locus-tag class description JHT19_00005 PF00308 Bacterial dnaA protein JHT19_00005 PF08299 Bacterial dnaA protein helix-turn-helix JHT19_00005 PF11638 DnaA N-terminal domain JHT19_00010 PF00712 DNA polymerase III beta subunit, N-terminal domain JHT19_00010 PF02767 DNA polymerase III beta subunit, central domain JHT19_00010 PF02768 DNA polymerase III beta subunit, C-terminal domain JHT19_00015 PF02463 RecF/RecN/SMC N terminal domain JHT19_00020 PF00204 DNA gyrase B JHT19_00020 PF00986 DNA gyrase B subunit, carboxyl terminus JHT19_00020 PF18053 DNA gyrase B subunit insert domain JHT19_00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_00020 PF01751 Toprim domain JHT19_00030 PF00011 Hsp20/alpha crystallin family JHT19_00035 PF00155 Aminotransferase class I and II JHT19_00040 PF00128 Alpha amylase, catalytic domain JHT19_00045 PF05746 DALR anticodon binding domain JHT19_00045 PF02092 Glycyl-tRNA synthetase beta subunit JHT19_00050 PF02091 Glycyl-tRNA synthetase alpha subunit JHT19_00055 PF01169 Uncharacterized protein family UPF0016 JHT19_00065 PF01206 Sulfurtransferase TusA JHT19_00075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_00075 PF03466 LysR substrate binding domain JHT19_00080 PF08240 Alcohol dehydrogenase GroES-like domain JHT19_00080 PF00107 Zinc-binding dehydrogenase JHT19_00085 PF02803 Thiolase, C-terminal domain JHT19_00085 PF00108 Thiolase, N-terminal domain JHT19_00090 PF00378 Enoyl-CoA hydratase/isomerase JHT19_00090 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JHT19_00090 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JHT19_00095 PF09186 Domain of unknown function (DUF1949) JHT19_00095 PF01205 Uncharacterized protein family UPF0029 JHT19_00100 PF02386 Cation transport protein JHT19_00105 PF12724 Flavodoxin domain JHT19_00140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_00140 PF03466 LysR substrate binding domain JHT19_00145 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JHT19_00145 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JHT19_00150 PF04380 Membrane fusogenic activity JHT19_00155 PF00873 AcrB/AcrD/AcrF family JHT19_00160 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JHT19_00165 PF00440 Bacterial regulatory proteins, tetR family JHT19_00165 PF16295 Tetracyclin repressor-like, C-terminal domain JHT19_00170 PF00580 UvrD/REP helicase N-terminal domain JHT19_00170 PF13361 UvrD-like helicase C-terminal domain JHT19_00175 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JHT19_00205 PF13419 Haloacid dehalogenase-like hydrolase JHT19_00210 PF00005 ABC transporter JHT19_00210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JHT19_00215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JHT19_00220 PF00528 Binding-protein-dependent transport system inner membrane component JHT19_00225 PF00528 Binding-protein-dependent transport system inner membrane component JHT19_00225 PF12911 N-terminal TM domain of oligopeptide transport permease C JHT19_00255 PF00069 Protein kinase domain JHT19_00265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_00265 PF03466 LysR substrate binding domain JHT19_00270 PF00893 Small Multidrug Resistance protein JHT19_00275 PF00893 Small Multidrug Resistance protein JHT19_00285 PF01202 Shikimate kinase JHT19_00290 PF02447 GntP family permease JHT19_00295 PF01081 KDPG and KHG aldolase JHT19_00300 PF01048 Phosphorylase superfamily JHT19_00305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_00305 PF03466 LysR substrate binding domain JHT19_00310 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHT19_00310 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JHT19_00315 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ JHT19_00320 PF01432 Peptidase family M3 JHT19_00325 PF01037 Lrp/AsnC ligand binding domain JHT19_00335 PF04445 Putative SAM-dependent methyltransferase JHT19_00345 PF00892 EamA-like transporter family JHT19_00350 PF00582 Universal stress protein family JHT19_00355 PF00210 Ferritin-like domain JHT19_00360 PF10625 Universal stress protein B (UspB) JHT19_00370 PF00158 Sigma-54 interaction domain JHT19_00370 PF01590 GAF domain JHT19_00370 PF02954 Bacterial regulatory protein, Fis family JHT19_00375 PF04972 BON domain JHT19_00425 PF01594 AI-2E family transporter JHT19_00430 PF00990 Diguanylate cyclase, GGDEF domain JHT19_00430 PF03707 Bacterial signalling protein N terminal repeat JHT19_00430 PF00563 EAL domain JHT19_00440 PF02646 RmuC family JHT19_00445 PF01209 ubiE/COQ5 methyltransferase family JHT19_00450 PF02036 SCP-2 sterol transfer family JHT19_00455 PF03109 ABC1 family JHT19_00460 PF02416 mttA/Hcf106 family JHT19_00465 PF02416 mttA/Hcf106 family JHT19_00470 PF00902 Sec-independent protein translocase protein (TatC) JHT19_00475 PF01026 TatD related DNase JHT19_00480 PF00490 Delta-aminolevulinic acid dehydratase JHT19_00495 PF01367 5'-3' exonuclease, C-terminal SAM fold JHT19_00495 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JHT19_00495 PF00476 DNA polymerase family A JHT19_00495 PF01612 3'-5' exonuclease JHT19_00500 PF01926 50S ribosome-binding GTPase JHT19_00505 PF00034 Cytochrome c JHT19_00515 PF04220 Der GTPase activator (YihI) JHT19_00520 PF10675 Protein of unknown function (DUF2489) JHT19_00525 PF04055 Radical SAM superfamily JHT19_00525 PF06969 HemN C-terminal domain JHT19_00530 PF00962 Adenosine/AMP deaminase JHT19_00535 PF00990 Diguanylate cyclase, GGDEF domain JHT19_00535 PF00563 EAL domain JHT19_00535 PF03707 Bacterial signalling protein N terminal repeat JHT19_00540 PF02954 Bacterial regulatory protein, Fis family JHT19_00540 PF00072 Response regulator receiver domain JHT19_00540 PF00158 Sigma-54 interaction domain JHT19_00545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_00545 PF00512 His Kinase A (phospho-acceptor) domain JHT19_00545 PF00989 PAS fold JHT19_00555 PF03951 Glutamine synthetase, beta-Grasp domain JHT19_00555 PF00120 Glutamine synthetase, catalytic domain JHT19_00560 PF00009 Elongation factor Tu GTP binding domain JHT19_00560 PF03144 Elongation factor Tu domain 2 JHT19_00560 PF00679 Elongation factor G C-terminus JHT19_00575 PF03631 Virulence factor BrkB JHT19_00580 PF02580 D-Tyr-tRNA(Tyr) deacylase JHT19_00585 PF00583 Acetyltransferase (GNAT) family JHT19_00585 PF09500 Putative thioesterase (yiiD_Cterm) JHT19_00595 PF01293 Phosphoenolpyruvate carboxykinase JHT19_00600 PF01430 Hsp33 protein JHT19_00605 PF01479 S4 domain JHT19_00610 PF11356 Type II secretion system protein C JHT19_00615 PF00263 Bacterial type II and III secretion system protein JHT19_00615 PF03958 Bacterial type II/III secretion system short domain JHT19_00620 PF00437 Type II/IV secretion system protein JHT19_00625 PF00482 Type II secretion system (T2SS), protein F JHT19_00630 PF07963 Prokaryotic N-terminal methylation motif JHT19_00630 PF08334 Type II secretion system (T2SS), protein G JHT19_00635 PF12019 Type II transport protein GspH JHT19_00640 PF07963 Prokaryotic N-terminal methylation motif JHT19_00640 PF02501 Type II secretion system (T2SS), protein I JHT19_00645 PF07963 Prokaryotic N-terminal methylation motif JHT19_00645 PF11612 Type II secretion system (T2SS), protein J JHT19_00650 PF03934 Type II secretion system (T2SS), protein K JHT19_00655 PF12693 GspL periplasmic domain JHT19_00655 PF05134 Type II secretion system (T2SS), protein L JHT19_00660 PF04612 Type II secretion system (T2SS), protein M JHT19_00670 PF00459 Inositol monophosphatase family JHT19_00675 PF00293 NUDIX domain JHT19_00680 PF01521 Iron-sulphur cluster biosynthesis JHT19_00680 PF01106 NifU-like domain JHT19_00685 PF00156 Phosphoribosyl transferase domain JHT19_00690 PF00561 alpha/beta hydrolase fold JHT19_00700 PF00575 S1 RNA binding domain JHT19_00700 PF17674 HHH domain JHT19_00700 PF09371 Tex-like protein N-terminal domain JHT19_00700 PF16921 Tex protein YqgF-like domain JHT19_00710 PF03449 Transcription elongation factor, N-terminal JHT19_00710 PF01272 Transcription elongation factor, GreA/GreB, C-term JHT19_00720 PF00072 Response regulator receiver domain JHT19_00720 PF00486 Transcriptional regulatory protein, C terminal JHT19_00725 PF00672 HAMP domain JHT19_00725 PF00512 His Kinase A (phospho-acceptor) domain JHT19_00725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_00730 PF00860 Permease family JHT19_00740 PF00588 SpoU rRNA Methylase family JHT19_00740 PF12105 SpoU, rRNA methylase, C-terminal JHT19_00745 PF04607 Region found in RelA / SpoT proteins JHT19_00745 PF02824 TGS domain JHT19_00745 PF13291 ACT domain JHT19_00750 PF01192 RNA polymerase Rpb6 JHT19_00755 PF00625 Guanylate kinase JHT19_00770 PF02472 Biopolymer transport protein ExbD/TolR JHT19_00775 PF01618 MotA/TolQ/ExbB proton channel family JHT19_00790 PF00593 TonB dependent receptor JHT19_00790 PF07715 TonB-dependent Receptor Plug Domain JHT19_00805 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JHT19_00810 PF00005 ABC transporter JHT19_00810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JHT19_00815 PF00005 ABC transporter JHT19_00815 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JHT19_00825 PF08340 Domain of unknown function (DUF1732) JHT19_00825 PF03755 YicC-like family, N-terminal region JHT19_00830 PF01138 3' exoribonuclease family, domain 1 JHT19_00830 PF03725 3' exoribonuclease family, domain 2 JHT19_00835 PF00156 Phosphoribosyl transferase domain JHT19_00845 PF00440 Bacterial regulatory proteins, tetR family JHT19_00850 PF02441 Flavoprotein JHT19_00850 PF04127 DNA / pantothenate metabolism flavoprotein JHT19_00855 PF00672 HAMP domain JHT19_00855 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT19_00855 PF17200 Single Cache domain 2 JHT19_00860 PF04002 RadC-like JAB domain JHT19_00865 PF00830 Ribosomal L28 family JHT19_00870 PF00471 Ribosomal protein L33 JHT19_00880 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JHT19_00880 PF06827 Zinc finger found in FPG and IleRS JHT19_00880 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JHT19_00885 PF05686 Glycosyl transferase family 90 JHT19_00890 PF01467 Cytidylyltransferase-like JHT19_00895 PF00534 Glycosyl transferases group 1 JHT19_00895 PF13439 Glycosyltransferase Family 4 JHT19_00900 PF00535 Glycosyl transferase family 2 JHT19_00905 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JHT19_00910 PF01219 Prokaryotic diacylglycerol kinase JHT19_00920 PF16363 GDP-mannose 4,6 dehydratase JHT19_00925 PF00483 Nucleotidyl transferase JHT19_00930 PF05523 WxcM-like, C-terminal JHT19_00935 PF00132 Bacterial transferase hexapeptide (six repeats) JHT19_00940 PF01575 MaoC like domain JHT19_00945 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JHT19_00960 PF13439 Glycosyltransferase Family 4 JHT19_00960 PF00534 Glycosyl transferases group 1 JHT19_00970 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) JHT19_00975 PF01075 Glycosyltransferase family 9 (heptosyltransferase) JHT19_00980 PF03279 Bacterial lipid A biosynthesis acyltransferase JHT19_00985 PF01370 NAD dependent epimerase/dehydratase family JHT19_00990 PF06082 Exopolysaccharide biosynthesis protein YbjH JHT19_01035 PF02719 Polysaccharide biosynthesis protein JHT19_01035 PF08485 Polysaccharide biosynthesis protein C-terminal JHT19_01040 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JHT19_01045 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family JHT19_01050 PF00132 Bacterial transferase hexapeptide (six repeats) JHT19_01050 PF12464 Maltose acetyltransferase JHT19_01055 PF00535 Glycosyl transferase family 2 JHT19_01070 PF00535 Glycosyl transferase family 2 JHT19_01075 PF13439 Glycosyltransferase Family 4 JHT19_01090 PF01370 NAD dependent epimerase/dehydratase family JHT19_01095 PF02397 Bacterial sugar transferase JHT19_01100 PF02719 Polysaccharide biosynthesis protein JHT19_01105 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JHT19_01105 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JHT19_01105 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JHT19_01110 PF00483 Nucleotidyl transferase JHT19_01115 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JHT19_01115 PF00753 Metallo-beta-lactamase superfamily JHT19_01115 PF10996 Beta-Casp domain JHT19_01120 PF00121 Triosephosphate isomerase JHT19_01140 PF00455 DeoR C terminal sensor domain JHT19_01140 PF08220 DeoR-like helix-turn-helix domain JHT19_01145 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded JHT19_01150 PF06005 Cell division protein ZapB JHT19_01155 PF03737 Aldolase/RraA JHT19_01160 PF01040 UbiA prenyltransferase family JHT19_01190 PF04002 RadC-like JAB domain JHT19_01205 PF00004 ATPase family associated with various cellular activities (AAA) JHT19_01205 PF07724 AAA domain (Cdc48 subfamily) JHT19_01210 PF00227 Proteasome subunit JHT19_01220 PF00356 Bacterial regulatory proteins, lacI family JHT19_01230 PF01197 Ribosomal protein L31 JHT19_01235 PF00338 Ribosomal protein S10p/S20e JHT19_01240 PF00297 Ribosomal protein L3 JHT19_01245 PF00573 Ribosomal protein L4/L1 family JHT19_01250 PF00276 Ribosomal protein L23 JHT19_01255 PF00181 Ribosomal Proteins L2, RNA binding domain JHT19_01255 PF03947 Ribosomal Proteins L2, C-terminal domain JHT19_01260 PF00203 Ribosomal protein S19 JHT19_01265 PF00237 Ribosomal protein L22p/L17e JHT19_01270 PF07650 KH domain JHT19_01270 PF00189 Ribosomal protein S3, C-terminal domain JHT19_01275 PF00252 Ribosomal protein L16p/L10e JHT19_01280 PF00831 Ribosomal L29 protein JHT19_01285 PF00366 Ribosomal protein S17 JHT19_01290 PF00238 Ribosomal protein L14p/L23e JHT19_01295 PF00467 KOW motif JHT19_01295 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JHT19_01300 PF00281 Ribosomal protein L5 JHT19_01300 PF00673 ribosomal L5P family C-terminus JHT19_01305 PF00253 Ribosomal protein S14p/S29e JHT19_01310 PF00410 Ribosomal protein S8 JHT19_01315 PF00347 Ribosomal protein L6 JHT19_01320 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JHT19_01325 PF00333 Ribosomal protein S5, N-terminal domain JHT19_01325 PF03719 Ribosomal protein S5, C-terminal domain JHT19_01330 PF00327 Ribosomal protein L30p/L7e JHT19_01335 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JHT19_01340 PF00344 SecY translocase JHT19_01345 PF00444 Ribosomal protein L36 JHT19_01350 PF00416 Ribosomal protein S13/S18 JHT19_01355 PF00411 Ribosomal protein S11 JHT19_01360 PF00163 Ribosomal protein S4/S9 N-terminal domain JHT19_01360 PF01479 S4 domain JHT19_01365 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JHT19_01365 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JHT19_01365 PF01000 RNA polymerase Rpb3/RpoA insert domain JHT19_01370 PF01196 Ribosomal protein L17 JHT19_01380 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JHT19_01380 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JHT19_01390 PF13673 Acetyltransferase (GNAT) domain JHT19_01395 PF03880 DbpA RNA binding domain JHT19_01395 PF00270 DEAD/DEAH box helicase JHT19_01395 PF00271 Helicase conserved C-terminal domain JHT19_01405 PF02872 5'-nucleotidase, C-terminal domain JHT19_01405 PF00149 Calcineurin-like phosphoesterase JHT19_01410 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JHT19_01410 PF10414 Sirohaem synthase dimerisation region JHT19_01410 PF14824 Sirohaem biosynthesis protein central JHT19_01415 PF01507 Phosphoadenosine phosphosulfate reductase family JHT19_01420 PF00009 Elongation factor Tu GTP binding domain JHT19_01425 PF02080 TrkA-C domain JHT19_01425 PF03600 Citrate transporter JHT19_01450 PF00005 ABC transporter JHT19_01460 PF10795 Protein of unknown function (DUF2607) JHT19_01465 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) JHT19_01470 PF06526 Protein of unknown function (DUF1107) JHT19_01475 PF01625 Peptide methionine sulfoxide reductase JHT19_01490 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like JHT19_01500 PF00719 Inorganic pyrophosphatase JHT19_01505 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain JHT19_01510 PF01225 Mur ligase family, catalytic domain JHT19_01510 PF08245 Mur ligase middle domain JHT19_01510 PF02875 Mur ligase family, glutamate ligase domain JHT19_01515 PF02441 Flavoprotein JHT19_01525 PF00528 Binding-protein-dependent transport system inner membrane component JHT19_01530 PF00005 ABC transporter JHT19_01545 PF16868 NMT1-like family JHT19_01550 PF02863 Arginine repressor, C-terminal domain JHT19_01550 PF01316 Arginine repressor, DNA binding domain JHT19_01555 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JHT19_01555 PF00056 lactate/malate dehydrogenase, NAD binding domain JHT19_01565 PF00348 Polyprenyl synthetase JHT19_01570 PF00829 Ribosomal prokaryotic L21 protein JHT19_01575 PF01016 Ribosomal L27 protein JHT19_01580 PF01018 GTP1/OBG JHT19_01580 PF01926 50S ribosome-binding GTPase JHT19_01585 PF06738 Putative threonine/serine exporter JHT19_01590 PF12821 Threonine/Serine exporter, ThrE JHT19_01595 PF00186 Dihydrofolate reductase JHT19_01600 PF00149 Calcineurin-like