locus-tag class description JHT21_00005 PF00308 Bacterial dnaA protein JHT21_00005 PF08299 Bacterial dnaA protein helix-turn-helix JHT21_00005 PF11638 DnaA N-terminal domain JHT21_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain JHT21_00010 PF02767 DNA polymerase III beta subunit, central domain JHT21_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain JHT21_00015 PF02463 RecF/RecN/SMC N terminal domain JHT21_00020 PF00204 DNA gyrase B JHT21_00020 PF00986 DNA gyrase B subunit, carboxyl terminus JHT21_00020 PF18053 DNA gyrase B subunit insert domain JHT21_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_00020 PF01751 Toprim domain JHT21_00030 PF00011 Hsp20/alpha crystallin family JHT21_00035 PF00155 Aminotransferase class I and II JHT21_00040 PF00128 Alpha amylase, catalytic domain JHT21_00045 PF05746 DALR anticodon binding domain JHT21_00045 PF02092 Glycyl-tRNA synthetase beta subunit JHT21_00050 PF02091 Glycyl-tRNA synthetase alpha subunit JHT21_00055 PF01169 Uncharacterized protein family UPF0016 JHT21_00065 PF01206 Sulfurtransferase TusA JHT21_00075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_00075 PF03466 LysR substrate binding domain JHT21_00080 PF08240 Alcohol dehydrogenase GroES-like domain JHT21_00080 PF00107 Zinc-binding dehydrogenase JHT21_00085 PF00108 Thiolase, N-terminal domain JHT21_00085 PF02803 Thiolase, C-terminal domain JHT21_00090 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JHT21_00090 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JHT21_00090 PF00378 Enoyl-CoA hydratase/isomerase JHT21_00095 PF09186 Domain of unknown function (DUF1949) JHT21_00095 PF01205 Uncharacterized protein family UPF0029 JHT21_00100 PF02386 Cation transport protein JHT21_00105 PF12724 Flavodoxin domain JHT21_00135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_00135 PF03466 LysR substrate binding domain JHT21_00140 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JHT21_00140 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JHT21_00145 PF04380 Membrane fusogenic activity JHT21_00150 PF00873 AcrB/AcrD/AcrF family JHT21_00155 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JHT21_00160 PF16295 Tetracyclin repressor-like, C-terminal domain JHT21_00160 PF00440 Bacterial regulatory proteins, tetR family JHT21_00165 PF00580 UvrD/REP helicase N-terminal domain JHT21_00165 PF13361 UvrD-like helicase C-terminal domain JHT21_00170 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JHT21_00200 PF13419 Haloacid dehalogenase-like hydrolase JHT21_00205 PF00005 ABC transporter JHT21_00205 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JHT21_00210 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JHT21_00215 PF00528 Binding-protein-dependent transport system inner membrane component JHT21_00220 PF00528 Binding-protein-dependent transport system inner membrane component JHT21_00220 PF12911 N-terminal TM domain of oligopeptide transport permease C JHT21_00250 PF00069 Protein kinase domain JHT21_00255 PF00356 Bacterial regulatory proteins, lacI family JHT21_00255 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JHT21_00260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_00260 PF03466 LysR substrate binding domain JHT21_00265 PF00893 Small Multidrug Resistance protein JHT21_00270 PF00893 Small Multidrug Resistance protein JHT21_00275 PF00920 Dehydratase family JHT21_00280 PF01202 Shikimate kinase JHT21_00285 PF02447 GntP family permease JHT21_00290 PF01081 KDPG and KHG aldolase JHT21_00295 PF01048 Phosphorylase superfamily JHT21_00300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_00300 PF03466 LysR substrate binding domain JHT21_00305 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHT21_00305 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JHT21_00310 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ JHT21_00315 PF01432 Peptidase family M3 JHT21_00320 PF01037 Lrp/AsnC ligand binding domain JHT21_00325 PF00563 EAL domain JHT21_00325 PF00990 Diguanylate cyclase, GGDEF domain JHT21_00325 PF08448 PAS fold JHT21_00330 PF04445 Putative SAM-dependent methyltransferase JHT21_00340 PF00892 EamA-like transporter family JHT21_00345 PF00582 Universal stress protein family JHT21_00350 PF00210 Ferritin-like domain JHT21_00355 PF10625 Universal stress protein B (UspB) JHT21_00365 PF01590 GAF domain JHT21_00365 PF00158 Sigma-54 interaction domain JHT21_00365 PF02954 Bacterial regulatory protein, Fis family JHT21_00420 PF01594 AI-2E family transporter JHT21_00425 PF03707 Bacterial signalling protein N terminal repeat JHT21_00425 PF00990 Diguanylate cyclase, GGDEF domain JHT21_00425 PF00563 EAL domain JHT21_00435 PF02646 RmuC family JHT21_00440 PF01209 ubiE/COQ5 methyltransferase family JHT21_00445 PF02036 SCP-2 sterol transfer family JHT21_00450 PF03109 ABC1 family JHT21_00455 PF02416 mttA/Hcf106 family JHT21_00460 PF02416 mttA/Hcf106 family JHT21_00465 PF00902 Sec-independent protein translocase protein (TatC) JHT21_00470 PF01026 TatD related DNase JHT21_00475 PF00490 Delta-aminolevulinic acid dehydratase JHT21_00490 PF01367 5'-3' exonuclease, C-terminal SAM fold JHT21_00490 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JHT21_00490 PF00476 DNA polymerase family A JHT21_00490 PF01612 3'-5' exonuclease JHT21_00495 PF01926 50S ribosome-binding GTPase JHT21_00500 PF00034 Cytochrome c JHT21_00510 PF04220 Der GTPase activator (YihI) JHT21_00515 PF10675 Protein of unknown function (DUF2489) JHT21_00520 PF06969 HemN C-terminal domain JHT21_00520 PF04055 Radical SAM superfamily JHT21_00525 PF00962 Adenosine/AMP deaminase JHT21_00530 PF03707 Bacterial signalling protein N terminal repeat JHT21_00530 PF00990 Diguanylate cyclase, GGDEF domain JHT21_00530 PF00563 EAL domain JHT21_00535 PF02954 Bacterial regulatory protein, Fis family JHT21_00535 PF00072 Response regulator receiver domain JHT21_00535 PF00158 Sigma-54 interaction domain JHT21_00540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_00540 PF00512 His Kinase A (phospho-acceptor) domain JHT21_00540 PF00989 PAS fold JHT21_00550 PF03951 Glutamine synthetase, beta-Grasp domain JHT21_00550 PF00120 Glutamine synthetase, catalytic domain JHT21_00555 PF00009 Elongation factor Tu GTP binding domain JHT21_00555 PF00679 Elongation factor G C-terminus JHT21_00555 PF03144 Elongation factor Tu domain 2 JHT21_00570 PF03631 Virulence factor BrkB JHT21_00575 PF02580 D-Tyr-tRNA(Tyr) deacylase JHT21_00580 PF00583 Acetyltransferase (GNAT) family JHT21_00580 PF09500 Putative thioesterase (yiiD_Cterm) JHT21_00590 PF01293 Phosphoenolpyruvate carboxykinase JHT21_00595 PF01430 Hsp33 protein JHT21_00600 PF01479 S4 domain JHT21_00605 PF11356 Type II secretion system protein C JHT21_00610 PF03958 Bacterial type II/III secretion system short domain JHT21_00610 PF00263 Bacterial type II and III secretion system protein JHT21_00615 PF00437 Type II/IV secretion system protein JHT21_00620 PF00482 Type II secretion system (T2SS), protein F JHT21_00625 PF08334 Type II secretion system (T2SS), protein G JHT21_00625 PF07963 Prokaryotic N-terminal methylation motif JHT21_00630 PF12019 Type II transport protein GspH JHT21_00635 PF02501 Type II secretion system (T2SS), protein I JHT21_00635 PF07963 Prokaryotic N-terminal methylation motif JHT21_00640 PF11612 Type II secretion system (T2SS), protein J JHT21_00640 PF07963 Prokaryotic N-terminal methylation motif JHT21_00645 PF03934 Type II secretion system (T2SS), protein K JHT21_00650 PF12693 GspL periplasmic domain JHT21_00650 PF05134 Type II secretion system (T2SS), protein L JHT21_00655 PF04612 Type II secretion system (T2SS), protein M JHT21_00660 PF01203 Type II secretion system (T2SS), protein N JHT21_00665 PF00459 Inositol monophosphatase family JHT21_00670 PF00293 NUDIX domain JHT21_00675 PF01521 Iron-sulphur cluster biosynthesis JHT21_00675 PF01106 NifU-like domain JHT21_00680 PF00156 Phosphoribosyl transferase domain JHT21_00685 PF00561 alpha/beta hydrolase fold JHT21_00695 PF17674 HHH domain JHT21_00695 PF00575 S1 RNA binding domain JHT21_00695 PF09371 Tex-like protein N-terminal domain JHT21_00695 PF16921 Tex protein YqgF-like domain JHT21_00705 PF01272 Transcription elongation factor, GreA/GreB, C-term JHT21_00705 PF03449 Transcription elongation factor, N-terminal JHT21_00715 PF00072 Response regulator receiver domain JHT21_00715 PF00486 Transcriptional regulatory protein, C terminal JHT21_00720 PF00512 His Kinase A (phospho-acceptor) domain JHT21_00720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_00720 PF00672 HAMP domain JHT21_00725 PF00860 Permease family JHT21_00730 PF17191 RecG wedge domain JHT21_00730 PF00271 Helicase conserved C-terminal domain JHT21_00730 PF00270 DEAD/DEAH box helicase JHT21_00735 PF00588 SpoU rRNA Methylase family JHT21_00735 PF12105 SpoU, rRNA methylase, C-terminal JHT21_00740 PF02824 TGS domain JHT21_00740 PF04607 Region found in RelA / SpoT proteins JHT21_00740 PF13291 ACT domain JHT21_00745 PF01192 RNA polymerase Rpb6 JHT21_00750 PF00625 Guanylate kinase JHT21_00765 PF02472 Biopolymer transport protein ExbD/TolR JHT21_00770 PF01618 MotA/TolQ/ExbB proton channel family JHT21_00785 PF00593 TonB dependent receptor JHT21_00785 PF07715 TonB-dependent Receptor Plug Domain JHT21_00790 PF00528 Binding-protein-dependent transport system inner membrane component JHT21_00795 PF00528 Binding-protein-dependent transport system inner membrane component JHT21_00795 PF12911 N-terminal TM domain of oligopeptide transport permease C JHT21_00800 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JHT21_00805 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JHT21_00805 PF00005 ABC transporter JHT21_00810 PF00005 ABC transporter JHT21_00810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JHT21_00820 PF00563 EAL domain JHT21_00820 PF13426 PAS domain JHT21_00820 PF00990 Diguanylate cyclase, GGDEF domain JHT21_00875 PF04138 GtrA-like protein JHT21_00880 PF00535 Glycosyl transferase family 2 JHT21_00890 PF08340 Domain of unknown function (DUF1732) JHT21_00890 PF03755 YicC-like family, N-terminal region JHT21_00895 PF03725 3' exoribonuclease family, domain 2 JHT21_00895 PF01138 3' exoribonuclease family, domain 1 JHT21_00900 PF00156 Phosphoribosyl transferase domain JHT21_00905 PF03279 Bacterial lipid A biosynthesis acyltransferase JHT21_00910 PF00440 Bacterial regulatory proteins, tetR family JHT21_00915 PF04127 DNA / pantothenate metabolism flavoprotein JHT21_00915 PF02441 Flavoprotein JHT21_00920 PF00672 HAMP domain JHT21_00920 PF17200 Single Cache domain 2 JHT21_00920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT21_00925 PF04002 RadC-like JAB domain JHT21_00930 PF00830 Ribosomal L28 family JHT21_00935 PF00471 Ribosomal protein L33 JHT21_00945 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JHT21_00945 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JHT21_00945 PF06827 Zinc finger found in FPG and IleRS JHT21_00950 PF01467 Cytidylyltransferase-like JHT21_00955 PF05686 Glycosyl transferase family 90 JHT21_00960 PF00535 Glycosyl transferase family 2 JHT21_00965 PF00535 Glycosyl transferase family 2 JHT21_00970 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JHT21_00975 PF01219 Prokaryotic diacylglycerol kinase JHT21_00985 PF16363 GDP-mannose 4,6 dehydratase JHT21_00990 PF00483 Nucleotidyl transferase JHT21_00995 PF05523 WxcM-like, C-terminal JHT21_01000 PF00132 Bacterial transferase hexapeptide (six repeats) JHT21_01005 PF01575 MaoC like domain JHT21_01010 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JHT21_01025 PF00534 Glycosyl transferases group 1 JHT21_01025 PF13439 Glycosyltransferase Family 4 JHT21_01035 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) JHT21_01040 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JHT21_01045 PF03279 Bacterial lipid A biosynthesis acyltransferase JHT21_01050 PF01370 NAD dependent epimerase/dehydratase family JHT21_01055 PF06082 Exopolysaccharide biosynthesis protein YbjH JHT21_01090 PF02719 Polysaccharide biosynthesis protein JHT21_01095 PF02348 Cytidylyltransferase JHT21_01100 PF04321 RmlD substrate binding domain JHT21_01105 PF03102 NeuB family JHT21_01105 PF08666 SAF domain JHT21_01150 PF01050 Mannose-6-phosphate isomerase JHT21_01150 PF00483 Nucleotidyl transferase JHT21_01155 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JHT21_01155 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JHT21_01155 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JHT21_01155 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JHT21_01160 PF01238 Phosphomannose isomerase type I JHT21_01165 PF00535 Glycosyl transferase family 2 JHT21_01170 PF01370 NAD dependent epimerase/dehydratase family JHT21_01175 PF02397 Bacterial sugar transferase JHT21_01180 PF02719 Polysaccharide biosynthesis protein JHT21_01185 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JHT21_01185 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JHT21_01185 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JHT21_01190 PF10996 Beta-Casp domain JHT21_01190 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JHT21_01190 PF00753 Metallo-beta-lactamase superfamily JHT21_01195 PF00121 Triosephosphate isomerase JHT21_01215 PF08220 DeoR-like helix-turn-helix domain JHT21_01215 PF00455 DeoR C terminal sensor domain JHT21_01220 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded JHT21_01225 PF06005 Cell division protein ZapB JHT21_01230 PF03737 Aldolase/RraA JHT21_01235 PF01040 UbiA prenyltransferase family JHT21_01240 PF07724 AAA domain (Cdc48 subfamily) JHT21_01240 PF00004 ATPase family associated with various cellular activities (AAA) JHT21_01245 PF00227 Proteasome subunit JHT21_01255 PF00356 Bacterial regulatory proteins, lacI family JHT21_01260 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JHT21_01260 PF00270 DEAD/DEAH box helicase JHT21_01260 PF00271 Helicase conserved C-terminal domain JHT21_01260 PF17764 3′ DNA-binding domain (3′BD) JHT21_01260 PF18074 Primosomal protein N C-terminal domain JHT21_01265 PF01197 Ribosomal protein L31 JHT21_01270 PF00338 Ribosomal protein S10p/S20e JHT21_01275 PF00297 Ribosomal protein L3 JHT21_01280 PF00573 Ribosomal protein L4/L1 family JHT21_01285 PF00276 Ribosomal protein L23 JHT21_01290 PF00181 Ribosomal Proteins L2, RNA binding domain JHT21_01290 PF03947 Ribosomal Proteins L2, C-terminal domain JHT21_01295 PF00203 Ribosomal protein S19 JHT21_01300 PF00237 Ribosomal protein L22p/L17e JHT21_01305 PF07650 KH domain JHT21_01305 PF00189 Ribosomal protein S3, C-terminal domain JHT21_01310 PF00252 Ribosomal protein L16p/L10e JHT21_01315 PF00831 Ribosomal L29 protein JHT21_01320 PF00366 Ribosomal protein S17 JHT21_01325 PF00238 Ribosomal protein L14p/L23e JHT21_01330 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JHT21_01330 PF00467 KOW motif JHT21_01335 PF00673 ribosomal L5P family C-terminus JHT21_01335 PF00281 Ribosomal protein L5 JHT21_01340 PF00253 Ribosomal protein S14p/S29e JHT21_01345 PF00410 Ribosomal protein S8 JHT21_01350 PF00347 Ribosomal protein L6 JHT21_01355 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JHT21_01360 PF03719 Ribosomal protein S5, C-terminal domain JHT21_01360 PF00333 Ribosomal protein S5, N-terminal domain JHT21_01365 PF00327 Ribosomal protein L30p/L7e JHT21_01370 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JHT21_01375 PF00344 SecY translocase JHT21_01380 PF00444 Ribosomal protein L36 JHT21_01385 PF00416 Ribosomal protein S13/S18 JHT21_01390 PF00411 Ribosomal protein S11 JHT21_01395 PF01479 S4 domain JHT21_01395 PF00163 Ribosomal protein S4/S9 N-terminal domain JHT21_01400 PF01000 RNA polymerase Rpb3/RpoA insert domain JHT21_01400 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JHT21_01400 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JHT21_01405 PF01196 Ribosomal protein L17 JHT21_01415 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JHT21_01415 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JHT21_01425 PF13673 Acetyltransferase (GNAT) domain JHT21_01430 PF03880 DbpA RNA binding domain JHT21_01430 PF00270 DEAD/DEAH box helicase JHT21_01430 PF00271 Helicase conserved C-terminal domain JHT21_01440 PF02872 5'-nucleotidase, C-terminal domain JHT21_01440 PF00149 Calcineurin-like phosphoesterase JHT21_01445 PF10414 Sirohaem synthase dimerisation region JHT21_01445 PF14824 Sirohaem biosynthesis protein central JHT21_01445 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JHT21_01450 PF01507 Phosphoadenosine phosphosulfate reductase family JHT21_01455 PF00009 Elongation factor Tu GTP binding domain JHT21_01460 PF03600 Citrate transporter JHT21_01460 PF02080 TrkA-C domain JHT21_01485 PF00005 ABC transporter JHT21_01495 PF10795 Protein of unknown function (DUF2607) JHT21_01500 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) JHT21_01505 PF06526 Protein of unknown function (DUF1107) JHT21_01510 PF01625 Peptide methionine sulfoxide reductase JHT21_01515 PF01103 Surface antigen JHT21_01515 PF17243 POTRA domain TamA domain 1 JHT21_01520 PF04357 TamB, inner membrane protein subunit of TAM complex JHT21_01525 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like JHT21_01535 PF00719 Inorganic pyrophosphatase JHT21_01540 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain JHT21_01545 PF01225 Mur ligase family, catalytic domain JHT21_01545 PF02875 Mur ligase family, glutamate ligase domain JHT21_01545 PF08245 Mur ligase middle domain JHT21_01550 PF02441 Flavoprotein JHT21_01560 PF00528 Binding-protein-dependent transport system inner membrane component JHT21_01565 PF00005 ABC transporter JHT21_01580 PF16868 NMT1-like family JHT21_01585 PF02863 Arginine repressor, C-terminal domain JHT21_01585 PF01316 Arginine repressor, DNA binding domain JHT21_01590 PF00056 lactate/malate dehydrogenase, NAD binding domain JHT21_01590 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JHT21_01600 PF00348 Polyprenyl synthetase JHT21_01605 PF00829 Ribosomal prokaryotic L21 protein JHT21_01610 PF01016 Ribosomal L27 protein JHT21_01615 PF01018 GTP1/OBG JHT21_01615 PF01926 50S ribosome-binding GTPase JHT21_01620 PF06738 Putative threonine/serine exporter JHT21_01625 PF12821 Threonine/Serine exporter, ThrE JHT21_01630 PF00186 Dihydrofolate reductase JHT21_01635 PF00149 Calcineurin-like phosphoesterase JHT21_01640 PF04379 ApaG domain JHT21_01645 PF00398 Ribosomal RNA adenine dimethylase JHT21_01650 PF04166 Pyridoxal phosphate biosynthetic protein PdxA JHT21_01655 PF09312 SurA N-terminal domain JHT21_01660 PF04453 LPS transport system D JHT21_01660 PF03968 OstA-like protein JHT21_01665 PF00226 DnaJ domain JHT21_01665 PF05099 Tellurite resistance protein TerB JHT21_01675 PF00694 Aconitase C-terminal domain JHT21_01680 PF00330 Aconitase family (aconitate hydratase) JHT21_01685 PF00180 Isocitrate/isopropylmalate dehydrogenase JHT21_01690 PF00682 HMGL-like JHT21_01690 PF08502 LeuA allosteric (dimerisation) domain JHT21_01700 PF01569 PAP2 superfamily JHT21_01710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_01710 PF03466 LysR substrate binding domain JHT21_01715 PF00501 AMP-binding enzyme JHT21_01720 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JHT21_01720 PF00205 Thiamine pyrophosphate enzyme, central domain JHT21_01720 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JHT21_01725 PF10369 Small subunit of acetolactate synthase JHT21_01730 PF00990 Diguanylate cyclase, GGDEF domain JHT21_01740 PF00224 Pyruvate kinase, barrel domain JHT21_01740 PF02887 Pyruvate kinase, alpha/beta domain JHT21_01745 PF00455 DeoR C terminal sensor domain JHT21_01745 PF08220 DeoR-like helix-turn-helix domain JHT21_01750 PF01380 SIS domain JHT21_01760 PF00072 Response regulator receiver domain JHT21_01760 PF00486 Transcriptional regulatory protein, C terminal JHT21_01765 PF00672 HAMP domain JHT21_01765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_01765 PF00512 His Kinase A (phospho-acceptor) domain JHT21_01770 PF13419 Haloacid dehalogenase-like hydrolase JHT21_01775 PF05068 Mannitol repressor JHT21_01780 PF01232 Mannitol dehydrogenase Rossmann domain JHT21_01780 PF08125 Mannitol dehydrogenase C-terminal domain JHT21_01785 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JHT21_01785 PF02378 Phosphotransferase system, EIIC JHT21_01785 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JHT21_01815 PF03180 NLPA lipoprotein JHT21_01825 PF04546 Sigma-70, non-essential region JHT21_01825 PF03979 Sigma-70 factor, region 1.1 JHT21_01825 PF00140 Sigma-70 factor, region 1.2 JHT21_01825 PF04542 Sigma-70 region 2 JHT21_01825 PF04539 Sigma-70 region 3 JHT21_01825 PF04545 Sigma-70, region 4 JHT21_01830 PF10410 DnaB-helicase binding domain of primase JHT21_01830 PF08278 DNA primase DnaG DnaB-binding JHT21_01830 PF08275 DNA primase catalytic core, N-terminal domain JHT21_01830 PF01807 CHC2 zinc finger JHT21_01835 PF09424 Yqey-like protein JHT21_01840 PF01165 Ribosomal protein S21 JHT21_01845 PF00814 Glycoprotease family JHT21_01850 PF12697 Alpha/beta hydrolase family JHT21_01855 PF02660 Glycerol-3-phosphate acyltransferase JHT21_01860 PF02152 Dihydroneopterin aldolase JHT21_01865 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JHT21_01870 PF02673 Bacitracin resistance protein BacA JHT21_01875 PF12627 Probable RNA and SrmB- binding site of polymerase A JHT21_01875 PF01966 HD domain JHT21_01875 PF01743 Poly A polymerase head domain JHT21_01880 PF01471 Putative peptidoglycan binding domain JHT21_01880 PF13401 AAA domain JHT21_01890 PF08239 Bacterial SH3 domain JHT21_01895 PF01384 Phosphate transporter family JHT21_01900 PF01865 Protein of unknown function DUF47 JHT21_01905 PF01928 CYTH domain JHT21_01915 PF00672 HAMP domain JHT21_01915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT21_01920 PF08335 GlnD PII-uridylyltransferase JHT21_01920 PF03710 Glutamate-ammonia ligase adenylyltransferase JHT21_01925 PF00294 pfkB family carbohydrate kinase JHT21_01925 PF01467 Cytidylyltransferase-like JHT21_01930 PF02321 Outer membrane efflux protein JHT21_01935 PF00293 NUDIX domain JHT21_01940 PF06853 Protein of unknown function (DUF1249) JHT21_01945 PF00149 Calcineurin-like phosphoesterase JHT21_01950 PF05728 Uncharacterised protein family (UPF0227) JHT21_01955 PF00986 DNA gyrase B subunit, carboxyl terminus JHT21_01955 PF00204 DNA gyrase B JHT21_01955 PF01751 Toprim domain JHT21_01955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_01960 PF03989 DNA gyrase C-terminal domain, beta-propeller JHT21_01960 PF00521 DNA gyrase/topoisomerase IV, subunit A JHT21_01965 PF13180 PDZ domain JHT21_01970 PF00595 PDZ domain JHT21_01975 PF06295 Protein of unknown function (DUF1043) JHT21_01980 PF03969 AFG1-like ATPase JHT21_01985 PF00572 Ribosomal protein L13 JHT21_01990 PF00380 Ribosomal protein S9/S16 JHT21_01995 PF00355 Rieske [2Fe-2S] domain JHT21_01995 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal JHT21_02000 PF00032 Cytochrome b(C-terminal)/b6/petD JHT21_02000 PF00033 Cytochrome b/b6/petB JHT21_02005 PF02167 Cytochrome C1 family JHT21_02010 PF00043 Glutathione S-transferase, C-terminal domain JHT21_02010 PF02798 Glutathione S-transferase, N-terminal domain JHT21_02015 PF04386 Stringent starvation protein B JHT21_02020 PF04972 BON domain JHT21_02025 PF13580 SIS domain JHT21_02030 PF02021 Uncharacterised protein family UPF0102 JHT21_02035 PF04348 LppC putative lipoprotein JHT21_02040 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JHT21_02050 PF01795 MraW methylase family JHT21_02055 PF04999 Cell division protein FtsL JHT21_02060 PF03717 Penicillin-binding Protein dimerisation domain JHT21_02060 PF00905 Penicillin binding protein transpeptidase domain JHT21_02065 PF01225 Mur ligase family, catalytic domain JHT21_02065 PF08245 Mur ligase middle domain JHT21_02065 PF02875 Mur ligase family, glutamate ligase domain JHT21_02070 PF02875 Mur ligase family, glutamate ligase domain JHT21_02070 PF01225 Mur ligase family, catalytic domain JHT21_02070 PF08245 Mur ligase middle domain JHT21_02075 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 JHT21_02075 PF00953 Glycosyl transferase family 4 JHT21_02080 PF08245 Mur ligase middle domain JHT21_02080 PF02875 Mur ligase family, glutamate ligase domain JHT21_02085 PF01098 Cell cycle protein JHT21_02090 PF03033 Glycosyltransferase family 28 N-terminal domain JHT21_02090 PF04101 Glycosyltransferase family 28 C-terminal domain JHT21_02095 PF08245 Mur ligase middle domain JHT21_02095 PF02875 Mur ligase family, glutamate ligase domain JHT21_02095 PF01225 Mur ligase family, catalytic domain JHT21_02100 PF08478 POTRA domain, FtsQ-type JHT21_02100 PF03799 Cell division protein FtsQ JHT21_02105 PF02491 SHS2 domain inserted in FTSA JHT21_02110 PF00091 Tubulin/FtsZ family, GTPase domain JHT21_02110 PF12327 FtsZ family, C-terminal domain JHT21_02115 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase JHT21_02125 PF07516 SecA Wing and Scaffold domain JHT21_02125 PF01043 SecA preprotein cross-linking domain JHT21_02125 PF07517 SecA DEAD-like domain JHT21_02125 PF02810 SEC-C motif JHT21_02130 PF00293 NUDIX domain JHT21_02135 PF05173 Dihydrodipicolinate reductase, C-terminus JHT21_02135 PF01113 Dihydrodipicolinate reductase, N-terminus JHT21_02140 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JHT21_02140 PF00117 Glutamine amidotransferase class-I JHT21_02145 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JHT21_02145 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JHT21_02145 PF02142 MGS-like domain JHT21_02155 PF01925 Sulfite exporter TauE/SafE JHT21_02160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_02160 PF03466 LysR substrate binding domain JHT21_02165 PF03458 UPF0126 domain JHT21_02170 PF01497 Periplasmic binding protein JHT21_02175 PF17113 Regulatory signalling modulator protein AmpE JHT21_02175 PF03186 CobD/Cbib protein JHT21_02180 PF01048 Phosphorylase superfamily JHT21_02190 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHT21_02190 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JHT21_02195 PF01645 Conserved region in glutamate synthase JHT21_02195 PF01493 GXGXG motif JHT21_02195 PF04898 Glutamate synthase central domain JHT21_02195 PF00310 Glutamine amidotransferases class-II JHT21_02200 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JHT21_02200 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHT21_02205 PF00310 Glutamine amidotransferases class-II JHT21_02205 PF04898 Glutamate synthase central domain JHT21_02205 PF01645 Conserved region in glutamate synthase JHT21_02205 PF01493 GXGXG motif JHT21_02210 PF16199 Radical_SAM C-terminal domain JHT21_02210 PF04055 Radical SAM superfamily JHT21_02215 PF01590 GAF domain JHT21_02215 PF00990 Diguanylate cyclase, GGDEF domain JHT21_02215 PF00360 Phytochrome region JHT21_02215 PF00563 EAL domain JHT21_02220 PF00989 PAS fold JHT21_02220 PF00072 Response regulator receiver domain JHT21_02220 PF18415 Histidine kinase receptor ArcB trans-membrane domain JHT21_02220 PF00512 His Kinase A (phospho-acceptor) domain JHT21_02220 PF01627 Hpt domain JHT21_02220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_02230 PF00072 Response regulator receiver domain JHT21_02230 PF00486 Transcriptional regulatory protein, C terminal JHT21_02240 PF03737 Aldolase/RraA JHT21_02250 PF03447 Homoserine dehydrogenase, NAD binding domain JHT21_02250 PF13840 ACT domain JHT21_02250 PF01842 ACT domain JHT21_02250 PF00696 Amino acid kinase family JHT21_02250 PF00742 Homoserine dehydrogenase JHT21_02255 PF00288 GHMP kinases N terminal domain JHT21_02255 PF08544 GHMP kinases C terminal JHT21_02260 PF00291 Pyridoxal-phosphate dependent enzyme JHT21_02260 PF14821 Threonine synthase N terminus JHT21_02265 PF01228 Glycine radical JHT21_02270 PF01261 Xylose isomerase-like TIM barrel JHT21_02275 PF03167 Uracil DNA glycosylase superfamily JHT21_02290 PF01235 Sodium:alanine symporter family JHT21_02295 PF03883 Peroxide stress protein YaaA JHT21_02300 PF00271 Helicase conserved C-terminal domain JHT21_02300 PF00270 DEAD/DEAH box helicase JHT21_02305 PF05175 Methyltransferase small domain JHT21_02310 PF05525 Branched-chain amino acid transport protein JHT21_02315 PF00258 Flavodoxin JHT21_02320 PF02899 Phage integrase, N-terminal SAM-like domain JHT21_02320 PF00589 Phage integrase family JHT21_02325 PF10411 Disulfide bond isomerase protein N-terminus JHT21_02325 PF13098 Thioredoxin-like domain JHT21_02330 PF01368 DHH family JHT21_02330 PF02272 DHHA1 domain JHT21_02330 PF17768 RecJ OB domain JHT21_02340 PF00152 tRNA synthetases class II (D, K and N) JHT21_02340 PF01336 OB-fold nucleic acid binding domain JHT21_02345 PF00072 Response regulator receiver domain JHT21_02345 PF02954 Bacterial regulatory protein, Fis family JHT21_02345 PF00158 Sigma-54 interaction domain JHT21_02355 PF00248 Aldo/keto reductase family JHT21_02365 PF02976 DNA mismatch repair enzyme MutH JHT21_02370 PF00293 NUDIX domain JHT21_02375 PF00391 PEP-utilising enzyme, mobile domain JHT21_02375 PF05524 PEP-utilising enzyme, N-terminal JHT21_02375 PF01590 GAF domain JHT21_02375 PF02896 PEP-utilising enzyme, TIM barrel domain JHT21_02380 PF01925 Sulfite exporter TauE/SafE JHT21_02385 PF01790 Prolipoprotein diacylglyceryl transferase JHT21_02390 PF00303 Thymidylate synthase JHT21_02400 PF02690 Na+/Pi-cotransporter JHT21_02405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_02405 PF03466 LysR substrate binding domain JHT21_02410 PF01022 Bacterial regulatory protein, arsR family JHT21_02415 PF01649 Ribosomal protein S20 JHT21_02420 PF03023 Lipid II flippase MurJ JHT21_02425 PF06574 FAD synthetase JHT21_02425 PF01687 Riboflavin kinase JHT21_02430 PF08264 Anticodon-binding domain of tRNA JHT21_02430 PF00133 tRNA synthetases class I (I, L, M and V) JHT21_02430 PF06827 Zinc finger found in FPG and IleRS JHT21_02435 PF01252 Signal peptidase (SPase) II JHT21_02440 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JHT21_02445 PF02401 LytB protein JHT21_02450 PF04397 LytTr DNA-binding domain JHT21_02450 PF00072 Response regulator receiver domain JHT21_02455 PF07694 5TMR of 5TMR-LYT JHT21_02455 PF06580 Histidine kinase JHT21_02460 PF02554 Carbon starvation protein CstA JHT21_02475 PF13580 SIS domain JHT21_02480 PF03702 Anhydro-N-acetylmuramic acid kinase JHT21_02485 PF00933 Glycosyl hydrolase family 3 N terminal domain JHT21_02490 PF00793 DAHP synthetase I family JHT21_02495 PF01817 Chorismate mutase type II JHT21_02495 PF02153 Prephenate dehydrogenase JHT21_02500 PF04225 Opacity-associated protein A LysM-like domain JHT21_02500 PF01551 Peptidase family M23 JHT21_02505 PF07238 PilZ domain JHT21_02510 PF00005 ABC transporter JHT21_02510 PF12848 ABC transporter JHT21_02515 PF01464 Transglycosylase SLT domain JHT21_02515 PF14718 Soluble lytic murein transglycosylase L domain JHT21_02520 