VPUCM_0001 PF00258 Flavodoxin VPUCM_0002 PF01926 50S ribosome-binding GTPase VPUCM_0002 PF10396 GTP-binding protein TrmE N-terminus VPUCM_0002 PF12631 Catalytic cysteine-containing C-terminus of GTPase, MnmE VPUCM_0003 PF02096 60Kd inner membrane protein VPUCM_0003 PF14849 YidC periplasmic domain VPUCM_0004 PF00825 Ribonuclease P VPUCM_0005 PF00468 Ribosomal protein L34 VPUCM_0006 PF00005 ABC transporter VPUCM_0007 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_0008 PF00497 Bacterial extracellular solute-binding proteins, family 3 VPUCM_0009 PF00308 Bacterial dnaA protein VPUCM_0009 PF08299 Bacterial dnaA protein helix-turn-helix VPUCM_0009 PF11638 DnaA N-terminal domain VPUCM_0010 PF00712 DNA polymerase III beta subunit, N-terminal domain VPUCM_0010 PF02767 DNA polymerase III beta subunit, central domain VPUCM_0010 PF02768 DNA polymerase III beta subunit, C-terminal domain VPUCM_0011 PF02463 RecF/RecN/SMC N terminal domain VPUCM_0012 PF00204 DNA gyrase B VPUCM_0012 PF00986 DNA gyrase B subunit, carboxyl terminus VPUCM_0012 PF01751 Toprim domain VPUCM_0012 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_0014 PF01272 Transcription elongation factor, GreA/GreB, C-term VPUCM_0016 PF00011 Hsp20/alpha crystallin family VPUCM_0017 PF00155 Aminotransferase class I and II VPUCM_0018 PF00128 Alpha amylase, catalytic domain VPUCM_0019 PF02092 VPUCM_0019 VPUCM_0019 PF05746 DALR anticodon binding domain VPUCM_0020 PF02091 Glycyl-tRNA synthetase alpha subunit VPUCM_0022 PF01169 VPUCM_0022 VPUCM_0024 PF01206 Sulfurtransferase TusA VPUCM_0026 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_0026 PF03466 LysR substrate binding domain VPUCM_0027 PF00107 Zinc-binding dehydrogenase VPUCM_0027 PF08240 Alcohol dehydrogenase GroES-like domain VPUCM_0028 PF00108 Thiolase, N-terminal domain VPUCM_0028 PF02803 Thiolase, C-terminal domain VPUCM_0029 PF00378 Enoyl-CoA hydratase/isomerase family VPUCM_0029 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VPUCM_0029 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VPUCM_0030 PF01205 Uncharacterized protein family UPF0029 VPUCM_0030 PF09186 Domain of unknown function (DUF1949) VPUCM_0031 PF02386 Cation transport protein VPUCM_0032 PF12724 Flavodoxin domain VPUCM_0034 PF03466 LysR substrate binding domain VPUCM_0036 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain VPUCM_0036 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain VPUCM_0037 PF04380 VPUCM_0037 VPUCM_0038 PF00873 AcrB/AcrD/AcrF family VPUCM_0039 PF16576 VPUCM_0039 VPUCM_0040 PF00440 Bacterial regulatory proteins, tetR family VPUCM_0040 PF16295 VPUCM_0040 VPUCM_0041 PF00580 UvrD/REP helicase N-terminal domain VPUCM_0041 PF13361 UvrD-like helicase C-terminal domain VPUCM_0042 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VPUCM_0044 PF13419 Haloacid dehalogenase-like hydrolase VPUCM_0045 PF00005 ABC transporter VPUCM_0045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VPUCM_0046 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VPUCM_0047 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_0048 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_0048 PF12911 VPUCM_0048 VPUCM_0049 PF05036 Sporulation related domain VPUCM_0052 PF07638 ECF sigma factor VPUCM_0054 PF00069 Protein kinase domain VPUCM_0055 PF00356 Bacterial regulatory proteins, lacI family VPUCM_0055 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VPUCM_0056 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_0056 PF03466 LysR substrate binding domain VPUCM_0057 PF00893 Small Multidrug Resistance protein VPUCM_0058 PF00893 Small Multidrug Resistance protein VPUCM_0059 PF00920 Dehydratase family VPUCM_0060 PF01202 Shikimate kinase VPUCM_0061 PF02447 VPUCM_0061 VPUCM_0062 PF01081 KDPG and KHG aldolase VPUCM_0063 PF01048 Phosphorylase superfamily VPUCM_0064 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_0064 PF03466 LysR substrate binding domain VPUCM_0065 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VPUCM_0065 PF07992 Pyridine nucleotide-disulphide oxidoreductase VPUCM_0066 PF04378 Ribosomal RNA small subunit methyltransferase D, RsmJ VPUCM_0067 PF01432 Peptidase family M3 VPUCM_0068 PF01037 AsnC family VPUCM_0068 PF13404 AsnC-type helix-turn-helix domain VPUCM_0069 PF04445 Putative SAM-dependent methyltransferase VPUCM_0071 PF00892 EamA-like transporter family VPUCM_0072 PF00582 Universal stress protein family VPUCM_0073 PF00210 Ferritin-like domain VPUCM_0074 PF10625 VPUCM_0074 VPUCM_0075 PF03486 HI0933-like protein VPUCM_0076 PF00158 Sigma-54 interaction domain VPUCM_0076 PF02954 Bacterial regulatory protein, Fis family VPUCM_0077 PF04972 BON domain VPUCM_0078 PF07043 VPUCM_0078 VPUCM_0080 PF01814 Hemerythrin HHE cation binding domain VPUCM_0081 PF00781 Diacylglycerol kinase catalytic domain VPUCM_0081 PF00782 Dual specificity phosphatase, catalytic domain VPUCM_0083 PF09537 Domain of unknown function (DUF2383) VPUCM_0085 PF07332 VPUCM_0085 VPUCM_0087 PF01594 VPUCM_0087 VPUCM_0088 PF00563 EAL domain VPUCM_0088 PF00990 GGDEF domain VPUCM_0088 PF08448 PAS fold VPUCM_0088 PF13426 PAS domain VPUCM_0089 PF00892 EamA-like transporter family VPUCM_0090 PF02646 VPUCM_0090 VPUCM_0091 PF01209 ubiE/COQ5 methyltransferase family VPUCM_0092 PF02036 SCP-2 sterol transfer family VPUCM_0093 PF03109 VPUCM_0093 VPUCM_0094 PF02416 mttA/Hcf106 family VPUCM_0095 PF02416 mttA/Hcf106 family VPUCM_0096 PF00902 Sec-independent protein translocase protein (TatC) VPUCM_0098 PF01026 TatD related DNase VPUCM_0099 PF00490 Delta-aminolevulinic acid dehydratase VPUCM_0100 PF00583 Acetyltransferase (GNAT) family VPUCM_0101 PF00476 DNA polymerase family A VPUCM_0101 PF01367 5'-3' exonuclease, C-terminal SAM fold VPUCM_0101 PF01612 3'-5' exonuclease VPUCM_0101 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VPUCM_0102 PF01926 50S ribosome-binding GTPase VPUCM_0103 PF00034 Cytochrome c VPUCM_0106 PF13489 Methyltransferase domain VPUCM_0107 PF04220 VPUCM_0107 VPUCM_0108 PF10675 VPUCM_0108 VPUCM_0109 PF04055 Radical SAM superfamily VPUCM_0109 PF06969 HemN C-terminal domain VPUCM_0110 PF00962 Adenosine/AMP deaminase VPUCM_0111 PF00563 EAL domain VPUCM_0111 PF00672 HAMP domain VPUCM_0111 PF00990 GGDEF domain VPUCM_0111 PF02743 Cache domain VPUCM_0112 PF00072 Response regulator receiver domain VPUCM_0112 PF00158 Sigma-54 interaction domain VPUCM_0112 PF02954 Bacterial regulatory protein, Fis family VPUCM_0113 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_0113 PF00989 PAS fold VPUCM_0113 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_0114 PF13511 VPUCM_0114 VPUCM_0115 PF00120 Glutamine synthetase, catalytic domain VPUCM_0115 PF03951 Glutamine synthetase, beta-Grasp domain VPUCM_0117 PF00009 Elongation factor Tu GTP binding domain VPUCM_0117 PF00679 Elongation factor G C-terminus VPUCM_0117 PF03144 Elongation factor Tu domain 2 VPUCM_0118 PF13521 AAA domain VPUCM_0119 PF11172 VPUCM_0119 VPUCM_0120 PF03631 VPUCM_0120 VPUCM_0121 PF02580 D-Tyr-tRNA(Tyr) deacylase VPUCM_0122 PF00583 Acetyltransferase (GNAT) family VPUCM_0122 PF09500 Putative thioesterase (yiiD_Cterm) VPUCM_0123 PF05170 VPUCM_0123 VPUCM_0124 PF01293 Phosphoenolpyruvate carboxykinase VPUCM_0125 PF01430 Hsp33 protein VPUCM_0127 PF11356 Type IV pilus biogenesis VPUCM_0128 PF00263 VPUCM_0128 VPUCM_0128 PF03958 Bacterial type II/III secretion system short domain VPUCM_0129 PF00437 Type II/IV secretion system protein VPUCM_0130 PF00482 Type II secretion system (T2SS), protein F VPUCM_0131 PF07963 Prokaryotic N-terminal methylation motif VPUCM_0131 PF08334 Type II secretion system (T2SS), protein G VPUCM_0132 PF07963 Prokaryotic N-terminal methylation motif VPUCM_0132 PF12019 Type II transport protein GspH VPUCM_0133 PF02501 Type II secretion system (T2SS), protein I VPUCM_0133 PF07963 Prokaryotic N-terminal methylation motif VPUCM_0134 PF07963 Prokaryotic N-terminal methylation motif VPUCM_0134 PF11612 Type II secretion system (T2SS), protein J VPUCM_0135 PF03934 Type II secretion system (T2SS), protein K VPUCM_0136 PF05134 Type II secretion system (T2SS), protein L VPUCM_0136 PF12693 GspL periplasmic domain VPUCM_0137 PF04612 Type II secretion system (T2SS), protein M VPUCM_0138 PF01203 VPUCM_0138 VPUCM_0139 PF00459 Inositol monophosphatase family VPUCM_0140 PF00293 NUDIX domain VPUCM_0141 PF01106 NifU-like domain VPUCM_0141 PF01521 Iron-sulphur cluster biosynthesis VPUCM_0142 PF00156 Phosphoribosyl transferase domain VPUCM_0143 PF00561 alpha/beta hydrolase fold VPUCM_0145 PF00575 S1 RNA binding domain VPUCM_0145 PF09371 Tex-like protein N-terminal domain VPUCM_0145 PF12836 Helix-hairpin-helix motif VPUCM_0145 PF16921 VPUCM_0145 VPUCM_0146 PF05618 Putative ATP-dependant zinc protease VPUCM_0147 PF01272 Transcription elongation factor, GreA/GreB, C-term VPUCM_0147 PF03449 Transcription elongation factor, N-terminal VPUCM_0148 PF06476 VPUCM_0148 VPUCM_0149 PF00072 Response regulator receiver domain VPUCM_0149 PF00486 Transcriptional regulatory protein, C terminal VPUCM_0150 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_0150 PF00672 HAMP domain VPUCM_0150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_0151 PF00860 Permease family VPUCM_0153 PF00270 DEAD/DEAH box helicase VPUCM_0153 PF00271 Helicase conserved C-terminal domain VPUCM_0153 PF17191 VPUCM_0153 VPUCM_0154 PF00588 SpoU rRNA Methylase family VPUCM_0154 PF12105 SpoU, rRNA methylase, C-terminal VPUCM_0155 PF02824 TGS domain VPUCM_0155 PF04607 Region found in RelA / SpoT proteins VPUCM_0155 PF13291 ACT domain VPUCM_0155 PF13328 HD domain VPUCM_0156 PF01192 RNA polymerase Rpb6 VPUCM_0157 PF00625 Guanylate kinase VPUCM_0158 PF13181 Tetratricopeptide repeat VPUCM_0159 PF03544 Gram-negative bacterial TonB protein C-terminal VPUCM_0160 PF02472 Biopolymer transport protein ExbD/TolR VPUCM_0161 PF01618 VPUCM_0161 VPUCM_0162 PF01618 VPUCM_0162 VPUCM_0163 PF11932 VPUCM_0163 VPUCM_0164 PF00593 TonB dependent receptor VPUCM_0164 PF07715 TonB-dependent Receptor Plug Domain VPUCM_0165 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_0166 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_0167 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VPUCM_0168 PF00005 ABC transporter VPUCM_0168 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VPUCM_0169 PF00005 ABC transporter VPUCM_0170 PF06146 VPUCM_0170 VPUCM_0174 PF05930 Prophage CP4-57 regulatory protein (AlpA) VPUCM_0176 PF00669 Bacterial flagellin N-terminal helical region VPUCM_0176 PF00700 Bacterial flagellin C-terminal helical region VPUCM_0177 PF00589 Phage integrase family VPUCM_0177 PF13356 Domain of unknown function (DUF4102) VPUCM_0178 PF03755 VPUCM_0178 VPUCM_0178 PF08340 VPUCM_0178 VPUCM_0179 PF01138 3' exoribonuclease family, domain 1 VPUCM_0179 PF03725 3' exoribonuclease family, domain 2 VPUCM_0180 PF00156 Phosphoribosyl transferase domain VPUCM_0181 PF03279 VPUCM_0181 VPUCM_0182 PF00440 Bacterial regulatory proteins, tetR family VPUCM_0183 PF02441 Flavoprotein VPUCM_0183 PF04127 DNA / pantothenate metabolism flavoprotein VPUCM_0184 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VPUCM_0184 PF00672 HAMP domain VPUCM_0184 PF17200 VPUCM_0184 VPUCM_0185 PF04002 RadC-like JAB domain VPUCM_0186 PF00830 Ribosomal L28 family VPUCM_0187 PF00471 Ribosomal protein L33 VPUCM_0189 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain VPUCM_0189 PF06827 Zinc finger found in FPG and IleRS VPUCM_0189 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain VPUCM_0190 PF00884 Sulfatase VPUCM_0191 PF01467 Cytidylyltransferase VPUCM_0192 PF00534 Glycosyl transferases group 1 VPUCM_0193 PF00535 Glycosyl transferase family 2 VPUCM_0194 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VPUCM_0195 PF01219 Prokaryotic diacylglycerol kinase VPUCM_0196 PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family VPUCM_0197 PF00884 Sulfatase VPUCM_0197 PF11893 VPUCM_0197 VPUCM_0198 PF00132 Bacterial transferase hexapeptide (six repeats) VPUCM_0199 PF01755 VPUCM_0199 VPUCM_0200 PF02719 Polysaccharide biosynthesis protein VPUCM_0201 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family VPUCM_0202 PF02350 UDP-N-acetylglucosamine 2-epimerase VPUCM_0203 PF03102 NeuB family VPUCM_0204 PF00132 Bacterial transferase hexapeptide (six repeats) VPUCM_0205 PF00483 Nucleotidyl transferase VPUCM_0205 PF00571 CBS domain VPUCM_0206 PF02348 Cytidylyltransferase VPUCM_0208 PF00534 Glycosyl transferases group 1 VPUCM_0208 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) VPUCM_0209 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VPUCM_0210 PF03279 VPUCM_0210 VPUCM_0211 PF01370 NAD dependent epimerase/dehydratase family VPUCM_0212 PF06082 VPUCM_0212 VPUCM_0213 PF06251 Capsule biosynthesis GfcC VPUCM_0214 PF11102 Group 4 capsule polysaccharide formation lipoprotein gfcB VPUCM_0216 PF00953 Glycosyl transferase family 4 VPUCM_0217 PF00009 Elongation factor Tu GTP binding domain VPUCM_0217 PF03143 Elongation factor Tu C-terminal domain VPUCM_0219 PF01583 Adenylylsulphate kinase VPUCM_0220 PF01507 Phosphoadenosine phosphosulfate reductase family VPUCM_0222 PF07963 Prokaryotic N-terminal methylation motif VPUCM_0222 PF08334 Type II secretion system (T2SS), protein G VPUCM_0223 PF00437 Type II/IV secretion system protein VPUCM_0223 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VPUCM_0224 PF00482 Type II secretion system (T2SS), protein F VPUCM_0227 PF07963 Prokaryotic N-terminal methylation motif VPUCM_0228 PF03934 Type II secretion system (T2SS), protein K VPUCM_0232 PF00263 VPUCM_0232 VPUCM_0232 PF03958 Bacterial type II/III secretion system short domain VPUCM_0233 PF13462 Thioredoxin VPUCM_0234 PF00953 Glycosyl transferase family 4 VPUCM_0236 PF02563 Polysaccharide biosynthesis/export protein VPUCM_0236 PF10531 SLBB domain VPUCM_0237 PF01061 VPUCM_0237 VPUCM_0238 PF00005 ABC transporter VPUCM_0240 PF00483 Nucleotidyl transferase VPUCM_0241 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase VPUCM_0242 PF04321 RmlD substrate binding domain VPUCM_0243 PF16363 VPUCM_0243 VPUCM_0244 PF13692 Glycosyl transferases group 1 VPUCM_0245 PF05159 VPUCM_0245 VPUCM_0247 PF03567 Sulfotransferase family VPUCM_0248 PF00793 DAHP synthetase I family VPUCM_0249 PF02348 Cytidylyltransferase VPUCM_0250 PF01380 SIS domain VPUCM_0251 PF00534 Glycosyl transferases group 1 VPUCM_0251 PF00535 Glycosyl transferase family 2 VPUCM_0251 PF13641 Glycosyltransferase like family 2 VPUCM_0251 PF16994 VPUCM_0251 VPUCM_0252 PF00685 Sulfotransferase domain VPUCM_0255 PF13632 Glycosyl transferase family group 2 VPUCM_0256 PF00535 Glycosyl transferase family 2 VPUCM_0257 PF02080 TrkA-C domain VPUCM_0257 PF03600 Citrate transporter VPUCM_0259 PF00535 Glycosyl transferase family 2 VPUCM_0260 PF00534 Glycosyl transferases group 1 VPUCM_0260 PF13439 Glycosyltransferase Family 4 VPUCM_0261 PF00535 Glycosyl transferase family 2 VPUCM_0262 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VPUCM_0262 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain VPUCM_0262 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VPUCM_0263 PF00483 Nucleotidyl transferase VPUCM_0264 PF00121 Triosephosphate isomerase VPUCM_0265 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase VPUCM_0266 PF05656 VPUCM_0266 VPUCM_0267 PF11333 VPUCM_0267 VPUCM_0268 PF03551 Transcriptional regulator PadR-like family VPUCM_0269 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded VPUCM_0272 PF06005 Protein of unknown function (DUF904) VPUCM_0273 PF03737 Demethylmenaquinone methyltransferase VPUCM_0274 PF01040 UbiA prenyltransferase family VPUCM_0275 PF00004 ATPase family associated with various cellular activities (AAA) VPUCM_0275 PF07724 AAA domain (Cdc48 subfamily) VPUCM_0275 PF10431 C-terminal, D2-small domain, of ClpB protein VPUCM_0276 PF00227 Proteasome subunit VPUCM_0277 PF05036 Sporulation related domain VPUCM_0278 PF00356 Bacterial regulatory proteins, lacI family VPUCM_0278 PF13377 Periplasmic binding protein-like domain VPUCM_0279 PF00270 DEAD/DEAH box helicase VPUCM_0279 PF00271 Helicase conserved C-terminal domain VPUCM_0280 PF01197 Ribosomal protein L31 VPUCM_0281 PF00338 Ribosomal protein S10p/S20e VPUCM_0282 PF00297 Ribosomal protein L3 VPUCM_0283 PF00573 Ribosomal protein L4/L1 family VPUCM_0284 PF00276 Ribosomal protein L23 VPUCM_0285 PF00181 Ribosomal Proteins L2, RNA binding domain VPUCM_0285 PF03947 Ribosomal Proteins L2, C-terminal domain VPUCM_0286 PF00203 Ribosomal protein S19 VPUCM_0287 PF00237 Ribosomal protein L22p/L17e VPUCM_0288 PF00189 Ribosomal protein S3, C-terminal domain VPUCM_0288 PF07650 KH domain VPUCM_0289 PF00252 Ribosomal protein L16p/L10e VPUCM_0290 PF00831 Ribosomal L29 protein VPUCM_0291 PF00366 Ribosomal protein S17 VPUCM_0292 PF00238 Ribosomal protein L14p/L23e VPUCM_0293 PF00467 KOW motif VPUCM_0293 PF17136 VPUCM_0293 VPUCM_0294 PF00281 Ribosomal protein L5 VPUCM_0294 PF00673 ribosomal L5P family C-terminus VPUCM_0295 PF00253 Ribosomal protein S14p/S29e VPUCM_0296 PF00410 Ribosomal protein S8 VPUCM_0297 PF00347 Ribosomal protein L6 VPUCM_0298 PF00861 Ribosomal L18p/L5e family VPUCM_0299 PF00333 Ribosomal protein S5, N-terminal domain VPUCM_0299 PF03719 Ribosomal protein S5, C-terminal domain VPUCM_0300 PF00327 Ribosomal protein L30p/L7e VPUCM_0301 PF00828 Ribosomal protein L18e/L15 VPUCM_0302 PF00344 SecY translocase VPUCM_0303 PF00444 Ribosomal protein L36 VPUCM_0304 PF00416 Ribosomal protein S13/S18 VPUCM_0305 PF00411 Ribosomal protein S11 VPUCM_0306 PF00163 Ribosomal protein S4/S9 N-terminal domain VPUCM_0306 PF01479 S4 domain VPUCM_0307 PF01000 RNA polymerase Rpb3/RpoA insert domain VPUCM_0307 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain VPUCM_0307 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain VPUCM_0308 PF01196 Ribosomal protein L17 VPUCM_0309 PF11075 VPUCM_0309 VPUCM_0310 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VPUCM_0310 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VPUCM_0312 PF04225 Opacity-associated protein A LysM-like domain VPUCM_0312 PF08525 VPUCM_0312 VPUCM_0313 PF13673 Acetyltransferase (GNAT) domain VPUCM_0314 PF00270 DEAD/DEAH box helicase VPUCM_0314 PF00271 Helicase conserved C-terminal domain VPUCM_0314 PF03880 DbpA RNA binding domain VPUCM_0315 PF00027 Cyclic nucleotide-binding domain VPUCM_0316 PF00149 Calcineurin-like phosphoesterase VPUCM_0316 PF02872 5'-nucleotidase, C-terminal domain VPUCM_0317 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VPUCM_0318 PF01507 Phosphoadenosine phosphosulfate reductase family VPUCM_0319 PF00009 Elongation factor Tu GTP binding domain VPUCM_0320 PF02080 TrkA-C domain VPUCM_0320 PF03600 Citrate transporter VPUCM_0321 PF01583 Adenylylsulphate kinase VPUCM_0322 PF10987 VPUCM_0322 VPUCM_0323 PF11736 Protein of unknown function (DUF3299) VPUCM_0324 PF02687 VPUCM_0324 VPUCM_0324 PF12704 MacB-like periplasmic core domain VPUCM_0325 PF00005 ABC transporter VPUCM_0326 PF10986 VPUCM_0326 VPUCM_0328 PF09695 VPUCM_0328 VPUCM_0329 PF06526 Protein of unknown function (DUF1107) VPUCM_0330 PF01625 Peptide methionine sulfoxide reductase VPUCM_0331 PF01103 Surface antigen VPUCM_0331 PF07244 Surface antigen variable number repeat VPUCM_0331 PF17243 VPUCM_0331 VPUCM_0332 PF04357 VPUCM_0332 VPUCM_0333 PF06094 AIG2-like family VPUCM_0334 PF10973 VPUCM_0334 VPUCM_0335 PF00719 Inorganic pyrophosphatase VPUCM_0336 PF00316 Fructose-1-6-bisphosphatase VPUCM_0337 PF01225 Mur ligase family, catalytic domain VPUCM_0337 PF02875 Mur ligase family, glutamate ligase domain VPUCM_0337 PF08245 Mur ligase middle domain VPUCM_0338 PF02441 Flavoprotein VPUCM_0339 PF13343 Bacterial extracellular solute-binding protein VPUCM_0340 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_0341 PF00005 ABC transporter VPUCM_0342 PF00582 Universal stress protein family VPUCM_0343 PF06808 VPUCM_0343 VPUCM_0343 PF11874 VPUCM_0343 VPUCM_0345 PF16868 VPUCM_0345 VPUCM_0346 PF01316 Arginine repressor, DNA binding domain VPUCM_0346 PF02863 Arginine repressor, C-terminal domain VPUCM_0347 PF00056 lactate/malate dehydrogenase, NAD binding domain VPUCM_0347 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain VPUCM_0349 PF00348 Polyprenyl synthetase VPUCM_0350 PF00829 Ribosomal prokaryotic L21 protein VPUCM_0351 PF01016 Ribosomal L27 protein VPUCM_0352 PF01018 GTP1/OBG VPUCM_0352 PF01926 50S ribosome-binding GTPase VPUCM_0353 PF06738 VPUCM_0353 VPUCM_0354 PF12821 VPUCM_0354 VPUCM_0355 PF00186 Dihydrofolate reductase VPUCM_0356 PF00149 Calcineurin-like phosphoesterase VPUCM_0357 PF04379 Protein of unknown function (DUF525) VPUCM_0358 PF00398 Ribosomal RNA adenine dimethylase VPUCM_0359 PF04166 Pyridoxal phosphate biosynthetic protein PdxA VPUCM_0360 PF09312 SurA N-terminal domain VPUCM_0360 PF13616 PPIC-type PPIASE domain VPUCM_0361 PF03968 OstA-like protein VPUCM_0361 PF04453 Organic solvent tolerance protein VPUCM_0362 PF00226 DnaJ domain VPUCM_0362 PF05099 Tellurite resistance protein TerB VPUCM_0363 PF04784 VPUCM_0363 VPUCM_0364 PF00694 Aconitase C-terminal domain VPUCM_0365 PF00330 Aconitase family (aconitate hydratase) VPUCM_0366 PF00180 Isocitrate/isopropylmalate dehydrogenase VPUCM_0367 PF00682 HMGL-like VPUCM_0367 PF08502 LeuA allosteric (dimerisation) domain VPUCM_0368 PF08239 Bacterial SH3 domain VPUCM_0369 PF01569 PAP2 superfamily VPUCM_0370 PF13528 Glycosyl transferase family 1 VPUCM_0371 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_0371 PF03466 LysR substrate binding domain VPUCM_0372 PF00501 AMP-binding enzyme VPUCM_0373 PF00205 Thiamine pyrophosphate enzyme, central domain VPUCM_0373 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VPUCM_0373 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VPUCM_0374 PF10369 Small subunit of acetolactate synthase VPUCM_0374 PF13710 ACT domain VPUCM_0375 PF00990 GGDEF domain VPUCM_0375 PF02743 Cache domain VPUCM_0375 PF13426 PAS domain VPUCM_0376 PF00392 Bacterial regulatory proteins, gntR family VPUCM_0376 PF07729 FCD domain VPUCM_0377 PF00224 Pyruvate kinase, barrel domain VPUCM_0377 PF02887 Pyruvate kinase, alpha/beta domain VPUCM_0378 PF00455 VPUCM_0378 VPUCM_0378 PF08220 DeoR-like helix-turn-helix domain VPUCM_0379 PF01380 SIS domain VPUCM_0379 PF13522 Glutamine amidotransferase domain VPUCM_0380 PF11777 VPUCM_0380 VPUCM_0381 PF00072 Response regulator receiver domain VPUCM_0381 PF00486 Transcriptional regulatory protein, C terminal VPUCM_0382 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_0382 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_0383 PF00465 Iron-containing alcohol dehydrogenase VPUCM_0384 PF02733 Dak1 domain VPUCM_0385 PF02734 DAK2 domain VPUCM_0386 PF00381 PTS HPr component phosphorylation site VPUCM_0386 PF00391 PEP-utilising enzyme, mobile domain VPUCM_0386 PF02896 PEP-utilising enzyme, TIM barrel domain VPUCM_0386 PF03610 PTS system fructose IIA component VPUCM_0386 PF05524 PEP-utilising enzyme, N-terminal VPUCM_0387 PF00158 Sigma-54 interaction domain VPUCM_0387 PF00989 PAS fold VPUCM_0387 PF02954 Bacterial regulatory protein, Fis family VPUCM_0388 PF05068 Mannitol repressor VPUCM_0389 PF01232 Mannitol dehydrogenase Rossmann domain VPUCM_0389 PF08125 Mannitol dehydrogenase C-terminal domain VPUCM_0390 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VPUCM_0390 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VPUCM_0390 PF02378 Phosphotransferase system, EIIC VPUCM_0392 PF13444 Acetyltransferase (GNAT) domain VPUCM_0394 PF04402 Protein of unknown function (DUF541) VPUCM_0395 PF14321 VPUCM_0395 VPUCM_0397 PF03180 NLPA lipoprotein VPUCM_0398 PF00140 Sigma-70 factor, region 1 VPUCM_0398 PF03979 Sigma-70 factor, region 1 VPUCM_0398 PF04539 Sigma-70 region 3 VPUCM_0398 PF04542 Sigma-70 region 2 VPUCM_0398 PF04545 Sigma-70, region 4 VPUCM_0398 PF04546 Sigma-70, non-essential region VPUCM_0399 PF01807 CHC2 zinc finger VPUCM_0399 PF08275 DNA primase catalytic core, N-terminal domain VPUCM_0399 PF08278 DNA primase DnaG DnaB-binding VPUCM_0399 PF10410 DnaB-helicase binding domain of primase VPUCM_0399 PF13155 Toprim-like VPUCM_0400 PF09424 Yqey-like protein VPUCM_0401 PF01165 Ribosomal protein S21 VPUCM_0402 PF00814 Glycoprotease family VPUCM_0403 PF00561 alpha/beta hydrolase fold VPUCM_0404 PF02660 VPUCM_0404 VPUCM_0405 PF02152 Dihydroneopterin aldolase VPUCM_0406 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VPUCM_0407 PF02673 VPUCM_0407 VPUCM_0408 PF01743 Poly A polymerase head domain VPUCM_0408 PF01966 HD domain VPUCM_0408 PF12627 Probable RNA and SrmB- binding site of polymerase A VPUCM_0409 PF01471 Putative peptidoglycan binding domain VPUCM_0409 PF13401 AAA domain VPUCM_0410 PF16537 VPUCM_0410 VPUCM_0411 PF08239 Bacterial SH3 domain VPUCM_0412 PF01384 VPUCM_0412 VPUCM_0413 PF01865 Protein of unknown function DUF47 VPUCM_0414 PF01928 CYTH domain VPUCM_0414 PF05235 CHAD domain VPUCM_0415 PF00520 Ion transport protein VPUCM_0416 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VPUCM_0417 PF03710 Glutamate-ammonia ligase adenylyltransferase VPUCM_0417 PF08335 GlnD PII-uridylyltransferase VPUCM_0418 PF00294 pfkB family carbohydrate kinase VPUCM_0418 PF01467 Cytidylyltransferase VPUCM_0420 PF02321 Outer membrane efflux protein VPUCM_0421 PF00293 NUDIX domain VPUCM_0422 PF06853 VPUCM_0422 VPUCM_0423 PF00149 Calcineurin-like phosphoesterase VPUCM_0424 PF05728 Uncharacterised protein family (UPF0227) VPUCM_0425 PF00204 DNA gyrase B VPUCM_0425 PF00986 DNA gyrase B subunit, carboxyl terminus VPUCM_0425 PF01751 Toprim domain VPUCM_0425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_0426 PF00521 DNA gyrase/topoisomerase IV, subunit A VPUCM_0426 PF03989 DNA gyrase C-terminal domain, beta-propeller VPUCM_0427 PF13180 PDZ domain VPUCM_0427 PF13365 Trypsin-like peptidase domain VPUCM_0428 PF00595 PDZ domain (Also known as DHR or GLGF) VPUCM_0428 PF13180 PDZ domain VPUCM_0428 PF13365 Trypsin-like peptidase domain VPUCM_0429 PF06295 VPUCM_0429 VPUCM_0430 PF03969 AFG1-like ATPase VPUCM_0431 PF00572 Ribosomal protein L13 VPUCM_0432 PF00380 Ribosomal protein S9/S16 VPUCM_0433 PF00355 Rieske [2Fe-2S] domain VPUCM_0433 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal VPUCM_0434 PF00032 Cytochrome b(C-terminal)/b6/petD VPUCM_0434 PF00033 Cytochrome b(N-terminal)/b6/petB VPUCM_0435 PF02167 Cytochrome C1 family VPUCM_0436 PF00043 Glutathione S-transferase, C-terminal domain VPUCM_0436 PF13417 Glutathione S-transferase, N-terminal domain VPUCM_0437 PF04386 Stringent starvation protein B VPUCM_0438 PF04972 BON domain VPUCM_0439 PF13580 SIS domain VPUCM_0440 PF02021 Uncharacterised protein family UPF0102 VPUCM_0441 PF04348 LppC putative lipoprotein VPUCM_0442 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VPUCM_0443 PF01795 MraW methylase family VPUCM_0444 PF04999 VPUCM_0444 VPUCM_0445 PF00905 Penicillin binding protein transpeptidase domain VPUCM_0445 PF03717 Penicillin-binding Protein dimerisation domain VPUCM_0446 PF01225 Mur ligase family, catalytic domain VPUCM_0446 PF02875 Mur ligase family, glutamate ligase domain VPUCM_0446 PF08245 Mur ligase middle domain VPUCM_0447 PF01225 Mur ligase family, catalytic domain VPUCM_0447 PF02875 Mur ligase family, glutamate ligase domain VPUCM_0447 PF08245 Mur ligase middle domain VPUCM_0448 PF00953 Glycosyl transferase family 4 VPUCM_0448 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 VPUCM_0449 PF02875 Mur ligase family, glutamate ligase domain VPUCM_0449 PF08245 Mur ligase middle domain VPUCM_0450 PF01098 VPUCM_0450 VPUCM_0451 PF03033 Glycosyltransferase family 28 N-terminal domain VPUCM_0451 PF04101 Glycosyltransferase family 28 C-terminal domain VPUCM_0452 PF01225 Mur ligase family, catalytic domain VPUCM_0452 PF02875 Mur ligase family, glutamate ligase domain VPUCM_0452 PF08245 Mur ligase middle domain VPUCM_0453 PF03799 Cell division protein FtsQ VPUCM_0453 PF08478 POTRA domain, FtsQ-type VPUCM_0454 PF02491 SHS2 domain inserted in FTSA VPUCM_0454 PF14450 Cell division protein FtsA VPUCM_0455 PF00091 Tubulin/FtsZ family, GTPase domain VPUCM_0455 PF12327 FtsZ family, C-terminal domain VPUCM_0456 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase VPUCM_0457 PF05258 VPUCM_0457 VPUCM_0458 PF01043 SecA preprotein cross-linking domain VPUCM_0458 PF02810 SEC-C motif VPUCM_0458 PF07516 SecA Wing and Scaffold domain VPUCM_0458 PF07517 SecA DEAD-like domain VPUCM_0459 PF00293 NUDIX domain VPUCM_0460 PF01113 Dihydrodipicolinate reductase, N-terminus VPUCM_0460 PF05173 Dihydrodipicolinate reductase, C-terminus VPUCM_0461 PF00117 Glutamine amidotransferase class-I VPUCM_0461 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain VPUCM_0462 PF02142 MGS-like domain VPUCM_0462 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VPUCM_0462 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain VPUCM_0464 PF01925 VPUCM_0464 VPUCM_0467 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_0467 PF03466 LysR substrate binding domain VPUCM_0468 PF03458 VPUCM_0468 VPUCM_0469 PF01497 Periplasmic binding protein VPUCM_0470 PF03186 VPUCM_0470 VPUCM_0471 PF01048 Phosphorylase superfamily VPUCM_0472 PF07386 VPUCM_0472 VPUCM_0473 PF07992 Pyridine nucleotide-disulphide oxidoreductase VPUCM_0473 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VPUCM_0474 PF00310 Glutamine amidotransferases class-II VPUCM_0474 PF01493 GXGXG motif VPUCM_0474 PF01645 Conserved region in glutamate synthase VPUCM_0474 PF04898 Glutamate synthase central domain VPUCM_0475 PF07992 Pyridine nucleotide-disulphide oxidoreductase VPUCM_0475 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VPUCM_0476 PF00310 Glutamine amidotransferases class-II VPUCM_0476 PF01493 GXGXG motif VPUCM_0476 PF01645 Conserved region in glutamate synthase VPUCM_0476 PF04898 Glutamate synthase central domain VPUCM_0477 PF04055 Radical SAM superfamily VPUCM_0477 PF16199 VPUCM_0477 VPUCM_0478 PF00990 GGDEF domain VPUCM_0478 PF08448 PAS fold VPUCM_0478 PF13188 PAS domain VPUCM_0479 PF00072 Response regulator receiver domain VPUCM_0479 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_0479 PF01627 Hpt domain VPUCM_0479 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_0479 PF08448 PAS fold VPUCM_0481 PF00072 Response regulator receiver domain VPUCM_0481 PF00486 Transcriptional regulatory protein, C terminal VPUCM_0482 PF11697 VPUCM_0482 VPUCM_0483 PF03737 Demethylmenaquinone methyltransferase VPUCM_0485 PF00696 Amino acid kinase family VPUCM_0485 PF00742 Homoserine dehydrogenase VPUCM_0485 PF01842 ACT domain VPUCM_0485 PF03447 Homoserine dehydrogenase, NAD binding domain VPUCM_0485 PF13840 ACT domain VPUCM_0486 PF00288 GHMP kinases N terminal domain VPUCM_0486 PF08544 GHMP kinases C terminal VPUCM_0487 PF00291 Pyridoxal-phosphate dependent enzyme VPUCM_0487 PF14821 Threonine synthase N terminus VPUCM_0488 PF01228 Glycine radical VPUCM_0489 PF01261 Xylose isomerase-like TIM barrel VPUCM_0491 PF03167 Uracil DNA glycosylase superfamily VPUCM_0492 PF01814 Hemerythrin HHE cation binding domain VPUCM_0493 PF12065 VPUCM_0493 VPUCM_0494 PF01235 VPUCM_0494 VPUCM_0495 PF03883 VPUCM_0495 VPUCM_0496 PF00270 DEAD/DEAH box helicase VPUCM_0496 PF00271 Helicase conserved C-terminal domain VPUCM_0497 PF05175 Methyltransferase small domain VPUCM_0498 PF05525 VPUCM_0498 VPUCM_0499 PF00258 Flavodoxin VPUCM_0500 PF00589 Phage integrase family VPUCM_0500 PF02899 Phage integrase, N-terminal SAM-like domain VPUCM_0501 PF10411 Disulfide bond isomerase protein N-terminus VPUCM_0501 PF13098 Thioredoxin-like domain VPUCM_0502 PF01368 DHH family VPUCM_0502 PF02272 DHHA1 domain VPUCM_0503 PF00472 RF-1 domain VPUCM_0503 PF03462 PCRF domain VPUCM_0504 PF00152 tRNA synthetases class II (D, K and N) VPUCM_0504 PF01336 OB-fold nucleic acid binding domain VPUCM_0505 PF00158 Sigma-54 interaction domain VPUCM_0505 PF02954 Bacterial regulatory protein, Fis family VPUCM_0507 PF00248 Aldo/keto reductase family VPUCM_0509 PF02976 DNA mismatch repair enzyme MutH VPUCM_0510 PF00293 NUDIX domain VPUCM_0511 PF00391 PEP-utilising enzyme, mobile domain VPUCM_0511 PF01590 GAF domain VPUCM_0511 PF02896 PEP-utilising enzyme, TIM barrel domain VPUCM_0511 PF05524 PEP-utilising enzyme, N-terminal VPUCM_0512 PF01925 VPUCM_0512 VPUCM_0513 PF01790 VPUCM_0513 VPUCM_0514 PF00303 Thymidylate synthase VPUCM_0515 PF08014 VPUCM_0515 VPUCM_0516 PF02690 VPUCM_0516 VPUCM_0517 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_0517 PF03466 LysR substrate binding domain VPUCM_0518 PF01022 Bacterial regulatory protein, arsR family VPUCM_0519 PF01649 Ribosomal protein S20 VPUCM_0520 PF03023 VPUCM_0520 VPUCM_0521 PF01687 Riboflavin kinase VPUCM_0521 PF06574 FAD synthetase VPUCM_0522 PF00133 tRNA synthetases class I (I, L, M and V) VPUCM_0522 PF06827 Zinc finger found in FPG and IleRS VPUCM_0522 PF08264 Anticodon-binding domain of tRNA VPUCM_0523 PF01252 VPUCM_0523 VPUCM_0524 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VPUCM_0525 PF02401 LytB protein VPUCM_0526 PF00072 Response regulator receiver domain VPUCM_0526 PF04397 LytTr DNA-binding domain VPUCM_0527 PF06580 VPUCM_0527 VPUCM_0527 PF07694 5TMR of 5TMR-LYT VPUCM_0528 PF02554 VPUCM_0528 VPUCM_0528 PF13722 VPUCM_0528 VPUCM_0529 PF10973 VPUCM_0529 VPUCM_0531 PF13580 SIS domain VPUCM_0532 PF03702 Uncharacterised protein family (UPF0075) VPUCM_0533 PF00933 Glycosyl hydrolase family 3 N terminal domain VPUCM_0534 PF00793 DAHP synthetase I family VPUCM_0535 PF01817 Chorismate mutase type II VPUCM_0535 PF02153 Prephenate dehydrogenase VPUCM_0536 PF01551 Peptidase family M23 