phosphoesterase JHT19_01605 PF04379 ApaG domain JHT19_01610 PF00398 Ribosomal RNA adenine dimethylase JHT19_01615 PF04166 Pyridoxal phosphate biosynthetic protein PdxA JHT19_01620 PF09312 SurA N-terminal domain JHT19_01625 PF03968 OstA-like protein JHT19_01625 PF04453 LPS transport system D JHT19_01630 PF00226 DnaJ domain JHT19_01630 PF05099 Tellurite resistance protein TerB JHT19_01640 PF00694 Aconitase C-terminal domain JHT19_01645 PF00330 Aconitase family (aconitate hydratase) JHT19_01650 PF00180 Isocitrate/isopropylmalate dehydrogenase JHT19_01655 PF08502 LeuA allosteric (dimerisation) domain JHT19_01655 PF00682 HMGL-like JHT19_01665 PF01569 PAP2 superfamily JHT19_01675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_01675 PF03466 LysR substrate binding domain JHT19_01680 PF00501 AMP-binding enzyme JHT19_01685 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JHT19_01685 PF00205 Thiamine pyrophosphate enzyme, central domain JHT19_01685 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JHT19_01690 PF10369 Small subunit of acetolactate synthase JHT19_01705 PF00224 Pyruvate kinase, barrel domain JHT19_01705 PF02887 Pyruvate kinase, alpha/beta domain JHT19_01710 PF00455 DeoR C terminal sensor domain JHT19_01710 PF08220 DeoR-like helix-turn-helix domain JHT19_01715 PF01380 SIS domain JHT19_01725 PF00072 Response regulator receiver domain JHT19_01725 PF00486 Transcriptional regulatory protein, C terminal JHT19_01730 PF00672 HAMP domain JHT19_01730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_01730 PF00512 His Kinase A (phospho-acceptor) domain JHT19_01735 PF13419 Haloacid dehalogenase-like hydrolase JHT19_01740 PF05068 Mannitol repressor JHT19_01745 PF01232 Mannitol dehydrogenase Rossmann domain JHT19_01745 PF08125 Mannitol dehydrogenase C-terminal domain JHT19_01750 PF02378 Phosphotransferase system, EIIC JHT19_01750 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JHT19_01750 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JHT19_01780 PF03180 NLPA lipoprotein JHT19_01790 PF06803 Protein of unknown function (DUF1232) JHT19_01845 PF02899 Phage integrase, N-terminal SAM-like domain JHT19_01845 PF00589 Phage integrase family JHT19_01895 PF00293 NUDIX domain JHT19_01905 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JHT19_01905 PF00529 HlyD membrane-fusion protein of T1SS JHT19_01935 PF01420 Type I restriction modification DNA specificity domain JHT19_01940 PF12161 HsdM N-terminal domain JHT19_01940 PF02384 N-6 DNA Methylase JHT19_01960 PF01555 DNA methylase JHT19_01970 PF08463 EcoEI R protein C-terminal JHT19_01970 PF00271 Helicase conserved C-terminal domain JHT19_01970 PF04851 Type III restriction enzyme, res subunit JHT19_01970 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) JHT19_02010 PF04546 Sigma-70, non-essential region JHT19_02010 PF00140 Sigma-70 factor, region 1.2 JHT19_02010 PF04542 Sigma-70 region 2 JHT19_02010 PF04539 Sigma-70 region 3 JHT19_02010 PF04545 Sigma-70, region 4 JHT19_02010 PF03979 Sigma-70 factor, region 1.1 JHT19_02015 PF10410 DnaB-helicase binding domain of primase JHT19_02015 PF08275 DNA primase catalytic core, N-terminal domain JHT19_02015 PF01807 CHC2 zinc finger JHT19_02015 PF08278 DNA primase DnaG DnaB-binding JHT19_02020 PF09424 Yqey-like protein JHT19_02025 PF01165 Ribosomal protein S21 JHT19_02030 PF00814 Glycoprotease family JHT19_02035 PF12697 Alpha/beta hydrolase family JHT19_02045 PF02152 Dihydroneopterin aldolase JHT19_02055 PF02673 Bacitracin resistance protein BacA JHT19_02060 PF01966 HD domain JHT19_02060 PF01743 Poly A polymerase head domain JHT19_02060 PF12627 Probable RNA and SrmB- binding site of polymerase A JHT19_02065 PF13401 AAA domain JHT19_02065 PF01471 Putative peptidoglycan binding domain JHT19_02075 PF08239 Bacterial SH3 domain JHT19_02080 PF01384 Phosphate transporter family JHT19_02085 PF01865 Protein of unknown function DUF47 JHT19_02090 PF01928 CYTH domain JHT19_02100 PF00672 HAMP domain JHT19_02100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT19_02105 PF03710 Glutamate-ammonia ligase adenylyltransferase JHT19_02105 PF08335 GlnD PII-uridylyltransferase JHT19_02110 PF01467 Cytidylyltransferase-like JHT19_02110 PF00294 pfkB family carbohydrate kinase JHT19_02115 PF02321 Outer membrane efflux protein JHT19_02120 PF00293 NUDIX domain JHT19_02125 PF06853 Protein of unknown function (DUF1249) JHT19_02130 PF00149 Calcineurin-like phosphoesterase JHT19_02135 PF05728 Uncharacterised protein family (UPF0227) JHT19_02140 PF00986 DNA gyrase B subunit, carboxyl terminus JHT19_02140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_02140 PF01751 Toprim domain JHT19_02140 PF00204 DNA gyrase B JHT19_02145 PF03989 DNA gyrase C-terminal domain, beta-propeller JHT19_02145 PF00521 DNA gyrase/topoisomerase IV, subunit A JHT19_02150 PF13180 PDZ domain JHT19_02155 PF00595 PDZ domain JHT19_02160 PF06295 Protein of unknown function (DUF1043) JHT19_02165 PF03969 AFG1-like ATPase JHT19_02170 PF00572 Ribosomal protein L13 JHT19_02175 PF00380 Ribosomal protein S9/S16 JHT19_02180 PF00355 Rieske [2Fe-2S] domain JHT19_02180 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal JHT19_02185 PF00032 Cytochrome b(C-terminal)/b6/petD JHT19_02185 PF00033 Cytochrome b/b6/petB JHT19_02190 PF02167 Cytochrome C1 family JHT19_02195 PF00043 Glutathione S-transferase, C-terminal domain JHT19_02195 PF02798 Glutathione S-transferase, N-terminal domain JHT19_02200 PF04386 Stringent starvation protein B JHT19_02205 PF04972 BON domain JHT19_02210 PF13580 SIS domain JHT19_02215 PF02021 Uncharacterised protein family UPF0102 JHT19_02220 PF04348 LppC putative lipoprotein JHT19_02225 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JHT19_02235 PF01795 MraW methylase family JHT19_02240 PF04999 Cell division protein FtsL JHT19_02245 PF00905 Penicillin binding protein transpeptidase domain JHT19_02245 PF03717 Penicillin-binding Protein dimerisation domain JHT19_02250 PF02875 Mur ligase family, glutamate ligase domain JHT19_02250 PF01225 Mur ligase family, catalytic domain JHT19_02250 PF08245 Mur ligase middle domain JHT19_02255 PF01225 Mur ligase family, catalytic domain JHT19_02255 PF02875 Mur ligase family, glutamate ligase domain JHT19_02255 PF08245 Mur ligase middle domain JHT19_02260 PF00953 Glycosyl transferase family 4 JHT19_02260 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 JHT19_02265 PF02875 Mur ligase family, glutamate ligase domain JHT19_02265 PF08245 Mur ligase middle domain JHT19_02270 PF01098 Cell cycle protein JHT19_02275 PF04101 Glycosyltransferase family 28 C-terminal domain JHT19_02275 PF03033 Glycosyltransferase family 28 N-terminal domain JHT19_02280 PF08245 Mur ligase middle domain JHT19_02280 PF01225 Mur ligase family, catalytic domain JHT19_02280 PF02875 Mur ligase family, glutamate ligase domain JHT19_02285 PF08478 POTRA domain, FtsQ-type JHT19_02285 PF03799 Cell division protein FtsQ JHT19_02295 PF00091 Tubulin/FtsZ family, GTPase domain JHT19_02295 PF12327 FtsZ family, C-terminal domain JHT19_02300 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase JHT19_02310 PF01043 SecA preprotein cross-linking domain JHT19_02310 PF07517 SecA DEAD-like domain JHT19_02310 PF02810 SEC-C motif JHT19_02310 PF07516 SecA Wing and Scaffold domain JHT19_02315 PF00293 NUDIX domain JHT19_02320 PF01113 Dihydrodipicolinate reductase, N-terminus JHT19_02320 PF05173 Dihydrodipicolinate reductase, C-terminus JHT19_02325 PF00117 Glutamine amidotransferase class-I JHT19_02325 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JHT19_02330 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JHT19_02330 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JHT19_02330 PF02142 MGS-like domain JHT19_02345 PF01925 Sulfite exporter TauE/SafE JHT19_02350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_02350 PF03466 LysR substrate binding domain JHT19_02355 PF03458 UPF0126 domain JHT19_02360 PF01497 Periplasmic binding protein JHT19_02365 PF17113 Regulatory signalling modulator protein AmpE JHT19_02365 PF03186 CobD/Cbib protein JHT19_02370 PF01048 Phosphorylase superfamily JHT19_02385 PF00310 Glutamine amidotransferases class-II JHT19_02385 PF04898 Glutamate synthase central domain JHT19_02385 PF01645 Conserved region in glutamate synthase JHT19_02385 PF01493 GXGXG motif JHT19_02390 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JHT19_02390 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHT19_02395 PF00310 Glutamine amidotransferases class-II JHT19_02395 PF01645 Conserved region in glutamate synthase JHT19_02395 PF04898 Glutamate synthase central domain JHT19_02395 PF01493 GXGXG motif JHT19_02400 PF04055 Radical SAM superfamily JHT19_02400 PF16199 Radical_SAM C-terminal domain JHT19_02405 PF00563 EAL domain JHT19_02405 PF01590 GAF domain JHT19_02405 PF00990 Diguanylate cyclase, GGDEF domain JHT19_02405 PF00360 Phytochrome region JHT19_02410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_02410 PF00512 His Kinase A (phospho-acceptor) domain JHT19_02410 PF18415 Histidine kinase receptor ArcB trans-membrane domain JHT19_02410 PF01627 Hpt domain JHT19_02410 PF00989 PAS fold JHT19_02410 PF00072 Response regulator receiver domain JHT19_02420 PF00072 Response regulator receiver domain JHT19_02420 PF00486 Transcriptional regulatory protein, C terminal JHT19_02430 PF03737 Aldolase/RraA JHT19_02440 PF00696 Amino acid kinase family JHT19_02440 PF01842 ACT domain JHT19_02440 PF13840 ACT domain JHT19_02440 PF00742 Homoserine dehydrogenase JHT19_02440 PF03447 Homoserine dehydrogenase, NAD binding domain JHT19_02445 PF08544 GHMP kinases C terminal JHT19_02445 PF00288 GHMP kinases N terminal domain JHT19_02450 PF00291 Pyridoxal-phosphate dependent enzyme JHT19_02450 PF14821 Threonine synthase N terminus JHT19_02455 PF01228 Glycine radical JHT19_02460 PF01261 Xylose isomerase-like TIM barrel JHT19_02465 PF03167 Uracil DNA glycosylase superfamily JHT19_02480 PF01235 Sodium:alanine symporter family JHT19_02485 PF03883 Peroxide stress protein YaaA JHT19_02490 PF00270 DEAD/DEAH box helicase JHT19_02490 PF00271 Helicase conserved C-terminal domain JHT19_02495 PF05175 Methyltransferase small domain JHT19_02500 PF05525 Branched-chain amino acid transport protein JHT19_02505 PF00258 Flavodoxin JHT19_02510 PF02899 Phage integrase, N-terminal SAM-like domain JHT19_02510 PF00589 Phage integrase family JHT19_02515 PF10411 Disulfide bond isomerase protein N-terminus JHT19_02515 PF13098 Thioredoxin-like domain JHT19_02520 PF01368 DHH family JHT19_02520 PF02272 DHHA1 domain JHT19_02520 PF17768 RecJ OB domain JHT19_02530 PF00152 tRNA synthetases class II (D, K and N) JHT19_02530 PF01336 OB-fold nucleic acid binding domain JHT19_02535 PF02954 Bacterial regulatory protein, Fis family JHT19_02535 PF00072 Response regulator receiver domain JHT19_02535 PF00158 Sigma-54 interaction domain JHT19_02545 PF00248 Aldo/keto reductase family JHT19_02560 PF00293 NUDIX domain JHT19_02575 PF01790 Prolipoprotein diacylglyceryl transferase JHT19_02580 PF00303 Thymidylate synthase JHT19_02590 PF02690 Na+/Pi-cotransporter JHT19_02595 PF03466 LysR substrate binding domain JHT19_02595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_02600 PF01022 Bacterial regulatory protein, arsR family JHT19_02605 PF01649 Ribosomal protein S20 JHT19_02610 PF03023 Lipid II flippase MurJ JHT19_02615 PF06574 FAD synthetase JHT19_02615 PF01687 Riboflavin kinase JHT19_02620 PF08264 Anticodon-binding domain of tRNA JHT19_02620 PF00133 tRNA synthetases class I (I, L, M and V) JHT19_02620 PF06827 Zinc finger found in FPG and IleRS JHT19_02625 PF01252 Signal peptidase (SPase) II JHT19_02630 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JHT19_02635 PF02401 LytB protein JHT19_02640 PF04397 LytTr DNA-binding domain JHT19_02640 PF00072 Response regulator receiver domain JHT19_02645 PF07694 5TMR of 5TMR-LYT JHT19_02645 PF06580 Histidine kinase JHT19_02650 PF02554 Carbon starvation protein CstA JHT19_02665 PF13580 SIS domain JHT19_02670 PF03702 Anhydro-N-acetylmuramic acid kinase JHT19_02675 PF00933 Glycosyl hydrolase family 3 N terminal domain JHT19_02680 PF00793 DAHP synthetase I family JHT19_02690 PF04225 Opacity-associated protein A LysM-like domain JHT19_02690 PF01551 Peptidase family M23 JHT19_02695 PF07238 PilZ domain JHT19_02700 PF00005 ABC transporter JHT19_02700 PF12848 ABC transporter JHT19_02705 PF01464 Transglycosylase SLT domain JHT19_02705 PF14718 Soluble lytic murein transglycosylase L domain JHT19_02710 PF01371 Trp repressor protein JHT19_02715 PF01931 Protein of unknown function DUF84 JHT19_02720 PF01817 Chorismate mutase type II JHT19_02720 PF00800 Prephenate dehydratase JHT19_02725 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JHT19_02730 PF01464 Transglycosylase SLT domain JHT19_02735 PF13525 Outer membrane lipoprotein JHT19_02745 PF02578 Multi-copper polyphenol oxidoreductase laccase JHT19_02750 PF17871 AAA lid domain JHT19_02750 PF02861 Clp amino terminal domain, pathogenicity island component JHT19_02750 PF10431 C-terminal, D2-small domain, of ClpB protein JHT19_02750 PF07724 AAA domain (Cdc48 subfamily) JHT19_02750 PF00004 ATPase family associated with various cellular activities (AAA) JHT19_02805 PF00037 4Fe-4S binding domain JHT19_02810 PF16325 Peptidase family U32 C-terminal domain JHT19_02810 PF01136 Peptidase family U32 JHT19_02815 PF04381 Putative exonuclease, RdgC JHT19_02820 PF00072 Response regulator receiver domain JHT19_02820 PF00486 Transcriptional regulatory protein, C terminal JHT19_02825 PF00989 PAS fold JHT19_02825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_02825 PF00512 His Kinase A (phospho-acceptor) domain JHT19_02825 PF11808 Phosphate regulon sensor protein PhoR JHT19_02830 PF12849 PBP superfamily domain JHT19_02835 PF02541 Ppx/GppA phosphatase family JHT19_02840 PF13089 Polyphosphate kinase N-terminal domain JHT19_02840 PF02503 Polyphosphate kinase middle domain JHT19_02840 PF17941 Polyphosphate kinase C-terminal domain 1 JHT19_02840 PF13090 Polyphosphate kinase C-terminal domain 2 JHT19_02845 PF00528 Binding-protein-dependent transport system inner membrane component JHT19_02850 PF00528 Binding-protein-dependent transport system inner membrane component JHT19_02855 PF00005 ABC transporter JHT19_02860 PF01895 PhoU domain JHT19_02865 PF03976 Polyphosphate kinase 2 (PPK2) JHT19_02870 PF03932 CutC family JHT19_02875 PF00578 AhpC/TSA family JHT19_02875 PF10417 C-terminal domain of 1-Cys peroxiredoxin JHT19_02880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_02880 PF03466 LysR substrate binding domain JHT19_02885 PF01274 Malate synthase JHT19_02890 PF00463 Isocitrate lyase family JHT19_02895 PF00571 CBS domain JHT19_02905 PF02547 Queuosine biosynthesis protein JHT19_02910 PF01702 Queuine tRNA-ribosyltransferase JHT19_02915 PF02699 Preprotein translocase subunit JHT19_02920 PF07549 SecD/SecF GG Motif JHT19_02920 PF13721 SecD export protein N-terminal TM region JHT19_02920 PF02355 Protein export membrane protein JHT19_02925 PF07549 SecD/SecF GG Motif JHT19_02925 PF02355 Protein export membrane protein JHT19_02930 PF00459 Inositol monophosphatase family JHT19_02935 PF00588 SpoU rRNA Methylase family JHT19_02940 PF02082 Transcriptional regulator JHT19_02945 PF00266 Aminotransferase class-V JHT19_02950 PF01592 NifU-like N terminal domain JHT19_02955 PF01521 Iron-sulphur cluster biosynthesis JHT19_02960 PF00226 DnaJ domain JHT19_02960 PF07743 HSCB C-terminal oligomerisation domain JHT19_02965 PF00012 Hsp70 protein JHT19_02970 PF00111 2Fe-2S iron-sulfur cluster binding domain JHT19_02975 PF04384 Iron-sulphur cluster assembly JHT19_02980 PF12404 Peptidase JHT19_02980 PF00883 Cytosol aminopeptidase family, catalytic domain JHT19_02985 PF00334 Nucleoside diphosphate kinase JHT19_02990 PF04055 Radical SAM superfamily JHT19_02995 PF13464 Domain of unknown function (DUF4115) JHT19_03000 PF04551 GcpE protein JHT19_03005 PF03129 Anticodon binding domain JHT19_03005 PF13393 Histidyl-tRNA synthetase JHT19_03010 PF09976 Tetratricopeptide repeat-like domain JHT19_03015 PF13360 PQQ-like domain JHT19_03020 PF01926 50S ribosome-binding GTPase JHT19_03020 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JHT19_03035 PF13742 OB-fold nucleic acid binding domain JHT19_03035 PF02601 Exonuclease VII, large subunit JHT19_03045 PF00958 GMP synthase C terminal domain JHT19_03045 PF02540 NAD synthase JHT19_03045 PF00117 Glutamine amidotransferase class-I JHT19_03050 PF03553 Na+/H+ antiporter family JHT19_03055 PF06483 Chitinase C JHT19_03055 PF00704 Glycosyl hydrolases family 18 JHT19_03060 PF01184 GPR1/FUN34/yaaH family JHT19_03070 PF01235 Sodium:alanine symporter family JHT19_03075 PF01266 FAD dependent oxidoreductase JHT19_03080 PF03466 LysR substrate binding domain JHT19_03080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_03095 PF07969 Amidohydrolase family JHT19_03100 