PF01371 Trp repressor protein JHT21_02525 PF01931 Protein of unknown function DUF84 JHT21_02530 PF01817 Chorismate mutase type II JHT21_02530 PF00800 Prephenate dehydratase JHT21_02535 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JHT21_02540 PF01464 Transglycosylase SLT domain JHT21_02545 PF13525 Outer membrane lipoprotein JHT21_02550 PF00849 RNA pseudouridylate synthase JHT21_02550 PF01479 S4 domain JHT21_02555 PF02578 Multi-copper polyphenol oxidoreductase laccase JHT21_02560 PF00004 ATPase family associated with various cellular activities (AAA) JHT21_02560 PF07724 AAA domain (Cdc48 subfamily) JHT21_02560 PF17871 AAA lid domain JHT21_02560 PF02861 Clp amino terminal domain, pathogenicity island component JHT21_02560 PF10431 C-terminal, D2-small domain, of ClpB protein JHT21_02605 PF03411 Penicillin-insensitive murein endopeptidase JHT21_02615 PF00037 4Fe-4S binding domain JHT21_02620 PF16325 Peptidase family U32 C-terminal domain JHT21_02620 PF01136 Peptidase family U32 JHT21_02625 PF04381 Putative exonuclease, RdgC JHT21_02630 PF00486 Transcriptional regulatory protein, C terminal JHT21_02630 PF00072 Response regulator receiver domain JHT21_02635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_02635 PF00512 His Kinase A (phospho-acceptor) domain JHT21_02635 PF00989 PAS fold JHT21_02635 PF11808 Phosphate regulon sensor protein PhoR JHT21_02640 PF12849 PBP superfamily domain JHT21_02645 PF02541 Ppx/GppA phosphatase family JHT21_02650 PF13090 Polyphosphate kinase C-terminal domain 2 JHT21_02650 PF02503 Polyphosphate kinase middle domain JHT21_02650 PF13089 Polyphosphate kinase N-terminal domain JHT21_02650 PF17941 Polyphosphate kinase C-terminal domain 1 JHT21_02655 PF00528 Binding-protein-dependent transport system inner membrane component JHT21_02660 PF00528 Binding-protein-dependent transport system inner membrane component JHT21_02665 PF00005 ABC transporter JHT21_02670 PF01895 PhoU domain JHT21_02675 PF03976 Polyphosphate kinase 2 (PPK2) JHT21_02680 PF03932 CutC family JHT21_02685 PF10417 C-terminal domain of 1-Cys peroxiredoxin JHT21_02685 PF00578 AhpC/TSA family JHT21_02690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_02690 PF03466 LysR substrate binding domain JHT21_02695 PF01274 Malate synthase JHT21_02700 PF00463 Isocitrate lyase family JHT21_02705 PF00571 CBS domain JHT21_02715 PF02547 Queuosine biosynthesis protein JHT21_02720 PF01702 Queuine tRNA-ribosyltransferase JHT21_02725 PF02699 Preprotein translocase subunit JHT21_02730 PF02355 Protein export membrane protein JHT21_02730 PF07549 SecD/SecF GG Motif JHT21_02730 PF13721 SecD export protein N-terminal TM region JHT21_02735 PF07549 SecD/SecF GG Motif JHT21_02735 PF02355 Protein export membrane protein JHT21_02740 PF00459 Inositol monophosphatase family JHT21_02745 PF00588 SpoU rRNA Methylase family JHT21_02750 PF02082 Transcriptional regulator JHT21_02755 PF00266 Aminotransferase class-V JHT21_02760 PF01592 NifU-like N terminal domain JHT21_02765 PF01521 Iron-sulphur cluster biosynthesis JHT21_02770 PF00226 DnaJ domain JHT21_02770 PF07743 HSCB C-terminal oligomerisation domain JHT21_02775 PF00012 Hsp70 protein JHT21_02780 PF00111 2Fe-2S iron-sulfur cluster binding domain JHT21_02785 PF04384 Iron-sulphur cluster assembly JHT21_02790 PF00883 Cytosol aminopeptidase family, catalytic domain JHT21_02790 PF12404 Peptidase JHT21_02795 PF00334 Nucleoside diphosphate kinase JHT21_02800 PF04055 Radical SAM superfamily JHT21_02805 PF13464 Domain of unknown function (DUF4115) JHT21_02810 PF04551 GcpE protein JHT21_02815 PF13393 Histidyl-tRNA synthetase JHT21_02815 PF03129 Anticodon binding domain JHT21_02820 PF09976 Tetratricopeptide repeat-like domain JHT21_02825 PF13360 PQQ-like domain JHT21_02830 PF01926 50S ribosome-binding GTPase JHT21_02830 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JHT21_02845 PF02601 Exonuclease VII, large subunit JHT21_02845 PF13742 OB-fold nucleic acid binding domain JHT21_02850 PF00571 CBS domain JHT21_02850 PF00478 IMP dehydrogenase / GMP reductase domain JHT21_02855 PF02540 NAD synthase JHT21_02855 PF00958 GMP synthase C terminal domain JHT21_02855 PF00117 Glutamine amidotransferase class-I JHT21_02860 PF03553 Na+/H+ antiporter family JHT21_02865 PF00704 Glycosyl hydrolases family 18 JHT21_02865 PF06483 Chitinase C JHT21_02870 PF01184 GPR1/FUN34/yaaH family JHT21_02885 PF01266 FAD dependent oxidoreductase JHT21_02890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_02890 PF03466 LysR substrate binding domain JHT21_02905 PF07969 Amidohydrolase family JHT21_02910 PF01053 Cys/Met metabolism PLP-dependent enzyme JHT21_02915 PF00202 Aminotransferase class-III JHT21_02935 PF00583 Acetyltransferase (GNAT) family JHT21_02935 PF00795 Carbon-nitrogen hydrolase JHT21_02940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_02940 PF03466 LysR substrate binding domain JHT21_03000 PF01668 SmpB protein JHT21_03005 PF03364 Polyketide cyclase / dehydrase and lipid transport JHT21_03010 PF03658 RnfH family Ubiquitin JHT21_03015 PF04355 SmpA / OmlA family JHT21_03020 PF02463 RecF/RecN/SMC N terminal domain JHT21_03030 PF01513 ATP-NAD kinase JHT21_03035 PF01025 GrpE JHT21_03040 PF00375 Sodium:dicarboxylate symporter family JHT21_03045 PF00012 Hsp70 protein JHT21_03050 PF01556 DnaJ C terminal domain JHT21_03050 PF00226 DnaJ domain JHT21_03050 PF00684 DnaJ central domain JHT21_03055 PF00114 Pilin (bacterial filament) JHT21_03055 PF07963 Prokaryotic N-terminal methylation motif JHT21_03060 PF07963 Prokaryotic N-terminal methylation motif JHT21_03060 PF00114 Pilin (bacterial filament) JHT21_03080 PF03806 AbgT putative transporter family JHT21_03085 PF14437 MafB19-like deaminase JHT21_03090 PF01464 Transglycosylase SLT domain JHT21_03090 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHT21_03095 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal JHT21_03095 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JHT21_03095 PF02769 AIR synthase related protein, C-terminal domain JHT21_03120 PF07687 Peptidase dimerisation domain JHT21_03120 PF01546 Peptidase family M20/M25/M40 JHT21_03125 PF00860 Permease family JHT21_03130 PF00156 Phosphoribosyl transferase domain JHT21_03135 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) JHT21_03140 PF07417 Sigma factor-binding transcriptional regulator Crl JHT21_03145 PF00696 Amino acid kinase family JHT21_03145 PF01472 PUA domain JHT21_03150 PF00171 Aldehyde dehydrogenase family JHT21_03155 PF03477 ATP cone domain JHT21_03160 PF01872 RibD C-terminal domain JHT21_03160 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JHT21_03165 PF00677 Lumazine binding domain JHT21_03170 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JHT21_03170 PF00925 GTP cyclohydrolase II JHT21_03175 PF00885 6,7-dimethyl-8-ribityllumazine synthase JHT21_03180 PF01029 NusB family JHT21_03185 PF00586 AIR synthase related protein, N-terminal domain JHT21_03185 PF02769 AIR synthase related protein, C-terminal domain JHT21_03190 PF04608 Phosphatidylglycerophosphatase A JHT21_03195 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JHT21_03195 PF02780 Transketolase, C-terminal domain JHT21_03195 PF02779 Transketolase, pyrimidine binding domain JHT21_03200 PF00348 Polyprenyl synthetase JHT21_03205 PF02609 Exonuclease VII small subunit JHT21_03210 PF01618 MotA/TolQ/ExbB proton channel family JHT21_03215 PF00691 OmpA family JHT21_03220 PF02926 THUMP domain JHT21_03220 PF02568 Thiamine biosynthesis protein (ThiI) JHT21_03225 PF03466 LysR substrate binding domain JHT21_03225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_03235 PF04241 Protein of unknown function (DUF423) JHT21_03240 PF01728 FtsJ-like methyltransferase JHT21_03240 PF18125 RlmM ferredoxin-like domain JHT21_03245 PF01223 DNA/RNA non-specific endonuclease JHT21_03250 PF01367 5'-3' exonuclease, C-terminal SAM fold JHT21_03250 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JHT21_03255 PF11892 Domain of unknown function (DUF3412) JHT21_03255 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases JHT21_03255 PF03641 Possible lysine decarboxylase JHT21_03260 PF00990 Diguanylate cyclase, GGDEF domain JHT21_03270 PF14489 QueF-like protein JHT21_03270 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term JHT21_03275 PF07348 Syd protein (SUKH-2) JHT21_03280 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) JHT21_03285 PF03180 NLPA lipoprotein JHT21_03290 PF00528 Binding-protein-dependent transport system inner membrane component JHT21_03295 PF09383 NIL domain JHT21_03295 PF00005 ABC transporter JHT21_03305 PF00356 Bacterial regulatory proteins, lacI family JHT21_03310 PF00367 phosphotransferase system, EIIB JHT21_03310 PF02378 Phosphotransferase system, EIIC JHT21_03315 PF16657 Maltogenic Amylase, C-terminal domain JHT21_03315 PF00128 Alpha amylase, catalytic domain JHT21_03330 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JHT21_03330 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JHT21_03335 PF00464 Serine hydroxymethyltransferase JHT21_03340 PF04055 Radical SAM superfamily JHT21_03340 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family JHT21_03345 PF03099 Biotin/lipoate A/B protein ligase family JHT21_03350 PF04359 Protein of unknown function (DUF493) JHT21_03355 PF07943 Penicillin-binding protein 5, C-terminal domain JHT21_03355 PF00768 D-alanyl-D-alanine carboxypeptidase JHT21_03360 PF05036 Sporulation related domain JHT21_03360 PF03330 Lytic transglycolase JHT21_03365 PF01098 Cell cycle protein JHT21_03370 PF00905 Penicillin binding protein transpeptidase domain JHT21_03370 PF03717 Penicillin-binding Protein dimerisation domain JHT21_03375 PF02590 Predicted SPOUT methyltransferase JHT21_03385 PF06144 DNA polymerase III, delta subunit JHT21_03385 PF14840 Processivity clamp loader gamma complex DNA pol III C-term JHT21_03390 PF04390 Lipopolysaccharide-assembly JHT21_03395 PF00133 tRNA synthetases class I (I, L, M and V) JHT21_03395 PF08264 Anticodon-binding domain of tRNA JHT21_03395 PF13603 Leucyl-tRNA synthetase, Domain 2 JHT21_03400 PF07295 Zinc-ribbon containing domain JHT21_03405 PF00795 Carbon-nitrogen hydrolase JHT21_03410 PF00571 CBS domain JHT21_03410 PF03471 Transporter associated domain JHT21_03415 PF02130 Uncharacterized protein family UPF0054 JHT21_03420 PF02562 PhoH-like protein JHT21_03425 PF00919 Uncharacterized protein family UPF0004 JHT21_03425 PF01938 TRAM domain JHT21_03425 PF04055 Radical SAM superfamily JHT21_03430 PF01494 FAD binding domain JHT21_03545 PF06071 Protein of unknown function (DUF933) JHT21_03545 PF01926 50S ribosome-binding GTPase JHT21_03550 PF01195 Peptidyl-tRNA hydrolase JHT21_03555 PF14572 Phosphoribosyl synthetase-associated domain JHT21_03555 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JHT21_03560 PF08544 GHMP kinases C terminal JHT21_03560 PF00288 GHMP kinases N terminal domain JHT21_03565 PF03550 Outer membrane lipoprotein LolB JHT21_03570 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JHT21_03570 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JHT21_03570 PF01488 Shikimate / quinate 5-dehydrogenase JHT21_03575 PF03462 PCRF domain JHT21_03575 PF00472 RF-1 domain JHT21_03580 PF13847 Methyltransferase domain JHT21_03580 PF17827 PrmC N-terminal domain JHT21_03585 PF04247 Invasion gene expression up-regulator, SirB JHT21_03590 PF13369 Transglutaminase-like superfamily JHT21_03595 PF00793 DAHP synthetase I family JHT21_03600 PF02872 5'-nucleotidase, C-terminal domain JHT21_03600 PF00149 Calcineurin-like phosphoesterase JHT21_03605 PF04073 Aminoacyl-tRNA editing domain JHT21_03610 PF01479 S4 domain JHT21_03610 PF00849 RNA pseudouridylate synthase JHT21_03615 PF01713 Smr domain JHT21_03635 PF03173 Putative carbohydrate binding domain JHT21_03635 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain JHT21_03635 PF00728 Glycosyl hydrolase family 20, catalytic domain JHT21_03635 PF02838 Glycosyl hydrolase family 20, domain 2 JHT21_03650 PF00403 Heavy-metal-associated domain JHT21_03655 PF13609 Gram-negative porin JHT21_03660 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) JHT21_03665 PF00749 tRNA synthetases class I (E and Q), catalytic domain JHT21_03670 PF00691 OmpA family JHT21_03670 PF01389 OmpA-like transmembrane domain JHT21_03715 PF00072 Response regulator receiver domain JHT21_03715 PF01584 CheW-like domain JHT21_03720 PF01739 CheR methyltransferase, SAM binding domain JHT21_03720 PF03705 CheR methyltransferase, all-alpha domain JHT21_03725 PF00460 Flagella basal body rod protein JHT21_03730 PF00460 Flagella basal body rod protein JHT21_03730 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JHT21_03735 PF13861 FlgD Tudor-like domain JHT21_03735 PF03963 Flagellar hook capping protein - N-terminal region JHT21_03735 PF13860 FlgD Ig-like domain JHT21_03740 PF00460 Flagella basal body rod protein JHT21_03740 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JHT21_03740 PF07559 Flagellar basal body protein FlaE JHT21_03745 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JHT21_03745 PF00460 Flagella basal body rod protein JHT21_03750 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JHT21_03750 PF00460 Flagella basal body rod protein JHT21_03755 PF02107 Flagellar L-ring protein JHT21_03760 PF02119 Flagellar P-ring protein JHT21_03765 PF10135 Rod binding protein JHT21_03765 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JHT21_03770 PF07196 Flagellin hook IN motif JHT21_03770 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JHT21_03775 PF00669 Bacterial flagellin N-terminal helical region JHT21_03780 PF00700 Bacterial flagellin C-terminal helical region JHT21_03780 PF00669 Bacterial flagellin N-terminal helical region JHT21_03780 PF07196 Flagellin hook IN motif JHT21_03785 PF00669 Bacterial flagellin N-terminal helical region JHT21_03785 PF07196 Flagellin hook IN motif JHT21_03785 PF00700 Bacterial flagellin C-terminal helical region JHT21_03790 PF07196 Flagellin hook IN motif JHT21_03790 PF00669 Bacterial flagellin N-terminal helical region JHT21_03790 PF00700 Bacterial flagellin C-terminal helical region JHT21_03795 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JHT21_03800 PF05524 PEP-utilising enzyme, N-terminal JHT21_03800 PF00391 PEP-utilising enzyme, mobile domain JHT21_03800 PF02896 PEP-utilising enzyme, TIM barrel domain JHT21_03805 PF00381 PTS HPr component phosphorylation site JHT21_03810 PF00291 Pyridoxal-phosphate dependent enzyme JHT21_03820 PF04354 ZipA, C-terminal FtsZ-binding domain JHT21_03825 PF00533 BRCA1 C Terminus (BRCT) domain JHT21_03825 PF12826 Helix-hairpin-helix motif JHT21_03825 PF01653 NAD-dependent DNA ligase adenylation domain JHT21_03825 PF03120 NAD-dependent DNA ligase OB-fold domain JHT21_03825 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JHT21_03830 PF03573 outer membrane porin, OprD family JHT21_03845 PF16200 C-terminal region of band_7 JHT21_03845 PF01145 SPFH domain / Band 7 family JHT21_03850 PF00085 Thioredoxin JHT21_03855 PF00106 short chain dehydrogenase JHT21_03860 PF08338 Domain of unknown function (DUF1731) JHT21_03860 PF01370 NAD dependent epimerase/dehydratase family JHT21_03865 PF07556 Protein of unknown function (DUF1538) JHT21_03870 PF07556 Protein of unknown function (DUF1538) JHT21_03885 PF12850 Calcineurin-like phosphoesterase superfamily domain JHT21_03900 PF17323 Trans-membrane regulatory protein ToxS JHT21_03905 PF00486 Transcriptional regulatory protein, C terminal JHT21_03910 PF00183 Hsp90 protein JHT21_03910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_03915 PF05191 Adenylate kinase, active site lid JHT21_03920 PF00762 Ferrochelatase JHT21_03925 PF00854 POT family JHT21_03930 PF02357 Transcription termination factor nusG JHT21_03935 PF00733 Asparagine synthase JHT21_03935 PF13537 Glutamine amidotransferase domain JHT21_03940 PF02254 TrkA-N domain JHT21_03940 PF00999 Sodium/hydrogen exchanger family JHT21_03945 PF01047 MarR family JHT21_03945 PF00480 ROK family JHT21_03950 PF01979 Amidohydrolase family JHT21_03955 PF02378 Phosphotransferase system, EIIC JHT21_03955 PF00367 phosphotransferase system, EIIB JHT21_03960 PF00749 tRNA synthetases class I (E and Q), catalytic domain JHT21_03960 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain JHT21_03965 PF01475 Ferric uptake regulator family JHT21_03970 PF01118 Semialdehyde dehydrogenase, NAD binding domain JHT21_03970 PF02774 Semialdehyde dehydrogenase, dimerisation domain JHT21_03975 PF00258 Flavodoxin JHT21_03985 PF12697 Alpha/beta hydrolase family JHT21_03990 PF03925 SeqA protein C-terminal domain JHT21_03990 PF17206 SeqA protein N-terminal domain JHT21_03995 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JHT21_03995 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JHT21_03995 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JHT21_03995 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JHT21_04005 PF01784 NIF3 (NGG1p interacting factor 3) JHT21_04010 PF00285 Citrate synthase, C-terminal domain JHT21_04015 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JHT21_04020 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JHT21_04025 PF02910 Fumarate reductase flavoprotein C-term JHT21_04025 PF00890 FAD binding domain JHT21_04030 PF13085 2Fe-2S iron-sulfur cluster binding domain JHT21_04035 PF02779 Transketolase, pyrimidine binding domain JHT21_04035 PF16078 2-oxoglutarate dehydrogenase N-terminus JHT21_04035 PF00676 Dehydrogenase E1 component JHT21_04035 PF16870 2-oxoglutarate dehydrogenase C-terminal JHT21_04040 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JHT21_04040 PF00364 Biotin-requiring enzyme JHT21_04040 PF02817 e3 binding domain JHT21_04045 PF08442 ATP-grasp domain JHT21_04045 PF00549 CoA-ligase JHT21_04050 PF00549 CoA-ligase JHT21_04050 PF02629 CoA binding domain JHT21_04055 PF00950 ABC 3 transport family JHT21_04060 PF00005 ABC transporter JHT21_04065 PF01297 Zinc-uptake complex component A periplasmic JHT21_04070 PF02311 AraC-like ligand binding domain JHT21_04070 PF12833 Helix-turn-helix domain JHT21_04075 PF04023 FeoA domain JHT21_04080 PF17910 FeoB cytosolic helical domain JHT21_04080 PF02421 Ferrous iron transport protein B JHT21_04080 PF07670 Nucleoside recognition JHT21_04080 PF07664 Ferrous iron transport protein B C terminus JHT21_04095 PF00750 tRNA synthetases class I (R) JHT21_04095 PF05746 DALR anticodon binding domain JHT21_04095 PF03485 Arginyl tRNA synthetase N terminal domain JHT21_04100 PF06185 YecM protein JHT21_04105 PF01842 ACT domain JHT21_04105 PF00551 Formyl transferase JHT21_04110 PF04851 Type III restriction enzyme, res subunit JHT21_04110 PF13307 Helicase C-terminal domain JHT21_04115 PF00814 Glycoprotease family JHT21_04130 PF00561 alpha/beta hydrolase fold JHT21_04135 PF13193 AMP-binding enzyme C-terminal domain JHT21_04135 PF00501 AMP-binding enzyme JHT21_04140 PF01612 3'-5' exonuclease JHT21_04140 PF00570 HRDC domain JHT21_04145 PF03776 Septum formation topological specificity factor MinE JHT21_04150 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JHT21_04155 PF03775 Septum formation inhibitor MinC, C-terminal domain JHT21_04155 PF05209 Septum formation inhibitor MinC, N-terminal domain JHT21_04160 PF05166 YcgL domain JHT21_04165 PF13406 Transglycosylase SLT domain JHT21_04170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_04170 PF03466 LysR substrate binding domain JHT21_04175 PF07670 Nucleoside recognition JHT21_04175 PF07662 Na+ dependent nucleoside transporter C-terminus JHT21_04175 PF01773 Na+ dependent nucleoside transporter N-terminus JHT21_04180 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JHT21_04180 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JHT21_04195 PF00109 Beta-ketoacyl synthase, N-terminal domain JHT21_04195 PF02801 Beta-ketoacyl synthase, C-terminal domain JHT21_04205 PF07977 FabA-like domain JHT21_04210 PF02801 Beta-ketoacyl synthase, C-terminal domain JHT21_04210 PF00109 Beta-ketoacyl synthase, N-terminal domain JHT21_04235 PF00221 Aromatic amino acid lyase JHT21_04240 PF00535 Glycosyl transferase family 2 JHT21_04245 PF07977 FabA-like domain JHT21_04260 PF00550 Phosphopantetheine attachment site JHT21_04265 PF00550 Phosphopantetheine attachment site JHT21_04290 PF04820 Tryptophan halogenase JHT21_04300 PF01595 Cyclin M transmembrane N-terminal domain JHT21_04300 PF03471 Transporter associated domain JHT21_04300 PF00571 CBS domain JHT21_04305 PF00271 Helicase conserved C-terminal domain JHT21_04305 PF00270 DEAD/DEAH box helicase JHT21_04310 PF02080 TrkA-C domain JHT21_04310 PF02254 TrkA-N domain JHT21_04315 PF02386 Cation transport protein JHT21_04330 PF02696 Uncharacterized ACR, YdiU/UPF0061 family JHT21_04335 PF03480 Bacterial extracellular solute-binding protein, family 7 JHT21_04340 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component JHT21_04345 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JHT21_04355 PF00158 Sigma-54 interaction domain JHT21_04355 PF02954 Bacterial regulatory protein, Fis family JHT21_04355 PF00072 Response regulator receiver domain JHT21_04360 PF02743 Cache domain JHT21_04360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_04360 PF00512 His Kinase A (phospho-acceptor) domain JHT21_04370 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JHT21_04370 PF05698 Bacterial trigger factor protein (TF) C-terminus JHT21_04370 PF05697 Bacterial trigger factor protein (TF) JHT21_04375 PF00574 Clp protease JHT21_04380 PF10431 C-terminal, D2-small domain, of ClpB protein JHT21_04380 PF06689 ClpX C4-type zinc finger JHT21_04380 PF07724 AAA domain (Cdc48 subfamily) JHT21_04385 PF02190 ATP-dependent protease La (LON) substrate-binding domain JHT21_04385 PF00004 ATPase family associated with various cellular activities (AAA) JHT21_04385 PF05362 Lon protease (S16) C-terminal proteolytic domain JHT21_04390 PF00216 Bacterial DNA-binding protein JHT21_04395 PF13145 PPIC-type PPIASE domain JHT21_04415 PF01966 HD domain JHT21_04415 PF13286 Phosphohydrolase-associated domain JHT21_04425 PF00155 Aminotransferase class I and II JHT21_04430 PF00425 chorismate binding enzyme JHT21_04440 PF12697 Alpha/beta hydrolase family JHT21_04445 PF00378 Enoyl-CoA hydratase/isomerase JHT21_04450 PF13378 Enolase C-terminal domain-like JHT21_04455 PF00501 AMP-binding enzyme JHT21_04455 PF13193 AMP-binding enzyme C-terminal domain JHT21_04465 PF03601 Conserved hypothetical protein 698 JHT21_04470 PF07690 Major Facilitator Superfamily JHT21_04515 PF13533 Biotin-lipoyl like JHT21_04520 PF00873 AcrB/AcrD/AcrF family JHT21_04540 PF00291 Pyridoxal-phosphate dependent enzyme JHT21_04545 PF01037 Lrp/AsnC ligand binding domain JHT21_04545 PF13404 AsnC-type helix-turn-helix domain JHT21_04560 PF09619 Type III secretion system lipoprotein chaperone (YscW) JHT21_04565 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JHT21_04575 PF00990 Diguanylate cyclase, GGDEF domain JHT21_04575 PF17152 Periplasmic sensor domain JHT21_04585 PF08032 RNA 2'-O ribose methyltransferase substrate binding JHT21_04585 PF00588 SpoU rRNA Methylase family JHT21_04590 PF00037 4Fe-4S binding domain JHT21_04590 PF11953 Domain of unknown function (DUF3470) JHT21_04600 PF00478 IMP dehydrogenase / GMP reductase domain JHT21_04600 PF00571 CBS domain JHT21_04605 PF00403 Heavy-metal-associated domain JHT21_04610 PF01048 Phosphorylase superfamily JHT21_04620 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT21_04620 PF00672 HAMP domain JHT21_04625 PF01230 HIT domain JHT21_04640 PF08139 Prokaryotic membrane lipoprotein lipid attachment site JHT21_04640 PF13036 Peptidoglycan-synthase activator LpoB JHT21_04650 PF05728 Uncharacterised protein family (UPF0227) JHT21_04655 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHT21_04670 PF02559 CarD-like/TRCF domain JHT21_04670 PF00270 DEAD/DEAH box helicase JHT21_04670 PF00271 Helicase conserved C-terminal domain JHT21_04670 PF17757 UvrB interaction domain JHT21_04670 PF03461 TRCF domain JHT21_04680 PF12704 MacB-like periplasmic core domain JHT21_04680 PF02687 FtsX-like permease family JHT21_04685 PF00005 ABC transporter JHT21_04690 PF12704 MacB-like periplasmic core domain JHT21_04690 PF02687 FtsX-like permease family JHT21_04700 PF00753 Metallo-beta-lactamase superfamily JHT21_04700 PF13567 Domain of unknown function (DUF4131) JHT21_04700 PF03772 Competence protein JHT21_04705 PF00005 ABC transporter JHT21_04705 PF00664 ABC transporter transmembrane region JHT21_04710 PF02606 Tetraacyldisaccharide-1-P 4'-kinase JHT21_04715 PF03966 Trm112p-like protein JHT21_04720 PF02348 Cytidylyltransferase JHT21_04725 PF04293 SpoVR like protein JHT21_04730 PF04285 Protein of unknown function (DUF444) JHT21_04735 PF06798 PrkA serine protein kinase C-terminal domain JHT21_04735 PF08298 PrkA AAA domain JHT21_04740 PF03887 YfbU domain JHT21_04750 PF04055 Radical SAM superfamily JHT21_04760 PF02901 Pyruvate formate lyase-like JHT21_04760 PF01228 Glycine radical JHT21_04775 PF00005 ABC transporter JHT21_04780 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHT21_04785 PF00528 Binding-protein-dependent transport system inner membrane component JHT21_04790 PF00528 Binding-protein-dependent transport system inner membrane component JHT21_04800 PF03372 Endonuclease/Exonuclease/phosphatase family JHT21_04805 PF10689 Protein of unknown function (DUF2496) JHT21_04810 PF07445 Primosomal replication protein priC JHT21_04815 PF01925 Sulfite exporter TauE/SafE JHT21_04820 PF06733 DEAD_2 JHT21_04820 PF13307 Helicase C-terminal domain JHT21_04830 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) JHT21_04835 PF00849 RNA pseudouridylate synthase JHT21_04840 PF03971 Monomeric isocitrate dehydrogenase JHT21_04845 PF00313 'Cold-shock' DNA-binding domain JHT21_04850 PF02617 ATP-dependent Clp protease adaptor protein ClpS JHT21_04855 PF07724 AAA domain (Cdc48 subfamily) JHT21_04855 PF00004 ATPase family associated with various cellular activities (AAA) JHT21_04855 PF02861 Clp amino terminal domain, pathogenicity island component JHT21_04855 PF10431 C-terminal, D2-small domain, of ClpB protein JHT21_04855 PF17871 AAA lid domain JHT21_04865 PF01176 Translation initiation factor 1A / IF-1 JHT21_04870 PF04377 Arginine-tRNA-protein transferase, C terminus JHT21_04870 PF04376 Arginine-tRNA-protein transferase, N terminus JHT21_04875 PF03588 Leucyl/phenylalanyl-tRNA protein transferase JHT21_04885 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JHT21_04890 PF10692 Protein of unknown function (DUF2498) JHT21_04895 PF08272 Topoisomerase I zinc-ribbon-like JHT21_04895 PF01131 DNA topoisomerase JHT21_04895 PF01751 Toprim domain JHT21_04895 PF01396 Topoisomerase DNA binding C4 zinc finger JHT21_04900 PF00483 Nucleotidyl transferase JHT21_04905 PF08323 Starch synthase catalytic domain JHT21_04905 PF00534 Glycosyl transferases group 1 JHT21_04925 PF04994 TfoX C-terminal domain JHT21_04925 PF04993 TfoX N-terminal domain JHT21_04930 PF00356 Bacterial regulatory proteins, lacI family JHT21_04935 PF02613 Nitrate reductase delta subunit JHT21_04940 PF00486 Transcriptional regulatory protein, C terminal JHT21_04940 PF00072 Response regulator receiver domain JHT21_04945 PF02698 DUF218 domain JHT21_04950 PF13847 Methyltransferase domain JHT21_04955 PF17193 MukF C-terminal domain JHT21_04955 PF17192 MukF middle domain JHT21_04955 PF03882 MukF winged-helix domain JHT21_04960 PF04288 MukE-like family JHT21_04965 PF04310 MukB N-terminal JHT21_04965 PF16330 MukB hinge domain JHT21_04975 PF08443 RimK-like ATP-grasp domain JHT21_04975 PF18030 RimK PreATP-grasp domain JHT21_04985 PF18030 RimK PreATP-grasp domain JHT21_04985 PF08443 RimK-like ATP-grasp domain JHT21_04990 PF08003 Protein of unknown function (DUF1698) JHT21_04995 PF13649 Methyltransferase domain JHT21_05000 PF01904 Protein of unknown function DUF72 JHT21_05005 PF00152 tRNA synthetases class II (D, K and N) JHT21_05005 PF02938 GAD domain JHT21_05005 PF01336 OB-fold nucleic acid binding domain JHT21_05010 PF02075 Crossover junction endodeoxyribonuclease RuvC JHT21_05015 PF00672 HAMP domain JHT21_05015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT21_05015 PF02203 Tar ligand binding domain homologue JHT21_05020 PF07499 RuvA, C-terminal domain JHT21_05020 PF01330 RuvA N terminal domain JHT21_05025 PF17864 RuvB AAA lid domain JHT21_05025 PF05491 RuvB C-terminal winged helix domain JHT21_05025 PF05496 Holliday junction DNA helicase RuvB P-loop domain JHT21_05030 PF01654 Cytochrome bd terminal oxidase subunit I JHT21_05035 PF02322 Cytochrome bd terminal oxidase subunit II JHT21_05040 PF08173 Membrane bound YbgT-like protein JHT21_05050 PF03061 Thioesterase superfamily JHT21_05055 PF01618 MotA/TolQ/ExbB proton channel family JHT21_05060 PF02472 Biopolymer transport protein ExbD/TolR JHT21_05070 PF07676 WD40-like Beta Propeller Repeat JHT21_05070 PF04052 TolB amino-terminal domain JHT21_05075 PF00691 OmpA family JHT21_05080 PF16331 TolA binding protein trimerisation JHT21_05080 PF13174 Tetratricopeptide repeat JHT21_05085 PF02445 Quinolinate synthetase A protein JHT21_05095 PF03994 Domain of Unknown Function (DUF350) JHT21_05105 PF03738 Glutathionylspermidine synthase preATP-grasp JHT21_05115 PF00512 His Kinase A (phospho-acceptor) domain JHT21_05115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_05115 PF09308 LuxQ, periplasmic JHT21_05115 PF00072 Response regulator receiver domain JHT21_05120 PF06610 L-alanine exporter JHT21_05130 PF12729 Four helix bundle sensory module for signal transduction JHT21_05130 PF00672 HAMP domain JHT21_05130 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT21_05135 PF00529 HlyD membrane-fusion protein of T1SS JHT21_05135 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JHT21_05140 PF00873 AcrB/AcrD/AcrF family JHT21_05155 PF00579 tRNA synthetases class I (W and Y) JHT21_05165 PF03372 Endonuclease/Exonuclease/phosphatase family JHT21_05170 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) JHT21_05180 PF03466 LysR substrate binding domain JHT21_05180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_05190 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JHT21_05190 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JHT21_05195 PF01037 Lrp/AsnC ligand binding domain JHT21_05200 PF13491 4TM region of DNA translocase FtsK/SpoIIIE JHT21_05200 PF17854 FtsK alpha domain JHT21_05200 PF09397 Ftsk gamma domain JHT21_05200 PF01580 FtsK/SpoIIIE family JHT21_05205 PF03548 Outer membrane lipoprotein carrier protein LolA JHT21_05210 PF00004 ATPase family associated with various cellular activities (AAA) JHT21_05210 PF16193 AAA C-terminal domain JHT21_05210 PF12002 MgsA AAA+ ATPase C terminal JHT21_05215 PF02403 Seryl-tRNA synthetase N-terminal domain JHT21_05215 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JHT21_05225 