VPUCM_0537 PF07238 PilZ domain VPUCM_0538 PF00005 ABC transporter VPUCM_0538 PF12848 ABC transporter VPUCM_0539 PF01464 Transglycosylase SLT domain VPUCM_0539 PF14718 Soluble lytic murein transglycosylase L domain VPUCM_0540 PF01371 Trp repressor protein VPUCM_0541 PF01931 Protein of unknown function DUF84 VPUCM_0542 PF00800 Prephenate dehydratase VPUCM_0542 PF01817 Chorismate mutase type II VPUCM_0543 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VPUCM_0544 PF00497 Bacterial extracellular solute-binding proteins, family 3 VPUCM_0544 PF01464 Transglycosylase SLT domain VPUCM_0545 PF13525 Outer membrane lipoprotein VPUCM_0546 PF00849 RNA pseudouridylate synthase VPUCM_0546 PF01479 S4 domain VPUCM_0547 PF02578 Multi-copper polyphenol oxidoreductase laccase VPUCM_0548 PF00004 ATPase family associated with various cellular activities (AAA) VPUCM_0548 PF02861 Clp amino terminal domain VPUCM_0548 PF07724 AAA domain (Cdc48 subfamily) VPUCM_0548 PF10431 C-terminal, D2-small domain, of ClpB protein VPUCM_0550 PF08921 Domain of unknown function (DUF1904) VPUCM_0551 PF03411 Penicillin-insensitive murein endopeptidase VPUCM_0553 PF00037 4Fe-4S binding domain VPUCM_0554 PF01136 VPUCM_0554 VPUCM_0554 PF16325 VPUCM_0554 VPUCM_0555 PF04381 Putative exonuclease, RdgC VPUCM_0556 PF00072 Response regulator receiver domain VPUCM_0556 PF00486 Transcriptional regulatory protein, C terminal VPUCM_0557 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_0557 PF00989 PAS fold VPUCM_0557 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_0557 PF11808 VPUCM_0557 VPUCM_0558 PF12849 PBP superfamily domain VPUCM_0559 PF02541 Ppx/GppA phosphatase family VPUCM_0560 PF02503 Polyphosphate kinase middle domain VPUCM_0560 PF13089 Polyphosphate kinase N-terminal domain VPUCM_0560 PF13090 Polyphosphate kinase C-terminal domain VPUCM_0561 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_0562 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_0563 PF00005 ABC transporter VPUCM_0564 PF01895 PhoU domain VPUCM_0565 PF03976 Polyphosphate kinase 2 (PPK2) VPUCM_0566 PF03932 CutC family VPUCM_0567 PF00578 AhpC/TSA family VPUCM_0567 PF10417 C-terminal domain of 1-Cys peroxiredoxin VPUCM_0568 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_0568 PF03466 LysR substrate binding domain VPUCM_0569 PF01274 Malate synthase VPUCM_0570 PF00463 Isocitrate lyase family VPUCM_0571 PF00571 CBS domain VPUCM_0572 PF00089 Trypsin VPUCM_0573 PF02547 Queuosine biosynthesis protein VPUCM_0574 PF01702 Queuine tRNA-ribosyltransferase VPUCM_0575 PF02699 Preprotein translocase subunit VPUCM_0576 PF02355 Protein export membrane protein VPUCM_0576 PF07549 SecD/SecF GG Motif VPUCM_0576 PF13721 SecD export protein N-terminal TM region VPUCM_0577 PF02355 Protein export membrane protein VPUCM_0577 PF07549 SecD/SecF GG Motif VPUCM_0578 PF00459 Inositol monophosphatase family VPUCM_0579 PF00588 SpoU rRNA Methylase family VPUCM_0580 PF02082 Transcriptional regulator VPUCM_0581 PF00266 Aminotransferase class-V VPUCM_0582 PF01592 NifU-like N terminal domain VPUCM_0583 PF01521 Iron-sulphur cluster biosynthesis VPUCM_0584 PF00226 DnaJ domain VPUCM_0584 PF07743 HSCB C-terminal oligomerisation domain VPUCM_0585 PF00012 Hsp70 protein VPUCM_0586 PF00111 2Fe-2S iron-sulfur cluster binding domain VPUCM_0587 PF04384 Iron-sulphur cluster assembly VPUCM_0588 PF00883 Cytosol aminopeptidase family, catalytic domain VPUCM_0588 PF12404 VPUCM_0588 VPUCM_0589 PF00334 Nucleoside diphosphate kinase VPUCM_0590 PF04055 Radical SAM superfamily VPUCM_0591 PF13413 Helix-turn-helix domain VPUCM_0591 PF13464 VPUCM_0591 VPUCM_0592 PF04551 GcpE protein VPUCM_0593 PF03129 Anticodon binding domain VPUCM_0593 PF13393 Histidyl-tRNA synthetase VPUCM_0594 PF09976 Tetratricopeptide repeat VPUCM_0595 PF13360 PQQ-like domain VPUCM_0596 PF01926 50S ribosome-binding GTPase VPUCM_0596 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal VPUCM_0598 PF07191 zinc-ribbons VPUCM_0599 PF02601 VPUCM_0599 VPUCM_0599 PF13742 VPUCM_0599 VPUCM_0600 PF00478 IMP dehydrogenase / GMP reductase domain VPUCM_0600 PF00571 CBS domain VPUCM_0601 PF00117 Glutamine amidotransferase class-I VPUCM_0601 PF00958 GMP synthase C terminal domain VPUCM_0601 PF02540 NAD synthase VPUCM_0602 PF00589 Phage integrase family VPUCM_0602 PF13356 Domain of unknown function (DUF4102) VPUCM_0603 PF01966 HD domain VPUCM_0603 PF10237 VPUCM_0603 VPUCM_0606 PF04796 VPUCM_0606 VPUCM_0609 PF04610 VPUCM_0609 VPUCM_0612 PF08878 VPUCM_0612 VPUCM_0613 PF00270 DEAD/DEAH box helicase VPUCM_0619 PF03553 VPUCM_0619 VPUCM_0620 PF00182 Chitinase class I VPUCM_0621 PF01184 VPUCM_0621 VPUCM_0622 PF12710 haloacid dehalogenase-like hydrolase VPUCM_0623 PF01235 VPUCM_0623 VPUCM_0624 PF01266 FAD dependent oxidoreductase VPUCM_0625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_0625 PF03466 LysR substrate binding domain VPUCM_0627 PF01764 Lipase (class 3) VPUCM_0629 PF07969 Amidohydrolase family VPUCM_0631 PF01053 Cys/Met metabolism PLP-dependent enzyme VPUCM_0632 PF00202 Aminotransferase class-III VPUCM_0633 PF05853 Prokaryotic protein of unknown function (DUF849) VPUCM_0634 PF03553 VPUCM_0634 VPUCM_0635 PF09335 VPUCM_0635 VPUCM_0636 PF00583 Acetyltransferase (GNAT) family VPUCM_0636 PF00795 Carbon-nitrogen hydrolase VPUCM_0637 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_0637 PF03466 LysR substrate binding domain VPUCM_0638 PF13505 Outer membrane protein beta-barrel domain VPUCM_0639 PF01764 Lipase (class 3) VPUCM_0641 PF13737 VPUCM_0641 VPUCM_0642 PF07728 AAA domain (dynein-related subfamily) VPUCM_0643 PF10117 VPUCM_0643 VPUCM_0646 PF00665 Integrase core domain VPUCM_0646 PF13276 VPUCM_0646 VPUCM_0647 PF13356 Domain of unknown function (DUF4102) VPUCM_0648 PF01668 SmpB protein VPUCM_0649 PF03364 Polyketide cyclase / dehydrase and lipid transport VPUCM_0650 PF03658 RnfH family Ubiquitin VPUCM_0651 PF04355 SmpA / OmlA family VPUCM_0652 PF02463 RecF/RecN/SMC N terminal domain VPUCM_0653 PF11301 VPUCM_0653 VPUCM_0654 PF01513 ATP-NAD kinase VPUCM_0655 PF01025 GrpE VPUCM_0656 PF00375 Sodium:dicarboxylate symporter family VPUCM_0658 PF00012 Hsp70 protein VPUCM_0659 PF00226 DnaJ domain VPUCM_0659 PF00684 DnaJ central domain VPUCM_0659 PF01556 DnaJ C terminal domain VPUCM_0660 PF07963 Prokaryotic N-terminal methylation motif VPUCM_0660 PF16732 VPUCM_0660 VPUCM_0661 PF07963 Prokaryotic N-terminal methylation motif VPUCM_0661 PF12019 Type II transport protein GspH VPUCM_0664 PF07963 Prokaryotic N-terminal methylation motif VPUCM_0665 PF03806 VPUCM_0665 VPUCM_0666 PF14437 VPUCM_0666 VPUCM_0668 PF01769 Divalent cation transporter VPUCM_0669 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family VPUCM_0670 PF13609 Gram-negative porin VPUCM_0671 PF01272 Transcription elongation factor, GreA/GreB, C-term VPUCM_0671 PF03449 Transcription elongation factor, N-terminal VPUCM_0672 PF01985 CRS1 / YhbY (CRM) domain VPUCM_0673 PF01728 FtsJ-like methyltransferase VPUCM_0674 PF00004 ATPase family associated with various cellular activities (AAA) VPUCM_0674 PF01434 Peptidase family M41 VPUCM_0674 PF06480 FtsH Extracellular VPUCM_0675 PF00809 Pterin binding enzyme VPUCM_0676 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VPUCM_0676 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VPUCM_0676 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VPUCM_0676 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VPUCM_0677 PF03840 Preprotein translocase SecG subunit VPUCM_0678 PF02576 Uncharacterised BCR, YhbC family COG0779 VPUCM_0678 PF17384 VPUCM_0678 VPUCM_0679 PF08529 NusA N-terminal domain VPUCM_0679 PF13184 NusA-like KH domain VPUCM_0679 PF14520 Helix-hairpin-helix domain VPUCM_0680 PF00009 Elongation factor Tu GTP binding domain VPUCM_0680 PF04760 Translation initiation factor IF-2, N-terminal region VPUCM_0680 PF08364 VPUCM_0680 VPUCM_0680 PF11987 Translation-initiation factor 2 VPUCM_0681 PF02033 Ribosome-binding factor A VPUCM_0682 PF01509 TruB family pseudouridylate synthase (N terminal domain) VPUCM_0682 PF09157 Pseudouridine synthase II TruB, C-terminal VPUCM_0682 PF16198 VPUCM_0682 VPUCM_0683 PF00312 Ribosomal protein S15 VPUCM_0684 PF00013 KH domain VPUCM_0684 PF00575 S1 RNA binding domain VPUCM_0684 PF01138 3' exoribonuclease family, domain 1 VPUCM_0684 PF03725 3' exoribonuclease family, domain 2 VPUCM_0684 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain VPUCM_0686 PF12802 MarR family VPUCM_0687 PF01554 MatE VPUCM_0688 PF01136 VPUCM_0688 VPUCM_0689 PF01136 VPUCM_0689 VPUCM_0690 PF00563 EAL domain VPUCM_0690 PF00990 GGDEF domain VPUCM_0690 PF08448 PAS fold VPUCM_0690 PF13188 PAS domain VPUCM_0691 PF02036 SCP-2 sterol transfer family VPUCM_0692 PF13527 Acetyltransferase (GNAT) domain VPUCM_0694 PF03603 DNA polymerase III psi subunit VPUCM_0695 PF00583 Acetyltransferase (GNAT) family VPUCM_0697 PF00589 Phage integrase family VPUCM_0703 PF00817 impB/mucB/samB family VPUCM_0703 PF11798 IMS family HHH motif VPUCM_0703 PF11799 impB/mucB/samB family C-terminal domain VPUCM_0703 PF13438 VPUCM_0703 VPUCM_0704 PF00717 Peptidase S24-like VPUCM_0705 PF00589 Phage integrase family VPUCM_0709 PF13354 Beta-lactamase enzyme family VPUCM_0711 PF01609 Transposase DDE domain VPUCM_0711 PF13340 VPUCM_0711 VPUCM_0713 PF00011 Hsp20/alpha crystallin family VPUCM_0714 PF00004 ATPase family associated with various cellular activities (AAA) VPUCM_0714 PF02861 Clp amino terminal domain VPUCM_0714 PF07724 AAA domain (Cdc48 subfamily) VPUCM_0714 PF10431 C-terminal, D2-small domain, of ClpB protein VPUCM_0715 PF00563 EAL domain VPUCM_0715 PF00990 GGDEF domain VPUCM_0715 PF08447 PAS fold VPUCM_0715 PF13426 PAS domain VPUCM_0716 PF06146 VPUCM_0716 VPUCM_0717 PF01435 Peptidase family M48 VPUCM_0718 PF13180 PDZ domain VPUCM_0718 PF13365 Trypsin-like peptidase domain VPUCM_0719 PF13586 VPUCM_0719 VPUCM_0720 PF00929 Exonuclease VPUCM_0721 PF13280 VPUCM_0721 VPUCM_0722 PF02384 N-6 DNA Methylase VPUCM_0722 PF12161 HsdM N-terminal domain VPUCM_0723 PF01420 Type I restriction modification DNA specificity domain VPUCM_0724 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) VPUCM_0724 PF04851 Type III restriction enzyme, res subunit VPUCM_0724 PF12008 Type I restriction and modification enzyme - subunit R C terminal VPUCM_0725 PF04471 Restriction endonuclease VPUCM_0725 PF14338 VPUCM_0725 VPUCM_0728 PF07514 Putative helicase VPUCM_0729 PF10412 Type IV secretion-system coupling protein DNA-binding domain VPUCM_0729 PF12696 TraM recognition site of TraD and TraG VPUCM_0731 PF14348 VPUCM_0731 VPUCM_0733 PF01381 Helix-turn-helix VPUCM_0733 PF06114 Domain of unknown function (DUF955) VPUCM_0734 PF07178 VPUCM_0734 VPUCM_0735 PF05309 VPUCM_0735 VPUCM_0736 PF06586 VPUCM_0736 VPUCM_0737 PF03743 Bacterial conjugation TrbI-like protein VPUCM_0738 PF09676 VPUCM_0738 VPUCM_0740 PF08843 Nucleotidyl transferase of unknown function (DUF1814) VPUCM_0742 PF10411 Disulfide bond isomerase protein N-terminus VPUCM_0742 PF13098 Thioredoxin-like domain VPUCM_0743 PF11130 VPUCM_0743 VPUCM_0743 PF12846 AAA-like domain VPUCM_0745 PF10502 Signal peptidase, peptidase S26 VPUCM_0746 PF09673 VPUCM_0746 VPUCM_0747 PF06834 VPUCM_0747 VPUCM_0748 PF06986 VPUCM_0748 VPUCM_0749 PF04245 VPUCM_0749 VPUCM_0750 PF04607 Region found in RelA / SpoT proteins VPUCM_0751 PF04231 Endonuclease I VPUCM_0754 PF00436 Single-strand binding protein family VPUCM_0755 PF03837 VPUCM_0755 VPUCM_0757 PF09588 YqaJ-like viral recombinase domain VPUCM_0758 PF07728 AAA domain (dynein-related subfamily) VPUCM_0758 PF08406 VPUCM_0758 VPUCM_0760 PF11348 VPUCM_0760 VPUCM_0762 PF00092 von Willebrand factor type A domain VPUCM_0762 PF06213 VPUCM_0762 VPUCM_0763 PF04002 RadC-like JAB domain VPUCM_0765 PF08273 Zinc-binding domain of primase-helicase VPUCM_0765 PF13362 Toprim domain VPUCM_0767 PF03050 VPUCM_0767 VPUCM_0770 PF00072 Response regulator receiver domain VPUCM_0770 PF00158 Sigma-54 interaction domain VPUCM_0770 PF02954 Bacterial regulatory protein, Fis family VPUCM_0771 PF03050 VPUCM_0771 VPUCM_0772 PF00011 Hsp20/alpha crystallin family VPUCM_0773 PF00011 Hsp20/alpha crystallin family VPUCM_0774 PF00999 Sodium/hydrogen exchanger family VPUCM_0774 PF02254 TrkA-N domain VPUCM_0775 PF06146 VPUCM_0775 VPUCM_0776 PF01025 GrpE VPUCM_0777 PF00012 Hsp70 protein VPUCM_0778 PF10938 YfdX protein VPUCM_0779 PF00011 Hsp20/alpha crystallin family VPUCM_0781 PF00004 ATPase family associated with various cellular activities (AAA) VPUCM_0781 PF02861 Clp amino terminal domain VPUCM_0781 PF07724 AAA domain (Cdc48 subfamily) VPUCM_0781 PF10431 C-terminal, D2-small domain, of ClpB protein VPUCM_0782 PF00226 DnaJ domain VPUCM_0782 PF01556 DnaJ C terminal domain VPUCM_0783 PF13591 MerR HTH family regulatory protein VPUCM_0784 PF01435 Peptidase family M48 VPUCM_0785 PF13340 VPUCM_0785 VPUCM_0786 PF13384 Homeodomain-like domain VPUCM_0787 PF01116 Fructose-bisphosphate aldolase class-II VPUCM_0789 PF00990 GGDEF domain VPUCM_0790 PF12760 Transposase zinc-ribbon domain VPUCM_0791 PF00665 Integrase core domain VPUCM_0792 PF13728 F plasmid transfer operon protein VPUCM_0793 PF06122 VPUCM_0793 VPUCM_0794 PF07916 VPUCM_0794 VPUCM_0796 PF05280 Flagellar transcriptional activator (FlhC) VPUCM_0797 PF05247 Flagellar transcriptional activator (FlhD) VPUCM_0798 PF01464 Transglycosylase SLT domain VPUCM_0801 PF15943 VPUCM_0801 VPUCM_0802 PF00717 Peptidase S24-like VPUCM_0802 PF01381 Helix-turn-helix VPUCM_0803 PF00009 Elongation factor Tu GTP binding domain VPUCM_0803 PF03144 Elongation factor Tu domain 2 VPUCM_0803 PF16658 VPUCM_0803 VPUCM_0804 PF17320 VPUCM_0804 VPUCM_0805 PF01026 TatD related DNase VPUCM_0806 PF01773 Na+ dependent nucleoside transporter N-terminus VPUCM_0806 PF07662 Na+ dependent nucleoside transporter C-terminus VPUCM_0806 PF07670 Nucleoside recognition VPUCM_0807 PF01791 DeoC/LacD family aldolase VPUCM_0808 PF00591 Glycosyl transferase family, a/b domain VPUCM_0808 PF02885 Glycosyl transferase family, helical bundle domain VPUCM_0808 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain VPUCM_0809 PF01676 Metalloenzyme superfamily VPUCM_0810 PF01048 Phosphorylase superfamily VPUCM_0811 PF10144 VPUCM_0811 VPUCM_0812 PF00702 haloacid dehalogenase-like hydrolase VPUCM_0813 PF07238 PilZ domain VPUCM_0814 PF13481 AAA domain VPUCM_0814 PF13541 Subunit ChlI of Mg-chelatase VPUCM_0815 PF00009 Elongation factor Tu GTP binding domain VPUCM_0815 PF00679 Elongation factor G C-terminus VPUCM_0815 PF03144 Elongation factor Tu domain 2 VPUCM_0815 PF03764 Elongation factor G, domain IV VPUCM_0815 PF14492 Elongation Factor G, domain II VPUCM_0816 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_0816 PF03466 LysR substrate binding domain VPUCM_0817 PF06568 VPUCM_0817 VPUCM_0818 PF00501 AMP-binding enzyme VPUCM_0819 PF12833 Helix-turn-helix domain VPUCM_0822 PF08666 SAF domain VPUCM_0822 PF16976 VPUCM_0822 VPUCM_0823 PF00263 VPUCM_0823 VPUCM_0823 PF13629 VPUCM_0823 VPUCM_0825 PF13400 VPUCM_0825 VPUCM_0826 PF07811 VPUCM_0826 VPUCM_0827 PF07811 VPUCM_0827 VPUCM_0828 PF13614 AAA domain VPUCM_0829 PF00437 Type II/IV secretion system protein VPUCM_0830 PF00482 Type II secretion system (T2SS), protein F VPUCM_0831 PF00482 Type II secretion system (T2SS), protein F VPUCM_0832 PF07719 Tetratricopeptide repeat VPUCM_0832 PF13181 Tetratricopeptide repeat VPUCM_0832 PF13432 Tetratricopeptide repeat VPUCM_0833 PF14378 VPUCM_0833 VPUCM_0834 PF02417 VPUCM_0834 VPUCM_0835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_0835 PF03466 LysR substrate binding domain VPUCM_0836 PF13520 Amino acid permease VPUCM_0837 PF04074 Domain of unknown function (DUF386) VPUCM_0838 PF00703 Glycosyl hydrolases family 2 VPUCM_0838 PF02836 Glycosyl hydrolases family 2, TIM barrel domain VPUCM_0838 PF02837 Glycosyl hydrolases family 2, sugar binding domain VPUCM_0838 PF02929 Beta galactosidase small chain VPUCM_0838 PF16353 VPUCM_0838 VPUCM_0839 PF00356 Bacterial regulatory proteins, lacI family VPUCM_0839 PF13377 Periplasmic binding protein-like domain VPUCM_0840 PF16363 VPUCM_0840 VPUCM_0841 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain VPUCM_0841 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain VPUCM_0842 PF00288 GHMP kinases N terminal domain VPUCM_0842 PF08544 GHMP kinases C terminal VPUCM_0842 PF10509 Galactokinase galactose-binding signature VPUCM_0843 PF01263 Aldose 1-epimerase VPUCM_0844 PF00474 Sodium:solute symporter family VPUCM_0845 PF00571 CBS domain VPUCM_0845 PF03445 VPUCM_0845 VPUCM_0845 PF10335 VPUCM_0845 VPUCM_0846 PF00929 Exonuclease VPUCM_0847 PF00356 Bacterial regulatory proteins, lacI family VPUCM_0847 PF13377 Periplasmic binding protein-like domain VPUCM_0848 PF01588 Putative tRNA binding domain VPUCM_0849 PF06094 AIG2-like family VPUCM_0850 PF05940 VPUCM_0850 VPUCM_0851 PF01544 CorA-like Mg2+ transporter protein VPUCM_0852 PF01266 FAD dependent oxidoreductase VPUCM_0852 PF16901 VPUCM_0852 VPUCM_0853 PF00455 VPUCM_0853 VPUCM_0853 PF08220 DeoR-like helix-turn-helix domain VPUCM_0854 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VPUCM_0854 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VPUCM_0855 PF00230 Major intrinsic protein VPUCM_0857 PF07690 Major Facilitator Superfamily VPUCM_0858 PF03009 Glycerophosphoryl diester phosphodiesterase family VPUCM_0859 PF14602 Hexapeptide repeat of succinyl-transferase VPUCM_0859 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle VPUCM_0860 PF07130 YebG protein VPUCM_0861 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_0861 PF03466 LysR substrate binding domain VPUCM_0862 PF03595 Voltage-dependent anion channel VPUCM_0863 PF00884 Sulfatase VPUCM_0863 PF11893 VPUCM_0863 VPUCM_0864 PF04257 Exodeoxyribonuclease V, gamma subunit VPUCM_0865 PF00580 UvrD/REP helicase N-terminal domain VPUCM_0865 PF12705 PD-(D/E)XK nuclease superfamily VPUCM_0865 PF13361 UvrD-like helicase C-terminal domain VPUCM_0866 PF13538 UvrD-like helicase C-terminal domain VPUCM_0866 PF13604 AAA domain VPUCM_0868 PF00583 Acetyltransferase (GNAT) family VPUCM_0868 PF00696 Amino acid kinase family VPUCM_0869 PF11012 VPUCM_0869 VPUCM_0870 PF03562 MltA specific insert domain VPUCM_0870 PF06725 3D domain VPUCM_0871 PF00899 ThiF family VPUCM_0872 PF02657 Fe-S metabolism associated domain VPUCM_0873 PF00990 GGDEF domain VPUCM_0874 PF00266 Aminotransferase class-V VPUCM_0875 PF01965 DJ-1/PfpI family VPUCM_0876 PF02558 Ketopantoate reductase PanE/ApbA VPUCM_0876 PF08546 Ketopantoate reductase PanE/ApbA C terminal VPUCM_0877 PF03502 Nucleoside-specific channel-forming protein, Tsx VPUCM_0878 PF02190 ATP-dependent protease La (LON) domain VPUCM_0880 PF04542 Sigma-70 region 2 VPUCM_0880 PF04545 Sigma-70, region 4 VPUCM_0881 PF12973 ChrR Cupin-like domain VPUCM_0882 PF07690 Major Facilitator Superfamily VPUCM_0883 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VPUCM_0884 PF03923 VPUCM_0884 VPUCM_0885 PF05175 Methyltransferase small domain VPUCM_0885 PF08468 Methyltransferase small domain N-terminal VPUCM_0886 PF01722 BolA-like protein VPUCM_0887 PF05896 VPUCM_0887 VPUCM_0887 PF11973 VPUCM_0887 VPUCM_0888 PF03116 VPUCM_0888 VPUCM_0889 PF04205 FMN-binding domain VPUCM_0890 PF02508 VPUCM_0890 VPUCM_0891 PF02508 VPUCM_0891 VPUCM_0892 PF00111 2Fe-2S iron-sulfur cluster binding domain VPUCM_0892 PF00175 Oxidoreductase NAD-binding domain VPUCM_0892 PF00970 Oxidoreductase FAD-binding domain VPUCM_0893 PF02424 ApbE family VPUCM_0894 PF04400 VPUCM_0894 VPUCM_0895 PF10982 Protein of unknown function (DUF2789) VPUCM_0896 PF00817 impB/mucB/samB family VPUCM_0896 PF11798 IMS family HHH motif VPUCM_0896 PF11799 impB/mucB/samB family C-terminal domain VPUCM_0897 PF00270 DEAD/DEAH box helicase VPUCM_0897 PF00271 Helicase conserved C-terminal domain VPUCM_0897 PF16124 VPUCM_0897 VPUCM_0898 PF01272 Transcription elongation factor, GreA/GreB, C-term VPUCM_0899 PF11101 VPUCM_0899 VPUCM_0900 PF00704 Glycosyl hydrolases family 18 VPUCM_0901 PF00209 Sodium:neurotransmitter symporter family VPUCM_0902 PF14056 VPUCM_0902 VPUCM_0903 PF06786 VPUCM_0903 VPUCM_0904 PF04391 VPUCM_0904 VPUCM_0905 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VPUCM_0905 PF03129 Anticodon binding domain VPUCM_0905 PF04073 Aminoacyl-tRNA editing domain VPUCM_0906 PF01980 Uncharacterised protein family UPF0066 VPUCM_0907 PF01197 Ribosomal protein L31 VPUCM_0909 PF03806 VPUCM_0909 VPUCM_0910 PF02639 VPUCM_0910 VPUCM_0912 PF13302 Acetyltransferase (GNAT) domain VPUCM_0913 PF12069 VPUCM_0913 VPUCM_0914 PF04287 tRNA pseudouridine synthase C VPUCM_0915 PF00849 RNA pseudouridylate synthase VPUCM_0916 PF11944 VPUCM_0916 VPUCM_0917 PF01842 ACT domain VPUCM_0917 PF01909 Nucleotidyltransferase domain VPUCM_0917 PF01966 HD domain VPUCM_0917 PF08335 GlnD PII-uridylyltransferase VPUCM_0918 PF00557 Metallopeptidase family M24 VPUCM_0919 PF00318 Ribosomal protein S2 VPUCM_0920 PF00889 Elongation factor TS VPUCM_0921 PF00696 Amino acid kinase family VPUCM_0922 PF01765 Ribosome recycling factor VPUCM_0923 PF01255 Putative undecaprenyl diphosphate synthase VPUCM_0924 PF01148 Cytidylyltransferase family VPUCM_0925 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase VPUCM_0925 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal VPUCM_0925 PF13288 DXP reductoisomerase C-terminal domain VPUCM_0926 PF02163 Peptidase family M50 VPUCM_0926 PF13180 PDZ domain VPUCM_0927 PF01103 Surface antigen VPUCM_0927 PF07244 Surface antigen variable number repeat VPUCM_0928 PF03938 Outer membrane protein (OmpH-like) VPUCM_0929 PF00132 Bacterial transferase hexapeptide (six repeats) VPUCM_0929 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD VPUCM_0929 PF14602 Hexapeptide repeat of succinyl-transferase VPUCM_0930 PF07977 FabA-like domain VPUCM_0931 PF00132 Bacterial transferase hexapeptide (six repeats) VPUCM_0931 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 VPUCM_0932 PF02684 VPUCM_0932 VPUCM_0933 PF01351 Ribonuclease HII VPUCM_0934 PF01336 OB-fold nucleic acid binding domain VPUCM_0934 PF02811 PHP domain VPUCM_0934 PF07733 Bacterial DNA polymerase III alpha subunit VPUCM_0934 PF14579 Helix-hairpin-helix motif VPUCM_0935 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit VPUCM_0936 PF01171 PP-loop family VPUCM_0936 PF09179 TilS substrate binding domain VPUCM_0936 PF11734 TilS substrate C-terminal domain VPUCM_0937 PF00034 Cytochrome c VPUCM_0938 PF00543 Nitrogen regulatory protein P-II VPUCM_0939 PF03372 Endonuclease/Exonuclease/phosphatase family VPUCM_0940 PF06930 VPUCM_0940 VPUCM_0941 PF01464 Transglycosylase SLT domain VPUCM_0941 PF01476 LysM domain VPUCM_0942 PF00753 Metallo-beta-lactamase superfamily VPUCM_0942 PF16123 VPUCM_0942 VPUCM_0943 PF08241 Methyltransferase domain VPUCM_0944 PF00075 RNase H VPUCM_0945 PF00929 Exonuclease VPUCM_0947 PF01909 Nucleotidyltransferase domain VPUCM_0949 PF13508 Acetyltransferase (GNAT) domain VPUCM_0950 PF00916 VPUCM_0950 VPUCM_0950 PF01740 STAS domain VPUCM_0951 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VPUCM_0951 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VPUCM_0951 PF09317 VPUCM_0951 VPUCM_0952 PF13580 SIS domain VPUCM_0953 PF13230 Glutamine amidotransferases class-II VPUCM_0954 PF00950 VPUCM_0954 VPUCM_0955 PF00005 ABC transporter VPUCM_0956 PF01297 Periplasmic solute binding protein family VPUCM_0957 PF12833 Helix-turn-helix domain VPUCM_0959 PF04023 FeoA domain VPUCM_0960 PF02421 Ferrous iron transport protein B VPUCM_0960 PF07664 VPUCM_0960 VPUCM_0960 PF07670 Nucleoside recognition VPUCM_0961 PF09012 FeoC like transcriptional regulator VPUCM_0962 PF01230 HIT domain VPUCM_0963 PF00750 tRNA synthetases class I (R) VPUCM_0963 PF03485 Arginyl tRNA synthetase N terminal domain VPUCM_0963 PF05746 DALR anticodon binding domain VPUCM_0964 PF06185 YecM protein VPUCM_0965 PF00551 Formyl transferase VPUCM_0965 PF01842 ACT domain VPUCM_0966 PF04851 Type III restriction enzyme, res subunit VPUCM_0966 PF13307 Helicase C-terminal domain VPUCM_0967 PF00814 Glycoprotease family VPUCM_0969 PF03843 VPUCM_0969 VPUCM_0970 PF00561 alpha/beta hydrolase fold VPUCM_0971 PF00501 AMP-binding enzyme VPUCM_0971 PF13193 AMP-binding enzyme C-terminal domain VPUCM_0972 PF00570 HRDC domain VPUCM_0972 PF01612 3'-5' exonuclease VPUCM_0973 PF03776 Septum formation topological specificity factor MinE VPUCM_0974 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VPUCM_0975 PF03775 Septum formation inhibitor MinC, C-terminal domain VPUCM_0975 PF05209 Septum formation inhibitor MinC, N-terminal domain VPUCM_0976 PF05166 YcgL domain VPUCM_0977 PF13406 Transglycosylase SLT domain VPUCM_0978 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_0978 PF03466 LysR substrate binding domain VPUCM_0979 PF01773 Na+ dependent nucleoside transporter N-terminus VPUCM_0979 PF07662 Na+ dependent nucleoside transporter C-terminus VPUCM_0979 PF07670 Nucleoside recognition VPUCM_0980 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain VPUCM_0980 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain VPUCM_0981 PF08241 Methyltransferase domain VPUCM_0981 PF13395 HNH endonuclease VPUCM_0982 PF00109 Beta-ketoacyl synthase, N-terminal domain VPUCM_0982 PF02801 Beta-ketoacyl synthase, C-terminal domain VPUCM_0983 PF13561 Enoyl-(Acyl carrier protein) reductase VPUCM_0984 PF07977 FabA-like domain VPUCM_0985 PF00109 Beta-ketoacyl synthase, N-terminal domain VPUCM_0985 PF02801 Beta-ketoacyl synthase, C-terminal domain VPUCM_0986 PF11659 VPUCM_0986 VPUCM_0987 PF03176 MMPL family VPUCM_0988 PF03548 Outer membrane lipoprotein carrier protein LolA VPUCM_0989 PF13279 Thioesterase-like superfamily VPUCM_0990 PF00221 Aromatic amino acid lyase VPUCM_0991 PF00535 Glycosyl transferase family 2 VPUCM_0991 PF03279 VPUCM_0991 VPUCM_0993 PF00501 AMP-binding enzyme VPUCM_0993 PF13193 AMP-binding enzyme C-terminal domain VPUCM_0995 PF00550 Phosphopantetheine attachment site VPUCM_0996 PF00550 Phosphopantetheine attachment site VPUCM_0997 PF01553 Acyltransferase VPUCM_0998 PF13723 VPUCM_0998 VPUCM_1000 PF00891 O-methyltransferase VPUCM_1001 PF01494 FAD binding domain VPUCM_1004 PF01595 VPUCM_1004 VPUCM_1004 PF03471 Transporter associated domain VPUCM_1005 PF00270 DEAD/DEAH box helicase VPUCM_1005 PF00271 Helicase conserved C-terminal domain VPUCM_1006 PF02080 TrkA-C domain VPUCM_1006 PF02254 TrkA-N domain VPUCM_1007 PF02386 Cation transport protein VPUCM_1008 PF05547 VPUCM_1008 VPUCM_1010 PF02696 VPUCM_1010 VPUCM_1011 PF03480 Bacterial extracellular solute-binding protein, family 7 VPUCM_1012 PF04290 VPUCM_1012 VPUCM_1013 PF06808 VPUCM_1013 VPUCM_1015 PF00072 Response regulator receiver domain VPUCM_1015 PF00158 Sigma-54 interaction domain VPUCM_1015 PF02954 Bacterial regulatory protein, Fis family VPUCM_1016 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_1016 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_1016 PF02743 Cache domain VPUCM_1017 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VPUCM_1017 PF05697 Bacterial trigger factor protein (TF) VPUCM_1017 PF05698 Bacterial trigger factor protein (TF) C-terminus VPUCM_1018 PF00574 Clp protease VPUCM_1019 PF06689 ClpX C4-type zinc finger VPUCM_1019 PF07724 AAA domain (Cdc48 subfamily) VPUCM_1019 PF10431 C-terminal, D2-small domain, of ClpB protein VPUCM_1020 PF00004 ATPase family associated with various cellular activities (AAA) VPUCM_1020 PF02190 ATP-dependent protease La (LON) domain VPUCM_1020 PF05362 Lon protease (S16) C-terminal proteolytic domain VPUCM_1021 PF00216 Bacterial DNA-binding protein VPUCM_1022 PF13616 PPIC-type PPIASE domain VPUCM_1022 PF13624 SurA N-terminal domain VPUCM_1023 PF12836 Helix-hairpin-helix motif VPUCM_1024 PF01694 Rhomboid family VPUCM_1025 PF03942 VPUCM_1025 VPUCM_1026 PF01966 HD domain VPUCM_1026 PF13286 Phosphohydrolase-associated domain VPUCM_1027 PF13023 HD domain VPUCM_1028 PF00155 Aminotransferase class I and II VPUCM_1029 PF00425 chorismate binding enzyme VPUCM_1030 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VPUCM_1030 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VPUCM_1030 PF16582 VPUCM_1030 VPUCM_1031 PF12697 Alpha/beta hydrolase family VPUCM_1032 PF00378 Enoyl-CoA hydratase/isomerase family VPUCM_1033 PF13378 Enolase C-terminal domain-like VPUCM_1034 PF00501 AMP-binding enzyme VPUCM_1036 PF03601 VPUCM_1036 VPUCM_1037 PF01553 Acyltransferase VPUCM_1039 PF13305 WHG domain VPUCM_1040 PF04280 Tim44-like domain VPUCM_1040 PF07466 VPUCM_1040 VPUCM_1041 PF16576 VPUCM_1041 VPUCM_1042 PF00873 AcrB/AcrD/AcrF family VPUCM_1044 PF13505 Outer membrane protein beta-barrel domain VPUCM_1045 PF06844 Protein of unknown function (DUF1244) VPUCM_1046 PF00291 Pyridoxal-phosphate dependent enzyme VPUCM_1047 PF01037 AsnC family VPUCM_1047 PF13412 Winged helix-turn-helix DNA-binding VPUCM_1049 PF13622 Thioesterase-like superfamily VPUCM_1050 PF09619 Type III secretion system lipoprotein chaperone (YscW) VPUCM_1051 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain VPUCM_1054 PF00497 Bacterial extracellular solute-binding proteins, family 3 VPUCM_1054 PF00990 GGDEF domain VPUCM_1055 PF08722 TnsA endonuclease N terminal VPUCM_1056 PF00665 Integrase core domain VPUCM_1056 PF09299 Mu transposase, C-terminal VPUCM_1057 PF05621 VPUCM_1057 VPUCM_1058 PF12844 Helix-turn-helix domain VPUCM_1062 PF13676 TIR domain VPUCM_1063 PF06527 VPUCM_1063 VPUCM_1064 PF09614 VPUCM_1064 VPUCM_1065 PF09615 VPUCM_1065 VPUCM_1066 PF09618 CRISPR-associated protein (Cas_Csy4) VPUCM_1068 PF00931 NB-ARC domain VPUCM_1070 PF00588 SpoU rRNA Methylase family VPUCM_1071 PF11953 Domain of unknown function (DUF3470) VPUCM_1071 PF13187 4Fe-4S dicluster domain VPUCM_1073 PF00571 CBS domain VPUCM_1074 PF00122 E1-E2 ATPase VPUCM_1074 PF00403 Heavy-metal-associated domain VPUCM_1074 PF00702 haloacid dehalogenase-like hydrolase VPUCM_1075 PF01048 Phosphorylase superfamily VPUCM_1076 PF09002 Domain of unknown function (DUF1887) VPUCM_1077 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VPUCM_1078 PF01230 HIT domain VPUCM_1080 PF07233 Protein of unknown function (DUF1425) VPUCM_1082 PF13036 Protein of unknown function (DUF3897) VPUCM_1083 PF01633 Choline/ethanolamine kinase VPUCM_1084 PF05728 Uncharacterised protein family (UPF0227) VPUCM_1085 PF07992 Pyridine nucleotide-disulphide oxidoreductase VPUCM_1086 PF13302 Acetyltransferase (GNAT) domain VPUCM_1087 PF10972 VPUCM_1087 VPUCM_1088 PF00270 DEAD/DEAH box helicase VPUCM_1088 PF00271 Helicase conserved C-terminal domain VPUCM_1088 PF02559 CarD-like/TRCF domain VPUCM_1088 PF03461 TRCF domain VPUCM_1090 PF02687 VPUCM_1090 VPUCM_1090 PF12704 MacB-like periplasmic core domain VPUCM_1091 PF00005 ABC transporter VPUCM_1092 PF02687 VPUCM_1092 VPUCM_1092 PF12704 MacB-like periplasmic core domain VPUCM_1093 PF09835 VPUCM_1093 VPUCM_1094 PF00753 Metallo-beta-lactamase superfamily VPUCM_1094 PF03772 VPUCM_1094 VPUCM_1095 PF00005 ABC transporter VPUCM_1095 PF00664 ABC transporter transmembrane region VPUCM_1096 PF02606 Tetraacyldisaccharide-1-P 4'-kinase VPUCM_1097 PF03966 Trm112p-like protein VPUCM_1098 PF02348 Cytidylyltransferase VPUCM_1099 PF04293 VPUCM_1099 VPUCM_1100 PF04285 VPUCM_1100 VPUCM_1101 PF06798 VPUCM_1101 VPUCM_1101 PF08298 PrkA AAA domain VPUCM_1102 PF03887 YfbU domain VPUCM_1103 PF01891 Cobalt uptake substrate-specific transmembrane region VPUCM_1104 PF04055 Radical SAM superfamily VPUCM_1104 PF13353 4Fe-4S single cluster domain VPUCM_1105 PF09982 Uncharacterized protein conserved in bacteria (DUF2219) VPUCM_1106 PF01228 Glycine radical VPUCM_1106 PF02901 Pyruvate formate lyase VPUCM_1107 PF11840 VPUCM_1107 VPUCM_1109 PF00005 ABC transporter VPUCM_1110 PF00497 Bacterial extracellular solute-binding proteins, family 3 VPUCM_1111 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_1112 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_1113 PF17291 VPUCM_1113 VPUCM_1116 PF00271 Helicase conserved C-terminal domain VPUCM_1116 PF02151 UvrB/uvrC motif VPUCM_1116 PF04851 Type III restriction enzyme, res subunit VPUCM_1116 PF12344 Ultra-violet resistance protein B VPUCM_1117 PF00072 Response regulator receiver domain VPUCM_1117 PF00158 Sigma-54 interaction domain VPUCM_1117 PF02954 Bacterial regulatory protein, Fis family VPUCM_1118 PF01627 Hpt domain VPUCM_1119 PF01933 Uncharacterised protein family UPF0052 VPUCM_1120 PF04055 Radical SAM superfamily VPUCM_1120 PF06463 Molybdenum Cofactor Synthesis C VPUCM_1120 PF13353 4Fe-4S single cluster domain VPUCM_1121 PF00994 Probable molybdopterin binding domain VPUCM_1122 PF01967 MoaC family VPUCM_1123 PF02597 ThiS family VPUCM_1124 PF02391 MoaE protein VPUCM_1125 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VPUCM_1126 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_1127 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_1127 PF12911 VPUCM_1127 VPUCM_1128 PF00005 ABC transporter VPUCM_1128 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VPUCM_1129 PF00005 ABC transporter VPUCM_1129 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VPUCM_1130 PF13409 Glutathione S-transferase, N-terminal domain VPUCM_1130 PF13410 Glutathione S-transferase, C-terminal domain VPUCM_1132 PF02308 VPUCM_1132 VPUCM_1132 PF13194 VPUCM_1132 VPUCM_1133 PF01515 Phosphate acetyl/butaryl transferase VPUCM_1133 PF07085 DRTGG domain VPUCM_1133 PF13500 AAA domain VPUCM_1134 PF00871 Acetokinase family VPUCM_1135 PF04217 VPUCM_1135 VPUCM_1136 PF04392 ABC transporter substrate binding protein VPUCM_1137 PF02653 VPUCM_1137 VPUCM_1138 PF00005 ABC transporter VPUCM_1139 PF00128 Alpha