PF01053 Cys/Met metabolism PLP-dependent enzyme JHT19_03105 PF00202 Aminotransferase class-III JHT19_03125 PF00583 Acetyltransferase (GNAT) family JHT19_03125 PF00795 Carbon-nitrogen hydrolase JHT19_03130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_03130 PF03466 LysR substrate binding domain JHT19_03150 PF01668 SmpB protein JHT19_03155 PF03364 Polyketide cyclase / dehydrase and lipid transport JHT19_03160 PF03658 RnfH family Ubiquitin JHT19_03165 PF04355 SmpA / OmlA family JHT19_03170 PF02463 RecF/RecN/SMC N terminal domain JHT19_03180 PF01513 ATP-NAD kinase JHT19_03185 PF01025 GrpE JHT19_03190 PF00375 Sodium:dicarboxylate symporter family JHT19_03195 PF00012 Hsp70 protein JHT19_03200 PF01556 DnaJ C terminal domain JHT19_03200 PF00684 DnaJ central domain JHT19_03200 PF00226 DnaJ domain JHT19_03205 PF07963 Prokaryotic N-terminal methylation motif JHT19_03205 PF00114 Pilin (bacterial filament) JHT19_03210 PF00114 Pilin (bacterial filament) JHT19_03210 PF07963 Prokaryotic N-terminal methylation motif JHT19_03230 PF03806 AbgT putative transporter family JHT19_03235 PF14437 MafB19-like deaminase JHT19_03240 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHT19_03240 PF01464 Transglycosylase SLT domain JHT19_03245 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JHT19_03245 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal JHT19_03245 PF02769 AIR synthase related protein, C-terminal domain JHT19_03270 PF07687 Peptidase dimerisation domain JHT19_03270 PF01546 Peptidase family M20/M25/M40 JHT19_03275 PF00860 Permease family JHT19_03280 PF00156 Phosphoribosyl transferase domain JHT19_03285 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) JHT19_03290 PF07417 Sigma factor-binding transcriptional regulator Crl JHT19_03295 PF00696 Amino acid kinase family JHT19_03295 PF01472 PUA domain JHT19_03300 PF00171 Aldehyde dehydrogenase family JHT19_03305 PF03477 ATP cone domain JHT19_03310 PF01872 RibD C-terminal domain JHT19_03310 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JHT19_03315 PF00677 Lumazine binding domain JHT19_03320 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JHT19_03320 PF00925 GTP cyclohydrolase II JHT19_03325 PF00885 6,7-dimethyl-8-ribityllumazine synthase JHT19_03330 PF01029 NusB family JHT19_03335 PF02769 AIR synthase related protein, C-terminal domain JHT19_03335 PF00586 AIR synthase related protein, N-terminal domain JHT19_03340 PF04608 Phosphatidylglycerophosphatase A JHT19_03345 PF02780 Transketolase, C-terminal domain JHT19_03345 PF02779 Transketolase, pyrimidine binding domain JHT19_03345 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JHT19_03350 PF00348 Polyprenyl synthetase JHT19_03355 PF02609 Exonuclease VII small subunit JHT19_03360 PF01618 MotA/TolQ/ExbB proton channel family JHT19_03365 PF00691 OmpA family JHT19_03370 PF02926 THUMP domain JHT19_03370 PF02568 Thiamine biosynthesis protein (ThiI) JHT19_03375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_03375 PF03466 LysR substrate binding domain JHT19_03385 PF04241 Protein of unknown function (DUF423) JHT19_03390 PF18125 RlmM ferredoxin-like domain JHT19_03390 PF01728 FtsJ-like methyltransferase JHT19_03395 PF01223 DNA/RNA non-specific endonuclease JHT19_03405 PF03641 Possible lysine decarboxylase JHT19_03405 PF11892 Domain of unknown function (DUF3412) JHT19_03405 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases JHT19_03410 PF00990 Diguanylate cyclase, GGDEF domain JHT19_03420 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term JHT19_03420 PF14489 QueF-like protein JHT19_03425 PF07348 Syd protein (SUKH-2) JHT19_03430 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) JHT19_03435 PF03180 NLPA lipoprotein JHT19_03440 PF00528 Binding-protein-dependent transport system inner membrane component JHT19_03445 PF00005 ABC transporter JHT19_03445 PF09383 NIL domain JHT19_03455 PF00356 Bacterial regulatory proteins, lacI family JHT19_03460 PF00367 phosphotransferase system, EIIB JHT19_03460 PF02378 Phosphotransferase system, EIIC JHT19_03465 PF16657 Maltogenic Amylase, C-terminal domain JHT19_03465 PF00128 Alpha amylase, catalytic domain JHT19_03480 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JHT19_03480 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JHT19_03485 PF00464 Serine hydroxymethyltransferase JHT19_03490 PF04055 Radical SAM superfamily JHT19_03490 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family JHT19_03495 PF03099 Biotin/lipoate A/B protein ligase family JHT19_03500 PF04359 Protein of unknown function (DUF493) JHT19_03505 PF00768 D-alanyl-D-alanine carboxypeptidase JHT19_03505 PF07943 Penicillin-binding protein 5, C-terminal domain JHT19_03510 PF03330 Lytic transglycolase JHT19_03510 PF05036 Sporulation related domain JHT19_03515 PF01098 Cell cycle protein JHT19_03520 PF03717 Penicillin-binding Protein dimerisation domain JHT19_03520 PF00905 Penicillin binding protein transpeptidase domain JHT19_03525 PF02590 Predicted SPOUT methyltransferase JHT19_03535 PF14840 Processivity clamp loader gamma complex DNA pol III C-term JHT19_03535 PF06144 DNA polymerase III, delta subunit JHT19_03540 PF04390 Lipopolysaccharide-assembly JHT19_03545 PF13603 Leucyl-tRNA synthetase, Domain 2 JHT19_03545 PF00133 tRNA synthetases class I (I, L, M and V) JHT19_03545 PF08264 Anticodon-binding domain of tRNA JHT19_03550 PF07295 Zinc-ribbon containing domain JHT19_03555 PF00795 Carbon-nitrogen hydrolase JHT19_03560 PF00571 CBS domain JHT19_03560 PF03471 Transporter associated domain JHT19_03565 PF02130 Uncharacterized protein family UPF0054 JHT19_03570 PF02562 PhoH-like protein JHT19_03575 PF01938 TRAM domain JHT19_03575 PF04055 Radical SAM superfamily JHT19_03575 PF00919 Uncharacterized protein family UPF0004 JHT19_03695 PF01926 50S ribosome-binding GTPase JHT19_03695 PF06071 Protein of unknown function (DUF933) JHT19_03700 PF01195 Peptidyl-tRNA hydrolase JHT19_03705 PF14572 Phosphoribosyl synthetase-associated domain JHT19_03705 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JHT19_03710 PF08544 GHMP kinases C terminal JHT19_03710 PF00288 GHMP kinases N terminal domain JHT19_03715 PF03550 Outer membrane lipoprotein LolB JHT19_03720 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JHT19_03720 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JHT19_03720 PF01488 Shikimate / quinate 5-dehydrogenase JHT19_03725 PF03462 PCRF domain JHT19_03725 PF00472 RF-1 domain JHT19_03730 PF17827 PrmC N-terminal domain JHT19_03730 PF13847 Methyltransferase domain JHT19_03735 PF04247 Invasion gene expression up-regulator, SirB JHT19_03740 PF13369 Transglutaminase-like superfamily JHT19_03745 PF00793 DAHP synthetase I family JHT19_03750 PF02872 5'-nucleotidase, C-terminal domain JHT19_03750 PF00149 Calcineurin-like phosphoesterase JHT19_03755 PF04073 Aminoacyl-tRNA editing domain JHT19_03760 PF00849 RNA pseudouridylate synthase JHT19_03760 PF01479 S4 domain JHT19_03765 PF01713 Smr domain JHT19_03785 PF03173 Putative carbohydrate binding domain JHT19_03785 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain JHT19_03785 PF00728 Glycosyl hydrolase family 20, catalytic domain JHT19_03785 PF02838 Glycosyl hydrolase family 20, domain 2 JHT19_03800 PF00403 Heavy-metal-associated domain JHT19_03805 PF13609 Gram-negative porin JHT19_03810 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) JHT19_03815 PF00749 tRNA synthetases class I (E and Q), catalytic domain JHT19_03820 PF01389 OmpA-like transmembrane domain JHT19_03820 PF00691 OmpA family JHT19_03865 PF01584 CheW-like domain JHT19_03865 PF00072 Response regulator receiver domain JHT19_03870 PF01739 CheR methyltransferase, SAM binding domain JHT19_03870 PF03705 CheR methyltransferase, all-alpha domain JHT19_03875 PF00460 Flagella basal body rod protein JHT19_03880 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JHT19_03880 PF00460 Flagella basal body rod protein JHT19_03885 PF13861 FlgD Tudor-like domain JHT19_03885 PF13860 FlgD Ig-like domain JHT19_03885 PF03963 Flagellar hook capping protein - N-terminal region JHT19_03890 PF00460 Flagella basal body rod protein JHT19_03890 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JHT19_03890 PF07559 Flagellar basal body protein FlaE JHT19_03895 PF00460 Flagella basal body rod protein JHT19_03895 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JHT19_03900 PF00460 Flagella basal body rod protein JHT19_03900 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JHT19_03905 PF02107 Flagellar L-ring protein JHT19_03910 PF02119 Flagellar P-ring protein JHT19_03915 PF10135 Rod binding protein JHT19_03915 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JHT19_03920 PF07196 Flagellin hook IN motif JHT19_03920 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JHT19_03925 PF00669 Bacterial flagellin N-terminal helical region JHT19_03930 PF00700 Bacterial flagellin C-terminal helical region JHT19_03930 PF07196 Flagellin hook IN motif JHT19_03930 PF00669 Bacterial flagellin N-terminal helical region JHT19_03935 PF00700 Bacterial flagellin C-terminal helical region JHT19_03935 PF07196 Flagellin hook IN motif JHT19_03935 PF00669 Bacterial flagellin N-terminal helical region JHT19_03940 PF00700 Bacterial flagellin C-terminal helical region JHT19_03940 PF07196 Flagellin hook IN motif JHT19_03940 PF00669 Bacterial flagellin N-terminal helical region JHT19_03945 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JHT19_03950 PF05524 PEP-utilising enzyme, N-terminal JHT19_03950 PF00391 PEP-utilising enzyme, mobile domain JHT19_03950 PF02896 PEP-utilising enzyme, TIM barrel domain JHT19_03955 PF00381 PTS HPr component phosphorylation site JHT19_03960 PF00291 Pyridoxal-phosphate dependent enzyme JHT19_03970 PF04354 ZipA, C-terminal FtsZ-binding domain JHT19_03975 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JHT19_03975 PF03120 NAD-dependent DNA ligase OB-fold domain JHT19_03975 PF01653 NAD-dependent DNA ligase adenylation domain JHT19_03975 PF00533 BRCA1 C Terminus (BRCT) domain JHT19_03975 PF12826 Helix-hairpin-helix motif JHT19_03980 PF03573 outer membrane porin, OprD family JHT19_03995 PF01145 SPFH domain / Band 7 family JHT19_03995 PF16200 C-terminal region of band_7 JHT19_04000 PF00085 Thioredoxin JHT19_04005 PF00106 short chain dehydrogenase JHT19_04010 PF08338 Domain of unknown function (DUF1731) JHT19_04010 PF01370 NAD dependent epimerase/dehydratase family JHT19_04015 PF07556 Protein of unknown function (DUF1538) JHT19_04020 PF07556 Protein of unknown function (DUF1538) JHT19_04035 PF12850 Calcineurin-like phosphoesterase superfamily domain JHT19_04050 PF17323 Trans-membrane regulatory protein ToxS JHT19_04055 PF00486 Transcriptional regulatory protein, C terminal JHT19_04060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_04060 PF00183 Hsp90 protein JHT19_04065 PF05191 Adenylate kinase, active site lid JHT19_04070 PF00762 Ferrochelatase JHT19_04075 PF00854 POT family JHT19_04080 PF02357 Transcription termination factor nusG JHT19_04085 PF00733 Asparagine synthase JHT19_04085 PF13537 Glutamine amidotransferase domain JHT19_04090 PF00999 Sodium/hydrogen exchanger family JHT19_04090 PF02254 TrkA-N domain JHT19_04095 PF01047 MarR family JHT19_04095 PF00480 ROK family JHT19_04100 PF01979 Amidohydrolase family JHT19_04105 PF00367 phosphotransferase system, EIIB JHT19_04105 PF02378 Phosphotransferase system, EIIC JHT19_04110 PF00749 tRNA synthetases class I (E and Q), catalytic domain JHT19_04110 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain JHT19_04115 PF01475 Ferric uptake regulator family JHT19_04125 PF00258 Flavodoxin JHT19_04135 PF12697 Alpha/beta hydrolase family JHT19_04140 PF03925 SeqA protein C-terminal domain JHT19_04140 PF17206 SeqA protein N-terminal domain JHT19_04145 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JHT19_04145 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JHT19_04145 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JHT19_04145 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JHT19_04155 PF01784 NIF3 (NGG1p interacting factor 3) JHT19_04160 PF00285 Citrate synthase, C-terminal domain JHT19_04165 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JHT19_04170 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JHT19_04175 PF00890 FAD binding domain JHT19_04175 PF02910 Fumarate reductase flavoprotein C-term JHT19_04180 PF13085 2Fe-2S iron-sulfur cluster binding domain JHT19_04185 PF16078 2-oxoglutarate dehydrogenase N-terminus JHT19_04185 PF00676 Dehydrogenase E1 component JHT19_04185 PF16870 2-oxoglutarate dehydrogenase C-terminal JHT19_04185 PF02779 Transketolase, pyrimidine binding domain JHT19_04190 PF00364 Biotin-requiring enzyme JHT19_04190 PF02817 e3 binding domain JHT19_04190 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JHT19_04195 PF08442 ATP-grasp domain JHT19_04195 PF00549 CoA-ligase JHT19_04200 PF02629 CoA binding domain JHT19_04200 PF00549 CoA-ligase JHT19_04205 PF00950 ABC 3 transport family JHT19_04210 PF00005 ABC transporter JHT19_04215 PF01297 Zinc-uptake complex component A periplasmic JHT19_04220 PF02311 AraC-like ligand binding domain JHT19_04220 PF12833 Helix-turn-helix domain JHT19_04225 PF04023 FeoA domain JHT19_04230 PF07664 Ferrous iron transport protein B C terminus JHT19_04230 PF17910 FeoB cytosolic helical domain JHT19_04230 PF02421 Ferrous iron transport protein B JHT19_04230 PF07670 Nucleoside recognition JHT19_04245 PF03485 Arginyl tRNA synthetase N terminal domain JHT19_04245 PF05746 DALR anticodon binding domain JHT19_04245 PF00750 tRNA synthetases class I (R) JHT19_04250 PF06185 YecM protein JHT19_04255 PF01842 ACT domain JHT19_04255 PF00551 Formyl transferase JHT19_04265 PF00814 Glycoprotease family JHT19_04280 PF00561 alpha/beta hydrolase fold JHT19_04290 PF00570 HRDC domain JHT19_04290 PF01612 3'-5' exonuclease JHT19_04295 PF03776 Septum formation topological specificity factor MinE JHT19_04300 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JHT19_04305 PF03775 Septum formation inhibitor MinC, C-terminal domain JHT19_04305 PF05209 Septum formation inhibitor MinC, N-terminal domain JHT19_04310 PF05166 YcgL domain JHT19_04315 PF13406 Transglycosylase SLT domain JHT19_04320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_04320 PF03466 LysR substrate binding domain JHT19_04325 PF01773 Na+ dependent nucleoside transporter N-terminus JHT19_04325 PF07662 Na+ dependent nucleoside transporter C-terminus JHT19_04325 PF07670 Nucleoside recognition JHT19_04330 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JHT19_04330 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JHT19_04345 PF02801 Beta-ketoacyl synthase, C-terminal domain JHT19_04345 PF00109 Beta-ketoacyl synthase, N-terminal domain JHT19_04355 PF07977 FabA-like domain JHT19_04360 PF00109 Beta-ketoacyl synthase, N-terminal domain JHT19_04360 PF02801 Beta-ketoacyl synthase, C-terminal domain JHT19_04385 PF00221 Aromatic amino acid lyase JHT19_04390 PF00535 Glycosyl transferase family 2 JHT19_04395 PF07977 FabA-like domain JHT19_04410 PF00550 Phosphopantetheine attachment site JHT19_04415 PF00550 Phosphopantetheine attachment site JHT19_04440 PF04820 Tryptophan halogenase JHT19_04450 PF00571 CBS domain JHT19_04450 PF01595 Cyclin M transmembrane N-terminal domain JHT19_04450 PF03471 Transporter associated domain JHT19_04455 PF00270 DEAD/DEAH box helicase JHT19_04455 PF00271 Helicase conserved C-terminal domain JHT19_04460 PF02080 TrkA-C domain JHT19_04460 PF02254 TrkA-N domain JHT19_04480 PF02696 Uncharacterized ACR, YdiU/UPF0061 family JHT19_04485 PF03480 Bacterial extracellular solute-binding protein, family 7 JHT19_04490 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component JHT19_04495 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JHT19_04505 PF02954 Bacterial regulatory protein, Fis family JHT19_04505 PF00158 Sigma-54 interaction domain JHT19_04505 PF00072 Response regulator receiver domain JHT19_04510 PF02743 Cache domain JHT19_04510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_04510 PF00512 His Kinase A (phospho-acceptor) domain JHT19_04520 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JHT19_04520 PF05698 Bacterial trigger factor protein (TF) C-terminus JHT19_04520 PF05697 Bacterial trigger factor protein (TF) JHT19_04525 PF00574 Clp protease JHT19_04530 PF07724 AAA domain (Cdc48 subfamily) JHT19_04530 PF10431 C-terminal, D2-small domain, of ClpB protein JHT19_04530 PF06689 ClpX C4-type zinc finger JHT19_04535 PF00004 ATPase family associated with various cellular activities (AAA) JHT19_04535 PF05362 Lon protease (S16) C-terminal proteolytic domain JHT19_04535 PF02190 ATP-dependent protease La (LON) substrate-binding domain JHT19_04540 PF00216 Bacterial DNA-binding protein JHT19_04545 PF13145 PPIC-type PPIASE domain JHT19_04565 PF01966 HD domain JHT19_04565 PF13286 Phosphohydrolase-associated