PF01258 Prokaryotic dksA/traR C4-type zinc finger JHT21_05230 PF00202 Aminotransferase class-III JHT21_05235 PF06968 Biotin and Thiamin Synthesis associated domain JHT21_05235 PF04055 Radical SAM superfamily JHT21_05240 PF00155 Aminotransferase class I and II JHT21_05245 PF08241 Methyltransferase domain JHT21_05260 PF01435 Peptidase family M48 JHT21_05270 PF00106 short chain dehydrogenase JHT21_05305 PF08328 Adenylosuccinate lyase C-terminal JHT21_05305 PF00206 Lyase JHT21_05310 PF04356 Protein of unknown function (DUF489) JHT21_05325 PF00294 pfkB family carbohydrate kinase JHT21_05330 PF00816 H-NS histone family JHT21_05335 PF03553 Na+/H+ antiporter family JHT21_05345 PF00158 Sigma-54 interaction domain JHT21_05345 PF00072 Response regulator receiver domain JHT21_05345 PF02954 Bacterial regulatory protein, Fis family JHT21_05350 PF01634 ATP phosphoribosyltransferase JHT21_05350 PF08029 HisG, C-terminal domain JHT21_05355 PF00815 Histidinol dehydrogenase JHT21_05360 PF00155 Aminotransferase class I and II JHT21_05365 PF00475 Imidazoleglycerol-phosphate dehydratase JHT21_05365 PF08645 Polynucleotide kinase 3 phosphatase JHT21_05370 PF00117 Glutamine amidotransferase class-I JHT21_05375 PF00977 Histidine biosynthesis protein JHT21_05380 PF00977 Histidine biosynthesis protein JHT21_05385 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JHT21_05385 PF01502 Phosphoribosyl-AMP cyclohydrolase JHT21_05390 PF02810 SEC-C motif JHT21_05395 PF00563 EAL domain JHT21_05395 PF08668 HDOD domain JHT21_05400 PF00149 Calcineurin-like phosphoesterase JHT21_05405 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JHT21_05410 PF09190 DALR domain JHT21_05410 PF01406 tRNA synthetases class I (C) catalytic domain JHT21_05415 PF00265 Thymidine kinase JHT21_05420 PF02698 DUF218 domain JHT21_05445 PF01226 Formate/nitrite transporter JHT21_05455 PF03649 Uncharacterised protein family (UPF0014) JHT21_05460 PF06796 Periplasmic nitrate reductase protein NapE JHT21_05465 PF03264 NapC/NirT cytochrome c family, N-terminal region JHT21_05470 PF18364 Molybdopterin oxidoreductase N-terminal domain JHT21_05470 PF00384 Molybdopterin oxidoreductase JHT21_05470 PF01568 Molydopterin dinucleotide binding domain JHT21_05475 PF16874 Glycosyl hydrolase family 36 C-terminal domain JHT21_05475 PF16875 Glycosyl hydrolase family 36 N-terminal domain JHT21_05485 PF02833 DHHA2 domain JHT21_05485 PF01368 DHH family JHT21_05495 PF00005 ABC transporter JHT21_05500 PF00005 ABC transporter JHT21_05500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JHT21_05505 PF00528 Binding-protein-dependent transport system inner membrane component JHT21_05505 PF12911 N-terminal TM domain of oligopeptide transport permease C JHT21_05510 PF00528 Binding-protein-dependent transport system inner membrane component JHT21_05515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JHT21_05520 PF02954 Bacterial regulatory protein, Fis family JHT21_05520 PF00158 Sigma-54 interaction domain JHT21_05525 PF04012 PspA/IM30 family JHT21_05530 PF06667 Phage shock protein B JHT21_05540 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JHT21_05545 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JHT21_05550 PF00873 AcrB/AcrD/AcrF family JHT21_05555 PF03352 Methyladenine glycosylase JHT21_05560 PF03280 Proteobacterial lipase chaperone protein JHT21_05565 PF00561 alpha/beta hydrolase fold JHT21_05570 PF01053 Cys/Met metabolism PLP-dependent enzyme JHT21_05575 PF13091 PLD-like domain JHT21_05575 PF13396 Phospholipase_D-nuclease N-terminal JHT21_05580 PF00209 Sodium:neurotransmitter symporter family JHT21_05585 PF12729 Four helix bundle sensory module for signal transduction JHT21_05585 PF00672 HAMP domain JHT21_05585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT21_05590 PF00849 RNA pseudouridylate synthase JHT21_05600 PF00970 Oxidoreductase FAD-binding domain JHT21_05600 PF00111 2Fe-2S iron-sulfur cluster binding domain JHT21_05600 PF00175 Oxidoreductase NAD-binding domain JHT21_05605 PF03063 Prismane/CO dehydrogenase family JHT21_05610 PF00158 Sigma-54 interaction domain JHT21_05610 PF01590 GAF domain JHT21_05620 PF01066 CDP-alcohol phosphatidyltransferase JHT21_05625 PF00005 ABC transporter JHT21_05630 PF00528 Binding-protein-dependent transport system inner membrane component JHT21_05635 PF13416 Bacterial extracellular solute-binding protein JHT21_05640 PF09335 SNARE associated Golgi protein JHT21_05650 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JHT21_05650 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHT21_05660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_05660 PF00512 His Kinase A (phospho-acceptor) domain JHT21_05665 PF00196 Bacterial regulatory proteins, luxR family JHT21_05665 PF00072 Response regulator receiver domain JHT21_05675 PF06945 Protein of unknown function (DUF1289) JHT21_05685 PF02872 5'-nucleotidase, C-terminal domain JHT21_05685 PF00149 Calcineurin-like phosphoesterase JHT21_05700 PF01386 Ribosomal L25p family JHT21_05705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_05710 PF00072 Response regulator receiver domain JHT21_05710 PF00486 Transcriptional regulatory protein, C terminal JHT21_05720 PF04851 Type III restriction enzyme, res subunit JHT21_05720 PF00271 Helicase conserved C-terminal domain JHT21_05725 PF00849 RNA pseudouridylate synthase JHT21_05725 PF01479 S4 domain JHT21_05730 PF07690 Major Facilitator Superfamily JHT21_05740 PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB JHT21_05745 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) JHT21_05760 PF03264 NapC/NirT cytochrome c family, N-terminal region JHT21_05765 PF11066 Protein of unknown function (DUF2867) JHT21_05765 PF13460 NAD(P)H-binding JHT21_05770 PF01554 MatE JHT21_05775 PF00005 ABC transporter JHT21_05790 PF06965 Na+/H+ antiporter 1 JHT21_05795 PF16295 Tetracyclin repressor-like, C-terminal domain JHT21_05795 PF00440 Bacterial regulatory proteins, tetR family JHT21_05800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JHT21_05800 PF02770 Acyl-CoA dehydrogenase, middle domain JHT21_05800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JHT21_05800 PF09317 Domain of unknown function (DUF1974) JHT21_05805 PF07055 Enoyl reductase FAD binding domain JHT21_05805 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase JHT21_05805 PF12241 Trans-2-enoyl-CoA reductase catalytic region JHT21_05810 PF02080 TrkA-C domain JHT21_05810 PF06826 Predicted Permease Membrane Region JHT21_05815 PF00462 Glutaredoxin JHT21_05820 PF00465 Iron-containing alcohol dehydrogenase JHT21_05825 PF01418 Helix-turn-helix domain, rpiR family JHT21_05825 PF01380 SIS domain JHT21_05830 PF00282 Pyridoxal-dependent decarboxylase conserved domain JHT21_05840 PF03956 Lysine exporter LysO JHT21_05850 PF04994 TfoX C-terminal domain JHT21_05850 PF04993 TfoX N-terminal domain JHT21_05865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_05865 PF00512 His Kinase A (phospho-acceptor) domain JHT21_05865 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHT21_05875 PF00266 Aminotransferase class-V JHT21_05880 PF00291 Pyridoxal-phosphate dependent enzyme JHT21_05885 PF00005 ABC transporter JHT21_05885 PF00664 ABC transporter transmembrane region JHT21_05890 PF00005 ABC transporter JHT21_05890 PF00664 ABC transporter transmembrane region JHT21_05895 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHT21_05905 PF00266 Aminotransferase class-V JHT21_05915 PF00990 Diguanylate cyclase, GGDEF domain JHT21_05915 PF00072 Response regulator receiver domain JHT21_05920 PF00939 Sodium:sulfate symporter transmembrane region JHT21_05925 PF02698 DUF218 domain JHT21_05930 PF00390 Malic enzyme, N-terminal domain JHT21_05930 PF03949 Malic enzyme, NAD binding domain JHT21_05935 PF04408 Helicase associated domain (HA2) JHT21_05935 PF00270 DEAD/DEAH box helicase JHT21_05935 PF00271 Helicase conserved C-terminal domain JHT21_05935 PF08482 ATP-dependent helicase C-terminal JHT21_05940 PF02253 Phospholipase A1 JHT21_05950 PF09423 PhoD-like phosphatase JHT21_05950 PF16655 PhoD-like phosphatase, N-terminal domain JHT21_05955 PF01259 SAICAR synthetase JHT21_05975 PF00691 OmpA family JHT21_05975 PF05736 OprF membrane domain JHT21_05990 PF13183 4Fe-4S dicluster domain JHT21_05990 PF01565 FAD binding domain JHT21_05990 PF02913 FAD linked oxidases, C-terminal domain JHT21_05995 PF04191 Phospholipid methyltransferase JHT21_06005 PF00221 Aromatic amino acid lyase JHT21_06010 PF01175 Urocanase Rossmann-like domain JHT21_06010 PF17392 Urocanase C-terminal domain JHT21_06010 PF17391 Urocanase N-terminal domain JHT21_06015 PF00491 Arginase family JHT21_06020 PF01979 Amidohydrolase family JHT21_06025 PF00392 Bacterial regulatory proteins, gntR family JHT21_06025 PF07702 UTRA domain JHT21_06040 PF02824 TGS domain JHT21_06040 PF03129 Anticodon binding domain JHT21_06040 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JHT21_06040 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JHT21_06045 PF00707 Translation initiation factor IF-3, C-terminal domain JHT21_06045 PF05198 Translation initiation factor IF-3, N-terminal domain JHT21_06050 PF01632 Ribosomal protein L35 JHT21_06055 PF00453 Ribosomal protein L20 JHT21_06060 PF01906 Putative heavy-metal-binding JHT21_06090 PF00990 Diguanylate cyclase, GGDEF domain JHT21_06090 PF17158 Membrane-associated sensor, integral membrane domain JHT21_06095 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JHT21_06095 PF01409 tRNA synthetases class II core domain (F) JHT21_06100 PF03483 B3/4 domain JHT21_06100 PF03484 tRNA synthetase B5 domain JHT21_06100 PF03147 Ferredoxin-fold anticodon binding domain JHT21_06100 PF01588 Putative tRNA binding domain JHT21_06100 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JHT21_06110 PF00216 Bacterial DNA-binding protein JHT21_06120 PF05724 Thiopurine S-methyltransferase (TPMT) JHT21_06125 PF02222 ATP-grasp domain JHT21_06130 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region JHT21_06130 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JHT21_06135 PF04172 LrgB-like family JHT21_06140 PF03788 LrgA family JHT21_06145 PF08411 Exonuclease C-terminal JHT21_06145 PF00929 Exonuclease JHT21_06150 PF00375 Sodium:dicarboxylate symporter family JHT21_06155 PF13460 NAD(P)H-binding JHT21_06160 PF02277 Phosphoribosyltransferase JHT21_06165 PF02654 Cobalamin-5-phosphate synthase JHT21_06170 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase JHT21_06175 PF00300 Histidine phosphatase superfamily (branch 1) JHT21_06185 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family JHT21_06190 PF01032 FecCD transport family JHT21_06195 PF00005 ABC transporter JHT21_06215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_06215 PF03466 LysR substrate binding domain JHT21_06235 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JHT21_06240 PF16363 GDP-mannose 4,6 dehydratase JHT21_06245 PF04991 LicD family JHT21_06250 PF01863 Protein of unknown function DUF45 JHT21_06255 PF05971 RNA methyltransferase JHT21_06280 PF00171 Aldehyde dehydrogenase family JHT21_06285 PF05544 Proline racemase JHT21_06300 PF02423 Ornithine cyclodeaminase/mu-crystallin family JHT21_06305 PF00701 Dihydrodipicolinate synthetase family JHT21_06310 PF08402 TOBE domain JHT21_06310 PF00005 ABC transporter JHT21_06315 PF00528 Binding-protein-dependent transport system inner membrane component JHT21_06320 PF00528 Binding-protein-dependent transport system inner membrane component JHT21_06330 PF01752 Collagenase JHT21_06330 PF08453 Peptidase family M9 N-terminal JHT21_06335 PF00041 Fibronectin type III domain JHT21_06335 PF12561 ToxR activated gene A lipoprotein domain JHT21_06345 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JHT21_06345 PF00005 ABC transporter JHT21_06350 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JHT21_06350 PF00005 ABC transporter JHT21_06355 PF00528 Binding-protein-dependent transport system inner membrane component JHT21_06355 PF12911 N-terminal TM domain of oligopeptide transport permease C JHT21_06360 PF00528 Binding-protein-dependent transport system inner membrane component JHT21_06365 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JHT21_06370 PF07687 Peptidase dimerisation domain JHT21_06370 PF01546 Peptidase family M20/M25/M40 JHT21_06375 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JHT21_06380 PF04209 homogentisate 1,2-dioxygenase JHT21_06390 PF14497 Glutathione S-transferase, C-terminal domain JHT21_06390 PF02798 Glutathione S-transferase, N-terminal domain JHT21_06435 PF13533 Biotin-lipoyl like JHT21_06450 PF08543 Phosphomethylpyrimidine kinase JHT21_06455 PF03466 LysR substrate binding domain JHT21_06455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_06475 PF00300 Histidine phosphatase superfamily (branch 1) JHT21_06490 PF00939 Sodium:sulfate symporter transmembrane region JHT21_06495 PF00512 His Kinase A (phospho-acceptor) domain JHT21_06495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_06495 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHT21_06500 PF00072 Response regulator receiver domain JHT21_06500 PF00158 Sigma-54 interaction domain JHT21_06500 PF02954 Bacterial regulatory protein, Fis family JHT21_06505 PF03707 Bacterial signalling protein N terminal repeat JHT21_06505 PF00563 EAL domain JHT21_06505 PF00990 Diguanylate cyclase, GGDEF domain JHT21_06510 PF01966 HD domain JHT21_06510 PF11871 Domain of unknown function (DUF3391) JHT21_06515 PF01810 LysE type translocator JHT21_06520 PF11230 Protein of unknown function (DUF3029) JHT21_06525 PF04055 Radical SAM superfamily JHT21_06535 PF03741 Integral membrane protein TerC family JHT21_06540 PF01551 Peptidase family M23 JHT21_06540 PF08525 Opacity-associated protein A N-terminal motif JHT21_06540 PF01476 LysM domain JHT21_06565 PF00158 Sigma-54 interaction domain JHT21_06565 PF00072 Response regulator receiver domain JHT21_06565 PF02954 Bacterial regulatory protein, Fis family JHT21_06570 PF00004 ATPase family associated with various cellular activities (AAA) JHT21_06570 PF07724 AAA domain (Cdc48 subfamily) JHT21_06570 PF10431 C-terminal, D2-small domain, of ClpB protein JHT21_06570 PF17871 AAA lid domain JHT21_06575 PF05638 Type VI secretion system effector, Hcp JHT21_06580 PF04717 Type VI secretion system, phage-baseplate injector JHT21_06605 PF00069 Protein kinase domain JHT21_06620 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath JHT21_06630 PF05947 Type VI secretion system, TssF JHT21_06640 PF01037 Lrp/AsnC ligand binding domain JHT21_06670 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE JHT21_06730 PF01966 HD domain JHT21_06735 PF00465 Iron-containing alcohol dehydrogenase JHT21_06740 PF03222 Tryptophan/tyrosine permease family JHT21_06760 PF00005 ABC transporter JHT21_06760 PF00664 ABC transporter transmembrane region JHT21_06765 PF00664 ABC transporter transmembrane region JHT21_06765 PF00005 ABC transporter JHT21_06790 PF00012 Hsp70 protein JHT21_06795 PF00012 Hsp70 protein JHT21_06805 PF00990 Diguanylate cyclase, GGDEF domain JHT21_06805 PF17158 Membrane-associated sensor, integral membrane domain JHT21_06835 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JHT21_06835 PF00384 Molybdopterin oxidoreductase JHT21_06835 PF01568 Molydopterin dinucleotide binding domain JHT21_06840 PF13247 4Fe-4S dicluster domain JHT21_06840 PF12800 4Fe-4S binding domain JHT21_06845 PF04976 DMSO reductase anchor subunit (DmsC) JHT21_06850 PF02613 Nitrate reductase delta subunit JHT21_06860 PF02525 Flavodoxin-like fold JHT21_06865 PF00270 DEAD/DEAH box helicase JHT21_06865 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold JHT21_06865 PF00271 Helicase conserved C-terminal domain JHT21_06865 PF04408 Helicase associated domain (HA2) JHT21_06865 PF11898 Domain of unknown function (DUF3418) JHT21_06880 PF02028 BCCT, betaine/carnitine/choline family transporter JHT21_06890 PF02397 Bacterial sugar transferase JHT21_06895 PF00535 Glycosyl transferase family 2 JHT21_06900 PF00534 Glycosyl transferases group 1 JHT21_06900 PF13439 Glycosyltransferase Family 4 JHT21_06930 PF13439 Glycosyltransferase Family 4 JHT21_06930 PF00534 Glycosyl transferases group 1 JHT21_06935 PF13439 Glycosyltransferase Family 4 JHT21_06935 PF00534 Glycosyl transferases group 1 JHT21_06940 PF00158 Sigma-54 interaction domain JHT21_06940 PF02954 Bacterial regulatory protein, Fis family JHT21_06940 PF00072 Response regulator receiver domain JHT21_06955 PF02563 Polysaccharide biosynthesis/export protein JHT21_06955 PF10531 SLBB domain JHT21_06965 PF01740 STAS domain JHT21_06970 PF01068 ATP dependent DNA ligase domain JHT21_06970 PF14743 DNA ligase OB-like domain JHT21_06980 PF01554 MatE JHT21_06985 PF00677 Lumazine binding domain JHT21_06995 PF03881 Fructosamine kinase JHT21_07000 PF01339 CheB methylesterase JHT21_07000 PF00072 Response regulator receiver domain JHT21_07005 PF00990 Diguanylate cyclase, GGDEF domain JHT21_07005 PF05230 MASE2 domain JHT21_07015 PF00877 NlpC/P60 family JHT21_07020 PF17202 Single cache domain 3 JHT21_07020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT21_07020 PF00672 HAMP domain JHT21_07055 PF03942 DTW domain JHT21_07060 PF00480 ROK family JHT21_07070 PF03454 MoeA C-terminal region (domain IV) JHT21_07070 PF03453 MoeA N-terminal region (domain I and II) JHT21_07070 PF00994 Probable molybdopterin binding domain JHT21_07075 PF12804 MobA-like NTP transferase domain JHT21_07080 PF00005 ABC transporter JHT21_07080 PF08402 TOBE domain JHT21_07085 PF00528 Binding-protein-dependent transport system inner membrane component JHT21_07090 PF12849 PBP superfamily domain JHT21_07095 PF00158 Sigma-54 interaction domain JHT21_07095 PF00072 Response regulator receiver domain JHT21_07095 PF02954 Bacterial regulatory protein, Fis family JHT21_07100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_07100 PF00512 His Kinase A (phospho-acceptor) domain JHT21_07105 PF00005 ABC transporter JHT21_07105 PF12848 ABC transporter JHT21_07110 PF02634 FdhD/NarQ family JHT21_07130 PF02613 Nitrate reductase delta subunit JHT21_07140 PF01568 Molydopterin dinucleotide binding domain JHT21_07140 PF00384 Molybdopterin oxidoreductase JHT21_07140 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JHT21_07145 PF13247 4Fe-4S dicluster domain JHT21_07160 PF03527 RHS protein JHT21_07160 PF05593 RHS Repeat JHT21_07170 PF00909 Ammonium Transporter Family JHT21_07180 PF02146 Sir2 family JHT21_07185 PF13416 Bacterial extracellular solute-binding protein JHT21_07190 PF13416 Bacterial extracellular solute-binding protein JHT21_07195 PF00528 Binding-protein-dependent transport system inner membrane component JHT21_07200 PF00528 Binding-protein-dependent transport system inner membrane component JHT21_07205 PF00005 ABC transporter JHT21_07205 PF08402 TOBE domain JHT21_07225 PF01171 PP-loop family JHT21_07230 PF00582 Universal stress protein family JHT21_07235 PF13545 Crp-like helix-turn-helix domain JHT21_07235 PF00027 Cyclic nucleotide-binding domain JHT21_07250 PF00403 Heavy-metal-associated domain JHT21_07260 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JHT21_07260 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP JHT21_07275 PF00115 Cytochrome C and Quinol oxidase polypeptide I JHT21_07290 PF00072 Response regulator receiver domain JHT21_07290 PF09308 LuxQ, periplasmic JHT21_07290 PF00512 His Kinase A (phospho-acceptor) domain JHT21_07290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_07325 PF06303 MatP N-terminal domain JHT21_07325 PF17414 MatP C-terminal ribbon-helix-helix domain JHT21_07330 PF05362 Lon protease (S16) C-terminal proteolytic domain JHT21_07330 PF13654 AAA domain JHT21_07335 PF07977 FabA-like domain JHT21_07340 PF04957 Ribosome modulation factor JHT21_07350 PF16326 ABC transporter C-terminal domain JHT21_07350 PF00005 ABC transporter JHT21_07350 PF12848 ABC transporter JHT21_07360 PF02926 THUMP domain JHT21_07360 PF01170 Putative RNA methylase family UPF0020 JHT21_07360 PF10672 S-adenosylmethionine-dependent methyltransferase JHT21_07365 PF07126 Cell-division protein ZapC JHT21_07370 PF01180 Dihydroorotate dehydrogenase JHT21_07375 PF05088 Bacterial NAD-glutamate dehydrogenase JHT21_07385 PF11940 Domain of unknown function (DUF3458) Ig-like fold JHT21_07385 PF17432 Domain of unknown function (DUF3458_C) ARM repeats JHT21_07385 PF01433 Peptidase family M1 domain JHT21_07395 PF11818 C-terminal domain of tail specific protease (DUF3340) JHT21_07395 PF00595 PDZ domain JHT21_07395 PF03572 Peptidase family S41 JHT21_07395 PF17804 Tail specific protease N-terminal domain JHT21_07400 PF04352 ProQ/FINO family JHT21_07400 PF17516 ProQ C-terminal domain JHT21_07405 PF13185 GAF domain JHT21_07410 PF00664 ABC transporter transmembrane region JHT21_07410 PF00005 ABC transporter JHT21_07415 PF04403 Paraquat-inducible protein A JHT21_07420 PF02470 MlaD protein JHT21_07425 PF01189 16S rRNA methyltransferase RsmB/F JHT21_07425 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF JHT21_07425 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF JHT21_07445 PF00793 DAHP synthetase I family JHT21_07450 PF04461 Protein of unknown function (DUF520) JHT21_07455 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JHT21_07455 PF10414 Sirohaem synthase dimerisation region JHT21_07455 PF14824 Sirohaem biosynthesis protein central JHT21_07460 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHT21_07465 PF00528 Binding-protein-dependent transport system inner membrane component JHT21_07470 PF00528 Binding-protein-dependent transport system inner membrane component JHT21_07475 PF00005 ABC transporter JHT21_07480 PF01027 Inhibitor of apoptosis-promoting Bax1 JHT21_07490 PF04358 DsrC like protein JHT21_07495 PF00708 Acylphosphatase JHT21_07500 PF02743 Cache domain JHT21_07500 PF00672 HAMP domain JHT21_07500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT21_07505 PF10672 S-adenosylmethionine-dependent methyltransferase JHT21_07505 PF17785 PUA-like domain JHT21_07520 PF05736 OprF membrane domain JHT21_07520 PF00691 OmpA family JHT21_07535 PF00691 OmpA family JHT21_07535 PF05736 OprF membrane domain JHT21_07545 PF17158 Membrane-associated sensor, integral membrane domain JHT21_07545 PF00990 Diguanylate cyclase, GGDEF domain JHT21_07550 PF06508 Queuosine biosynthesis protein QueC JHT21_07555 PF04055 Radical SAM superfamily JHT21_07570 PF00089 Trypsin JHT21_07575 PF00583 Acetyltransferase (GNAT) family JHT21_07580 PF13193 AMP-binding enzyme C-terminal domain JHT21_07580 PF16177 Acetyl-coenzyme A synthetase N-terminus JHT21_07580 PF00501 AMP-binding enzyme JHT21_07585 PF04303 PrpF protein JHT21_07590 PF00694 Aconitase C-terminal domain JHT21_07590 PF00330 Aconitase family (aconitate hydratase) JHT21_07595 PF00285 Citrate synthase, C-terminal domain JHT21_07625 PF01970 Tripartite tricarboxylate transporter TctA family JHT21_07630 PF01925 Sulfite exporter TauE/SafE JHT21_07640 PF05844 YopD protein JHT21_07650 PF07720 Tetratricopeptide repeat JHT21_07655 PF04792 V antigen (LcrV) protein JHT21_07660 PF07216 LcrG protein JHT21_07665 PF09621 Type III secretion system regulator (LcrR) JHT21_07670 PF00771 FHIPEP family JHT21_07690 PF09059 TyeA JHT21_07695 PF07201 HrpJ-like domain JHT21_07700 PF18269 T3SS EscN ATPase C-terminal domain JHT21_07700 PF02874 ATP synthase alpha/beta family, beta-barrel domain JHT21_07700 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JHT21_07715 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JHT21_07720 PF00813 FliP family JHT21_07725 PF01313 Bacterial export proteins, family 3 JHT21_07730 PF01311 Bacterial export proteins, family 1 JHT21_07735 PF01312 FlhB HrpN YscU SpaS Family JHT21_07740 PF03466 LysR substrate binding domain JHT21_07740 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_07745 PF12146 Serine aminopeptidase, S33 JHT21_07750 PF12146 Serine aminopeptidase, S33 JHT21_07760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_07760 PF03466 LysR substrate binding domain JHT21_07795 PF02661 Fic/DOC family JHT21_07805 PF02108 Flagellar assembly protein FliH JHT21_07815 PF01514 Secretory protein of YscJ/FliF family JHT21_07820 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI JHT21_07830 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) JHT21_07835 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF JHT21_07845 PF16697 Inner membrane component of T3SS, cytoplasmic domain JHT21_07845 PF16693 Inner membrane component of T3SS, periplasmic domain JHT21_07850 PF00263 Bacterial type II and III secretion system protein JHT21_07850 PF03958 Bacterial type II/III secretion system short domain JHT21_07865 PF12833 Helix-turn-helix domain JHT21_07885 PF00171 Aldehyde dehydrogenase family JHT21_07890 PF02954 Bacterial regulatory protein, Fis family JHT21_07890 PF00158 Sigma-54 interaction domain JHT21_07890 PF01590 GAF domain JHT21_07905 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JHT21_07905 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JHT21_07910 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JHT21_07915 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JHT21_07915 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JHT21_07920 PF12431 Transcriptional regulator JHT21_07920 PF00072 Response regulator receiver domain JHT21_07925 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JHT21_07925 PF17203 Single cache domain 3 JHT21_07925 PF00989 PAS fold JHT21_07925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_07940 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JHT21_07955 PF03150 Di-haem cytochrome c peroxidase JHT21_07955 PF00034 Cytochrome c JHT21_07960 PF00696 Amino acid kinase family JHT21_07960 PF13840 ACT domain JHT21_07965 PF06339 Ectoine synthase JHT21_07970 PF00202 Aminotransferase class-III JHT21_07975 PF00583 Acetyltransferase (GNAT) family JHT21_07980 PF02028 BCCT, betaine/carnitine/choline family transporter JHT21_07995 PF00571 CBS domain JHT21_07995 PF00005 ABC transporter JHT21_08000 PF00528 Binding-protein-dependent transport system inner membrane component JHT21_08005 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JHT21_08015 PF00501 AMP-binding enzyme JHT21_08035 PF00072 Response regulator receiver domain JHT21_08035 PF00486 Transcriptional regulatory protein, C terminal JHT21_08040 PF08521 Two-component sensor kinase N-terminal JHT21_08040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_08040 PF00512 His Kinase A (phospho-acceptor) domain JHT21_08045 PF00884 Sulfatase JHT21_08070 PF01235 Sodium:alanine symporter family JHT21_08080 PF01810 LysE type translocator JHT21_08085 PF02074 Carboxypeptidase Taq (M32) metallopeptidase JHT21_08090 PF03279 Bacterial lipid A biosynthesis acyltransferase JHT21_08095 PF13520 Amino acid permease JHT21_08105 PF04204 Homoserine O-succinyltransferase JHT21_08120 PF03707 Bacterial signalling protein N terminal repeat JHT21_08120 PF00990 Diguanylate cyclase, GGDEF domain JHT21_08120 PF00563 EAL domain JHT21_08125 PF00672 HAMP domain JHT21_08125 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JHT21_08125 PF00512 His Kinase A (phospho-acceptor) domain JHT21_08125 PF01627 Hpt domain JHT21_08125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_08125 PF00072 Response regulator receiver domain JHT21_08140 PF12464 Maltose acetyltransferase JHT21_08140 PF00132 Bacterial transferase hexapeptide (six repeats) JHT21_08150 PF01928 CYTH domain JHT21_08160 PF04237 YjbR JHT21_08165 PF01047 MarR family JHT21_08175 PF12833 Helix-turn-helix domain JHT21_08180 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JHT21_08180 PF01411 tRNA synthetases class II (A) JHT21_08180 PF02272 DHHA1 domain JHT21_08190 PF00196 Bacterial regulatory proteins, luxR family JHT21_08190 PF00563 EAL domain JHT21_08195 PF01368 DHH family JHT21_08195 PF02833 DHHA2 domain JHT21_08200 PF00202 Aminotransferase class-III JHT21_08205 PF00171 Aldehyde dehydrogenase family JHT21_08210 PF04371 Porphyromonas-type peptidyl-arginine deiminase JHT21_08215 PF00795 Carbon-nitrogen hydrolase JHT21_08220 PF01266 FAD dependent oxidoreductase JHT21_08225 PF00171 Aldehyde dehydrogenase family JHT21_08230 PF07883 Cupin domain JHT21_08230 PF01381 Helix-turn-helix JHT21_08235 PF07722 Peptidase C26 JHT21_08240 PF00120 Glutamine synthetase, catalytic domain JHT21_08245 PF03553 Na+/H+ antiporter family JHT21_08305 PF05016 ParE toxin of type II toxin-antitoxin system, parDE JHT21_08320 PF02810 SEC-C motif JHT21_08320 PF07517 SecA DEAD-like domain JHT21_08320 PF01043 SecA preprotein cross-linking domain JHT21_08320 PF07516 SecA Wing and Scaffold domain JHT21_08350 PF13673 Acetyltransferase (GNAT) domain JHT21_08350 PF04229 GrpB protein JHT21_08410 PF01042 Endoribonuclease L-PSP JHT21_08495 PF01219 Prokaryotic diacylglycerol kinase JHT21_08500 PF00884 Sulfatase JHT21_08500 PF08019 Phosphoethanolamine transferase EptA/EptB JHT21_08515 PF07411 Domain of unknown function (DUF1508) JHT21_08545 PF00589 Phage integrase family JHT21_08555 PF01810 LysE type translocator JHT21_08625 PF00583 Acetyltransferase (GNAT) family JHT21_08705 PF01810 LysE type translocator JHT21_08715 PF01810 LysE type translocator JHT21_08915 PF13673 Acetyltransferase (GNAT) domain JHT21_08925 PF00583 Acetyltransferase (GNAT) family JHT21_08955 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JHT21_08965 PF01042 Endoribonuclease L-PSP JHT21_09185 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JHT21_09330 PF13495 Phage integrase, N-terminal SAM-like domain JHT21_09330 PF00589 Phage integrase family JHT21_09345 PF13302 Acetyltransferase (GNAT) domain JHT21_09350 PF18024 Helix-turn-helix domain JHT21_09350 PF00158 Sigma-54 interaction domain JHT21_09355 PF05128 Domain of unknown function (DUF697) JHT21_09360 PF04317 YcjX-like family, DUF463 JHT21_09375 PF04715 Anthranilate synthase component I, N terminal region JHT21_09375 PF00425 chorismate binding enzyme JHT21_09380 PF00512 His Kinase A (phospho-acceptor) domain JHT21_09380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_09380 PF09308 LuxQ, periplasmic JHT21_09380 PF00072 Response regulator receiver domain JHT21_09390 PF00293 NUDIX domain JHT21_09395 PF03222 Tryptophan/tyrosine permease family JHT21_09400 PF03313 Serine dehydratase alpha chain JHT21_09400 PF03315 Serine dehydratase beta chain JHT21_09405 PF04940 Sensors of blue-light using FAD JHT21_09405 PF00563 EAL domain JHT21_09415 PF01242 6-pyruvoyl tetrahydropterin synthase JHT21_09420 PF02743 Cache domain JHT21_09420 PF00672 HAMP domain JHT21_09420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT21_09425 PF00152 tRNA synthetases class II (D, K and N) JHT21_09425 PF01336 OB-fold nucleic acid binding domain JHT21_09435 PF00155 Aminotransferase class I and II JHT21_09435 