amylase, catalytic domain VPUCM_1139 PF02903 Alpha amylase, N-terminal ig-like domain VPUCM_1140 PF00990 GGDEF domain VPUCM_1141 PF02445 Quinolinate synthetase A protein VPUCM_1142 PF07885 Ion channel VPUCM_1143 PF03994 VPUCM_1143 VPUCM_1144 PF06693 VPUCM_1144 VPUCM_1145 PF03738 Glutathionylspermidine synthase preATP-grasp VPUCM_1146 PF03695 Uncharacterised protein family (UPF0149) VPUCM_1147 PF00072 Response regulator receiver domain VPUCM_1147 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_1147 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_1147 PF02743 Cache domain VPUCM_1148 PF06610 VPUCM_1148 VPUCM_1150 PF00665 Integrase core domain VPUCM_1150 PF13276 VPUCM_1150 VPUCM_1151 PF05869 VPUCM_1151 VPUCM_1152 PF07728 AAA domain (dynein-related subfamily) VPUCM_1153 PF10117 VPUCM_1153 VPUCM_1155 PF01844 HNH endonuclease VPUCM_1159 PF00176 SNF2 family N-terminal domain VPUCM_1159 PF00271 Helicase conserved C-terminal domain VPUCM_1160 PF12728 Helix-turn-helix domain VPUCM_1161 PF02384 N-6 DNA Methylase VPUCM_1161 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) VPUCM_1162 PF13304 AAA domain VPUCM_1164 PF01420 Type I restriction modification DNA specificity domain VPUCM_1165 PF00069 Protein kinase domain VPUCM_1165 PF08378 VPUCM_1165 VPUCM_1168 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VPUCM_1168 PF00672 HAMP domain VPUCM_1169 PF16576 VPUCM_1169 VPUCM_1170 PF00873 AcrB/AcrD/AcrF family VPUCM_1171 PF01047 MarR family VPUCM_1172 PF03547 VPUCM_1172 VPUCM_1174 PF00579 tRNA synthetases class I (W and Y) VPUCM_1176 PF03372 Endonuclease/Exonuclease/phosphatase family VPUCM_1177 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) VPUCM_1179 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_1179 PF03466 LysR substrate binding domain VPUCM_1180 PF13679 VPUCM_1180 VPUCM_1181 PF01262 Alanine dehydrogenase/PNT, C-terminal domain VPUCM_1181 PF05222 Alanine dehydrogenase/PNT, N-terminal domain VPUCM_1182 PF01037 AsnC family VPUCM_1182 PF13412 Winged helix-turn-helix DNA-binding VPUCM_1183 PF01580 FtsK/SpoIIIE family VPUCM_1183 PF09397 Ftsk gamma domain VPUCM_1183 PF13491 VPUCM_1183 VPUCM_1184 PF03548 Outer membrane lipoprotein carrier protein LolA VPUCM_1185 PF00004 ATPase family associated with various cellular activities (AAA) VPUCM_1185 PF12002 MgsA AAA+ ATPase C terminal VPUCM_1185 PF16193 VPUCM_1185 VPUCM_1186 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VPUCM_1186 PF02403 Seryl-tRNA synthetase N-terminal domain VPUCM_1189 PF01258 Prokaryotic dksA/traR C4-type zinc finger VPUCM_1190 PF00202 Aminotransferase class-III VPUCM_1191 PF04055 Radical SAM superfamily VPUCM_1191 PF06968 Biotin and Thiamin Synthesis associated domain VPUCM_1192 PF00155 Aminotransferase class I and II VPUCM_1193 PF08241 Methyltransferase domain VPUCM_1194 PF13500 AAA domain VPUCM_1196 PF01435 Peptidase family M48 VPUCM_1197 PF12680 SnoaL-like domain VPUCM_1198 PF00106 short chain dehydrogenase VPUCM_1199 PF01593 Flavin containing amine oxidoreductase VPUCM_1200 PF07103 VPUCM_1200 VPUCM_1201 PF02353 Mycolic acid cyclopropane synthetase VPUCM_1202 PF11086 VPUCM_1202 VPUCM_1203 PF16036 VPUCM_1203 VPUCM_1204 PF12915 VPUCM_1204 VPUCM_1205 PF00206 Lyase VPUCM_1205 PF08328 Adenylosuccinate lyase C-terminal VPUCM_1206 PF04356 Protein of unknown function (DUF489) VPUCM_1207 PF03054 tRNA methyl transferase VPUCM_1209 PF00294 pfkB family carbohydrate kinase VPUCM_1210 PF00816 H-NS histone family VPUCM_1211 PF03553 VPUCM_1211 VPUCM_1214 PF00158 Sigma-54 interaction domain VPUCM_1214 PF02954 Bacterial regulatory protein, Fis family VPUCM_1215 PF01634 ATP phosphoribosyltransferase VPUCM_1215 PF08029 HisG, C-terminal domain VPUCM_1216 PF00815 Histidinol dehydrogenase VPUCM_1217 PF00155 Aminotransferase class I and II VPUCM_1218 PF00475 Imidazoleglycerol-phosphate dehydratase VPUCM_1218 PF08645 Polynucleotide kinase 3 phosphatase VPUCM_1219 PF00117 Glutamine amidotransferase class-I VPUCM_1220 PF00977 Histidine biosynthesis protein VPUCM_1221 PF00977 Histidine biosynthesis protein VPUCM_1222 PF01502 Phosphoribosyl-AMP cyclohydrolase VPUCM_1222 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase VPUCM_1223 PF02810 SEC-C motif VPUCM_1224 PF00563 EAL domain VPUCM_1224 PF08668 HDOD domain VPUCM_1226 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VPUCM_1227 PF01406 tRNA synthetases class I (C) catalytic domain VPUCM_1227 PF09190 DALR domain VPUCM_1228 PF00265 Thymidine kinase VPUCM_1232 PF11168 VPUCM_1232 VPUCM_1232 PF13515 VPUCM_1232 VPUCM_1233 PF13437 HlyD family secretion protein VPUCM_1233 PF13533 Biotin-lipoyl like VPUCM_1234 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_1234 PF03466 LysR substrate binding domain VPUCM_1235 PF00857 Isochorismatase family VPUCM_1237 PF00069 Protein kinase domain VPUCM_1237 PF13855 Leucine rich repeat VPUCM_1238 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_1238 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_1239 PF00072 Response regulator receiver domain VPUCM_1239 PF00486 Transcriptional regulatory protein, C terminal VPUCM_1240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VPUCM_1241 PF04055 Radical SAM superfamily VPUCM_1241 PF08497 VPUCM_1241 VPUCM_1241 PF11842 VPUCM_1241 VPUCM_1242 PF00563 EAL domain VPUCM_1242 PF00989 PAS fold VPUCM_1244 PF14056 VPUCM_1244 VPUCM_1245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_1245 PF03466 LysR substrate binding domain VPUCM_1246 PF01717 Cobalamin-independent synthase, Catalytic domain VPUCM_1246 PF08267 Cobalamin-independent synthase, N-terminal domain VPUCM_1247 PF16549 VPUCM_1247 VPUCM_1248 PF03795 YCII-related domain VPUCM_1249 PF03061 Thioesterase superfamily VPUCM_1250 PF04279 VPUCM_1250 VPUCM_1252 PF00072 Response regulator receiver domain VPUCM_1252 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_1252 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_1253 PF17327 VPUCM_1253 VPUCM_1254 PF00375 Sodium:dicarboxylate symporter family VPUCM_1255 PF00501 AMP-binding enzyme VPUCM_1255 PF13193 AMP-binding enzyme C-terminal domain VPUCM_1256 PF00027 Cyclic nucleotide-binding domain VPUCM_1256 PF13545 Crp-like helix-turn-helix domain VPUCM_1257 PF00290 Tryptophan synthase alpha chain VPUCM_1258 PF00291 Pyridoxal-phosphate dependent enzyme VPUCM_1259 PF00218 Indole-3-glycerol phosphate synthase VPUCM_1259 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase VPUCM_1260 PF00591 Glycosyl transferase family, a/b domain VPUCM_1260 PF02885 Glycosyl transferase family, helical bundle domain VPUCM_1261 PF00117 Glutamine amidotransferase class-I VPUCM_1262 PF00425 chorismate binding enzyme VPUCM_1262 PF04715 Anthranilate synthase component I, N terminal region VPUCM_1263 PF08056 VPUCM_1263 VPUCM_1264 PF02811 PHP domain VPUCM_1265 PF01300 Telomere recombination VPUCM_1266 PF00353 Hemolysin-type calcium-binding repeat (2 copies) VPUCM_1267 PF00849 RNA pseudouridylate synthase VPUCM_1267 PF01479 S4 domain VPUCM_1268 PF04269 Protein of unknown function, DUF440 VPUCM_1269 PF01132 Elongation factor P (EF-P) OB domain VPUCM_1269 PF08207 Elongation factor P (EF-P) KOW-like domain VPUCM_1269 PF09285 Elongation factor P, C-terminal VPUCM_1271 PF00136 DNA polymerase family B VPUCM_1271 PF03104 DNA polymerase family B, exonuclease domain VPUCM_1272 PF00072 Response regulator receiver domain VPUCM_1272 PF00196 Bacterial regulatory proteins, luxR family VPUCM_1273 PF01541 GIY-YIG catalytic domain VPUCM_1273 PF02151 UvrB/uvrC motif VPUCM_1273 PF08459 UvrC Helix-hairpin-helix N-terminal VPUCM_1273 PF14520 Helix-hairpin-helix domain VPUCM_1274 PF01066 CDP-alcohol phosphatidyltransferase VPUCM_1276 PF00202 Aminotransferase class-III VPUCM_1276 PF00282 Pyridoxal-dependent decarboxylase conserved domain VPUCM_1277 PF03435 Saccharopine dehydrogenase VPUCM_1277 PF16653 VPUCM_1277 VPUCM_1279 PF13740 ACT domain VPUCM_1280 PF13084 VPUCM_1280 VPUCM_1281 PF00994 Probable molybdopterin binding domain VPUCM_1282 PF00111 2Fe-2S iron-sulfur cluster binding domain VPUCM_1283 PF00268 Ribonucleotide reductase, small chain VPUCM_1284 PF00317 Ribonucleotide reductase, all-alpha domain VPUCM_1284 PF02867 Ribonucleotide reductase, barrel domain VPUCM_1284 PF03477 ATP cone domain VPUCM_1285 PF13489 Methyltransferase domain VPUCM_1286 PF00521 DNA gyrase/topoisomerase IV, subunit A VPUCM_1286 PF03989 DNA gyrase C-terminal domain, beta-propeller VPUCM_1289 PF02335 Cytochrome c552 VPUCM_1290 PF13435 Cytochrome c554 and c-prime VPUCM_1291 PF12800 4Fe-4S binding domain VPUCM_1291 PF13247 4Fe-4S dicluster domain VPUCM_1292 PF03916 VPUCM_1292 VPUCM_1293 PF01578 VPUCM_1293 VPUCM_1293 PF16327 VPUCM_1293 VPUCM_1294 PF08534 Redoxin VPUCM_1295 PF03918 Cytochrome C biogenesis protein VPUCM_1297 PF00925 GTP cyclohydrolase II VPUCM_1298 PF09375 Imelysin VPUCM_1299 PF06537 VPUCM_1299 VPUCM_1300 PF09375 Imelysin VPUCM_1301 PF07433 VPUCM_1301 VPUCM_1302 PF01471 Putative peptidoglycan binding domain VPUCM_1302 PF03734 L,D-transpeptidase catalytic domain VPUCM_1303 PF05951 VPUCM_1303 VPUCM_1304 PF00753 Metallo-beta-lactamase superfamily VPUCM_1305 PF11201 VPUCM_1305 VPUCM_1307 PF03480 Bacterial extracellular solute-binding protein, family 7 VPUCM_1308 PF04290 VPUCM_1308 VPUCM_1309 PF06808 VPUCM_1309 VPUCM_1310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_1310 PF07730 Histidine kinase VPUCM_1310 PF17200 VPUCM_1310 VPUCM_1311 PF00072 Response regulator receiver domain VPUCM_1311 PF00196 Bacterial regulatory proteins, luxR family VPUCM_1312 PF01047 MarR family VPUCM_1313 PF02028 BCCT family transporter VPUCM_1314 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VPUCM_1314 PF00672 HAMP domain VPUCM_1314 PF02743 Cache domain VPUCM_1315 PF00929 Exonuclease VPUCM_1316 PF00027 Cyclic nucleotide-binding domain VPUCM_1316 PF00571 CBS domain VPUCM_1316 PF03445 VPUCM_1316 VPUCM_1316 PF10335 VPUCM_1316 VPUCM_1317 PF13505 Outer membrane protein beta-barrel domain VPUCM_1318 PF00155 Aminotransferase class I and II VPUCM_1321 PF00155 Aminotransferase class I and II VPUCM_1321 PF00392 Bacterial regulatory proteins, gntR family VPUCM_1323 PF00152 tRNA synthetases class II (D, K and N) VPUCM_1323 PF01336 OB-fold nucleic acid binding domain VPUCM_1324 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VPUCM_1326 PF01242 6-pyruvoyl tetrahydropterin synthase VPUCM_1327 PF00583 Acetyltransferase (GNAT) family VPUCM_1328 PF00563 EAL domain VPUCM_1329 PF03313 VPUCM_1329 VPUCM_1329 PF03315 Serine dehydratase beta chain VPUCM_1330 PF03222 Tryptophan/tyrosine permease family VPUCM_1331 PF00293 NUDIX domain VPUCM_1332 PF07700 Heme NO binding VPUCM_1333 PF00072 Response regulator receiver domain VPUCM_1333 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_1333 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_1334 PF00425 chorismate binding enzyme VPUCM_1334 PF04715 Anthranilate synthase component I, N terminal region VPUCM_1335 PF05681 VPUCM_1335 VPUCM_1335 PF05683 Fumarase C-terminus VPUCM_1337 PF04317 VPUCM_1337 VPUCM_1338 PF05128 VPUCM_1338 VPUCM_1339 PF00158 Sigma-54 interaction domain VPUCM_1339 PF00989 PAS fold VPUCM_1340 PF13302 Acetyltransferase (GNAT) domain VPUCM_1341 PF13023 HD domain VPUCM_1342 PF11163 VPUCM_1342 VPUCM_1343 PF00589 Phage integrase family VPUCM_1343 PF13495 Phage integrase, N-terminal SAM-like domain VPUCM_1344 PF04471 Restriction endonuclease VPUCM_1346 PF13783 VPUCM_1346 VPUCM_1351 PF13673 Acetyltransferase (GNAT) domain VPUCM_1353 PF13419 Haloacid dehalogenase-like hydrolase VPUCM_1355 PF00583 Acetyltransferase (GNAT) family VPUCM_1356 PF00857 Isochorismatase family VPUCM_1361 PF11665 VPUCM_1361 VPUCM_1361 PF13671 AAA domain VPUCM_1365 PF14491 VPUCM_1365 VPUCM_1366 PF13175 AAA ATPase domain VPUCM_1368 PF11665 VPUCM_1368 VPUCM_1370 PF00583 Acetyltransferase (GNAT) family VPUCM_1381 PF00583 Acetyltransferase (GNAT) family VPUCM_1382 PF13471 VPUCM_1382 VPUCM_1383 PF03819 MazG nucleotide pyrophosphohydrolase domain VPUCM_1384 PF01636 Phosphotransferase enzyme family VPUCM_1385 PF00293 NUDIX domain VPUCM_1386 PF01810 VPUCM_1386 VPUCM_1387 PF11665 VPUCM_1387 VPUCM_1390 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VPUCM_1393 PF13561 Enoyl-(Acyl carrier protein) reductase VPUCM_1395 PF05488 PAAR motif VPUCM_1396 PF13527 Acetyltransferase (GNAT) domain VPUCM_1397 PF13643 VPUCM_1397 VPUCM_1398 PF00313 'Cold-shock' DNA-binding domain VPUCM_1398 PF06961 VPUCM_1398 VPUCM_1399 PF00293 NUDIX domain VPUCM_1403 PF13673 Acetyltransferase (GNAT) domain VPUCM_1404 PF11665 VPUCM_1404 VPUCM_1407 PF00583 Acetyltransferase (GNAT) family VPUCM_1411 PF01042 Endoribonuclease L-PSP VPUCM_1412 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system VPUCM_1413 PF05016 Plasmid stabilisation system protein VPUCM_1414 PF07885 Ion channel VPUCM_1417 PF00583 Acetyltransferase (GNAT) family VPUCM_1418 PF13783 VPUCM_1418 VPUCM_1421 PF13302 Acetyltransferase (GNAT) domain VPUCM_1422 PF13271 VPUCM_1422 VPUCM_1423 PF11665 VPUCM_1423 VPUCM_1424 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VPUCM_1426 PF00665 Integrase core domain VPUCM_1426 PF13276 VPUCM_1426 VPUCM_1428 PF00313 'Cold-shock' DNA-binding domain VPUCM_1428 PF05901 VPUCM_1428 VPUCM_1431 PF13420 Acetyltransferase (GNAT) domain VPUCM_1432 PF05168 HEPN domain VPUCM_1440 PF04973 VPUCM_1440 VPUCM_1446 PF16695 VPUCM_1446 VPUCM_1448 PF14113 Domain of unknown function (DUF4285) VPUCM_1450 PF13673 Acetyltransferase (GNAT) domain VPUCM_1457 PF01845 CcdB protein VPUCM_1458 PF07362 Post-segregation antitoxin CcdA VPUCM_1464 PF11665 VPUCM_1464 VPUCM_1465 PF04471 Restriction endonuclease VPUCM_1467 PF00805 Pentapeptide repeats (8 copies) VPUCM_1469 PF13508 Acetyltransferase (GNAT) domain VPUCM_1474 PF13737 VPUCM_1474 VPUCM_1475 PF00583 Acetyltransferase (GNAT) family VPUCM_1478 PF00583 Acetyltransferase (GNAT) family VPUCM_1479 PF13957 VPUCM_1479 VPUCM_1481 PF00583 Acetyltransferase (GNAT) family VPUCM_1481 PF11665 VPUCM_1481 VPUCM_1483 PF13737 VPUCM_1483 VPUCM_1485 PF11665 VPUCM_1485 VPUCM_1486 PF11665 VPUCM_1486 VPUCM_1488 PF13420 Acetyltransferase (GNAT) domain VPUCM_1490 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VPUCM_1491 PF13302 Acetyltransferase (GNAT) domain VPUCM_1492 PF00583 Acetyltransferase (GNAT) family VPUCM_1494 PF13306 Leucine rich repeats (6 copies) VPUCM_1496 PF11665 VPUCM_1496 VPUCM_1498 PF11665 VPUCM_1498 VPUCM_1499 PF13737 VPUCM_1499 VPUCM_1502 PF13527 Acetyltransferase (GNAT) domain VPUCM_1504 PF16804 VPUCM_1504 VPUCM_1505 PF00665 Integrase core domain VPUCM_1505 PF13276 VPUCM_1505 VPUCM_1506 PF13333 VPUCM_1506 VPUCM_1508 PF13692 Glycosyl transferases group 1 VPUCM_1509 PF04932 VPUCM_1509 VPUCM_1510 PF01943 VPUCM_1510 VPUCM_1511 PF00534 Glycosyl transferases group 1 VPUCM_1512 PF00534 Glycosyl transferases group 1 VPUCM_1512 PF13439 Glycosyltransferase Family 4 VPUCM_1513 PF00534 Glycosyl transferases group 1 VPUCM_1513 PF13579 Glycosyl transferase 4-like domain VPUCM_1514 PF00072 Response regulator receiver domain VPUCM_1514 PF00158 Sigma-54 interaction domain VPUCM_1514 PF02954 Bacterial regulatory protein, Fis family VPUCM_1515 PF01627 Hpt domain VPUCM_1517 PF02563 Polysaccharide biosynthesis/export protein VPUCM_1517 PF10531 SLBB domain VPUCM_1518 PF00691 OmpA family VPUCM_1519 PF13466 STAS domain VPUCM_1520 PF01068 ATP dependent DNA ligase domain VPUCM_1520 PF14743 DNA ligase OB-like domain VPUCM_1521 PF11279 VPUCM_1521 VPUCM_1522 PF01554 MatE VPUCM_1523 PF00677 Lumazine binding domain VPUCM_1524 PF14255 VPUCM_1524 VPUCM_1525 PF03881 Fructosamine kinase VPUCM_1526 PF00072 Response regulator receiver domain VPUCM_1527 PF00990 GGDEF domain VPUCM_1528 PF12290 VPUCM_1528 VPUCM_1529 PF00877 NlpC/P60 family VPUCM_1530 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VPUCM_1531 PF00293 NUDIX domain VPUCM_1532 PF00293 NUDIX domain VPUCM_1535 PF04116 VPUCM_1535 VPUCM_1536 PF03942 VPUCM_1536 VPUCM_1537 PF00480 ROK family VPUCM_1539 PF03992 Antibiotic biosynthesis monooxygenase VPUCM_1540 PF00300 Histidine phosphatase superfamily (branch 1) VPUCM_1542 PF13673 Acetyltransferase (GNAT) domain VPUCM_1544 PF00939 Sodium:sulfate symporter transmembrane region VPUCM_1545 PF00027 Cyclic nucleotide-binding domain VPUCM_1545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_1546 PF00072 Response regulator receiver domain VPUCM_1547 PF00563 EAL domain VPUCM_1547 PF00990 GGDEF domain VPUCM_1547 PF08447 PAS fold VPUCM_1548 PF01966 HD domain VPUCM_1548 PF11871 VPUCM_1548 VPUCM_1549 PF01810 VPUCM_1549 VPUCM_1550 PF11230 VPUCM_1550 VPUCM_1551 PF04055 Radical SAM superfamily VPUCM_1551 PF13353 4Fe-4S single cluster domain VPUCM_1552 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_1552 PF03466 LysR substrate binding domain VPUCM_1553 PF03741 VPUCM_1553 VPUCM_1555 PF13640 2OG-Fe(II) oxygenase superfamily VPUCM_1556 PF01966 HD domain VPUCM_1558 PF00465 Iron-containing alcohol dehydrogenase VPUCM_1559 PF03222 Tryptophan/tyrosine permease family VPUCM_1560 PF13487 HD domain VPUCM_1563 PF00005 ABC transporter VPUCM_1563 PF00664 ABC transporter transmembrane region VPUCM_1564 PF00005 ABC transporter VPUCM_1564 PF00664 ABC transporter transmembrane region VPUCM_1565 PF07963 Prokaryotic N-terminal methylation motif VPUCM_1566 PF03616 VPUCM_1566 VPUCM_1567 PF03352 Methyladenine glycosylase VPUCM_1569 PF00012 Hsp70 protein VPUCM_1569 PF12531 VPUCM_1569 VPUCM_1570 PF00012 Hsp70 protein VPUCM_1571 PF10816 VPUCM_1571 VPUCM_1572 PF00990 GGDEF domain VPUCM_1572 PF03924 CHASE domain VPUCM_1573 PF00929 Exonuclease VPUCM_1574 PF05099 Tellurite resistance protein TerB VPUCM_1575 PF09423 PhoD-like phosphatase VPUCM_1577 PF06629 VPUCM_1577 VPUCM_1578 PF00384 Molybdopterin oxidoreductase VPUCM_1578 PF01568 Molydopterin dinucleotide binding domain VPUCM_1578 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VPUCM_1579 PF12800 4Fe-4S binding domain VPUCM_1579 PF13247 4Fe-4S dicluster domain VPUCM_1580 PF04976 VPUCM_1580 VPUCM_1581 PF02613 Nitrate reductase delta subunit VPUCM_1582 PF12838 4Fe-4S dicluster domain VPUCM_1582 PF13237 4Fe-4S dicluster domain VPUCM_1583 PF02525 Flavodoxin-like fold VPUCM_1584 PF00270 DEAD/DEAH box helicase VPUCM_1584 PF00271 Helicase conserved C-terminal domain VPUCM_1584 PF04408 Helicase associated domain (HA2) VPUCM_1584 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold VPUCM_1584 PF11898 VPUCM_1584 VPUCM_1585 PF13505 Outer membrane protein beta-barrel domain VPUCM_1586 PF13505 Outer membrane protein beta-barrel domain VPUCM_1587 PF02028 BCCT family transporter VPUCM_1589 PF02397 VPUCM_1589 VPUCM_1590 PF13641 Glycosyltransferase like family 2 VPUCM_1591 PF00534 Glycosyl transferases group 1 VPUCM_1591 PF13439 Glycosyltransferase Family 4 VPUCM_1592 PF11173 VPUCM_1592 VPUCM_1593 PF00994 Probable molybdopterin binding domain VPUCM_1593 PF03205 Molybdopterin guanine dinucleotide synthesis protein B VPUCM_1593 PF03453 MoeA N-terminal region (domain I and II) VPUCM_1593 PF03454 MoeA C-terminal region (domain IV) VPUCM_1594 PF12804 MobA-like NTP transferase domain VPUCM_1595 PF00005 ABC transporter VPUCM_1596 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_1597 PF12849 PBP superfamily domain VPUCM_1598 PF00072 Response regulator receiver domain VPUCM_1598 PF00158 Sigma-54 interaction domain VPUCM_1598 PF02954 Bacterial regulatory protein, Fis family VPUCM_1599 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_1599 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_1599 PF17202 VPUCM_1599 VPUCM_1600 PF00005 ABC transporter VPUCM_1600 PF12848 ABC transporter VPUCM_1601 PF02634 FdhD/NarQ family VPUCM_1602 PF11749 VPUCM_1602 VPUCM_1603 PF11748 VPUCM_1603 VPUCM_1604 PF00037 4Fe-4S binding domain VPUCM_1604 PF12838 4Fe-4S dicluster domain VPUCM_1605 PF02613 Nitrate reductase delta subunit VPUCM_1607 PF00384 Molybdopterin oxidoreductase VPUCM_1607 PF01568 Molydopterin dinucleotide binding domain VPUCM_1607 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VPUCM_1608 PF13247 4Fe-4S dicluster domain VPUCM_1609 PF01292 Prokaryotic cytochrome b561 VPUCM_1611 PF03527 VPUCM_1611 VPUCM_1611 PF05593 VPUCM_1611 VPUCM_1612 PF15575 VPUCM_1612 VPUCM_1613 PF15575 VPUCM_1613 VPUCM_1615 PF15575 VPUCM_1615 VPUCM_1618 PF12796 Ankyrin repeats (3 copies) VPUCM_1620 PF15575 VPUCM_1620 VPUCM_1622 PF15575 VPUCM_1622 VPUCM_1624 PF00909 Ammonium Transporter Family VPUCM_1626 PF02146 Sir2 family VPUCM_1627 PF13416 Bacterial extracellular solute-binding protein VPUCM_1628 PF13416 Bacterial extracellular solute-binding protein VPUCM_1629 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_1630 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_1631 PF00005 ABC transporter VPUCM_1631 PF08402 TOBE domain VPUCM_1633 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase VPUCM_1634 PF11205 VPUCM_1634 VPUCM_1635 PF01171 PP-loop family VPUCM_1636 PF00582 Universal stress protein family VPUCM_1637 PF00027 Cyclic nucleotide-binding domain VPUCM_1637 PF13545 Crp-like helix-turn-helix domain VPUCM_1638 PF13386 VPUCM_1638 VPUCM_1639 PF03597 VPUCM_1639 VPUCM_1640 PF00122 E1-E2 ATPase VPUCM_1640 PF00403 Heavy-metal-associated domain VPUCM_1640 PF00702 haloacid dehalogenase-like hydrolase VPUCM_1640 PF12156 VPUCM_1640 VPUCM_1641 PF05751 VPUCM_1641 VPUCM_1642 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VPUCM_1642 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP VPUCM_1643 PF05545 VPUCM_1643 VPUCM_1644 PF02433 Cytochrome C oxidase, mono-heme subunit/FixO VPUCM_1645 PF00115 Cytochrome C and Quinol oxidase polypeptide I VPUCM_1647 PF08495 VPUCM_1647 VPUCM_1647 PF10442 VPUCM_1647 VPUCM_1648 PF00072 Response regulator receiver domain VPUCM_1648 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_1648 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_1649 PF12472 VPUCM_1649 VPUCM_1652 PF02486 VPUCM_1652 VPUCM_1653 PF07459 VPUCM_1653 VPUCM_1657 PF10734 VPUCM_1657 VPUCM_1658 PF05707 Zonular occludens toxin (Zot) VPUCM_1661 PF02303 Helix-destabilising protein VPUCM_1663 PF17537 VPUCM_1663 VPUCM_1665 PF13683 VPUCM_1665 VPUCM_1666 PF13551 Winged helix-turn helix VPUCM_1670 PF12321 VPUCM_1670 VPUCM_1671 PF06303 Organiser of macrodomain of Terminus of chromosome VPUCM_1671 PF17414 VPUCM_1671 VPUCM_1672 PF05362 Lon protease (S16) C-terminal proteolytic domain VPUCM_1672 PF13654 AAA domain VPUCM_1673 PF07977 FabA-like domain VPUCM_1674 PF11949 VPUCM_1674 VPUCM_1675 PF00005 ABC transporter VPUCM_1675 PF12848 ABC transporter VPUCM_1675 PF16326 VPUCM_1675 VPUCM_1676 PF05768 Glutaredoxin-like domain (DUF836) VPUCM_1677 PF01170 Putative RNA methylase family UPF0020 VPUCM_1677 PF02926 THUMP domain VPUCM_1677 PF10672 S-adenosylmethionine-dependent methyltransferase VPUCM_1678 PF07126 VPUCM_1678 VPUCM_1679 PF01180 Dihydroorotate dehydrogenase VPUCM_1680 PF05088 VPUCM_1680 VPUCM_1681 PF01433 Peptidase family M1 VPUCM_1681 PF11940 Domain of unknown function (DUF3458) VPUCM_1681 PF17432 VPUCM_1681 VPUCM_1683 PF00595 PDZ domain (Also known as DHR or GLGF) VPUCM_1683 PF03572 Peptidase family S41 VPUCM_1683 PF08180 VPUCM_1683 VPUCM_1683 PF11818 VPUCM_1683 VPUCM_1684 PF04352 ProQ/FINO family VPUCM_1684 PF17516 VPUCM_1684 VPUCM_1685 PF13185 GAF domain VPUCM_1686 PF00005 ABC transporter VPUCM_1686 PF00664 ABC transporter transmembrane region VPUCM_1687 PF04403 VPUCM_1687 VPUCM_1688 PF02470 VPUCM_1688 VPUCM_1689 PF01189 NOL1/NOP2/sun family VPUCM_1689 PF13636 pre-rRNA processing and ribosome biogenesis VPUCM_1689 PF17125 VPUCM_1689 VPUCM_1690 PF13509 S1 domain VPUCM_1692 PF14539 Domain of unknown function (DUF4442) VPUCM_1693 PF00793 DAHP synthetase I family VPUCM_1694 PF04461 Protein of unknown function (DUF520) VPUCM_1695 PF10414 Sirohaem synthase dimerisation region VPUCM_1695 PF13241 Putative NAD(P)-binding VPUCM_1695 PF14824 Sirohaem biosynthesis protein central VPUCM_1696 PF00497 Bacterial extracellular solute-binding proteins, family 3 VPUCM_1697 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_1698 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_1699 PF00005 ABC transporter VPUCM_1700 PF01027 Inhibitor of apoptosis-promoting Bax1 VPUCM_1702 PF04358 DsrC like protein VPUCM_1703 PF00708 Acylphosphatase VPUCM_1704 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VPUCM_1706 PF10672 S-adenosylmethionine-dependent methyltransferase VPUCM_1707 PF00353 Hemolysin-type calcium-binding repeat (2 copies) VPUCM_1708 PF03160 Calx-beta domain VPUCM_1709 PF03160 Calx-beta domain VPUCM_1710 PF02321 Outer membrane efflux protein VPUCM_1711 PF00691 OmpA family VPUCM_1712 PF13519 von Willebrand factor type A domain VPUCM_1713 PF02321 Outer membrane efflux protein VPUCM_1714 PF00691 OmpA family VPUCM_1715 PF11042 VPUCM_1715 VPUCM_1716 PF00990 GGDEF domain VPUCM_1716 PF13176 Tetratricopeptide repeat VPUCM_1716 PF13424 Tetratricopeptide repeat VPUCM_1717 PF06508 Queuosine biosynthesis protein QueC VPUCM_1718 PF04055 Radical SAM superfamily VPUCM_1718 PF13394 4Fe-4S single cluster domain VPUCM_1719 PF08282 haloacid dehalogenase-like hydrolase VPUCM_1720 PF00293 NUDIX domain VPUCM_1720 PF01569 PAP2 superfamily VPUCM_1721 PF00089 Trypsin VPUCM_1721 PF02839 Carbohydrate binding domain VPUCM_1722 PF00583 Acetyltransferase (GNAT) family VPUCM_1723 PF00501 AMP-binding enzyme VPUCM_1723 PF13193 AMP-binding enzyme C-terminal domain VPUCM_1723 PF16177 VPUCM_1723 VPUCM_1724 PF04303 PrpF protein VPUCM_1725 PF00330 Aconitase family (aconitate hydratase) VPUCM_1725 PF00694 Aconitase C-terminal domain VPUCM_1727 PF00285 Citrate synthase VPUCM_1728 PF13714 Phosphoenolpyruvate phosphomutase VPUCM_1729 PF00392 Bacterial regulatory proteins, gntR family VPUCM_1729 PF07729 FCD domain VPUCM_1730 PF04828 Glutathione-dependent formaldehyde-activating enzyme VPUCM_1732 PF03401 Tripartite tricarboxylate transporter family receptor VPUCM_1733 PF07331 VPUCM_1733 VPUCM_1734 PF01970 VPUCM_1734 VPUCM_1735 PF01925 VPUCM_1735 VPUCM_1736 PF16868 VPUCM_1736 VPUCM_1737 PF05844 YopD protein VPUCM_1738 PF04888 VPUCM_1738 VPUCM_1739 PF07720 Tetratricopeptide repeat VPUCM_1740 PF04792 V antigen (LcrV) protein VPUCM_1741 PF07216 VPUCM_1741 VPUCM_1742 PF09621 VPUCM_1742 VPUCM_1743 PF00771 FHIPEP family VPUCM_1744 PF14559 Tetratricopeptide repeat VPUCM_1745 PF09474 VPUCM_1745 VPUCM_1746 PF05932 Tir chaperone protein (CesT) family VPUCM_1747 PF09059 TyeA VPUCM_1748 PF07201 HrpJ-like domain VPUCM_1749 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VPUCM_1749 PF02874 ATP synthase alpha/beta family, beta-barrel domain VPUCM_1750 PF07321 Type III secretion protein YscO VPUCM_1752 PF01052 Surface presentation of antigens (SPOA) VPUCM_1753 PF00813 VPUCM_1753 VPUCM_1754 PF01313 VPUCM_1754 VPUCM_1755 PF01311 VPUCM_1755 VPUCM_1756 PF01312 FlhB HrpN YscU SpaS Family VPUCM_1757 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_1757 PF03466 LysR substrate binding domain VPUCM_1758 PF12146 Putative lysophospholipase VPUCM_1759 PF02129 X-Pro dipeptidyl-peptidase (S15 family) VPUCM_1760 PF12682 Flavodoxin VPUCM_1762 PF05932 Tir chaperone protein (CesT) family VPUCM_1764 PF05932 Tir chaperone protein (CesT) family VPUCM_1765 PF02661 Fic/DOC family VPUCM_1766 PF05932 Tir chaperone protein (CesT) family VPUCM_1767 PF02108 VPUCM_1767 VPUCM_1768 PF06578 VPUCM_1768 VPUCM_1769 PF01514 Secretory protein of YscJ/FliF family VPUCM_1770 PF17001 VPUCM_1770 VPUCM_1771 PF09025 YopR Core VPUCM_1772 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) VPUCM_1773 PF09392 Type III secretion needle MxiH like VPUCM_1774 PF08988 Protein of unknown function (DUF1895) VPUCM_1775 PF16693 VPUCM_1775 VPUCM_1775 PF16697 VPUCM_1775 VPUCM_1776 PF00263 VPUCM_1776 VPUCM_1776 PF03958 Bacterial type II/III secretion system short domain VPUCM_1777 PF05932 Tir chaperone protein (CesT) family VPUCM_1778 PF16806 VPUCM_1778 VPUCM_1779 PF12833 Helix-turn-helix domain VPUCM_1780 PF09619 Type III secretion system lipoprotein chaperone (YscW) VPUCM_1781 PF05932 Tir chaperone protein (CesT) family VPUCM_1783 PF00171 Aldehyde dehydrogenase family VPUCM_1784 PF00158 Sigma-54 interaction domain VPUCM_1784 PF01590 GAF domain VPUCM_1784 PF02954 Bacterial regulatory protein, Fis family VPUCM_1788 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain VPUCM_1788 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VPUCM_1789 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase VPUCM_1790 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain VPUCM_1790 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain VPUCM_1791 PF00072 Response regulator receiver domain VPUCM_1791 PF12431 VPUCM_1791 VPUCM_1792 PF00989 PAS fold VPUCM_1792 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_1792 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain VPUCM_1792 PF17203 VPUCM_1792 VPUCM_1793 PF02321 Outer membrane efflux protein VPUCM_1794 PF13437 HlyD family secretion protein VPUCM_1794 PF13533 Biotin-lipoyl like VPUCM_1795 PF12698 ABC-2 family transporter protein VPUCM_1796 PF12698 ABC-2 family transporter protein VPUCM_1797 PF00034 Cytochrome c VPUCM_1797 PF03150 Di-haem cytochrome c peroxidase VPUCM_1798 PF08238 Sel1 repeat VPUCM_1800 PF00696 Amino acid kinase family VPUCM_1801 PF06339 VPUCM_1801 VPUCM_1802 PF00202 Aminotransferase class-III VPUCM_1803 PF00583 Acetyltransferase (GNAT) family VPUCM_1804 PF02028 BCCT family transporter VPUCM_1805 PF00929 Exonuclease VPUCM_1806 PF00027 Cyclic nucleotide-binding domain VPUCM_1806 PF00571 CBS domain VPUCM_1806 PF03445 VPUCM_1806 VPUCM_1806 PF10335 VPUCM_1806 VPUCM_1807 PF00005 ABC transporter VPUCM_1807 PF00571 CBS domain VPUCM_1808 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_1809 PF04069 Substrate binding domain of ABC-type glycine betaine transport system VPUCM_1810 PF12261 VPUCM_1810 VPUCM_1811 PF00501 AMP-binding enzyme VPUCM_1812 PF14518 Iron-containing redox enzyme VPUCM_1813 PF00106 short chain dehydrogenase VPUCM_1814 PF13181 Tetratricopeptide repeat VPUCM_1815 PF00072 Response regulator receiver domain VPUCM_1815 PF00486 Transcriptional regulatory protein, C terminal VPUCM_1816 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_1816 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_1816 PF08521 VPUCM_1816 VPUCM_1817 PF00884 Sulfatase VPUCM_1822 PF01235 VPUCM_1822 VPUCM_1824 PF01810 VPUCM_1824 VPUCM_1825 PF02074 Carboxypeptidase Taq (M32) metallopeptidase VPUCM_1826 PF03279 VPUCM_1826 VPUCM_1828 PF13520 Amino acid permease VPUCM_1830 PF04204 Homoserine O-succinyltransferase VPUCM_1831 PF13431 Tetratricopeptide repeat VPUCM_1831 PF14559 Tetratricopeptide repeat VPUCM_1833 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein VPUCM_1834 PF00563 EAL domain VPUCM_1834 PF00990 GGDEF domain VPUCM_1835 PF00072 Response regulator receiver domain VPUCM_1835 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_1835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_1838 PF12464 Maltose acetyltransferase VPUCM_1838 PF14602 Hexapeptide repeat of succinyl-transferase VPUCM_1841 PF01928 CYTH domain VPUCM_1842 PF06127 VPUCM_1842 VPUCM_1843 PF04237 YjbR VPUCM_1844 PF01047 MarR family VPUCM_1845 PF00892 EamA-like transporter family VPUCM_1846 PF12833 Helix-turn-helix domain VPUCM_1847 PF01411 tRNA synthetases class II (A) VPUCM_1847 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VPUCM_1848 PF02368 Bacterial Ig-like domain (group 2) VPUCM_1850 PF00563 EAL domain VPUCM_1851 PF01368 DHH family VPUCM_1851 PF02833 DHHA2 domain VPUCM_1852 PF00202 Aminotransferase class-III VPUCM_1853 PF00171 Aldehyde dehydrogenase family VPUCM_1854 PF04371 Porphyromonas-type peptidyl-arginine deiminase VPUCM_1855 PF00795 Carbon-nitrogen hydrolase VPUCM_1856 PF01266 FAD dependent oxidoreductase VPUCM_1857 PF00171 Aldehyde dehydrogenase family VPUCM_1858 PF01381 Helix-turn-helix VPUCM_1858 PF07883 Cupin domain VPUCM_1859 PF07722 Peptidase C26 VPUCM_1860 PF00120 Glutamine synthetase, catalytic domain VPUCM_1861 PF03553 VPUCM_1861 VPUCM_1863 PF11695 VPUCM_1863 VPUCM_1864 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VPUCM_1865 PF13302 Acetyltransferase (GNAT) domain VPUCM_1866 PF01810 VPUCM_1866 VPUCM_1867 PF00583 Acetyltransferase (GNAT) family VPUCM_1868 PF03992 Antibiotic biosynthesis monooxygenase VPUCM_1871 PF10881 VPUCM_1871 VPUCM_1872 PF00043 Glutathione S-transferase, C-terminal domain VPUCM_1872 PF13417 Glutathione S-transferase, N-terminal domain VPUCM_1873 PF01557 Fumarylacetoacetate (FAA) hydrolase family VPUCM_1874 PF04209 homogentisate 1,2-dioxygenase VPUCM_1875 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VPUCM_1875 PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal VPUCM_1877 PF01546 Peptidase family M20/M25/M40 VPUCM_1877 PF07687 Peptidase dimerisation domain VPUCM_1878 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VPUCM_1879 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_1880 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_1880 PF12911 VPUCM_1880 VPUCM_1881 PF00005 ABC transporter VPUCM_1881 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VPUCM_1882 PF00005 ABC transporter VPUCM_1882 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VPUCM_1883 PF00557 Metallopeptidase family M24 VPUCM_1883 PF01321 Creatinase/Prolidase N-terminal domain VPUCM_1883 PF16188 VPUCM_1883 VPUCM_1883 PF16189 VPUCM_1883 VPUCM_1884 PF00801 PKD domain VPUCM_1884 PF01752 Collagenase VPUCM_1884 PF08453 Peptidase family M9 N-terminal VPUCM_1886 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_1887 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_1888 PF00005 ABC