domain JHT19_04575 PF00155 Aminotransferase class I and II JHT19_04580 PF00425 chorismate binding enzyme JHT19_04585 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JHT19_04585 PF16582 Middle domain of thiamine pyrophosphate JHT19_04585 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JHT19_04590 PF12697 Alpha/beta hydrolase family JHT19_04595 PF00378 Enoyl-CoA hydratase/isomerase JHT19_04600 PF13378 Enolase C-terminal domain-like JHT19_04605 PF00501 AMP-binding enzyme JHT19_04605 PF13193 AMP-binding enzyme C-terminal domain JHT19_04615 PF03601 Conserved hypothetical protein 698 JHT19_04620 PF07690 Major Facilitator Superfamily JHT19_04665 PF13533 Biotin-lipoyl like JHT19_04670 PF00873 AcrB/AcrD/AcrF family JHT19_04690 PF00291 Pyridoxal-phosphate dependent enzyme JHT19_04695 PF01037 Lrp/AsnC ligand binding domain JHT19_04695 PF13404 AsnC-type helix-turn-helix domain JHT19_04710 PF09619 Type III secretion system lipoprotein chaperone (YscW) JHT19_04715 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JHT19_04725 PF00990 Diguanylate cyclase, GGDEF domain JHT19_04725 PF17152 Periplasmic sensor domain JHT19_04805 PF03781 Sulfatase-modifying factor enzyme 1 JHT19_04805 PF00069 Protein kinase domain JHT19_04835 PF02954 Bacterial regulatory protein, Fis family JHT19_04865 PF00588 SpoU rRNA Methylase family JHT19_04865 PF08032 RNA 2'-O ribose methyltransferase substrate binding JHT19_04870 PF00037 4Fe-4S binding domain JHT19_04870 PF11953 Domain of unknown function (DUF3470) JHT19_04880 PF00571 CBS domain JHT19_04880 PF00478 IMP dehydrogenase / GMP reductase domain JHT19_04885 PF00403 Heavy-metal-associated domain JHT19_04890 PF01048 Phosphorylase superfamily JHT19_04905 PF01230 HIT domain JHT19_04920 PF08139 Prokaryotic membrane lipoprotein lipid attachment site JHT19_04920 PF13036 Peptidoglycan-synthase activator LpoB JHT19_04930 PF05728 Uncharacterised protein family (UPF0227) JHT19_04935 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHT19_04950 PF02559 CarD-like/TRCF domain JHT19_04950 PF00270 DEAD/DEAH box helicase JHT19_04950 PF00271 Helicase conserved C-terminal domain JHT19_04950 PF03461 TRCF domain JHT19_04950 PF17757 UvrB interaction domain JHT19_04960 PF02687 FtsX-like permease family JHT19_04960 PF12704 MacB-like periplasmic core domain JHT19_04965 PF00005 ABC transporter JHT19_04980 PF03772 Competence protein JHT19_04980 PF13567 Domain of unknown function (DUF4131) JHT19_04980 PF00753 Metallo-beta-lactamase superfamily JHT19_04985 PF00664 ABC transporter transmembrane region JHT19_04985 PF00005 ABC transporter JHT19_04990 PF02606 Tetraacyldisaccharide-1-P 4'-kinase JHT19_04995 PF03966 Trm112p-like protein JHT19_05000 PF02348 Cytidylyltransferase JHT19_05005 PF04293 SpoVR like protein JHT19_05010 PF04285 Protein of unknown function (DUF444) JHT19_05015 PF08298 PrkA AAA domain JHT19_05015 PF06798 PrkA serine protein kinase C-terminal domain JHT19_05020 PF03887 YfbU domain JHT19_05030 PF04055 Radical SAM superfamily JHT19_05040 PF01228 Glycine radical JHT19_05040 PF02901 Pyruvate formate lyase-like JHT19_05055 PF00005 ABC transporter JHT19_05060 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHT19_05065 PF00528 Binding-protein-dependent transport system inner membrane component JHT19_05070 PF00528 Binding-protein-dependent transport system inner membrane component JHT19_05080 PF03372 Endonuclease/Exonuclease/phosphatase family JHT19_05085 PF10689 Protein of unknown function (DUF2496) JHT19_05090 PF07445 Primosomal replication protein priC JHT19_05095 PF01925 Sulfite exporter TauE/SafE JHT19_05100 PF06733 DEAD_2 JHT19_05100 PF13307 Helicase C-terminal domain JHT19_05110 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) JHT19_05115 PF00849 RNA pseudouridylate synthase JHT19_05120 PF03971 Monomeric isocitrate dehydrogenase JHT19_05125 PF00313 'Cold-shock' DNA-binding domain JHT19_05130 PF02617 ATP-dependent Clp protease adaptor protein ClpS JHT19_05145 PF01176 Translation initiation factor 1A / IF-1 JHT19_05150 PF04376 Arginine-tRNA-protein transferase, N terminus JHT19_05150 PF04377 Arginine-tRNA-protein transferase, C terminus JHT19_05155 PF03588 Leucyl/phenylalanyl-tRNA protein transferase JHT19_05165 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JHT19_05170 PF10692 Protein of unknown function (DUF2498) JHT19_05175 PF01396 Topoisomerase DNA binding C4 zinc finger JHT19_05175 PF01751 Toprim domain JHT19_05175 PF08272 Topoisomerase I zinc-ribbon-like JHT19_05175 PF01131 DNA topoisomerase JHT19_05180 PF00483 Nucleotidyl transferase JHT19_05185 PF08323 Starch synthase catalytic domain JHT19_05185 PF00534 Glycosyl transferases group 1 JHT19_05205 PF04994 TfoX C-terminal domain JHT19_05205 PF04993 TfoX N-terminal domain JHT19_05210 PF00356 Bacterial regulatory proteins, lacI family JHT19_05215 PF02613 Nitrate reductase delta subunit JHT19_05220 PF00486 Transcriptional regulatory protein, C terminal JHT19_05220 PF00072 Response regulator receiver domain JHT19_05225 PF02698 DUF218 domain JHT19_05230 PF13847 Methyltransferase domain JHT19_05235 PF17193 MukF C-terminal domain JHT19_05235 PF17192 MukF middle domain JHT19_05235 PF03882 MukF winged-helix domain JHT19_05240 PF04288 MukE-like family JHT19_05245 PF16330 MukB hinge domain JHT19_05245 PF04310 MukB N-terminal JHT19_05255 PF08443 RimK-like ATP-grasp domain JHT19_05255 PF18030 RimK PreATP-grasp domain JHT19_05265 PF08443 RimK-like ATP-grasp domain JHT19_05265 PF18030 RimK PreATP-grasp domain JHT19_05270 PF08003 Protein of unknown function (DUF1698) JHT19_05275 PF13649 Methyltransferase domain JHT19_05280 PF01904 Protein of unknown function DUF72 JHT19_05285 PF01336 OB-fold nucleic acid binding domain JHT19_05285 PF00152 tRNA synthetases class II (D, K and N) JHT19_05285 PF02938 GAD domain JHT19_05290 PF02075 Crossover junction endodeoxyribonuclease RuvC JHT19_05295 PF00672 HAMP domain JHT19_05295 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT19_05295 PF02203 Tar ligand binding domain homologue JHT19_05300 PF01330 RuvA N terminal domain JHT19_05300 PF07499 RuvA, C-terminal domain JHT19_05305 PF05496 Holliday junction DNA helicase RuvB P-loop domain JHT19_05305 PF05491 RuvB C-terminal winged helix domain JHT19_05305 PF17864 RuvB AAA lid domain JHT19_05310 PF01654 Cytochrome bd terminal oxidase subunit I JHT19_05315 PF02322 Cytochrome bd terminal oxidase subunit II JHT19_05320 PF08173 Membrane bound YbgT-like protein JHT19_05330 PF03061 Thioesterase superfamily JHT19_05335 PF01618 MotA/TolQ/ExbB proton channel family JHT19_05340 PF02472 Biopolymer transport protein ExbD/TolR JHT19_05350 PF07676 WD40-like Beta Propeller Repeat JHT19_05350 PF04052 TolB amino-terminal domain JHT19_05355 PF00691 OmpA family JHT19_05360 PF16331 TolA binding protein trimerisation JHT19_05360 PF13174 Tetratricopeptide repeat JHT19_05365 PF02445 Quinolinate synthetase A protein JHT19_05375 PF03994 Domain of Unknown Function (DUF350) JHT19_05385 PF03738 Glutathionylspermidine synthase preATP-grasp JHT19_05395 PF00072 Response regulator receiver domain JHT19_05395 PF09308 LuxQ, periplasmic JHT19_05395 PF00512 His Kinase A (phospho-acceptor) domain JHT19_05395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_05405 PF06610 L-alanine exporter JHT19_05415 PF02743 Cache domain JHT19_05415 PF00672 HAMP domain JHT19_05415 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT19_05420 PF00529 HlyD membrane-fusion protein of T1SS JHT19_05420 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JHT19_05425 PF00873 AcrB/AcrD/AcrF family JHT19_05440 PF00579 tRNA synthetases class I (W and Y) JHT19_05450 PF03372 Endonuclease/Exonuclease/phosphatase family JHT19_05455 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) JHT19_05465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_05465 PF03466 LysR substrate binding domain JHT19_05475 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JHT19_05475 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JHT19_05480 PF01037 Lrp/AsnC ligand binding domain JHT19_05490 PF03548 Outer membrane lipoprotein carrier protein LolA JHT19_05500 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JHT19_05500 PF02403 Seryl-tRNA synthetase N-terminal domain JHT19_05510 PF01258 Prokaryotic dksA/traR C4-type zinc finger JHT19_05515 PF00202 Aminotransferase class-III JHT19_05520 PF04055 Radical SAM superfamily JHT19_05520 PF06968 Biotin and Thiamin Synthesis associated domain JHT19_05525 PF00155 Aminotransferase class I and II JHT19_05530 PF08241 Methyltransferase domain JHT19_05545 PF01435 Peptidase family M48 JHT19_05555 PF00106 short chain dehydrogenase JHT19_05590 PF00206 Lyase JHT19_05590 PF08328 Adenylosuccinate lyase C-terminal JHT19_05595 PF04356 Protein of unknown function (DUF489) JHT19_05610 PF00294 pfkB family carbohydrate kinase JHT19_05615 PF00816 H-NS histone family JHT19_05620 PF03553 Na+/H+ antiporter family JHT19_05630 PF00158 Sigma-54 interaction domain JHT19_05630 PF00072 Response regulator receiver domain JHT19_05630 PF02954 Bacterial regulatory protein, Fis family JHT19_05635 PF01634 ATP phosphoribosyltransferase JHT19_05635 PF08029 HisG, C-terminal domain JHT19_05640 PF00815 Histidinol dehydrogenase JHT19_05645 PF00155 Aminotransferase class I and II JHT19_05650 PF08645 Polynucleotide kinase 3 phosphatase JHT19_05650 PF00475 Imidazoleglycerol-phosphate dehydratase JHT19_05655 PF00117 Glutamine amidotransferase class-I JHT19_05660 PF00977 Histidine biosynthesis protein JHT19_05665 PF00977 Histidine biosynthesis protein JHT19_05670 PF01502 Phosphoribosyl-AMP cyclohydrolase JHT19_05670 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JHT19_05675 PF02810 SEC-C motif JHT19_05680 PF00563 EAL domain JHT19_05680 PF08668 HDOD domain JHT19_05685 PF00149 Calcineurin-like phosphoesterase JHT19_05690 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JHT19_05695 PF01406 tRNA synthetases class I (C) catalytic domain JHT19_05695 PF09190 DALR domain JHT19_05700 PF00265 Thymidine kinase JHT19_05705 PF02698 DUF218 domain JHT19_05730 PF01226 Formate/nitrite transporter JHT19_05740 PF03649 Uncharacterised protein family (UPF0014) JHT19_05745 PF06796 Periplasmic nitrate reductase protein NapE JHT19_05750 PF03264 NapC/NirT cytochrome c family, N-terminal region JHT19_05755 PF01568 Molydopterin dinucleotide binding domain JHT19_05755 PF18364 Molybdopterin oxidoreductase N-terminal domain JHT19_05755 PF00384 Molybdopterin oxidoreductase JHT19_05760 PF16875 Glycosyl hydrolase family 36 N-terminal domain JHT19_05760 PF16874 Glycosyl hydrolase family 36 C-terminal domain JHT19_05770 PF02833 DHHA2 domain JHT19_05770 PF01368 DHH family JHT19_05780 PF00005 ABC transporter JHT19_05785 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JHT19_05785 PF00005 ABC transporter JHT19_05790 PF00528 Binding-protein-dependent transport system inner membrane component JHT19_05790 PF12911 N-terminal TM domain of oligopeptide transport permease C JHT19_05795 PF00528 Binding-protein-dependent transport system inner membrane component JHT19_05800 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JHT19_05805 PF02954 Bacterial regulatory protein, Fis family JHT19_05805 PF00158 Sigma-54 interaction domain JHT19_05810 PF04012 PspA/IM30 family JHT19_05815 PF06667 Phage shock protein B JHT19_05820 PF04024 PspC domain JHT19_05825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JHT19_05830 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JHT19_05835 PF00873 AcrB/AcrD/AcrF family JHT19_05840 PF03352 Methyladenine glycosylase JHT19_05845 PF03280 Proteobacterial lipase chaperone protein JHT19_05850 PF00561 alpha/beta hydrolase fold JHT19_05855 PF01053 Cys/Met metabolism PLP-dependent enzyme JHT19_05860 PF13396 Phospholipase_D-nuclease N-terminal JHT19_05860 PF13091 PLD-like domain JHT19_05865 PF00209 Sodium:neurotransmitter symporter family JHT19_05870 PF12729 Four helix bundle sensory module for signal transduction JHT19_05870 PF00672 HAMP domain JHT19_05870 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT19_05875 PF00849 RNA pseudouridylate synthase JHT19_05885 PF00175 Oxidoreductase NAD-binding domain JHT19_05885 PF00111 2Fe-2S iron-sulfur cluster binding domain JHT19_05885 PF00970 Oxidoreductase FAD-binding domain JHT19_05890 PF03063 Prismane/CO dehydrogenase family JHT19_05895 PF00158 Sigma-54 interaction domain JHT19_05895 PF01590 GAF domain JHT19_05905 PF01066 CDP-alcohol phosphatidyltransferase JHT19_05910 PF00005 ABC transporter JHT19_05915 PF00528 Binding-protein-dependent transport system inner membrane component JHT19_05920 PF13416 Bacterial extracellular solute-binding protein JHT19_05925 PF09335 SNARE associated Golgi protein JHT19_05935 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHT19_05935 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JHT19_05950 PF00196 Bacterial regulatory proteins, luxR family JHT19_05950 PF00072 Response regulator receiver domain JHT19_05960 PF06945 Protein of unknown function (DUF1289) JHT19_05970 PF02872 5'-nucleotidase, C-terminal domain JHT19_05970 PF00149 Calcineurin-like phosphoesterase JHT19_05990 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) JHT19_06025 PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 JHT19_06035 PF04984 Phage tail sheath protein subtilisin-like domain JHT19_06035 PF17482 Phage tail sheath C-terminal domain JHT19_06055 PF07030 Protein of unknown function (DUF1320) JHT19_06075 PF10124 Mu-like prophage major head subunit gpT JHT19_06090 PF06074 Protein of unknown function (DUF935) JHT19_06095 PF03237 Terminase-like family JHT19_06105 PF11985 Protein of unknown function (DUF3486) JHT19_06110 PF08461 Ribonuclease R winged-helix domain JHT19_06215 PF09077 Mu B transposition protein, C terminal JHT19_06215 PF13401 AAA domain JHT19_06220 PF09299 Mu transposase, C-terminal JHT19_06220 PF09039 Mu DNA binding, I gamma subdomain JHT19_06220 PF02316 Mu DNA-binding domain JHT19_06220 PF02914 Bacteriophage Mu transposase JHT19_06225 PF13693 Winged helix-turn-helix DNA-binding JHT19_06230 PF01386 Ribosomal L25p family JHT19_06235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_06240 PF00072 Response regulator receiver domain JHT19_06240 PF00486 Transcriptional regulatory protein, C terminal JHT19_06250 PF04851 Type III restriction enzyme, res subunit JHT19_06250 PF00271 Helicase conserved C-terminal domain JHT19_06255 PF01479 S4 domain JHT19_06255 PF00849 RNA pseudouridylate synthase JHT19_06260 PF07690 Major Facilitator Superfamily JHT19_06275 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) JHT19_06290 PF03264 NapC/NirT cytochrome c family, N-terminal region JHT19_06295 PF13460 NAD(P)H-binding JHT19_06295 PF11066 Protein of unknown function (DUF2867) JHT19_06300 PF01554 MatE JHT19_06305 PF00005 ABC transporter JHT19_06320 PF06965 Na+/H+ antiporter 1 JHT19_06330 PF16295 Tetracyclin repressor-like, C-terminal domain JHT19_06330 PF00440 Bacterial regulatory proteins, tetR family JHT19_06335 PF02770 Acyl-CoA dehydrogenase, middle domain JHT19_06335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JHT19_06335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JHT19_06335 PF09317 Domain of unknown function (DUF1974) JHT19_06340 PF12241 Trans-2-enoyl-CoA reductase catalytic region JHT19_06340 PF07055 Enoyl reductase FAD binding domain JHT19_06340 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase JHT19_06345 PF02080 TrkA-C domain JHT19_06345 PF06826 Predicted Permease Membrane Region JHT19_06350 PF00462 Glutaredoxin JHT19_06355 PF00465 Iron-containing alcohol dehydrogenase JHT19_06360 PF01380 SIS domain JHT19_06360 PF01418 Helix-turn-helix domain, rpiR family JHT19_06365 PF00282 Pyridoxal-dependent decarboxylase conserved domain JHT19_06375 PF03956 Lysine exporter LysO JHT19_06385 PF04994 TfoX C-terminal domain JHT19_06385 PF04993 TfoX N-terminal domain JHT19_06400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_06400 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHT19_06400 PF00512 His Kinase A (phospho-acceptor) domain JHT19_06410 PF00266 Aminotransferase class-V JHT19_06430 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHT19_06440 PF00266 Aminotransferase class-V JHT19_06450 PF00072 Response regulator receiver domain JHT19_06450 PF00990 Diguanylate cyclase, GGDEF domain JHT19_06455 PF00939 Sodium:sulfate symporter transmembrane region JHT19_06460 PF02698 DUF218 domain JHT19_06465 PF00390 Malic enzyme, N-terminal domain JHT19_06465 PF03949 Malic enzyme, NAD binding domain JHT19_06470 PF00270 DEAD/DEAH box helicase JHT19_06470 PF04408 Helicase associated domain (HA2) JHT19_06470 PF00271 Helicase conserved C-terminal domain JHT19_06470 PF08482 ATP-dependent helicase C-terminal JHT19_06485 PF16655 PhoD-like phosphatase, N-terminal domain JHT19_06485 PF09423 PhoD-like phosphatase JHT19_06490 PF01259 SAICAR synthetase JHT19_06510 