PF00392 Bacterial regulatory proteins, gntR family JHT21_09450 PF00155 Aminotransferase class I and II JHT21_09470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT21_09470 PF00672 HAMP domain JHT21_09475 PF02028 BCCT, betaine/carnitine/choline family transporter JHT21_09480 PF01047 MarR family JHT21_09485 PF00196 Bacterial regulatory proteins, luxR family JHT21_09485 PF00072 Response regulator receiver domain JHT21_09490 PF07730 Histidine kinase JHT21_09490 PF17200 Single Cache domain 2 JHT21_09495 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JHT21_09505 PF03480 Bacterial extracellular solute-binding protein, family 7 JHT21_09520 PF00753 Metallo-beta-lactamase superfamily JHT21_09525 PF05951 Bacterial protein of unknown function (DUF882) JHT21_09530 PF03734 L,D-transpeptidase catalytic domain JHT21_09530 PF01471 Putative peptidoglycan binding domain JHT21_09555 PF00925 GTP cyclohydrolase II JHT21_09565 PF03918 Cytochrome C biogenesis protein JHT21_09570 PF08534 Redoxin JHT21_09575 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal JHT21_09575 PF01578 Cytochrome C assembly protein JHT21_09580 PF03916 Polysulphide reductase, NrfD JHT21_09585 PF13247 4Fe-4S dicluster domain JHT21_09595 PF02335 Cytochrome c552 JHT21_09610 PF03989 DNA gyrase C-terminal domain, beta-propeller JHT21_09610 PF00521 DNA gyrase/topoisomerase IV, subunit A JHT21_09620 PF03477 ATP cone domain JHT21_09620 PF00317 Ribonucleotide reductase, all-alpha domain JHT21_09620 PF02867 Ribonucleotide reductase, barrel domain JHT21_09625 PF00268 Ribonucleotide reductase, small chain JHT21_09635 PF00994 Probable molybdopterin binding domain JHT21_09650 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JHT21_09655 PF16653 Saccharopine dehydrogenase C-terminal domain JHT21_09655 PF03435 Saccharopine dehydrogenase NADP binding domain JHT21_09660 PF00202 Aminotransferase class-III JHT21_09685 PF01066 CDP-alcohol phosphatidyltransferase JHT21_09690 PF01541 GIY-YIG catalytic domain JHT21_09690 PF08459 UvrC Helix-hairpin-helix N-terminal JHT21_09690 PF02151 UvrB/uvrC motif JHT21_09695 PF00196 Bacterial regulatory proteins, luxR family JHT21_09695 PF00072 Response regulator receiver domain JHT21_09700 PF00136 DNA polymerase family B JHT21_09700 PF03104 DNA polymerase family B, exonuclease domain JHT21_09710 PF09285 Elongation factor P, C-terminal JHT21_09710 PF08207 Elongation factor P (EF-P) KOW-like domain JHT21_09710 PF01132 Elongation factor P (EF-P) OB domain JHT21_09715 PF04269 Protein of unknown function, DUF440 JHT21_09720 PF01479 S4 domain JHT21_09720 PF00849 RNA pseudouridylate synthase JHT21_09730 PF01300 Telomere recombination JHT21_09735 PF02811 PHP domain JHT21_09740 PF08056 Tryptophan operon leader peptide JHT21_09745 PF00425 chorismate binding enzyme JHT21_09745 PF04715 Anthranilate synthase component I, N terminal region JHT21_09750 PF00117 Glutamine amidotransferase class-I JHT21_09755 PF00591 Glycosyl transferase family, a/b domain JHT21_09755 PF02885 Glycosyl transferase family, helical bundle domain JHT21_09760 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase JHT21_09760 PF00218 Indole-3-glycerol phosphate synthase JHT21_09765 PF00291 Pyridoxal-phosphate dependent enzyme JHT21_09770 PF00290 Tryptophan synthase alpha chain JHT21_09775 PF13545 Crp-like helix-turn-helix domain JHT21_09775 PF00027 Cyclic nucleotide-binding domain JHT21_09780 PF13193 AMP-binding enzyme C-terminal domain JHT21_09780 PF00501 AMP-binding enzyme JHT21_09785 PF00375 Sodium:dicarboxylate symporter family JHT21_09790 PF17327 Acyl homoserine lactone synthase JHT21_09795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_09795 PF00072 Response regulator receiver domain JHT21_09805 PF04279 Intracellular septation protein A JHT21_09810 PF03061 Thioesterase superfamily JHT21_09815 PF03795 YCII-related domain JHT21_09825 PF01717 Cobalamin-independent synthase, Catalytic domain JHT21_09825 PF08267 Cobalamin-independent synthase, N-terminal domain JHT21_09830 PF03466 LysR substrate binding domain JHT21_09830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_09845 PF00360 Phytochrome region JHT21_09845 PF00990 Diguanylate cyclase, GGDEF domain JHT21_09845 PF01590 GAF domain JHT21_09845 PF00563 EAL domain JHT21_09850 PF08497 Radical SAM N-terminal JHT21_09850 PF04055 Radical SAM superfamily JHT21_09850 PF11842 Domain of unknown function (DUF3362) JHT21_09855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT21_09855 PF00672 HAMP domain JHT21_09860 PF00486 Transcriptional regulatory protein, C terminal JHT21_09860 PF00072 Response regulator receiver domain JHT21_09865 PF00672 HAMP domain JHT21_09865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_09865 PF00512 His Kinase A (phospho-acceptor) domain JHT21_09885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_09885 PF03466 LysR substrate binding domain JHT21_09890 PF00529 HlyD membrane-fusion protein of T1SS JHT21_09890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JHT21_09900 PF01717 Cobalamin-independent synthase, Catalytic domain JHT21_09900 PF08267 Cobalamin-independent synthase, N-terminal domain JHT21_09910 PF02311 AraC-like ligand binding domain JHT21_09910 PF12833 Helix-turn-helix domain JHT21_09915 PF00857 Isochorismatase family JHT21_09920 PF00005 ABC transporter JHT21_09920 PF02687 FtsX-like permease family JHT21_09920 PF12704 MacB-like periplasmic core domain JHT21_09925 PF00005 ABC transporter JHT21_09925 PF12704 MacB-like periplasmic core domain JHT21_09925 PF02687 FtsX-like permease family JHT21_09930 PF00005 ABC transporter JHT21_09930 PF02687 FtsX-like permease family JHT21_09930 PF12704 MacB-like periplasmic core domain JHT21_09940 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JHT21_09955 PF01938 TRAM domain JHT21_09955 PF05958 tRNA (Uracil-5-)-methyltransferase JHT21_09970 PF00085 Thioredoxin JHT21_09975 PF11412 Disulphide bond corrector protein DsbC JHT21_09975 PF02683 Cytochrome C biogenesis protein transmembrane region JHT21_09985 PF03466 LysR substrate binding domain JHT21_09985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_09990 PF00072 Response regulator receiver domain JHT21_09990 PF00196 Bacterial regulatory proteins, luxR family JHT21_09995 PF00512 His Kinase A (phospho-acceptor) domain JHT21_09995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_10000 PF13247 4Fe-4S dicluster domain JHT21_10005 PF03916 Polysulphide reductase, NrfD JHT21_10010 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JHT21_10010 PF00384 Molybdopterin oxidoreductase JHT21_10010 PF01568 Molydopterin dinucleotide binding domain JHT21_10015 PF00034 Cytochrome c JHT21_10020 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JHT21_10025 PF04403 Paraquat-inducible protein A JHT21_10030 PF02470 MlaD protein JHT21_10040 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase JHT21_10050 PF00535 Glycosyl transferase family 2 JHT21_10055 PF01370 NAD dependent epimerase/dehydratase family JHT21_10065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JHT21_10070 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JHT21_10075 PF18073 Rubredoxin metal binding domain JHT21_10080 PF06305 Lipopolysaccharide assembly protein A domain JHT21_10085 PF00216 Bacterial DNA-binding protein JHT21_10090 PF00575 S1 RNA binding domain JHT21_10095 PF02224 Cytidylate kinase JHT21_10100 PF01343 Peptidase family S49 JHT21_10100 PF08496 Peptidase family S49 N-terminal JHT21_10105 PF00106 short chain dehydrogenase JHT21_10120 PF14579 Helix-hairpin-helix motif JHT21_10120 PF07733 Bacterial DNA polymerase III alpha NTPase domain JHT21_10120 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JHT21_10120 PF01336 OB-fold nucleic acid binding domain JHT21_10120 PF02811 PHP domain JHT21_10125 PF00072 Response regulator receiver domain JHT21_10125 PF01584 CheW-like domain JHT21_10130 PF00480 ROK family JHT21_10135 PF02887 Pyruvate kinase, alpha/beta domain JHT21_10135 PF00224 Pyruvate kinase, barrel domain JHT21_10140 PF01734 Patatin-like phospholipase JHT21_10155 PF00209 Sodium:neurotransmitter symporter family JHT21_10170 PF00367 phosphotransferase system, EIIB JHT21_10170 PF02378 Phosphotransferase system, EIIC JHT21_10175 PF01026 TatD related DNase JHT21_10180 PF09115 DNA polymerase III, delta subunit, C terminal JHT21_10185 PF02223 Thymidylate kinase JHT21_10190 PF02618 YceG-like family JHT21_10195 PF01063 Amino-transferase class IV JHT21_10200 PF00109 Beta-ketoacyl synthase, N-terminal domain JHT21_10200 PF02801 Beta-ketoacyl synthase, C-terminal domain JHT21_10205 PF00550 Phosphopantetheine attachment site JHT21_10215 PF00698 Acyl transferase domain JHT21_10220 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JHT21_10220 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JHT21_10225 PF02504 Fatty acid synthesis protein JHT21_10230 PF01783 Ribosomal L32p protein family JHT21_10235 PF02620 Large ribosomal RNA subunit accumulation protein YceD JHT21_10240 PF02545 Maf-like protein JHT21_10245 PF00849 RNA pseudouridylate synthase JHT21_10245 PF01479 S4 domain JHT21_10250 PF10150 Ribonuclease E/G family JHT21_10250 PF12111 Polyribonucleotide phosphorylase C terminal JHT21_10250 PF00575 S1 RNA binding domain JHT21_10255 PF01740 STAS domain JHT21_10255 PF00916 Sulfate permease family JHT21_10260 PF01451 Low molecular weight phosphotyrosine protein phosphatase JHT21_10265 PF12557 Cob(I)alamin adenosyltransferase N terminal JHT21_10265 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP JHT21_10275 PF00485 Phosphoribulokinase / Uridine kinase family JHT21_10280 PF10609 NUBPL iron-transfer P-loop NTPase JHT21_10285 PF09334 tRNA synthetases class I (M) JHT21_10285 PF01588 Putative tRNA binding domain JHT21_10295 PF07840 FadR C-terminal domain JHT21_10295 PF00392 Bacterial regulatory proteins, gntR family JHT21_10300 PF06450 Bacterial Na+/H+ antiporter B (NhaB) JHT21_10305 PF02600 Disulfide bond formation protein DsbB JHT21_10310 PF01043 SecA preprotein cross-linking domain JHT21_10310 PF07517 SecA DEAD-like domain JHT21_10310 PF02810 SEC-C motif JHT21_10310 PF07516 SecA Wing and Scaffold domain JHT21_10315 PF01207 Dihydrouridine synthase (Dus) JHT21_10320 PF00990 Diguanylate cyclase, GGDEF domain JHT21_10320 PF00072 Response regulator receiver domain JHT21_10325 PF00128 Alpha amylase, catalytic domain JHT21_10325 PF02903 Alpha amylase, N-terminal ig-like domain JHT21_10330 PF00005 ABC transporter JHT21_10335 PF02653 Branched-chain amino acid transport system / permease component JHT21_10345 PF04217 Protein of unknown function, DUF412 JHT21_10350 PF00871 Acetokinase family JHT21_10355 PF07085 DRTGG domain JHT21_10355 PF01515 Phosphate acetyl/butaryl transferase JHT21_10360 PF13194 Domain of unknown function (DUF4010) JHT21_10370 PF13409 Glutathione S-transferase, N-terminal domain JHT21_10375 PF00005 ABC transporter JHT21_10375 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JHT21_10380 PF00005 ABC transporter JHT21_10380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JHT21_10385 PF12911 N-terminal TM domain of oligopeptide transport permease C JHT21_10385 PF00528 Binding-protein-dependent transport system inner membrane component JHT21_10390 PF00528 Binding-protein-dependent transport system inner membrane component JHT21_10395 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JHT21_10400 PF02391 MoaE protein JHT21_10405 PF02597 ThiS family JHT21_10410 PF01967 MoaC family JHT21_10415 PF00994 Probable molybdopterin binding domain JHT21_10420 PF04055 Radical SAM superfamily JHT21_10420 PF06463 Molybdenum Cofactor Synthesis C JHT21_10425 PF01933 Uncharacterised protein family UPF0052 JHT21_10430 PF01627 Hpt domain JHT21_10435 PF00158 Sigma-54 interaction domain JHT21_10435 PF00072 Response regulator receiver domain JHT21_10435 PF02954 Bacterial regulatory protein, Fis family JHT21_10440 PF12344 Ultra-violet resistance protein B JHT21_10440 PF02151 UvrB/uvrC motif JHT21_10440 PF00271 Helicase conserved C-terminal domain JHT21_10440 PF04851 Type III restriction enzyme, res subunit JHT21_10440 PF17757 UvrB interaction domain JHT21_10450 PF02508 Rnf-Nqr subunit, membrane protein JHT21_10455 PF04060 Putative Fe-S cluster JHT21_10460 PF12838 4Fe-4S dicluster domain JHT21_10460 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JHT21_10460 PF10531 SLBB domain JHT21_10460 PF13375 RnfC Barrel sandwich hybrid domain JHT21_10465 PF03116 NQR2, RnfD, RnfE family JHT21_10470 PF04205 FMN-binding domain JHT21_10475 PF02508 Rnf-Nqr subunit, membrane protein JHT21_10480 PF10576 Iron-sulfur binding domain of endonuclease III JHT21_10480 PF00633 Helix-hairpin-helix motif JHT21_10480 PF00730 HhH-GPD superfamily base excision DNA repair protein JHT21_10485 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JHT21_10490 PF10952 Protein of unknown function (DUF2753) JHT21_10495 PF00691 OmpA family JHT21_10495 PF18393 MotY N-terminal domain JHT21_10500 PF00929 Exonuclease JHT21_10505 PF03553 Na+/H+ antiporter family JHT21_10505 PF13726 Na+-H+ antiporter family JHT21_10515 PF00462 Glutaredoxin JHT21_10520 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JHT21_10520 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JHT21_10535 PF00465 Iron-containing alcohol dehydrogenase JHT21_10535 PF00171 Aldehyde dehydrogenase family JHT21_10540 PF01914 MarC family integral membrane protein JHT21_10545 PF00520 Ion transport protein JHT21_10545 PF00027 Cyclic nucleotide-binding domain JHT21_10550 PF01118 Semialdehyde dehydrogenase, NAD binding domain JHT21_10550 PF02774 Semialdehyde dehydrogenase, dimerisation domain JHT21_10555 PF03553 Na+/H+ antiporter family JHT21_10570 PF04245 37-kD nucleoid-associated bacterial protein JHT21_10575 PF07208 Protein of unknown function (DUF1414) JHT21_10580 PF00884 Sulfatase JHT21_10580 PF11893 Domain of unknown function (DUF3413) JHT21_10590 PF00850 Histone deacetylase domain JHT21_10595 PF00106 short chain dehydrogenase JHT21_10605 PF01131 DNA topoisomerase JHT21_10605 PF01751 Toprim domain JHT21_10610 PF00881 Nitroreductase family JHT21_10615 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JHT21_10615 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHT21_10620 PF01343 Peptidase family S49 JHT21_10625 PF17763 Glutaminase/Asparaginase C-terminal domain JHT21_10625 PF00710 Asparaginase, N-terminal JHT21_10630 PF07023 Protein of unknown function (DUF1315) JHT21_10640 PF01641 SelR domain JHT21_10645 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JHT21_10645 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JHT21_10650 PF01263 Aldose 1-epimerase JHT21_10655 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT21_10655 PF02743 Cache domain JHT21_10655 PF00672 HAMP domain JHT21_10660 PF13847 Methyltransferase domain JHT21_10675 PF00245 Alkaline phosphatase JHT21_10685 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JHT21_10690 PF03992 Antibiotic biosynthesis monooxygenase JHT21_10695 PF00924 Mechanosensitive ion channel JHT21_10695 PF05552 Conserved TM helix JHT21_10700 PF03692 Putative zinc- or iron-chelating domain JHT21_10705 PF04226 Transglycosylase associated protein JHT21_10710 PF03692 Putative zinc- or iron-chelating domain JHT21_10720 PF03313 Serine dehydratase alpha chain JHT21_10725 PF01042 Endoribonuclease L-PSP JHT21_10735 PF00230 Major intrinsic protein JHT21_10740 PF13662 Toprim domain JHT21_10740 PF02132 RecR protein JHT21_10745 PF02575 YbaB/EbfC DNA-binding family JHT21_10750 PF12170 DNA polymerase III tau subunit V interacting with alpha JHT21_10750 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding JHT21_10750 PF12169 DNA polymerase III subunits gamma and tau domain III JHT21_10755 PF00156 Phosphoribosyl transferase domain JHT21_10760 PF04304 Protein of unknown function (DUF454) JHT21_10765 PF00072 Response regulator receiver domain JHT21_10770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_10770 PF03466 LysR substrate binding domain JHT21_10775 PF01610 Transposase JHT21_10775 PF13542 Helix-turn-helix domain of transposase family ISL3 JHT21_10775 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 JHT21_10780 PF00156 Phosphoribosyl transferase domain JHT21_10785 PF02674 Colicin V production protein JHT21_10790 PF05036 Sporulation related domain JHT21_10795 PF08245 Mur ligase middle domain JHT21_10795 PF02875 Mur ligase family, glutamate ligase domain JHT21_10800 PF01039 Carboxyl transferase domain JHT21_10800 PF17848 Acetyl-coA carboxylase zinc finger domain JHT21_10805 PF01416 tRNA pseudouridine synthase JHT21_10815 PF01118 Semialdehyde dehydrogenase, NAD binding domain JHT21_10815 PF02774 Semialdehyde dehydrogenase, dimerisation domain JHT21_10820 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JHT21_10820 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JHT21_10820 PF11890 Domain of unknown function (DUF3410) JHT21_10825 PF00109 Beta-ketoacyl synthase, N-terminal domain JHT21_10825 PF02801 Beta-ketoacyl synthase, C-terminal domain JHT21_10830 PF01266 FAD dependent oxidoreductase JHT21_10830 PF05430 S-adenosyl-L-methionine-dependent methyltransferase JHT21_10835 PF03358 NADPH-dependent FMN reductase JHT21_10840 PF08891 YfcL protein JHT21_10845 PF04315 Elongation factor P hydroxylase JHT21_10850 PF03458 UPF0126 domain JHT21_10855 PF01264 Chorismate synthase JHT21_10860 PF05175 Methyltransferase small domain JHT21_10865 PF01713 Smr domain JHT21_10870 PF00300 Histidine phosphatase superfamily (branch 1) JHT21_10875 PF05193 Peptidase M16 inactive domain JHT21_10875 PF00675 Insulinase (Peptidase family M16) JHT21_10875 PF16187 Middle or third domain of peptidase_M16 JHT21_10885 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JHT21_10885 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JHT21_10885 PF00378 Enoyl-CoA hydratase/isomerase JHT21_10890 PF00108 Thiolase, N-terminal domain JHT21_10890 PF02803 Thiolase, C-terminal domain JHT21_10895 PF04542 Sigma-70 region 2 JHT21_10895 PF08281 Sigma-70, region 4 JHT21_10905 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) JHT21_10910 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) JHT21_10915 PF04333 MlaA lipoprotein JHT21_10925 PF03918 Cytochrome C biogenesis protein JHT21_10930 PF08534 Redoxin JHT21_10935 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal JHT21_10935 PF01578 Cytochrome C assembly protein JHT21_10940 PF03100 CcmE JHT21_10945 PF04995 Heme exporter protein D (CcmD) JHT21_10950 PF01578 Cytochrome C assembly protein JHT21_10955 PF03379 CcmB protein JHT21_10960 PF00005 ABC transporter JHT21_10970 PF01584 CheW-like domain JHT21_10980 PF13614 AAA domain JHT21_10985 PF01339 CheB methylesterase JHT21_10985 PF00072 Response regulator receiver domain JHT21_10990 PF01584 CheW-like domain JHT21_10990 PF02895 Signal transducing histidine kinase, homodimeric domain JHT21_10990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_10990 PF01627 Hpt domain JHT21_10990 PF00072 Response regulator receiver domain JHT21_10995 PF04344 Chemotaxis phosphatase, CheZ JHT21_11000 PF00072 Response regulator receiver domain JHT21_11005 PF04545 Sigma-70, region 4 JHT21_11005 PF04539 Sigma-70 region 3 JHT21_11005 PF04542 Sigma-70 region 2 JHT21_11010 PF10609 NUBPL iron-transfer P-loop NTPase JHT21_11015 PF00448 SRP54-type protein, GTPase domain JHT21_11020 PF00771 FHIPEP family JHT21_11025 PF01312 FlhB HrpN YscU SpaS Family JHT21_11030 PF01311 Bacterial export proteins, family 1 JHT21_11035 PF01313 Bacterial export proteins, family 3 JHT21_11040 PF00813 FliP family JHT21_11045 PF04347 Flagellar biosynthesis protein, FliO JHT21_11050 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JHT21_11055 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JHT21_11055 PF02154 Flagellar motor switch protein FliM JHT21_11075 PF18269 T3SS EscN ATPase C-terminal domain JHT21_11075 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JHT21_11085 PF14842 FliG N-terminal domain JHT21_11085 PF14841 FliG middle domain JHT21_11085 PF01706 FliG C-terminal domain JHT21_11090 PF08345 Flagellar M-ring protein C-terminal JHT21_11090 PF01514 Secretory protein of YscJ/FliF family JHT21_11095 PF02049 Flagellar hook-basal body complex protein FliE JHT21_11100 PF00072 Response regulator receiver domain JHT21_11100 PF00158 Sigma-54 interaction domain JHT21_11100 PF02954 Bacterial regulatory protein, Fis family JHT21_11105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_11105 PF00512 His Kinase A (phospho-acceptor) domain JHT21_11105 PF13188 PAS domain JHT21_11110 PF00158 Sigma-54 interaction domain JHT21_11110 PF02954 Bacterial regulatory protein, Fis family JHT21_11110 PF06490 Flagellar regulatory protein FleQ JHT21_11115 PF02561 Flagellar protein FliS JHT21_11125 PF07196 Flagellin hook IN motif JHT21_11125 PF07195 Flagellar hook-associated protein 2 C-terminus JHT21_11125 PF02465 Flagellar hook-associated protein 2 N-terminus JHT21_11130 PF03646 FlaG protein JHT21_11135 PF00669 Bacterial flagellin N-terminal helical region JHT21_11135 PF00700 Bacterial flagellin C-terminal helical region JHT21_11135 PF07196 Flagellin hook IN motif JHT21_11140 PF00669 Bacterial flagellin N-terminal helical region JHT21_11140 PF00700 Bacterial flagellin C-terminal helical region JHT21_11140 PF07196 Flagellin hook IN motif JHT21_11145 PF00700 Bacterial flagellin C-terminal helical region JHT21_11145 PF07196 Flagellin hook IN motif JHT21_11145 PF00669 Bacterial flagellin N-terminal helical region JHT21_11150 PF04261 Dyp-type peroxidase family JHT21_11155 PF11143 Protein of unknown function (DUF2919) JHT21_11175 PF03960 ArsC family JHT21_11180 PF07687 Peptidase dimerisation domain JHT21_11180 PF01546 Peptidase family M20/M25/M40 JHT21_11195 PF06804 NlpB/DapX lipoprotein JHT21_11200 PF00701 Dihydrodipicolinate synthetase family JHT21_11205 PF01842 ACT domain JHT21_11210 PF00578 AhpC/TSA family JHT21_11215 PF01594 AI-2E family transporter JHT21_11225 PF01435 Peptidase family M48 JHT21_11225 PF13181 Tetratricopeptide repeat JHT21_11230 PF03960 ArsC family JHT21_11235 PF03358 NADPH-dependent FMN reductase JHT21_11250 PF00860 Permease family JHT21_11260 PF00586 AIR synthase related protein, N-terminal domain JHT21_11260 PF02769 AIR synthase related protein, C-terminal domain JHT21_11265 PF00551 Formyl transferase JHT21_11270 PF13230 Glutamine amidotransferases class-II JHT21_11275 PF13580 SIS domain JHT21_11280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JHT21_11280 PF09317 Domain of unknown function (DUF1974) JHT21_11280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JHT21_11280 PF02770 Acyl-CoA dehydrogenase, middle domain JHT21_11285 PF01740 STAS domain JHT21_11285 PF00916 Sulfate permease family JHT21_11295 PF00929 Exonuclease JHT21_11300 PF00075 RNase H JHT21_11305 PF08241 Methyltransferase domain JHT21_11310 PF16123 Hydroxyacylglutathione hydrolase C-terminus JHT21_11310 PF00753 Metallo-beta-lactamase superfamily JHT21_11315 PF01476 LysM domain JHT21_11315 PF01464 Transglycosylase SLT domain JHT21_11325 PF03372 Endonuclease/Exonuclease/phosphatase family JHT21_11330 PF00543 Nitrogen regulatory protein P-II JHT21_11335 PF00034 Cytochrome c JHT21_11340 PF01171 PP-loop family JHT21_11340 PF09179 TilS substrate binding domain JHT21_11340 PF11734 TilS substrate C-terminal domain JHT21_11345 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JHT21_11350 PF14579 Helix-hairpin-helix motif JHT21_11350 PF07733 Bacterial DNA polymerase III alpha NTPase domain JHT21_11350 PF01336 OB-fold nucleic acid binding domain JHT21_11350 PF02811 PHP domain JHT21_11350 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JHT21_11355 PF01351 Ribonuclease HII JHT21_11360 PF02684 Lipid-A-disaccharide synthetase JHT21_11365 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 JHT21_11365 PF00132 Bacterial transferase hexapeptide (six repeats) JHT21_11370 PF07977 FabA-like domain JHT21_11375 PF00132 Bacterial transferase hexapeptide (six repeats) JHT21_11375 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD JHT21_11380 PF03938 Outer membrane protein (OmpH-like) JHT21_11385 PF07244 Surface antigen variable number repeat JHT21_11385 PF01103 Surface antigen JHT21_11390 PF17820 PDZ domain JHT21_11390 PF02163 Peptidase family M50 JHT21_11395 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JHT21_11395 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JHT21_11395 PF13288 DXP reductoisomerase C-terminal domain JHT21_11405 PF01255 Putative undecaprenyl diphosphate synthase JHT21_11410 PF01765 Ribosome recycling factor JHT21_11415 PF00696 Amino acid kinase family JHT21_11420 PF00889 Elongation factor TS JHT21_11425 PF00318 Ribosomal protein S2 JHT21_11430 PF00557 Metallopeptidase family M24 JHT21_11435 PF01842 ACT domain JHT21_11435 PF08335 GlnD PII-uridylyltransferase JHT21_11435 PF01966 HD domain JHT21_11435 PF01909 Nucleotidyltransferase domain JHT21_11440 PF11944 Protein of unknown function (DUF3461) JHT21_11445 PF00849 RNA pseudouridylate synthase JHT21_11450 PF04287 tRNA pseudouridine synthase C JHT21_11475 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 JHT21_11480 PF03806 AbgT putative transporter family JHT21_11485 PF00444 Ribosomal protein L36 JHT21_11490 PF01197 Ribosomal protein L31 JHT21_11495 PF18389 TrmO C-terminal domain JHT21_11495 PF01980 tRNA-methyltransferase O JHT21_11500 PF03129 Anticodon binding domain JHT21_11500 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JHT21_11500 PF04073 Aminoacyl-tRNA editing domain JHT21_11510 PF06786 Uncharacterised protein family (UPF0253) JHT21_11520 PF00209 Sodium:neurotransmitter symporter family JHT21_11535 PF01272 Transcription elongation factor, GreA/GreB, C-term JHT21_11535 PF03449 Transcription elongation factor, N-terminal JHT21_11540 PF09382 RQC domain JHT21_11540 PF16124 RecQ zinc-binding JHT21_11540 PF00271 Helicase conserved C-terminal domain JHT21_11540 PF00570 HRDC domain JHT21_11540 PF00270 DEAD/DEAH box helicase JHT21_11545 PF00817 impB/mucB/samB family JHT21_11545 PF11799 impB/mucB/samB family C-terminal domain JHT21_11545 PF11798 IMS family HHH motif JHT21_11560 PF02424 ApbE family JHT21_11565 PF00970 Oxidoreductase FAD-binding domain JHT21_11565 PF00111 2Fe-2S iron-sulfur cluster binding domain JHT21_11565 PF00175 Oxidoreductase NAD-binding domain JHT21_11570 PF02508 Rnf-Nqr subunit, membrane protein JHT21_11575 PF02508 Rnf-Nqr subunit, membrane protein JHT21_11580 PF04205 FMN-binding domain JHT21_11585 PF03116 NQR2, RnfD, RnfE family JHT21_11590 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) JHT21_11590 PF11973 NQRA C-terminal domain JHT21_11595 PF01722 BolA-like protein JHT21_11600 PF05175 Methyltransferase small domain JHT21_11605 PF03923 Uncharacterized lipoprotein JHT21_11605 PF08139 Prokaryotic membrane lipoprotein lipid attachment site JHT21_11610 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JHT21_11615 PF07690 Major Facilitator Superfamily JHT21_11625 PF04542 Sigma-70 region 2 JHT21_11625 PF04545 Sigma-70, region 4 JHT21_11640 PF03502 Nucleoside-specific channel-forming protein, Tsx JHT21_11645 PF02558 Ketopantoate reductase PanE/ApbA JHT21_11645 PF08546 Ketopantoate reductase PanE/ApbA C terminal JHT21_11650 PF01965 DJ-1/PfpI family JHT21_11655 PF00266 Aminotransferase class-V JHT21_11660 PF00990 Diguanylate cyclase, GGDEF domain JHT21_11660 PF17158 Membrane-associated sensor, integral membrane domain JHT21_11665 PF02657 Fe-S metabolism associated domain JHT21_11670 PF00899 ThiF family JHT21_11675 PF06725 3D domain JHT21_11675 PF03562 MltA specific insert domain JHT21_11685 PF00696 Amino acid kinase family JHT21_11685 PF00583 Acetyltransferase (GNAT) family JHT21_11695 PF13538 UvrD-like helicase C-terminal domain JHT21_11700 PF12705 PD-(D/E)XK nuclease superfamily JHT21_11700 PF00580 UvrD/REP helicase N-terminal domain JHT21_11700 PF13361 UvrD-like helicase C-terminal domain JHT21_11705 PF17946 RecC C-terminal domain JHT21_11710 PF11893 Domain of unknown function (DUF3413) JHT21_11710 PF00884 Sulfatase JHT21_11720 PF03466 LysR substrate binding domain JHT21_11720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_11725 PF07130 YebG protein JHT21_11730 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle JHT21_11730 PF14602 Hexapeptide repeat of succinyl-transferase JHT21_11735 PF03009 Glycerophosphoryl diester phosphodiesterase family JHT21_11740 PF07690 Major Facilitator Superfamily JHT21_11745 PF00230 Major intrinsic protein JHT21_11750 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JHT21_11750 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JHT21_11760 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JHT21_11760 PF01266 FAD dependent oxidoreductase JHT21_11765 PF01544 CorA-like Mg2+ transporter protein JHT21_11780 PF01588 Putative tRNA binding domain JHT21_11785 PF00356 Bacterial regulatory proteins, lacI family JHT21_11790 PF07733 Bacterial DNA polymerase III alpha NTPase domain JHT21_11790 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JHT21_11790 PF14579 Helix-hairpin-helix motif JHT21_11790 PF02811 PHP domain JHT21_11790 PF00929 Exonuclease JHT21_11800 PF00474 Sodium:solute symporter family JHT21_11805 PF01263 Aldose 1-epimerase JHT21_11810 PF10509 Galactokinase galactose-binding signature JHT21_11810 PF08544 GHMP kinases C terminal JHT21_11810 PF00288 GHMP kinases N terminal domain JHT21_11815 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain JHT21_11815 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain JHT21_11820 PF16363 GDP-mannose 4,6 dehydratase JHT21_11825 PF00356 Bacterial regulatory proteins, lacI family JHT21_11830 PF02929 Beta galactosidase small chain JHT21_11830 PF16353 Domain of unknown function(DUF4981) JHT21_11830 PF00703 Glycosyl hydrolases family 2 JHT21_11830 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JHT21_11830 PF02837 Glycosyl hydrolases family 2, sugar binding domain JHT21_11835 PF04074 YhcH/YjgK/YiaL JHT21_11840 PF13520 Amino acid permease JHT21_11845 PF03466 LysR substrate binding domain JHT21_11845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_11875 PF00437 Type II/IV secretion system protein JHT21_11905 PF13629 Pilus formation protein N terminal region JHT21_11905 PF00263 Bacterial type II and III secretion system protein JHT21_11905 PF04972 BON domain JHT21_11930 PF12833 Helix-turn-helix domain JHT21_11930 PF02805 Metal binding domain of Ada JHT21_11935 PF00501 AMP-binding enzyme JHT21_11945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_11945 PF03466 LysR substrate binding domain JHT21_11950 PF03764 Elongation factor G, domain IV JHT21_11950 PF00009 Elongation factor Tu GTP binding domain JHT21_11950 PF03144 Elongation factor Tu domain 2 JHT21_11950 PF14492 Elongation Factor G, domain II JHT21_11950 PF00679 