Tn5-like, N-terminal domain superfamily H5404_25550 IPR012337 Ribonuclease H-like superfamily H5404_25575 IPR006120 Resolvase, HTH domain H5404_25575 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily H5404_25575 IPR006119 Resolvase, N-terminal catalytic domain H5404_25575 IPR006118 Recombinase, conserved site H5404_25605 IPR034154 Archaeal primase DnaG/twinkle, TOPRIM domain H5404_25605 IPR041459 Polyvalent protein, metallopeptidase domain H5404_25605 IPR006171 TOPRIM domain H5404_25605 IPR013610 Domain of unknown function DUF1738 H5404_25615 IPR004914 Antirestriction protein H5404_25615 IPR042297 Antirestriction domain superfamily H5404_25635 IPR023405 DNA topoisomerase, type IA, core domain H5404_25635 IPR034144 DNA topoisomerase 3-like, TOPRIM domain H5404_25635 IPR003602 DNA topoisomerase, type IA, DNA-binding domain H5404_25635 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 H5404_25635 IPR013497 DNA topoisomerase, type IA, central H5404_25635 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 H5404_25635 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 H5404_25635 IPR000380 DNA topoisomerase, type IA H5404_25635 IPR003601 DNA topoisomerase, type IA, domain 2 H5404_25635 IPR023406 DNA topoisomerase, type IA, active site H5404_25635 IPR006171 TOPRIM domain H5404_25635 IPR005738 DNA topoisomerase III H5404_25685 IPR008258 Transglycosylase SLT domain 1 H5404_25685 IPR023346 Lysozyme-like domain superfamily H5404_25710 IPR000021 Hok/gef cell toxic protein H5404_25710 IPR018084 Hok/gef cell toxic protein, conserved site H5404_25750 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_25750 IPR001482 Type II/IV secretion system protein H5404_25775 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI H5404_25775 IPR042217 Type IV secretion system, VirB10/TrbI H5404_25785 IPR014142 P-type conjugative transfer protein TrbG H5404_25785 IPR038161 VirB9/CagX/TrbG, C-terminal domain superfamily H5404_25785 IPR033645 VirB9/CagX/TrbG, C-terminal H5404_25785 IPR010258 Conjugal transfer, TrbG/VirB9/CagX H5404_25805 IPR001482 Type II/IV secretion system protein H5404_25805 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_25805 IPR014149 Conjugative transfer, TrbB H5404_25815 IPR027417 P-loop containing nucleoside triphosphate hydrolase H5404_25815 IPR018145 CagE, TrbE, VirB component of type IV transporter system, central domain H5404_25815 IPR004346 CagE, TrbE, VirB component of type IV transporter system H5404_25815 IPR003593 AAA+ ATPase domain H5404_25820 IPR016704 Conjugal transfer, TrbD H5404_25820 IPR007792 Type IV secretion system, VirB3 / TrbD / AvhB H5404_25825 IPR007039 Conjugal transfer TrbC/type IV secretion VirB2 H5404_25840 IPR010982 Lambda repressor-like, DNA-binding domain superfamily H5404_25840 IPR016759 HTH-type transcriptional repressor RghR H5404_25840 IPR001387 Cro/C1-type helix-turn-helix domain