transporter VPUCM_1888 PF08402 TOBE domain VPUCM_1889 PF00701 Dihydrodipicolinate synthetase family VPUCM_1890 PF02423 Ornithine cyclodeaminase/mu-crystallin family VPUCM_1891 PF13416 Bacterial extracellular solute-binding protein VPUCM_1892 PF01266 FAD dependent oxidoreductase VPUCM_1893 PF05544 Proline racemase VPUCM_1894 PF00171 Aldehyde dehydrogenase family VPUCM_1895 PF00392 Bacterial regulatory proteins, gntR family VPUCM_1895 PF07729 FCD domain VPUCM_1897 PF03572 Peptidase family S41 VPUCM_1899 PF05971 Protein of unknown function (DUF890) VPUCM_1900 PF01863 Protein of unknown function DUF45 VPUCM_1901 PF00462 Glutaredoxin VPUCM_1902 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_1902 PF03466 LysR substrate binding domain VPUCM_1903 PF07690 Major Facilitator Superfamily VPUCM_1904 PF07209 VPUCM_1904 VPUCM_1905 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase VPUCM_1906 PF00005 ABC transporter VPUCM_1907 PF01032 FecCD transport family VPUCM_1908 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family VPUCM_1909 PF01432 Peptidase family M3 VPUCM_1909 PF08439 Oligopeptidase F VPUCM_1910 PF00300 Histidine phosphatase superfamily (branch 1) VPUCM_1911 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase VPUCM_1912 PF02654 VPUCM_1912 VPUCM_1913 PF02277 Phosphoribosyltransferase VPUCM_1915 PF13460 NADH(P)-binding VPUCM_1916 PF00375 Sodium:dicarboxylate symporter family VPUCM_1917 PF00929 Exonuclease VPUCM_1917 PF08411 Exonuclease C-terminal VPUCM_1918 PF03788 VPUCM_1918 VPUCM_1919 PF04172 VPUCM_1919 VPUCM_1920 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VPUCM_1920 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region VPUCM_1921 PF02222 ATP-grasp domain VPUCM_1922 PF05724 Thiopurine S-methyltransferase (TPMT) VPUCM_1924 PF00216 Bacterial DNA-binding protein VPUCM_1925 PF03547 VPUCM_1925 VPUCM_1926 PF01588 Putative tRNA binding domain VPUCM_1926 PF03147 Ferredoxin-fold anticodon binding domain VPUCM_1926 PF03483 B3/4 domain VPUCM_1926 PF03484 tRNA synthetase B5 domain VPUCM_1927 PF01409 tRNA synthetases class II core domain (F) VPUCM_1927 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain VPUCM_1928 PF00990 GGDEF domain VPUCM_1928 PF01814 Hemerythrin HHE cation binding domain VPUCM_1930 PF17131 VPUCM_1930 VPUCM_1931 PF03176 MMPL family VPUCM_1932 PF00440 Bacterial regulatory proteins, tetR family VPUCM_1933 PF13443 Cro/C1-type HTH DNA-binding domain VPUCM_1934 PF01906 Putative heavy-metal-binding VPUCM_1935 PF00453 Ribosomal protein L20 VPUCM_1936 PF01632 Ribosomal protein L35 VPUCM_1937 PF00707 Translation initiation factor IF-3, C-terminal domain VPUCM_1937 PF05198 Translation initiation factor IF-3, N-terminal domain VPUCM_1938 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VPUCM_1938 PF02824 TGS domain VPUCM_1938 PF03129 Anticodon binding domain VPUCM_1938 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VPUCM_1939 PF11383 VPUCM_1939 VPUCM_1940 PF07070 VPUCM_1940 VPUCM_1941 PF00392 Bacterial regulatory proteins, gntR family VPUCM_1941 PF07702 UTRA domain VPUCM_1942 PF01979 Amidohydrolase family VPUCM_1943 PF00491 Arginase family VPUCM_1944 PF01175 Urocanase VPUCM_1944 PF17391 VPUCM_1944 VPUCM_1944 PF17392 VPUCM_1944 VPUCM_1945 PF00221 Aromatic amino acid lyase VPUCM_1946 PF12119 VPUCM_1946 VPUCM_1947 PF04191 Phospholipid methyltransferase VPUCM_1948 PF01565 FAD binding domain VPUCM_1948 PF02913 FAD linked oxidases, C-terminal domain VPUCM_1948 PF13183 4Fe-4S dicluster domain VPUCM_1949 PF11813 VPUCM_1949 VPUCM_1950 PF10979 VPUCM_1950 VPUCM_1951 PF00691 OmpA family VPUCM_1951 PF13488 VPUCM_1951 VPUCM_1954 PF03846 Cell division inhibitor SulA VPUCM_1955 PF01259 SAICAR synthetase VPUCM_1956 PF09423 PhoD-like phosphatase VPUCM_1956 PF16655 VPUCM_1956 VPUCM_1958 PF02253 Phospholipase A1 VPUCM_1959 PF00270 DEAD/DEAH box helicase VPUCM_1959 PF00271 Helicase conserved C-terminal domain VPUCM_1959 PF04408 Helicase associated domain (HA2) VPUCM_1960 PF00390 Malic enzyme, N-terminal domain VPUCM_1960 PF03949 Malic enzyme, NAD binding domain VPUCM_1961 PF02698 DUF218 domain VPUCM_1962 PF00939 Sodium:sulfate symporter transmembrane region VPUCM_1963 PF00990 GGDEF domain VPUCM_1964 PF10977 VPUCM_1964 VPUCM_1965 PF00266 Aminotransferase class-V VPUCM_1966 PF10014 2OG-Fe dioxygenase VPUCM_1967 PF07992 Pyridine nucleotide-disulphide oxidoreductase VPUCM_1968 PF00005 ABC transporter VPUCM_1968 PF00664 ABC transporter transmembrane region VPUCM_1969 PF00005 ABC transporter VPUCM_1969 PF00664 ABC transporter transmembrane region VPUCM_1970 PF00291 Pyridoxal-phosphate dependent enzyme VPUCM_1971 PF00266 Aminotransferase class-V VPUCM_1972 PF06097 VPUCM_1972 VPUCM_1973 PF00027 Cyclic nucleotide-binding domain VPUCM_1973 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_1973 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_1974 PF00072 Response regulator receiver domain VPUCM_1976 PF04993 TfoX N-terminal domain VPUCM_1976 PF04994 TfoX C-terminal domain VPUCM_1978 PF08668 HDOD domain VPUCM_1979 PF03956 VPUCM_1979 VPUCM_1981 PF00282 Pyridoxal-dependent decarboxylase conserved domain VPUCM_1982 PF01380 SIS domain VPUCM_1982 PF01418 Helix-turn-helix domain, rpiR family VPUCM_1983 PF00465 Iron-containing alcohol dehydrogenase VPUCM_1984 PF00462 Glutaredoxin VPUCM_1985 PF02080 TrkA-C domain VPUCM_1985 PF06826 VPUCM_1985 VPUCM_1986 PF07055 Enoyl reductase FAD binding domain VPUCM_1986 PF12241 Trans-2-enoyl-CoA reductase catalytic region VPUCM_1986 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase VPUCM_1987 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VPUCM_1987 PF02770 Acyl-CoA dehydrogenase, middle domain VPUCM_1987 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VPUCM_1987 PF09317 VPUCM_1987 VPUCM_1988 PF00440 Bacterial regulatory proteins, tetR family VPUCM_1989 PF06965 Na+/H+ antiporter 1 VPUCM_1990 PF07143 Hydroxyneurosporene synthase (CrtC) VPUCM_1990 PF17186 VPUCM_1990 VPUCM_1991 PF02687 VPUCM_1991 VPUCM_1991 PF12704 MacB-like periplasmic core domain VPUCM_1992 PF00005 ABC transporter VPUCM_1993 PF01554 MatE VPUCM_1994 PF11066 VPUCM_1994 VPUCM_1994 PF13460 NADH(P)-binding VPUCM_1995 PF03264 NapC/NirT cytochrome c family, N-terminal region VPUCM_1996 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VPUCM_1997 PF13435 Cytochrome c554 and c-prime VPUCM_1997 PF14522 Cytochrome c7 VPUCM_1998 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) VPUCM_1999 PF11854 VPUCM_1999 VPUCM_2000 PF11140 VPUCM_2000 VPUCM_20001 PF11826 VPUCM_20001 VPUCM_20003 PF00005 ABC transporter VPUCM_20003 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VPUCM_20004 PF00005 ABC transporter VPUCM_20006 PF00925 GTP cyclohydrolase II VPUCM_20006 PF08719 Domain of unknown function (DUF1768) VPUCM_20007 PF00497 Bacterial extracellular solute-binding proteins, family 3 VPUCM_20008 PF00072 Response regulator receiver domain VPUCM_20008 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_20008 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_20008 PF17149 VPUCM_20008 VPUCM_20009 PF11686 VPUCM_20009 VPUCM_2001 PF07690 Major Facilitator Superfamily VPUCM_20010 PF01709 Transcriptional regulator VPUCM_20011 PF01098 VPUCM_20011 VPUCM_20014 PF00005 ABC transporter VPUCM_20015 PF02687 VPUCM_20015 VPUCM_20015 PF12704 MacB-like periplasmic core domain VPUCM_20016 PF17131 VPUCM_20016 VPUCM_20018 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_20018 PF06580 VPUCM_20018 VPUCM_20019 PF00072 Response regulator receiver domain VPUCM_20019 PF04397 LytTr DNA-binding domain VPUCM_2002 PF00849 RNA pseudouridylate synthase VPUCM_2002 PF01479 S4 domain VPUCM_20020 PF10026 VPUCM_20020 VPUCM_20021 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VPUCM_20022 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VPUCM_20022 PF17200 VPUCM_20022 VPUCM_20023 PF04134 VPUCM_20023 VPUCM_20024 PF14247 VPUCM_20024 VPUCM_20025 PF00132 Bacterial transferase hexapeptide (six repeats) VPUCM_20026 PF03616 VPUCM_20026 VPUCM_20028 PF00005 ABC transporter VPUCM_20029 PF00392 Bacterial regulatory proteins, gntR family VPUCM_2003 PF00271 Helicase conserved C-terminal domain VPUCM_2003 PF04851 Type III restriction enzyme, res subunit VPUCM_20030 PF03616 VPUCM_20030 VPUCM_20032 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase VPUCM_20033 PF11280 VPUCM_20033 VPUCM_20034 PF04219 VPUCM_20034 VPUCM_20035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_20035 PF03466 LysR substrate binding domain VPUCM_20036 PF02678 Pirin VPUCM_20037 PF07681 VPUCM_20037 VPUCM_20039 PF02805 Metal binding domain of Ada VPUCM_20039 PF06029 AlkA N-terminal domain VPUCM_20039 PF12833 Helix-turn-helix domain VPUCM_20040 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain VPUCM_20040 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain VPUCM_20042 PF02588 VPUCM_20042 VPUCM_20043 PF04828 Glutathione-dependent formaldehyde-activating enzyme VPUCM_20044 PF03600 Citrate transporter VPUCM_20046 PF01757 VPUCM_20046 VPUCM_20047 PF00440 Bacterial regulatory proteins, tetR family VPUCM_20048 PF12146 Putative lysophospholipase VPUCM_20049 PF00704 Glycosyl hydrolases family 18 VPUCM_20049 PF02010 VPUCM_20049 VPUCM_20049 PF02839 Carbohydrate binding domain VPUCM_20049 PF08329 Chitinase A, N-terminal domain VPUCM_2005 PF00072 Response regulator receiver domain VPUCM_2005 PF00486 Transcriptional regulatory protein, C terminal VPUCM_20050 PF11012 VPUCM_20050 VPUCM_20051 PF06865 Protein of unknown function (DUF1255) VPUCM_20053 PF00990 GGDEF domain VPUCM_20055 PF01554 MatE VPUCM_20056 PF00849 RNA pseudouridylate synthase VPUCM_20057 PF01323 DSBA-like thioredoxin domain VPUCM_20058 PF00753 Metallo-beta-lactamase superfamily VPUCM_20059 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_20059 PF03466 LysR substrate binding domain VPUCM_2006 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_20060 PF08282 haloacid dehalogenase-like hydrolase VPUCM_20062 PF00990 GGDEF domain VPUCM_20064 PF00756 Putative esterase VPUCM_20065 PF00107 Zinc-binding dehydrogenase VPUCM_20065 PF08240 Alcohol dehydrogenase GroES-like domain VPUCM_20066 PF00797 N-acetyltransferase VPUCM_20067 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_20067 PF03466 LysR substrate binding domain VPUCM_20068 PF00929 Exonuclease VPUCM_20069 PF00571 CBS domain VPUCM_20069 PF03445 VPUCM_20069 VPUCM_20069 PF10335 VPUCM_20069 VPUCM_2007 PF01386 Ribosomal L25p family VPUCM_20070 PF01614 Bacterial transcriptional regulator VPUCM_20070 PF09339 IclR helix-turn-helix domain VPUCM_20071 PF13561 Enoyl-(Acyl carrier protein) reductase VPUCM_20072 PF10688 VPUCM_20072 VPUCM_20073 PF07883 Cupin domain VPUCM_20074 PF02502 Ribose/Galactose Isomerase VPUCM_20074 PF12408 Ribose-5-phosphate isomerase VPUCM_20075 PF07859 alpha/beta hydrolase fold VPUCM_20076 PF00294 pfkB family carbohydrate kinase VPUCM_20077 PF01081 KDPG and KHG aldolase VPUCM_20078 PF00474 Sodium:solute symporter family VPUCM_20079 PF06178 Oligogalacturonate-specific porin protein (KdgM) VPUCM_2008 PF00583 Acetyltransferase (GNAT) family VPUCM_20081 PF00474 Sodium:solute symporter family VPUCM_20082 PF14583 Oligogalacturonate lyase VPUCM_20083 PF04954 Siderophore-interacting protein VPUCM_20083 PF08021 Siderophore-interacting FAD-binding domain VPUCM_20084 PF01810 VPUCM_20084 VPUCM_20085 PF01037 AsnC family VPUCM_20085 PF13412 Winged helix-turn-helix DNA-binding VPUCM_20086 PF03067 Chitin binding domain VPUCM_20087 PF12710 haloacid dehalogenase-like hydrolase VPUCM_20088 PF07883 Cupin domain VPUCM_20089 PF00805 Pentapeptide repeats (8 copies) VPUCM_20089 PF13599 Pentapeptide repeats (9 copies) VPUCM_2009 PF13673 Acetyltransferase (GNAT) domain VPUCM_20090 PF03922 OmpW family VPUCM_20091 PF16576 VPUCM_20091 VPUCM_20092 PF07690 Major Facilitator Superfamily VPUCM_20093 PF07073 Modulator of Rho-dependent transcription termination (ROF) VPUCM_20094 PF12706 Beta-lactamase superfamily domain VPUCM_20097 PF01661 Macro domain VPUCM_20098 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VPUCM_20099 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_20099 PF03466 LysR substrate binding domain VPUCM_2010 PF00149 Calcineurin-like phosphoesterase VPUCM_2010 PF02872 5'-nucleotidase, C-terminal domain VPUCM_20100 PF06742 Protein of unknown function (DUF1214) VPUCM_20100 PF06863 Protein of unknown function (DUF1254) VPUCM_20101 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_20101 PF03466 LysR substrate binding domain VPUCM_20102 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VPUCM_20103 PF13642 protein structure with unknown function VPUCM_20104 PF13419 Haloacid dehalogenase-like hydrolase VPUCM_20105 PF06041 Bacterial protein of unknown function (DUF924) VPUCM_20106 PF01432 Peptidase family M3 VPUCM_20110 PF05651 VPUCM_20110 VPUCM_20110 PF13556 PucR C-terminal helix-turn-helix domain VPUCM_20111 PF02447 VPUCM_20111 VPUCM_20112 PF02595 Glycerate kinase family VPUCM_20113 PF00155 Aminotransferase class I and II VPUCM_20113 PF00392 Bacterial regulatory proteins, gntR family VPUCM_20114 PF00892 EamA-like transporter family VPUCM_20117 PF00583 Acetyltransferase (GNAT) family VPUCM_20118 PF13419 Haloacid dehalogenase-like hydrolase VPUCM_20119 PF00583 Acetyltransferase (GNAT) family VPUCM_2012 PF00665 Integrase core domain VPUCM_2012 PF13276 VPUCM_2012 VPUCM_20120 PF13561 Enoyl-(Acyl carrier protein) reductase VPUCM_20121 PF13302 Acetyltransferase (GNAT) domain VPUCM_20122 PF03264 NapC/NirT cytochrome c family, N-terminal region VPUCM_20123 PF00384 Molybdopterin oxidoreductase VPUCM_20123 PF01568 Molydopterin dinucleotide binding domain VPUCM_20124 PF01569 PAP2 superfamily VPUCM_20125 PF02581 Thiamine monophosphate synthase/TENI VPUCM_20126 PF02110 Hydroxyethylthiazole kinase family VPUCM_20127 PF03070 TENA/THI-4/PQQC family VPUCM_20128 PF09084 NMT1/THI5 like VPUCM_20129 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_2013 PF03724 META domain VPUCM_20130 PF00005 ABC transporter VPUCM_20131 PF08543 Phosphomethylpyrimidine kinase VPUCM_20132 PF01523 Putative modulator of DNA gyrase VPUCM_20133 PF01523 Putative modulator of DNA gyrase VPUCM_20134 PF04013 Putative SAM-dependent RNA methyltransferase VPUCM_20135 PF11286 VPUCM_20135 VPUCM_20136 PF10928 Protein of unknown function (DUF2810) VPUCM_20137 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VPUCM_20137 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VPUCM_20138 PF03734 L,D-transpeptidase catalytic domain VPUCM_20139 PF03009 Glycerophosphoryl diester phosphodiesterase family VPUCM_2014 PF00072 Response regulator receiver domain VPUCM_2014 PF00196 Bacterial regulatory proteins, luxR family VPUCM_20140 PF00056 lactate/malate dehydrogenase, NAD binding domain VPUCM_20140 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain VPUCM_20141 PF00072 Response regulator receiver domain VPUCM_20141 PF00486 Transcriptional regulatory protein, C terminal VPUCM_20142 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_20142 PF00672 HAMP domain VPUCM_20142 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_20142 PF16750 VPUCM_20142 VPUCM_20143 PF00593 TonB dependent receptor VPUCM_20143 PF07715 TonB-dependent Receptor Plug Domain VPUCM_20144 PF11932 VPUCM_20144 VPUCM_20145 PF01618 VPUCM_20145 VPUCM_20146 PF01618 VPUCM_20146 VPUCM_20147 PF02472 Biopolymer transport protein ExbD/TolR VPUCM_20148 PF03544 Gram-negative bacterial TonB protein C-terminal VPUCM_20149 PF14559 Tetratricopeptide repeat VPUCM_2015 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_2015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_2015 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein VPUCM_20151 PF16357 VPUCM_20151 VPUCM_20152 PF10029 VPUCM_20152 VPUCM_20153 PF10670 VPUCM_20153 VPUCM_20156 PF01297 Periplasmic solute binding protein family VPUCM_20157 PF00005 ABC transporter VPUCM_20158 PF00950 VPUCM_20158 VPUCM_2016 PF00581 Rhodanese-like domain VPUCM_20161 PF00326 Prolyl oligopeptidase family VPUCM_20161 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain VPUCM_20163 PF07690 Major Facilitator Superfamily VPUCM_20164 PF00491 Arginase family VPUCM_20165 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VPUCM_20166 PF00753 Metallo-beta-lactamase superfamily VPUCM_20167 PF05618 Putative ATP-dependant zinc protease VPUCM_20168 PF08443 RimK-like ATP-grasp domain VPUCM_2017 PF07992 Pyridine nucleotide-disulphide oxidoreductase VPUCM_2017 PF13534 4Fe-4S dicluster domain VPUCM_2017 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VPUCM_20170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_20170 PF03466 LysR substrate binding domain VPUCM_20172 PF02311 AraC-like ligand binding domain VPUCM_20172 PF12833 Helix-turn-helix domain VPUCM_20173 PF04320 VPUCM_20173 VPUCM_20174 PF05787 Bacterial protein of unknown function (DUF839) VPUCM_20175 PF00232 Glycosyl hydrolase family 1 VPUCM_20176 PF13729 VPUCM_20176 VPUCM_20177 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_20177 PF13426 PAS domain VPUCM_20178 PF00072 Response regulator receiver domain VPUCM_20178 PF00158 Sigma-54 interaction domain VPUCM_20178 PF02954 Bacterial regulatory protein, Fis family VPUCM_20179 PF00990 GGDEF domain VPUCM_2018 PF02754 VPUCM_2018 VPUCM_20180 PF05525 VPUCM_20180 VPUCM_20181 PF16868 VPUCM_20181 VPUCM_20182 PF06808 VPUCM_20182 VPUCM_20183 PF01266 FAD dependent oxidoreductase VPUCM_20184 PF00031 Cystatin domain VPUCM_20185 PF01212 Beta-eliminating lyase VPUCM_20186 PF11140 VPUCM_20186 VPUCM_20188 PF01773 Na+ dependent nucleoside transporter N-terminus VPUCM_20188 PF07662 Na+ dependent nucleoside transporter C-terminus VPUCM_20188 PF07670 Nucleoside recognition VPUCM_20189 PF12060 VPUCM_20189 VPUCM_2019 PF09335 VPUCM_2019 VPUCM_20190 PF13532 2OG-Fe(II) oxygenase superfamily VPUCM_20191 PF00990 GGDEF domain VPUCM_20191 PF03924 CHASE domain VPUCM_20192 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VPUCM_20192 PF08376 Nitrate and nitrite sensing VPUCM_20193 PF01381 Helix-turn-helix VPUCM_20193 PF06114 Domain of unknown function (DUF955) VPUCM_20193 PF12268 VPUCM_20193 VPUCM_20195 PF00990 GGDEF domain VPUCM_20196 PF00875 DNA photolyase VPUCM_20196 PF03441 FAD binding domain of DNA photolyase VPUCM_20197 PF04244 Deoxyribodipyrimidine photo-lyase-related protein VPUCM_20198 PF00106 short chain dehydrogenase VPUCM_20199 PF10013 VPUCM_20199 VPUCM_2020 PF13416 Bacterial extracellular solute-binding protein VPUCM_20200 PF01625 Peptide methionine sulfoxide reductase VPUCM_20200 PF01641 SelR domain VPUCM_20201 PF02566 OsmC-like protein VPUCM_20202 PF12464 Maltose acetyltransferase VPUCM_20202 PF14602 Hexapeptide repeat of succinyl-transferase VPUCM_20205 PF10462 Peptidase M66 VPUCM_20206 PF08795 VPUCM_20206 VPUCM_20207 PF08279 HTH domain VPUCM_20207 PF13280 VPUCM_20207 VPUCM_20209 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_20209 PF03466 LysR substrate binding domain VPUCM_20210 PF13419 Haloacid dehalogenase-like hydrolase VPUCM_20211 PF00293 NUDIX domain VPUCM_20213 PF09695 VPUCM_20213 VPUCM_20214 PF00194 Eukaryotic-type carbonic anhydrase VPUCM_20215 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VPUCM_20216 PF16576 VPUCM_20216 VPUCM_20217 PF00005 ABC transporter VPUCM_20217 PF02687 VPUCM_20217 VPUCM_20217 PF12704 MacB-like periplasmic core domain VPUCM_20218 PF02321 Outer membrane efflux protein VPUCM_20219 PF00657 GDSL-like Lipase/Acylhydrolase VPUCM_2022 PF00005 ABC transporter VPUCM_20220 PF00082 Subtilase family VPUCM_20220 PF01483 Proprotein convertase P-domain VPUCM_20220 PF02225 PA domain VPUCM_20222 PF03611 VPUCM_20222 VPUCM_20223 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VPUCM_20224 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VPUCM_20225 PF00356 Bacterial regulatory proteins, lacI family VPUCM_20225 PF13377 Periplasmic binding protein-like domain VPUCM_20226 PF13419 Haloacid dehalogenase-like hydrolase VPUCM_20227 PF00202 Aminotransferase class-III VPUCM_20228 PF00266 Aminotransferase class-V VPUCM_20229 PF13343 Bacterial extracellular solute-binding protein VPUCM_2023 PF01066 CDP-alcohol phosphatidyltransferase VPUCM_20230 PF13673 Acetyltransferase (GNAT) domain VPUCM_20231 PF00005 ABC transporter VPUCM_20231 PF08402 TOBE domain VPUCM_20232 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_20233 PF00392 Bacterial regulatory proteins, gntR family VPUCM_20233 PF07702 UTRA domain VPUCM_20235 PF13505 Outer membrane protein beta-barrel domain VPUCM_20236 PF04393 VPUCM_20236 VPUCM_20237 PF01266 FAD dependent oxidoreductase VPUCM_20238 PF00246 Zinc carboxypeptidase VPUCM_20239 PF00691 OmpA family VPUCM_20239 PF01389 OmpA-like transmembrane domain VPUCM_2024 PF05433 VPUCM_2024 VPUCM_20240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_20240 PF03466 LysR substrate binding domain VPUCM_20241 PF01636 Phosphotransferase enzyme family VPUCM_20242 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_20242 PF03466 LysR substrate binding domain VPUCM_20244 PF07690 Major Facilitator Superfamily VPUCM_20246 PF03313 VPUCM_20246 VPUCM_20246 PF03315 Serine dehydratase beta chain VPUCM_20247 PF02698 DUF218 domain VPUCM_20249 PF03891 VPUCM_20249 VPUCM_2025 PF00158 Sigma-54 interaction domain VPUCM_2025 PF02954 Bacterial regulatory protein, Fis family VPUCM_20250 PF00293 NUDIX domain VPUCM_20251 PF01464 Transglycosylase SLT domain VPUCM_20252 PF05130 FlgN protein VPUCM_20253 PF04316 Anti-sigma-28 factor, FlgM VPUCM_20254 PF13144 SAF-like VPUCM_20255 PF00460 Flagella basal body rod protein VPUCM_20256 PF00460 Flagella basal body rod protein VPUCM_20256 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VPUCM_20257 PF03963 VPUCM_20257 VPUCM_20257 PF13860 FlgD Ig-like domain VPUCM_20257 PF13861 FlgD Tudor-like domain VPUCM_20258 PF00460 Flagella basal body rod protein VPUCM_20258 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VPUCM_20258 PF07559 Flagellar basal body protein FlaE VPUCM_20259 PF00460 Flagella basal body rod protein VPUCM_20259 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VPUCM_2026 PF03063 Prismane/CO dehydrogenase family VPUCM_20260 PF00460 Flagella basal body rod protein VPUCM_20260 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VPUCM_20261 PF02107 VPUCM_20261 VPUCM_20262 PF02119 VPUCM_20262 VPUCM_20263 PF10135 VPUCM_20263 VPUCM_20264 PF00460 Flagella basal body rod protein VPUCM_20264 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VPUCM_20265 PF00669 Bacterial flagellin N-terminal helical region VPUCM_20267 PF10101 VPUCM_20267 VPUCM_20268 PF00999 Sodium/hydrogen exchanger family VPUCM_20268 PF02254 TrkA-N domain VPUCM_20269 PF01070 FMN-dependent dehydrogenase VPUCM_2027 PF00111 2Fe-2S iron-sulfur cluster binding domain VPUCM_2027 PF00175 Oxidoreductase NAD-binding domain VPUCM_2027 PF00970 Oxidoreductase FAD-binding domain VPUCM_20270 PF11216 VPUCM_20270 VPUCM_20272 PF04828 Glutathione-dependent formaldehyde-activating enzyme VPUCM_20273 PF00581 Rhodanese-like domain VPUCM_20274 PF00166 Chaperonin 10 Kd subunit VPUCM_20275 PF00118 TCP-1/cpn60 chaperonin family VPUCM_20276 PF07968 Leukocidin/Hemolysin toxin family VPUCM_20277 PF01810 VPUCM_20277 VPUCM_20278 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_20278 PF03466 LysR substrate binding domain VPUCM_20279 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VPUCM_2028 PF10672 S-adenosylmethionine-dependent methyltransferase VPUCM_20281 PF00440 Bacterial regulatory proteins, tetR family VPUCM_20284 PF00149 Calcineurin-like phosphoesterase VPUCM_20284 PF02872 5'-nucleotidase, C-terminal domain VPUCM_20285 PF03060 Nitronate monooxygenase VPUCM_20286 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VPUCM_20287 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VPUCM_20288 PF01625 Peptide methionine sulfoxide reductase VPUCM_20289 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VPUCM_2029 PF00849 RNA pseudouridylate synthase VPUCM_20290 PF00455 VPUCM_20290 VPUCM_20290 PF08220 DeoR-like helix-turn-helix domain VPUCM_20291 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VPUCM_20292 PF00199 Catalase VPUCM_20292 PF06628 Catalase-related immune-responsive VPUCM_20293 PF12796 Ankyrin repeats (3 copies) VPUCM_20294 PF00857 Isochorismatase family VPUCM_20295 PF00293 NUDIX domain VPUCM_20297 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family VPUCM_20299 PF05433 VPUCM_20299 VPUCM_2030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VPUCM_2030 PF00672 HAMP domain VPUCM_20300 PF00892 EamA-like transporter family VPUCM_20301 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_20301 PF03466 LysR substrate binding domain VPUCM_20303 PF01389 OmpA-like transmembrane domain VPUCM_20304 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VPUCM_20304 PF12793 VPUCM_20304 VPUCM_20305 PF06629 VPUCM_20305 VPUCM_20306 PF04170 NlpE N-terminal domain VPUCM_20307 PF02001 VPUCM_20307 VPUCM_20308 PF02579 Dinitrogenase iron-molybdenum cofactor VPUCM_20309 PF04400 VPUCM_20309 VPUCM_2031 PF00209 Sodium:neurotransmitter symporter family VPUCM_20310 PF01636 Phosphotransferase enzyme family VPUCM_20312 PF00009 Elongation factor Tu GTP binding domain VPUCM_20312 PF00679 Elongation factor G C-terminus VPUCM_20312 PF03764 Elongation factor G, domain IV VPUCM_20312 PF14492 Elongation Factor G, domain II VPUCM_20313 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain VPUCM_20313 PF13378 Enolase C-terminal domain-like VPUCM_20314 PF07755 Protein of unknown function (DUF1611) VPUCM_20314 PF17396 VPUCM_20314 VPUCM_20315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_20315 PF03466 LysR substrate binding domain VPUCM_20317 PF07690 Major Facilitator Superfamily VPUCM_20318 PF00376 MerR family regulatory protein VPUCM_20318 PF09278 MerR, DNA binding VPUCM_20319 PF09622 VPUCM_20319 VPUCM_2032 PF13091 PLD-like domain VPUCM_2032 PF13396 VPUCM_2032 VPUCM_20322 PF04266 ASCH domain VPUCM_20323 PF13649 Methyltransferase domain VPUCM_20324 PF13091 PLD-like domain VPUCM_20325 PF13437 HlyD family secretion protein VPUCM_20325 PF13533 Biotin-lipoyl like VPUCM_20326 PF00873 AcrB/AcrD/AcrF family VPUCM_2033 PF01053 Cys/Met metabolism PLP-dependent enzyme VPUCM_20333 PF12710 haloacid dehalogenase-like hydrolase VPUCM_20334 PF00005 ABC transporter VPUCM_20334 PF08402 TOBE domain VPUCM_20335 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_20336 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_20337 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase VPUCM_20338 PF13343 Bacterial extracellular solute-binding protein VPUCM_20339 PF00392 Bacterial regulatory proteins, gntR family VPUCM_20339 PF07702 UTRA domain VPUCM_2034 PF00561 alpha/beta hydrolase fold VPUCM_20340 PF02028 BCCT family transporter VPUCM_20341 PF00703 Glycosyl hydrolases family 2 VPUCM_20342 PF00196 Bacterial regulatory proteins, luxR family VPUCM_20343 PF01381 Helix-turn-helix VPUCM_20344 PF00990 GGDEF domain VPUCM_20346 PF02321 Outer membrane efflux protein VPUCM_20347 PF00873 AcrB/AcrD/AcrF family VPUCM_20348 PF16576 VPUCM_20348 VPUCM_20349 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_20349 PF03466 LysR substrate binding domain VPUCM_2035 PF03280 Proteobacterial lipase chaperone protein VPUCM_20351 PF13416 Bacterial extracellular solute-binding protein VPUCM_20352 PF00579 tRNA synthetases class I (W and Y) VPUCM_20353 PF00196 Bacterial regulatory proteins, luxR family VPUCM_20355 PF04366 VPUCM_20355 VPUCM_20356 PF00391 PEP-utilising enzyme, mobile domain VPUCM_20356 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain VPUCM_20356 PF02896 PEP-utilising enzyme, TIM barrel domain VPUCM_20357 PF03618 VPUCM_20357 VPUCM_20358 PF00710 Asparaginase VPUCM_20359 PF00709 Adenylosuccinate synthetase VPUCM_2036 PF03352 Methyladenine glycosylase VPUCM_20360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_20360 PF03466 LysR substrate binding domain VPUCM_20361 PF12614 VPUCM_20361 VPUCM_20362 PF01810 VPUCM_20362 VPUCM_20363 PF09831 VPUCM_20363 VPUCM_20365 PF12625 VPUCM_20365 VPUCM_20365 PF12833 Helix-turn-helix domain VPUCM_20366 PF13561 Enoyl-(Acyl carrier protein) reductase VPUCM_20367 PF12973 ChrR Cupin-like domain VPUCM_20368 PF00107 Zinc-binding dehydrogenase VPUCM_20368 PF08240 Alcohol dehydrogenase GroES-like domain VPUCM_20369 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VPUCM_2037 PF00873 AcrB/AcrD/AcrF family VPUCM_20370 PF04399 Glutaredoxin 2, C terminal domain VPUCM_20370 PF13417 Glutathione S-transferase, N-terminal domain VPUCM_20371 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_20371 PF03466 LysR substrate binding domain VPUCM_20372 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_20372 PF03466 LysR substrate binding domain VPUCM_20373 PF17389 VPUCM_20373 VPUCM_20374 PF00270 DEAD/DEAH box helicase VPUCM_20374 PF00271 Helicase conserved C-terminal domain VPUCM_20375 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VPUCM_20377 PF13698 VPUCM_20377 VPUCM_20379 PF00155 Aminotransferase class I and II VPUCM_2038 PF13437 HlyD family secretion protein VPUCM_2038 PF13533 Biotin-lipoyl like VPUCM_20380 PF06445 GyrI-like small molecule binding domain VPUCM_20380 PF12833 Helix-turn-helix domain VPUCM_20381 PF14321 VPUCM_20381 VPUCM_20382 PF04325 Protein of unknown function (DUF465) VPUCM_20383 PF12973 ChrR Cupin-like domain VPUCM_20385 PF01297 Periplasmic solute binding protein family VPUCM_20386 PF00950 VPUCM_20386 VPUCM_20387 PF13561 Enoyl-(Acyl carrier protein) reductase VPUCM_2039 PF16576 VPUCM_2039 VPUCM_20392 PF00805 Pentapeptide repeats (8 copies) VPUCM_20394 PF01872 RibD C-terminal domain VPUCM_20395 PF00440 Bacterial regulatory proteins, tetR family VPUCM_20395 PF02909 Tetracyclin repressor, C-terminal all-alpha domain VPUCM_20396 PF02798 Glutathione S-transferase, N-terminal domain VPUCM_20396 PF13410 Glutathione S-transferase, C-terminal domain VPUCM_20398 PF00768 D-alanyl-D-alanine carboxypeptidase VPUCM_20398 PF07943 Penicillin-binding protein 5, C-terminal domain VPUCM_2040 PF04024 VPUCM_2040 VPUCM_20400 PF05036 Sporulation related domain VPUCM_20401 PF08534 Redoxin VPUCM_20402 PF00962 Adenosine/AMP deaminase VPUCM_20404 PF00313 'Cold-shock' DNA-binding domain VPUCM_20405 PF02678 Pirin VPUCM_20405 PF05726 Pirin C-terminal cupin domain VPUCM_20406 PF01734 Patatin-like phospholipase VPUCM_20407 PF01545 Cation efflux family VPUCM_20408 PF01047 MarR family VPUCM_2041 PF06667 VPUCM_2041 VPUCM_20411 PF03733 VPUCM_20411 VPUCM_20412 PF07690 Major Facilitator Superfamily VPUCM_20416 PF00884 Sulfatase VPUCM_20416 PF08019 VPUCM_20416 VPUCM_20417 PF01219 Prokaryotic diacylglycerol kinase VPUCM_20419 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_20419 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_2042 PF04012 VPUCM_2042 VPUCM_20420 PF00072 Response regulator receiver domain VPUCM_20420 PF00486 Transcriptional regulatory protein, C terminal VPUCM_20421 PF00106 short chain dehydrogenase VPUCM_20422 PF16561 VPUCM_20422 VPUCM_20424 PF01323 DSBA-like thioredoxin domain VPUCM_20426 PF11911 VPUCM_20426 VPUCM_20427 PF00255 Glutathione peroxidase VPUCM_20428 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase VPUCM_2043 PF00158 Sigma-54 interaction domain VPUCM_2043 PF02954 Bacterial regulatory protein, Fis family VPUCM_20430 PF01553 Acyltransferase VPUCM_20430 PF07690 Major Facilitator Superfamily VPUCM_20431 PF13443 Cro/C1-type HTH DNA-binding domain VPUCM_20432 PF01966 HD domain VPUCM_20434 PF07969 Amidohydrolase family VPUCM_20435 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin VPUCM_20437 PF01769 Divalent cation transporter VPUCM_20437 PF03448 MgtE intracellular N domain VPUCM_20438 PF03109 VPUCM_20438 VPUCM_20439 PF12900 Pyridoxamine 5'-phosphate oxidase VPUCM_2044 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VPUCM_20440 PF00155 Aminotransferase class I and II VPUCM_20440 PF00392 Bacterial regulatory proteins, gntR family VPUCM_20441 PF13520 Amino acid permease VPUCM_20442 PF01037 AsnC family VPUCM_20442 PF13404 AsnC-type helix-turn-helix domain VPUCM_20443 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_20443 PF03466 LysR substrate binding domain VPUCM_20444 PF01810 VPUCM_20444 VPUCM_20446 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VPUCM_20446 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VPUCM_20447 PF00072 Response regulator receiver domain VPUCM_20447 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_20447 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_20448 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VPUCM_20449 PF01554 MatE VPUCM_2045 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_20450 PF04363 VPUCM_20450 VPUCM_20453 PF04337 Protein of unknown function, DUF480 VPUCM_20454 PF01541 GIY-YIG catalytic domain VPUCM_20455 PF13407 Periplasmic binding protein domain VPUCM_20456 PF00072 Response regulator receiver domain VPUCM_20456 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_20456 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_20456 PF09308 LuxQ, periplasmic VPUCM_20457 PF01047 MarR family VPUCM_20458 PF16576 VPUCM_20458 VPUCM_20459 PF11168 VPUCM_20459 VPUCM_2046 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_2046 PF12911 VPUCM_2046 VPUCM_20460 PF07238 PilZ domain VPUCM_20460 PF12945 Flagellar protein YcgR VPUCM_20461 PF00892 EamA-like transporter family VPUCM_20462 PF01037 AsnC family VPUCM_20462 PF13412 Winged helix-turn-helix DNA-binding VPUCM_20463 PF13649 Methyltransferase domain VPUCM_20465 PF08239 