Elongation factor G C-terminus JHT21_11955 PF18073 Rubredoxin metal binding domain JHT21_11965 PF18429 Domain of unknown function (DUF5609) JHT21_11975 PF01048 Phosphorylase superfamily JHT21_11980 PF01676 Metalloenzyme superfamily JHT21_11985 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain JHT21_11985 PF00591 Glycosyl transferase family, a/b domain JHT21_11985 PF02885 Glycosyl transferase family, helical bundle domain JHT21_11990 PF01791 DeoC/LacD family aldolase JHT21_11995 PF07662 Na+ dependent nucleoside transporter C-terminus JHT21_11995 PF07670 Nucleoside recognition JHT21_11995 PF01773 Na+ dependent nucleoside transporter N-terminus JHT21_12000 PF01026 TatD related DNase JHT21_12010 PF03144 Elongation factor Tu domain 2 JHT21_12010 PF00009 Elongation factor Tu GTP binding domain JHT21_12010 PF16658 Class II release factor RF3, C-terminal domain JHT21_12030 PF13508 Acetyltransferase (GNAT) domain JHT21_12035 PF02036 SCP-2 sterol transfer family JHT21_12040 PF00990 Diguanylate cyclase, GGDEF domain JHT21_12040 PF03707 Bacterial signalling protein N terminal repeat JHT21_12040 PF00563 EAL domain JHT21_12045 PF01136 Peptidase family U32 JHT21_12050 PF01136 Peptidase family U32 JHT21_12055 PF01554 MatE JHT21_12065 PF07719 Tetratricopeptide repeat JHT21_12065 PF13181 Tetratricopeptide repeat JHT21_12070 PF00575 S1 RNA binding domain JHT21_12070 PF03725 3' exoribonuclease family, domain 2 JHT21_12070 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JHT21_12070 PF01138 3' exoribonuclease family, domain 1 JHT21_12070 PF00013 KH domain JHT21_12075 PF00312 Ribosomal protein S15 JHT21_12080 PF09157 Pseudouridine synthase II TruB, C-terminal JHT21_12080 PF16198 tRNA pseudouridylate synthase B C-terminal domain JHT21_12080 PF01509 TruB family pseudouridylate synthase (N terminal domain) JHT21_12085 PF02033 Ribosome-binding factor A JHT21_12090 PF11987 Translation-initiation factor 2 JHT21_12090 PF00009 Elongation factor Tu GTP binding domain JHT21_12090 PF08364 Bacterial translation initiation factor IF-2 associated region JHT21_12090 PF04760 Translation initiation factor IF-2, N-terminal region JHT21_12095 PF08529 NusA N-terminal domain JHT21_12095 PF13184 NusA-like KH domain JHT21_12095 PF00575 S1 RNA binding domain JHT21_12100 PF02576 RimP N-terminal domain JHT21_12100 PF17384 RimP C-terminal SH3 domain JHT21_12115 PF03840 Preprotein translocase SecG subunit JHT21_12120 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JHT21_12120 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JHT21_12120 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JHT21_12120 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JHT21_12125 PF00809 Pterin binding enzyme JHT21_12130 PF06480 FtsH Extracellular JHT21_12130 PF01434 Peptidase family M41 JHT21_12130 PF00004 ATPase family associated with various cellular activities (AAA) JHT21_12130 PF17862 AAA+ lid domain JHT21_12135 PF01728 FtsJ-like methyltransferase JHT21_12140 PF01985 CRS1 / YhbY (CRM) domain JHT21_12145 PF01272 Transcription elongation factor, GreA/GreB, C-term JHT21_12145 PF03449 Transcription elongation factor, N-terminal JHT21_12150 PF13609 Gram-negative porin JHT21_12155 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family JHT21_12165 PF00579 tRNA synthetases class I (W and Y) JHT21_12170 PF01476 LysM domain JHT21_12170 PF01551 Peptidase family M23 JHT21_12170 PF08525 Opacity-associated protein A N-terminal motif JHT21_12175 PF00873 AcrB/AcrD/AcrF family JHT21_12185 PF01521 Iron-sulphur cluster biosynthesis JHT21_12190 PF00202 Aminotransferase class-III JHT21_12195 PF01594 AI-2E family transporter JHT21_12200 PF05175 Methyltransferase small domain JHT21_12200 PF08468 Methyltransferase small domain N-terminal JHT21_12205 PF00072 Response regulator receiver domain JHT21_12205 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHT21_12205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_12205 PF00512 His Kinase A (phospho-acceptor) domain JHT21_12210 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JHT21_12215 PF00528 Binding-protein-dependent transport system inner membrane component JHT21_12220 PF00528 Binding-protein-dependent transport system inner membrane component JHT21_12220 PF12911 N-terminal TM domain of oligopeptide transport permease C JHT21_12225 PF00005 ABC transporter JHT21_12225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JHT21_12230 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JHT21_12230 PF00005 ABC transporter JHT21_12240 PF01869 BadF/BadG/BcrA/BcrD ATPase family JHT21_12245 PF02838 Glycosyl hydrolase family 20, domain 2 JHT21_12245 PF00728 Glycosyl hydrolase family 20, catalytic domain JHT21_12250 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain JHT21_12250 PF06165 Glycosyltransferase family 36 JHT21_12255 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JHT21_12255 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JHT21_12255 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JHT21_12255 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JHT21_12260 PF00005 ABC transporter JHT21_12260 PF08402 TOBE domain JHT21_12270 PF13416 Bacterial extracellular solute-binding protein JHT21_12275 PF00909 Ammonium Transporter Family JHT21_12280 PF00543 Nitrogen regulatory protein P-II JHT21_12285 PF06062 Uncharacterised protein family (UPF0231) JHT21_12290 PF00330 Aconitase family (aconitate hydratase) JHT21_12290 PF06434 Aconitate hydratase 2 N-terminus JHT21_12290 PF11791 Aconitate B N-terminal domain JHT21_12295 PF01734 Patatin-like phospholipase JHT21_12300 PF00912 Transglycosylase JHT21_12300 PF00905 Penicillin binding protein transpeptidase domain JHT21_12300 PF14814 Bifunctional transglycosylase second domain JHT21_12305 PF00271 Helicase conserved C-terminal domain JHT21_12305 PF08482 ATP-dependent helicase C-terminal JHT21_12305 PF04408 Helicase associated domain (HA2) JHT21_12305 PF00270 DEAD/DEAH box helicase JHT21_12310 PF17746 SfsA N-terminal OB domain JHT21_12310 PF03749 Sugar fermentation stimulation protein RE domain JHT21_12315 PF01258 Prokaryotic dksA/traR C4-type zinc finger JHT21_12320 PF00749 tRNA synthetases class I (E and Q), catalytic domain JHT21_12325 PF12626 Polymerase A arginine-rich C-terminus JHT21_12325 PF01743 Poly A polymerase head domain JHT21_12325 PF12627 Probable RNA and SrmB- binding site of polymerase A JHT21_12330 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JHT21_12335 PF02548 Ketopantoate hydroxymethyltransferase JHT21_12340 PF02569 Pantoate-beta-alanine ligase JHT21_12345 PF03279 Bacterial lipid A biosynthesis acyltransferase JHT21_12350 PF01061 ABC-2 type transporter JHT21_12355 PF00005 ABC transporter JHT21_12360 PF01740 STAS domain JHT21_12360 PF00916 Sulfate permease family JHT21_12365 PF00484 Carbonic anhydrase JHT21_12370 PF00156 Phosphoribosyl transferase domain JHT21_12375 PF00440 Bacterial regulatory proteins, tetR family JHT21_12380 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHT21_12380 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JHT21_12385 PF02817 e3 binding domain JHT21_12385 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JHT21_12385 PF00364 Biotin-requiring enzyme JHT21_12390 PF00456 Transketolase, thiamine diphosphate binding domain JHT21_12390 PF17831 Pyruvate dehydrogenase E1 component middle domain JHT21_12395 PF07729 FCD domain JHT21_12395 PF00392 Bacterial regulatory proteins, gntR family JHT21_12400 PF01510 N-acetylmuramoyl-L-alanine amidase JHT21_12405 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JHT21_12405 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JHT21_12410 PF07963 Prokaryotic N-terminal methylation motif JHT21_12415 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JHT21_12415 PF00437 Type II/IV secretion system protein JHT21_12420 PF00482 Type II secretion system (T2SS), protein F JHT21_12425 PF01478 Type IV leader peptidase family JHT21_12425 PF06750 Bacterial Peptidase A24 N-terminal domain JHT21_12430 PF01121 Dephospho-CoA kinase JHT21_12435 PF07072 Cell division protein JHT21_12440 PF03884 DNA gyrase inhibitor YacG JHT21_12445 PF01245 Ribosomal protein L19 JHT21_12450 PF01746 tRNA (Guanine-1)-methyltransferase JHT21_12455 PF05239 PRC-barrel domain JHT21_12455 PF01782 RimM N-terminal domain JHT21_12460 PF00886 Ribosomal protein S16 JHT21_12465 PF02978 Signal peptide binding domain JHT21_12465 PF00448 SRP54-type protein, GTPase domain JHT21_12465 PF02881 SRP54-type protein, helical bundle domain JHT21_12470 PF01578 Cytochrome C assembly protein JHT21_12475 PF00571 CBS domain JHT21_12475 PF03471 Transporter associated domain JHT21_12475 PF01595 Cyclin M transmembrane N-terminal domain JHT21_12480 PF02664 S-Ribosylhomocysteinase (LuxS) JHT21_12490 PF04262 Glutamate-cysteine ligase JHT21_12495 PF05193 Peptidase M16 inactive domain JHT21_12495 PF00675 Insulinase (Peptidase family M16) JHT21_12500 PF09335 SNARE associated Golgi protein JHT21_12505 PF00107 Zinc-binding dehydrogenase JHT21_12505 PF08240 Alcohol dehydrogenase GroES-like domain JHT21_12510 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit JHT21_12515 PF00364 Biotin-requiring enzyme JHT21_12515 PF00682 HMGL-like JHT21_12515 PF02436 Conserved carboxylase domain JHT21_12520 PF04277 Oxaloacetate decarboxylase, gamma chain JHT21_12565 PF02599 Global regulator protein family JHT21_12570 PF01842 ACT domain JHT21_12570 PF00696 Amino acid kinase family JHT21_12570 PF13840 ACT domain JHT21_12575 PF02272 DHHA1 domain JHT21_12575 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JHT21_12575 PF01411 tRNA synthetases class II (A) JHT21_12580 PF02631 RecX family JHT21_12585 PF00154 recA bacterial DNA recombination protein JHT21_12590 PF02464 Competence-damaged protein JHT21_12595 PF01624 MutS domain I JHT21_12595 PF05188 MutS domain II JHT21_12595 PF05192 MutS domain III JHT21_12595 PF05190 MutS family domain IV JHT21_12595 PF00488 MutS domain V JHT21_12600 PF04545 Sigma-70, region 4 JHT21_12600 PF00140 Sigma-70 factor, region 1.2 JHT21_12600 PF04542 Sigma-70 region 2 JHT21_12600 PF04539 Sigma-70 region 3 JHT21_12605 PF01476 LysM domain JHT21_12605 PF01551 Peptidase family M23 JHT21_12615 PF01975 Survival protein SurE JHT21_12620 PF01142 tRNA pseudouridine synthase D (TruD) JHT21_12625 PF02542 YgbB family JHT21_12630 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JHT21_12635 PF04977 Septum formation initiator JHT21_12640 PF00113 Enolase, C-terminal TIM barrel domain JHT21_12640 PF03952 Enolase, N-terminal domain JHT21_12645 PF00117 Glutamine amidotransferase class-I JHT21_12645 PF06418 CTP synthase N-terminus JHT21_12650 PF03819 MazG nucleotide pyrophosphohydrolase domain JHT21_12655 PF13291 ACT domain JHT21_12655 PF04607 Region found in RelA / SpoT proteins JHT21_12655 PF02824 TGS domain JHT21_12660 PF01938 TRAM domain JHT21_12660 PF05958 tRNA (Uracil-5-)-methyltransferase JHT21_12665 PF00672 HAMP domain JHT21_12665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_12665 PF00512 His Kinase A (phospho-acceptor) domain JHT21_12665 PF01627 Hpt domain JHT21_12665 PF00072 Response regulator receiver domain JHT21_12665 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JHT21_12670 PF01648 4'-phosphopantetheinyl transferase superfamily JHT21_12675 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ JHT21_12680 PF02565 Recombination protein O C terminal JHT21_12680 PF11967 Recombination protein O N terminal JHT21_12685 PF07650 KH domain JHT21_12685 PF01926 50S ribosome-binding GTPase JHT21_12690 PF00035 Double-stranded RNA binding motif JHT21_12690 PF14622 Ribonuclease-III-like JHT21_12695 PF10502 Signal peptidase, peptidase S26 JHT21_12700 PF00679 Elongation factor G C-terminus JHT21_12700 PF00009 Elongation factor Tu GTP binding domain JHT21_12700 PF03144 Elongation factor Tu domain 2 JHT21_12700 PF06421 GTP-binding protein LepA C-terminus JHT21_12710 PF03888 MucB/RseB N-terminal domain JHT21_12710 PF17188 MucB/RseB C-terminal domain JHT21_12715 PF03872 Anti sigma-E protein RseA, N-terminal domain JHT21_12715 PF03873 Anti sigma-E protein RseA, C-terminal domain JHT21_12720 PF04542 Sigma-70 region 2 JHT21_12720 PF08281 Sigma-70, region 4 JHT21_12725 PF00890 FAD binding domain JHT21_12725 PF02910 Fumarate reductase flavoprotein C-term JHT21_12730 PF03937 Flavinator of succinate dehydrogenase JHT21_12735 PF01571 Aminomethyltransferase folate-binding domain JHT21_12750 PF01494 FAD binding domain JHT21_12755 PF01494 FAD binding domain JHT21_12760 PF03695 Uncharacterised protein family (UPF0149) JHT21_12765 PF05164 Cell division protein ZapA JHT21_12775 PF01812 5-formyltetrahydrofolate cyclo-ligase family JHT21_12780 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JHT21_12785 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JHT21_12785 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JHT21_12785 PF01842 ACT domain JHT21_12790 PF04402 Protein of unknown function (DUF541) JHT21_12795 PF03466 LysR substrate binding domain JHT21_12795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_12800 PF01810 LysE type translocator JHT21_12805 PF04073 Aminoacyl-tRNA editing domain JHT21_12810 PF00924 Mechanosensitive ion channel JHT21_12810 PF05552 Conserved TM helix JHT21_12815 PF01116 Fructose-bisphosphate aldolase class-II JHT21_12820 PF00162 Phosphoglycerate kinase JHT21_12825 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JHT21_12825 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JHT21_12830 PF07715 TonB-dependent Receptor Plug Domain JHT21_12830 PF00593 TonB dependent receptor JHT21_12835 PF03466 LysR substrate binding domain JHT21_12835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_12840 PF00456 Transketolase, thiamine diphosphate binding domain JHT21_12840 PF02780 Transketolase, C-terminal domain JHT21_12840 PF02779 Transketolase, pyrimidine binding domain JHT21_12845 PF00438 S-adenosylmethionine synthetase, N-terminal domain JHT21_12845 PF02772 S-adenosylmethionine synthetase, central domain JHT21_12845 PF02773 S-adenosylmethionine synthetase, C-terminal domain JHT21_12855 PF17283 SprT-like zinc ribbon domain JHT21_12855 PF10263 SprT-like family JHT21_12860 PF04231 Endonuclease I JHT21_12865 PF04452 RNA methyltransferase JHT21_12870 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain JHT21_12870 PF02951 Prokaryotic glutathione synthetase, N-terminal domain JHT21_12875 PF02622 Uncharacterized ACR, COG1678 JHT21_12880 PF03652 Holliday junction resolvase JHT21_12885 PF00437 Type II/IV secretion system protein JHT21_12890 PF00437 Type II/IV secretion system protein JHT21_12895 PF01168 Alanine racemase, N-terminal domain JHT21_12900 PF03807 NADP oxidoreductase coenzyme F420-dependent JHT21_12900 PF14748 Pyrroline-5-carboxylate reductase dimerisation JHT21_12905 PF02325 YGGT family JHT21_12910 PF02594 Uncharacterised ACR, YggU family COG1872 JHT21_12920 PF01725 Ham1 family JHT21_12925 PF06969 HemN C-terminal domain JHT21_12925 PF04055 Radical SAM superfamily JHT21_12930 PF04960 Glutaminase JHT21_12935 PF02086 D12 class N6 adenine-specific DNA methyltransferase JHT21_12940 PF02390 Putative methyltransferase JHT21_12945 PF14815 NUDIX domain JHT21_12945 PF00730 HhH-GPD superfamily base excision DNA repair protein JHT21_12945 PF00633 Helix-hairpin-helix motif JHT21_12950 PF04362 Bacterial Fe(2+) trafficking JHT21_12955 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain JHT21_12955 PF01464 Transglycosylase SLT domain JHT21_12995 PF17200 Single Cache domain 2 JHT21_12995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT21_12995 PF00672 HAMP domain JHT21_13025 PF00171 Aldehyde dehydrogenase family JHT21_13070 PF01507 Phosphoadenosine phosphosulfate reductase family JHT21_13075 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JHT21_13075 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JHT21_13080 PF00175 Oxidoreductase NAD-binding domain JHT21_13080 PF00258 Flavodoxin JHT21_13080 PF00667 FAD binding domain JHT21_13100 PF01207 Dihydrouridine synthase (Dus) JHT21_13105 PF01475 Ferric uptake regulator family JHT21_13115 PF00342 Phosphoglucose isomerase JHT21_13120 PF01894 Uncharacterised protein family UPF0047 JHT21_13130 PF00842 Alanine racemase, C-terminal domain JHT21_13130 PF01168 Alanine racemase, N-terminal domain JHT21_13135 PF00772 DnaB-like helicase N terminal domain JHT21_13135 PF03796 DnaB-like helicase C terminal domain JHT21_13145 PF03948 Ribosomal protein L9, C-terminal domain JHT21_13145 PF01281 Ribosomal protein L9, N-terminal domain JHT21_13150 PF01084 Ribosomal protein S18 JHT21_13155 PF00436 Single-strand binding protein family JHT21_13160 PF01250 Ribosomal protein S6 JHT21_13165 PF00834 Ribulose-phosphate 3 epimerase family JHT21_13170 PF02086 D12 class N6 adenine-specific DNA methyltransferase JHT21_13180 PF01761 3-dehydroquinate synthase JHT21_13185 PF01202 Shikimate kinase JHT21_13190 PF11741 AMIN domain JHT21_13190 PF00263 Bacterial type II and III secretion system protein JHT21_13190 PF03958 Bacterial type II/III secretion system short domain JHT21_13190 PF07660 Secretin and TonB N terminus short domain JHT21_13195 PF04351 Pilus assembly protein, PilP JHT21_13205 PF05137 Fimbrial assembly protein (PilN) JHT21_13215 PF00905 Penicillin binding protein transpeptidase domain JHT21_13215 PF00912 Transglycosylase JHT21_13215 PF17092 Penicillin-binding protein OB-like domain JHT21_13220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_13220 PF03466 LysR substrate binding domain JHT21_13225 PF00462 Glutaredoxin JHT21_13225 PF08534 Redoxin JHT21_13235 PF14698 Argininosuccinate lyase C-terminal JHT21_13235 PF00206 Lyase JHT21_13235 PF00583 Acetyltransferase (GNAT) family JHT21_13240 PF00764 Arginosuccinate synthase JHT21_13245 PF00696 Amino acid kinase family JHT21_13250 PF01118 Semialdehyde dehydrogenase, NAD binding domain JHT21_13250 PF02774 Semialdehyde dehydrogenase, dimerisation domain JHT21_13255 PF07687 Peptidase dimerisation domain JHT21_13255 PF01546 Peptidase family M20/M25/M40 JHT21_13260 PF00311 Phosphoenolpyruvate carboxylase JHT21_13270 PF02219 Methylenetetrahydrofolate reductase JHT21_13275 PF03447 Homoserine dehydrogenase, NAD binding domain JHT21_13275 PF00742 Homoserine dehydrogenase JHT21_13275 PF00696 Amino acid kinase family JHT21_13280 PF01053 Cys/Met metabolism PLP-dependent enzyme JHT21_13285 PF01340 Met Apo-repressor, MetJ JHT21_13290 PF00390 Malic enzyme, N-terminal domain JHT21_13290 PF03949 Malic enzyme, NAD binding domain JHT21_13295 PF00210 Ferritin-like domain JHT21_13300 PF04324 BFD-like [2Fe-2S] binding domain JHT21_13305 PF00009 Elongation factor Tu GTP binding domain JHT21_13305 PF03144 Elongation factor Tu domain 2 JHT21_13305 PF03143 Elongation factor Tu C-terminal domain JHT21_13310 PF03144 Elongation factor Tu domain 2 JHT21_13310 PF03764 Elongation factor G, domain IV JHT21_13310 PF14492 Elongation Factor G, domain II JHT21_13310 PF00009 Elongation factor Tu GTP binding domain JHT21_13310 PF00679 Elongation factor G C-terminus JHT21_13315 PF00177 Ribosomal protein S7p/S5e JHT21_13320 PF00164 Ribosomal protein S12/S23 JHT21_13325 PF04077 DsrH like protein JHT21_13330 PF02635 DsrE/DsrF-like family JHT21_13335 PF02635 DsrE/DsrF-like family JHT21_13340 PF13309 HTH domain JHT21_13340 PF08348 YheO-like PAS domain JHT21_13345 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JHT21_13345 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JHT21_13355 PF04102 SlyX JHT21_13360 PF01112 Asparaginase JHT21_13365 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JHT21_13375 PF00999 Sodium/hydrogen exchanger family JHT21_13375 PF02254 TrkA-N domain JHT21_13380 PF02525 Flavodoxin-like fold JHT21_13385 PF00005 ABC transporter JHT21_13385 PF12848 ABC transporter JHT21_13395 PF00561 alpha/beta hydrolase fold JHT21_13400 PF06794 Uncharacterised protein family (UPF0270) JHT21_13405 PF00485 Phosphoribulokinase / Uridine kinase family JHT21_13410 PF13545 Crp-like helix-turn-helix domain JHT21_13410 PF00027 Cyclic nucleotide-binding domain JHT21_13420 PF00171 Aldehyde dehydrogenase family JHT21_13425 PF04958 Arginine N-succinyltransferase beta subunit JHT21_13430 PF00202 Aminotransferase class-III JHT21_13435 PF00117 Glutamine amidotransferase class-I JHT21_13450 PF00579 tRNA synthetases class I (W and Y) JHT21_13455 PF13419 Haloacid dehalogenase-like hydrolase JHT21_13460 PF00588 SpoU rRNA Methylase family JHT21_13460 PF08032 RNA 2'-O ribose methyltransferase substrate binding JHT21_13465 PF17876 Cold shock domain JHT21_13465 PF08461 Ribonuclease R winged-helix domain JHT21_13465 PF08206 Ribonuclease B OB domain JHT21_13465 PF00773 RNB domain JHT21_13465 PF00575 S1 RNA binding domain JHT21_13470 PF02082 Transcriptional regulator JHT21_13475 PF00970 Oxidoreductase FAD-binding domain JHT21_13475 PF00042 Globin JHT21_13475 PF00175 Oxidoreductase NAD-binding domain JHT21_13480 PF08238 Sel1 repeat JHT21_13485 PF00709 Adenylosuccinate synthetase JHT21_13490 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) JHT21_13495 PF01145 SPFH domain / Band 7 family JHT21_13500 PF01145 SPFH domain / Band 7 family JHT21_13500 PF12221 Bacterial membrane protein N terminal JHT21_13505 PF01926 50S ribosome-binding GTPase JHT21_13505 PF16360 GTP-binding GTPase Middle Region JHT21_13505 PF13167 GTP-binding GTPase N-terminal JHT21_13510 PF17209 Hfq protein JHT21_13520 PF01119 DNA mismatch repair protein, C-terminal domain JHT21_13520 PF08676 MutL C terminal dimerisation domain JHT21_13525 PF01520 N-acetylmuramoyl-L-alanine amidase JHT21_13530 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JHT21_13535 PF08331 Domain of unknown function (DUF1730) JHT21_13605 PF00929 Exonuclease JHT21_13610 PF03193 RsgA GTPase JHT21_13615 PF02666 Phosphatidylserine decarboxylase JHT21_13620 PF00939 Sodium:sulfate symporter transmembrane region JHT21_13625 PF00672 HAMP domain JHT21_13625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT21_13635 PF06415 BPG-independent PGAM N-terminus (iPGM_N) JHT21_13635 PF01676 Metalloenzyme superfamily JHT21_13640 PF00581 Rhodanese-like domain JHT21_13645 PF02556 Preprotein translocase subunit SecB JHT21_13650 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JHT21_13650 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JHT21_13655 PF00132 Bacterial transferase hexapeptide (six repeats) JHT21_13655 PF06426 Serine acetyltransferase, N-terminal JHT21_13660 PF01551 Peptidase family M23 JHT21_13670 PF08360 QacR-like protein, C-terminal region JHT21_13670 PF00440 Bacterial regulatory proteins, tetR family JHT21_13680 PF00152 tRNA synthetases class II (D, K and N) JHT21_13685 PF00890 FAD binding domain JHT21_13685 PF02910 Fumarate reductase flavoprotein C-term JHT21_13690 PF13085 2Fe-2S iron-sulfur cluster binding domain JHT21_13690 PF13183 4Fe-4S dicluster domain JHT21_13695 PF02300 Fumarate reductase subunit C JHT21_13700 PF02313 Fumarate reductase subunit D JHT21_13710 PF08207 Elongation factor P (EF-P) KOW-like domain JHT21_13710 PF01132 Elongation factor P (EF-P) OB domain JHT21_13710 PF09285 Elongation factor P, C-terminal JHT21_13715 PF04055 Radical SAM superfamily JHT21_13720 PF01168 Alanine racemase, N-terminal domain JHT21_13720 PF00842 Alanine racemase, C-terminal domain JHT21_13725 PF02308 MgtC family JHT21_13735 PF00118 TCP-1/cpn60 chaperonin family JHT21_13740 PF00166 Chaperonin 10 Kd subunit JHT21_13745 PF01554 MatE JHT21_13750 PF00365 Phosphofructokinase JHT21_13755 PF16916 Dimerisation domain of Zinc Transporter JHT21_13755 PF01545 Cation efflux family JHT21_13760 PF07813 LTXXQ motif family protein JHT21_13765 PF00486 Transcriptional regulatory protein, C terminal JHT21_13765 PF00072 Response regulator receiver domain JHT21_13770 PF00672 HAMP domain JHT21_13770 PF16527 Two-component sensor protein CpxA, periplasmic domain JHT21_13770 PF00512 His Kinase A (phospho-acceptor) domain JHT21_13770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_13775 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JHT21_13775 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JHT21_13780 PF00588 SpoU rRNA Methylase family JHT21_13785 PF04186 FxsA cytoplasmic membrane protein JHT21_13790 PF10415 Fumarase C C-terminus JHT21_13790 PF00206 Lyase JHT21_13795 PF03605 Anaerobic c4-dicarboxylate membrane transporter JHT21_13800 PF11412 Disulphide bond corrector protein DsbC JHT21_13800 PF02683 Cytochrome C biogenesis protein transmembrane region JHT21_13805 PF00196 Bacterial regulatory proteins, luxR family JHT21_13805 PF00072 Response regulator receiver domain JHT21_13810 PF03471 Transporter associated domain JHT21_13810 PF00999 Sodium/hydrogen exchanger family JHT21_13810 PF02080 TrkA-C domain JHT21_13820 PF00474 Sodium:solute symporter family JHT21_13835 PF10415 Fumarase C C-terminus JHT21_13835 PF00206 Lyase JHT21_13840 PF00072 Response regulator receiver domain JHT21_13840 PF00512 His Kinase A (phospho-acceptor) domain JHT21_13840 PF00672 HAMP domain JHT21_13840 PF01627 Hpt domain JHT21_13840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_13845 PF12832 MFS_1 like family JHT21_13860 PF13193 AMP-binding enzyme C-terminal domain JHT21_13860 PF16177 Acetyl-coenzyme A synthetase N-terminus JHT21_13860 PF00501 AMP-binding enzyme JHT21_13865 PF01220 Dehydroquinase class II JHT21_13870 PF00364 Biotin-requiring enzyme JHT21_13875 PF00289 Biotin carboxylase, N-terminal domain JHT21_13875 PF02785 Biotin carboxylase C-terminal domain JHT21_13875 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JHT21_13885 PF01207 Dihydrouridine synthase (Dus) JHT21_13890 PF02954 Bacterial regulatory protein, Fis family JHT21_13895 PF07690 Major Facilitator Superfamily JHT21_13900 PF12848 ABC transporter JHT21_13900 PF00005 ABC transporter JHT21_13905 PF05230 MASE2 domain JHT21_13905 PF00990 Diguanylate cyclase, GGDEF domain JHT21_13915 PF13358 DDE superfamily endonuclease JHT21_13945 PF00072 Response regulator receiver domain JHT21_13950 PF00356 Bacterial regulatory proteins, lacI family JHT21_13950 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JHT21_13955 PF04794 YdjC-like protein JHT21_13960 PF02056 Family 4 glycosyl hydrolase JHT21_13960 PF11975 Family 4 glycosyl hydrolase C-terminal domain JHT21_13965 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JHT21_13970 PF02378 Phosphotransferase system, EIIC JHT21_13975 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JHT21_13980 PF01522 Polysaccharide deacetylase JHT21_13985 PF02384 N-6 DNA Methylase JHT21_13985 PF12161 HsdM N-terminal domain JHT21_13995 PF08463 EcoEI R protein C-terminal JHT21_13995 PF04851 Type III restriction enzyme, res subunit JHT21_13995 PF00271 Helicase conserved C-terminal domain JHT21_13995 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) JHT21_14080 PF00106 short chain dehydrogenase JHT21_14085 PF10011 Predicted membrane protein (DUF2254) JHT21_14095 PF03739 Lipopolysaccharide export system permease LptF/LptG JHT21_14100 PF03739 Lipopolysaccharide export system permease LptF/LptG JHT21_14105 PF02789 Cytosol aminopeptidase family, N-terminal domain JHT21_14105 PF00883 Cytosol aminopeptidase family, catalytic domain JHT21_14110 PF04364 DNA polymerase III chi subunit, HolC JHT21_14115 PF08264 Anticodon-binding domain of tRNA JHT21_14115 PF10458 Valyl tRNA synthetase tRNA binding arm JHT21_14115 PF00133 tRNA synthetases class I (I, L, M and V) JHT21_14125 PF00583 Acetyltransferase (GNAT) family JHT21_14135 PF06877 Regulator of ribonuclease activity B JHT21_14145 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JHT21_14145 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JHT21_14155 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JHT21_14155 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JHT21_14160 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain JHT21_14160 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain JHT21_14165 PF01042 Endoribonuclease L-PSP JHT21_14170 PF01553 Acyltransferase JHT21_14175 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JHT21_14180 PF01722 BolA-like protein JHT21_14190 PF05494 MlaC protein JHT21_14195 PF02470 MlaD protein JHT21_14200 PF02405 Permease MlaE JHT21_14205 PF00005 ABC transporter JHT21_14210 PF01699 Sodium/calcium exchanger protein JHT21_14215 PF00571 CBS domain JHT21_14215 PF01380 SIS domain JHT21_14225 PF03968 OstA-like protein JHT21_14230 PF00005 ABC transporter JHT21_14230 PF12399 Branched-chain amino acid ATP-binding cassette transporter JHT21_14235 PF04552 Sigma-54, DNA binding domain JHT21_14235 PF00309 Sigma-54 factor, Activator interacting domain (AID) JHT21_14235 PF04963 Sigma-54 factor, core binding domain JHT21_14240 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JHT21_14245 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JHT21_14250 PF03668 P-loop ATPase protein family JHT21_14255 PF00381 PTS HPr component phosphorylation site JHT21_14260 PF00571 CBS domain JHT21_14260 PF01769 Divalent cation transporter JHT21_14260 PF03448 MgtE intracellular N domain JHT21_14265 PF01523 Putative modulator of DNA gyrase JHT21_14270 PF04751 Protein of unknown function (DUF615) JHT21_14275 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JHT21_14275 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JHT21_14280 PF00849 RNA pseudouridylate synthase JHT21_14290 PF00271 Helicase conserved C-terminal domain JHT21_14290 PF12137 RNA polymerase recycling family C-terminal JHT21_14290 PF00176 SNF2 family N-terminal domain JHT21_14290 PF18337 RapA N-terminal Tudor like domain JHT21_14290 PF18339 RapA N-terminal Tudor like domain 1 JHT21_14295 PF02562 PhoH-like protein JHT21_14295 PF13638 PIN domain JHT21_14300 PF01523 Putative modulator of DNA gyrase JHT21_14305 PF00795 Carbon-nitrogen hydrolase JHT21_14310 PF13116 Protein of unknown function JHT21_14310 PF13502 AsmA-like C-terminal region JHT21_14315 PF00575 S1 RNA binding domain JHT21_14315 PF10150 Ribonuclease E/G family JHT21_14320 PF02545 Maf-like protein JHT21_14325 PF04093 rod shape-determining protein MreD JHT21_14330 PF04085 rod shape-determining protein MreC JHT21_14370 PF07963 Prokaryotic N-terminal methylation motif JHT21_14370 PF00114 Pilin (bacterial filament) JHT21_14380 PF00482 Type II secretion system (T2SS), protein F JHT21_14385 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JHT21_14385 PF00437 Type II/IV secretion system protein JHT21_14395 PF13401 AAA domain JHT21_14395 PF01471 Putative peptidoglycan binding domain JHT21_14400 PF03958 Bacterial type II/III secretion system short domain JHT21_14400 PF07660 Secretin and TonB N terminus short domain JHT21_14400 PF11741 AMIN domain JHT21_14400 PF00263 Bacterial type II and III secretion system protein JHT21_14420 PF00563 EAL domain JHT21_14420 PF17157 Gammaproteobacterial