PF00691 OmpA family JHT19_06510 PF05736 OprF membrane domain JHT19_06525 PF02913 FAD linked oxidases, C-terminal domain JHT19_06525 PF01565 FAD binding domain JHT19_06525 PF13183 4Fe-4S dicluster domain JHT19_06530 PF04191 Phospholipid methyltransferase JHT19_06540 PF00221 Aromatic amino acid lyase JHT19_06545 PF17391 Urocanase N-terminal domain JHT19_06545 PF17392 Urocanase C-terminal domain JHT19_06545 PF01175 Urocanase Rossmann-like domain JHT19_06555 PF01979 Amidohydrolase family JHT19_06560 PF00392 Bacterial regulatory proteins, gntR family JHT19_06560 PF07702 UTRA domain JHT19_06575 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JHT19_06575 PF02824 TGS domain JHT19_06575 PF03129 Anticodon binding domain JHT19_06575 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JHT19_06580 PF05198 Translation initiation factor IF-3, N-terminal domain JHT19_06580 PF00707 Translation initiation factor IF-3, C-terminal domain JHT19_06585 PF01632 Ribosomal protein L35 JHT19_06590 PF00453 Ribosomal protein L20 JHT19_06595 PF01906 Putative heavy-metal-binding JHT19_06625 PF17158 Membrane-associated sensor, integral membrane domain JHT19_06625 PF00990 Diguanylate cyclase, GGDEF domain JHT19_06630 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JHT19_06630 PF01409 tRNA synthetases class II core domain (F) JHT19_06635 PF03147 Ferredoxin-fold anticodon binding domain JHT19_06635 PF01588 Putative tRNA binding domain JHT19_06635 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JHT19_06635 PF03483 B3/4 domain JHT19_06635 PF03484 tRNA synthetase B5 domain JHT19_06645 PF00216 Bacterial DNA-binding protein JHT19_06655 PF05724 Thiopurine S-methyltransferase (TPMT) JHT19_06660 PF02222 ATP-grasp domain JHT19_06665 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JHT19_06665 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region JHT19_06670 PF04172 LrgB-like family JHT19_06675 PF03788 LrgA family JHT19_06680 PF00929 Exonuclease JHT19_06680 PF08411 Exonuclease C-terminal JHT19_06685 PF00375 Sodium:dicarboxylate symporter family JHT19_06690 PF13460 NAD(P)H-binding JHT19_06695 PF02277 Phosphoribosyltransferase JHT19_06700 PF02654 Cobalamin-5-phosphate synthase JHT19_06705 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase JHT19_06710 PF00300 Histidine phosphatase superfamily (branch 1) JHT19_06720 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family JHT19_06730 PF00005 ABC transporter JHT19_06750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_06750 PF03466 LysR substrate binding domain JHT19_06770 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JHT19_06775 PF16363 GDP-mannose 4,6 dehydratase JHT19_06785 PF01863 Protein of unknown function DUF45 JHT19_06790 PF05971 RNA methyltransferase JHT19_06810 PF00392 Bacterial regulatory proteins, gntR family JHT19_06815 PF00171 Aldehyde dehydrogenase family JHT19_06820 PF05544 Proline racemase JHT19_06835 PF02423 Ornithine cyclodeaminase/mu-crystallin family JHT19_06840 PF00701 Dihydrodipicolinate synthetase family JHT19_06845 PF00005 ABC transporter JHT19_06845 PF08402 TOBE domain JHT19_06850 PF00528 Binding-protein-dependent transport system inner membrane component JHT19_06855 PF00528 Binding-protein-dependent transport system inner membrane component JHT19_06865 PF01752 Collagenase JHT19_06865 PF08453 Peptidase family M9 N-terminal JHT19_06875 PF00005 ABC transporter JHT19_06875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JHT19_06880 PF00005 ABC transporter JHT19_06880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JHT19_06885 PF00528 Binding-protein-dependent transport system inner membrane component JHT19_06885 PF12911 N-terminal TM domain of oligopeptide transport permease C JHT19_06890 PF00528 Binding-protein-dependent transport system inner membrane component JHT19_06895 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JHT19_06900 PF01546 Peptidase family M20/M25/M40 JHT19_06900 PF07687 Peptidase dimerisation domain JHT19_06905 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JHT19_06910 PF04209 homogentisate 1,2-dioxygenase JHT19_06920 PF14497 Glutathione S-transferase, C-terminal domain JHT19_06920 PF02798 Glutathione S-transferase, N-terminal domain JHT19_06965 PF13533 Biotin-lipoyl like JHT19_06980 PF08543 Phosphomethylpyrimidine kinase JHT19_06985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_06985 PF03466 LysR substrate binding domain JHT19_07005 PF00300 Histidine phosphatase superfamily (branch 1) JHT19_07020 PF00939 Sodium:sulfate symporter transmembrane region JHT19_07025 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHT19_07025 PF00512 His Kinase A (phospho-acceptor) domain JHT19_07025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_07030 PF00158 Sigma-54 interaction domain JHT19_07030 PF00072 Response regulator receiver domain JHT19_07030 PF02954 Bacterial regulatory protein, Fis family JHT19_07035 PF03707 Bacterial signalling protein N terminal repeat JHT19_07035 PF00990 Diguanylate cyclase, GGDEF domain JHT19_07035 PF00563 EAL domain JHT19_07040 PF11871 Domain of unknown function (DUF3391) JHT19_07040 PF01966 HD domain JHT19_07045 PF01810 LysE type translocator JHT19_07050 PF11230 Protein of unknown function (DUF3029) JHT19_07055 PF04055 Radical SAM superfamily JHT19_07065 PF03741 Integral membrane protein TerC family JHT19_07070 PF01476 LysM domain JHT19_07070 PF08525 Opacity-associated protein A N-terminal motif JHT19_07070 PF01551 Peptidase family M23 JHT19_07105 PF02954 Bacterial regulatory protein, Fis family JHT19_07105 PF00158 Sigma-54 interaction domain JHT19_07105 PF00072 Response regulator receiver domain JHT19_07110 PF17871 AAA lid domain JHT19_07110 PF00004 ATPase family associated with various cellular activities (AAA) JHT19_07110 PF07724 AAA domain (Cdc48 subfamily) JHT19_07110 PF10431 C-terminal, D2-small domain, of ClpB protein JHT19_07115 PF05638 Type VI secretion system effector, Hcp JHT19_07120 PF04717 Type VI secretion system, phage-baseplate injector JHT19_07145 PF00069 Protein kinase domain JHT19_07160 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath JHT19_07170 PF05947 Type VI secretion system, TssF JHT19_07180 PF01037 Lrp/AsnC ligand binding domain JHT19_07210 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE JHT19_07265 PF01966 HD domain JHT19_07270 PF00465 Iron-containing alcohol dehydrogenase JHT19_07275 PF03222 Tryptophan/tyrosine permease family JHT19_07295 PF00664 ABC transporter transmembrane region JHT19_07295 PF00005 ABC transporter JHT19_07300 PF00664 ABC transporter transmembrane region JHT19_07300 PF00005 ABC transporter JHT19_07325 PF00012 Hsp70 protein JHT19_07330 PF00012 Hsp70 protein JHT19_07370 PF01568 Molydopterin dinucleotide binding domain JHT19_07370 PF00384 Molybdopterin oxidoreductase JHT19_07370 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JHT19_07375 PF13247 4Fe-4S dicluster domain JHT19_07375 PF12800 4Fe-4S binding domain JHT19_07380 PF04976 DMSO reductase anchor subunit (DmsC) JHT19_07385 PF02613 Nitrate reductase delta subunit JHT19_07395 PF02525 Flavodoxin-like fold JHT19_07400 PF00270 DEAD/DEAH box helicase JHT19_07400 PF11898 Domain of unknown function (DUF3418) JHT19_07400 PF04408 Helicase associated domain (HA2) JHT19_07400 PF00271 Helicase conserved C-terminal domain JHT19_07400 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold JHT19_07415 PF02028 BCCT, betaine/carnitine/choline family transporter JHT19_07425 PF02397 Bacterial sugar transferase JHT19_07430 PF00535 Glycosyl transferase family 2 JHT19_07435 PF13439 Glycosyltransferase Family 4 JHT19_07435 PF00534 Glycosyl transferases group 1 JHT19_07465 PF13439 Glycosyltransferase Family 4 JHT19_07465 PF00534 Glycosyl transferases group 1 JHT19_07470 PF13439 Glycosyltransferase Family 4 JHT19_07470 PF00534 Glycosyl transferases group 1 JHT19_07475 PF02954 Bacterial regulatory protein, Fis family JHT19_07475 PF00072 Response regulator receiver domain JHT19_07475 PF00158 Sigma-54 interaction domain JHT19_07500 PF01740 STAS domain JHT19_07505 PF01068 ATP dependent DNA ligase domain JHT19_07505 PF14743 DNA ligase OB-like domain JHT19_07515 PF01554 MatE JHT19_07520 PF00677 Lumazine binding domain JHT19_07530 PF03881 Fructosamine kinase JHT19_07535 PF01339 CheB methylesterase JHT19_07535 PF00072 Response regulator receiver domain JHT19_07540 PF00990 Diguanylate cyclase, GGDEF domain JHT19_07540 PF05230 MASE2 domain JHT19_07550 PF00877 NlpC/P60 family JHT19_07555 PF00672 HAMP domain JHT19_07555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT19_07555 PF17202 Single cache domain 3 JHT19_07590 PF03942 DTW domain JHT19_07595 PF00480 ROK family JHT19_07605 PF03454 MoeA C-terminal region (domain IV) JHT19_07605 PF00994 Probable molybdopterin binding domain JHT19_07605 PF03453 MoeA N-terminal region (domain I and II) JHT19_07610 PF12804 MobA-like NTP transferase domain JHT19_07615 PF00005 ABC transporter JHT19_07615 PF08402 TOBE domain JHT19_07620 PF00528 Binding-protein-dependent transport system inner membrane component JHT19_07625 PF12849 PBP superfamily domain JHT19_07630 PF00158 Sigma-54 interaction domain JHT19_07630 PF00072 Response regulator receiver domain JHT19_07630 PF02954 Bacterial regulatory protein, Fis family JHT19_07635 PF00512 His Kinase A (phospho-acceptor) domain JHT19_07635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_07640 PF12848 ABC transporter JHT19_07640 PF00005 ABC transporter JHT19_07645 PF02634 FdhD/NarQ family JHT19_07665 PF02613 Nitrate reductase delta subunit JHT19_07675 PF01568 Molydopterin dinucleotide binding domain JHT19_07675 PF00384 Molybdopterin oxidoreductase JHT19_07675 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JHT19_07680 PF13247 4Fe-4S dicluster domain JHT19_07695 PF03527 RHS protein JHT19_07695 PF05593 RHS Repeat JHT19_07710 PF00909 Ammonium Transporter Family JHT19_07720 PF02146 Sir2 family JHT19_07725 PF13416 Bacterial extracellular solute-binding protein JHT19_07730 PF13416 Bacterial extracellular solute-binding protein JHT19_07735 PF00528 Binding-protein-dependent transport system inner membrane component JHT19_07740 PF00528 Binding-protein-dependent transport system inner membrane component JHT19_07745 PF08402 TOBE domain JHT19_07745 PF00005 ABC transporter JHT19_07765 PF01171 PP-loop family JHT19_07770 PF00582 Universal stress protein family JHT19_07775 PF00027 Cyclic nucleotide-binding domain JHT19_07775 PF13545 Crp-like helix-turn-helix domain JHT19_07800 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JHT19_07800 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP JHT19_07830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_07830 PF00512 His Kinase A (phospho-acceptor) domain JHT19_07830 PF09308 LuxQ, periplasmic JHT19_07830 PF00072 Response regulator receiver domain JHT19_07990 PF05840 Bacteriophage replication gene A protein (GPA) JHT19_08055 PF05707 Zonular occludens toxin (Zot) JHT19_08085 PF06303 MatP N-terminal domain JHT19_08085 PF17414 MatP C-terminal ribbon-helix-helix domain JHT19_08095 PF07977 FabA-like domain JHT19_08100 PF04957 Ribosome modulation factor JHT19_08110 PF00005 ABC transporter JHT19_08110 PF16326 ABC transporter C-terminal domain JHT19_08110 PF12848 ABC transporter JHT19_08120 PF10672 S-adenosylmethionine-dependent methyltransferase JHT19_08120 PF02926 THUMP domain JHT19_08120 PF01170 Putative RNA methylase family UPF0020 JHT19_08125 PF07126 Cell-division protein ZapC JHT19_08130 PF01180 Dihydroorotate dehydrogenase JHT19_08135 PF05088 Bacterial NAD-glutamate dehydrogenase JHT19_08145 PF17432 Domain of unknown function (DUF3458_C) ARM repeats JHT19_08145 PF01433 Peptidase family M1 domain JHT19_08145 PF11940 Domain of unknown function (DUF3458) Ig-like fold JHT19_08155 PF11818 C-terminal domain of tail specific protease (DUF3340) JHT19_08155 PF00595 PDZ domain JHT19_08155 PF03572 Peptidase family S41 JHT19_08155 PF17804 Tail specific protease N-terminal domain JHT19_08165 PF13185 GAF domain JHT19_08170 PF00664 ABC transporter transmembrane region JHT19_08170 PF00005 ABC transporter JHT19_08175 PF04403 Paraquat-inducible protein A JHT19_08205 PF00793 DAHP synthetase I family JHT19_08210 PF04461 Protein of unknown function (DUF520) JHT19_08215 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JHT19_08215 PF10414 Sirohaem synthase dimerisation region JHT19_08215 PF14824 Sirohaem biosynthesis protein central JHT19_08220 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHT19_08225 PF00528 Binding-protein-dependent transport system inner membrane component JHT19_08230 PF00528 Binding-protein-dependent transport system inner membrane component JHT19_08235 PF00005 ABC transporter JHT19_08240 PF01027 Inhibitor of apoptosis-promoting Bax1 JHT19_08250 PF04358 DsrC like protein JHT19_08255 PF00708 Acylphosphatase JHT19_08260 PF02743 Cache domain JHT19_08260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT19_08260 PF00672 HAMP domain JHT19_08265 PF17785 PUA-like domain JHT19_08265 PF10672 S-adenosylmethionine-dependent methyltransferase JHT19_08280 PF05736 OprF membrane domain JHT19_08280 PF00691 OmpA family JHT19_08295 PF00691 OmpA family JHT19_08295 PF05736 OprF membrane domain JHT19_08305 PF00990 Diguanylate cyclase, GGDEF domain JHT19_08305 PF17158 Membrane-associated sensor, integral membrane domain JHT19_08310 PF06508 Queuosine biosynthesis protein QueC JHT19_08315 PF04055 Radical SAM superfamily JHT19_08330 PF00089 Trypsin JHT19_08345 PF04303 PrpF protein JHT19_08350 PF00694 Aconitase C-terminal domain JHT19_08350 PF00330 Aconitase family (aconitate hydratase) JHT19_08355 PF00285 Citrate synthase, C-terminal domain JHT19_08385 PF01970 Tripartite tricarboxylate transporter TctA family JHT19_08390 PF01925 Sulfite exporter TauE/SafE JHT19_08400 PF05844 YopD protein JHT19_08410 PF07720 Tetratricopeptide repeat JHT19_08415 PF04792 V antigen (LcrV) protein JHT19_08420 PF07216 LcrG protein JHT19_08425 PF09621 Type III secretion system regulator (LcrR) JHT19_08430 PF00771 FHIPEP family JHT19_08450 PF09059 TyeA JHT19_08455 PF07201 HrpJ-like domain JHT19_08460 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JHT19_08460 PF02874 ATP synthase alpha/beta family, beta-barrel domain JHT19_08460 PF18269 T3SS EscN ATPase C-terminal domain JHT19_08475 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JHT19_08480 PF00813 FliP family JHT19_08485 PF01313 Bacterial export proteins, family 3 JHT19_08490 PF01311 Bacterial export proteins, family 1 JHT19_08495 PF01312 FlhB HrpN YscU SpaS Family JHT19_08500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_08500 PF03466 LysR substrate binding domain JHT19_08505 PF12146 Serine aminopeptidase, S33 JHT19_08510 PF12146 Serine aminopeptidase, S33 JHT19_08520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_08520 PF03466 LysR substrate binding domain JHT19_08555 PF02661 Fic/DOC family JHT19_08565 PF02108 Flagellar assembly protein FliH JHT19_08575 PF01514 Secretory protein of YscJ/FliF family JHT19_08580 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI JHT19_08590 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) JHT19_08595 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF JHT19_08605 PF16697 Inner membrane component of T3SS, cytoplasmic domain JHT19_08605 PF16693 Inner membrane component of T3SS, periplasmic domain JHT19_08610 PF03958 Bacterial type II/III secretion system short domain JHT19_08610 PF00263 Bacterial type II and III secretion system protein JHT19_08625 PF12833 Helix-turn-helix domain JHT19_08645 PF00171 Aldehyde dehydrogenase family JHT19_08650 PF00158 Sigma-54 interaction domain JHT19_08650 PF02954 Bacterial regulatory protein, Fis family JHT19_08650 PF01590 GAF domain JHT19_08670 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JHT19_08670 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JHT19_08675 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JHT19_08680 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain JHT19_08680 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain JHT19_08685 PF00072 Response regulator receiver domain JHT19_08685 PF12431 Transcriptional regulator JHT19_08690 PF00989 PAS fold JHT19_08690 PF17203 Single cache domain 3 JHT19_08690 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JHT19_08690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_08705 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JHT19_08720 PF03150 Di-haem cytochrome c peroxidase JHT19_08720 PF00034 Cytochrome c JHT19_08725 PF13840 ACT domain JHT19_08725 PF00696 Amino acid kinase family JHT19_08730 PF06339 Ectoine synthase JHT19_08735 PF00202 Aminotransferase class-III JHT19_08740 PF00583 Acetyltransferase (GNAT) family JHT19_08745 PF02028 BCCT, betaine/carnitine/choline family transporter JHT19_08760 PF00005 ABC transporter JHT19_08760 PF00571 CBS domain JHT19_08765 PF00528 