Bacterial SH3 domain VPUCM_20467 PF02355 Protein export membrane protein VPUCM_20467 PF07549 SecD/SecF GG Motif VPUCM_20467 PF13721 SecD export protein N-terminal TM region VPUCM_20468 PF02355 Protein export membrane protein VPUCM_20468 PF07549 SecD/SecF GG Motif VPUCM_2047 PF00005 ABC transporter VPUCM_2047 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VPUCM_20470 PF01810 VPUCM_20470 VPUCM_20471 PF13561 Enoyl-(Acyl carrier protein) reductase VPUCM_20472 PF00108 Thiolase, N-terminal domain VPUCM_20472 PF02803 Thiolase, C-terminal domain VPUCM_20473 PF09361 VPUCM_20473 VPUCM_20474 PF07167 VPUCM_20474 VPUCM_20475 PF09574 VPUCM_20475 VPUCM_20476 PF03264 NapC/NirT cytochrome c family, N-terminal region VPUCM_20477 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) VPUCM_20478 PF00384 Molybdopterin oxidoreductase VPUCM_20478 PF01568 Molydopterin dinucleotide binding domain VPUCM_20478 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VPUCM_20479 PF03927 NapD protein VPUCM_2048 PF00005 ABC transporter VPUCM_20480 PF12838 4Fe-4S dicluster domain VPUCM_20481 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_20481 PF07730 Histidine kinase VPUCM_20481 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term VPUCM_20482 PF00072 Response regulator receiver domain VPUCM_20482 PF00196 Bacterial regulatory proteins, luxR family VPUCM_20485 PF01546 Peptidase family M20/M25/M40 VPUCM_20485 PF07687 Peptidase dimerisation domain VPUCM_20486 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VPUCM_20487 PF16576 VPUCM_20487 VPUCM_20488 PF00873 AcrB/AcrD/AcrF family VPUCM_20489 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VPUCM_2049 PF11042 VPUCM_2049 VPUCM_20490 PF00472 RF-1 domain VPUCM_20491 PF13419 Haloacid dehalogenase-like hydrolase VPUCM_20492 PF00691 OmpA family VPUCM_20492 PF13505 Outer membrane protein beta-barrel domain VPUCM_20493 PF00793 DAHP synthetase I family VPUCM_20494 PF07690 Major Facilitator Superfamily VPUCM_20495 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VPUCM_20495 PF08447 PAS fold VPUCM_20496 PF00456 Transketolase, thiamine diphosphate binding domain VPUCM_20496 PF02779 Transketolase, pyrimidine binding domain VPUCM_20496 PF02780 Transketolase, C-terminal domain VPUCM_20497 PF00923 Transaldolase VPUCM_2050 PF01368 DHH family VPUCM_2050 PF02833 DHHA2 domain VPUCM_20500 PF04198 Putative sugar-binding domain VPUCM_20501 PF00704 Glycosyl hydrolases family 18 VPUCM_20502 PF00563 EAL domain VPUCM_20502 PF00990 GGDEF domain VPUCM_20502 PF02743 Cache domain VPUCM_20503 PF00581 Rhodanese-like domain VPUCM_20505 PF16130 VPUCM_20505 VPUCM_20506 PF00899 ThiF family VPUCM_20507 PF00994 Probable molybdopterin binding domain VPUCM_20507 PF03453 MoeA N-terminal region (domain I and II) VPUCM_20507 PF03454 MoeA C-terminal region (domain IV) VPUCM_20508 PF01227 GTP cyclohydrolase I VPUCM_20509 PF01566 VPUCM_20509 VPUCM_2051 PF11449 VPUCM_2051 VPUCM_20510 PF03595 Voltage-dependent anion channel VPUCM_20512 PF00654 Voltage gated chloride channel VPUCM_20515 PF00248 Aldo/keto reductase family VPUCM_20516 PF00072 Response regulator receiver domain VPUCM_20517 PF00989 PAS fold VPUCM_20518 PF01256 Carbohydrate kinase VPUCM_20518 PF03853 YjeF-related protein N-terminus VPUCM_20519 PF00478 IMP dehydrogenase / GMP reductase domain VPUCM_2052 PF02065 Melibiase VPUCM_20520 PF00501 AMP-binding enzyme VPUCM_20521 PF00766 Electron transfer flavoprotein FAD-binding domain VPUCM_20521 PF01012 Electron transfer flavoprotein domain VPUCM_20522 PF01012 Electron transfer flavoprotein domain VPUCM_20523 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase VPUCM_20523 PF13450 NAD(P)-binding Rossmann-like domain VPUCM_20525 PF00005 ABC transporter VPUCM_20525 PF12399 Branched-chain amino acid ATP-binding cassette transporter VPUCM_20526 PF00501 AMP-binding enzyme VPUCM_20527 PF02653 VPUCM_20527 VPUCM_20528 PF02653 VPUCM_20528 VPUCM_20529 PF13458 Periplasmic binding protein VPUCM_2053 PF00384 Molybdopterin oxidoreductase VPUCM_2053 PF01568 Molydopterin dinucleotide binding domain VPUCM_20530 PF00005 ABC transporter VPUCM_20531 PF00501 AMP-binding enzyme VPUCM_20532 PF05724 Thiopurine S-methyltransferase (TPMT) VPUCM_20534 PF00034 Cytochrome c VPUCM_20535 PF00174 Oxidoreductase molybdopterin binding domain VPUCM_20535 PF03404 Mo-co oxidoreductase dimerisation domain VPUCM_20536 PF13411 MerR HTH family regulatory protein VPUCM_20537 PF02627 Carboxymuconolactone decarboxylase family VPUCM_20538 PF02567 Phenazine biosynthesis-like protein VPUCM_20539 PF10617 VPUCM_20539 VPUCM_2054 PF03264 NapC/NirT cytochrome c family, N-terminal region VPUCM_20540 PF02322 VPUCM_20540 VPUCM_20541 PF01654 VPUCM_20541 VPUCM_20542 PF00155 Aminotransferase class I and II VPUCM_20542 PF00392 Bacterial regulatory proteins, gntR family VPUCM_20543 PF12464 Maltose acetyltransferase VPUCM_20543 PF14602 Hexapeptide repeat of succinyl-transferase VPUCM_20545 PF00924 Mechanosensitive ion channel VPUCM_20546 PF08895 VPUCM_20546 VPUCM_20547 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein VPUCM_20548 PF00072 Response regulator receiver domain VPUCM_20548 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_20548 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_20548 PF13426 PAS domain VPUCM_20549 PF00682 HMGL-like VPUCM_2055 PF06796 VPUCM_2055 VPUCM_20550 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain VPUCM_20550 PF00364 Biotin-requiring enzyme VPUCM_20550 PF02785 Biotin carboxylase C-terminal domain VPUCM_20550 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VPUCM_20551 PF00378 Enoyl-CoA hydratase/isomerase family VPUCM_20552 PF01039 Carboxyl transferase domain VPUCM_20553 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VPUCM_20553 PF02770 Acyl-CoA dehydrogenase, middle domain VPUCM_20553 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VPUCM_20554 PF00376 MerR family regulatory protein VPUCM_20554 PF09278 MerR, DNA binding VPUCM_20555 PF00108 Thiolase, N-terminal domain VPUCM_20555 PF02803 Thiolase, C-terminal domain VPUCM_20556 PF00171 Aldehyde dehydrogenase family VPUCM_20557 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VPUCM_20557 PF02770 Acyl-CoA dehydrogenase, middle domain VPUCM_20557 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VPUCM_20558 PF00378 Enoyl-CoA hydratase/isomerase family VPUCM_20559 PF16113 VPUCM_20559 VPUCM_2056 PF03649 VPUCM_2056 VPUCM_20560 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VPUCM_20560 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VPUCM_20561 PF13561 Enoyl-(Acyl carrier protein) reductase VPUCM_20562 PF00990 GGDEF domain VPUCM_20563 PF00440 Bacterial regulatory proteins, tetR family VPUCM_20563 PF13977 Bacterial transcriptional repressor VPUCM_20564 PF00171 Aldehyde dehydrogenase family VPUCM_20565 PF00732 GMC oxidoreductase VPUCM_20565 PF05199 GMC oxidoreductase VPUCM_20566 PF04069 Substrate binding domain of ABC-type glycine betaine transport system VPUCM_20567 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_20568 PF00005 ABC transporter VPUCM_20569 PF00881 Nitroreductase family VPUCM_20571 PF01145 SPFH domain / Band 7 family VPUCM_20572 PF01957 NfeD-like C-terminal, partner-binding VPUCM_20574 PF00563 EAL domain VPUCM_20574 PF00990 GGDEF domain VPUCM_20574 PF05228 VPUCM_20574 VPUCM_20574 PF13426 PAS domain VPUCM_20575 PF00034 Cytochrome c VPUCM_20575 PF03150 Di-haem cytochrome c peroxidase VPUCM_20576 PF00072 Response regulator receiver domain VPUCM_20576 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_20576 PF01627 Hpt domain VPUCM_20576 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_20577 PF02566 OsmC-like protein VPUCM_20578 PF10974 VPUCM_20578 VPUCM_20579 PF04116 VPUCM_20579 VPUCM_2058 PF01226 Formate/nitrite transporter VPUCM_20581 PF13590 Domain of unknown function (DUF4136) VPUCM_20583 PF09335 VPUCM_20583 VPUCM_20587 PF13645 VPUCM_20587 VPUCM_20588 PF01048 Phosphorylase superfamily VPUCM_20589 PF00563 EAL domain VPUCM_20589 PF00990 GGDEF domain VPUCM_2059 PF06146 VPUCM_2059 VPUCM_20590 PF05025 RbsD / FucU transport protein family VPUCM_20591 PF00005 ABC transporter VPUCM_20592 PF02653 VPUCM_20592 VPUCM_20593 PF13407 Periplasmic binding protein domain VPUCM_20594 PF00294 pfkB family carbohydrate kinase VPUCM_20595 PF00356 Bacterial regulatory proteins, lacI family VPUCM_20595 PF13377 Periplasmic binding protein-like domain VPUCM_20597 PF01610 VPUCM_20597 VPUCM_20597 PF13542 VPUCM_20597 VPUCM_20599 PF04973 VPUCM_20599 VPUCM_2060 PF05232 VPUCM_2060 VPUCM_20600 PF01048 Phosphorylase superfamily VPUCM_20601 PF00027 Cyclic nucleotide-binding domain VPUCM_20603 PF01497 Periplasmic binding protein VPUCM_20604 PF01032 FecCD transport family VPUCM_20605 PF01032 FecCD transport family VPUCM_20606 PF00005 ABC transporter VPUCM_20607 PF13411 MerR HTH family regulatory protein VPUCM_20609 PF12833 Helix-turn-helix domain VPUCM_2061 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_2061 PF03466 LysR substrate binding domain VPUCM_20610 PF00593 TonB dependent receptor VPUCM_20610 PF07715 TonB-dependent Receptor Plug Domain VPUCM_20611 PF09981 Uncharacterized protein conserved in bacteria (DUF2218) VPUCM_20612 PF10688 VPUCM_20612 VPUCM_20617 PF12805 VPUCM_20617 VPUCM_20617 PF13515 VPUCM_20617 VPUCM_20618 PF00580 UvrD/REP helicase N-terminal domain VPUCM_20618 PF12462 VPUCM_20618 VPUCM_20618 PF13361 UvrD-like helicase C-terminal domain VPUCM_20619 PF02142 MGS-like domain VPUCM_2062 PF13460 NADH(P)-binding VPUCM_20620 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VPUCM_20621 PF00072 Response regulator receiver domain VPUCM_20621 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_20621 PF01627 Hpt domain VPUCM_20621 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_20623 PF06934 VPUCM_20623 VPUCM_20624 PF00486 Transcriptional regulatory protein, C terminal VPUCM_20625 PF00884 Sulfatase VPUCM_20626 PF00884 Sulfatase VPUCM_20626 PF14707 C-terminal region of aryl-sulfatase VPUCM_20627 PF13414 TPR repeat VPUCM_20627 PF13432 Tetratricopeptide repeat VPUCM_20627 PF13435 Cytochrome c554 and c-prime VPUCM_20628 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_20628 PF03466 LysR substrate binding domain VPUCM_20629 PF00884 Sulfatase VPUCM_20629 PF14707 C-terminal region of aryl-sulfatase VPUCM_2063 PF02698 DUF218 domain VPUCM_20630 PF04055 Radical SAM superfamily VPUCM_20630 PF13186 Iron-sulfur cluster-binding domain VPUCM_20630 PF13353 4Fe-4S single cluster domain VPUCM_20631 PF07726 ATPase family associated with various cellular activities (AAA) VPUCM_20632 PF01882 VPUCM_20632 VPUCM_20633 PF14316 VPUCM_20633 VPUCM_20634 PF00092 von Willebrand factor type A domain VPUCM_20635 PF13519 von Willebrand factor type A domain VPUCM_20636 PF13584 VPUCM_20636 VPUCM_20637 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VPUCM_20638 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_20638 PF03466 LysR substrate binding domain VPUCM_20639 PF00781 Diacylglycerol kinase catalytic domain VPUCM_2064 PF01717 Cobalamin-independent synthase, Catalytic domain VPUCM_20640 PF04076 Bacterial OB fold (BOF) protein VPUCM_20641 PF13505 Outer membrane protein beta-barrel domain VPUCM_20642 PF12710 haloacid dehalogenase-like hydrolase VPUCM_20643 PF04055 Radical SAM superfamily VPUCM_20643 PF13186 Iron-sulfur cluster-binding domain VPUCM_20644 PF14559 Tetratricopeptide repeat VPUCM_20645 PF08774 VRR-NUC domain VPUCM_20646 PF07690 Major Facilitator Superfamily VPUCM_20648 PF01435 Peptidase family M48 VPUCM_20649 PF04011 LemA family VPUCM_2065 PF08908 VPUCM_2065 VPUCM_20650 PF03606 VPUCM_20650 VPUCM_20651 PF00487 VPUCM_20651 VPUCM_20652 PF00583 Acetyltransferase (GNAT) family VPUCM_20653 PF03372 Endonuclease/Exonuclease/phosphatase family VPUCM_20654 PF01447 Thermolysin metallopeptidase, catalytic domain VPUCM_20654 PF02868 Thermolysin metallopeptidase, alpha-helical domain VPUCM_20654 PF03413 Peptidase propeptide and YPEB domain VPUCM_20654 PF04151 Bacterial pre-peptidase C-terminal domain VPUCM_20654 PF07504 Fungalysin/Thermolysin Propeptide Motif VPUCM_20655 PF00893 Small Multidrug Resistance protein VPUCM_20656 PF00892 EamA-like transporter family VPUCM_20657 PF00293 NUDIX domain VPUCM_20658 PF00583 Acetyltransferase (GNAT) family VPUCM_20659 PF13302 Acetyltransferase (GNAT) domain VPUCM_2066 PF01965 DJ-1/PfpI family VPUCM_2066 PF12833 Helix-turn-helix domain VPUCM_20660 PF00171 Aldehyde dehydrogenase family VPUCM_20661 PF00939 Sodium:sulfate symporter transmembrane region VPUCM_20663 PF14501 GHKL domain VPUCM_20663 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain VPUCM_20663 PF17203 VPUCM_20663 VPUCM_20664 PF00072 Response regulator receiver domain VPUCM_20665 PF04073 Aminoacyl-tRNA editing domain VPUCM_20666 PF01645 Conserved region in glutamate synthase VPUCM_20666 PF09360 Iron-binding zinc finger CDGSH type VPUCM_20668 PF00141 Peroxidase VPUCM_2067 PF00857 Isochorismatase family VPUCM_20670 PF09722 VPUCM_20670 VPUCM_20671 PF08808 VPUCM_20671 VPUCM_20672 PF01757 VPUCM_20672 VPUCM_20673 PF03206 VPUCM_20673 VPUCM_20674 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VPUCM_20675 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VPUCM_20676 PF03061 Thioesterase superfamily VPUCM_20677 PF03819 MazG nucleotide pyrophosphohydrolase domain VPUCM_20678 PF00582 Universal stress protein family VPUCM_20679 PF01769 Divalent cation transporter VPUCM_20679 PF03448 MgtE intracellular N domain VPUCM_2068 PF00005 ABC transporter VPUCM_20680 PF13521 AAA domain VPUCM_20681 PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) VPUCM_20682 PF11212 VPUCM_20682 VPUCM_20683 PF07119 VPUCM_20683 VPUCM_20685 PF01327 Polypeptide deformylase VPUCM_20686 PF13411 MerR HTH family regulatory protein VPUCM_20687 PF11158 VPUCM_20687 VPUCM_20689 PF02253 Phospholipase A1 VPUCM_2069 PF02687 VPUCM_2069 VPUCM_2069 PF12704 MacB-like periplasmic core domain VPUCM_20691 PF04307 VPUCM_20691 VPUCM_20693 PF00005 ABC transporter VPUCM_20693 PF00664 ABC transporter transmembrane region VPUCM_20695 PF00929 Exonuclease VPUCM_20696 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_20696 PF03466 LysR substrate binding domain VPUCM_20697 PF01039 Carboxyl transferase domain VPUCM_20698 PF15575 VPUCM_20698 VPUCM_2070 PF02687 VPUCM_2070 VPUCM_2070 PF12704 MacB-like periplasmic core domain VPUCM_20700 PF16691 VPUCM_20700 VPUCM_20701 PF14317 VPUCM_20701 VPUCM_20702 PF13175 AAA ATPase domain VPUCM_20704 PF02347 Glycine cleavage system P-protein VPUCM_20705 PF01597 Glycine cleavage H-protein VPUCM_20706 PF00464 Serine hydroxymethyltransferase VPUCM_20707 PF01381 Helix-turn-helix VPUCM_20707 PF07883 Cupin domain VPUCM_20708 PF01571 Aminomethyltransferase folate-binding domain VPUCM_20708 PF08669 Glycine cleavage T-protein C-terminal barrel domain VPUCM_20709 PF00440 Bacterial regulatory proteins, tetR family VPUCM_2071 PF02321 Outer membrane efflux protein VPUCM_20710 PF13437 HlyD family secretion protein VPUCM_20710 PF13533 Biotin-lipoyl like VPUCM_20711 PF13437 HlyD family secretion protein VPUCM_20711 PF13533 Biotin-lipoyl like VPUCM_20712 PF00873 AcrB/AcrD/AcrF family VPUCM_20713 PF13505 Outer membrane protein beta-barrel domain VPUCM_20714 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VPUCM_20715 PF00294 pfkB family carbohydrate kinase VPUCM_20716 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VPUCM_20716 PF00381 PTS HPr component phosphorylation site VPUCM_20717 PF00356 Bacterial regulatory proteins, lacI family VPUCM_20717 PF13407 Periplasmic binding protein domain VPUCM_20718 PF03372 Endonuclease/Exonuclease/phosphatase family VPUCM_2072 PF16576 VPUCM_2072 VPUCM_20720 PF13275 S4 domain VPUCM_20721 PF00563 EAL domain VPUCM_20722 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_20723 PF00497 Bacterial extracellular solute-binding proteins, family 3 VPUCM_20724 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_20725 PF00005 ABC transporter VPUCM_20726 PF00224 Pyruvate kinase, barrel domain VPUCM_20726 PF02887 Pyruvate kinase, alpha/beta domain VPUCM_20727 PF07690 Major Facilitator Superfamily VPUCM_20728 PF13343 Bacterial extracellular solute-binding protein VPUCM_20729 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_20729 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_2073 PF13302 Acetyltransferase (GNAT) domain VPUCM_20730 PF00072 Response regulator receiver domain VPUCM_20730 PF02954 Bacterial regulatory protein, Fis family VPUCM_20730 PF14532 Sigma-54 interaction domain VPUCM_20731 PF07947 VPUCM_20731 VPUCM_20732 PF00465 Iron-containing alcohol dehydrogenase VPUCM_20733 PF06719 VPUCM_20733 VPUCM_20733 PF12833 Helix-turn-helix domain VPUCM_20734 PF00704 Glycosyl hydrolases family 18 VPUCM_20734 PF06483 VPUCM_20734 VPUCM_20734 PF14600 Cellulose-binding domain VPUCM_20735 PF00483 Nucleotidyl transferase VPUCM_20736 PF01268 Formate--tetrahydrofolate ligase VPUCM_20737 PF00294 pfkB family carbohydrate kinase VPUCM_20738 PF05981 VPUCM_20738 VPUCM_2074 PF00583 Acetyltransferase (GNAT) family VPUCM_20740 PF01966 HD domain VPUCM_20741 PF13419 Haloacid dehalogenase-like hydrolase VPUCM_20743 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VPUCM_20745 PF04336 VPUCM_20745 VPUCM_20746 PF00270 DEAD/DEAH box helicase VPUCM_20746 PF00271 Helicase conserved C-terminal domain VPUCM_20747 PF00563 EAL domain VPUCM_20749 PF09932 VPUCM_20749 VPUCM_2075 PF13649 Methyltransferase domain VPUCM_20750 PF01292 Prokaryotic cytochrome b561 VPUCM_20751 PF04264 YceI-like domain VPUCM_20752 PF00571 CBS domain VPUCM_20752 PF01226 Formate/nitrite transporter VPUCM_20753 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_20753 PF03466 LysR substrate binding domain VPUCM_20754 PF06496 VPUCM_20754 VPUCM_20755 PF11398 Protein of unknown function (DUF2813) VPUCM_20756 PF00149 Calcineurin-like phosphoesterase VPUCM_20756 PF02872 5'-nucleotidase, C-terminal domain VPUCM_20758 PF03741 VPUCM_20758 VPUCM_2076 PF08242 Methyltransferase domain VPUCM_20760 PF03831 PhnA protein VPUCM_20760 PF08274 PhnA Zinc-Ribbon VPUCM_20761 PF12262 VPUCM_20761 VPUCM_20762 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VPUCM_20764 PF01435 Peptidase family M48 VPUCM_20765 PF03061 Thioesterase superfamily VPUCM_20766 PF11869 VPUCM_20766 VPUCM_20767 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VPUCM_20767 PF12793 VPUCM_20767 VPUCM_20769 PF03091 CutA1 divalent ion tolerance protein VPUCM_20770 PF09997 VPUCM_20770 VPUCM_20772 PF03171 2OG-Fe(II) oxygenase superfamily VPUCM_20772 PF14226 non-haem dioxygenase in morphine synthesis N-terminal VPUCM_20773 PF00226 DnaJ domain VPUCM_20773 PF12339 VPUCM_20773 VPUCM_20774 PF09818 Predicted ATPase of the ABC class VPUCM_20775 PF00563 EAL domain VPUCM_20775 PF00990 GGDEF domain VPUCM_20775 PF13185 GAF domain VPUCM_20776 PF07055 Enoyl reductase FAD binding domain VPUCM_20776 PF12241 Trans-2-enoyl-CoA reductase catalytic region VPUCM_20776 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase VPUCM_20777 PF13472 GDSL-like Lipase/Acylhydrolase family VPUCM_20778 PF00005 ABC transporter VPUCM_20779 PF02687 VPUCM_20779 VPUCM_2078 PF00085 Thioredoxin VPUCM_20780 PF01266 FAD dependent oxidoreductase VPUCM_20781 PF02626 Allophanate hydrolase subunit 2 VPUCM_20782 PF02682 Allophanate hydrolase subunit 1 VPUCM_20783 PF03746 LamB/YcsF family VPUCM_20784 PF00672 HAMP domain VPUCM_20784 PF00989 PAS fold VPUCM_20784 PF00990 GGDEF domain VPUCM_20784 PF13426 PAS domain VPUCM_20784 PF17152 VPUCM_20784 VPUCM_20785 PF16363 VPUCM_20785 VPUCM_20787 PF00593 TonB dependent receptor VPUCM_20787 PF07715 TonB-dependent Receptor Plug Domain VPUCM_20788 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_20788 PF03466 LysR substrate binding domain VPUCM_20789 PF00583 Acetyltransferase (GNAT) family VPUCM_20789 PF13380 CoA binding domain VPUCM_20789 PF13549 ATP-grasp domain VPUCM_20789 PF13607 Succinyl-CoA ligase like flavodoxin domain VPUCM_2079 PF02683 VPUCM_2079 VPUCM_2079 PF11412 Disulphide bond corrector protein DsbC VPUCM_2079 PF13899 Thioredoxin-like VPUCM_20790 PF05036 Sporulation related domain VPUCM_20791 PF01820 D-ala D-ala ligase N-terminus VPUCM_20791 PF07478 D-ala D-ala ligase C-terminus VPUCM_20792 PF11782 VPUCM_20792 VPUCM_20793 PF01253 Translation initiation factor SUI1 VPUCM_20795 PF05840 VPUCM_20795 VPUCM_20799 PF05371 Phage major coat protein, Gp8 VPUCM_20801 PF17537 VPUCM_20801 VPUCM_20802 PF05707 Zonular occludens toxin (Zot) VPUCM_20803 PF00263 VPUCM_20803 VPUCM_20803 PF03958 Bacterial type II/III secretion system short domain VPUCM_20804 PF10881 VPUCM_20804 VPUCM_20806 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_20806 PF03466 LysR substrate binding domain VPUCM_20808 PF00582 Universal stress protein family VPUCM_20809 PF03701 VPUCM_20809 VPUCM_2081 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_2081 PF03466 LysR substrate binding domain VPUCM_20810 PF13729 VPUCM_20810 VPUCM_20811 PF11060 VPUCM_20811 VPUCM_20812 PF00072 Response regulator receiver domain VPUCM_20812 PF00486 Transcriptional regulatory protein, C terminal VPUCM_20813 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_20813 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_20813 PF11884 Domain of unknown function (DUF3404) VPUCM_20814 PF02233 NAD(P) transhydrogenase beta subunit VPUCM_20815 PF01262 Alanine dehydrogenase/PNT, C-terminal domain VPUCM_20815 PF05222 Alanine dehydrogenase/PNT, N-terminal domain VPUCM_20815 PF12769 Domain of unknown function (DUF3814) VPUCM_20816 PF10115 VPUCM_20816 VPUCM_20817 PF10719 VPUCM_20817 VPUCM_20818 PF00990 GGDEF domain VPUCM_20819 PF11557 VPUCM_20819 VPUCM_2082 PF00072 Response regulator receiver domain VPUCM_2082 PF00196 Bacterial regulatory proteins, luxR family VPUCM_20820 PF00072 Response regulator receiver domain VPUCM_20820 PF00990 GGDEF domain VPUCM_20821 PF11269 Protein of unknown function (DUF3069) VPUCM_20822 PF00005 ABC transporter VPUCM_20822 PF03459 TOBE domain VPUCM_20823 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_20824 PF13531 Bacterial extracellular solute-binding protein VPUCM_20825 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VPUCM_20825 PF07685 CobB/CobQ-like glutamine amidotransferase domain VPUCM_20826 PF04076 Bacterial OB fold (BOF) protein VPUCM_20829 PF05618 Putative ATP-dependant zinc protease VPUCM_2083 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_2083 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_2083 PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein VPUCM_20830 PF00155 Aminotransferase class I and II VPUCM_20831 PF02311 AraC-like ligand binding domain VPUCM_20831 PF12833 Helix-turn-helix domain VPUCM_20833 PF01554 MatE VPUCM_20834 PF13353 4Fe-4S single cluster domain VPUCM_20835 PF03477 ATP cone domain VPUCM_20835 PF13597 Anaerobic ribonucleoside-triphosphate reductase VPUCM_20837 PF03372 Endonuclease/Exonuclease/phosphatase family VPUCM_20838 PF16576 VPUCM_20838 VPUCM_20839 PF00873 AcrB/AcrD/AcrF family VPUCM_2084 PF13247 4Fe-4S dicluster domain VPUCM_20841 PF04143 VPUCM_20841 VPUCM_20842 PF12840 Helix-turn-helix domain VPUCM_20843 PF11127 Protein of unknown function (DUF2892) VPUCM_20844 PF00581 Rhodanese-like domain VPUCM_20844 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VPUCM_20844 PF07992 Pyridine nucleotide-disulphide oxidoreductase VPUCM_20845 PF00384 Molybdopterin oxidoreductase VPUCM_20845 PF01568 Molydopterin dinucleotide binding domain VPUCM_20846 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_20846 PF03466 LysR substrate binding domain VPUCM_20847 PF02634 FdhD/NarQ family VPUCM_20848 PF07690 Major Facilitator Superfamily VPUCM_20849 PF00072 Response regulator receiver domain VPUCM_20849 PF00196 Bacterial regulatory proteins, luxR family VPUCM_2085 PF03916 VPUCM_2085 VPUCM_20850 PF05231 VPUCM_20850 VPUCM_20850 PF07730 Histidine kinase VPUCM_20851 PF07690 Major Facilitator Superfamily VPUCM_20852 PF01238 Phosphomannose isomerase type I VPUCM_20853 PF00368 Hydroxymethylglutaryl-coenzyme A reductase VPUCM_20854 PF08811 VPUCM_20854 VPUCM_20855 PF07394 VPUCM_20855 VPUCM_20856 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VPUCM_20856 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VPUCM_20857 PF00085 Thioredoxin VPUCM_20858 PF07690 Major Facilitator Superfamily VPUCM_20859 PF12833 Helix-turn-helix domain VPUCM_2086 PF00384 Molybdopterin oxidoreductase VPUCM_2086 PF01568 Molydopterin dinucleotide binding domain VPUCM_20860 PF01554 MatE VPUCM_20861 PF11756 VPUCM_20861 VPUCM_20862 PF13302 Acetyltransferase (GNAT) domain VPUCM_20863 PF11661 VPUCM_20863 VPUCM_20864 PF00593 TonB dependent receptor VPUCM_20864 PF07715 TonB-dependent Receptor Plug Domain VPUCM_20865 PF11575 VPUCM_20865 VPUCM_20866 PF03605 VPUCM_20866 VPUCM_20867 PF01936 NYN domain VPUCM_20868 PF13778 VPUCM_20868 VPUCM_20869 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VPUCM_20870 PF01226 Formate/nitrite transporter VPUCM_20871 PF13806 Rieske-like [2Fe-2S] domain VPUCM_20872 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VPUCM_20872 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VPUCM_20872 PF04324 BFD-like [2Fe-2S] binding domain VPUCM_20872 PF07992 Pyridine nucleotide-disulphide oxidoreductase VPUCM_20873 PF01272 Transcription elongation factor, GreA/GreB, C-term VPUCM_20873 PF14760 Rnk N-terminus VPUCM_20875 PF05548 VPUCM_20875 VPUCM_20875 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase VPUCM_20876 PF12358 VPUCM_20876 VPUCM_20877 PF10544 VPUCM_20877 VPUCM_20877 PF13250 VPUCM_20877 VPUCM_20879 PF05548 VPUCM_20879 VPUCM_20879 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase VPUCM_2088 PF00034 Cytochrome c VPUCM_20880 PF13462 Thioredoxin VPUCM_20881 PF05235 CHAD domain VPUCM_20882 PF01764 Lipase (class 3) VPUCM_20884 PF00128 Alpha amylase, catalytic domain VPUCM_20885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VPUCM_20885 PF12729 VPUCM_20885 VPUCM_20886 PF00842 Alanine racemase, C-terminal domain VPUCM_20886 PF01168 Alanine racemase, N-terminal domain VPUCM_20888 PF03591 VPUCM_20888 VPUCM_20889 PF05437 VPUCM_20889 VPUCM_2089 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VPUCM_20890 PF01565 FAD binding domain VPUCM_20890 PF09330 D-lactate dehydrogenase, membrane binding VPUCM_20891 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_20891 PF03466 LysR substrate binding domain VPUCM_20892 PF05762 VWA domain containing CoxE-like protein VPUCM_20893 PF07728 AAA domain (dynein-related subfamily) VPUCM_20893 PF12592 Protein of unknown function (DUF3763) VPUCM_20894 PF00293 NUDIX domain VPUCM_20895 PF01212 Beta-eliminating lyase VPUCM_20897 PF03606 VPUCM_20897 VPUCM_20898 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family VPUCM_20899 PF01569 PAP2 superfamily VPUCM_2090 PF04403 VPUCM_2090 VPUCM_20900 PF01124 MAPEG family VPUCM_20902 PF00892 EamA-like transporter family VPUCM_20903 PF01925 VPUCM_20903 VPUCM_20904 PF07963 Prokaryotic N-terminal methylation motif VPUCM_20905 PF00072 Response regulator receiver domain VPUCM_20905 PF01584 CheW-like domain VPUCM_20906 PF01627 Hpt domain VPUCM_20907 PF00072 Response regulator receiver domain VPUCM_20907 PF14559 Tetratricopeptide repeat VPUCM_20909 PF00072 Response regulator receiver domain VPUCM_20909 PF00196 Bacterial regulatory proteins, luxR family VPUCM_2091 PF02470 VPUCM_2091 VPUCM_20910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_20911 PF00990 GGDEF domain VPUCM_20912 PF00072 Response regulator receiver domain VPUCM_20912 PF00196 Bacterial regulatory proteins, luxR family VPUCM_20913 PF00072 Response regulator receiver domain VPUCM_20913 PF00563 EAL domain VPUCM_20914 PF00072 Response regulator receiver domain VPUCM_20914 PF00497 Bacterial extracellular solute-binding proteins, family 3 VPUCM_20914 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_20914 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_20915 PF06742 Protein of unknown function (DUF1214) VPUCM_20915 PF06863 Protein of unknown function (DUF1254) VPUCM_20916 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_20916 PF03466 LysR substrate binding domain VPUCM_20917 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_20918 PF01926 50S ribosome-binding GTPase VPUCM_20919 PF00155 Aminotransferase class I and II VPUCM_2092 PF03886 Protein of unknown function (DUF330) VPUCM_20920 PF00072 Response regulator receiver domain VPUCM_20920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_20922 PF13551 Winged helix-turn helix VPUCM_20923 PF13333 VPUCM_20923 VPUCM_20924 PF07690 Major Facilitator Superfamily VPUCM_20925 PF02311 AraC-like ligand binding domain VPUCM_20925 PF12833 Helix-turn-helix domain VPUCM_20926 PF08212 Lipocalin-like domain VPUCM_20927 PF00300 Histidine phosphatase superfamily (branch 1) VPUCM_20928 PF01202 Shikimate kinase VPUCM_20929 PF00031 Cystatin domain VPUCM_2093 PF13231 VPUCM_2093 VPUCM_20930 PF13476 AAA domain VPUCM_20930 PF13558 Putative exonuclease SbcCD, C subunit VPUCM_20931 PF00149 Calcineurin-like phosphoesterase VPUCM_20931 PF12320 Type 5 capsule protein repressor C-terminal domain VPUCM_20933 PF05954 Phage late control gene D protein (GPD) VPUCM_20934 PF05638 Protein of unknown function (DUF796) VPUCM_20935 PF00004 ATPase family associated with various cellular activities (AAA) VPUCM_20935 PF02861 Clp amino terminal domain VPUCM_20935 PF07724 AAA domain (Cdc48 subfamily) VPUCM_20935 PF10431 C-terminal, D2-small domain, of ClpB protein VPUCM_20936 PF06996 VPUCM_20936 VPUCM_20937 PF05947 VPUCM_20937 VPUCM_20938 PF04965 Gene 25-like lysozyme VPUCM_20939 PF07024 ImpE protein VPUCM_2094 PF09335 VPUCM_2094 VPUCM_20940 PF05943 VPUCM_20940 VPUCM_20941 PF05943 VPUCM_20941 VPUCM_20942 PF05591 VPUCM_20942 VPUCM_20943 PF06812 VPUCM_20943 VPUCM_20944 PF13672 Protein phosphatase 2C VPUCM_20945 PF09867 Uncharacterized protein conserved in bacteria (DUF2094) VPUCM_20946 PF06744 VPUCM_20946 VPUCM_20946 PF06761 VPUCM_20946 VPUCM_20946 PF14331 VPUCM_20946 VPUCM_20947 PF00691 OmpA family VPUCM_20947 PF09850 Uncharacterized protein conserved in bacteria (DUF2077) VPUCM_20948 PF05936 VPUCM_20948 VPUCM_20949 PF12790 Type VI secretion lipoprotein VPUCM_2095 PF00535 Glycosyl transferase family 2 VPUCM_20950 PF00498 FHA domain VPUCM_20951 PF00069 Protein kinase domain VPUCM_20952 PF00072 Response regulator receiver domain VPUCM_20955 PF13581 Histidine kinase-like ATPase domain VPUCM_20956 PF00072 Response regulator receiver domain VPUCM_20956 PF07228 Stage II sporulation protein E (SpoIIE) VPUCM_20958 PF00043 Glutathione S-transferase, C-terminal domain VPUCM_20958 PF13417 Glutathione S-transferase, N-terminal domain VPUCM_20959 PF00440 Bacterial regulatory proteins, tetR family VPUCM_2096 PF16363 VPUCM_2096 VPUCM_20960 PF03479 Domain of unknown function (DUF296) VPUCM_20961 PF13806 Rieske-like [2Fe-2S] domain VPUCM_20962 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VPUCM_20962 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VPUCM_20962 PF04324 BFD-like [2Fe-2S] binding domain VPUCM_20962 PF07992 Pyridine nucleotide-disulphide oxidoreductase VPUCM_20963 PF00005 ABC transporter VPUCM_20964 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_20965 PF13379 NMT1-like family VPUCM_20967 PF03861 ANTAR domain VPUCM_20968 PF01738 Dienelactone hydrolase family VPUCM_20969 PF00591 Glycosyl transferase family, a/b domain VPUCM_20969 PF02885 Glycosyl transferase family, helical bundle domain VPUCM_20970 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VPUCM_20971 PF00384 Molybdopterin oxidoreductase VPUCM_20971 PF01568 Molydopterin dinucleotide binding domain VPUCM_20971 PF04324 BFD-like [2Fe-2S] binding domain VPUCM_20972 PF00583 Acetyltransferase (GNAT) family VPUCM_20974 PF03222 Tryptophan/tyrosine permease family VPUCM_20975 PF00990 GGDEF domain VPUCM_20975 PF13424 Tetratricopeptide repeat VPUCM_20977 PF00082 Subtilase family VPUCM_20977 PF01483 Proprotein convertase P-domain VPUCM_20979 PF00245 Alkaline phosphatase VPUCM_2098 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VPUCM_20980 PF06445 GyrI-like small molecule binding domain VPUCM_20980 PF10604 Polyketide cyclase / dehydrase and lipid transport VPUCM_20981 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_20982 PF00072 Response regulator receiver domain VPUCM_20982 PF00486 Transcriptional regulatory protein, C terminal VPUCM_20987 PF04314 Protein of unknown function (DUF461) VPUCM_20988 PF00012 Hsp70 protein VPUCM_2099 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family VPUCM_20990 PF08883 Dopa 4,5-dioxygenase family VPUCM_20991 PF00676 Dehydrogenase E1 component VPUCM_20992 PF02779 Transketolase, pyrimidine binding domain VPUCM_20992 PF02780 Transketolase, C-terminal domain VPUCM_20993 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VPUCM_20993 PF00364 Biotin-requiring enzyme VPUCM_20993 PF02817 e3 binding domain VPUCM_20994 PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase VPUCM_20994 PF13450 NAD(P)-binding Rossmann-like domain VPUCM_20995 PF13417 Glutathione S-transferase, N-terminal domain VPUCM_20996 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_20996 PF03466 LysR substrate binding domain VPUCM_20997 PF00775 Dioxygenase VPUCM_20999 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_2100 PF13176 Tetratricopeptide repeat VPUCM_2100 PF14559 Tetratricopeptide repeat VPUCM_21000 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_21001 PF00497 Bacterial extracellular solute-binding proteins, family 