periplasmic sensor domain JHT21_14420 PF00990 Diguanylate cyclase, GGDEF domain JHT21_14425 PF00436 Single-strand binding protein family JHT21_14430 PF00196 Bacterial regulatory proteins, luxR family JHT21_14435 PF00483 Nucleotidyl transferase JHT21_14440 PF17760 UvrA interaction domain JHT21_14440 PF17755 UvrA DNA-binding domain JHT21_14440 PF00005 ABC transporter JHT21_14450 PF00266 Aminotransferase class-V JHT21_14455 PF00696 Amino acid kinase family JHT21_14455 PF01842 ACT domain JHT21_14460 PF02574 Homocysteine S-methyltransferase JHT21_14460 PF02310 B12 binding domain JHT21_14460 PF02607 B12 binding domain JHT21_14460 PF02965 Vitamin B12 dependent methionine synthase, activation domain JHT21_14460 PF00809 Pterin binding enzyme JHT21_14465 PF00999 Sodium/hydrogen exchanger family JHT21_14475 PF13358 DDE superfamily endonuclease JHT21_14530 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain JHT21_14530 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JHT21_14530 PF01276 Orn/Lys/Arg decarboxylase, major domain JHT21_14535 PF13520 Amino acid permease JHT21_14545 PF18500 CadC C-terminal domain 1 JHT21_14545 PF00486 Transcriptional regulatory protein, C terminal JHT21_14550 PF13411 MerR HTH family regulatory protein JHT21_14555 PF01808 AICARFT/IMPCHase bienzyme JHT21_14555 PF02142 MGS-like domain JHT21_14560 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JHT21_14560 PF02843 Phosphoribosylglycinamide synthetase, C domain JHT21_14560 PF02844 Phosphoribosylglycinamide synthetase, N domain JHT21_14570 PF00216 Bacterial DNA-binding protein JHT21_14575 PF00571 CBS domain JHT21_14575 PF01595 Cyclin M transmembrane N-terminal domain JHT21_14580 PF04222 Protein of unknown function (DUF416) JHT21_14585 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JHT21_14590 PF03167 Uracil DNA glycosylase superfamily JHT21_14595 PF01208 Uroporphyrinogen decarboxylase (URO-D) JHT21_14610 PF00293 NUDIX domain JHT21_14610 PF09297 NADH pyrophosphatase zinc ribbon domain JHT21_14615 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ JHT21_14620 PF00623 RNA polymerase Rpb1, domain 2 JHT21_14620 PF04998 RNA polymerase Rpb1, domain 5 JHT21_14620 PF05000 RNA polymerase Rpb1, domain 4 JHT21_14620 PF04997 RNA polymerase Rpb1, domain 1 JHT21_14620 PF04983 RNA polymerase Rpb1, domain 3 JHT21_14625 PF04560 RNA polymerase Rpb2, domain 7 JHT21_14625 PF10385 RNA polymerase beta subunit external 1 domain JHT21_14625 PF04563 RNA polymerase beta subunit JHT21_14625 PF04561 RNA polymerase Rpb2, domain 2 JHT21_14625 PF04565 RNA polymerase Rpb2, domain 3 JHT21_14625 PF00562 RNA polymerase Rpb2, domain 6 JHT21_14630 PF16320 Ribosomal protein L7/L12 dimerisation domain JHT21_14630 PF00542 Ribosomal protein L7/L12 C-terminal domain JHT21_14635 PF00466 Ribosomal protein L10 JHT21_14640 PF00687 Ribosomal protein L1p/L10e family JHT21_14645 PF00298 Ribosomal protein L11, RNA binding domain JHT21_14645 PF03946 Ribosomal protein L11, N-terminal domain JHT21_14650 PF02357 Transcription termination factor nusG JHT21_14650 PF00467 KOW motif JHT21_14655 PF00584 SecE/Sec61-gamma subunits of protein translocation complex JHT21_14660 PF03144 Elongation factor Tu domain 2 JHT21_14660 PF03143 Elongation factor Tu C-terminal domain JHT21_14660 PF00009 Elongation factor Tu GTP binding domain JHT21_14685 PF00485 Phosphoribulokinase / Uridine kinase family JHT21_14690 PF02237 Biotin protein ligase C terminal domain JHT21_14690 PF03099 Biotin/lipoate A/B protein ligase family JHT21_14690 PF08279 HTH domain JHT21_14695 PF01565 FAD binding domain JHT21_14695 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JHT21_14705 PF13091 PLD-like domain JHT21_14735 PF01177 Asp/Glu/Hydantoin racemase JHT21_14745 PF07715 TonB-dependent Receptor Plug Domain JHT21_14745 PF00593 TonB dependent receptor JHT21_14750 PF05958 tRNA (Uracil-5-)-methyltransferase JHT21_14760 PF00440 Bacterial regulatory proteins, tetR family JHT21_14765 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHT21_14765 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JHT21_14770 PF01554 MatE JHT21_14775 PF04072 Leucine carboxyl methyltransferase JHT21_14780 PF01726 LexA DNA binding domain JHT21_14780 PF00717 Peptidase S24-like JHT21_14785 PF01553 Acyltransferase JHT21_14790 PF01040 UbiA prenyltransferase family JHT21_14795 PF04345 Chorismate lyase JHT21_14800 PF03748 Flagellar basal body-associated protein FliL JHT21_14805 PF01694 Rhomboid family JHT21_14805 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease JHT21_14810 PF00581 Rhodanese-like domain JHT21_14815 PF00140 Sigma-70 factor, region 1.2 JHT21_14815 PF04542 Sigma-70 region 2 JHT21_14815 PF04545 Sigma-70, region 4 JHT21_14820 PF18075 FtsX extracellular domain JHT21_14825 PF00005 ABC transporter JHT21_14830 PF00448 SRP54-type protein, GTPase domain JHT21_14830 PF02881 SRP54-type protein, helical bundle domain JHT21_14845 PF01914 MarC family integral membrane protein JHT21_14895 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JHT21_14895 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JHT21_14900 PF01022 Bacterial regulatory protein, arsR family JHT21_14905 PF08668 HDOD domain JHT21_14905 PF00563 EAL domain JHT21_14910 PF01810 LysE type translocator JHT21_14915 PF12146 Serine aminopeptidase, S33 JHT21_14935 PF03942 DTW domain JHT21_14940 PF00563 EAL domain JHT21_14940 PF00990 Diguanylate cyclase, GGDEF domain JHT21_14940 PF10442 FIST C domain JHT21_14940 PF08495 FIST N domain JHT21_14945 PF13419 Haloacid dehalogenase-like hydrolase JHT21_14950 PF00589 Phage integrase family JHT21_14950 PF02899 Phage integrase, N-terminal SAM-like domain JHT21_14960 PF01678 Diaminopimelate epimerase JHT21_14965 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JHT21_14965 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JHT21_14975 PF01491 Frataxin-like domain JHT21_14980 PF01295 Adenylate cyclase, class-I JHT21_14980 PF12633 Adenylate cyclase NT domain JHT21_14985 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JHT21_14985 PF03900 Porphobilinogen deaminase, C-terminal domain JHT21_14990 PF02602 Uroporphyrinogen-III synthase HemD JHT21_14995 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase JHT21_15000 PF07219 HemY protein N-terminus JHT21_15065 PF00175 Oxidoreductase NAD-binding domain JHT21_15070 PF00111 2Fe-2S iron-sulfur cluster binding domain JHT21_15075 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase JHT21_15085 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JHT21_15085 PF07498 Rho termination factor, N-terminal domain JHT21_15085 PF07497 Rho termination factor, RNA-binding domain JHT21_15090 PF00085 Thioredoxin JHT21_15095 PF00271 Helicase conserved C-terminal domain JHT21_15095 PF00270 DEAD/DEAH box helicase JHT21_15100 PF02541 Ppx/GppA phosphatase family JHT21_15105 PF02592 Putative vitamin uptake transporter JHT21_15115 PF00270 DEAD/DEAH box helicase JHT21_15115 PF00570 HRDC domain JHT21_15115 PF00271 Helicase conserved C-terminal domain JHT21_15115 PF09382 RQC domain JHT21_15115 PF16124 RecQ zinc-binding JHT21_15120 PF00892 EamA-like transporter family JHT21_15130 PF01810 LysE type translocator JHT21_15140 PF00580 UvrD/REP helicase N-terminal domain JHT21_15140 PF13361 UvrD-like helicase C-terminal domain JHT21_15150 PF05114 Protein of unknown function (DUF692) JHT21_15170 PF07690 Major Facilitator Superfamily JHT21_15175 PF03466 LysR substrate binding domain JHT21_15175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_15180 PF00557 Metallopeptidase family M24 JHT21_15180 PF01321 Creatinase/Prolidase N-terminal domain JHT21_15180 PF00557 Metallopeptidase family M24 JHT21_15180 PF01321 Creatinase/Prolidase N-terminal domain JHT21_15185 PF06968 Biotin and Thiamin Synthesis associated domain JHT21_15185 PF04055 Radical SAM superfamily JHT21_15190 PF05690 Thiazole biosynthesis protein ThiG JHT21_15195 PF02597 ThiS family JHT21_15200 PF00899 ThiF family JHT21_15205 PF02581 Thiamine monophosphate synthase JHT21_15210 PF13667 ThiC-associated domain JHT21_15210 PF01964 Radical SAM ThiC family JHT21_15215 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JHT21_15230 PF13358 DDE superfamily endonuclease JHT21_15270 PF00132 Bacterial transferase hexapeptide (six repeats) JHT21_15275 PF07369 Protein of unknown function (DUF1488) JHT21_15280 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JHT21_15280 PF08501 Shikimate dehydrogenase substrate binding domain JHT21_15280 PF01488 Shikimate / quinate 5-dehydrogenase JHT21_15285 PF01218 Coproporphyrinogen III oxidase JHT21_15290 PF01300 Telomere recombination JHT21_15295 PF00731 AIR carboxylase JHT21_15300 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JHT21_15300 PF02222 ATP-grasp domain JHT21_15305 PF01396 Topoisomerase DNA binding C4 zinc finger JHT21_15310 PF04361 Protein of unknown function (DUF494) JHT21_15315 PF17782 DprA winged helix domain JHT21_15315 PF02481 DNA recombination-mediator protein A JHT21_15325 PF01327 Polypeptide deformylase JHT21_15330 PF02911 Formyl transferase, C-terminal domain JHT21_15330 PF00551 Formyl transferase JHT21_15335 PF01029 NusB family JHT21_15335 PF01189 16S rRNA methyltransferase RsmB/F JHT21_15340 PF02254 TrkA-N domain JHT21_15340 PF02080 TrkA-C domain JHT21_15345 PF02386 Cation transport protein JHT21_15355 PF03006 Haemolysin-III related JHT21_15360 PF07070 SpoOM protein JHT21_15365 PF06288 Protein of unknown function (DUF1040) JHT21_15370 PF13746 4Fe-4S dicluster domain JHT21_15370 PF12801 4Fe-4S binding domain JHT21_15370 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase JHT21_15375 PF01636 Phosphotransferase enzyme family JHT21_15380 PF01323 DSBA-like thioredoxin domain JHT21_15385 PF01553 Acyltransferase JHT21_15395 PF13335 Magnesium chelatase, subunit ChlI C-terminal JHT21_15395 PF01078 Magnesium chelatase, subunit ChlI JHT21_15410 PF01063 Amino-transferase class IV JHT21_15415 PF00920 Dehydratase family JHT21_15420 PF00291 Pyridoxal-phosphate dependent enzyme JHT21_15420 PF00585 C-terminal regulatory domain of Threonine dehydratase JHT21_15425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_15425 PF03466 LysR substrate binding domain JHT21_15430 PF07690 Major Facilitator Superfamily JHT21_15435 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHT21_15440 PF00528 Binding-protein-dependent transport system inner membrane component JHT21_15445 PF00132 Bacterial transferase hexapeptide (six repeats) JHT21_15445 PF12804 MobA-like NTP transferase domain JHT21_15450 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain JHT21_15450 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JHT21_15455 PF02874 ATP synthase alpha/beta family, beta-barrel domain JHT21_15455 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JHT21_15460 PF00231 ATP synthase JHT21_15465 PF00306 ATP synthase alpha/beta chain, C terminal domain JHT21_15465 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JHT21_15465 PF02874 ATP synthase alpha/beta family, beta-barrel domain JHT21_15470 PF00213 ATP synthase delta (OSCP) subunit JHT21_15475 PF00430 ATP synthase B/B' CF(0) JHT21_15480 PF00137 ATP synthase subunit C JHT21_15485 PF00119 ATP synthase A chain JHT21_15490 PF03899 ATP synthase I chain JHT21_15495 PF02195 ParB-like nuclease domain JHT21_15495 PF17762 HTH domain found in ParB protein JHT21_15500 PF13614 AAA domain JHT21_15505 PF02527 rRNA small subunit methyltransferase G JHT21_15510 PF13932 GidA associated domain JHT21_15510 PF01134 Glucose inhibited division protein A JHT21_15515 PF00258 Flavodoxin JHT21_15520 PF12631 MnmE helical domain JHT21_15520 PF01926 50S ribosome-binding GTPase JHT21_15520 PF10396 GTP-binding protein TrmE N-terminus JHT21_15525 PF02096 60Kd inner membrane protein JHT21_15525 PF14849 YidC periplasmic domain JHT21_15530 PF01809 Putative membrane protein insertion efficiency factor JHT21_15535 PF00825 Ribonuclease P JHT21_15540 PF00468 Ribosomal protein L34 JHT21_15545 PF00005 ABC transporter JHT21_15550 PF00528 Binding-protein-dependent transport system inner membrane component JHT21_15555 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHT21_15570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_15570 PF03466 LysR substrate binding domain JHT21_15575 PF13186 Iron-sulfur cluster-binding domain JHT21_15575 PF04055 Radical SAM superfamily JHT21_15580 PF00884 Sulfatase JHT21_15585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_15585 PF03466 LysR substrate binding domain JHT21_15595 PF12729 Four helix bundle sensory module for signal transduction JHT21_15595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT21_15595 PF00672 HAMP domain JHT21_15600 PF00005 ABC transporter JHT21_15605 PF12792 CSS motif domain associated with EAL JHT21_15605 PF00563 EAL domain JHT21_15625 PF00271 Helicase conserved C-terminal domain JHT21_15625 PF00270 DEAD/DEAH box helicase JHT21_15630 PF02492 CobW/HypB/UreG, nucleotide-binding domain JHT21_15630 PF07683 Cobalamin synthesis protein cobW C-terminal domain JHT21_15640 PF01470 Pyroglutamyl peptidase JHT21_15650 PF00291 Pyridoxal-phosphate dependent enzyme JHT21_15655 PF09905 DNA-binding protein VF530 JHT21_15660 PF00270 DEAD/DEAH box helicase JHT21_15660 PF00271 Helicase conserved C-terminal domain JHT21_15665 PF12843 Putative quorum-sensing-regulated virulence factor JHT21_15685 PF01329 Pterin 4 alpha carbinolamine dehydratase JHT21_15690 PF00351 Biopterin-dependent aromatic amino acid hydroxylase JHT21_15695 PF00501 AMP-binding enzyme JHT21_15695 PF13193 AMP-binding enzyme C-terminal domain JHT21_15705 PF03466 LysR substrate binding domain JHT21_15705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_15730 PF00892 EamA-like transporter family JHT21_15745 PF00465 Iron-containing alcohol dehydrogenase JHT21_15750 PF07995 Glucose / Sorbosone dehydrogenase JHT21_15760 PF00210 Ferritin-like domain JHT21_15765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT21_15765 PF00672 HAMP domain JHT21_15765 PF17200 Single Cache domain 2 JHT21_15775 PF02687 FtsX-like permease family JHT21_15775 PF12704 MacB-like periplasmic core domain JHT21_15775 PF00005 ABC transporter JHT21_15780 PF00005 ABC transporter JHT21_15780 PF02687 FtsX-like permease family JHT21_15780 PF12704 MacB-like periplasmic core domain JHT21_15795 PF00990 Diguanylate cyclase, GGDEF domain JHT21_15800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT21_15800 PF08447 PAS fold JHT21_15800 PF13426 PAS domain JHT21_15805 PF03889 Alternative ribosome-rescue factor A JHT21_15810 PF00313 'Cold-shock' DNA-binding domain JHT21_15840 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JHT21_15840 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JHT21_15845 PF01040 UbiA prenyltransferase family JHT21_15850 PF02628 Cytochrome oxidase assembly protein JHT21_15870 PF00510 Cytochrome c oxidase subunit III JHT21_15875 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 JHT21_15880 PF00115 Cytochrome C and Quinol oxidase polypeptide I JHT21_15885 PF02790 Cytochrome C oxidase subunit II, transmembrane domain JHT21_15885 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JHT21_15890 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JHT21_15890 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JHT21_15890 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JHT21_15890 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JHT21_15900 PF01810 LysE type translocator JHT21_15920 PF01557 Fumarylacetoacetate (FAA) hydrolase family JHT21_15930 PF00267 Gram-negative porin JHT21_15935 PF00892 EamA-like transporter family JHT21_15940 PF00462 Glutaredoxin JHT21_15950 PF07690 Major Facilitator Superfamily JHT21_15955 PF03466 LysR substrate binding domain JHT21_15955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_15960 PF00563 EAL domain JHT21_15960 PF00990 Diguanylate cyclase, GGDEF domain JHT21_15960 PF08448 PAS fold JHT21_15960 PF08447 PAS fold JHT21_15965 PF01476 LysM domain JHT21_15965 PF08525 Opacity-associated protein A N-terminal motif JHT21_15965 PF01551 Peptidase family M23 JHT21_15985 PF07670 Nucleoside recognition JHT21_15990 PF00672 HAMP domain JHT21_15990 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT21_15990 PF02743 Cache domain JHT21_16000 PF03222 Tryptophan/tyrosine permease family JHT21_16035 PF00107 Zinc-binding dehydrogenase JHT21_16035 PF08240 Alcohol dehydrogenase GroES-like domain JHT21_16040 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JHT21_16040 PF02378 Phosphotransferase system, EIIC JHT21_16045 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JHT21_16060 PF01758 Sodium Bile acid symporter family JHT21_16070 PF01161 Phosphatidylethanolamine-binding protein JHT21_16075 PF02567 Phenazine biosynthesis-like protein JHT21_16080 PF10282 Lactonase, 7-bladed beta-propeller JHT21_16085 PF00672 HAMP domain JHT21_16085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT21_16095 PF00005 ABC transporter JHT21_16115 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JHT21_16115 PF00384 Molybdopterin oxidoreductase JHT21_16115 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JHT21_16115 PF12838 4Fe-4S dicluster domain JHT21_16115 PF01568 Molydopterin dinucleotide binding domain JHT21_16135 PF00873 AcrB/AcrD/AcrF family JHT21_16155 PF00990 Diguanylate cyclase, GGDEF domain JHT21_16165 PF13302 Acetyltransferase (GNAT) domain JHT21_16175 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) JHT21_16180 PF00873 AcrB/AcrD/AcrF family JHT21_16185 PF13533 Biotin-lipoyl like JHT21_16195 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain JHT21_16195 PF00326 Prolyl oligopeptidase family JHT21_16200 PF00005 ABC transporter JHT21_16200 PF16326 ABC transporter C-terminal domain JHT21_16200 PF12848 ABC transporter JHT21_16205 PF00582 Universal stress protein family JHT21_16210 PF02525 Flavodoxin-like fold JHT21_16215 PF02254 TrkA-N domain JHT21_16215 PF00999 Sodium/hydrogen exchanger family JHT21_16230 PF00128 Alpha amylase, catalytic domain JHT21_16240 PF01752 Collagenase JHT21_16240 PF04151 Bacterial pre-peptidase C-terminal domain JHT21_16240 PF08453 Peptidase family M9 N-terminal JHT21_16255 PF03466 LysR substrate binding domain JHT21_16255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_16260 PF00210 Ferritin-like domain JHT21_16265 PF00141 Peroxidase JHT21_16285 PF00082 Subtilase family JHT21_16290 PF13087 AAA domain JHT21_16290 PF13091 PLD-like domain JHT21_16305 PF00072 Response regulator receiver domain JHT21_16305 PF01584 CheW-like domain JHT21_16315 PF01243 Pyridoxamine 5'-phosphate oxidase JHT21_16320 PF06228 Haem utilisation ChuX/HutX JHT21_16325 PF04055 Radical SAM superfamily JHT21_16330 PF03544 Gram-negative bacterial TonB protein C-terminal JHT21_16335 PF01618 MotA/TolQ/ExbB proton channel family JHT21_16340 PF02472 Biopolymer transport protein ExbD/TolR JHT21_16350 PF01032 FecCD transport family JHT21_16355 PF00005 ABC transporter JHT21_16395 PF01467 Cytidylyltransferase-like JHT21_16400 PF02540 NAD synthase JHT21_16405 PF00111 2Fe-2S iron-sulfur cluster binding domain JHT21_16405 PF03473 MOSC domain JHT21_16405 PF00111 2Fe-2S iron-sulfur cluster binding domain JHT21_16405 PF03476 MOSC N-terminal beta barrel domain JHT21_16405 PF03476 MOSC N-terminal beta barrel domain JHT21_16405 PF03473 MOSC domain JHT21_16410 PF01679 Proteolipid membrane potential modulator JHT21_16415 PF01979 Amidohydrolase family JHT21_16420 PF05661 Protein of unknown function (DUF808) JHT21_16450 PF01497 Periplasmic binding protein JHT21_16450 PF12833 Helix-turn-helix domain JHT21_16455 PF00155 Aminotransferase class I and II JHT21_16480 PF00535 Glycosyl transferase family 2 JHT21_16495 PF00271 Helicase conserved C-terminal domain JHT21_16495 PF00270 DEAD/DEAH box helicase JHT21_16505 PF03466 LysR substrate binding domain JHT21_16505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_16510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_16510 PF03466 LysR substrate binding domain JHT21_16520 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JHT21_16525 PF08240 Alcohol dehydrogenase GroES-like domain JHT21_16525 PF00107 Zinc-binding dehydrogenase JHT21_16540 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JHT21_16540 PF12833 Helix-turn-helix domain JHT21_16545 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) JHT21_16565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_16565 PF03466 LysR substrate binding domain JHT21_16570 PF00709 Adenylosuccinate synthetase JHT21_16575 PF00710 Asparaginase, N-terminal JHT21_16575 PF17763 Glutaminase/Asparaginase C-terminal domain JHT21_16580 PF03618 Kinase/pyrophosphorylase JHT21_16585 PF00391 PEP-utilising enzyme, mobile domain JHT21_16585 PF02896 PEP-utilising enzyme, TIM barrel domain JHT21_16585 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JHT21_16600 PF00579 tRNA synthetases class I (W and Y) JHT21_16605 PF13416 Bacterial extracellular solute-binding protein JHT21_16615 PF03466 LysR substrate binding domain JHT21_16615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_16620 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JHT21_16625 PF00873 AcrB/AcrD/AcrF family JHT21_16640 PF07694 5TMR of 5TMR-LYT JHT21_16640 PF00990 Diguanylate cyclase, GGDEF domain JHT21_16650 PF00196 Bacterial regulatory proteins, luxR family JHT21_16655 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 JHT21_16655 PF00703 Glycosyl hydrolases family 2 JHT21_16655 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JHT21_16655 PF02837 Glycosyl hydrolases family 2, sugar binding domain JHT21_16660 PF02028 BCCT, betaine/carnitine/choline family transporter JHT21_16665 PF00392 Bacterial regulatory proteins, gntR family JHT21_16665 PF07702 UTRA domain JHT21_16690 PF00005 ABC transporter JHT21_16690 PF08402 TOBE domain JHT21_16705 PF00873 AcrB/AcrD/AcrF family JHT21_16710 PF13533 Biotin-lipoyl like JHT21_16715 PF13091 PLD-like domain JHT21_16740 PF00376 MerR family regulatory protein JHT21_16740 PF09278 MerR, DNA binding JHT21_16750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_16750 PF03466 LysR substrate binding domain JHT21_16760 PF13378 Enolase C-terminal domain-like JHT21_16760 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JHT21_16765 PF14492 Elongation Factor G, domain II JHT21_16765 PF03764 Elongation factor G, domain IV JHT21_16765 PF00009 Elongation factor Tu GTP binding domain JHT21_16765 PF03144 Elongation factor Tu domain 2 JHT21_16765 PF00679 Elongation factor G C-terminus JHT21_16790 PF02001 Protein of unknown function DUF134 JHT21_16795 PF17185 NlpE C-terminal OB domain JHT21_16795 PF04170 NlpE N-terminal domain JHT21_16800 PF06629 MltA-interacting protein MipA JHT21_16810 PF00691 OmpA family JHT21_16810 PF01389 OmpA-like transmembrane domain JHT21_16815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_16815 PF03466 LysR substrate binding domain JHT21_16840 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JHT21_16840 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JHT21_16850 PF00857 Isochorismatase family JHT21_16860 PF06628 Catalase-related immune-responsive JHT21_16860 PF00199 Catalase JHT21_16870 PF00455 DeoR C terminal sensor domain JHT21_16870 PF08220 DeoR-like helix-turn-helix domain JHT21_16875 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JHT21_16880 PF01625 Peptide methionine sulfoxide reductase JHT21_16880 PF01641 SelR domain JHT21_16900 PF07971 Glycosyl hydrolase family 92 JHT21_16900 PF17678 Glycosyl hydrolase family 92 N-terminal domain JHT21_16905 PF17678 Glycosyl hydrolase family 92 N-terminal domain JHT21_16905 PF07971 Glycosyl hydrolase family 92 JHT21_16915 PF17678 Glycosyl hydrolase family 92 N-terminal domain JHT21_16915 PF07971 Glycosyl hydrolase family 92 JHT21_16920 PF07971 Glycosyl hydrolase family 92 JHT21_16920 PF17678 Glycosyl hydrolase family 92 N-terminal domain JHT21_16925 PF03060 Nitronate monooxygenase JHT21_16930 PF02872 5'-nucleotidase, C-terminal domain JHT21_16930 PF00149 Calcineurin-like phosphoesterase JHT21_16940 PF00440 Bacterial regulatory proteins, tetR family JHT21_16940 PF08359 YsiA-like protein, C-terminal region JHT21_16955 PF03466 LysR substrate binding domain JHT21_16955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_16960 PF01810 LysE type translocator JHT21_16975 PF00118 TCP-1/cpn60 chaperonin family JHT21_16980 PF00166 Chaperonin 10 Kd subunit JHT21_16985 PF00581 Rhodanese-like domain JHT21_17010 PF01070 FMN-dependent dehydrogenase JHT21_17030 PF00669 Bacterial flagellin N-terminal helical region JHT21_17035 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JHT21_17035 PF00460 Flagella basal body rod protein JHT21_17040 PF10135 Rod binding protein JHT21_17040 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JHT21_17045 PF02119 Flagellar P-ring protein JHT21_17050 PF02107 Flagellar L-ring protein JHT21_17055 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JHT21_17055 PF00460 Flagella basal body rod protein JHT21_17060 PF00460 Flagella basal body rod protein JHT21_17060 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JHT21_17065 PF07559 Flagellar basal body protein FlaE JHT21_17065 PF00460 Flagella basal body rod protein JHT21_17065 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JHT21_17070 PF03963 Flagellar hook capping protein - N-terminal region JHT21_17070 PF13860 FlgD Ig-like domain JHT21_17070 PF13861 FlgD Tudor-like domain JHT21_17075 PF00460 Flagella basal body rod protein JHT21_17075 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JHT21_17080 PF00460 Flagella basal body rod protein JHT21_17100 PF01464 Transglycosylase SLT domain JHT21_17105 PF00133 tRNA synthetases class I (I, L, M and V) JHT21_17105 PF08264 Anticodon-binding domain of tRNA JHT21_17125 PF03313 Serine dehydratase alpha chain JHT21_17125 PF03315 Serine dehydratase beta chain JHT21_17130 PF00854 POT family JHT21_17140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_17140 PF03466 LysR substrate binding domain JHT21_17150 PF03466 LysR substrate binding domain JHT21_17150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_17155 PF01389 OmpA-like transmembrane domain JHT21_17155 PF00691 OmpA family JHT21_17160 PF18027 Cytosolic carboxypeptidase N-terminal domain JHT21_17160 PF00246 Zinc carboxypeptidase JHT21_17165 PF01266 FAD dependent oxidoreductase JHT21_17170 PF04393 Protein of unknown function (DUF535) JHT21_17185 PF00392 Bacterial regulatory proteins, gntR family JHT21_17185 PF07702 UTRA domain JHT21_17190 PF00528 Binding-protein-dependent transport system inner membrane component JHT21_17195 PF00005 ABC transporter JHT21_17210 PF00266 Aminotransferase class-V JHT21_17215 PF00202 Aminotransferase class-III JHT21_17220 PF13419 Haloacid dehalogenase-like hydrolase JHT21_17225 PF00356 Bacterial regulatory proteins, lacI family JHT21_17230 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JHT21_17240 PF03611 PTS system sugar-specific permease component JHT21_17250 PF05922 Peptidase inhibitor I9 JHT21_17250 PF00082 Subtilase family JHT21_17255 PF00657 GDSL-like Lipase/Acylhydrolase JHT21_17260 PF02321 Outer membrane efflux protein JHT21_17265 PF12704 MacB-like periplasmic core domain JHT21_17265 PF02687 FtsX-like permease family JHT21_17265 PF00005 ABC transporter JHT21_17270 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JHT21_17275 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) JHT21_17280 PF00194 Eukaryotic-type carbonic anhydrase JHT21_17285 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) JHT21_17300 PF13419 Haloacid dehalogenase-like hydrolase JHT21_17305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_17305 PF03466 LysR substrate binding domain JHT21_17340 PF12464 Maltose acetyltransferase JHT21_17340 PF14602 Hexapeptide repeat of succinyl-transferase JHT21_17345 PF02566 OsmC-like protein JHT21_17375 PF02566 OsmC-like protein JHT21_17380 PF01625 Peptide methionine sulfoxide reductase JHT21_17380 PF01641 SelR domain JHT21_17395 PF04244 Deoxyribodipyrimidine photo-lyase-related protein JHT21_17400 PF00875 DNA photolyase JHT21_17400 PF03441 FAD binding domain of DNA photolyase JHT21_17405 PF00990 Diguanylate cyclase, GGDEF domain JHT21_17420 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT21_17420 PF00672 HAMP domain JHT21_17420 PF12729 Four helix bundle sensory module for signal transduction JHT21_17425 PF00990 Diguanylate cyclase, GGDEF domain JHT21_17425 PF05230 MASE2 domain JHT21_17430 PF13532 2OG-Fe(II) oxygenase superfamily JHT21_17440 PF07670 Nucleoside recognition JHT21_17440 PF01773 Na+ dependent nucleoside transporter N-terminus JHT21_17440 PF07662 Na+ dependent nucleoside transporter C-terminus JHT21_17455 PF01212 Beta-eliminating lyase JHT21_17465 PF01266 FAD dependent oxidoreductase JHT21_17480 PF05525 Branched-chain amino acid transport protein JHT21_17485 PF00990 Diguanylate cyclase, GGDEF domain JHT21_17485 PF08448 PAS fold JHT21_17490 PF02954 Bacterial regulatory protein, Fis family JHT21_17490 PF00072 Response regulator receiver domain JHT21_17490 PF00158 Sigma-54 interaction domain JHT21_17495 PF00512 His Kinase A (phospho-acceptor) domain JHT21_17495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_17495 PF02743 Cache domain JHT21_17500 PF00232 Glycosyl hydrolase family 1 JHT21_17525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_17525 PF03466 LysR substrate binding domain JHT21_17530 PF18030 RimK PreATP-grasp domain JHT21_17530 PF08443 RimK-like ATP-grasp domain JHT21_17535 PF18030 RimK PreATP-grasp domain JHT21_17535 PF08443 RimK-like ATP-grasp domain JHT21_17540 PF00753 Metallo-beta-lactamase superfamily JHT21_17545 PF17810 Arginine decarboxylase helical bundle domain JHT21_17545 PF17944 Arginine decarboxylase C-terminal helical extension JHT21_17545 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JHT21_17550 PF00491 Arginase family JHT21_17555 PF07690 Major Facilitator Superfamily JHT21_17560 PF00326 Prolyl oligopeptidase family JHT21_17560 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain JHT21_17575 PF00950 ABC 3 transport family JHT21_17580 PF00005 ABC transporter JHT21_17585 PF01297 Zinc-uptake complex component A periplasmic JHT21_17625 PF02472 Biopolymer transport protein ExbD/TolR JHT21_17630 PF01618 MotA/TolQ/ExbB proton channel family JHT21_17635 PF01618 MotA/TolQ/ExbB proton channel family JHT21_17645 PF07715 TonB-dependent Receptor Plug Domain JHT21_17645 PF00593 TonB dependent receptor JHT21_17650 PF00672 HAMP domain JHT21_17650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_17650 PF16750 Sensor domain of 2-component histidine kinase JHT21_17650 PF00512 His Kinase A (phospho-acceptor) domain JHT21_17655 PF00072 Response regulator receiver domain JHT21_17655 PF00486 Transcriptional regulatory protein, C terminal