Binding-protein-dependent transport system inner membrane component JHT19_08770 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JHT19_08780 PF00501 AMP-binding enzyme JHT19_08800 PF00486 Transcriptional regulatory protein, C terminal JHT19_08800 PF00072 Response regulator receiver domain JHT19_08805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_08805 PF00512 His Kinase A (phospho-acceptor) domain JHT19_08805 PF08521 Two-component sensor kinase N-terminal JHT19_08810 PF00884 Sulfatase JHT19_08835 PF01235 Sodium:alanine symporter family JHT19_08845 PF01810 LysE type translocator JHT19_08850 PF02074 Carboxypeptidase Taq (M32) metallopeptidase JHT19_08885 PF01638 HxlR-like helix-turn-helix JHT19_08895 PF07804 HipA-like C-terminal domain JHT19_08895 PF13657 HipA N-terminal domain JHT19_08905 PF01548 Transposase JHT19_08905 PF02371 Transposase IS116/IS110/IS902 family JHT19_08940 PF13361 UvrD-like helicase C-terminal domain JHT19_08940 PF12462 DNA helicase IV / RNA helicase N terminal JHT19_08940 PF00580 UvrD/REP helicase N-terminal domain JHT19_08985 PF06250 YhcG PDDEXK nuclease domain JHT19_08985 PF17761 DUF1016 N-terminal domain JHT19_09005 PF02384 N-6 DNA Methylase JHT19_09020 PF00717 Peptidase S24-like JHT19_09025 PF11798 IMS family HHH motif JHT19_09025 PF11799 impB/mucB/samB family C-terminal domain JHT19_09025 PF00817 impB/mucB/samB family JHT19_09025 PF13438 Domain of unknown function (DUF4113) JHT19_09055 PF13737 Transposase DDE domain JHT19_09070 PF13408 Recombinase zinc beta ribbon domain JHT19_09070 PF07508 Recombinase JHT19_09070 PF00239 Resolvase, N terminal domain JHT19_09080 PF03279 Bacterial lipid A biosynthesis acyltransferase JHT19_09085 PF13520 Amino acid permease JHT19_09095 PF04204 Homoserine O-succinyltransferase JHT19_09110 PF00990 Diguanylate cyclase, GGDEF domain JHT19_09110 PF03707 Bacterial signalling protein N terminal repeat JHT19_09110 PF00563 EAL domain JHT19_09130 PF00132 Bacterial transferase hexapeptide (six repeats) JHT19_09130 PF12464 Maltose acetyltransferase JHT19_09140 PF01928 CYTH domain JHT19_09150 PF04237 YjbR JHT19_09155 PF01047 MarR family JHT19_09170 PF01411 tRNA synthetases class II (A) JHT19_09170 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JHT19_09170 PF02272 DHHA1 domain JHT19_09180 PF00563 EAL domain JHT19_09180 PF00196 Bacterial regulatory proteins, luxR family JHT19_09185 PF02833 DHHA2 domain JHT19_09185 PF01368 DHH family JHT19_09190 PF00202 Aminotransferase class-III JHT19_09195 PF00171 Aldehyde dehydrogenase family JHT19_09200 PF04371 Porphyromonas-type peptidyl-arginine deiminase JHT19_09205 PF00795 Carbon-nitrogen hydrolase JHT19_09210 PF01266 FAD dependent oxidoreductase JHT19_09215 PF00171 Aldehyde dehydrogenase family JHT19_09220 PF07883 Cupin domain JHT19_09220 PF01381 Helix-turn-helix JHT19_09225 PF07722 Peptidase C26 JHT19_09230 PF00120 Glutamine synthetase, catalytic domain JHT19_09235 PF03553 Na+/H+ antiporter family JHT19_09280 PF00665 Integrase core domain JHT19_09280 PF13276 HTH-like domain JHT19_09280 PF13333 Integrase core domain JHT19_09290 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system JHT19_09295 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system JHT19_09320 PF13737 Transposase DDE domain JHT19_09370 PF13737 Transposase DDE domain JHT19_09425 PF09905 DNA-binding protein VF530 JHT19_09435 PF01810 LysE type translocator JHT19_09450 PF05154 TM2 domain JHT19_09500 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JHT19_09510 PF00293 NUDIX domain JHT19_09510 PF13344 Haloacid dehalogenase-like hydrolase JHT19_09560 PF00583 Acetyltransferase (GNAT) family JHT19_09820 PF00313 'Cold-shock' DNA-binding domain JHT19_09835 PF01042 Endoribonuclease L-PSP JHT19_10010 PF13495 Phage integrase, N-terminal SAM-like domain JHT19_10010 PF00589 Phage integrase family JHT19_10025 PF13302 Acetyltransferase (GNAT) domain JHT19_10030 PF18024 Helix-turn-helix domain JHT19_10030 PF00158 Sigma-54 interaction domain JHT19_10035 PF05128 Domain of unknown function (DUF697) JHT19_10040 PF04317 YcjX-like family, DUF463 JHT19_10055 PF04715 Anthranilate synthase component I, N terminal region JHT19_10055 PF00425 chorismate binding enzyme JHT19_10060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_10060 PF00512 His Kinase A (phospho-acceptor) domain JHT19_10060 PF09308 LuxQ, periplasmic JHT19_10060 PF00072 Response regulator receiver domain JHT19_10070 PF00293 NUDIX domain JHT19_10075 PF03222 Tryptophan/tyrosine permease family JHT19_10080 PF03313 Serine dehydratase alpha chain JHT19_10080 PF03315 Serine dehydratase beta chain JHT19_10085 PF00563 EAL domain JHT19_10085 PF04940 Sensors of blue-light using FAD JHT19_10095 PF01242 6-pyruvoyl tetrahydropterin synthase JHT19_10100 PF02743 Cache domain JHT19_10100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT19_10100 PF00672 HAMP domain JHT19_10105 PF01336 OB-fold nucleic acid binding domain JHT19_10105 PF00152 tRNA synthetases class II (D, K and N) JHT19_10115 PF00392 Bacterial regulatory proteins, gntR family JHT19_10115 PF00155 Aminotransferase class I and II JHT19_10130 PF00155 Aminotransferase class I and II JHT19_10150 PF00672 HAMP domain JHT19_10150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT19_10155 PF02028 BCCT, betaine/carnitine/choline family transporter JHT19_10160 PF01047 MarR family JHT19_10165 PF00196 Bacterial regulatory proteins, luxR family JHT19_10165 PF00072 Response regulator receiver domain JHT19_10170 PF17200 Single Cache domain 2 JHT19_10170 PF07730 Histidine kinase JHT19_10175 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JHT19_10205 PF05951 Bacterial protein of unknown function (DUF882) JHT19_10210 PF03734 L,D-transpeptidase catalytic domain JHT19_10210 PF01471 Putative peptidoglycan binding domain JHT19_10235 PF00925 GTP cyclohydrolase II JHT19_10245 PF03918 Cytochrome C biogenesis protein JHT19_10250 PF08534 Redoxin JHT19_10255 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal JHT19_10255 PF01578 Cytochrome C assembly protein JHT19_10260 PF03916 Polysulphide reductase, NrfD JHT19_10265 PF13247 4Fe-4S dicluster domain JHT19_10275 PF02335 Cytochrome c552 JHT19_10290 PF03989 DNA gyrase C-terminal domain, beta-propeller JHT19_10290 PF00521 DNA gyrase/topoisomerase IV, subunit A JHT19_10300 PF03477 ATP cone domain JHT19_10300 PF02867 Ribonucleotide reductase, barrel domain JHT19_10300 PF00317 Ribonucleotide reductase, all-alpha domain JHT19_10305 PF00268 Ribonucleotide reductase, small chain JHT19_10315 PF00994 Probable molybdopterin binding domain JHT19_10330 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JHT19_10335 PF03435 Saccharopine dehydrogenase NADP binding domain JHT19_10335 PF16653 Saccharopine dehydrogenase C-terminal domain JHT19_10340 PF00202 Aminotransferase class-III JHT19_10375 PF00196 Bacterial regulatory proteins, luxR family JHT19_10375 PF00072 Response regulator receiver domain JHT19_10380 PF00136 DNA polymerase family B JHT19_10380 PF03104 DNA polymerase family B, exonuclease domain JHT19_10390 PF09285 Elongation factor P, C-terminal JHT19_10390 PF01132 Elongation factor P (EF-P) OB domain JHT19_10390 PF08207 Elongation factor P (EF-P) KOW-like domain JHT19_10395 PF04269 Protein of unknown function, DUF440 JHT19_10400 PF00849 RNA pseudouridylate synthase JHT19_10400 PF01479 S4 domain JHT19_10410 PF01300 Telomere recombination JHT19_10415 PF02811 PHP domain JHT19_10420 PF08056 Tryptophan operon leader peptide JHT19_10425 PF04715 Anthranilate synthase component I, N terminal region JHT19_10425 PF00425 chorismate binding enzyme JHT19_10430 PF00117 Glutamine amidotransferase class-I JHT19_10435 PF00591 Glycosyl transferase family, a/b domain JHT19_10435 PF02885 Glycosyl transferase family, helical bundle domain JHT19_10440 PF00218 Indole-3-glycerol phosphate synthase JHT19_10440 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase JHT19_10450 PF00290 Tryptophan synthase alpha chain JHT19_10455 PF00027 Cyclic nucleotide-binding domain JHT19_10455 PF13545 Crp-like helix-turn-helix domain JHT19_10460 PF00501 AMP-binding enzyme JHT19_10460 PF13193 AMP-binding enzyme C-terminal domain JHT19_10465 PF00375 Sodium:dicarboxylate symporter family JHT19_10470 PF17327 Acyl homoserine lactone synthase JHT19_10475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_10475 PF00072 Response regulator receiver domain JHT19_10485 PF04279 Intracellular septation protein A JHT19_10490 PF03061 Thioesterase superfamily JHT19_10495 PF03795 YCII-related domain JHT19_10505 PF01717 Cobalamin-independent synthase, Catalytic domain JHT19_10505 PF08267 Cobalamin-independent synthase, N-terminal domain JHT19_10510 PF03466 LysR substrate binding domain JHT19_10510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_10525 PF01590 GAF domain JHT19_10525 PF00990 Diguanylate cyclase, GGDEF domain JHT19_10525 PF00360 Phytochrome region JHT19_10525 PF00563 EAL domain JHT19_10530 PF04055 Radical SAM superfamily JHT19_10530 PF11842 Domain of unknown function (DUF3362) JHT19_10530 PF08497 Radical SAM N-terminal JHT19_10535 PF00672 HAMP domain JHT19_10535 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT19_10540 PF00072 Response regulator receiver domain JHT19_10540 PF00486 Transcriptional regulatory protein, C terminal JHT19_10545 PF00672 HAMP domain JHT19_10545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_10545 PF00512 His Kinase A (phospho-acceptor) domain JHT19_10575 PF13401 AAA domain JHT19_10575 PF09077 Mu B transposition protein, C terminal JHT19_10600 PF04245 37-kD nucleoid-associated bacterial protein JHT19_10625 PF02810 SEC-C motif JHT19_10800 PF01555 DNA methylase JHT19_10840 PF03466 LysR substrate binding domain JHT19_10840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_10845 PF00529 HlyD membrane-fusion protein of T1SS JHT19_10845 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JHT19_10855 PF01717 Cobalamin-independent synthase, Catalytic domain JHT19_10855 PF08267 Cobalamin-independent synthase, N-terminal domain JHT19_10865 PF02311 AraC-like ligand binding domain JHT19_10865 PF12833 Helix-turn-helix domain JHT19_10870 PF00857 Isochorismatase family JHT19_10875 PF00005 ABC transporter JHT19_10875 PF02687 FtsX-like permease family JHT19_10875 PF12704 MacB-like periplasmic core domain JHT19_10880 PF12704 MacB-like periplasmic core domain JHT19_10880 PF02687 FtsX-like permease family JHT19_10880 PF00005 ABC transporter JHT19_10885 PF00005 ABC transporter JHT19_10885 PF02687 FtsX-like permease family JHT19_10885 PF12704 MacB-like periplasmic core domain JHT19_10895 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JHT19_10910 PF05958 tRNA (Uracil-5-)-methyltransferase JHT19_10910 PF01938 TRAM domain JHT19_10925 PF00085 Thioredoxin JHT19_10930 PF11412 Disulphide bond corrector protein DsbC JHT19_10930 PF02683 Cytochrome C biogenesis protein transmembrane region JHT19_10940 PF03466 LysR substrate binding domain JHT19_10940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_10945 PF00196 Bacterial regulatory proteins, luxR family JHT19_10945 PF00072 Response regulator receiver domain JHT19_10950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_10950 PF00512 His Kinase A (phospho-acceptor) domain JHT19_10955 PF13247 4Fe-4S dicluster domain JHT19_10960 PF03916 Polysulphide reductase, NrfD JHT19_10965 PF01568 Molydopterin dinucleotide binding domain JHT19_10965 PF00384 Molybdopterin oxidoreductase JHT19_10965 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JHT19_10970 PF00034 Cytochrome c JHT19_10975 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JHT19_10980 PF04403 Paraquat-inducible protein A JHT19_10985 PF02470 MlaD protein JHT19_10995 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase JHT19_11005 PF00535 Glycosyl transferase family 2 JHT19_11010 PF01370 NAD dependent epimerase/dehydratase family JHT19_11020 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JHT19_11025 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JHT19_11030 PF18073 Rubredoxin metal binding domain JHT19_11035 PF06305 Lipopolysaccharide assembly protein A domain JHT19_11040 PF00216 Bacterial DNA-binding protein JHT19_11045 PF00575 S1 RNA binding domain JHT19_11050 PF02224 Cytidylate kinase JHT19_11055 PF01343 Peptidase family S49 JHT19_11055 PF08496 Peptidase family S49 N-terminal JHT19_11060 PF00106 short chain dehydrogenase JHT19_11075 PF14579 Helix-hairpin-helix motif JHT19_11075 PF07733 Bacterial DNA polymerase III alpha NTPase domain JHT19_11075 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JHT19_11075 PF01336 OB-fold nucleic acid binding domain JHT19_11075 PF02811 PHP domain JHT19_11080 PF01584 CheW-like domain JHT19_11080 PF00072 Response regulator receiver domain JHT19_11085 PF00480 ROK family JHT19_11095 PF01734 Patatin-like phospholipase JHT19_11110 PF00209 Sodium:neurotransmitter symporter family JHT19_11125 PF02378 Phosphotransferase system, EIIC JHT19_11125 PF00367 phosphotransferase system, EIIB JHT19_11130 PF01026 TatD related DNase JHT19_11135 PF09115 DNA polymerase III, delta subunit, C terminal JHT19_11140 PF02223 Thymidylate kinase JHT19_11145 PF02618 YceG-like family JHT19_11150 PF01063 Amino-transferase class IV JHT19_11155 PF02801 Beta-ketoacyl synthase, C-terminal domain JHT19_11155 PF00109 Beta-ketoacyl synthase, N-terminal domain JHT19_11160 PF00550 Phosphopantetheine attachment site JHT19_11170 PF00698 Acyl transferase domain JHT19_11175 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JHT19_11175 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JHT19_11180 PF02504 Fatty acid synthesis protein JHT19_11185 PF01783 Ribosomal L32p protein family JHT19_11190 PF02620 Large ribosomal RNA subunit accumulation protein YceD JHT19_11195 PF02545 Maf-like protein JHT19_11200 PF01479 S4 domain JHT19_11200 PF00849 RNA pseudouridylate synthase JHT19_11205 PF10150 Ribonuclease E/G family JHT19_11205 PF00575 S1 RNA binding domain JHT19_11205 PF12111 Polyribonucleotide phosphorylase C terminal JHT19_11210 PF00916 Sulfate permease family JHT19_11210 PF01740 STAS domain JHT19_11215 PF01451 Low molecular weight phosphotyrosine protein phosphatase JHT19_11220 PF12557 Cob(I)alamin adenosyltransferase N terminal JHT19_11220 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP JHT19_11230 PF00485 Phosphoribulokinase / Uridine kinase family JHT19_11235 PF10609 NUBPL iron-transfer P-loop NTPase JHT19_11240 PF09334 tRNA synthetases class I (M) JHT19_11240 PF01588 Putative tRNA binding domain JHT19_11250 PF00392 Bacterial regulatory proteins, gntR family JHT19_11250 PF07840 FadR C-terminal domain JHT19_11255 PF06450 Bacterial Na+/H+ antiporter B (NhaB) JHT19_11260 PF02600 Disulfide bond formation protein DsbB JHT19_11265 PF03695 Uncharacterised protein family (UPF0149) JHT19_11265 PF02810 SEC-C motif JHT19_11270 PF01207 Dihydrouridine synthase (Dus) JHT19_11275 PF00990 Diguanylate cyclase, GGDEF domain JHT19_11275 PF00072 Response regulator receiver domain JHT19_11280 PF02903 Alpha amylase, N-terminal ig-like domain JHT19_11280 PF00128 Alpha amylase, catalytic domain JHT19_11285 PF00005 ABC transporter JHT19_11290 PF02653 Branched-chain amino acid transport system / permease component JHT19_11300 PF04217 Protein of unknown function, DUF412 JHT19_11305 PF00871 Acetokinase family JHT19_11310 PF07085 DRTGG domain JHT19_11310 PF01515 Phosphate acetyl/butaryl transferase JHT19_11315 PF13194 Domain of unknown function (DUF4010) JHT19_11325 PF13409 Glutathione S-transferase, N-terminal domain JHT19_11330 PF00005 ABC transporter JHT19_11330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JHT19_11335 PF00005 ABC transporter JHT19_11335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JHT19_11340 PF00528 Binding-protein-dependent transport system inner membrane component JHT19_11340 PF12911 N-terminal TM domain of oligopeptide transport permease C JHT19_11345 PF00528 Binding-protein-dependent transport system inner membrane component JHT19_11350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JHT19_11355 PF02391 MoaE protein JHT19_11360 PF02597 ThiS family JHT19_11365 PF01967 MoaC family JHT19_11370 PF00994 Probable molybdopterin binding domain JHT19_11375 PF04055 Radical SAM superfamily JHT19_11375 PF06463 Molybdenum Cofactor Synthesis C JHT19_11380 PF01933 Uncharacterised protein family UPF0052 JHT19_11385 PF01627 Hpt domain JHT19_11390 PF02954 Bacterial regulatory protein, Fis family JHT19_11390 PF00072 Response regulator receiver domain JHT19_11390 PF00158 Sigma-54 interaction domain JHT19_11395 PF12344 Ultra-violet resistance protein B JHT19_11395 PF00271 Helicase conserved C-terminal domain JHT19_11395 PF04851 Type III restriction enzyme, res subunit JHT19_11395 PF02151 UvrB/uvrC motif JHT19_11395 PF17757 UvrB interaction domain JHT19_11405 PF02508 Rnf-Nqr subunit, membrane protein JHT19_11410 PF04060 Putative