3 VPUCM_21002 PF00005 ABC transporter VPUCM_21004 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_21004 PF03466 LysR substrate binding domain VPUCM_21005 PF06863 Protein of unknown function (DUF1254) VPUCM_21006 PF06742 Protein of unknown function (DUF1214) VPUCM_21006 PF06863 Protein of unknown function (DUF1254) VPUCM_21007 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_21007 PF03466 LysR substrate binding domain VPUCM_21008 PF01565 FAD binding domain VPUCM_21008 PF08031 Berberine and berberine like VPUCM_2101 PF06305 VPUCM_2101 VPUCM_21010 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VPUCM_21011 PF01040 UbiA prenyltransferase family VPUCM_21012 PF03626 VPUCM_21012 VPUCM_21013 PF00510 Cytochrome c oxidase subunit III VPUCM_21014 PF00115 Cytochrome C and Quinol oxidase polypeptide I VPUCM_21015 PF00116 Cytochrome C oxidase subunit II, periplasmic domain VPUCM_21015 PF06481 COX Aromatic Rich Motif VPUCM_21016 PF13561 Enoyl-(Acyl carrier protein) reductase VPUCM_21017 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VPUCM_21017 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VPUCM_21018 PF16113 VPUCM_21018 VPUCM_21019 PF00378 Enoyl-CoA hydratase/isomerase family VPUCM_2102 PF00216 Bacterial DNA-binding protein VPUCM_21020 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VPUCM_21020 PF02770 Acyl-CoA dehydrogenase, middle domain VPUCM_21020 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VPUCM_21021 PF00171 Aldehyde dehydrogenase family VPUCM_21022 PF00108 Thiolase, N-terminal domain VPUCM_21022 PF02803 Thiolase, C-terminal domain VPUCM_21023 PF13411 MerR HTH family regulatory protein VPUCM_21024 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VPUCM_21024 PF02770 Acyl-CoA dehydrogenase, middle domain VPUCM_21024 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VPUCM_21026 PF01039 Carboxyl transferase domain VPUCM_21027 PF00378 Enoyl-CoA hydratase/isomerase family VPUCM_21028 PF00682 HMGL-like VPUCM_21029 PF10063 VPUCM_21029 VPUCM_2103 PF00575 S1 RNA binding domain VPUCM_21030 PF00892 EamA-like transporter family VPUCM_21031 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VPUCM_21031 PF08447 PAS fold VPUCM_21031 PF13426 PAS domain VPUCM_21032 PF00871 Acetokinase family VPUCM_21034 PF00563 EAL domain VPUCM_21034 PF00990 GGDEF domain VPUCM_21035 PF00270 DEAD/DEAH box helicase VPUCM_21035 PF00271 Helicase conserved C-terminal domain VPUCM_21035 PF03880 DbpA RNA binding domain VPUCM_21036 PF00575 S1 RNA binding domain VPUCM_21036 PF00773 RNB domain VPUCM_21036 PF08206 Ribonuclease B OB domain VPUCM_21037 PF12833 Helix-turn-helix domain VPUCM_21038 PF11225 VPUCM_21038 VPUCM_2104 PF02224 Cytidylate kinase VPUCM_21040 PF12727 PBP superfamily domain VPUCM_21041 PF01575 MaoC like domain VPUCM_21042 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_21042 PF03466 LysR substrate binding domain VPUCM_21043 PF04055 Radical SAM superfamily VPUCM_21043 PF13186 Iron-sulfur cluster-binding domain VPUCM_21044 PF00884 Sulfatase VPUCM_21045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_21045 PF03466 LysR substrate binding domain VPUCM_21047 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VPUCM_21047 PF08447 PAS fold VPUCM_21048 PF00005 ABC transporter VPUCM_21049 PF00563 EAL domain VPUCM_21049 PF12792 VPUCM_21049 VPUCM_2105 PF01343 Peptidase family S49 VPUCM_2105 PF08496 VPUCM_2105 VPUCM_21050 PF01614 Bacterial transcriptional regulator VPUCM_21050 PF08279 HTH domain VPUCM_21051 PF00491 Arginase family VPUCM_21053 PF00270 DEAD/DEAH box helicase VPUCM_21053 PF00271 Helicase conserved C-terminal domain VPUCM_21054 PF02492 CobW/HypB/UreG, nucleotide-binding domain VPUCM_21056 PF01470 Pyroglutamyl peptidase VPUCM_21058 PF00291 Pyridoxal-phosphate dependent enzyme VPUCM_21059 PF09905 Uncharacterized conserved protein (DUF2132) VPUCM_2106 PF00106 short chain dehydrogenase VPUCM_21060 PF00270 DEAD/DEAH box helicase VPUCM_21060 PF00271 Helicase conserved C-terminal domain VPUCM_21061 PF12843 VPUCM_21061 VPUCM_21062 PF14375 VPUCM_21062 VPUCM_21063 PF08888 HopJ type III effector protein VPUCM_21065 PF01329 Pterin 4 alpha carbinolamine dehydratase VPUCM_21066 PF00351 Biopterin-dependent aromatic amino acid hydroxylase VPUCM_21067 PF00501 AMP-binding enzyme VPUCM_21068 PF13489 Methyltransferase domain VPUCM_21069 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_21069 PF03466 LysR substrate binding domain VPUCM_2107 PF00154 recA bacterial DNA recombination protein VPUCM_21070 PF01545 Cation efflux family VPUCM_21074 PF00892 EamA-like transporter family VPUCM_21077 PF00465 Iron-containing alcohol dehydrogenase VPUCM_21078 PF07995 Glucose / Sorbosone dehydrogenase VPUCM_21079 PF13419 Haloacid dehalogenase-like hydrolase VPUCM_2108 PF00817 impB/mucB/samB family VPUCM_21080 PF00210 Ferritin-like domain VPUCM_21081 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VPUCM_21081 PF00672 HAMP domain VPUCM_21081 PF12729 VPUCM_21081 VPUCM_21084 PF00005 ABC transporter VPUCM_21085 PF02687 VPUCM_21085 VPUCM_21085 PF12704 MacB-like periplasmic core domain VPUCM_21086 PF02687 VPUCM_21086 VPUCM_21086 PF12704 MacB-like periplasmic core domain VPUCM_21087 PF17131 VPUCM_21087 VPUCM_21088 PF00497 Bacterial extracellular solute-binding proteins, family 3 VPUCM_21088 PF00990 GGDEF domain VPUCM_21089 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VPUCM_21089 PF08447 PAS fold VPUCM_21089 PF13426 PAS domain VPUCM_2109 PF01336 OB-fold nucleic acid binding domain VPUCM_2109 PF02811 PHP domain VPUCM_2109 PF07733 Bacterial DNA polymerase III alpha subunit VPUCM_2109 PF14579 Helix-hairpin-helix motif VPUCM_21090 PF00313 'Cold-shock' DNA-binding domain VPUCM_21091 PF07152 YaeQ protein VPUCM_21093 PF00462 Glutaredoxin VPUCM_21094 PF00691 OmpA family VPUCM_21095 PF13462 Thioredoxin VPUCM_21096 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VPUCM_21096 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VPUCM_21097 PF01040 UbiA prenyltransferase family VPUCM_21098 PF02628 VPUCM_21098 VPUCM_2110 PF00072 Response regulator receiver domain VPUCM_2110 PF01584 CheW-like domain VPUCM_21100 PF02104 VPUCM_21100 VPUCM_21102 PF11137 VPUCM_21102 VPUCM_21103 PF00510 Cytochrome c oxidase subunit III VPUCM_21104 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 VPUCM_21105 PF00115 Cytochrome C and Quinol oxidase polypeptide I VPUCM_21106 PF00116 Cytochrome C oxidase subunit II, periplasmic domain VPUCM_21106 PF02790 Cytochrome C oxidase subunit II, transmembrane domain VPUCM_21106 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VPUCM_21107 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VPUCM_21107 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VPUCM_21107 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VPUCM_21107 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VPUCM_21108 PF00583 Acetyltransferase (GNAT) family VPUCM_21109 PF01810 VPUCM_21109 VPUCM_2111 PF00480 ROK family VPUCM_21110 PF02311 AraC-like ligand binding domain VPUCM_21110 PF12833 Helix-turn-helix domain VPUCM_21111 PF03591 VPUCM_21111 VPUCM_21112 PF05437 VPUCM_21112 VPUCM_21113 PF01557 Fumarylacetoacetate (FAA) hydrolase family VPUCM_21114 PF13609 Gram-negative porin VPUCM_21115 PF13609 Gram-negative porin VPUCM_21116 PF00892 EamA-like transporter family VPUCM_21117 PF00462 Glutaredoxin VPUCM_2112 PF00224 Pyruvate kinase, barrel domain VPUCM_2112 PF02887 Pyruvate kinase, alpha/beta domain VPUCM_21120 PF07690 Major Facilitator Superfamily VPUCM_21121 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_21121 PF03466 LysR substrate binding domain VPUCM_21122 PF00563 EAL domain VPUCM_21122 PF00990 GGDEF domain VPUCM_21123 PF01551 Peptidase family M23 VPUCM_21123 PF04225 Opacity-associated protein A LysM-like domain VPUCM_21125 PF04828 Glutathione-dependent formaldehyde-activating enzyme VPUCM_21126 PF06912 VPUCM_21126 VPUCM_21127 PF07670 Nucleoside recognition VPUCM_21128 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VPUCM_21128 PF00672 HAMP domain VPUCM_21128 PF02743 Cache domain VPUCM_2113 PF01734 Patatin-like phospholipase VPUCM_21130 PF03222 Tryptophan/tyrosine permease family VPUCM_21132 PF13560 Helix-turn-helix domain VPUCM_21135 PF00485 Phosphoribulokinase / Uridine kinase family VPUCM_21136 PF05068 Mannitol repressor VPUCM_21137 PF00107 Zinc-binding dehydrogenase VPUCM_21137 PF08240 Alcohol dehydrogenase GroES-like domain VPUCM_21138 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VPUCM_21138 PF02378 Phosphotransferase system, EIIC VPUCM_21139 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VPUCM_2114 PF13505 Outer membrane protein beta-barrel domain VPUCM_21140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VPUCM_21140 PF12793 VPUCM_21140 VPUCM_21141 PF01022 Bacterial regulatory protein, arsR family VPUCM_21142 PF01758 Sodium Bile acid symporter family VPUCM_21143 PF12833 Helix-turn-helix domain VPUCM_21144 PF01161 Phosphatidylethanolamine-binding protein VPUCM_21145 PF02567 Phenazine biosynthesis-like protein VPUCM_21146 PF10282 Lactonase, 7-bladed beta-propeller VPUCM_21148 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VPUCM_21148 PF12729 VPUCM_21148 VPUCM_2115 PF00209 Sodium:neurotransmitter symporter family VPUCM_21150 PF13437 HlyD family secretion protein VPUCM_21151 PF00005 ABC transporter VPUCM_21152 PF12698 ABC-2 family transporter protein VPUCM_21154 PF03372 Endonuclease/Exonuclease/phosphatase family VPUCM_21155 PF00037 4Fe-4S binding domain VPUCM_21155 PF00384 Molybdopterin oxidoreductase VPUCM_21155 PF01568 Molydopterin dinucleotide binding domain VPUCM_21155 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VPUCM_21155 PF07992 Pyridine nucleotide-disulphide oxidoreductase VPUCM_21155 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VPUCM_21157 PF02321 Outer membrane efflux protein VPUCM_21158 PF11604 Copper binding periplasmic protein CusF VPUCM_21158 PF16576 VPUCM_21158 VPUCM_21159 PF00873 AcrB/AcrD/AcrF family VPUCM_21161 PF00175 Oxidoreductase NAD-binding domain VPUCM_21161 PF01794 VPUCM_21161 VPUCM_21161 PF08022 VPUCM_21161 VPUCM_21162 PF13354 Beta-lactamase enzyme family VPUCM_21163 PF00990 GGDEF domain VPUCM_21163 PF01590 GAF domain VPUCM_21165 PF13302 Acetyltransferase (GNAT) domain VPUCM_21167 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VPUCM_21168 PF00873 AcrB/AcrD/AcrF family VPUCM_21169 PF13437 HlyD family secretion protein VPUCM_21169 PF13533 Biotin-lipoyl like VPUCM_2117 PF00367 phosphotransferase system, EIIB VPUCM_2117 PF02378 Phosphotransferase system, EIIC VPUCM_21171 PF00326 Prolyl oligopeptidase family VPUCM_21171 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain VPUCM_21172 PF00005 ABC transporter VPUCM_21173 PF00582 Universal stress protein family VPUCM_21174 PF02525 Flavodoxin-like fold VPUCM_21175 PF00999 Sodium/hydrogen exchanger family VPUCM_21175 PF02254 TrkA-N domain VPUCM_21177 PF12840 Helix-turn-helix domain VPUCM_21178 PF00128 Alpha amylase, catalytic domain VPUCM_21179 PF09016 Pas factor saposin fold VPUCM_2118 PF01026 TatD related DNase VPUCM_21180 PF01752 Collagenase VPUCM_21180 PF04151 Bacterial pre-peptidase C-terminal domain VPUCM_21180 PF08453 Peptidase family M9 N-terminal VPUCM_21184 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_21184 PF03466 LysR substrate binding domain VPUCM_21186 PF00210 Ferritin-like domain VPUCM_21187 PF00141 Peroxidase VPUCM_21188 PF01292 Prokaryotic cytochrome b561 VPUCM_2119 PF09115 DNA polymerase III, delta subunit, C terminal VPUCM_2119 PF13177 DNA polymerase III, delta subunit VPUCM_21191 PF00082 Subtilase family VPUCM_21195 PF00682 HMGL-like VPUCM_21195 PF08502 LeuA allosteric (dimerisation) domain VPUCM_21196 PF07883 Cupin domain VPUCM_21196 PF12833 Helix-turn-helix domain VPUCM_21197 PF07690 Major Facilitator Superfamily VPUCM_21198 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_21198 PF03466 LysR substrate binding domain VPUCM_21199 PF11840 VPUCM_21199 VPUCM_2120 PF02223 Thymidylate kinase VPUCM_21200 PF13616 PPIC-type PPIASE domain VPUCM_21202 PF00072 Response regulator receiver domain VPUCM_21202 PF01584 CheW-like domain VPUCM_21204 PF01923 Cobalamin adenosyltransferase VPUCM_21205 PF01243 Pyridoxamine 5'-phosphate oxidase VPUCM_21206 PF06228 Haem utilisation ChuX/HutX VPUCM_21207 PF04055 Radical SAM superfamily VPUCM_21208 PF03544 Gram-negative bacterial TonB protein C-terminal VPUCM_21209 PF01618 VPUCM_21209 VPUCM_2121 PF02618 YceG-like family VPUCM_21210 PF02472 Biopolymer transport protein ExbD/TolR VPUCM_21211 PF01497 Periplasmic binding protein VPUCM_21212 PF01032 FecCD transport family VPUCM_21213 PF00005 ABC transporter VPUCM_21214 PF00440 Bacterial regulatory proteins, tetR family VPUCM_21215 PF04175 Protein of unknown function (DUF406) VPUCM_21216 PF07383 VPUCM_21216 VPUCM_21218 PF01553 Acyltransferase VPUCM_2122 PF01063 Aminotransferase class IV VPUCM_21222 PF01467 Cytidylyltransferase VPUCM_21223 PF02540 NAD synthase VPUCM_21224 PF00111 2Fe-2S iron-sulfur cluster binding domain VPUCM_21224 PF00175 Oxidoreductase NAD-binding domain VPUCM_21224 PF00970 Oxidoreductase FAD-binding domain VPUCM_21224 PF03473 MOSC domain VPUCM_21224 PF03476 MOSC N-terminal beta barrel domain VPUCM_21225 PF01679 VPUCM_21225 VPUCM_21226 PF01979 Amidohydrolase family VPUCM_21227 PF05661 VPUCM_21227 VPUCM_21228 PF00246 Zinc carboxypeptidase VPUCM_21229 PF02311 AraC-like ligand binding domain VPUCM_21229 PF12833 Helix-turn-helix domain VPUCM_2123 PF00109 Beta-ketoacyl synthase, N-terminal domain VPUCM_2123 PF02801 Beta-ketoacyl synthase, C-terminal domain VPUCM_21230 PF00892 EamA-like transporter family VPUCM_21231 PF03061 Thioesterase superfamily VPUCM_21233 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_21234 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_21234 PF14785 Maltose transport system permease protein MalF P2 domain VPUCM_21235 PF13416 Bacterial extracellular solute-binding protein VPUCM_21236 PF00005 ABC transporter VPUCM_21236 PF08402 TOBE domain VPUCM_21237 PF02397 VPUCM_21237 VPUCM_21237 PF13727 CoA-binding domain VPUCM_21238 PF10082 VPUCM_21238 VPUCM_21239 PF02563 Polysaccharide biosynthesis/export protein VPUCM_21239 PF10531 SLBB domain VPUCM_2124 PF00550 Phosphopantetheine attachment site VPUCM_21240 PF02706 Chain length determinant protein VPUCM_21240 PF13614 AAA domain VPUCM_21240 PF13807 VPUCM_21240 VPUCM_21241 PF10364 VPUCM_21241 VPUCM_21242 PF00534 Glycosyl transferases group 1 VPUCM_21242 PF13439 Glycosyltransferase Family 4 VPUCM_21243 PF04932 VPUCM_21243 VPUCM_21244 PF10364 VPUCM_21244 VPUCM_21245 PF13579 Glycosyl transferase 4-like domain VPUCM_21245 PF13692 Glycosyl transferases group 1 VPUCM_21246 PF01943 VPUCM_21246 VPUCM_21246 PF14667 Polysaccharide biosynthesis C-terminal domain VPUCM_21247 PF04892 VPUCM_21247 VPUCM_21248 PF04266 ASCH domain VPUCM_21249 PF00440 Bacterial regulatory proteins, tetR family VPUCM_21249 PF16925 VPUCM_21249 VPUCM_2125 PF13561 Enoyl-(Acyl carrier protein) reductase VPUCM_21250 PF00107 Zinc-binding dehydrogenase VPUCM_21250 PF16884 VPUCM_21250 VPUCM_21251 PF00043 Glutathione S-transferase, C-terminal domain VPUCM_21251 PF02798 Glutathione S-transferase, N-terminal domain VPUCM_21252 PF00199 Catalase VPUCM_21252 PF06628 Catalase-related immune-responsive VPUCM_21253 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VPUCM_21253 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VPUCM_21254 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VPUCM_21254 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VPUCM_21254 PF02378 Phosphotransferase system, EIIC VPUCM_21255 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VPUCM_21256 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VPUCM_21257 PF12833 Helix-turn-helix domain VPUCM_21258 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VPUCM_21258 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VPUCM_21258 PF02378 Phosphotransferase system, EIIC VPUCM_21259 PF01238 Phosphomannose isomerase type I VPUCM_2126 PF00698 Acyl transferase domain VPUCM_21261 PF13419 Haloacid dehalogenase-like hydrolase VPUCM_21262 PF00127 Copper binding proteins, plastocyanin/azurin family VPUCM_21263 PF00563 EAL domain VPUCM_21263 PF02378 Phosphotransferase system, EIIC VPUCM_21264 PF02386 Cation transport protein VPUCM_21265 PF02254 TrkA-N domain VPUCM_21266 PF00072 Response regulator receiver domain VPUCM_21266 PF00486 Transcriptional regulatory protein, C terminal VPUCM_21267 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_21267 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_21267 PF13493 Domain of unknown function (DUF4118) VPUCM_21268 PF00005 ABC transporter VPUCM_21268 PF00664 ABC transporter transmembrane region VPUCM_21269 PF00593 TonB dependent receptor VPUCM_21269 PF07715 TonB-dependent Receptor Plug Domain VPUCM_2127 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VPUCM_2127 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VPUCM_21270 PF00005 ABC transporter VPUCM_21271 PF01497 Periplasmic binding protein VPUCM_21272 PF01032 FecCD transport family VPUCM_21273 PF00924 Mechanosensitive ion channel VPUCM_21274 PF13437 HlyD family secretion protein VPUCM_21274 PF13533 Biotin-lipoyl like VPUCM_21275 PF00005 ABC transporter VPUCM_21276 PF00353 Hemolysin-type calcium-binding repeat (2 copies) VPUCM_21277 PF00196 Bacterial regulatory proteins, luxR family VPUCM_21278 PF00196 Bacterial regulatory proteins, luxR family VPUCM_2128 PF02504 Fatty acid synthesis protein VPUCM_21280 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VPUCM_21280 PF00672 HAMP domain VPUCM_21282 PF07726 ATPase family associated with various cellular activities (AAA) VPUCM_21283 PF01882 VPUCM_21283 VPUCM_21284 PF14316 VPUCM_21284 VPUCM_21285 PF00092 von Willebrand factor type A domain VPUCM_21286 PF07719 Tetratricopeptide repeat VPUCM_21286 PF13519 von Willebrand factor type A domain VPUCM_21287 PF13584 VPUCM_21287 VPUCM_21288 PF00990 GGDEF domain VPUCM_21289 PF00005 ABC transporter VPUCM_2129 PF01783 Ribosomal L32p protein family VPUCM_21290 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_21291 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_21292 PF12849 PBP superfamily domain VPUCM_21293 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VPUCM_21293 PF00672 HAMP domain VPUCM_21294 PF07603 VPUCM_21294 VPUCM_21295 PF07603 VPUCM_21295 VPUCM_21296 PF01483 Proprotein convertase P-domain VPUCM_21297 PF00593 TonB dependent receptor VPUCM_21297 PF07715 TonB-dependent Receptor Plug Domain VPUCM_21298 PF00326 Prolyl oligopeptidase family VPUCM_21298 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain VPUCM_21299 PF00270 DEAD/DEAH box helicase VPUCM_21299 PF00271 Helicase conserved C-terminal domain VPUCM_2130 PF02620 VPUCM_2130 VPUCM_21300 PF04728 Lipoprotein leucine-zipper VPUCM_21301 PF00132 Bacterial transferase hexapeptide (six repeats) VPUCM_21301 PF14602 Hexapeptide repeat of succinyl-transferase VPUCM_21302 PF01476 LysM domain VPUCM_21302 PF03734 L,D-transpeptidase catalytic domain VPUCM_21303 PF00875 DNA photolyase VPUCM_21303 PF03441 FAD binding domain of DNA photolyase VPUCM_21304 PF13411 MerR HTH family regulatory protein VPUCM_21305 PF04463 VPUCM_21305 VPUCM_21305 PF08349 VPUCM_21305 VPUCM_21306 PF01048 Phosphorylase superfamily VPUCM_21309 PF00990 GGDEF domain VPUCM_2131 PF02545 Maf-like protein VPUCM_21310 PF11742 VPUCM_21310 VPUCM_21311 PF13533 Biotin-lipoyl like VPUCM_21312 PF07155 ECF-type riboflavin transporter, S component VPUCM_21313 PF00005 ABC transporter VPUCM_21313 PF12558 VPUCM_21313 VPUCM_21314 PF02361 Cobalt transport protein VPUCM_21315 PF07690 Major Facilitator Superfamily VPUCM_21316 PF12801 VPUCM_21316 VPUCM_21316 PF13187 4Fe-4S dicluster domain VPUCM_21317 PF12800 4Fe-4S binding domain VPUCM_21317 PF12838 4Fe-4S dicluster domain VPUCM_21318 PF00583 Acetyltransferase (GNAT) family VPUCM_21319 PF02958 Ecdysteroid kinase VPUCM_2132 PF00849 RNA pseudouridylate synthase VPUCM_2132 PF01479 S4 domain VPUCM_21320 PF14542 GCN5-related N-acetyl-transferase VPUCM_21321 PF07238 PilZ domain VPUCM_21321 PF12945 Flagellar protein YcgR VPUCM_21322 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VPUCM_21322 PF00672 HAMP domain VPUCM_21323 PF05362 Lon protease (S16) C-terminal proteolytic domain VPUCM_21323 PF13654 AAA domain VPUCM_21325 PF00005 ABC transporter VPUCM_21325 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VPUCM_21326 PF00326 Prolyl oligopeptidase family VPUCM_21326 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain VPUCM_21327 PF03466 LysR substrate binding domain VPUCM_21328 PF02652 VPUCM_21328 VPUCM_21329 PF01070 FMN-dependent dehydrogenase VPUCM_21330 PF13443 Cro/C1-type HTH DNA-binding domain VPUCM_21331 PF00924 Mechanosensitive ion channel VPUCM_21332 PF00194 Eukaryotic-type carbonic anhydrase VPUCM_21333 PF05229 VPUCM_21333 VPUCM_21334 PF00577 Outer membrane usher protein VPUCM_21335 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain VPUCM_21336 PF05229 VPUCM_21336 VPUCM_21337 PF05229 VPUCM_21337 VPUCM_21338 PF00107 Zinc-binding dehydrogenase VPUCM_21338 PF08240 Alcohol dehydrogenase GroES-like domain VPUCM_21339 PF00155 Aminotransferase class I and II VPUCM_2134 PF00575 S1 RNA binding domain VPUCM_2134 PF10150 Ribonuclease E/G family VPUCM_21340 PF00563 EAL domain VPUCM_21340 PF00990 GGDEF domain VPUCM_21341 PF00497 Bacterial extracellular solute-binding proteins, family 3 VPUCM_21342 PF00266 Aminotransferase class-V VPUCM_21343 PF00080 Copper/zinc superoxide dismutase (SODC) VPUCM_21344 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_21345 PF00072 Response regulator receiver domain VPUCM_21345 PF00486 Transcriptional regulatory protein, C terminal VPUCM_21346 PF06468 Spondin_N VPUCM_21347 PF06468 Spondin_N VPUCM_2135 PF00916 VPUCM_2135 VPUCM_2135 PF01740 STAS domain VPUCM_21350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_21350 PF03466 LysR substrate binding domain VPUCM_21351 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VPUCM_21352 PF03929 VPUCM_21352 VPUCM_21354 PF07361 Cytochrome b562 VPUCM_21356 PF08327 Activator of Hsp90 ATPase homolog 1-like protein VPUCM_21357 PF00892 EamA-like transporter family VPUCM_21358 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_21358 PF03466 LysR substrate binding domain VPUCM_21359 PF00089 Trypsin VPUCM_2136 PF01451 Low molecular weight phosphotyrosine protein phosphatase VPUCM_21360 PF02050 Flagellar FliJ protein VPUCM_21361 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VPUCM_21362 PF02108 VPUCM_21362 VPUCM_21363 PF01706 FliG C-terminal domain VPUCM_21363 PF14841 FliG middle domain VPUCM_21363 PF14842 FliG N-terminal domain VPUCM_21364 PF01514 Secretory protein of YscJ/FliF family VPUCM_21364 PF08345 VPUCM_21364 VPUCM_21365 PF02049 VPUCM_21365 VPUCM_21366 PF00158 Sigma-54 interaction domain VPUCM_21366 PF02954 Bacterial regulatory protein, Fis family VPUCM_21367 PF00691 OmpA family VPUCM_21368 PF01052 Surface presentation of antigens (SPOA) VPUCM_21369 PF01052 Surface presentation of antigens (SPOA) VPUCM_2137 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP VPUCM_2137 PF12557 Cob(I)alamin adenosyltransferase N terminal VPUCM_21370 PF00813 VPUCM_21370 VPUCM_21371 PF01313 VPUCM_21371 VPUCM_21372 PF01311 VPUCM_21372 VPUCM_21373 PF01312 FlhB HrpN YscU SpaS Family VPUCM_21374 PF00771 FHIPEP family VPUCM_21375 PF00563 EAL domain VPUCM_21376 PF00669 Bacterial flagellin N-terminal helical region VPUCM_21376 PF00700 Bacterial flagellin C-terminal helical region VPUCM_21377 PF01973 VPUCM_21377 VPUCM_21378 PF02465 VPUCM_21378 VPUCM_21378 PF07195 VPUCM_21378 VPUCM_21379 PF02561 Flagellar protein FliS VPUCM_2138 PF05170 VPUCM_2138 VPUCM_21381 PF02120 Flagellar hook-length control protein FliK VPUCM_21382 PF03748 VPUCM_21382 VPUCM_21383 PF04542 Sigma-70 region 2 VPUCM_21383 PF04545 Sigma-70, region 4 VPUCM_21384 PF01618 VPUCM_21384 VPUCM_21385 PF00691 OmpA family VPUCM_21385 PF13677 VPUCM_21385 VPUCM_21387 PF08000 Bacterial PH domain VPUCM_21389 PF09493 VPUCM_21389 VPUCM_2139 PF00485 Phosphoribulokinase / Uridine kinase family VPUCM_21390 PF04982 VPUCM_21390 VPUCM_21391 PF00440 Bacterial regulatory proteins, tetR family VPUCM_21392 PF01228 Glycine radical VPUCM_21392 PF02901 Pyruvate formate lyase VPUCM_21393 PF04055 Radical SAM superfamily VPUCM_21393 PF13353 4Fe-4S single cluster domain VPUCM_21394 PF00923 Transaldolase VPUCM_21395 PF10973 VPUCM_21395 VPUCM_21396 PF00583 Acetyltransferase (GNAT) family VPUCM_21397 PF00583 Acetyltransferase (GNAT) family VPUCM_21398 PF07690 Major Facilitator Superfamily VPUCM_21399 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_21399 PF03466 LysR substrate binding domain VPUCM_2140 PF10609 ParA/MinD ATPase like VPUCM_21400 PF00892 EamA-like transporter family VPUCM_21402 PF04632 VPUCM_21402 VPUCM_21403 PF02321 Outer membrane efflux protein VPUCM_21404 PF07869 VPUCM_21404 VPUCM_21405 PF16576 VPUCM_21405 VPUCM_21406 PF07885 Ion channel VPUCM_21407 PF01594 VPUCM_21407 VPUCM_21408 PF09829 VPUCM_21408 VPUCM_21409 PF06271 VPUCM_21409 VPUCM_2141 PF01588 Putative tRNA binding domain VPUCM_2141 PF09334 tRNA synthetases class I (M) VPUCM_21410 PF00175 Oxidoreductase NAD-binding domain VPUCM_21410 PF00970 Oxidoreductase FAD-binding domain VPUCM_21411 PF13279 Thioesterase-like superfamily VPUCM_21412 PF09905 Uncharacterized conserved protein (DUF2132) VPUCM_21413 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_21413 PF03466 LysR substrate binding domain VPUCM_21414 PF03992 Antibiotic biosynthesis monooxygenase VPUCM_21415 PF00881 Nitroreductase family VPUCM_21416 PF12833 Helix-turn-helix domain VPUCM_21417 PF00128 Alpha amylase, catalytic domain VPUCM_21417 PF09985 Domain of unknown function (DUF2223) VPUCM_21418 PF00768 D-alanyl-D-alanine carboxypeptidase VPUCM_21418 PF07943 Penicillin-binding protein 5, C-terminal domain VPUCM_21419 PF00561 alpha/beta hydrolase fold VPUCM_21420 PF00583 Acetyltransferase (GNAT) family VPUCM_21421 PF00581 Rhodanese-like domain VPUCM_21422 PF03067 Chitin binding domain VPUCM_21423 PF01734 Patatin-like phospholipase VPUCM_21424 PF01914 VPUCM_21424 VPUCM_21425 PF00881 Nitroreductase family VPUCM_21428 PF08803 Putative mono-oxygenase ydhR VPUCM_21429 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_21429 PF03466 LysR substrate binding domain VPUCM_2143 PF00392 Bacterial regulatory proteins, gntR family VPUCM_2143 PF07840 FadR C-terminal domain VPUCM_21430 PF08874 VPUCM_21430 VPUCM_21431 PF00375 Sodium:dicarboxylate symporter family VPUCM_21432 PF06803 VPUCM_21432 VPUCM_21433 PF01546 Peptidase family M20/M25/M40 VPUCM_21433 PF07687 Peptidase dimerisation domain VPUCM_21434 PF07670 Nucleoside recognition VPUCM_21435 PF07670 Nucleoside recognition VPUCM_21437 PF13462 Thioredoxin VPUCM_21438 PF00128 Alpha amylase, catalytic domain VPUCM_21439 PF00912 Transglycosylase VPUCM_2144 PF06450 VPUCM_2144 VPUCM_21440 PF00128 Alpha amylase, catalytic domain VPUCM_21440 PF02806 Alpha amylase, C-terminal all-beta domain VPUCM_21440 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VPUCM_21441 PF02446 4-alpha-glucanotransferase VPUCM_21442 PF00343 Carbohydrate phosphorylase VPUCM_21444 PF00196 Bacterial regulatory proteins, luxR family VPUCM_21446 PF04018 VPUCM_21446 VPUCM_21448 PF02630 SCO1/SenC VPUCM_21449 PF04314 Protein of unknown function (DUF461) VPUCM_21450 PF00367 phosphotransferase system, EIIB VPUCM_21451 PF03193 Protein of unknown function, DUF258 VPUCM_21452 PF00375 Sodium:dicarboxylate symporter family VPUCM_21454 PF08543 Phosphomethylpyrimidine kinase VPUCM_21455 PF04014 Antidote-toxin recognition MazE VPUCM_21456 PF13520 Amino acid permease VPUCM_21457 PF01276 Orn/Lys/Arg decarboxylase, major domain VPUCM_21457 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain VPUCM_21457 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain VPUCM_21459 PF08238 Sel1 repeat VPUCM_2146 PF02600 Disulfide bond formation protein DsbB VPUCM_21460 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VPUCM_21460 PF03714 Bacterial pullanase-associated domain VPUCM_21460 PF11852 Domain of unknown function (DUF3372) VPUCM_21461 PF02018 Carbohydrate binding domain VPUCM_21461 PF04231 Endonuclease I VPUCM_21462 PF00128 Alpha amylase, catalytic domain VPUCM_21464 PF07148 VPUCM_21464 VPUCM_21465 PF02264 LamB porin VPUCM_21466 PF00128 Alpha amylase, catalytic domain VPUCM_21466 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VPUCM_21467 PF00239 Resolvase, N terminal domain VPUCM_21468 PF07690 Major Facilitator Superfamily VPUCM_2147 PF02810 SEC-C motif VPUCM_2147 PF03695 Uncharacterised protein family (UPF0149) VPUCM_21470 PF01551 Peptidase family M23 VPUCM_21471 PF04519 VPUCM_21471 VPUCM_21472 PF00675 Insulinase (Peptidase family M16) VPUCM_21472 PF05193 Peptidase M16 inactive domain VPUCM_21473 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VPUCM_21473 PF00672 HAMP domain VPUCM_21473 PF02743 Cache domain VPUCM_21474 PF00005 ABC transporter VPUCM_21475 PF01032 FecCD transport family VPUCM_21476 PF01032 FecCD transport family VPUCM_21477 PF01497 Periplasmic binding protein VPUCM_21478 PF00593 TonB dependent receptor VPUCM_21478 PF07715 TonB-dependent Receptor Plug Domain VPUCM_21479 PF00593 TonB dependent receptor VPUCM_21479 PF07715 TonB-dependent Receptor Plug Domain VPUCM_2148 PF01207 Dihydrouridine synthase (Dus) VPUCM_21481 PF04183 IucA / IucC family VPUCM_21481 PF06276 Ferric iron reductase FhuF-like transporter VPUCM_21482 PF07690 Major Facilitator Superfamily VPUCM_21483 PF04183 IucA / IucC family VPUCM_21483 PF06276 Ferric iron reductase FhuF-like transporter VPUCM_21484 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain VPUCM_21484 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VPUCM_21485 PF13416 Bacterial extracellular solute-binding protein VPUCM_21486 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_21487 PF00072 Response regulator receiver domain VPUCM_21487 PF00486 Transcriptional regulatory protein, C terminal VPUCM_21488 PF00367 phosphotransferase system, EIIB VPUCM_21488 PF02378 Phosphotransferase system, EIIC VPUCM_21489 PF03625 Domain of unknown function DUF302 VPUCM_2149 PF13174 Tetratricopeptide repeat VPUCM_2149 PF13432 Tetratricopeptide repeat VPUCM_2149 PF16331 VPUCM_2149 VPUCM_21490 PF01136 VPUCM_21490 VPUCM_21491 PF13847 Methyltransferase domain VPUCM_21493 PF00535 Glycosyl transferase family 2 VPUCM_21494 PF13231 VPUCM_21494 VPUCM_21495 PF11730 VPUCM_21495 VPUCM_21496 PF02698 DUF218 domain VPUCM_21497 PF02566 OsmC-like protein VPUCM_21498 PF01047 MarR family VPUCM_21499 PF00578 AhpC/TSA family VPUCM_21499 PF10417 C-terminal domain of 1-Cys peroxiredoxin VPUCM_2150 PF00691 OmpA family VPUCM_21500 PF07992 Pyridine nucleotide-disulphide oxidoreductase VPUCM_21500 PF13192 Thioredoxin domain VPUCM_21501 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VPUCM_21502 PF00188 Cysteine-rich secretory protein family VPUCM_21503 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_21503 PF03466 LysR substrate binding domain VPUCM_21504 PF01965 DJ-1/PfpI family VPUCM_21505 PF04542 Sigma-70 region 2 VPUCM_21505 PF08281 Sigma-70, region 4 VPUCM_21508 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VPUCM_21508 PF13682 Chemoreceptor zinc-binding domain VPUCM_21509 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_21509 PF03466 LysR substrate binding domain VPUCM_2151 PF04052 TolB amino-terminal domain VPUCM_2151 PF07676 WD40-like Beta Propeller Repeat VPUCM_21510 PF02056 Family 4 glycosyl hydrolase VPUCM_21510 PF11975 Family 4 glycosyl hydrolase C-terminal domain VPUCM_21511 PF08240 Alcohol dehydrogenase GroES-like domain VPUCM_21511 PF13602 Zinc-binding dehydrogenase VPUCM_21512 PF12833 Helix-turn-helix domain VPUCM_21513 PF03473 MOSC domain VPUCM_21513 PF03475 3-alpha domain VPUCM_21514 PF00270 DEAD/DEAH box helicase VPUCM_21514 PF00271 Helicase conserved C-terminal domain VPUCM_21515 PF02627 Carboxymuconolactone decarboxylase family VPUCM_21517 PF07883 Cupin domain VPUCM_21518 PF06719 VPUCM_21518 VPUCM_21518 PF12833 Helix-turn-helix domain VPUCM_21519 PF02274 Amidinotransferase VPUCM_2152 PF06519 TolA C-terminal VPUCM_21520 PF00005 ABC transporter VPUCM_21520 PF00664 ABC transporter transmembrane region VPUCM_21522 PF01037 AsnC family VPUCM_21522 PF13412 Winged helix-turn-helix DNA-binding VPUCM_21525 PF13302 Acetyltransferase (GNAT) domain VPUCM_21527 PF00076 RNA recognition motif VPUCM_21528 PF13302 Acetyltransferase (GNAT) domain VPUCM_21529 PF00474 Sodium:solute symporter family VPUCM_2153 PF02472 Biopolymer transport protein ExbD/TolR VPUCM_21531 PF00171 Aldehyde dehydrogenase family VPUCM_21531 PF01619 Proline dehydrogenase VPUCM_21531 PF14850 DNA-binding domain of Proline dehydrogenase VPUCM_21532 PF12833 Helix-turn-helix domain VPUCM_21533 PF00196 Bacterial regulatory proteins, luxR family VPUCM_21533 PF08448 PAS fold VPUCM_21534 PF01243 Pyridoxamine 5'-phosphate oxidase VPUCM_21534 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region VPUCM_21535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_21535 PF02743 Cache domain VPUCM_21536 PF00072 Response regulator receiver domain VPUCM_21536 PF02954 Bacterial regulatory protein, Fis family VPUCM_21537 PF13437 HlyD family secretion protein VPUCM_21537 PF13533 Biotin-lipoyl like VPUCM_21538 PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP VPUCM_21539 PF00563 EAL domain VPUCM_21539 PF00990 GGDEF domain