JHT21_17660 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JHT21_17660 PF00056 lactate/malate dehydrogenase, NAD binding domain JHT21_17665 PF03009 Glycerophosphoryl diester phosphodiesterase family JHT21_17675 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JHT21_17675 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JHT21_17680 PF10928 Protein of unknown function (DUF2810) JHT21_17730 PF04013 Putative SAM-dependent RNA methyltransferase JHT21_17735 PF01523 Putative modulator of DNA gyrase JHT21_17740 PF01523 Putative modulator of DNA gyrase JHT21_17745 PF08543 Phosphomethylpyrimidine kinase JHT21_17750 PF00005 ABC transporter JHT21_17755 PF00528 Binding-protein-dependent transport system inner membrane component JHT21_17760 PF09084 NMT1/THI5 like JHT21_17765 PF03070 TENA/THI-4/PQQC family JHT21_17770 PF02110 Hydroxyethylthiazole kinase family JHT21_17775 PF02581 Thiamine monophosphate synthase JHT21_17785 PF00384 Molybdopterin oxidoreductase JHT21_17785 PF18364 Molybdopterin oxidoreductase N-terminal domain JHT21_17785 PF01568 Molydopterin dinucleotide binding domain JHT21_17790 PF03264 NapC/NirT cytochrome c family, N-terminal region JHT21_17815 PF00583 Acetyltransferase (GNAT) family JHT21_17835 PF00155 Aminotransferase class I and II JHT21_17835 PF00392 Bacterial regulatory proteins, gntR family JHT21_17840 PF02595 Glycerate kinase family JHT21_17845 PF02447 GntP family permease JHT21_17850 PF13556 PucR C-terminal helix-turn-helix domain JHT21_17850 PF17853 GGDEF-like domain JHT21_17850 PF05651 Putative sugar diacid recognition JHT21_17875 PF13419 Haloacid dehalogenase-like hydrolase JHT21_17890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_17890 PF03466 LysR substrate binding domain JHT21_17900 PF03466 LysR substrate binding domain JHT21_17900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_17905 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JHT21_17910 PF01661 Macro domain JHT21_17915 PF01204 Trehalase JHT21_17925 PF12706 Beta-lactamase superfamily domain JHT21_17935 PF07690 Major Facilitator Superfamily JHT21_17940 PF13533 Biotin-lipoyl like JHT21_17945 PF03922 OmpW family JHT21_17950 PF13599 Pentapeptide repeats (9 copies) JHT21_17965 PF18416 N-acetylglucosamine binding protein domain 2 JHT21_17965 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading JHT21_17970 PF01037 Lrp/AsnC ligand binding domain JHT21_17975 PF01810 LysE type translocator JHT21_17980 PF08021 Siderophore-interacting FAD-binding domain JHT21_17980 PF04954 Siderophore-interacting protein JHT21_17985 PF14583 Oligogalacturonate lyase JHT21_17990 PF00474 Sodium:solute symporter family JHT21_17995 PF13229 Right handed beta helix region JHT21_18010 PF01081 KDPG and KHG aldolase JHT21_18015 PF00294 pfkB family carbohydrate kinase JHT21_18030 PF07883 Cupin domain JHT21_18035 PF10688 Bacterial inner membrane protein JHT21_18045 PF01614 Bacterial transcriptional regulator JHT21_18045 PF09339 IclR helix-turn-helix domain JHT21_18060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_18060 PF03466 LysR substrate binding domain JHT21_18065 PF00797 N-acetyltransferase JHT21_18070 PF00107 Zinc-binding dehydrogenase JHT21_18070 PF08240 Alcohol dehydrogenase GroES-like domain JHT21_18075 PF00756 Putative esterase JHT21_18085 PF17152 Periplasmic sensor domain JHT21_18085 PF00990 Diguanylate cyclase, GGDEF domain JHT21_18100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_18100 PF03466 LysR substrate binding domain JHT21_18115 PF00849 RNA pseudouridylate synthase JHT21_18120 PF01554 MatE JHT21_18125 PF00563 EAL domain JHT21_18125 PF00990 Diguanylate cyclase, GGDEF domain JHT21_18135 PF06865 Pyrimidine/purine nucleoside phosphorylase JHT21_18145 PF08329 Chitinase A, N-terminal domain JHT21_18145 PF00704 Glycosyl hydrolases family 18 JHT21_18165 PF03600 Citrate transporter JHT21_18175 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JHT21_18185 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JHT21_18185 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JHT21_18190 PF06029 AlkA N-terminal domain JHT21_18190 PF00730 HhH-GPD superfamily base excision DNA repair protein JHT21_18200 PF07681 DoxX JHT21_18205 PF02678 Pirin JHT21_18205 PF17954 Quercetinase C-terminal cupin domain JHT21_18210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_18210 PF03466 LysR substrate binding domain JHT21_18225 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JHT21_18235 PF03616 Sodium/glutamate symporter JHT21_18240 PF00392 Bacterial regulatory proteins, gntR family JHT21_18240 PF00155 Aminotransferase class I and II JHT21_18245 PF00005 ABC transporter JHT21_18255 PF03616 Sodium/glutamate symporter JHT21_18260 PF00132 Bacterial transferase hexapeptide (six repeats) JHT21_18275 PF17200 Single Cache domain 2 JHT21_18275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT21_18275 PF00672 HAMP domain JHT21_18280 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JHT21_18290 PF00072 Response regulator receiver domain JHT21_18290 PF04397 LytTr DNA-binding domain JHT21_18295 PF07694 5TMR of 5TMR-LYT JHT21_18295 PF13492 GAF domain JHT21_18295 PF06580 Histidine kinase JHT21_18295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_18325 PF01098 Cell cycle protein JHT21_18330 PF01709 Transcriptional regulator JHT21_18340 PF00512 His Kinase A (phospho-acceptor) domain JHT21_18340 PF17149 Periplasmic sensor domain found in signal transduction proteins JHT21_18340 PF00672 HAMP domain JHT21_18340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_18340 PF01627 Hpt domain JHT21_18340 PF00072 Response regulator receiver domain JHT21_18350 PF08719 Domain of unknown function (DUF1768) JHT21_18350 PF00925 GTP cyclohydrolase II JHT21_18360 PF00005 ABC transporter JHT21_18360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JHT21_18365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JHT21_18365 PF00005 ABC transporter JHT21_18380 PF18607 ParA helix turn helix domain JHT21_18380 PF13614 AAA domain JHT21_18385 PF02195 ParB-like nuclease domain JHT21_18385 PF08775 ParB family JHT21_18390 PF13718 GNAT acetyltransferase 2 JHT21_18390 PF05127 Helicase JHT21_18400 PF00132 Bacterial transferase hexapeptide (six repeats) JHT21_18405 PF03466 LysR substrate binding domain JHT21_18405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_18410 PF03575 Peptidase family S51 JHT21_18415 PF00267 Gram-negative porin JHT21_18420 PF00367 phosphotransferase system, EIIB JHT21_18420 PF02378 Phosphotransferase system, EIIC JHT21_18425 PF01380 SIS domain JHT21_18430 PF01418 Helix-turn-helix domain, rpiR family JHT21_18430 PF01380 SIS domain JHT21_18435 PF00246 Zinc carboxypeptidase JHT21_18440 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JHT21_18445 PF03358 NADPH-dependent FMN reductase JHT21_18455 PF00664 ABC transporter transmembrane region JHT21_18455 PF00005 ABC transporter JHT21_18455 PF03412 Peptidase C39 family JHT21_18470 PF00529 HlyD membrane-fusion protein of T1SS JHT21_18475 PF00158 Sigma-54 interaction domain JHT21_18475 PF02954 Bacterial regulatory protein, Fis family JHT21_18475 PF00072 Response regulator receiver domain JHT21_18480 PF00512 His Kinase A (phospho-acceptor) domain JHT21_18480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_18480 PF02743 Cache domain JHT21_18485 PF01243 Pyridoxamine 5'-phosphate oxidase JHT21_18485 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region JHT21_18495 PF12833 Helix-turn-helix domain JHT21_18500 PF01619 Proline dehydrogenase JHT21_18500 PF14850 DNA-binding domain of Proline dehydrogenase JHT21_18500 PF00171 Aldehyde dehydrogenase family JHT21_18500 PF18327 Proline utilization A proline dehydrogenase N-terminal domain JHT21_18510 PF00474 Sodium:solute symporter family JHT21_18545 PF01037 Lrp/AsnC ligand binding domain JHT21_18555 PF00664 ABC transporter transmembrane region JHT21_18555 PF00005 ABC transporter JHT21_18565 PF06719 AraC-type transcriptional regulator N-terminus JHT21_18565 PF12833 Helix-turn-helix domain JHT21_18580 PF00271 Helicase conserved C-terminal domain JHT21_18580 PF00270 DEAD/DEAH box helicase JHT21_18585 PF03475 3-alpha domain JHT21_18585 PF03473 MOSC domain JHT21_18600 PF11975 Family 4 glycosyl hydrolase C-terminal domain JHT21_18600 PF02056 Family 4 glycosyl hydrolase JHT21_18605 PF03466 LysR substrate binding domain JHT21_18605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_18610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT21_18610 PF00672 HAMP domain JHT21_18610 PF02743 Cache domain JHT21_18620 PF04542 Sigma-70 region 2 JHT21_18620 PF08281 Sigma-70, region 4 JHT21_18625 PF01965 DJ-1/PfpI family JHT21_18625 PF12833 Helix-turn-helix domain JHT21_18630 PF03466 LysR substrate binding domain JHT21_18630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_18645 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHT21_18645 PF13192 Thioredoxin domain JHT21_18650 PF10417 C-terminal domain of 1-Cys peroxiredoxin JHT21_18650 PF00578 AhpC/TSA family JHT21_18655 PF01047 MarR family JHT21_18660 PF02566 OsmC-like protein JHT21_18675 PF02311 AraC-like ligand binding domain JHT21_18675 PF12833 Helix-turn-helix domain JHT21_18685 PF11762 L-arabinose isomerase C-terminal domain JHT21_18685 PF02610 L-arabinose isomerase JHT21_18690 PF00596 Class II Aldolase and Adducin N-terminal domain JHT21_18695 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JHT21_18695 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JHT21_18700 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JHT21_18705 PF00005 ABC transporter JHT21_18710 PF02653 Branched-chain amino acid transport system / permease component JHT21_18715 PF01136 Peptidase family U32 JHT21_18725 PF00367 phosphotransferase system, EIIB JHT21_18725 PF02378 Phosphotransferase system, EIIC JHT21_18730 PF00486 Transcriptional regulatory protein, C terminal JHT21_18730 PF00072 Response regulator receiver domain JHT21_18735 PF08521 Two-component sensor kinase N-terminal JHT21_18735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_18735 PF00512 His Kinase A (phospho-acceptor) domain JHT21_18740 PF01547 Bacterial extracellular solute-binding protein JHT21_18745 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JHT21_18745 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JHT21_18750 PF06276 Ferric iron reductase FhuF-like transporter JHT21_18750 PF04183 IucA / IucC family JHT21_18760 PF06276 Ferric iron reductase FhuF-like transporter JHT21_18760 PF04183 IucA / IucC family JHT21_18765 PF02655 ATP-grasp domain JHT21_18765 PF00206 Lyase JHT21_18770 PF07715 TonB-dependent Receptor Plug Domain JHT21_18770 PF00593 TonB dependent receptor JHT21_18775 PF07660 Secretin and TonB N terminus short domain JHT21_18775 PF00593 TonB dependent receptor JHT21_18775 PF07715 TonB-dependent Receptor Plug Domain JHT21_18780 PF01497 Periplasmic binding protein JHT21_18785 PF01032 FecCD transport family JHT21_18790 PF01032 FecCD transport family JHT21_18795 PF00005 ABC transporter JHT21_18800 PF17200 Single Cache domain 2 JHT21_18800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT21_18800 PF00672 HAMP domain JHT21_18805 PF05193 Peptidase M16 inactive domain JHT21_18805 PF00675 Insulinase (Peptidase family M16) JHT21_18815 PF01551 Peptidase family M23 JHT21_18815 PF04225 Opacity-associated protein A LysM-like domain JHT21_18825 PF07690 Major Facilitator Superfamily JHT21_18835 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JHT21_18835 PF00128 Alpha amylase, catalytic domain JHT21_18840 PF02264 LamB porin JHT21_18855 PF02903 Alpha amylase, N-terminal ig-like domain JHT21_18855 PF16657 Maltogenic Amylase, C-terminal domain JHT21_18855 PF00128 Alpha amylase, catalytic domain JHT21_18860 PF04231 Endonuclease I JHT21_18865 PF18494 Pullulanase Ins domain JHT21_18865 PF17967 Pullulanase N2 domain JHT21_18865 PF11852 Domain of unknown function (DUF3372) JHT21_18865 PF03714 Bacterial pullanase-associated domain JHT21_18865 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JHT21_18880 PF01276 Orn/Lys/Arg decarboxylase, major domain JHT21_18880 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JHT21_18880 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain JHT21_18885 PF13520 Amino acid permease JHT21_18895 PF08543 Phosphomethylpyrimidine kinase JHT21_18905 PF00375 Sodium:dicarboxylate symporter family JHT21_18910 PF03193 RsgA GTPase JHT21_18915 PF00367 phosphotransferase system, EIIB JHT21_18915 PF02378 Phosphotransferase system, EIIC JHT21_18925 PF02630 SCO1/SenC JHT21_18940 PF17874 MalT-like TPR region JHT21_18940 PF00196 Bacterial regulatory proteins, luxR family JHT21_18945 PF00343 Carbohydrate phosphorylase JHT21_18950 PF02446 4-alpha-glucanotransferase JHT21_18955 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JHT21_18955 PF00128 Alpha amylase, catalytic domain JHT21_18955 PF02806 Alpha amylase, C-terminal all-beta domain JHT21_18960 PF00912 Transglycosylase JHT21_18965 PF00128 Alpha amylase, catalytic domain JHT21_18975 PF07670 Nucleoside recognition JHT21_18980 PF07670 Nucleoside recognition JHT21_18985 PF07687 Peptidase dimerisation domain JHT21_18985 PF01546 Peptidase family M20/M25/M40 JHT21_18990 PF06803 Protein of unknown function (DUF1232) JHT21_18995 PF00375 Sodium:dicarboxylate symporter family JHT21_19005 PF03466 LysR substrate binding domain JHT21_19005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_19010 PF08803 Putative mono-oxygenase ydhR JHT21_19020 PF13807 G-rich domain on putative tyrosine kinase JHT21_19020 PF13614 AAA domain JHT21_19020 PF02706 Chain length determinant protein JHT21_19025 PF01451 Low molecular weight phosphotyrosine protein phosphatase JHT21_19030 PF10531 SLBB domain JHT21_19030 PF18412 Outer-membrane lipoprotein Wza C-terminal domain JHT21_19030 PF02563 Polysaccharide biosynthesis/export protein JHT21_19035 PF00881 Nitroreductase family JHT21_19040 PF01914 MarC family integral membrane protein JHT21_19045 PF01734 Patatin-like phospholipase JHT21_19050 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading JHT21_19050 PF18416 N-acetylglucosamine binding protein domain 2 JHT21_19055 PF17773 UPF0176 acylphosphatase like domain JHT21_19055 PF00581 Rhodanese-like domain JHT21_19065 PF00561 alpha/beta hydrolase fold JHT21_19070 PF00768 D-alanyl-D-alanine carboxypeptidase JHT21_19070 PF07943 Penicillin-binding protein 5, C-terminal domain JHT21_19075 PF00128 Alpha amylase, catalytic domain JHT21_19075 PF00686 Starch binding domain JHT21_19080 PF12833 Helix-turn-helix domain JHT21_19080 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JHT21_19085 PF00881 Nitroreductase family JHT21_19095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_19095 PF03466 LysR substrate binding domain JHT21_19100 PF09905 DNA-binding protein VF530 JHT21_19110 PF00175 Oxidoreductase NAD-binding domain JHT21_19110 PF00970 Oxidoreductase FAD-binding domain JHT21_19120 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) JHT21_19125 PF01594 AI-2E family transporter JHT21_19135 PF13533 Biotin-lipoyl like JHT21_19155 PF00892 EamA-like transporter family JHT21_19160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_19160 PF03466 LysR substrate binding domain JHT21_19165 PF07690 Major Facilitator Superfamily JHT21_19175 PF00583 Acetyltransferase (GNAT) family JHT21_19185 PF00923 Transaldolase/Fructose-6-phosphate aldolase JHT21_19190 PF04055 Radical SAM superfamily JHT21_19195 PF01228 Glycine radical JHT21_19195 PF02901 Pyruvate formate lyase-like JHT21_19215 PF08000 Bacterial PH domain JHT21_19225 PF00691 OmpA family JHT21_19225 PF13677 Membrane MotB of proton-channel complex MotA/MotB JHT21_19230 PF01618 MotA/TolQ/ExbB proton channel family JHT21_19235 PF04542 Sigma-70 region 2 JHT21_19235 PF04545 Sigma-70, region 4 JHT21_19240 PF03748 Flagellar basal body-associated protein FliL JHT21_19255 PF02561 Flagellar protein FliS JHT21_19260 PF07196 Flagellin hook IN motif JHT21_19260 PF07195 Flagellar hook-associated protein 2 C-terminus JHT21_19260 PF02465 Flagellar hook-associated protein 2 N-terminus JHT21_19270 PF00700 Bacterial flagellin C-terminal helical region JHT21_19270 PF00669 Bacterial flagellin N-terminal helical region JHT21_19280 PF00771 FHIPEP family JHT21_19285 PF01312 FlhB HrpN YscU SpaS Family JHT21_19290 PF01311 Bacterial export proteins, family 1 JHT21_19295 PF01313 Bacterial export proteins, family 3 JHT21_19300 PF00813 FliP family JHT21_19305 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JHT21_19320 PF00158 Sigma-54 interaction domain JHT21_19320 PF02954 Bacterial regulatory protein, Fis family JHT21_19320 PF00072 Response regulator receiver domain JHT21_19325 PF02049 Flagellar hook-basal body complex protein FliE JHT21_19330 PF08345 Flagellar M-ring protein C-terminal JHT21_19330 PF01514 Secretory protein of YscJ/FliF family JHT21_19335 PF01706 FliG C-terminal domain JHT21_19335 PF14842 FliG N-terminal domain JHT21_19335 PF14841 FliG middle domain JHT21_19345 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JHT21_19345 PF18269 T3SS EscN ATPase C-terminal domain JHT21_19360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_19360 PF03466 LysR substrate binding domain JHT21_19395 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JHT21_19400 PF03466 LysR substrate binding domain JHT21_19400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_19420 PF00486 Transcriptional regulatory protein, C terminal JHT21_19420 PF00072 Response regulator receiver domain JHT21_19425 PF13426 PAS domain JHT21_19425 PF08448 PAS fold JHT21_19425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_19425 PF00512 His Kinase A (phospho-acceptor) domain JHT21_19425 PF00072 Response regulator receiver domain JHT21_19430 PF00080 Copper/zinc superoxide dismutase (SODC) JHT21_19435 PF00266 Aminotransferase class-V JHT21_19440 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHT21_19445 PF00990 Diguanylate cyclase, GGDEF domain JHT21_19445 PF03707 Bacterial signalling protein N terminal repeat JHT21_19445 PF00563 EAL domain JHT21_19450 PF00155 Aminotransferase class I and II JHT21_19455 PF08240 Alcohol dehydrogenase GroES-like domain JHT21_19455 PF00107 Zinc-binding dehydrogenase JHT21_19485 PF00194 Eukaryotic-type carbonic anhydrase JHT21_19490 PF00924 Mechanosensitive ion channel JHT21_19500 PF01070 FMN-dependent dehydrogenase JHT21_19505 PF02652 L-lactate permease JHT21_19510 PF03466 LysR substrate binding domain JHT21_19510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_19515 PF00326 Prolyl oligopeptidase family JHT21_19515 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain JHT21_19520 PF00005 ABC transporter JHT21_19520 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JHT21_19530 PF05362 Lon protease (S16) C-terminal proteolytic domain JHT21_19530 PF13654 AAA domain JHT21_19535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT21_19535 PF00672 HAMP domain JHT21_19540 PF07238 PilZ domain JHT21_19540 PF12945 Flagellar protein YcgR JHT21_19555 PF00583 Acetyltransferase (GNAT) family JHT21_19560 PF12838 4Fe-4S dicluster domain JHT21_19560 PF12800 4Fe-4S binding domain JHT21_19565 PF12801 4Fe-4S binding domain JHT21_19565 PF13237 4Fe-4S dicluster domain JHT21_19580 PF12558 ATP-binding cassette cobalt transporter JHT21_19580 PF00005 ABC transporter JHT21_19585 PF07155 ECF-type riboflavin transporter, S component JHT21_19590 PF00529 HlyD membrane-fusion protein of T1SS JHT21_19590 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JHT21_19595 PF11742 Protein of unknown function (DUF3302) JHT21_19600 PF00990 Diguanylate cyclase, GGDEF domain JHT21_19615 PF01048 Phosphorylase superfamily JHT21_19620 PF08349 Protein of unknown function (DUF1722) JHT21_19625 PF13411 MerR HTH family regulatory protein JHT21_19630 PF00875 DNA photolyase JHT21_19630 PF03441 FAD binding domain of DNA photolyase JHT21_19635 PF01476 LysM domain JHT21_19635 PF03734 L,D-transpeptidase catalytic domain JHT21_19635 PF17969 L,D-transpeptidase C-terminal domain JHT21_19645 PF00270 DEAD/DEAH box helicase JHT21_19645 PF00271 Helicase conserved C-terminal domain JHT21_19650 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain JHT21_19650 PF00326 Prolyl oligopeptidase family JHT21_19655 PF07715 TonB-dependent Receptor Plug Domain JHT21_19655 PF00593 TonB dependent receptor JHT21_19675 PF00672 HAMP domain JHT21_19675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT21_19680 PF12849 PBP superfamily domain JHT21_19685 PF00528 Binding-protein-dependent transport system inner membrane component JHT21_19690 PF00528 Binding-protein-dependent transport system inner membrane component JHT21_19695 PF00005 ABC transporter JHT21_19710 PF07584 Aerotolerance regulator N-terminal JHT21_19710 PF13519 von Willebrand factor type A domain JHT21_19715 PF13519 von Willebrand factor type A domain JHT21_19725 PF01882 Protein of unknown function DUF58 JHT21_19730 PF07726 ATPase family associated with various cellular activities (AAA) JHT21_19730 PF17863 AAA lid domain JHT21_19735 PF02743 Cache domain JHT21_19735 PF00672 HAMP domain JHT21_19735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT21_19745 PF00196 Bacterial regulatory proteins, luxR family JHT21_19750 PF00196 Bacterial regulatory proteins, luxR family JHT21_19760 PF00664 ABC transporter transmembrane region JHT21_19760 PF00005 ABC transporter JHT21_19765 PF00529 HlyD membrane-fusion protein of T1SS JHT21_19780 PF00691 OmpA family JHT21_19790 PF01032 FecCD transport family JHT21_19795 PF01497 Periplasmic binding protein JHT21_19800 PF00005 ABC transporter JHT21_19805 PF07715 TonB-dependent Receptor Plug Domain JHT21_19805 PF00593 TonB dependent receptor JHT21_19810 PF00005 ABC transporter JHT21_19810 PF00664 ABC transporter transmembrane region JHT21_19815 PF13493 Domain of unknown function (DUF4118) JHT21_19815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_19815 PF00512 His Kinase A (phospho-acceptor) domain JHT21_19815 PF02702 Osmosensitive K+ channel His kinase sensor domain JHT21_19815 PF13493 Domain of unknown function (DUF4118) JHT21_19815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_19815 PF00512 His Kinase A (phospho-acceptor) domain JHT21_19815 PF02702 Osmosensitive K+ channel His kinase sensor domain JHT21_19820 PF00072 Response regulator receiver domain JHT21_19820 PF00486 Transcriptional regulatory protein, C terminal JHT21_19825 PF02080 TrkA-C domain JHT21_19825 PF02254 TrkA-N domain JHT21_19830 PF02386 Cation transport protein JHT21_19835 PF00563 EAL domain JHT21_19835 PF00990 Diguanylate cyclase, GGDEF domain JHT21_19835 PF03707 Bacterial signalling protein N terminal repeat JHT21_19840 PF00127 Copper binding proteins, plastocyanin/azurin family JHT21_19845 PF13419 Haloacid dehalogenase-like hydrolase JHT21_19855 PF01238 Phosphomannose isomerase type I JHT21_19860 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JHT21_19860 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JHT21_19865 PF12833 Helix-turn-helix domain JHT21_19875 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JHT21_19885 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JHT21_19885 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JHT21_19890 PF00199 Catalase JHT21_19890 PF06628 Catalase-related immune-responsive JHT21_19895 PF13417 Glutathione S-transferase, N-terminal domain JHT21_19900 PF16884 N-terminal domain of oxidoreductase JHT21_19900 PF00107 Zinc-binding dehydrogenase JHT21_19905 PF00440 Bacterial regulatory proteins, tetR family JHT21_19905 PF16925 Tetracyclin repressor-like, C-terminal domain JHT21_19910 PF04266 ASCH domain JHT21_19940 PF13439 Glycosyltransferase Family 4 JHT21_19940 PF00534 Glycosyl transferases group 1 JHT21_19950 PF13614 AAA domain JHT21_19950 PF13807 G-rich domain on putative tyrosine kinase JHT21_19950 PF02706 Chain length determinant protein JHT21_19965 PF02397 Bacterial sugar transferase JHT21_19970 PF00005 ABC transporter JHT21_19970 PF08402 TOBE domain JHT21_19975 PF01547 Bacterial extracellular solute-binding protein JHT21_19980 PF14785 Maltose transport system permease protein MalF P2 domain JHT21_19980 PF00528 Binding-protein-dependent transport system inner membrane component JHT21_19985 PF00528 Binding-protein-dependent transport system inner membrane component JHT21_20000 PF13737 Transposase DDE domain JHT21_20010 PF00563 EAL domain JHT21_20010 PF00990 Diguanylate cyclase, GGDEF domain JHT21_20010 PF13426 PAS domain JHT21_20030 PF03421 YopJ Serine/Threonine acetyltransferase JHT21_20110 PF00771 FHIPEP family JHT21_20115 PF01312 FlhB HrpN YscU SpaS Family JHT21_20145 PF00486 Transcriptional regulatory protein, C terminal JHT21_20155 PF00813 FliP family JHT21_20170 PF00263 Bacterial type II and III secretion system protein JHT21_20170 PF03958 Bacterial type II/III secretion system short domain JHT21_20175 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JHT21_20175 PF18269 T3SS EscN ATPase C-terminal domain JHT21_20175 PF02874 ATP synthase alpha/beta family, beta-barrel domain JHT21_20230 PF00892 EamA-like transporter family JHT21_20240 PF13402 Peptidase M60, enhancin and enhancin-like JHT21_20240 PF17291 N-terminal domain of M60-like peptidases JHT21_20240 PF13322 Domain of unknown function (DUF4092) JHT21_20245 PF00816 H-NS histone family JHT21_20255 PF03347 Vibrio thermostable direct hemolysin JHT21_20260 PF12833 Helix-turn-helix domain JHT21_20265 PF00005 ABC transporter JHT21_20270 PF00005 ABC transporter JHT21_20270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JHT21_20275 PF00528 Binding-protein-dependent transport system inner membrane component JHT21_20275 PF12911 N-terminal TM domain of oligopeptide transport permease C JHT21_20280 PF00528 Binding-protein-dependent transport system inner membrane component JHT21_20285 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JHT21_20290 PF01774 UreD urease accessory protein JHT21_20295 PF00547 Urease, gamma subunit JHT21_20300 PF00699 Urease beta subunit JHT21_20305 PF01979 Amidohydrolase family JHT21_20305 PF00449 Urease alpha-subunit, N-terminal domain JHT21_20310 PF05194 UreE urease accessory protein, C-terminal domain JHT21_20310 PF02814 UreE urease accessory protein, N-terminal domain JHT21_20315 PF01730 UreF JHT21_20320 PF02492 CobW/HypB/UreG, nucleotide-binding domain JHT21_20350 PF01473 Putative cell wall binding repeat JHT21_20350 PF11713 Peptidase C80 family JHT21_20350 PF12919 TcdA/TcdB catalytic glycosyltransferase domain JHT21_20350 PF12920 TcdA/TcdB pore forming domain JHT21_20350 PF12918 TcdB toxin N-terminal helical domain JHT21_20360 PF02794 RTX toxin acyltransferase family JHT21_20365 PF00353 RTX calcium-binding nonapeptide repeat (4 copies) JHT21_20365 PF02382 N-terminal domain in RTX protein JHT21_20365 PF08339 RTX C-terminal domain JHT21_20370 PF00005 ABC transporter JHT21_20370 PF00664 ABC transporter transmembrane region JHT21_20370 PF03412 Peptidase C39 family JHT21_20390 PF02803 Thiolase, C-terminal domain JHT21_20390 PF00108 Thiolase, N-terminal domain JHT21_20405 PF05853 beta-keto acid cleavage enzyme JHT21_20450 PF00682 HMGL-like JHT21_20450 PF08502 LeuA allosteric (dimerisation) domain JHT21_20455 PF00293 NUDIX domain JHT21_20460 PF01872 RibD C-terminal domain JHT21_20465 PF00440 Bacterial regulatory proteins, tetR family JHT21_20465 PF02909 Tetracyclin repressor-like, C-terminal domain JHT21_20470 PF02798 Glutathione S-transferase, N-terminal domain JHT21_20475 PF07943 Penicillin-binding protein 5, C-terminal domain JHT21_20475 PF00768 D-alanyl-D-alanine carboxypeptidase JHT21_20490 PF08534 Redoxin JHT21_20490 PF00462 Glutaredoxin JHT21_20495 PF00962 Adenosine/AMP deaminase JHT21_20510 PF00313 'Cold-shock' DNA-binding domain JHT21_20520 PF01734 Patatin-like phospholipase JHT21_20530 PF01047 MarR family JHT21_20545 PF07690 Major Facilitator Superfamily JHT21_20555 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JHT21_20560 PF08019 Phosphoethanolamine transferase EptA/EptB JHT21_20560 PF00884 Sulfatase JHT21_20565 PF01219 Prokaryotic diacylglycerol kinase JHT21_20575 PF00672 HAMP domain JHT21_20575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_20575 PF00512 His Kinase A (phospho-acceptor) domain JHT21_20580 PF00072 Response regulator receiver domain JHT21_20580 PF00486 Transcriptional regulatory protein, C terminal JHT21_20585 PF00106 short chain dehydrogenase JHT21_20600 PF01323 DSBA-like thioredoxin domain JHT21_20615 PF00255 Glutathione peroxidase JHT21_20620 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JHT21_20630 PF07690 Major Facilitator Superfamily JHT21_20640 PF01966 HD domain JHT21_20650 PF07969 Amidohydrolase family JHT21_20655 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JHT21_20660 PF03448 MgtE intracellular N domain JHT21_20660 PF00571 CBS domain JHT21_20660 PF01769 Divalent cation transporter JHT21_20665 PF03109 ABC1 family JHT21_20675 PF00392 Bacterial regulatory proteins, gntR family JHT21_20675 PF00155 Aminotransferase class I and II JHT21_20680 PF13520 Amino acid permease JHT21_20685 PF13404 AsnC-type helix-turn-helix domain JHT21_20685 PF01037 Lrp/AsnC ligand binding domain JHT21_20690 PF03466 LysR substrate binding domain JHT21_20690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_20705 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JHT21_20705 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JHT21_20710 PF01627 Hpt domain JHT21_20710 PF00672 HAMP domain JHT21_20710 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JHT21_20710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_20710 PF00512 His Kinase A (phospho-acceptor) domain JHT21_20710 PF00072 Response regulator receiver domain JHT21_20715 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JHT21_20720 PF01554 MatE JHT21_20725 PF04363 Protein of unknown function (DUF496) JHT21_20735 PF04337 Protein of unknown function, DUF480 JHT21_20740 PF01541 GIY-YIG catalytic domain JHT21_20745 PF13407 Periplasmic binding protein domain JHT21_20750 PF00072 Response regulator receiver domain JHT21_20750 PF00512 His Kinase A (phospho-acceptor) domain JHT21_20750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_20750 PF09308 LuxQ, periplasmic JHT21_20760 PF00529 HlyD membrane-fusion protein of T1SS JHT21_20760 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JHT21_20780 PF01037 Lrp/AsnC ligand binding domain JHT21_20805 PF07549 SecD/SecF GG Motif JHT21_20805 PF13721 SecD export protein N-terminal TM region JHT21_20805 PF02355 Protein export membrane protein JHT21_20810 PF07549 SecD/SecF GG Motif JHT21_20810 PF02355 Protein export membrane protein JHT21_20825 PF00106 short chain dehydrogenase JHT21_20830 PF00108 Thiolase, N-terminal domain JHT21_20830 PF02803 Thiolase, C-terminal