Fe-S cluster JHT19_11415 PF10531 SLBB domain JHT19_11415 PF13375 RnfC Barrel sandwich hybrid domain JHT19_11415 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JHT19_11415 PF12838 4Fe-4S dicluster domain JHT19_11420 PF03116 NQR2, RnfD, RnfE family JHT19_11430 PF02508 Rnf-Nqr subunit, membrane protein JHT19_11435 PF00730 HhH-GPD superfamily base excision DNA repair protein JHT19_11435 PF00633 Helix-hairpin-helix motif JHT19_11435 PF10576 Iron-sulfur binding domain of endonuclease III JHT19_11440 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JHT19_11445 PF10952 Protein of unknown function (DUF2753) JHT19_11450 PF18393 MotY N-terminal domain JHT19_11450 PF00691 OmpA family JHT19_11455 PF00929 Exonuclease JHT19_11460 PF13726 Na+-H+ antiporter family JHT19_11460 PF03553 Na+/H+ antiporter family JHT19_11470 PF00462 Glutaredoxin JHT19_11475 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JHT19_11475 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JHT19_11490 PF00171 Aldehyde dehydrogenase family JHT19_11490 PF00465 Iron-containing alcohol dehydrogenase JHT19_11495 PF01914 MarC family integral membrane protein JHT19_11500 PF00027 Cyclic nucleotide-binding domain JHT19_11500 PF00520 Ion transport protein JHT19_11505 PF01118 Semialdehyde dehydrogenase, NAD binding domain JHT19_11505 PF02774 Semialdehyde dehydrogenase, dimerisation domain JHT19_11510 PF03553 Na+/H+ antiporter family JHT19_11525 PF04245 37-kD nucleoid-associated bacterial protein JHT19_11530 PF07208 Protein of unknown function (DUF1414) JHT19_11535 PF11893 Domain of unknown function (DUF3413) JHT19_11535 PF00884 Sulfatase JHT19_11545 PF00589 Phage integrase family JHT19_11545 PF14659 Phage integrase, N-terminal SAM-like domain JHT19_11580 PF00589 Phage integrase family JHT19_11580 PF14659 Phage integrase, N-terminal SAM-like domain JHT19_11610 PF00850 Histone deacetylase domain JHT19_11615 PF00106 short chain dehydrogenase JHT19_11625 PF01131 DNA topoisomerase JHT19_11625 PF01751 Toprim domain JHT19_11630 PF00881 Nitroreductase family JHT19_11635 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHT19_11635 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JHT19_11640 PF01343 Peptidase family S49 JHT19_11645 PF17763 Glutaminase/Asparaginase C-terminal domain JHT19_11645 PF00710 Asparaginase, N-terminal JHT19_11650 PF07023 Protein of unknown function (DUF1315) JHT19_11660 PF01641 SelR domain JHT19_11665 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JHT19_11665 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JHT19_11670 PF01263 Aldose 1-epimerase JHT19_11675 PF02743 Cache domain JHT19_11675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT19_11675 PF00672 HAMP domain JHT19_11680 PF13847 Methyltransferase domain JHT19_11695 PF00245 Alkaline phosphatase JHT19_11705 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JHT19_11710 PF03992 Antibiotic biosynthesis monooxygenase JHT19_11715 PF00924 Mechanosensitive ion channel JHT19_11715 PF05552 Conserved TM helix JHT19_11720 PF03692 Putative zinc- or iron-chelating domain JHT19_11725 PF04226 Transglycosylase associated protein JHT19_11730 PF03692 Putative zinc- or iron-chelating domain JHT19_11740 PF03313 Serine dehydratase alpha chain JHT19_11745 PF01042 Endoribonuclease L-PSP JHT19_11755 PF00230 Major intrinsic protein JHT19_11760 PF02132 RecR protein JHT19_11760 PF13662 Toprim domain JHT19_11765 PF02575 YbaB/EbfC DNA-binding family JHT19_11770 PF12170 DNA polymerase III tau subunit V interacting with alpha JHT19_11770 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding JHT19_11770 PF12169 DNA polymerase III subunits gamma and tau domain III JHT19_11775 PF00156 Phosphoribosyl transferase domain JHT19_11780 PF04304 Protein of unknown function (DUF454) JHT19_11785 PF00072 Response regulator receiver domain JHT19_11790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_11790 PF03466 LysR substrate binding domain JHT19_11795 PF00156 Phosphoribosyl transferase domain JHT19_11800 PF02674 Colicin V production protein JHT19_11805 PF05036 Sporulation related domain JHT19_11810 PF02875 Mur ligase family, glutamate ligase domain JHT19_11810 PF08245 Mur ligase middle domain JHT19_11815 PF01039 Carboxyl transferase domain JHT19_11815 PF17848 Acetyl-coA carboxylase zinc finger domain JHT19_11820 PF01416 tRNA pseudouridine synthase JHT19_11830 PF01118 Semialdehyde dehydrogenase, NAD binding domain JHT19_11830 PF02774 Semialdehyde dehydrogenase, dimerisation domain JHT19_11835 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JHT19_11835 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JHT19_11835 PF11890 Domain of unknown function (DUF3410) JHT19_11840 PF00109 Beta-ketoacyl synthase, N-terminal domain JHT19_11840 PF02801 Beta-ketoacyl synthase, C-terminal domain JHT19_11845 PF01266 FAD dependent oxidoreductase JHT19_11845 PF05430 S-adenosyl-L-methionine-dependent methyltransferase JHT19_11855 PF08891 YfcL protein JHT19_11860 PF04315 Elongation factor P hydroxylase JHT19_11865 PF03458 UPF0126 domain JHT19_11870 PF01264 Chorismate synthase JHT19_11875 PF05175 Methyltransferase small domain JHT19_11880 PF01713 Smr domain JHT19_11885 PF00300 Histidine phosphatase superfamily (branch 1) JHT19_11890 PF05193 Peptidase M16 inactive domain JHT19_11890 PF16187 Middle or third domain of peptidase_M16 JHT19_11890 PF00675 Insulinase (Peptidase family M16) JHT19_11900 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JHT19_11900 PF00378 Enoyl-CoA hydratase/isomerase JHT19_11900 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JHT19_11905 PF02803 Thiolase, C-terminal domain JHT19_11905 PF00108 Thiolase, N-terminal domain JHT19_11910 PF04542 Sigma-70 region 2 JHT19_11910 PF08281 Sigma-70, region 4 JHT19_11920 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) JHT19_11925 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) JHT19_11930 PF04333 MlaA lipoprotein JHT19_11940 PF03918 Cytochrome C biogenesis protein JHT19_11945 PF08534 Redoxin JHT19_11955 PF03100 CcmE JHT19_11960 PF04995 Heme exporter protein D (CcmD) JHT19_11965 PF01578 Cytochrome C assembly protein JHT19_11970 PF03379 CcmB protein JHT19_11975 PF00005 ABC transporter JHT19_11985 PF01584 CheW-like domain JHT19_11995 PF13614 AAA domain JHT19_12000 PF01339 CheB methylesterase JHT19_12000 PF00072 Response regulator receiver domain JHT19_12005 PF01584 CheW-like domain JHT19_12005 PF00072 Response regulator receiver domain JHT19_12005 PF01627 Hpt domain JHT19_12005 PF02895 Signal transducing histidine kinase, homodimeric domain JHT19_12005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_12010 PF04344 Chemotaxis phosphatase, CheZ JHT19_12015 PF00072 Response regulator receiver domain JHT19_12020 PF04542 Sigma-70 region 2 JHT19_12020 PF04539 Sigma-70 region 3 JHT19_12020 PF04545 Sigma-70, region 4 JHT19_12025 PF10609 NUBPL iron-transfer P-loop NTPase JHT19_12030 PF00448 SRP54-type protein, GTPase domain JHT19_12040 PF01312 FlhB HrpN YscU SpaS Family JHT19_12045 PF01311 Bacterial export proteins, family 1 JHT19_12050 PF01313 Bacterial export proteins, family 3 JHT19_12055 PF00813 FliP family JHT19_12060 PF04347 Flagellar biosynthesis protein, FliO JHT19_12065 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JHT19_12070 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JHT19_12070 PF02154 Flagellar motor switch protein FliM JHT19_12090 PF18269 T3SS EscN ATPase C-terminal domain JHT19_12090 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JHT19_12100 PF14842 FliG N-terminal domain JHT19_12100 PF14841 FliG middle domain JHT19_12100 PF01706 FliG C-terminal domain JHT19_12105 PF01514 Secretory protein of YscJ/FliF family JHT19_12105 PF08345 Flagellar M-ring protein C-terminal JHT19_12110 PF02049 Flagellar hook-basal body complex protein FliE JHT19_12115 PF02954 Bacterial regulatory protein, Fis family JHT19_12115 PF00158 Sigma-54 interaction domain JHT19_12115 PF00072 Response regulator receiver domain JHT19_12120 PF00512 His Kinase A (phospho-acceptor) domain JHT19_12120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_12120 PF13188 PAS domain JHT19_12125 PF06490 Flagellar regulatory protein FleQ JHT19_12125 PF02954 Bacterial regulatory protein, Fis family JHT19_12125 PF00158 Sigma-54 interaction domain JHT19_12130 PF02561 Flagellar protein FliS JHT19_12140 PF07196 Flagellin hook IN motif JHT19_12140 PF07195 Flagellar hook-associated protein 2 C-terminus JHT19_12140 PF02465 Flagellar hook-associated protein 2 N-terminus JHT19_12145 PF03646 FlaG protein JHT19_12150 PF00700 Bacterial flagellin C-terminal helical region JHT19_12150 PF07196 Flagellin hook IN motif JHT19_12150 PF00669 Bacterial flagellin N-terminal helical region JHT19_12155 PF00669 Bacterial flagellin N-terminal helical region JHT19_12155 PF07196 Flagellin hook IN motif JHT19_12155 PF00700 Bacterial flagellin C-terminal helical region JHT19_12160 PF00700 Bacterial flagellin C-terminal helical region JHT19_12160 PF00669 Bacterial flagellin N-terminal helical region JHT19_12160 PF07196 Flagellin hook IN motif JHT19_12165 PF04261 Dyp-type peroxidase family JHT19_12170 PF11143 Protein of unknown function (DUF2919) JHT19_12190 PF03960 ArsC family JHT19_12195 PF01546 Peptidase family M20/M25/M40 JHT19_12195 PF07687 Peptidase dimerisation domain JHT19_12210 PF06804 NlpB/DapX lipoprotein JHT19_12215 PF00701 Dihydrodipicolinate synthetase family JHT19_12220 PF01842 ACT domain JHT19_12225 PF00578 AhpC/TSA family JHT19_12230 PF01594 AI-2E family transporter JHT19_12240 PF01435 Peptidase family M48 JHT19_12240 PF13181 Tetratricopeptide repeat JHT19_12245 PF03960 ArsC family JHT19_12250 PF03358 NADPH-dependent FMN reductase JHT19_12265 PF00860 Permease family JHT19_12275 PF00586 AIR synthase related protein, N-terminal domain JHT19_12275 PF02769 AIR synthase related protein, C-terminal domain JHT19_12280 PF00551 Formyl transferase JHT19_12285 PF13230 Glutamine amidotransferases class-II JHT19_12290 PF13580 SIS domain JHT19_12295 PF02770 Acyl-CoA dehydrogenase, middle domain JHT19_12295 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JHT19_12295 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JHT19_12295 PF09317 Domain of unknown function (DUF1974) JHT19_12300 PF00916 Sulfate permease family JHT19_12300 PF01740 STAS domain JHT19_12325 PF00929 Exonuclease JHT19_12330 PF00075 RNase H JHT19_12335 PF08241 Methyltransferase domain JHT19_12340 PF00753 Metallo-beta-lactamase superfamily JHT19_12340 PF16123 Hydroxyacylglutathione hydrolase C-terminus JHT19_12345 PF01476 LysM domain JHT19_12345 PF01464 Transglycosylase SLT domain JHT19_12355 PF03372 Endonuclease/Exonuclease/phosphatase family JHT19_12360 PF00543 Nitrogen regulatory protein P-II JHT19_12365 PF00034 Cytochrome c JHT19_12370 PF11734 TilS substrate C-terminal domain JHT19_12370 PF09179 TilS substrate binding domain JHT19_12370 PF01171 PP-loop family JHT19_12375 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JHT19_12380 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JHT19_12380 PF14579 Helix-hairpin-helix motif JHT19_12380 PF02811 PHP domain JHT19_12380 PF07733 Bacterial DNA polymerase III alpha NTPase domain JHT19_12380 PF01336 OB-fold nucleic acid binding domain JHT19_12385 PF01351 Ribonuclease HII JHT19_12390 PF02684 Lipid-A-disaccharide synthetase JHT19_12395 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 JHT19_12395 PF00132 Bacterial transferase hexapeptide (six repeats) JHT19_12400 PF07977 FabA-like domain JHT19_12405 PF00132 Bacterial transferase hexapeptide (six repeats) JHT19_12405 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD JHT19_12410 PF03938 Outer membrane protein (OmpH-like) JHT19_12415 PF01103 Surface antigen JHT19_12415 PF07244 Surface antigen variable number repeat JHT19_12420 PF02163 Peptidase family M50 JHT19_12420 PF17820 PDZ domain JHT19_12425 PF13288 DXP reductoisomerase C-terminal domain JHT19_12425 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JHT19_12425 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JHT19_12435 PF01255 Putative undecaprenyl diphosphate synthase JHT19_12440 PF01765 Ribosome recycling factor JHT19_12450 PF00889 Elongation factor TS JHT19_12455 PF00318 Ribosomal protein S2 JHT19_12460 PF00557 Metallopeptidase family M24 JHT19_12465 PF01842 ACT domain JHT19_12465 PF08335 GlnD PII-uridylyltransferase JHT19_12465 PF01966 HD domain JHT19_12465 PF01909 Nucleotidyltransferase domain JHT19_12470 PF11944 Protein of unknown function (DUF3461) JHT19_12475 PF00849 RNA pseudouridylate synthase JHT19_12480 PF04287 tRNA pseudouridine synthase C JHT19_12505 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 JHT19_12510 PF03806 AbgT putative transporter family JHT19_12515 PF00444 Ribosomal protein L36 JHT19_12520 PF01197 Ribosomal protein L31 JHT19_12525 PF18389 TrmO C-terminal domain JHT19_12525 PF01980 tRNA-methyltransferase O JHT19_12530 PF04073 Aminoacyl-tRNA editing domain JHT19_12530 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JHT19_12530 PF03129 Anticodon binding domain JHT19_12540 PF06786 Uncharacterised protein family (UPF0253) JHT19_12550 PF00209 Sodium:neurotransmitter symporter family JHT19_12565 PF01272 Transcription elongation factor, GreA/GreB, C-term JHT19_12565 PF03449 Transcription elongation factor, N-terminal JHT19_12570 PF09382 RQC domain JHT19_12570 PF00270 DEAD/DEAH box helicase JHT19_12570 PF00271 Helicase conserved C-terminal domain JHT19_12570 PF00570 HRDC domain JHT19_12570 PF16124 RecQ zinc-binding JHT19_12575 PF00817 impB/mucB/samB family JHT19_12575 PF11799 impB/mucB/samB family C-terminal domain JHT19_12575 PF11798 IMS family HHH motif JHT19_12595 PF00111 2Fe-2S iron-sulfur cluster binding domain JHT19_12595 PF00175 Oxidoreductase NAD-binding domain JHT19_12595 PF00970 Oxidoreductase FAD-binding domain JHT19_12600 PF02508 Rnf-Nqr subunit, membrane protein JHT19_12605 PF02508 Rnf-Nqr subunit, membrane protein JHT19_12610 PF04205 FMN-binding domain JHT19_12625 PF01722 BolA-like protein JHT19_12630 PF05175 Methyltransferase small domain JHT19_12635 PF03923 Uncharacterized lipoprotein JHT19_12635 PF08139 Prokaryotic membrane lipoprotein lipid attachment site JHT19_12640 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JHT19_12645 PF07690 Major Facilitator Superfamily JHT19_12655 PF04542 Sigma-70 region 2 JHT19_12655 PF04545 Sigma-70, region 4 JHT19_12675 PF03502 Nucleoside-specific channel-forming protein, Tsx JHT19_12680 PF02558 Ketopantoate reductase PanE/ApbA JHT19_12680 PF08546 Ketopantoate reductase PanE/ApbA C terminal JHT19_12685 PF01965 DJ-1/PfpI family JHT19_12690 PF00266 Aminotransferase class-V JHT19_12695 PF00990 Diguanylate cyclase, GGDEF domain JHT19_12695 PF17158 Membrane-associated sensor, integral membrane domain JHT19_12700 PF02657 Fe-S metabolism associated domain JHT19_12705 PF00899 ThiF family JHT19_12710 PF06725 3D domain JHT19_12710 PF03562 MltA specific insert domain JHT19_12720 PF00696 Amino acid kinase family JHT19_12720 PF00583 Acetyltransferase (GNAT) family JHT19_12730 PF13538 UvrD-like helicase C-terminal domain JHT19_12735 PF12705 PD-(D/E)XK nuclease superfamily JHT19_12735 PF00580 UvrD/REP helicase N-terminal domain JHT19_12735 PF13361 UvrD-like helicase C-terminal domain JHT19_12740 PF17946 RecC C-terminal domain JHT19_12745 PF11893 Domain of unknown function (DUF3413) JHT19_12745 PF00884 Sulfatase JHT19_12755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_12755 PF03466 LysR substrate binding domain JHT19_12760 PF07130 YebG protein JHT19_12765 PF14602 Hexapeptide repeat of succinyl-transferase JHT19_12765 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle JHT19_12770 PF03009 Glycerophosphoryl diester phosphodiesterase family JHT19_12775 PF07690 Major Facilitator Superfamily JHT19_12780 PF00230 Major intrinsic protein JHT19_12785 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JHT19_12785 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JHT19_12790 PF00455 DeoR C terminal sensor domain JHT19_12790 PF08220 DeoR-like helix-turn-helix domain JHT19_12795 PF01266 FAD dependent oxidoreductase JHT19_12795 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JHT19_12800 PF01544 CorA-like Mg2+ transporter protein JHT19_12815 PF01588 Putative tRNA binding domain JHT19_12820 PF00356 Bacterial regulatory proteins, lacI family JHT19_12835 PF00356 Bacterial regulatory proteins, lacI family JHT19_12840 PF01263 Aldose 1-epimerase JHT19_12845 PF00288 GHMP kinases N terminal domain JHT19_12845 PF08544 GHMP kinases C terminal JHT19_12845 PF10509 Galactokinase galactose-binding signature JHT19_12850 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain JHT19_12850 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain JHT19_12860 PF00356 Bacterial regulatory proteins, lacI family JHT19_12865 PF02929 Beta galactosidase small chain JHT19_12865 PF16353 Domain of