VPUCM_21539 PF16448 VPUCM_21539 VPUCM_2154 PF01618 VPUCM_2154 VPUCM_21540 PF00005 ABC transporter VPUCM_21540 PF00664 ABC transporter transmembrane region VPUCM_21542 PF00924 Mechanosensitive ion channel VPUCM_21543 PF03358 NADPH-dependent FMN reductase VPUCM_21544 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VPUCM_21545 PF00246 Zinc carboxypeptidase VPUCM_21546 PF01380 SIS domain VPUCM_21546 PF01418 Helix-turn-helix domain, rpiR family VPUCM_21547 PF13580 SIS domain VPUCM_21548 PF00367 phosphotransferase system, EIIB VPUCM_21548 PF02378 Phosphotransferase system, EIIC VPUCM_2155 PF03061 Thioesterase superfamily VPUCM_21550 PF03575 Peptidase family S51 VPUCM_21551 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_21551 PF03466 LysR substrate binding domain VPUCM_21552 PF00132 Bacterial transferase hexapeptide (six repeats) VPUCM_21553 PF03961 VPUCM_21553 VPUCM_21554 PF05127 Helicase VPUCM_21554 PF08351 Domain of unknown function (DUF1726) VPUCM_21554 PF13718 GNAT acetyltransferase 2 VPUCM_21554 PF17176 VPUCM_21554 VPUCM_21555 PF02195 ParB-like nuclease domain VPUCM_21556 PF13614 AAA domain VPUCM_2156 PF09600 VPUCM_2156 VPUCM_2157 PF02322 VPUCM_2157 VPUCM_2158 PF01654 VPUCM_2158 VPUCM_2159 PF05491 Holliday junction DNA helicase ruvB C-terminus VPUCM_2159 PF05496 Holliday junction DNA helicase ruvB N-terminus VPUCM_2160 PF01330 RuvA N terminal domain VPUCM_2160 PF07499 RuvA, C-terminal domain VPUCM_2160 PF14520 Helix-hairpin-helix domain VPUCM_2161 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VPUCM_2162 PF02075 Crossover junction endodeoxyribonuclease RuvC VPUCM_2163 PF00152 tRNA synthetases class II (D, K and N) VPUCM_2163 PF01336 OB-fold nucleic acid binding domain VPUCM_2163 PF02938 GAD domain VPUCM_2165 PF01904 Protein of unknown function DUF72 VPUCM_2166 PF13649 Methyltransferase domain VPUCM_2167 PF08003 Protein of unknown function (DUF1698) VPUCM_2168 PF05618 Putative ATP-dependant zinc protease VPUCM_2169 PF14400 VPUCM_2169 VPUCM_2169 PF14402 VPUCM_2169 VPUCM_2170 PF14397 VPUCM_2170 VPUCM_2172 PF04310 MukB N-terminal VPUCM_2172 PF13558 Putative exonuclease SbcCD, C subunit VPUCM_2172 PF16330 VPUCM_2172 VPUCM_2173 PF04288 MukE-like family VPUCM_2174 PF03882 KicB killing factor VPUCM_2174 PF17192 VPUCM_2174 VPUCM_2174 PF17193 VPUCM_2174 VPUCM_2175 PF08241 Methyltransferase domain VPUCM_2176 PF02698 DUF218 domain VPUCM_2177 PF00072 Response regulator receiver domain VPUCM_2177 PF00486 Transcriptional regulatory protein, C terminal VPUCM_2178 PF02613 Nitrate reductase delta subunit VPUCM_2179 PF00356 Bacterial regulatory proteins, lacI family VPUCM_2179 PF13377 Periplasmic binding protein-like domain VPUCM_2180 PF04993 TfoX N-terminal domain VPUCM_2180 PF04994 TfoX C-terminal domain VPUCM_2181 PF09335 VPUCM_2181 VPUCM_2182 PF09413 Domain of unknown function (DUF2007) VPUCM_2183 PF00561 alpha/beta hydrolase fold VPUCM_2184 PF00534 Glycosyl transferases group 1 VPUCM_2184 PF08323 Starch synthase catalytic domain VPUCM_2185 PF00483 Nucleotidyl transferase VPUCM_2186 PF01131 DNA topoisomerase VPUCM_2186 PF01396 VPUCM_2186 VPUCM_2186 PF01751 Toprim domain VPUCM_2186 PF08272 Topoisomerase I zinc-ribbon-like VPUCM_2187 PF10692 Protein of unknown function (DUF2498) VPUCM_2188 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VPUCM_2189 PF05433 VPUCM_2189 VPUCM_2190 PF03588 Leucyl/phenylalanyl-tRNA protein transferase VPUCM_2191 PF04376 VPUCM_2191 VPUCM_2191 PF04377 VPUCM_2191 VPUCM_2192 PF01176 Translation initiation factor 1A / IF-1 VPUCM_2193 PF00144 Beta-lactamase VPUCM_2194 PF00004 ATPase family associated with various cellular activities (AAA) VPUCM_2194 PF02861 Clp amino terminal domain VPUCM_2194 PF07724 AAA domain (Cdc48 subfamily) VPUCM_2194 PF10431 C-terminal, D2-small domain, of ClpB protein VPUCM_2195 PF02617 ATP-dependent Clp protease adaptor protein ClpS VPUCM_2196 PF00313 'Cold-shock' DNA-binding domain VPUCM_2197 PF03971 Monomeric isocitrate dehydrogenase VPUCM_2198 PF00849 RNA pseudouridylate synthase VPUCM_2199 PF09829 VPUCM_2199 VPUCM_2200 PF13609 Gram-negative porin VPUCM_2201 PF04851 Type III restriction enzyme, res subunit VPUCM_2201 PF13307 Helicase C-terminal domain VPUCM_2202 PF01925 VPUCM_2202 VPUCM_2203 PF07445 Primosomal replication protein priB and priC VPUCM_2204 PF10689 VPUCM_2204 VPUCM_2205 PF03372 Endonuclease/Exonuclease/phosphatase family VPUCM_2206 PF13006 VPUCM_2206 VPUCM_2207 PF02508 VPUCM_2207 VPUCM_2208 PF04060 Putative Fe-S cluster VPUCM_2208 PF14697 4Fe-4S dicluster domain VPUCM_2209 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit VPUCM_2209 PF10531 SLBB domain VPUCM_2209 PF12838 4Fe-4S dicluster domain VPUCM_2209 PF13375 RnfC Barrel sandwich hybrid domain VPUCM_2210 PF03116 VPUCM_2210 VPUCM_2211 PF04205 FMN-binding domain VPUCM_2212 PF02508 VPUCM_2212 VPUCM_2213 PF00633 Helix-hairpin-helix motif VPUCM_2213 PF00730 HhH-GPD superfamily base excision DNA repair protein VPUCM_2213 PF10576 Iron-sulfur binding domain of endonuclease III VPUCM_2214 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VPUCM_2215 PF10952 VPUCM_2215 VPUCM_2216 PF00691 OmpA family VPUCM_2217 PF00929 Exonuclease VPUCM_2218 PF03553 VPUCM_2218 VPUCM_2218 PF13726 VPUCM_2218 VPUCM_2219 PF13743 Thioredoxin VPUCM_2220 PF00462 Glutaredoxin VPUCM_2221 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VPUCM_2221 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VPUCM_2222 PF11993 VPUCM_2222 VPUCM_2223 PF00106 short chain dehydrogenase VPUCM_2224 PF00171 Aldehyde dehydrogenase family VPUCM_2224 PF00465 Iron-containing alcohol dehydrogenase VPUCM_2225 PF01914 VPUCM_2225 VPUCM_2226 PF00520 Ion transport protein VPUCM_2227 PF01118 Semialdehyde dehydrogenase, NAD binding domain VPUCM_2227 PF02774 Semialdehyde dehydrogenase, dimerisation domain VPUCM_2228 PF03553 VPUCM_2228 VPUCM_2230 PF01627 Hpt domain VPUCM_2231 PF04245 VPUCM_2231 VPUCM_2232 PF07208 Protein of unknown function (DUF1414) VPUCM_2233 PF00884 Sulfatase VPUCM_2233 PF11893 VPUCM_2233 VPUCM_2234 PF00850 Histone deacetylase domain VPUCM_2235 PF00106 short chain dehydrogenase VPUCM_2237 PF01131 DNA topoisomerase VPUCM_2237 PF01751 Toprim domain VPUCM_2238 PF00881 Nitroreductase family VPUCM_2239 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VPUCM_2239 PF07992 Pyridine nucleotide-disulphide oxidoreductase VPUCM_2240 PF01343 Peptidase family S49 VPUCM_2241 PF00710 Asparaginase VPUCM_2242 PF07023 VPUCM_2242 VPUCM_2243 PF11207 VPUCM_2243 VPUCM_2244 PF01641 SelR domain VPUCM_2245 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VPUCM_2245 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VPUCM_2246 PF01263 Aldose 1-epimerase VPUCM_2247 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VPUCM_2247 PF17201 VPUCM_2247 VPUCM_2248 PF13847 Methyltransferase domain VPUCM_2249 PF04187 Protein of unknown function, DUF399 VPUCM_2251 PF00245 Alkaline phosphatase VPUCM_2252 PF13467 Ribbon-helix-helix domain VPUCM_2253 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VPUCM_2254 PF03992 Antibiotic biosynthesis monooxygenase VPUCM_2255 PF00924 Mechanosensitive ion channel VPUCM_2256 PF04226 VPUCM_2256 VPUCM_2258 PF08348 VPUCM_2258 VPUCM_2258 PF13309 VPUCM_2258 VPUCM_2259 PF03313 VPUCM_2259 VPUCM_2260 PF01042 Endoribonuclease L-PSP VPUCM_2261 PF03222 Tryptophan/tyrosine permease family VPUCM_2263 PF00230 Major intrinsic protein VPUCM_2264 PF02132 RecR protein VPUCM_2264 PF13662 Toprim domain VPUCM_2265 PF02575 YbaB/EbfC DNA-binding family VPUCM_2266 PF12168 VPUCM_2266 VPUCM_2266 PF12169 DNA polymerase III subunits gamma and tau domain III VPUCM_2266 PF12170 DNA polymerase III tau subunit V interacting with alpha VPUCM_2266 PF13177 DNA polymerase III, delta subunit VPUCM_2267 PF00156 Phosphoribosyl transferase domain VPUCM_2268 PF04304 VPUCM_2268 VPUCM_2270 PF00072 Response regulator receiver domain VPUCM_2271 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_2271 PF03466 LysR substrate binding domain VPUCM_2272 PF13340 VPUCM_2272 VPUCM_2274 PF00156 Phosphoribosyl transferase domain VPUCM_2274 PF13522 Glutamine amidotransferase domain VPUCM_2275 PF02674 VPUCM_2275 VPUCM_2276 PF05036 Sporulation related domain VPUCM_2277 PF02875 Mur ligase family, glutamate ligase domain VPUCM_2277 PF08245 Mur ligase middle domain VPUCM_2278 PF01039 Carboxyl transferase domain VPUCM_2279 PF01416 tRNA pseudouridine synthase VPUCM_2281 PF01118 Semialdehyde dehydrogenase, NAD binding domain VPUCM_2281 PF02774 Semialdehyde dehydrogenase, dimerisation domain VPUCM_2282 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VPUCM_2282 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VPUCM_2282 PF11890 Domain of unknown function (DUF3410) VPUCM_2283 PF00109 Beta-ketoacyl synthase, N-terminal domain VPUCM_2283 PF02801 Beta-ketoacyl synthase, C-terminal domain VPUCM_2284 PF01266 FAD dependent oxidoreductase VPUCM_2284 PF05430 S-adenosyl-L-methionine-dependent methyltransferase VPUCM_2285 PF03358 NADPH-dependent FMN reductase VPUCM_2286 PF08891 VPUCM_2286 VPUCM_2287 PF04315 VPUCM_2287 VPUCM_2289 PF03458 VPUCM_2289 VPUCM_2290 PF01264 Chorismate synthase VPUCM_2291 PF05175 Methyltransferase small domain VPUCM_2292 PF01713 Smr domain VPUCM_2293 PF00300 Histidine phosphatase superfamily (branch 1) VPUCM_2294 PF00675 Insulinase (Peptidase family M16) VPUCM_2294 PF05193 Peptidase M16 inactive domain VPUCM_2294 PF16187 VPUCM_2294 VPUCM_2296 PF00378 Enoyl-CoA hydratase/isomerase family VPUCM_2296 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VPUCM_2296 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VPUCM_2297 PF00108 Thiolase, N-terminal domain VPUCM_2297 PF02803 Thiolase, C-terminal domain VPUCM_2298 PF04542 Sigma-70 region 2 VPUCM_2298 PF08281 Sigma-70, region 4 VPUCM_2299 PF11859 VPUCM_2299 VPUCM_2300 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VPUCM_2301 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VPUCM_2302 PF04333 VPUCM_2302 VPUCM_2303 PF14559 Tetratricopeptide repeat VPUCM_2304 PF03918 Cytochrome C biogenesis protein VPUCM_2305 PF08534 Redoxin VPUCM_2306 PF01578 VPUCM_2306 VPUCM_2306 PF16327 VPUCM_2306 VPUCM_2307 PF03100 CcmE VPUCM_2308 PF04995 VPUCM_2308 VPUCM_2309 PF01578 VPUCM_2309 VPUCM_2310 PF03379 VPUCM_2310 VPUCM_2311 PF00005 ABC transporter VPUCM_2312 PF10975 VPUCM_2312 VPUCM_2313 PF01584 CheW-like domain VPUCM_2314 PF01584 CheW-like domain VPUCM_2315 PF13614 AAA domain VPUCM_2316 PF00072 Response regulator receiver domain VPUCM_2316 PF01339 CheB methylesterase VPUCM_2317 PF01584 CheW-like domain VPUCM_2317 PF01627 Hpt domain VPUCM_2317 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_2317 PF02895 Signal transducing histidine kinase, homodimeric domain VPUCM_2318 PF04344 Chemotaxis phosphatase, CheZ VPUCM_2319 PF00072 Response regulator receiver domain VPUCM_2320 PF04539 Sigma-70 region 3 VPUCM_2320 PF04542 Sigma-70 region 2 VPUCM_2320 PF04545 Sigma-70, region 4 VPUCM_2321 PF10609 ParA/MinD ATPase like VPUCM_2322 PF00448 SRP54-type protein, GTPase domain VPUCM_2323 PF00771 FHIPEP family VPUCM_2324 PF01312 FlhB HrpN YscU SpaS Family VPUCM_2325 PF01311 VPUCM_2325 VPUCM_2326 PF01313 VPUCM_2326 VPUCM_2327 PF00813 VPUCM_2327 VPUCM_2328 PF04347 VPUCM_2328 VPUCM_2329 PF01052 Surface presentation of antigens (SPOA) VPUCM_2330 PF01052 Surface presentation of antigens (SPOA) VPUCM_2330 PF02154 Flagellar motor switch protein FliM VPUCM_2331 PF03748 VPUCM_2331 VPUCM_2332 PF02120 Flagellar hook-length control protein FliK VPUCM_2333 PF02050 Flagellar FliJ protein VPUCM_2334 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VPUCM_2335 PF02108 VPUCM_2335 VPUCM_2336 PF01706 FliG C-terminal domain VPUCM_2336 PF14841 FliG middle domain VPUCM_2336 PF14842 FliG N-terminal domain VPUCM_2337 PF01514 Secretory protein of YscJ/FliF family VPUCM_2337 PF08345 VPUCM_2337 VPUCM_2338 PF02049 VPUCM_2338 VPUCM_2339 PF00072 Response regulator receiver domain VPUCM_2339 PF00158 Sigma-54 interaction domain VPUCM_2339 PF02954 Bacterial regulatory protein, Fis family VPUCM_2340 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_2340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_2340 PF13188 PAS domain VPUCM_2341 PF00158 Sigma-54 interaction domain VPUCM_2341 PF02954 Bacterial regulatory protein, Fis family VPUCM_2341 PF06490 VPUCM_2341 VPUCM_2342 PF02561 Flagellar protein FliS VPUCM_2344 PF02465 VPUCM_2344 VPUCM_2344 PF07195 VPUCM_2344 VPUCM_2344 PF07196 Flagellin hook IN motif VPUCM_2345 PF03646 FlaG protein VPUCM_2346 PF00669 Bacterial flagellin N-terminal helical region VPUCM_2346 PF00700 Bacterial flagellin C-terminal helical region VPUCM_2346 PF07196 Flagellin hook IN motif VPUCM_2347 PF00669 Bacterial flagellin N-terminal helical region VPUCM_2347 PF00700 Bacterial flagellin C-terminal helical region VPUCM_2347 PF07196 Flagellin hook IN motif VPUCM_2348 PF00669 Bacterial flagellin N-terminal helical region VPUCM_2348 PF00700 Bacterial flagellin C-terminal helical region VPUCM_2348 PF07196 Flagellin hook IN motif VPUCM_2349 PF04261 Dyp-type peroxidase family VPUCM_2350 PF11143 VPUCM_2350 VPUCM_2351 PF11169 VPUCM_2351 VPUCM_2352 PF13698 VPUCM_2352 VPUCM_2353 PF09904 Winged helix-turn helix VPUCM_2354 PF03960 ArsC family VPUCM_2355 PF01546 Peptidase family M20/M25/M40 VPUCM_2355 PF07687 Peptidase dimerisation domain VPUCM_2356 PF02557 D-alanyl-D-alanine carboxypeptidase VPUCM_2357 PF11446 VPUCM_2357 VPUCM_2358 PF06804 NlpB/DapX lipoprotein VPUCM_2359 PF00701 Dihydrodipicolinate synthetase family VPUCM_2360 PF13740 ACT domain VPUCM_2361 PF00578 AhpC/TSA family VPUCM_2362 PF01594 VPUCM_2362 VPUCM_2363 PF01206 Sulfurtransferase TusA VPUCM_2364 PF01435 Peptidase family M48 VPUCM_2364 PF14559 Tetratricopeptide repeat VPUCM_2365 PF03960 ArsC family VPUCM_2366 PF03358 NADPH-dependent FMN reductase VPUCM_2367 PF09842 VPUCM_2367 VPUCM_2369 PF09839 VPUCM_2369 VPUCM_2370 PF00860 Permease family VPUCM_2371 PF14681 Uracil phosphoribosyltransferase VPUCM_2372 PF00586 AIR synthase related protein, N-terminal domain VPUCM_2372 PF02769 AIR synthase related protein, C-terminal domain VPUCM_2373 PF00551 Formyl transferase VPUCM_2374 PF00549 CoA-ligase VPUCM_2374 PF02629 CoA binding domain VPUCM_2375 PF00549 CoA-ligase VPUCM_2375 PF08442 ATP-grasp domain VPUCM_2376 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VPUCM_2376 PF00364 Biotin-requiring enzyme VPUCM_2376 PF02817 e3 binding domain VPUCM_2377 PF00676 Dehydrogenase E1 component VPUCM_2377 PF02779 Transketolase, pyrimidine binding domain VPUCM_2377 PF16078 VPUCM_2377 VPUCM_2377 PF16870 VPUCM_2377 VPUCM_2378 PF13085 2Fe-2S iron-sulfur cluster binding domain VPUCM_2378 PF13534 4Fe-4S dicluster domain VPUCM_2379 PF00890 FAD binding domain VPUCM_2379 PF02910 Fumarate reductase flavoprotein C-term VPUCM_2380 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit VPUCM_2381 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit VPUCM_2382 PF00285 Citrate synthase VPUCM_2383 PF01784 NIF3 (NGG1p interacting factor 3) VPUCM_2384 PF08907 VPUCM_2384 VPUCM_2385 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VPUCM_2385 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VPUCM_2385 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VPUCM_2385 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VPUCM_2386 PF03925 SeqA protein VPUCM_2386 PF17206 VPUCM_2386 VPUCM_2387 PF12697 Alpha/beta hydrolase family VPUCM_2388 PF10981 VPUCM_2388 VPUCM_2389 PF00258 Flavodoxin VPUCM_2390 PF14539 Domain of unknown function (DUF4442) VPUCM_2391 PF01475 Ferric uptake regulator family VPUCM_2392 PF00749 tRNA synthetases class I (E and Q), catalytic domain VPUCM_2392 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain VPUCM_2393 PF00367 phosphotransferase system, EIIB VPUCM_2393 PF02378 Phosphotransferase system, EIIC VPUCM_2394 PF01979 Amidohydrolase family VPUCM_2395 PF00480 ROK family VPUCM_2396 PF00999 Sodium/hydrogen exchanger family VPUCM_2396 PF02254 TrkA-N domain VPUCM_2397 PF00733 Asparagine synthase VPUCM_2397 PF13537 Glutamine amidotransferase domain VPUCM_2398 PF02357 Transcription termination factor nusG VPUCM_2399 PF00854 POT family VPUCM_2400 PF00762 Ferrochelatase VPUCM_2401 PF00406 Adenylate kinase VPUCM_2401 PF05191 Adenylate kinase, active site lid VPUCM_2402 PF00183 Hsp90 protein VPUCM_2402 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_2403 PF00486 Transcriptional regulatory protein, C terminal VPUCM_2404 PF17323 VPUCM_2404 VPUCM_2405 PF01925 VPUCM_2405 VPUCM_2406 PF10262 Rdx family VPUCM_2407 PF12850 Calcineurin-like phosphoesterase superfamily domain VPUCM_2408 PF00571 CBS domain VPUCM_2410 PF07556 VPUCM_2410 VPUCM_2411 PF07556 VPUCM_2411 VPUCM_2412 PF01370 NAD dependent epimerase/dehydratase family VPUCM_2412 PF08338 Domain of unknown function (DUF1731) VPUCM_2413 PF00106 short chain dehydrogenase VPUCM_2414 PF00085 Thioredoxin VPUCM_2414 PF14559 Tetratricopeptide repeat VPUCM_2414 PF14561 Tetratricopeptide repeat VPUCM_2415 PF05420 VPUCM_2415 VPUCM_2415 PF13181 Tetratricopeptide repeat VPUCM_2415 PF13432 Tetratricopeptide repeat VPUCM_2415 PF14559 Tetratricopeptide repeat VPUCM_2416 PF01270 Glycosyl hydrolases family 8 VPUCM_2417 PF03170 Bacterial cellulose synthase subunit VPUCM_2418 PF00535 Glycosyl transferase family 2 VPUCM_2418 PF07238 PilZ domain VPUCM_2420 PF06564 YhjQ protein VPUCM_2422 PF10995 VPUCM_2422 VPUCM_2424 PF11658 VPUCM_2424 VPUCM_2425 PF01145 SPFH domain / Band 7 family VPUCM_2425 PF16200 VPUCM_2425 VPUCM_2426 PF01957 NfeD-like C-terminal, partner-binding VPUCM_2428 PF00533 BRCA1 C Terminus (BRCT) domain VPUCM_2428 PF01653 NAD-dependent DNA ligase adenylation domain VPUCM_2428 PF03119 NAD-dependent DNA ligase C4 zinc finger domain VPUCM_2428 PF03120 NAD-dependent DNA ligase OB-fold domain VPUCM_2428 PF12826 Helix-hairpin-helix motif VPUCM_2428 PF14520 Helix-hairpin-helix domain VPUCM_2429 PF04354 ZipA, C-terminal FtsZ-binding domain VPUCM_2430 PF07264 Etoposide-induced protein 2 VPUCM_2431 PF00291 Pyridoxal-phosphate dependent enzyme VPUCM_2432 PF00381 PTS HPr component phosphorylation site VPUCM_2433 PF00391 PEP-utilising enzyme, mobile domain VPUCM_2433 PF02896 PEP-utilising enzyme, TIM barrel domain VPUCM_2433 PF05524 PEP-utilising enzyme, N-terminal VPUCM_2434 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VPUCM_2435 PF00669 Bacterial flagellin N-terminal helical region VPUCM_2435 PF00700 Bacterial flagellin C-terminal helical region VPUCM_2435 PF07196 Flagellin hook IN motif VPUCM_2436 PF00669 Bacterial flagellin N-terminal helical region VPUCM_2436 PF00700 Bacterial flagellin C-terminal helical region VPUCM_2436 PF07196 Flagellin hook IN motif VPUCM_2437 PF00669 Bacterial flagellin N-terminal helical region VPUCM_2437 PF00700 Bacterial flagellin C-terminal helical region VPUCM_2437 PF07196 Flagellin hook IN motif VPUCM_2439 PF00669 Bacterial flagellin N-terminal helical region VPUCM_2440 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VPUCM_2441 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase VPUCM_2441 PF10135 VPUCM_2441 VPUCM_2442 PF02119 VPUCM_2442 VPUCM_2443 PF02107 VPUCM_2443 VPUCM_2444 PF00460 Flagella basal body rod protein VPUCM_2444 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VPUCM_2445 PF00460 Flagella basal body rod protein VPUCM_2445 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VPUCM_2447 PF00460 Flagella basal body rod protein VPUCM_2447 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VPUCM_2447 PF07559 Flagellar basal body protein FlaE VPUCM_2448 PF03963 VPUCM_2448 VPUCM_2448 PF13860 FlgD Ig-like domain VPUCM_2448 PF13861 FlgD Tudor-like domain VPUCM_2449 PF00460 Flagella basal body rod protein VPUCM_2449 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VPUCM_2451 PF01739 CheR methyltransferase, SAM binding domain VPUCM_2451 PF03705 CheR methyltransferase, all-alpha domain VPUCM_2452 PF00072 Response regulator receiver domain VPUCM_2452 PF01584 CheW-like domain VPUCM_2453 PF13144 SAF-like VPUCM_2454 PF04316 Anti-sigma-28 factor, FlgM VPUCM_2455 PF05130 FlgN protein VPUCM_2456 PF02169 LPP20 lipoprotein VPUCM_2459 PF16538 VPUCM_2459 VPUCM_2459 PF16539 VPUCM_2459 VPUCM_2459 PF16548 VPUCM_2459 VPUCM_2461 PF00691 OmpA family VPUCM_2461 PF01389 OmpA-like transmembrane domain VPUCM_2462 PF00749 tRNA synthetases class I (E and Q), catalytic domain VPUCM_2463 PF09829 VPUCM_2463 VPUCM_2464 PF13609 Gram-negative porin VPUCM_2466 PF00122 E1-E2 ATPase VPUCM_2466 PF00403 Heavy-metal-associated domain VPUCM_2466 PF00702 haloacid dehalogenase-like hydrolase VPUCM_2467 PF04214 VPUCM_2467 VPUCM_2468 PF06178 Oligogalacturonate-specific porin protein (KdgM) VPUCM_2469 PF00728 Glycosyl hydrolase family 20, catalytic domain VPUCM_2469 PF02838 Glycosyl hydrolase family 20, domain 2 VPUCM_2469 PF03173 Putative carbohydrate binding domain VPUCM_2469 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain VPUCM_2470 PF01963 VPUCM_2470 VPUCM_2471 PF11346 VPUCM_2471 VPUCM_2472 PF01713 Smr domain VPUCM_2473 PF00849 RNA pseudouridylate synthase VPUCM_2473 PF01479 S4 domain VPUCM_2474 PF04073 Aminoacyl-tRNA editing domain VPUCM_2475 PF00149 Calcineurin-like phosphoesterase VPUCM_2475 PF02872 5'-nucleotidase, C-terminal domain VPUCM_2476 PF00793 DAHP synthetase I family VPUCM_2477 PF13369 VPUCM_2477 VPUCM_2477 PF13371 Tetratricopeptide repeat VPUCM_2478 PF04247 VPUCM_2478 VPUCM_2479 PF13847 Methyltransferase domain VPUCM_2480 PF00472 RF-1 domain VPUCM_2480 PF03462 PCRF domain VPUCM_2481 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain VPUCM_2481 PF01488 Shikimate / quinate 5-dehydrogenase VPUCM_2481 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain VPUCM_2482 PF03550 Outer membrane lipoprotein LolB VPUCM_2483 PF00288 GHMP kinases N terminal domain VPUCM_2483 PF08544 GHMP kinases C terminal VPUCM_2484 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase VPUCM_2484 PF14572 Phosphoribosyl synthetase-associated domain VPUCM_2485 PF01195 Peptidyl-tRNA hydrolase VPUCM_2486 PF01926 50S ribosome-binding GTPase VPUCM_2486 PF06071 Protein of unknown function (DUF933) VPUCM_2488 PF01494 FAD binding domain VPUCM_2489 PF00919 Uncharacterized protein family UPF0004 VPUCM_2489 PF01938 TRAM domain VPUCM_2489 PF04055 Radical SAM superfamily VPUCM_2490 PF02562 PhoH-like protein VPUCM_2491 PF02130 Uncharacterized protein family UPF0054 VPUCM_2492 PF00571 CBS domain VPUCM_2492 PF03471 Transporter associated domain VPUCM_2493 PF00795 Carbon-nitrogen hydrolase VPUCM_2494 PF07295 VPUCM_2494 VPUCM_2495 PF00133 tRNA synthetases class I (I, L, M and V) VPUCM_2495 PF08264 Anticodon-binding domain of tRNA VPUCM_2495 PF13603 Leucyl-tRNA synthetase, Domain 2 VPUCM_2496 PF04390 Lipopolysaccharide-assembly VPUCM_2497 PF06144 DNA polymerase III, delta subunit VPUCM_2497 PF14840 Processivity clamp loader gamma complex DNA pol III C-term VPUCM_2498 PF02410 Oligomerisation domain VPUCM_2499 PF02590 Predicted SPOUT methyltransferase VPUCM_2500 PF00905 Penicillin binding protein transpeptidase domain VPUCM_2500 PF03717 Penicillin-binding Protein dimerisation domain VPUCM_2501 PF01098 VPUCM_2501 VPUCM_2502 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel VPUCM_2502 PF05036 Sporulation related domain VPUCM_2503 PF00768 D-alanyl-D-alanine carboxypeptidase VPUCM_2503 PF07943 Penicillin-binding protein 5, C-terminal domain VPUCM_2504 PF04359 Protein of unknown function (DUF493) VPUCM_2505 PF03099 Biotin/lipoate A/B protein ligase family VPUCM_2506 PF04055 Radical SAM superfamily VPUCM_2506 PF16881 VPUCM_2506 VPUCM_2507 PF00464 Serine hydroxymethyltransferase VPUCM_2508 PF02588 VPUCM_2508 VPUCM_2509 PF00486 Transcriptional regulatory protein, C terminal VPUCM_2511 PF00128 Alpha amylase, catalytic domain VPUCM_2511 PF16657 VPUCM_2511 VPUCM_2512 PF00367 phosphotransferase system, EIIB VPUCM_2512 PF02378 Phosphotransferase system, EIIC VPUCM_2513 PF00356 Bacterial regulatory proteins, lacI family VPUCM_2513 PF13377 Periplasmic binding protein-like domain VPUCM_2514 PF13242 HAD-hyrolase-like VPUCM_2516 PF00005 ABC transporter VPUCM_2516 PF09383 NIL domain VPUCM_2517 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_2518 PF03180 NLPA lipoprotein VPUCM_2519 PF10071 VPUCM_2519 VPUCM_2520 PF07348 Syd protein (SUKH-2) VPUCM_2521 PF14489 QueF-like protein VPUCM_2521 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term VPUCM_2523 PF00990 GGDEF domain VPUCM_2524 PF03641 Possible lysine decarboxylase VPUCM_2524 PF11892 Domain of unknown function (DUF3412) VPUCM_2524 PF14793 Domain of unknown function (DUF4478) VPUCM_2525 PF01367 5'-3' exonuclease, C-terminal SAM fold VPUCM_2525 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VPUCM_2526 PF01223 DNA/RNA non-specific endonuclease VPUCM_2527 PF01728 FtsJ-like methyltransferase VPUCM_2528 PF04241 VPUCM_2528 VPUCM_2529 PF12697 Alpha/beta hydrolase family VPUCM_2530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_2530 PF03466 LysR substrate binding domain VPUCM_2531 PF02568 Thiamine biosynthesis protein (ThiI) VPUCM_2531 PF02926 THUMP domain VPUCM_2532 PF00691 OmpA family VPUCM_2532 PF13677 VPUCM_2532 VPUCM_2533 PF01618 VPUCM_2533 VPUCM_2534 PF02609 Exonuclease VII small subunit VPUCM_2535 PF00348 Polyprenyl synthetase VPUCM_2536 PF02779 Transketolase, pyrimidine binding domain VPUCM_2536 PF02780 Transketolase, C-terminal domain VPUCM_2536 PF13292 1-deoxy-D-xylulose-5-phosphate synthase VPUCM_2537 PF04608 Phosphatidylglycerophosphatase A VPUCM_2538 PF00586 AIR synthase related protein, N-terminal domain VPUCM_2538 PF02769 AIR synthase related protein, C-terminal domain VPUCM_2539 PF01029 NusB family VPUCM_2540 PF00885 6,7-dimethyl-8-ribityllumazine synthase VPUCM_2541 PF00925 GTP cyclohydrolase II VPUCM_2541 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase VPUCM_2542 PF00677 Lumazine binding domain VPUCM_2543 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VPUCM_2543 PF01872 RibD C-terminal domain VPUCM_2544 PF03477 ATP cone domain VPUCM_2545 PF00171 Aldehyde dehydrogenase family VPUCM_2546 PF00696 Amino acid kinase family VPUCM_2546 PF01472 PUA domain VPUCM_2547 PF07417 Transcriptional regulator Crl VPUCM_2548 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) VPUCM_2549 PF00156 Phosphoribosyl transferase domain VPUCM_2550 PF00860 Permease family VPUCM_2551 PF01546 Peptidase family M20/M25/M40 VPUCM_2551 PF07687 Peptidase dimerisation domain VPUCM_2552 PF11810 VPUCM_2552 VPUCM_2553 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family VPUCM_2555 PF12286 VPUCM_2555 VPUCM_2556 PF02769 AIR synthase related protein, C-terminal domain VPUCM_2556 PF13507 CobB/CobQ-like glutamine amidotransferase domain VPUCM_2557 PF00497 Bacterial extracellular solute-binding proteins, family 3 VPUCM_2557 PF01464 Transglycosylase SLT domain VPUCM_2558 PF00579 tRNA synthetases class I (W and Y) VPUCM_2559 PF01551 Peptidase family M23 VPUCM_2559 PF08525 VPUCM_2559 VPUCM_2560 PF00873 AcrB/AcrD/AcrF family VPUCM_2561 PF16576 VPUCM_2561 VPUCM_2562 PF01521 Iron-sulphur cluster biosynthesis VPUCM_2563 PF00202 Aminotransferase class-III VPUCM_2566 PF01594 VPUCM_2566 VPUCM_2567 PF05175 Methyltransferase small domain VPUCM_2567 PF08468 Methyltransferase small domain N-terminal VPUCM_2568 PF00072 Response regulator receiver domain VPUCM_2568 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_2568 PF00672 HAMP domain VPUCM_2568 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_2568 PF13188 PAS domain VPUCM_2569 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VPUCM_2570 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_2571 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_2572 PF00005 ABC transporter VPUCM_2572 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VPUCM_2573 PF00005 ABC transporter VPUCM_2573 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VPUCM_2574 PF00759 Glycosyl hydrolase family 9 VPUCM_2574 PF02927 N-terminal ig-like domain of cellulase VPUCM_2575 PF01869 BadF/BadG/BcrA/BcrD ATPase family VPUCM_2576 PF00728 Glycosyl hydrolase family 20, catalytic domain VPUCM_2576 PF02838 Glycosyl hydrolase family 20, domain 2 VPUCM_2577 PF06165 Glycosyltransferase family 36 VPUCM_2577 PF17167 VPUCM_2577 VPUCM_2578 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VPUCM_2578 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VPUCM_2578 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VPUCM_2578 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VPUCM_2579 PF00005 ABC transporter VPUCM_2579 PF08402 TOBE domain VPUCM_2580 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_2581 PF13343 Bacterial extracellular solute-binding protein VPUCM_2582 PF00909 Ammonium Transporter Family VPUCM_2583 PF00543 Nitrogen regulatory protein P-II VPUCM_2584 PF06062 VPUCM_2584 VPUCM_2585 PF00330 Aconitase family (aconitate hydratase) VPUCM_2585 PF06434 Aconitate hydratase 2 N-terminus VPUCM_2585 PF11791 Aconitate B N-terminal domain VPUCM_2586 PF01734 Patatin-like phospholipase VPUCM_2586 PF07244 Surface antigen variable number repeat VPUCM_2587 PF00905 Penicillin binding protein transpeptidase domain VPUCM_2587 PF00912 Transglycosylase VPUCM_2587 PF14814 Bifunctional transglycosylase second domain VPUCM_2588 PF00270 DEAD/DEAH box helicase VPUCM_2588 PF00271 Helicase conserved C-terminal domain VPUCM_2588 PF04408 Helicase associated domain (HA2) VPUCM_2588 PF08482 VPUCM_2588 VPUCM_2589 PF03749 Sugar fermentation stimulation protein VPUCM_2590 PF01258 Prokaryotic dksA/traR C4-type zinc finger VPUCM_2591 PF00749 tRNA synthetases class I (E and Q), catalytic domain VPUCM_2592 PF01743 Poly A polymerase head domain VPUCM_2592 PF12626 Polymerase A arginine-rich C-terminus VPUCM_2592 PF12627 Probable RNA and SrmB- binding site of polymerase A VPUCM_2593 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VPUCM_2594 PF02548 Ketopantoate hydroxymethyltransferase VPUCM_2595 PF02569 Pantoate-beta-alanine ligase VPUCM_2596 PF03279 VPUCM_2596 VPUCM_2597 PF01061 VPUCM_2597 VPUCM_2598 PF00005 ABC transporter VPUCM_2599 PF00916 VPUCM_2599 VPUCM_2599 PF01740 STAS domain VPUCM_2600 PF00484 Carbonic anhydrase VPUCM_2601 PF00156 Phosphoribosyl transferase domain VPUCM_2602 PF00440 Bacterial regulatory proteins, tetR family VPUCM_2603 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VPUCM_2603 PF07992 Pyridine nucleotide-disulphide oxidoreductase VPUCM_2604 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VPUCM_2604 PF00364 Biotin-requiring enzyme VPUCM_2604 PF02817 e3 binding domain VPUCM_2605 PF00456 Transketolase, thiamine diphosphate binding domain VPUCM_2606 PF00392 Bacterial regulatory proteins, gntR family VPUCM_2606 PF07729 FCD domain VPUCM_2607 PF01510 N-acetylmuramoyl-L-alanine amidase VPUCM_2608 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain VPUCM_2608 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain VPUCM_2609 PF00114 Pilin (bacterial filament) VPUCM_2609 PF07963 Prokaryotic N-terminal methylation motif VPUCM_2610 PF00437 Type II/IV secretion system protein VPUCM_2610 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VPUCM_2611 PF00482 Type II secretion system (T2SS), protein F VPUCM_2612 PF01478 Type IV leader peptidase family VPUCM_2612 PF06750 VPUCM_2612 VPUCM_2613 PF01121 Dephospho-CoA kinase VPUCM_2614 PF07072 Protein of unknown function (DUF1342) VPUCM_2615 PF03884 Domain of unknown function (DUF329) VPUCM_2616 PF01245 Ribosomal protein L19 VPUCM_2617 PF01746 tRNA (Guanine-1)-methyltransferase VPUCM_2618 PF01782 RimM N-terminal domain VPUCM_2618 PF05239 PRC-barrel domain VPUCM_2619 PF00886 Ribosomal protein S16 VPUCM_2620 PF00448 SRP54-type protein, GTPase domain VPUCM_2620 PF02881 SRP54-type protein, helical bundle domain VPUCM_2620 PF02978 Signal peptide binding domain VPUCM_2621 PF01578 VPUCM_2621 VPUCM_2622 PF00571 CBS domain VPUCM_2622 PF01595 VPUCM_2622 VPUCM_2622 PF03471 Transporter associated domain VPUCM_2623 PF02664 S-Ribosylhomocysteinase (LuxS) VPUCM_2625 PF04262 Glutamate-cysteine ligase VPUCM_2626 PF00675 Insulinase (Peptidase family M16) VPUCM_2626 PF05193 Peptidase M16 inactive domain VPUCM_2627 PF09335 VPUCM_2627 VPUCM_2628 PF08240 Alcohol dehydrogenase GroES-like domain VPUCM_2628 PF13602 Zinc-binding dehydrogenase VPUCM_2629 PF03977 VPUCM_2629 VPUCM_2630 PF00364 Biotin-requiring enzyme VPUCM_2630 PF00682 HMGL-like VPUCM_2630 PF02436 Conserved carboxylase domain VPUCM_2631 PF04277 VPUCM_2631 VPUCM_2633 PF02599 Global regulator protein family VPUCM_2634 PF00696 Amino acid kinase family VPUCM_2635 PF01411 tRNA synthetases class II (A) VPUCM_2635 PF02272 DHHA1 domain VPUCM_2635 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VPUCM_2636 PF02631 RecX family VPUCM_2637 PF00154 recA bacterial DNA recombination protein VPUCM_2638 PF02464 Competence-damaged protein VPUCM_2639 PF00488 MutS domain V VPUCM_2639 PF01624 MutS domain I VPUCM_2639 PF05188 MutS domain II VPUCM_2639 PF05190 MutS family domain IV VPUCM_2639 PF05192 MutS domain III VPUCM_2640 PF00140 Sigma-70 factor, region 1 VPUCM_2640 PF04539 Sigma-70 region 3 VPUCM_2640 PF04542 Sigma-70 region 2 VPUCM_2640 PF04545 Sigma-70, region 4 VPUCM_2641 PF01476 LysM domain VPUCM_2641 PF01551 Peptidase family M23 VPUCM_2642 PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) VPUCM_2643 PF01975 Survival protein SurE VPUCM_2644 PF01142 tRNA pseudouridine synthase D (TruD) VPUCM_2645 PF02542 YgbB family VPUCM_2646 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase VPUCM_2647 PF04977 Septum formation initiator VPUCM_2648 PF00113 