domain JHT21_20840 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus JHT21_20840 PF00561 alpha/beta hydrolase fold JHT21_20850 PF03264 NapC/NirT cytochrome c family, N-terminal region JHT21_20855 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) JHT21_20860 PF01568 Molydopterin dinucleotide binding domain JHT21_20860 PF00384 Molybdopterin oxidoreductase JHT21_20860 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JHT21_20870 PF12838 4Fe-4S dicluster domain JHT21_20870 PF13187 4Fe-4S dicluster domain JHT21_20875 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term JHT21_20875 PF00672 HAMP domain JHT21_20875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_20875 PF07730 Histidine kinase JHT21_20880 PF00072 Response regulator receiver domain JHT21_20880 PF00196 Bacterial regulatory proteins, luxR family JHT21_20895 PF01546 Peptidase family M20/M25/M40 JHT21_20895 PF07687 Peptidase dimerisation domain JHT21_20900 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JHT21_20905 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JHT21_20910 PF00873 AcrB/AcrD/AcrF family JHT21_20915 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT21_20915 PF00672 HAMP domain JHT21_20915 PF12729 Four helix bundle sensory module for signal transduction JHT21_20920 PF00472 RF-1 domain JHT21_20925 PF13419 Haloacid dehalogenase-like hydrolase JHT21_20930 PF00691 OmpA family JHT21_20930 PF01389 OmpA-like transmembrane domain JHT21_20935 PF00793 DAHP synthetase I family JHT21_20940 PF07690 Major Facilitator Superfamily JHT21_20945 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT21_20945 PF08447 PAS fold JHT21_20950 PF02780 Transketolase, C-terminal domain JHT21_20950 PF00456 Transketolase, thiamine diphosphate binding domain JHT21_20950 PF02779 Transketolase, pyrimidine binding domain JHT21_20955 PF00923 Transaldolase/Fructose-6-phosphate aldolase JHT21_20965 PF08329 Chitinase A, N-terminal domain JHT21_20965 PF00704 Glycosyl hydrolases family 18 JHT21_20970 PF00563 EAL domain JHT21_20970 PF03707 Bacterial signalling protein N terminal repeat JHT21_20970 PF00990 Diguanylate cyclase, GGDEF domain JHT21_20975 PF00581 Rhodanese-like domain JHT21_20995 PF00899 ThiF family JHT21_21000 PF00994 Probable molybdopterin binding domain JHT21_21000 PF03453 MoeA N-terminal region (domain I and II) JHT21_21000 PF03454 MoeA C-terminal region (domain IV) JHT21_21005 PF01227 GTP cyclohydrolase I JHT21_21010 PF01566 Natural resistance-associated macrophage protein JHT21_21020 PF00654 Voltage gated chloride channel JHT21_21035 PF00248 Aldo/keto reductase family JHT21_21040 PF00072 Response regulator receiver domain JHT21_21050 PF01256 Carbohydrate kinase JHT21_21050 PF03853 YjeF-related protein N-terminus JHT21_21055 PF00478 IMP dehydrogenase / GMP reductase domain JHT21_21060 PF00501 AMP-binding enzyme JHT21_21060 PF13193 AMP-binding enzyme C-terminal domain JHT21_21065 PF01012 Electron transfer flavoprotein domain JHT21_21065 PF00766 Electron transfer flavoprotein FAD-binding domain JHT21_21070 PF01012 Electron transfer flavoprotein domain JHT21_21080 PF00005 ABC transporter JHT21_21080 PF12399 Branched-chain amino acid ATP-binding cassette transporter JHT21_21105 PF00005 ABC transporter JHT21_21110 PF00501 AMP-binding enzyme JHT21_21110 PF14535 AMP-binding enzyme C-terminal domain JHT21_21115 PF05724 Thiopurine S-methyltransferase (TPMT) JHT21_21125 PF00034 Cytochrome c JHT21_21135 PF13411 MerR HTH family regulatory protein JHT21_21140 PF02627 Carboxymuconolactone decarboxylase family JHT21_21145 PF02567 Phenazine biosynthesis-like protein JHT21_21155 PF02322 Cytochrome bd terminal oxidase subunit II JHT21_21160 PF01654 Cytochrome bd terminal oxidase subunit I JHT21_21165 PF00155 Aminotransferase class I and II JHT21_21165 PF00392 Bacterial regulatory proteins, gntR family JHT21_21170 PF14602 Hexapeptide repeat of succinyl-transferase JHT21_21170 PF12464 Maltose acetyltransferase JHT21_21175 PF12794 Mechanosensitive ion channel inner membrane domain 1 JHT21_21175 PF12795 Mechanosensitive ion channel porin domain JHT21_21175 PF00924 Mechanosensitive ion channel JHT21_21190 PF00672 HAMP domain JHT21_21190 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JHT21_21190 PF00072 Response regulator receiver domain JHT21_21190 PF00512 His Kinase A (phospho-acceptor) domain JHT21_21190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_21190 PF01627 Hpt domain JHT21_21195 PF00682 HMGL-like JHT21_21200 PF02785 Biotin carboxylase C-terminal domain JHT21_21200 PF00289 Biotin carboxylase, N-terminal domain JHT21_21200 PF00364 Biotin-requiring enzyme JHT21_21200 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JHT21_21200 PF18140 Propionyl-coenzyme A carboxylase BT domain JHT21_21205 PF00378 Enoyl-CoA hydratase/isomerase JHT21_21210 PF01039 Carboxyl transferase domain JHT21_21215 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JHT21_21215 PF02770 Acyl-CoA dehydrogenase, middle domain JHT21_21215 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JHT21_21220 PF00376 MerR family regulatory protein JHT21_21220 PF09278 MerR, DNA binding JHT21_21225 PF02803 Thiolase, C-terminal domain JHT21_21225 PF00108 Thiolase, N-terminal domain JHT21_21230 PF00171 Aldehyde dehydrogenase family JHT21_21235 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JHT21_21235 PF02770 Acyl-CoA dehydrogenase, middle domain JHT21_21235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JHT21_21240 PF00378 Enoyl-CoA hydratase/isomerase JHT21_21250 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JHT21_21250 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JHT21_21260 PF00990 Diguanylate cyclase, GGDEF domain JHT21_21260 PF17151 Periplasmic sensor domain JHT21_21265 PF00440 Bacterial regulatory proteins, tetR family JHT21_21265 PF13977 BetI-type transcriptional repressor, C-terminal JHT21_21270 PF00171 Aldehyde dehydrogenase family JHT21_21275 PF00732 GMC oxidoreductase JHT21_21275 PF05199 GMC oxidoreductase JHT21_21280 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JHT21_21285 PF00528 Binding-protein-dependent transport system inner membrane component JHT21_21290 PF00571 CBS domain JHT21_21290 PF00005 ABC transporter JHT21_21295 PF00881 Nitroreductase family JHT21_21305 PF01145 SPFH domain / Band 7 family JHT21_21305 PF16200 C-terminal region of band_7 JHT21_21315 PF03707 Bacterial signalling protein N terminal repeat JHT21_21315 PF13188 PAS domain JHT21_21315 PF00563 EAL domain JHT21_21315 PF00990 Diguanylate cyclase, GGDEF domain JHT21_21320 PF03150 Di-haem cytochrome c peroxidase JHT21_21320 PF00034 Cytochrome c JHT21_21325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_21325 PF00512 His Kinase A (phospho-acceptor) domain JHT21_21325 PF09308 LuxQ, periplasmic JHT21_21325 PF00072 Response regulator receiver domain JHT21_21340 PF04116 Fatty acid hydroxylase superfamily JHT21_21380 PF01048 Phosphorylase superfamily JHT21_21385 PF00563 EAL domain JHT21_21385 PF00990 Diguanylate cyclase, GGDEF domain JHT21_21390 PF05025 RbsD / FucU transport protein family JHT21_21395 PF00005 ABC transporter JHT21_21400 PF02653 Branched-chain amino acid transport system / permease component JHT21_21405 PF13407 Periplasmic binding protein domain JHT21_21410 PF00294 pfkB family carbohydrate kinase JHT21_21415 PF00356 Bacterial regulatory proteins, lacI family JHT21_21425 PF04973 Nicotinamide mononucleotide transporter JHT21_21430 PF01048 Phosphorylase superfamily JHT21_21445 PF00072 Response regulator receiver domain JHT21_21445 PF00486 Transcriptional regulatory protein, C terminal JHT21_21460 PF00245 Alkaline phosphatase JHT21_21470 PF01483 Proprotein convertase P-domain JHT21_21470 PF00082 Subtilase family JHT21_21480 PF00072 Response regulator receiver domain JHT21_21480 PF00990 Diguanylate cyclase, GGDEF domain JHT21_21485 PF03222 Tryptophan/tyrosine permease family JHT21_21490 PF00583 Acetyltransferase (GNAT) family JHT21_21495 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JHT21_21495 PF00384 Molybdopterin oxidoreductase JHT21_21495 PF01568 Molydopterin dinucleotide binding domain JHT21_21500 PF10414 Sirohaem synthase dimerisation region JHT21_21500 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JHT21_21500 PF14824 Sirohaem biosynthesis protein central JHT21_21505 PF00591 Glycosyl transferase family, a/b domain JHT21_21505 PF02885 Glycosyl transferase family, helical bundle domain JHT21_21510 PF01738 Dienelactone hydrolase family JHT21_21515 PF03861 ANTAR domain JHT21_21515 PF08376 Nitrate and nitrite sensing JHT21_21525 PF00528 Binding-protein-dependent transport system inner membrane component JHT21_21530 PF00005 ABC transporter JHT21_21535 PF18267 Rubredoxin NAD+ reductase C-terminal domain JHT21_21535 PF04324 BFD-like [2Fe-2S] binding domain JHT21_21535 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHT21_21535 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JHT21_21535 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JHT21_21535 PF13806 Rieske-like [2Fe-2S] domain JHT21_21550 PF08361 MAATS-type transcriptional repressor, C-terminal region JHT21_21550 PF00440 Bacterial regulatory proteins, tetR family JHT21_21565 PF00211 Adenylate and Guanylate cyclase catalytic domain JHT21_21565 PF00072 Response regulator receiver domain JHT21_21590 PF00069 Protein kinase domain JHT21_21590 PF03793 PASTA domain JHT21_21605 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE JHT21_21610 PF00691 OmpA family JHT21_21610 PF13677 Membrane MotB of proton-channel complex MotA/MotB JHT21_21615 PF06761 Intracellular multiplication and human macrophage-killing JHT21_21615 PF06744 Type VI secretion protein IcmF C-terminal JHT21_21615 PF14331 ImcF-related N-terminal domain JHT21_21635 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 JHT21_21640 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath JHT21_21645 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath JHT21_21660 PF05947 Type VI secretion system, TssF JHT21_21670 PF10431 C-terminal, D2-small domain, of ClpB protein JHT21_21670 PF07724 AAA domain (Cdc48 subfamily) JHT21_21670 PF00004 ATPase family associated with various cellular activities (AAA) JHT21_21670 PF17871 AAA lid domain JHT21_21680 PF04717 Type VI secretion system, phage-baseplate injector JHT21_21680 PF06715 Gp5 C-terminal repeat (3 copies) JHT21_21695 PF00149 Calcineurin-like phosphoesterase JHT21_21695 PF12320 Type 5 capsule protein repressor C-terminal domain JHT21_21700 PF13476 AAA domain JHT21_21720 PF08212 Lipocalin-like domain JHT21_21730 PF07690 Major Facilitator Superfamily JHT21_21740 PF03606 C4-dicarboxylate anaerobic carrier JHT21_21745 PF00034 Cytochrome c JHT21_21750 PF01212 Beta-eliminating lyase JHT21_21760 PF12592 Protein of unknown function (DUF3763) JHT21_21760 PF17868 AAA lid domain JHT21_21760 PF07728 AAA domain (dynein-related subfamily) JHT21_21765 PF05762 VWA domain containing CoxE-like protein JHT21_21780 PF03466 LysR substrate binding domain JHT21_21780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_21785 PF01565 FAD binding domain JHT21_21785 PF09330 D-lactate dehydrogenase, membrane binding JHT21_21800 PF00842 Alanine racemase, C-terminal domain JHT21_21800 PF01168 Alanine racemase, N-terminal domain JHT21_21805 PF00672 HAMP domain JHT21_21805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT21_21820 PF09154 Domain of unknown function (DUF1939) JHT21_21820 PF00128 Alpha amylase, catalytic domain JHT21_21840 PF13462 Thioredoxin JHT21_21840 PF06965 Na+/H+ antiporter 1 JHT21_21875 PF14760 Rnk N-terminus JHT21_21875 PF01272 Transcription elongation factor, GreA/GreB, C-term JHT21_21880 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHT21_21880 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JHT21_21880 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JHT21_21880 PF04324 BFD-like [2Fe-2S] binding domain JHT21_21880 PF18267 Rubredoxin NAD+ reductase C-terminal domain JHT21_21885 PF13806 Rieske-like [2Fe-2S] domain JHT21_21890 PF01226 Formate/nitrite transporter JHT21_21895 PF14824 Sirohaem biosynthesis protein central JHT21_21895 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JHT21_21895 PF10414 Sirohaem synthase dimerisation region JHT21_21910 PF03605 Anaerobic c4-dicarboxylate membrane transporter JHT21_21920 PF07715 TonB-dependent Receptor Plug Domain JHT21_21920 PF00593 TonB dependent receptor JHT21_21935 PF11756 Nitrous oxide-stimulated promoter JHT21_21940 PF01554 MatE JHT21_21945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_21945 PF12833 Helix-turn-helix domain JHT21_21945 PF00512 His Kinase A (phospho-acceptor) domain JHT21_21945 PF07495 Y_Y_Y domain JHT21_21945 PF07494 Two component regulator propeller JHT21_21945 PF00072 Response regulator receiver domain JHT21_21950 PF07690 Major Facilitator Superfamily JHT21_21955 PF00085 Thioredoxin JHT21_21960 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JHT21_21960 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JHT21_21985 PF07690 Major Facilitator Superfamily JHT21_21990 PF07730 Histidine kinase JHT21_21990 PF05231 MASE1 JHT21_21990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_21995 PF00196 Bacterial regulatory proteins, luxR family JHT21_21995 PF00072 Response regulator receiver domain JHT21_22000 PF07690 Major Facilitator Superfamily JHT21_22005 PF02634 FdhD/NarQ family JHT21_22010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_22010 PF03466 LysR substrate binding domain JHT21_22015 PF00384 Molybdopterin oxidoreductase JHT21_22020 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JHT21_22020 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHT21_22035 PF04143 Sulphur transport JHT21_22045 PF00873 AcrB/AcrD/AcrF family JHT21_22050 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JHT21_22060 PF03477 ATP cone domain JHT21_22060 PF13597 Anaerobic ribonucleoside-triphosphate reductase JHT21_22070 PF01554 MatE JHT21_22075 PF12833 Helix-turn-helix domain JHT21_22080 PF00155 Aminotransferase class I and II JHT21_22085 PF08443 RimK-like ATP-grasp domain JHT21_22085 PF18030 RimK PreATP-grasp domain JHT21_22095 PF04076 Bacterial OB fold (BOF) protein JHT21_22100 PF07685 CobB/CobQ-like glutamine amidotransferase domain JHT21_22110 PF00528 Binding-protein-dependent transport system inner membrane component JHT21_22115 PF00005 ABC transporter JHT21_22115 PF03459 TOBE domain JHT21_22125 PF00563 EAL domain JHT21_22125 PF01590 GAF domain JHT21_22125 PF00990 Diguanylate cyclase, GGDEF domain JHT21_22125 PF00360 Phytochrome region JHT21_22135 PF00990 Diguanylate cyclase, GGDEF domain JHT21_22150 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JHT21_22150 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JHT21_22150 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch JHT21_22155 PF02233 NAD(P) transhydrogenase beta subunit JHT21_22165 PF00072 Response regulator receiver domain JHT21_22165 PF00486 Transcriptional regulatory protein, C terminal JHT21_22180 PF03701 Uncharacterised protein family (UPF0181) JHT21_22185 PF00582 Universal stress protein family JHT21_22195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_22195 PF03466 LysR substrate binding domain JHT21_22210 PF01253 Translation initiation factor SUI1 JHT21_22220 PF07478 D-ala D-ala ligase C-terminus JHT21_22220 PF01820 D-ala D-ala ligase N-terminus JHT21_22230 PF13380 CoA binding domain JHT21_22230 PF00583 Acetyltransferase (GNAT) family JHT21_22230 PF13607 Succinyl-CoA ligase like flavodoxin domain JHT21_22235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_22235 PF03466 LysR substrate binding domain JHT21_22240 PF07715 TonB-dependent Receptor Plug Domain JHT21_22240 PF00593 TonB dependent receptor JHT21_22245 PF16363 GDP-mannose 4,6 dehydratase JHT21_22250 PF13426 PAS domain JHT21_22250 PF08447 PAS fold JHT21_22250 PF08448 PAS fold JHT21_22250 PF00990 Diguanylate cyclase, GGDEF domain JHT21_22250 PF00563 EAL domain JHT21_22250 PF05231 MASE1 JHT21_22255 PF03746 LamB/YcsF family JHT21_22260 PF02682 Carboxyltransferase domain, subdomain C and D JHT21_22265 PF02626 Carboxyltransferase domain, subdomain A and B JHT21_22280 PF00005 ABC transporter JHT21_22285 PF13472 GDSL-like Lipase/Acylhydrolase family JHT21_22290 PF07055 Enoyl reductase FAD binding domain JHT21_22290 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase JHT21_22290 PF12241 Trans-2-enoyl-CoA reductase catalytic region JHT21_22295 PF03707 Bacterial signalling protein N terminal repeat JHT21_22295 PF00563 EAL domain JHT21_22295 PF13188 PAS domain JHT21_22295 PF00990 Diguanylate cyclase, GGDEF domain JHT21_22305 PF01556 DnaJ C terminal domain JHT21_22305 PF00226 DnaJ domain JHT21_22305 PF00684 DnaJ central domain JHT21_22330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JHT21_22330 PF12793 Sugar transport-related sRNA regulator N-term JHT21_22340 PF03061 Thioesterase superfamily JHT21_22355 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) JHT21_22360 PF12262 Bacterial virulence factor lipase N-terminal JHT21_22375 PF03741 Integral membrane protein TerC family JHT21_22380 PF00149 Calcineurin-like phosphoesterase JHT21_22380 PF02872 5'-nucleotidase, C-terminal domain JHT21_22385 PF11398 Protein of unknown function (DUF2813) JHT21_22390 PF06496 Protein of unknown function (DUF1097) JHT21_22395 PF03466 LysR substrate binding domain JHT21_22395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_22400 PF01226 Formate/nitrite transporter JHT21_22405 PF04264 YceI-like domain JHT21_22410 PF01292 Prokaryotic cytochrome b561 JHT21_22425 PF12792 CSS motif domain associated with EAL JHT21_22425 PF00563 EAL domain JHT21_22430 PF00271 Helicase conserved C-terminal domain JHT21_22430 PF00270 DEAD/DEAH box helicase JHT21_22435 PF04336 Acyl carrier protein phosphodiesterase JHT21_22440 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT21_22440 PF00672 HAMP domain JHT21_22445 PF13419 Haloacid dehalogenase-like hydrolase JHT21_22450 PF11849 Domain of unknown function (DUF3369) JHT21_22465 PF00294 pfkB family carbohydrate kinase JHT21_22470 PF01268 Formate--tetrahydrofolate ligase JHT21_22475 PF00483 Nucleotidyl transferase JHT21_22480 PF00704 Glycosyl hydrolases family 18 JHT21_22480 PF06483 Chitinase C JHT21_22485 PF06719 AraC-type transcriptional regulator N-terminus JHT21_22485 PF12833 Helix-turn-helix domain JHT21_22490 PF00465 Iron-containing alcohol dehydrogenase JHT21_22500 PF14532 Sigma-54 interaction domain JHT21_22500 PF02954 Bacterial regulatory protein, Fis family JHT21_22500 PF00072 Response regulator receiver domain JHT21_22505 PF00672 HAMP domain JHT21_22505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_22505 PF00512 His Kinase A (phospho-acceptor) domain JHT21_22515 PF07690 Major Facilitator Superfamily JHT21_22520 PF02887 Pyruvate kinase, alpha/beta domain JHT21_22520 PF00224 Pyruvate kinase, barrel domain JHT21_22525 PF00005 ABC transporter JHT21_22530 PF00528 Binding-protein-dependent transport system inner membrane component JHT21_22535 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHT21_22540 PF00528 Binding-protein-dependent transport system inner membrane component JHT21_22545 PF01590 GAF domain JHT21_22545 PF00990 Diguanylate cyclase, GGDEF domain JHT21_22545 PF00989 PAS fold JHT21_22545 PF00563 EAL domain JHT21_22560 PF00356 Bacterial regulatory proteins, lacI family JHT21_22560 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JHT21_22565 PF00381 PTS HPr component phosphorylation site JHT21_22565 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JHT21_22570 PF00294 pfkB family carbohydrate kinase JHT21_22575 PF02378 Phosphotransferase system, EIIC JHT21_22575 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JHT21_22585 PF00873 AcrB/AcrD/AcrF family JHT21_22605 PF08669 Glycine cleavage T-protein C-terminal barrel domain JHT21_22605 PF01571 Aminomethyltransferase folate-binding domain JHT21_22615 PF00464 Serine hydroxymethyltransferase JHT21_22620 PF01597 Glycine cleavage H-protein JHT21_22625 PF02347 Glycine cleavage system P-protein JHT21_22630 PF02810 SEC-C motif JHT21_22630 PF07517 SecA DEAD-like domain JHT21_22630 PF01043 SecA preprotein cross-linking domain JHT21_22630 PF07516 SecA Wing and Scaffold domain JHT21_22715 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) JHT21_22725 PF01610 Transposase JHT21_22725 PF13542 Helix-turn-helix domain of transposase family ISL3 JHT21_22725 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 JHT21_22745 PF03981 Ubiquinol-cytochrome C chaperone JHT21_22745 PF13099 Domain of unknown function (DUF3944) JHT21_22790 PF01039 Carboxyl transferase domain JHT21_22790 PF17848 Acetyl-coA carboxylase zinc finger domain JHT21_22795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_22795 PF03466 LysR substrate binding domain JHT21_22800 PF07733 Bacterial DNA polymerase III alpha NTPase domain JHT21_22800 PF00929 Exonuclease JHT21_22800 PF11490 DNA polymerase III polC-type N-terminus II JHT21_22800 PF14579 Helix-hairpin-helix motif JHT21_22800 PF02811 PHP domain JHT21_22800 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JHT21_22810 PF00664 ABC transporter transmembrane region JHT21_22810 PF00005 ABC transporter JHT21_22830 PF02253 Phospholipase A1 JHT21_22840 PF09278 MerR, DNA binding JHT21_22840 PF00376 MerR family regulatory protein JHT21_22845 PF01327 Polypeptide deformylase JHT21_22875 PF00571 CBS domain JHT21_22875 PF01769 Divalent cation transporter JHT21_22875 PF03448 MgtE intracellular N domain JHT21_22895 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JHT21_22900 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JHT21_22910 PF01757 Acyltransferase family JHT21_22920 PF09722 Protein of unknown function (DUF2384) JHT21_22925 PF00141 Peroxidase JHT21_22930 PF01645 Conserved region in glutamate synthase JHT21_22930 PF13187 4Fe-4S dicluster domain JHT21_22940 PF00072 Response regulator receiver domain JHT21_22940 PF12431 Transcriptional regulator JHT21_22945 PF17203 Single cache domain 3 JHT21_22945 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JHT21_22945 PF00989 PAS fold JHT21_22945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_22950 PF00939 Sodium:sulfate symporter transmembrane region JHT21_22955 PF00171 Aldehyde dehydrogenase family JHT21_22975 PF00892 EamA-like transporter family JHT21_22980 PF00893 Small Multidrug Resistance protein JHT21_22985 PF03413 Peptidase propeptide and YPEB domain JHT21_22985 PF07504 Fungalysin/Thermolysin Propeptide Motif JHT21_22985 PF01447 Thermolysin metallopeptidase, catalytic domain JHT21_22985 PF02868 Thermolysin metallopeptidase, alpha-helical domain JHT21_22985 PF04151 Bacterial pre-peptidase C-terminal domain JHT21_22995 PF01569 PAP2 superfamily JHT21_23005 PF00892 EamA-like transporter family JHT21_23020 PF00072 Response regulator receiver domain JHT21_23020 PF01584 CheW-like domain JHT21_23040 PF00196 Bacterial regulatory proteins, luxR family JHT21_23040 PF00072 Response regulator receiver domain JHT21_23050 PF00990 Diguanylate cyclase, GGDEF domain JHT21_23055 PF00196 Bacterial regulatory proteins, luxR family JHT21_23055 PF00072 Response regulator receiver domain JHT21_23060 PF13188 PAS domain JHT21_23060 PF03707 Bacterial signalling protein N terminal repeat JHT21_23060 PF00990 Diguanylate cyclase, GGDEF domain JHT21_23060 PF00563 EAL domain JHT21_23065 PF09456 RcsC Alpha-Beta-Loop (ABL) JHT21_23065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_23065 PF00512 His Kinase A (phospho-acceptor) domain JHT21_23065 PF00072 Response regulator receiver domain JHT21_23080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_23080 PF03466 LysR substrate binding domain JHT21_23090 PF00691 OmpA family JHT21_23090 PF05736 OprF membrane domain JHT21_23125 PF00437 Type II/IV secretion system protein JHT21_23140 PF04972 BON domain JHT21_23140 PF00263 Bacterial type II and III secretion system protein JHT21_23140 PF13629 Pilus formation protein N terminal region JHT21_23160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_23160 PF03466 LysR substrate binding domain JHT21_23165 PF12833 Helix-turn-helix domain JHT21_23175 PF01752 Collagenase JHT21_23175 PF08453 Peptidase family M9 N-terminal JHT21_23175 PF04151 Bacterial pre-peptidase C-terminal domain JHT21_23185 PF01926 50S ribosome-binding GTPase JHT21_23190 PF00155 Aminotransferase class I and II JHT21_23195 PF00072 Response regulator receiver domain JHT21_23195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_23205 PF00814 Glycoprotease family JHT21_23205 PF00583 Acetyltransferase (GNAT) family JHT21_23215 PF03606 C4-dicarboxylate anaerobic carrier JHT21_23220 PF04011 LemA family JHT21_23225 PF01435 Peptidase family M48 JHT21_23240 PF08774 VRR-NUC domain JHT21_23240 PF18081 Fanconi anemia-associated nuclease SAP domain JHT21_23250 PF13186 Iron-sulfur cluster-binding domain JHT21_23250 PF04055 Radical SAM superfamily JHT21_23265 PF04076 Bacterial OB fold (BOF) protein JHT21_23270 PF00781 Diacylglycerol kinase catalytic domain JHT21_23275 PF03466 LysR substrate binding domain JHT21_23275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_23280 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JHT21_23295 PF00092 von Willebrand factor type A domain JHT21_23310 PF07726 ATPase family associated with various cellular activities (AAA) JHT21_23310 PF17863 AAA lid domain JHT21_23315 PF13186 Iron-sulfur cluster-binding domain JHT21_23315 PF04055 Radical SAM superfamily JHT21_23320 PF00884 Sulfatase JHT21_23325 PF03466 LysR substrate binding domain JHT21_23325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_23335 PF00884 Sulfatase JHT21_23340 PF16385 Domain of unknown function JHT21_23340 PF00884 Sulfatase JHT21_23345 PF00486 Transcriptional regulatory protein, C terminal JHT21_23345 PF00072 Response regulator receiver domain JHT21_23360 PF00672 HAMP domain JHT21_23360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT21_23360 PF01627 Hpt domain JHT21_23360 PF00512 His Kinase A (phospho-acceptor) domain JHT21_23360 PF00072 Response regulator receiver domain JHT21_23365 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JHT21_23370 PF02142 MGS-like domain JHT21_23375 PF13361 UvrD-like helicase C-terminal domain JHT21_23375 PF12462 DNA helicase IV / RNA helicase N terminal JHT21_23375 PF00580 UvrD/REP helicase N-terminal domain JHT21_23380 PF12805 FUSC-like inner membrane protein yccS JHT21_23410 PF07715 TonB-dependent Receptor Plug Domain JHT21_23410 PF00593 TonB dependent receptor JHT21_23415 PF12833 Helix-turn-helix domain JHT21_23420 PF13411 MerR HTH family regulatory protein JHT21_23425 PF00005 ABC transporter JHT21_23430 PF01032 FecCD transport family JHT21_23435 PF01032 FecCD transport family JHT21_23440 PF01497 Periplasmic binding protein JHT21_23460 PF04314 Copper chaperone PCu(A)C JHT21_23465 PF00012 Hsp70 protein JHT21_23480 PF00676 Dehydrogenase E1 component JHT21_23485 PF02779 Transketolase, pyrimidine binding domain JHT21_23485 PF02780 Transketolase, C-terminal domain JHT21_23490 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JHT21_23490 PF00364 Biotin-requiring enzyme JHT21_23490 PF02817 e3 binding domain JHT21_23500 PF00043 Glutathione S-transferase, C-terminal domain JHT21_23500 PF02798 Glutathione S-transferase, N-terminal domain JHT21_23505 PF03466 LysR substrate binding domain JHT21_23505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_23515 PF00528 Binding-protein-dependent transport system inner membrane component JHT21_23520 PF00528 Binding-protein-dependent transport system inner membrane component JHT21_23525 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHT21_23530 PF00005 ABC transporter JHT21_23535 PF08031 Berberine and berberine like JHT21_23535 PF01565 FAD binding domain JHT21_23540 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JHT21_23545 PF01040 UbiA prenyltransferase family JHT21_23555 PF00510 Cytochrome c oxidase subunit III JHT21_23560 PF00115 Cytochrome C and Quinol oxidase polypeptide I JHT21_23565 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JHT21_23565 PF06481 COX Aromatic Rich Motif JHT21_23575 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JHT21_23575 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JHT21_23580 PF00378 Enoyl-CoA hydratase/isomerase JHT21_23585 PF00378 Enoyl-CoA hydratase/isomerase JHT21_23590 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JHT21_23590 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JHT21_23590 PF02770 Acyl-CoA dehydrogenase, middle domain JHT21_23595 PF00171 Aldehyde dehydrogenase family JHT21_23600 PF00108 Thiolase, N-terminal domain JHT21_23600 PF02803 Thiolase, C-terminal domain JHT21_23605 PF09278 MerR, DNA binding JHT21_23605 PF00376 MerR family regulatory protein JHT21_23610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JHT21_23610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JHT21_23610 PF02770 Acyl-CoA dehydrogenase, middle domain JHT21_23615 PF01039 Carboxyl transferase domain JHT21_23620 PF00378 Enoyl-CoA hydratase/isomerase JHT21_23625 PF00682 HMGL-like JHT21_23630 PF10063 Uncharacterized integral membrane protein (DUF2301) JHT21_23640 PF08447 PAS fold JHT21_23640 PF13426 PAS domain JHT21_23640 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT21_23645 PF00871 Acetokinase family JHT21_23650 PF13426 PAS domain JHT21_23650 PF00990 Diguanylate cyclase, GGDEF domain JHT21_23650 PF00563 EAL domain JHT21_23655 PF03880 DbpA RNA binding domain JHT21_23655 PF00270 DEAD/DEAH box helicase JHT21_23655 PF00271 Helicase conserved C-terminal domain JHT21_23660 PF08206 Ribonuclease B OB domain JHT21_23660 PF00773 RNB domain JHT21_23660 PF00575 S1 RNA binding domain JHT21_23665 PF12833 Helix-turn-helix domain JHT21_23675 PF12849 PBP superfamily domain JHT21_23700 PF02368 Bacterial Ig-like domain (group 2) JHT21_23700 PF11999 Protein of unknown function (DUF3494) JHT21_23720 PF13737 Transposase DDE domain JHT21_23730 PF07690 Major Facilitator Superfamily JHT21_23735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT21_23735 PF03466 LysR substrate binding domain JHT21_23770 PF02796 Helix-turn-helix domain of resolvase JHT21_23770 PF00239 Resolvase, N terminal domain JHT21_23845 PF03230 Antirestriction protein JHT21_23870 PF01751 Toprim domain JHT21_23870 PF01131 DNA topoisomerase JHT21_23930 PF01464 Transglycosylase SLT domain JHT21_23945 PF01848 Hok/gef family JHT21_23985 PF00437 Type II/IV secretion system protein JHT21_24015 PF03743 Bacterial conjugation TrbI-like protein JHT21_24030 PF04335 VirB8 protein JHT21_24040 PF00437 Type II/IV secretion system protein JHT21_24050 PF03135 CagE, TrbE, VirB family, component of type IV transporter system JHT21_24060 PF04956 TrbC/VIRB2 family