Enolase, C-terminal TIM barrel domain VPUCM_2648 PF03952 Enolase, N-terminal domain VPUCM_2649 PF00117 Glutamine amidotransferase class-I VPUCM_2649 PF06418 CTP synthase N-terminus VPUCM_2650 PF03819 MazG nucleotide pyrophosphohydrolase domain VPUCM_2651 PF02824 TGS domain VPUCM_2651 PF04607 Region found in RelA / SpoT proteins VPUCM_2651 PF13291 ACT domain VPUCM_2651 PF13328 HD domain VPUCM_2652 PF01938 TRAM domain VPUCM_2652 PF05958 tRNA (Uracil-5-)-methyltransferase VPUCM_2653 PF00072 Response regulator receiver domain VPUCM_2653 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_2653 PF01627 Hpt domain VPUCM_2653 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_2653 PF09984 VPUCM_2653 VPUCM_2654 PF01648 4'-phosphopantetheinyl transferase superfamily VPUCM_2655 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ VPUCM_2656 PF02565 Recombination protein O C terminal VPUCM_2656 PF11967 Recombination protein O N terminal VPUCM_2657 PF01926 50S ribosome-binding GTPase VPUCM_2657 PF07650 KH domain VPUCM_2658 PF00035 Double-stranded RNA binding motif VPUCM_2658 PF14622 Ribonuclease-III-like VPUCM_2659 PF00717 Peptidase S24-like VPUCM_2659 PF10502 Signal peptidase, peptidase S26 VPUCM_2660 PF00009 Elongation factor Tu GTP binding domain VPUCM_2660 PF00679 Elongation factor G C-terminus VPUCM_2660 PF03144 Elongation factor Tu domain 2 VPUCM_2660 PF06421 GTP-binding protein LepA C-terminus VPUCM_2661 PF04246 VPUCM_2661 VPUCM_2662 PF03888 MucB/RseB family VPUCM_2662 PF17188 VPUCM_2662 VPUCM_2663 PF03872 Anti sigma-E protein RseA, N-terminal domain VPUCM_2663 PF03873 Anti sigma-E protein RseA, C-terminal domain VPUCM_2664 PF04542 Sigma-70 region 2 VPUCM_2664 PF08281 Sigma-70, region 4 VPUCM_2665 PF00890 FAD binding domain VPUCM_2665 PF02910 Fumarate reductase flavoprotein C-term VPUCM_2666 PF03937 Flavinator of succinate dehydrogenase VPUCM_2667 PF01571 Aminomethyltransferase folate-binding domain VPUCM_2668 PF04073 Aminoacyl-tRNA editing domain VPUCM_2669 PF01494 FAD binding domain VPUCM_2670 PF01494 FAD binding domain VPUCM_2671 PF03695 Uncharacterised protein family (UPF0149) VPUCM_2672 PF05164 Cell division protein ZapA VPUCM_2673 PF01812 5-formyltetrahydrofolate cyclo-ligase family VPUCM_2674 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) VPUCM_2675 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VPUCM_2675 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VPUCM_2676 PF04402 Protein of unknown function (DUF541) VPUCM_2677 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_2677 PF03466 LysR substrate binding domain VPUCM_2678 PF01810 VPUCM_2678 VPUCM_2679 PF04073 Aminoacyl-tRNA editing domain VPUCM_2680 PF00924 Mechanosensitive ion channel VPUCM_2680 PF05552 Conserved TM helix VPUCM_2681 PF01116 Fructose-bisphosphate aldolase class-II VPUCM_2682 PF00162 Phosphoglycerate kinase VPUCM_2684 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VPUCM_2684 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VPUCM_2685 PF00593 TonB dependent receptor VPUCM_2685 PF07715 TonB-dependent Receptor Plug Domain VPUCM_2686 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_2686 PF03466 LysR substrate binding domain VPUCM_2687 PF00456 Transketolase, thiamine diphosphate binding domain VPUCM_2687 PF02779 Transketolase, pyrimidine binding domain VPUCM_2687 PF02780 Transketolase, C-terminal domain VPUCM_2688 PF00438 S-adenosylmethionine synthetase, N-terminal domain VPUCM_2688 PF02772 S-adenosylmethionine synthetase, central domain VPUCM_2688 PF02773 S-adenosylmethionine synthetase, C-terminal domain VPUCM_2689 PF09955 VPUCM_2689 VPUCM_2690 PF10263 VPUCM_2690 VPUCM_2690 PF17283 VPUCM_2690 VPUCM_2691 PF04231 Endonuclease I VPUCM_2692 PF04452 RNA methyltransferase VPUCM_2693 PF02951 Prokaryotic glutathione synthetase, N-terminal domain VPUCM_2693 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain VPUCM_2694 PF02622 Uncharacterized ACR, COG1678 VPUCM_2695 PF03652 Uncharacterised protein family (UPF0081) VPUCM_2696 PF00437 Type II/IV secretion system protein VPUCM_2697 PF00437 Type II/IV secretion system protein VPUCM_2698 PF01168 Alanine racemase, N-terminal domain VPUCM_2699 PF03807 NADP oxidoreductase coenzyme F420-dependent VPUCM_2699 PF14748 Pyrroline-5-carboxylate reductase dimerisation VPUCM_2700 PF02325 VPUCM_2700 VPUCM_2701 PF02594 Uncharacterised ACR, YggU family COG1872 VPUCM_2702 PF14467 Domain of unknown function (DUF4426) VPUCM_2703 PF01725 Ham1 family VPUCM_2704 PF04055 Radical SAM superfamily VPUCM_2704 PF06969 HemN C-terminal domain VPUCM_2705 PF04960 Glutaminase VPUCM_2706 PF01170 Putative RNA methylase family UPF0020 VPUCM_2707 PF02390 Putative methyltransferase VPUCM_2708 PF00633 Helix-hairpin-helix motif VPUCM_2708 PF00730 HhH-GPD superfamily base excision DNA repair protein VPUCM_2708 PF10576 Iron-sulfur binding domain of endonuclease III VPUCM_2708 PF14815 NUDIX domain VPUCM_2709 PF04362 Bacterial Fe(2+) trafficking VPUCM_2710 PF01464 Transglycosylase SLT domain VPUCM_2710 PF11873 Domain of unknown function (DUF3393) VPUCM_2711 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VPUCM_2711 PF17200 VPUCM_2711 VPUCM_2712 PF00171 Aldehyde dehydrogenase family VPUCM_2715 PF01966 HD domain VPUCM_2715 PF11871 VPUCM_2715 VPUCM_2716 PF00356 Bacterial regulatory proteins, lacI family VPUCM_2716 PF13377 Periplasmic binding protein-like domain VPUCM_2717 PF04794 YdjC-like protein VPUCM_2718 PF02056 Family 4 glycosyl hydrolase VPUCM_2718 PF11975 Family 4 glycosyl hydrolase C-terminal domain VPUCM_2719 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit VPUCM_2720 PF02378 Phosphotransferase system, EIIC VPUCM_2721 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VPUCM_2722 PF01522 Polysaccharide deacetylase VPUCM_2724 PF00872 VPUCM_2724 VPUCM_2727 PF13737 VPUCM_2727 VPUCM_2728 PF08887 VPUCM_2728 VPUCM_2728 PF08906 VPUCM_2728 VPUCM_2729 PF15604 VPUCM_2729 VPUCM_2730 PF00106 short chain dehydrogenase VPUCM_2731 PF10011 Predicted membrane protein (DUF2254) VPUCM_2732 PF06271 VPUCM_2732 VPUCM_2733 PF03739 VPUCM_2733 VPUCM_2734 PF03739 VPUCM_2734 VPUCM_2735 PF00883 Cytosol aminopeptidase family, catalytic domain VPUCM_2735 PF02789 Cytosol aminopeptidase family, N-terminal domain VPUCM_2736 PF04364 DNA polymerase III chi subunit, HolC VPUCM_2737 PF00133 tRNA synthetases class I (I, L, M and V) VPUCM_2737 PF08264 Anticodon-binding domain of tRNA VPUCM_2737 PF10458 Valyl tRNA synthetase tRNA binding arm VPUCM_2739 PF09834 VPUCM_2739 VPUCM_2740 PF00583 Acetyltransferase (GNAT) family VPUCM_2740 PF12802 MarR family VPUCM_2744 PF13354 Beta-lactamase enzyme family VPUCM_2745 PF03235 VPUCM_2745 VPUCM_2749 PF00589 Phage integrase family VPUCM_2750 PF06877 Regulator of ribonuclease activity B VPUCM_2751 PF02274 Amidinotransferase VPUCM_2752 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VPUCM_2752 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VPUCM_2753 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VPUCM_2753 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VPUCM_2754 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain VPUCM_2754 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain VPUCM_2756 PF01042 Endoribonuclease L-PSP VPUCM_2757 PF01553 Acyltransferase VPUCM_2758 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VPUCM_2759 PF01722 BolA-like protein VPUCM_2760 PF13466 STAS domain VPUCM_2761 PF05494 Toluene tolerance, Ttg2 VPUCM_2762 PF02470 VPUCM_2762 VPUCM_2763 PF02405 VPUCM_2763 VPUCM_2764 PF00005 ABC transporter VPUCM_2765 PF01699 Sodium/calcium exchanger protein VPUCM_2766 PF00571 CBS domain VPUCM_2766 PF01380 SIS domain VPUCM_2767 PF06835 Lipopolysaccharide-assembly, LptC-related VPUCM_2768 PF03968 OstA-like protein VPUCM_2769 PF00005 ABC transporter VPUCM_2769 PF12399 Branched-chain amino acid ATP-binding cassette transporter VPUCM_2770 PF00309 VPUCM_2770 VPUCM_2770 PF04552 Sigma-54, DNA binding domain VPUCM_2770 PF04963 Sigma-54 factor, core binding domain VPUCM_2771 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VPUCM_2772 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VPUCM_2773 PF03668 VPUCM_2773 VPUCM_2774 PF00381 PTS HPr component phosphorylation site VPUCM_2775 PF00571 CBS domain VPUCM_2775 PF01769 Divalent cation transporter VPUCM_2775 PF03448 MgtE intracellular N domain VPUCM_2776 PF01523 Putative modulator of DNA gyrase VPUCM_2777 PF04751 Protein of unknown function (DUF615) VPUCM_2778 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VPUCM_2778 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VPUCM_2779 PF00849 RNA pseudouridylate synthase VPUCM_2782 PF00176 SNF2 family N-terminal domain VPUCM_2782 PF00271 Helicase conserved C-terminal domain VPUCM_2782 PF12137 RNA polymerase recycling family C-terminal VPUCM_2784 PF02562 PhoH-like protein VPUCM_2784 PF13638 PIN domain VPUCM_2785 PF01523 Putative modulator of DNA gyrase VPUCM_2786 PF00795 Carbon-nitrogen hydrolase VPUCM_2787 PF13116 VPUCM_2787 VPUCM_2787 PF13502 VPUCM_2787 VPUCM_2788 PF00575 S1 RNA binding domain VPUCM_2788 PF10150 Ribonuclease E/G family VPUCM_2789 PF02545 Maf-like protein VPUCM_2790 PF04093 VPUCM_2790 VPUCM_2791 PF04085 rod shape-determining protein MreC VPUCM_2792 PF06723 MreB/Mbl protein VPUCM_2795 PF07963 Prokaryotic N-terminal methylation motif VPUCM_2796 PF07963 Prokaryotic N-terminal methylation motif VPUCM_2799 PF07963 Prokaryotic N-terminal methylation motif VPUCM_2802 PF00482 Type II secretion system (T2SS), protein F VPUCM_2803 PF00437 Type II/IV secretion system protein VPUCM_2803 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VPUCM_2805 PF13401 AAA domain VPUCM_2806 PF00263 VPUCM_2806 VPUCM_2807 PF07655 VPUCM_2807 VPUCM_2809 PF04612 Type II secretion system (T2SS), protein M VPUCM_2811 PF00563 EAL domain VPUCM_2811 PF00990 GGDEF domain VPUCM_2811 PF17157 VPUCM_2811 VPUCM_2812 PF00436 Single-strand binding protein family VPUCM_2813 PF00196 Bacterial regulatory proteins, luxR family VPUCM_2814 PF00483 Nucleotidyl transferase VPUCM_2815 PF00005 ABC transporter VPUCM_2816 PF04932 VPUCM_2816 VPUCM_2816 PF11846 VPUCM_2816 VPUCM_2816 PF15864 VPUCM_2816 VPUCM_2817 PF00266 Aminotransferase class-V VPUCM_2820 PF00696 Amino acid kinase family VPUCM_2821 PF00809 Pterin binding enzyme VPUCM_2821 PF02310 B12 binding domain VPUCM_2821 PF02574 Homocysteine S-methyltransferase VPUCM_2821 PF02607 B12 binding domain VPUCM_2821 PF02965 Vitamin B12 dependent methionine synthase, activation domain VPUCM_2822 PF00999 Sodium/hydrogen exchanger family VPUCM_2823 PF13592 VPUCM_2823 VPUCM_2825 PF01507 Phosphoadenosine phosphosulfate reductase family VPUCM_2826 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VPUCM_2826 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VPUCM_2827 PF00175 Oxidoreductase NAD-binding domain VPUCM_2827 PF00258 Flavodoxin VPUCM_2827 PF00667 FAD binding domain VPUCM_2829 PF13505 Outer membrane protein beta-barrel domain VPUCM_2830 PF09583 VPUCM_2830 VPUCM_2831 PF01207 Dihydrouridine synthase (Dus) VPUCM_2832 PF01475 Ferric uptake regulator family VPUCM_2833 PF13690 Chemotaxis phosphatase CheX VPUCM_2834 PF00342 Phosphoglucose isomerase VPUCM_2835 PF01894 Uncharacterised protein family UPF0047 VPUCM_2836 PF01103 Surface antigen VPUCM_2837 PF00842 Alanine racemase, C-terminal domain VPUCM_2837 PF01168 Alanine racemase, N-terminal domain VPUCM_2838 PF00772 DnaB-like helicase N terminal domain VPUCM_2838 PF03796 DnaB-like helicase C terminal domain VPUCM_2839 PF04338 Protein of unknown function, DUF481 VPUCM_2840 PF01281 Ribosomal protein L9, N-terminal domain VPUCM_2840 PF03948 Ribosomal protein L9, C-terminal domain VPUCM_2841 PF01084 Ribosomal protein S18 VPUCM_2842 PF00436 Single-strand binding protein family VPUCM_2843 PF01250 Ribosomal protein S6 VPUCM_2844 PF00834 Ribulose-phosphate 3 epimerase family VPUCM_2845 PF02086 D12 class N6 adenine-specific DNA methyltransferase VPUCM_2846 PF05036 Sporulation related domain VPUCM_2846 PF13401 AAA domain VPUCM_2847 PF01761 3-dehydroquinate synthase VPUCM_2848 PF01202 Shikimate kinase VPUCM_2849 PF00263 VPUCM_2849 VPUCM_2849 PF03958 Bacterial type II/III secretion system short domain VPUCM_2850 PF04351 Pilus assembly protein, PilP VPUCM_2851 PF04350 Pilus assembly protein, PilO VPUCM_2852 PF05137 VPUCM_2852 VPUCM_2853 PF11104 Type IV pilus assembly protein PilM; VPUCM_2854 PF00905 Penicillin binding protein transpeptidase domain VPUCM_2854 PF00912 Transglycosylase VPUCM_2854 PF17092 VPUCM_2854 VPUCM_2855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_2855 PF03466 LysR substrate binding domain VPUCM_2856 PF00462 Glutaredoxin VPUCM_2856 PF08534 Redoxin VPUCM_2857 PF12292 VPUCM_2857 VPUCM_2858 PF00206 Lyase VPUCM_2858 PF00583 Acetyltransferase (GNAT) family VPUCM_2858 PF14698 Argininosuccinate lyase C-terminal VPUCM_2859 PF00764 Arginosuccinate synthase VPUCM_2860 PF00696 Amino acid kinase family VPUCM_2861 PF01118 Semialdehyde dehydrogenase, NAD binding domain VPUCM_2861 PF02774 Semialdehyde dehydrogenase, dimerisation domain VPUCM_2862 PF01546 Peptidase family M20/M25/M40 VPUCM_2862 PF07687 Peptidase dimerisation domain VPUCM_2863 PF00311 Phosphoenolpyruvate carboxylase VPUCM_2864 PF03551 Transcriptional regulator PadR-like family VPUCM_2864 PF10400 Virulence activator alpha C-term VPUCM_2865 PF02219 Methylenetetrahydrofolate reductase VPUCM_2866 PF00696 Amino acid kinase family VPUCM_2866 PF00742 Homoserine dehydrogenase VPUCM_2866 PF03447 Homoserine dehydrogenase, NAD binding domain VPUCM_2867 PF01053 Cys/Met metabolism PLP-dependent enzyme VPUCM_2868 PF01340 Met Apo-repressor, MetJ VPUCM_2869 PF00390 Malic enzyme, N-terminal domain VPUCM_2869 PF03949 Malic enzyme, NAD binding domain VPUCM_2870 PF00210 Ferritin-like domain VPUCM_2871 PF00009 Elongation factor Tu GTP binding domain VPUCM_2871 PF03143 Elongation factor Tu C-terminal domain VPUCM_2871 PF03144 Elongation factor Tu domain 2 VPUCM_2872 PF00009 Elongation factor Tu GTP binding domain VPUCM_2872 PF00679 Elongation factor G C-terminus VPUCM_2872 PF03144 Elongation factor Tu domain 2 VPUCM_2872 PF03764 Elongation factor G, domain IV VPUCM_2872 PF14492 Elongation Factor G, domain II VPUCM_2873 PF00177 Ribosomal protein S7p/S5e VPUCM_2874 PF00164 Ribosomal protein S12/S23 VPUCM_2875 PF04077 DsrH like protein VPUCM_2876 PF02635 DsrE/DsrF-like family VPUCM_2877 PF02635 DsrE/DsrF-like family VPUCM_2878 PF08348 VPUCM_2878 VPUCM_2878 PF13309 VPUCM_2878 VPUCM_2879 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VPUCM_2879 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VPUCM_2880 PF13360 PQQ-like domain VPUCM_2881 PF04102 SlyX VPUCM_2882 PF01112 Asparaginase VPUCM_2883 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VPUCM_2884 PF09526 VPUCM_2884 VPUCM_2885 PF00999 Sodium/hydrogen exchanger family VPUCM_2885 PF02254 TrkA-N domain VPUCM_2886 PF02525 Flavodoxin-like fold VPUCM_2887 PF00005 ABC transporter VPUCM_2887 PF12848 ABC transporter VPUCM_2888 PF09523 VPUCM_2888 VPUCM_2889 PF00561 alpha/beta hydrolase fold VPUCM_2890 PF06794 Uncharacterised protein family (UPF0270) VPUCM_2891 PF00485 Phosphoribulokinase / Uridine kinase family VPUCM_2892 PF00027 Cyclic nucleotide-binding domain VPUCM_2892 PF00325 Bacterial regulatory proteins, crp family VPUCM_2893 PF07063 Domain of unknown function (DUF1338) VPUCM_2894 PF00171 Aldehyde dehydrogenase family VPUCM_2895 PF04958 Arginine N-succinyltransferase beta subunit VPUCM_2896 PF00202 Aminotransferase class-III VPUCM_2898 PF00117 Glutamine amidotransferase class-I VPUCM_2899 PF00932 Lamin Tail Domain VPUCM_2899 PF03372 Endonuclease/Exonuclease/phosphatase family VPUCM_2901 PF00579 tRNA synthetases class I (W and Y) VPUCM_2902 PF13419 Haloacid dehalogenase-like hydrolase VPUCM_2903 PF00588 SpoU rRNA Methylase family VPUCM_2903 PF08032 RNA 2'-O ribose methyltransferase substrate binding VPUCM_2904 PF00575 S1 RNA binding domain VPUCM_2904 PF00773 RNB domain VPUCM_2904 PF08206 Ribonuclease B OB domain VPUCM_2904 PF08461 Ribonuclease R winged-helix domain VPUCM_2905 PF02082 Transcriptional regulator VPUCM_2906 PF00042 Globin VPUCM_2906 PF00175 Oxidoreductase NAD-binding domain VPUCM_2906 PF00970 Oxidoreductase FAD-binding domain VPUCM_2907 PF08238 Sel1 repeat VPUCM_2908 PF00709 Adenylosuccinate synthetase VPUCM_2909 PF09838 VPUCM_2909 VPUCM_2910 PF01145 SPFH domain / Band 7 family VPUCM_2911 PF01145 SPFH domain / Band 7 family VPUCM_2911 PF12221 VPUCM_2911 VPUCM_2912 PF01926 50S ribosome-binding GTPase VPUCM_2912 PF13167 VPUCM_2912 VPUCM_2912 PF16360 VPUCM_2912 VPUCM_2913 PF17209 VPUCM_2913 VPUCM_2914 PF01715 IPP transferase VPUCM_2915 PF01119 DNA mismatch repair protein, C-terminal domain VPUCM_2915 PF08676 MutL C terminal dimerisation domain VPUCM_2915 PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_2916 PF01476 LysM domain VPUCM_2916 PF01520 N-acetylmuramoyl-L-alanine amidase VPUCM_2917 PF02367 Uncharacterised P-loop hydrolase UPF0079 VPUCM_2918 PF08331 VPUCM_2918 VPUCM_2918 PF13484 VPUCM_2918 VPUCM_2919 PF00929 Exonuclease VPUCM_2920 PF03193 Protein of unknown function, DUF258 VPUCM_2921 PF02666 VPUCM_2921 VPUCM_2922 PF00939 Sodium:sulfate symporter transmembrane region VPUCM_2924 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VPUCM_2924 PF00672 HAMP domain VPUCM_2924 PF02743 Cache domain VPUCM_2925 PF00892 EamA-like transporter family VPUCM_2926 PF01676 Metalloenzyme superfamily VPUCM_2926 PF06415 BPG-independent PGAM N-terminus (iPGM_N) VPUCM_2928 PF00581 Rhodanese-like domain VPUCM_2929 PF02556 Preprotein translocase subunit SecB VPUCM_2930 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus VPUCM_2930 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus VPUCM_2931 PF00132 Bacterial transferase hexapeptide (six repeats) VPUCM_2931 PF06426 Serine acetyltransferase, N-terminal VPUCM_2932 PF01551 Peptidase family M23 VPUCM_2934 PF00440 Bacterial regulatory proteins, tetR family VPUCM_2934 PF13972 Bacterial transcriptional repressor VPUCM_2935 PF04892 VPUCM_2935 VPUCM_2936 PF00152 tRNA synthetases class II (D, K and N) VPUCM_2938 PF00890 FAD binding domain VPUCM_2938 PF02910 Fumarate reductase flavoprotein C-term VPUCM_2939 PF13085 2Fe-2S iron-sulfur cluster binding domain VPUCM_2939 PF13183 4Fe-4S dicluster domain VPUCM_2940 PF02300 Fumarate reductase subunit C VPUCM_2941 PF02313 Fumarate reductase subunit D VPUCM_2942 PF01145 SPFH domain / Band 7 family VPUCM_2943 PF01132 Elongation factor P (EF-P) OB domain VPUCM_2943 PF08207 Elongation factor P (EF-P) KOW-like domain VPUCM_2943 PF09285 Elongation factor P, C-terminal VPUCM_2944 PF04055 Radical SAM superfamily VPUCM_2944 PF13353 4Fe-4S single cluster domain VPUCM_2947 PF00842 Alanine racemase, C-terminal domain VPUCM_2947 PF01168 Alanine racemase, N-terminal domain VPUCM_2948 PF02308 VPUCM_2948 VPUCM_2950 PF00118 TCP-1/cpn60 chaperonin family VPUCM_2951 PF00166 Chaperonin 10 Kd subunit VPUCM_2952 PF01554 MatE VPUCM_2953 PF00365 Phosphofructokinase VPUCM_2954 PF01545 Cation efflux family VPUCM_2954 PF16916 VPUCM_2954 VPUCM_2955 PF07813 LTXXQ motif family protein VPUCM_2956 PF00072 Response regulator receiver domain VPUCM_2956 PF00486 Transcriptional regulatory protein, C terminal VPUCM_2957 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_2957 PF00672 HAMP domain VPUCM_2957 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_2957 PF16527 VPUCM_2957 VPUCM_2958 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VPUCM_2958 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VPUCM_2959 PF00588 SpoU rRNA Methylase family VPUCM_2960 PF04186 VPUCM_2960 VPUCM_2961 PF00206 Lyase VPUCM_2961 PF10415 Fumarase C C-terminus VPUCM_2962 PF03605 VPUCM_2962 VPUCM_2963 PF02683 VPUCM_2963 VPUCM_2963 PF11412 Disulphide bond corrector protein DsbC VPUCM_2963 PF13899 Thioredoxin-like VPUCM_2964 PF00072 Response regulator receiver domain VPUCM_2964 PF00196 Bacterial regulatory proteins, luxR family VPUCM_2965 PF00999 Sodium/hydrogen exchanger family VPUCM_2965 PF02080 TrkA-C domain VPUCM_2965 PF03471 Transporter associated domain VPUCM_2967 PF13937 VPUCM_2967 VPUCM_2968 PF00474 Sodium:solute symporter family VPUCM_2971 PF00206 Lyase VPUCM_2971 PF10415 Fumarase C C-terminus VPUCM_2972 PF00072 Response regulator receiver domain VPUCM_2972 PF00512 His Kinase A (phospho-acceptor) domain VPUCM_2972 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VPUCM_2972 PF12860 VPUCM_2972 VPUCM_2973 PF12832 MFS_1 like family VPUCM_2974 PF00027 Cyclic nucleotide-binding domain VPUCM_2974 PF03445 VPUCM_2974 VPUCM_2974 PF10335 VPUCM_2974 VPUCM_2975 PF00929 Exonuclease VPUCM_2976 PF00501 AMP-binding enzyme VPUCM_2976 PF13193 AMP-binding enzyme C-terminal domain VPUCM_2976 PF16177 VPUCM_2976 VPUCM_2977 PF01220 Dehydroquinase class II VPUCM_2978 PF00364 Biotin-requiring enzyme VPUCM_2979 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain VPUCM_2979 PF02785 Biotin carboxylase C-terminal domain VPUCM_2979 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VPUCM_2980 PF06325 Ribosomal protein L11 methyltransferase (PrmA) VPUCM_2981 PF01207 Dihydrouridine synthase (Dus) VPUCM_2982 PF02954 Bacterial regulatory protein, Fis family VPUCM_2983 PF07690 Major Facilitator Superfamily VPUCM_2984 PF00005 ABC transporter VPUCM_2984 PF12848 ABC transporter VPUCM_2985 PF00990 GGDEF domain VPUCM_2987 PF01276 Orn/Lys/Arg decarboxylase, major domain VPUCM_2987 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain VPUCM_2987 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain VPUCM_2988 PF13520 Amino acid permease VPUCM_2989 PF00486 Transcriptional regulatory protein, C terminal VPUCM_2991 PF13411 MerR HTH family regulatory protein VPUCM_2993 PF01808 AICARFT/IMPCHase bienzyme VPUCM_2993 PF02142 MGS-like domain VPUCM_2994 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain VPUCM_2994 PF02843 Phosphoribosylglycinamide synthetase, C domain VPUCM_2994 PF02844 Phosphoribosylglycinamide synthetase, N domain VPUCM_2995 PF07356 VPUCM_2995 VPUCM_2996 PF00216 Bacterial DNA-binding protein VPUCM_2997 PF00571 CBS domain VPUCM_2997 PF01595 VPUCM_2997 VPUCM_2998 PF04222 Protein of unknown function (DUF416) VPUCM_2999 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VPUCM_3000 PF03167 Uracil DNA glycosylase superfamily VPUCM_3001 PF01208 Uroporphyrinogen decarboxylase (URO-D) VPUCM_3004 PF00293 NUDIX domain VPUCM_3004 PF09297 NADH pyrophosphatase zinc ribbon domain VPUCM_3005 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ VPUCM_3006 PF00623 RNA polymerase Rpb1, domain 2 VPUCM_3006 PF04983 RNA polymerase Rpb1, domain 3 VPUCM_3006 PF04997 RNA polymerase Rpb1, domain 1 VPUCM_3006 PF04998 RNA polymerase Rpb1, domain 5 VPUCM_3006 PF05000 RNA polymerase Rpb1, domain 4 VPUCM_3007 PF00562 RNA polymerase Rpb2, domain 6 VPUCM_3007 PF04560 RNA polymerase Rpb2, domain 7 VPUCM_3007 PF04561 RNA polymerase Rpb2, domain 2 VPUCM_3007 PF04563 RNA polymerase beta subunit VPUCM_3007 PF04565 RNA polymerase Rpb2, domain 3 VPUCM_3007 PF10385 RNA polymerase beta subunit external 1 domain VPUCM_3008 PF00542 Ribosomal protein L7/L12 C-terminal domain VPUCM_3008 PF16320 VPUCM_3008 VPUCM_3009 PF00466 Ribosomal protein L10 VPUCM_3010 PF00687 Ribosomal protein L1p/L10e family VPUCM_3011 PF00298 Ribosomal protein L11, RNA binding domain VPUCM_3011 PF03946 Ribosomal protein L11, N-terminal domain VPUCM_3012 PF00467 KOW motif VPUCM_3012 PF02357 Transcription termination factor nusG VPUCM_3013 PF00584 SecE/Sec61-gamma subunits of protein translocation complex VPUCM_3014 PF00009 Elongation factor Tu GTP binding domain VPUCM_3014 PF03143 Elongation factor Tu C-terminal domain VPUCM_3014 PF03144 Elongation factor Tu domain 2 VPUCM_3015 PF00485 Phosphoribulokinase / Uridine kinase family VPUCM_3016 PF02237 Biotin protein ligase C terminal domain VPUCM_3016 PF03099 Biotin/lipoate A/B protein ligase family VPUCM_3016 PF08279 HTH domain VPUCM_3017 PF01565 FAD binding domain VPUCM_3017 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain VPUCM_3018 PF13673 Acetyltransferase (GNAT) domain VPUCM_3019 PF13091 PLD-like domain VPUCM_3021 PF00076 RNA recognition motif VPUCM_3022 PF01177 Asp/Glu/Hydantoin racemase VPUCM_3023 PF01902 ATP-binding region VPUCM_3024 PF00593 TonB dependent receptor VPUCM_3024 PF07715 TonB-dependent Receptor Plug Domain VPUCM_3025 PF05958 tRNA (Uracil-5-)-methyltransferase VPUCM_3026 PF07226 VPUCM_3026 VPUCM_3027 PF00440 Bacterial regulatory proteins, tetR family VPUCM_3028 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VPUCM_3028 PF07992 Pyridine nucleotide-disulphide oxidoreductase VPUCM_3029 PF01554 MatE VPUCM_3030 PF04072 Leucine carboxyl methyltransferase VPUCM_3031 PF00717 Peptidase S24-like VPUCM_3031 PF01726 LexA DNA binding domain VPUCM_3032 PF01553 Acyltransferase VPUCM_3033 PF01040 UbiA prenyltransferase family VPUCM_3034 PF04345 Chorismate lyase VPUCM_3035 PF03748 VPUCM_3035 VPUCM_3036 PF01694 Rhomboid family VPUCM_3036 PF12122 Protein of unknown function (DUF3582) VPUCM_3037 PF00581 Rhodanese-like domain VPUCM_3038 PF00140 Sigma-70 factor, region 1 VPUCM_3038 PF04542 Sigma-70 region 2 VPUCM_3038 PF04545 Sigma-70, region 4 VPUCM_3040 PF00005 ABC transporter VPUCM_3041 PF00448 SRP54-type protein, GTPase domain VPUCM_3041 PF02881 SRP54-type protein, helical bundle domain VPUCM_3042 PF03602 Conserved hypothetical protein 95 VPUCM_3043 PF06611 VPUCM_3043 VPUCM_3044 PF01914 VPUCM_3044 VPUCM_3045 PF10678 VPUCM_3045 VPUCM_3046 PF07947 VPUCM_3046 VPUCM_3048 PF13643 VPUCM_3048 VPUCM_3049 PF10694 Protein of unknown function (DUF2500) VPUCM_3050 PF01757 VPUCM_3050 VPUCM_3051 PF00031 Cystatin domain VPUCM_3052 PF07690 Major Facilitator Superfamily VPUCM_3053 PF05706 Cyclin-dependent kinase inhibitor 3 (CDKN3) VPUCM_3054 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VPUCM_3054 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VPUCM_3055 PF01022 Bacterial regulatory protein, arsR family VPUCM_3056 PF00563 EAL domain VPUCM_3056 PF08668 HDOD domain VPUCM_3057 PF01810 VPUCM_3057 VPUCM_3058 PF12146 Putative lysophospholipase VPUCM_3059 PF08282 haloacid dehalogenase-like hydrolase VPUCM_3060 PF01878 EVE domain VPUCM_3062 PF03942 VPUCM_3062 VPUCM_3063 PF00563 EAL domain VPUCM_3063 PF00990 GGDEF domain VPUCM_3063 PF08495 VPUCM_3063 VPUCM_3063 PF10442 VPUCM_3063 VPUCM_3064 PF13419 Haloacid dehalogenase-like hydrolase VPUCM_3065 PF00589 Phage integrase family VPUCM_3065 PF02899 Phage integrase, N-terminal SAM-like domain VPUCM_3066 PF04340 Protein of unknown function, DUF484 VPUCM_3067 PF01678 Diaminopimelate epimerase VPUCM_3068 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain VPUCM_3068 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VPUCM_3069 PF13627 VPUCM_3069 VPUCM_3070 PF01491 Frataxin-like domain VPUCM_3071 PF01295 VPUCM_3071 VPUCM_3071 PF12633 VPUCM_3071 VPUCM_3072 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain VPUCM_3072 PF03900 Porphobilinogen deaminase, C-terminal domain VPUCM_3073 PF02602 Uroporphyrinogen-III synthase HemD VPUCM_3074 PF04375 VPUCM_3074 VPUCM_3075 PF07219 VPUCM_3075 VPUCM_3077 PF00175 Oxidoreductase NAD-binding domain VPUCM_3077 PF00970 Oxidoreductase FAD-binding domain VPUCM_3078 PF00111 2Fe-2S iron-sulfur cluster binding domain VPUCM_3079 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase VPUCM_3081 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VPUCM_3081 PF07497 Rho termination factor, RNA-binding domain VPUCM_3081 PF07498 Rho termination factor, N-terminal domain VPUCM_3082 PF00085 Thioredoxin VPUCM_3083 PF00270 DEAD/DEAH box helicase VPUCM_3083 PF00271 Helicase conserved C-terminal domain VPUCM_3084 PF02541 Ppx/GppA phosphatase family VPUCM_3085 PF02592 VPUCM_3085 VPUCM_3086 PF12305 VPUCM_3086 VPUCM_3087 PF00270 DEAD/DEAH box helicase VPUCM_3087 PF00271 Helicase conserved C-terminal domain VPUCM_3087 PF00570 HRDC domain VPUCM_3087 PF09382 RQC domain VPUCM_3087 PF16124 VPUCM_3087 VPUCM_3088 PF00892 EamA-like transporter family VPUCM_3089 PF02311 AraC-like ligand binding domain VPUCM_3089 PF12833 Helix-turn-helix domain VPUCM_3090 PF01810 VPUCM_3090 VPUCM_3091 PF01019 Gamma-glutamyltranspeptidase VPUCM_3092 PF00580 UvrD/REP helicase N-terminal domain VPUCM_3092 PF13361 UvrD-like helicase C-terminal domain VPUCM_3093 PF10048 VPUCM_3093 VPUCM_3094 PF05114 Protein of unknown function (DUF692) VPUCM_3095 PF09836 Uncharacterized protein conserved in bacteria (DUF2063) VPUCM_3096 PF07681 VPUCM_3096 VPUCM_3098 PF07690 Major Facilitator Superfamily VPUCM_3099 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_3099 PF03466 LysR substrate binding domain VPUCM_3100 PF00557 Metallopeptidase family M24 VPUCM_3100 PF01321 Creatinase/Prolidase N-terminal domain VPUCM_3100 PF16188 VPUCM_3100 VPUCM_3100 PF16189 VPUCM_3100 VPUCM_3101 PF04055 Radical SAM superfamily VPUCM_3101 PF06968 Biotin and Thiamin Synthesis associated domain VPUCM_3102 PF05690 Thiazole biosynthesis protein ThiG VPUCM_3103 PF02597 ThiS family VPUCM_3104 PF00899 ThiF family VPUCM_3105 PF02581 Thiamine monophosphate synthase/TENI VPUCM_3106 PF01964 ThiC family VPUCM_3106 PF13667 ThiC-associated domain VPUCM_3107 PF02537 VPUCM_3107 VPUCM_3109 PF13592 VPUCM_3109 VPUCM_3111 PF00132 Bacterial transferase hexapeptide (six repeats) VPUCM_3112 PF07369 Protein of unknown function (DUF1488) VPUCM_3113 PF01488 Shikimate / quinate 5-dehydrogenase VPUCM_3113 PF08501 Shikimate dehydrogenase substrate binding domain VPUCM_3114 PF01218 Coproporphyrinogen III oxidase VPUCM_3115 PF01300 Telomere recombination VPUCM_3116 PF00731 AIR carboxylase VPUCM_3117 PF02222 ATP-grasp domain VPUCM_3118 PF01396 VPUCM_3118 VPUCM_3120 PF04361 VPUCM_3120 VPUCM_3121 PF02481 DNA recombination-mediator protein A VPUCM_3122 PF01476 LysM domain VPUCM_3123 PF01327 Polypeptide deformylase VPUCM_3124 PF00551 Formyl transferase VPUCM_3124 PF02911 Formyl transferase, C-terminal domain VPUCM_3125 PF01029 NusB family VPUCM_3125 PF01189 NOL1/NOP2/sun family VPUCM_3126 PF02080 TrkA-C domain VPUCM_3126 PF02254 TrkA-N domain VPUCM_3127 PF02386 Cation transport protein VPUCM_3128 PF11355 VPUCM_3128 VPUCM_3129 PF03006 VPUCM_3129 VPUCM_3130 PF07070 VPUCM_3130 VPUCM_3133 PF06288 Protein of unknown function (DUF1040) VPUCM_3134 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase VPUCM_3134 PF12801 VPUCM_3134 VPUCM_3134 PF13746 4Fe-4S dicluster domain VPUCM_3135 PF01636 Phosphotransferase enzyme family VPUCM_3136 PF01323 DSBA-like thioredoxin domain VPUCM_3137 PF01553 Acyltransferase VPUCM_3138 PF11059 VPUCM_3138 VPUCM_3139 PF01078 Magnesium chelatase, subunit ChlI VPUCM_3139 PF13335 VPUCM_3139 VPUCM_3139 PF13541 Subunit ChlI of Mg-chelatase VPUCM_3140 PF00205 Thiamine pyrophosphate enzyme, central domain VPUCM_3140 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VPUCM_3140 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VPUCM_3141 PF13710 ACT domain VPUCM_3142 PF01063 Aminotransferase class IV VPUCM_3143 PF00920 Dehydratase family VPUCM_3144 PF00291 Pyridoxal-phosphate dependent enzyme VPUCM_3144 PF00585 C-terminal regulatory domain of Threonine dehydratase VPUCM_3145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VPUCM_3145 PF03466 LysR substrate binding domain VPUCM_3146 PF07690 Major Facilitator Superfamily VPUCM_3147 PF00497 Bacterial extracellular solute-binding proteins, family 3 VPUCM_3148 PF00528 Binding-protein-dependent transport system inner membrane component VPUCM_3149 PF00132 Bacterial transferase hexapeptide (six repeats) VPUCM_3149 PF12804 MobA-like NTP transferase domain VPUCM_3150 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain VPUCM_3150 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain VPUCM_3151 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VPUCM_3151 PF02874 ATP synthase alpha/beta family, beta-barrel domain VPUCM_3152 PF00231 ATP synthase VPUCM_3153 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VPUCM_3153 PF00306 ATP synthase alpha/beta chain, C terminal domain VPUCM_3153 PF02874 ATP synthase alpha/beta family, beta-barrel domain VPUCM_3154 PF00213 ATP synthase delta (OSCP) subunit VPUCM_3155 PF00430 ATP synthase B/B' CF(0) VPUCM_3156 PF00137 ATP synthase subunit C VPUCM_3157 PF00119 ATP synthase A chain VPUCM_3158 PF03899 VPUCM_3158 VPUCM_3159 PF02195 ParB-like nuclease domain VPUCM_3160 PF13614 AAA domain VPUCM_3161 PF02527 rRNA small subunit methyltransferase G VPUCM_3162 PF01134 Glucose inhibited division protein A VPUCM_3162 PF13932 GidA associated domain 3 VPUCM_p0001 PF00145 C-5 cytosine-specific DNA methylase VPUCM_p0003 PF00589 Phage integrase family VPUCM_p0009 PF04014 Antidote-toxin recognition MazE VPUCM_p0013 PF00717 Peptidase S24-like VPUCM_p0014 PF00817 impB/mucB/samB family VPUCM_p0014 PF11799 impB/mucB/samB family C-terminal domain VPUCM_p0014 PF13438 VPUCM_p0014 VPUCM_p0038 PF00589 Phage integrase family VPUCM_p0050 PF00563 EAL domain VPUCM_p0052 PF13614 AAA domain VPUCM_p0053 PF02195 ParB-like nuclease domain VPUCM_p0057 PF01131 DNA topoisomerase VPUCM_p0057 PF01751 Toprim domain VPUCM_p0063 PF11072 VPUCM_p0063 VPUCM_p0064 PF12696 TraM recognition site of TraD and TraG VPUCM_p0065 PF14348 VPUCM_p0065 VPUCM_p0069 PF11990 VPUCM_p0069 VPUCM_p0070 PF11444 VPUCM_p0070 VPUCM_p0074 PF11130 VPUCM_p0074 VPUCM_p0075 PF07511 VPUCM_p0075 VPUCM_p0076 PF06834 VPUCM_p0076 VPUCM_p0079 PF07916 VPUCM_p0079 VPUCM_p0092 PF12083 VPUCM_p0092 VPUCM_p0103 PF00263 VPUCM_p0103 VPUCM_p0106 PF00437 Type II/IV secretion system protein VPUCM_p0111 PF03160 Calx-beta domain