unknown function(DUF4981) JHT19_12865 PF00703 Glycosyl hydrolases family 2 JHT19_12865 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JHT19_12865 PF02837 Glycosyl hydrolases family 2, sugar binding domain JHT19_12870 PF04074 YhcH/YjgK/YiaL JHT19_12875 PF13520 Amino acid permease JHT19_12880 PF03466 LysR substrate binding domain JHT19_12880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_12910 PF00437 Type II/IV secretion system protein JHT19_12940 PF13629 Pilus formation protein N terminal region JHT19_12940 PF00263 Bacterial type II and III secretion system protein JHT19_12940 PF04972 BON domain JHT19_12965 PF12833 Helix-turn-helix domain JHT19_12965 PF02805 Metal binding domain of Ada JHT19_12970 PF00501 AMP-binding enzyme JHT19_12980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_12980 PF03466 LysR substrate binding domain JHT19_12985 PF03144 Elongation factor Tu domain 2 JHT19_12985 PF00679 Elongation factor G C-terminus JHT19_12985 PF14492 Elongation Factor G, domain II JHT19_12985 PF03764 Elongation factor G, domain IV JHT19_12985 PF00009 Elongation factor Tu GTP binding domain JHT19_12990 PF18073 Rubredoxin metal binding domain JHT19_13000 PF18429 Domain of unknown function (DUF5609) JHT19_13010 PF01048 Phosphorylase superfamily JHT19_13015 PF01676 Metalloenzyme superfamily JHT19_13020 PF02885 Glycosyl transferase family, helical bundle domain JHT19_13020 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain JHT19_13020 PF00591 Glycosyl transferase family, a/b domain JHT19_13025 PF01791 DeoC/LacD family aldolase JHT19_13030 PF01773 Na+ dependent nucleoside transporter N-terminus JHT19_13030 PF07670 Nucleoside recognition JHT19_13030 PF07662 Na+ dependent nucleoside transporter C-terminus JHT19_13035 PF01026 TatD related DNase JHT19_13045 PF00009 Elongation factor Tu GTP binding domain JHT19_13045 PF16658 Class II release factor RF3, C-terminal domain JHT19_13045 PF03144 Elongation factor Tu domain 2 JHT19_13050 PF01381 Helix-turn-helix JHT19_13050 PF00717 Peptidase S24-like JHT19_13095 PF06122 Conjugative relaxosome accessory transposon protein JHT19_13110 PF14490 Helix-hairpin-helix containing domain JHT19_13110 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain JHT19_13110 PF13538 UvrD-like helicase C-terminal domain JHT19_13115 PF12728 Helix-turn-helix domain JHT19_13135 PF04002 RadC-like JAB domain JHT19_13140 PF00092 von Willebrand factor type A domain JHT19_13160 PF08406 CbbQ/NirQ/NorQ C-terminal JHT19_13160 PF07728 AAA domain (dynein-related subfamily) JHT19_13180 PF00436 Single-strand binding protein family JHT19_13220 PF00004 ATPase family associated with various cellular activities (AAA) JHT19_13220 PF07724 AAA domain (Cdc48 subfamily) JHT19_13220 PF17871 AAA lid domain JHT19_13220 PF02861 Clp amino terminal domain, pathogenicity island component JHT19_13220 PF10431 C-terminal, D2-small domain, of ClpB protein JHT19_13255 PF06834 TraU protein JHT19_13265 PF10502 Signal peptidase, peptidase S26 JHT19_13280 PF10411 Disulfide bond isomerase protein N-terminus JHT19_13280 PF13098 Thioredoxin-like domain JHT19_13410 PF02811 PHP domain JHT19_13410 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JHT19_13410 PF14579 Helix-hairpin-helix motif JHT19_13410 PF07733 Bacterial DNA polymerase III alpha NTPase domain JHT19_13410 PF00929 Exonuclease JHT19_13410 PF11490 DNA polymerase III polC-type N-terminus II JHT19_13415 PF00717 Peptidase S24-like JHT19_13420 PF11799 impB/mucB/samB family C-terminal domain JHT19_13420 PF13438 Domain of unknown function (DUF4113) JHT19_13420 PF00817 impB/mucB/samB family JHT19_13475 PF13508 Acetyltransferase (GNAT) domain JHT19_13480 PF02036 SCP-2 sterol transfer family JHT19_13485 PF00563 EAL domain JHT19_13485 PF00990 Diguanylate cyclase, GGDEF domain JHT19_13485 PF03707 Bacterial signalling protein N terminal repeat JHT19_13490 PF01136 Peptidase family U32 JHT19_13495 PF01136 Peptidase family U32 JHT19_13500 PF01554 MatE JHT19_13510 PF07719 Tetratricopeptide repeat JHT19_13510 PF13181 Tetratricopeptide repeat JHT19_13515 PF00013 KH domain JHT19_13515 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JHT19_13515 PF01138 3' exoribonuclease family, domain 1 JHT19_13515 PF03725 3' exoribonuclease family, domain 2 JHT19_13515 PF00575 S1 RNA binding domain JHT19_13520 PF00312 Ribosomal protein S15 JHT19_13525 PF09157 Pseudouridine synthase II TruB, C-terminal JHT19_13525 PF16198 tRNA pseudouridylate synthase B C-terminal domain JHT19_13525 PF01509 TruB family pseudouridylate synthase (N terminal domain) JHT19_13530 PF02033 Ribosome-binding factor A JHT19_13535 PF04760 Translation initiation factor IF-2, N-terminal region JHT19_13535 PF00009 Elongation factor Tu GTP binding domain JHT19_13535 PF11987 Translation-initiation factor 2 JHT19_13535 PF08364 Bacterial translation initiation factor IF-2 associated region JHT19_13540 PF08529 NusA N-terminal domain JHT19_13540 PF13184 NusA-like KH domain JHT19_13540 PF00575 S1 RNA binding domain JHT19_13545 PF02576 RimP N-terminal domain JHT19_13545 PF17384 RimP C-terminal SH3 domain JHT19_13560 PF03840 Preprotein translocase SecG subunit JHT19_13565 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JHT19_13565 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JHT19_13565 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JHT19_13565 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JHT19_13570 PF00809 Pterin binding enzyme JHT19_13575 PF01434 Peptidase family M41 JHT19_13575 PF06480 FtsH Extracellular JHT19_13575 PF17862 AAA+ lid domain JHT19_13575 PF00004 ATPase family associated with various cellular activities (AAA) JHT19_13580 PF01728 FtsJ-like methyltransferase JHT19_13585 PF01985 CRS1 / YhbY (CRM) domain JHT19_13590 PF01272 Transcription elongation factor, GreA/GreB, C-term JHT19_13590 PF03449 Transcription elongation factor, N-terminal JHT19_13595 PF13609 Gram-negative porin JHT19_13600 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family JHT19_13610 PF00579 tRNA synthetases class I (W and Y) JHT19_13615 PF08525 Opacity-associated protein A N-terminal motif JHT19_13615 PF01551 Peptidase family M23 JHT19_13615 PF01476 LysM domain JHT19_13625 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JHT19_13630 PF01521 Iron-sulphur cluster biosynthesis JHT19_13635 PF00202 Aminotransferase class-III JHT19_13640 PF01594 AI-2E family transporter JHT19_13645 PF08468 Methyltransferase small domain N-terminal JHT19_13645 PF05175 Methyltransferase small domain JHT19_13650 PF00512 His Kinase A (phospho-acceptor) domain JHT19_13650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_13650 PF00072 Response regulator receiver domain JHT19_13650 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHT19_13655 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JHT19_13660 PF00528 Binding-protein-dependent transport system inner membrane component JHT19_13665 PF00528 Binding-protein-dependent transport system inner membrane component JHT19_13665 PF12911 N-terminal TM domain of oligopeptide transport permease C JHT19_13670 PF00005 ABC transporter JHT19_13670 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JHT19_13675 PF00005 ABC transporter JHT19_13675 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JHT19_13685 PF01869 BadF/BadG/BcrA/BcrD ATPase family JHT19_13690 PF00728 Glycosyl hydrolase family 20, catalytic domain JHT19_13690 PF02838 Glycosyl hydrolase family 20, domain 2 JHT19_13695 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain JHT19_13695 PF06165 Glycosyltransferase family 36 JHT19_13700 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JHT19_13700 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JHT19_13700 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JHT19_13700 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JHT19_13715 PF13416 Bacterial extracellular solute-binding protein JHT19_13720 PF00909 Ammonium Transporter Family JHT19_13725 PF00543 Nitrogen regulatory protein P-II JHT19_13730 PF06062 Uncharacterised protein family (UPF0231) JHT19_13735 PF00330 Aconitase family (aconitate hydratase) JHT19_13735 PF06434 Aconitate hydratase 2 N-terminus JHT19_13735 PF11791 Aconitate B N-terminal domain JHT19_13745 PF14814 Bifunctional transglycosylase second domain JHT19_13745 PF00912 Transglycosylase JHT19_13745 PF00905 Penicillin binding protein transpeptidase domain JHT19_13750 PF04408 Helicase associated domain (HA2) JHT19_13750 PF00271 Helicase conserved C-terminal domain JHT19_13750 PF00270 DEAD/DEAH box helicase JHT19_13750 PF08482 ATP-dependent helicase C-terminal JHT19_13755 PF03749 Sugar fermentation stimulation protein RE domain JHT19_13755 PF17746 SfsA N-terminal OB domain JHT19_13760 PF01258 Prokaryotic dksA/traR C4-type zinc finger JHT19_13765 PF00749 tRNA synthetases class I (E and Q), catalytic domain JHT19_13770 PF01743 Poly A polymerase head domain JHT19_13770 PF12627 Probable RNA and SrmB- binding site of polymerase A JHT19_13770 PF12626 Polymerase A arginine-rich C-terminus JHT19_13775 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JHT19_13780 PF02548 Ketopantoate hydroxymethyltransferase JHT19_13785 PF02569 Pantoate-beta-alanine ligase JHT19_13790 PF03279 Bacterial lipid A biosynthesis acyltransferase JHT19_13795 PF01061 ABC-2 type transporter JHT19_13800 PF00005 ABC transporter JHT19_13805 PF01740 STAS domain JHT19_13805 PF00916 Sulfate permease family JHT19_13810 PF00484 Carbonic anhydrase JHT19_13815 PF00156 Phosphoribosyl transferase domain JHT19_13820 PF00440 Bacterial regulatory proteins, tetR family JHT19_13825 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHT19_13825 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JHT19_13830 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JHT19_13830 PF00364 Biotin-requiring enzyme JHT19_13830 PF02817 e3 binding domain JHT19_13835 PF17831 Pyruvate dehydrogenase E1 component middle domain JHT19_13835 PF00456 Transketolase, thiamine diphosphate binding domain JHT19_13840 PF00392 Bacterial regulatory proteins, gntR family JHT19_13840 PF07729 FCD domain JHT19_13845 PF01510 N-acetylmuramoyl-L-alanine amidase JHT19_13850 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JHT19_13850 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JHT19_13855 PF07963 Prokaryotic N-terminal methylation motif JHT19_13855 PF00114 Pilin (bacterial filament) JHT19_13860 PF00437 Type II/IV secretion system protein JHT19_13860 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JHT19_13865 PF00482 Type II secretion system (T2SS), protein F JHT19_13870 PF01478 Type IV leader peptidase family JHT19_13870 PF06750 Bacterial Peptidase A24 N-terminal domain JHT19_13875 PF01121 Dephospho-CoA kinase JHT19_13880 PF07072 Cell division protein JHT19_13885 PF03884 DNA gyrase inhibitor YacG JHT19_13890 PF01245 Ribosomal protein L19 JHT19_13895 PF01746 tRNA (Guanine-1)-methyltransferase JHT19_13900 PF01782 RimM N-terminal domain JHT19_13900 PF05239 PRC-barrel domain JHT19_13905 PF00886 Ribosomal protein S16 JHT19_13910 PF00448 SRP54-type protein, GTPase domain JHT19_13910 PF02881 SRP54-type protein, helical bundle domain JHT19_13910 PF02978 Signal peptide binding domain JHT19_13915 PF01578 Cytochrome C assembly protein JHT19_13920 PF00571 CBS domain JHT19_13920 PF03471 Transporter associated domain JHT19_13920 PF01595 Cyclin M transmembrane N-terminal domain JHT19_13925 PF02664 S-Ribosylhomocysteinase (LuxS) JHT19_13935 PF04262 Glutamate-cysteine ligase JHT19_13940 PF00675 Insulinase (Peptidase family M16) JHT19_13940 PF05193 Peptidase M16 inactive domain JHT19_13945 PF09335 SNARE associated Golgi protein JHT19_13950 PF08240 Alcohol dehydrogenase GroES-like domain JHT19_13950 PF00107 Zinc-binding dehydrogenase JHT19_13955 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit JHT19_13960 PF02436 Conserved carboxylase domain JHT19_13960 PF00364 Biotin-requiring enzyme JHT19_13960 PF00682 HMGL-like JHT19_13965 PF04277 Oxaloacetate decarboxylase, gamma chain JHT19_14020 PF02599 Global regulator protein family JHT19_14025 PF00696 Amino acid kinase family JHT19_14025 PF01842 ACT domain JHT19_14025 PF13840 ACT domain JHT19_14030 PF02272 DHHA1 domain JHT19_14030 PF01411 tRNA synthetases class II (A) JHT19_14030 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JHT19_14035 PF02631 RecX family JHT19_14040 PF00154 recA bacterial DNA recombination protein JHT19_14045 PF02464 Competence-damaged protein JHT19_14050 PF12161 HsdM N-terminal domain JHT19_14050 PF02384 N-6 DNA Methylase JHT19_14075 PF12008 Type I restriction and modification enzyme - subunit R C terminal JHT19_14075 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) JHT19_14075 PF18766 SWI2/SNF2 ATPase JHT19_14105 PF04717 Type VI secretion system, phage-baseplate injector JHT19_14145 PF04002 RadC-like JAB domain JHT19_14180 PF13358 DDE superfamily endonuclease JHT19_14185 PF00589 Phage integrase family JHT19_14185 PF14659 Phage integrase, N-terminal SAM-like domain JHT19_14190 PF05190 MutS family domain IV JHT19_14190 PF01624 MutS domain I JHT19_14190 PF05192 MutS domain III JHT19_14190 PF05188 MutS domain II JHT19_14190 PF00488 MutS domain V JHT19_14195 PF04545 Sigma-70, region 4 JHT19_14195 PF00140 Sigma-70 factor, region 1.2 JHT19_14195 PF04542 Sigma-70 region 2 JHT19_14195 PF04539 Sigma-70 region 3 JHT19_14200 PF01476 LysM domain JHT19_14200 PF01551 Peptidase family M23 JHT19_14210 PF01975 Survival protein SurE JHT19_14215 PF01142 tRNA pseudouridine synthase D (TruD) JHT19_14220 PF02542 YgbB family JHT19_14225 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JHT19_14230 PF04977 Septum formation initiator JHT19_14235 PF00113 Enolase, C-terminal TIM barrel domain JHT19_14235 PF03952 Enolase, N-terminal domain JHT19_14240 PF06418 CTP synthase N-terminus JHT19_14240 PF00117 Glutamine amidotransferase class-I JHT19_14245 PF03819 MazG nucleotide pyrophosphohydrolase domain JHT19_14250 PF02824 TGS domain JHT19_14250 PF04607 Region found in RelA / SpoT proteins JHT19_14250 PF13291 ACT domain JHT19_14255 PF01938 TRAM domain JHT19_14255 PF05958 tRNA (Uracil-5-)-methyltransferase JHT19_14260 PF00672 HAMP domain JHT19_14260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_14260 PF00512 His Kinase A (phospho-acceptor) domain JHT19_14260 PF01627 Hpt domain JHT19_14260 PF00072 Response regulator receiver domain JHT19_14260 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JHT19_14265 PF01648 4'-phosphopantetheinyl transferase superfamily JHT19_14270 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ JHT19_14275 PF02565 Recombination protein O C terminal JHT19_14275 PF11967 Recombination protein O N terminal JHT19_14280 PF07650 KH domain JHT19_14280 PF01926 50S ribosome-binding GTPase JHT19_14285 PF14622 Ribonuclease-III-like JHT19_14285 PF00035 Double-stranded RNA binding motif JHT19_14290 PF10502 Signal peptidase, peptidase S26 JHT19_14295 PF00009 Elongation factor Tu GTP binding domain JHT19_14295 PF06421 GTP-binding protein LepA C-terminus JHT19_14295 PF00679 Elongation factor G C-terminus JHT19_14295 PF03144 Elongation factor Tu domain 2 JHT19_14305 PF03888 MucB/RseB N-terminal domain JHT19_14305 PF17188 MucB/RseB C-terminal domain JHT19_14310 PF03873 Anti sigma-E protein RseA, C-terminal domain JHT19_14310 PF03872 Anti sigma-E protein RseA, N-terminal domain JHT19_14315 PF04542 Sigma-70 region 2 JHT19_14315 PF08281 Sigma-70, region 4 JHT19_14320 PF02910 Fumarate reductase flavoprotein C-term JHT19_14320 PF00890 FAD binding domain JHT19_14325 PF03937 Flavinator of succinate dehydrogenase JHT19_14330 PF01571 Aminomethyltransferase folate-binding domain JHT19_14345 PF01494 FAD binding domain JHT19_14350 PF01494 FAD binding domain JHT19_14355 PF03695 Uncharacterised protein family (UPF0149) JHT19_14360 PF05164 Cell division protein ZapA JHT19_14370 PF01812 5-formyltetrahydrofolate cyclo-ligase family JHT19_14375 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) JHT19_14380 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JHT19_14380 PF01842 ACT domain JHT19_14380 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JHT19_14385 PF04402 Protein of unknown function (DUF541) JHT19_14390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_14390 PF03466 LysR substrate binding domain JHT19_14395 PF01810 LysE type translocator JHT19_14400 PF04073 Aminoacyl-tRNA editing domain JHT19_14405 PF05552 Conserved TM helix JHT19_14405 PF00924 Mechanosensitive ion channel JHT19_14410 PF01116 Fructose-bisphosphate aldolase class-II JHT19_14415 PF00162 Phosphoglycerate kinase JHT19_14420 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JHT19_14420 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JHT19_14425 PF07715 TonB-dependent Receptor Plug Domain JHT19_14425 PF00593 TonB dependent receptor JHT19_14430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_14430 PF03466 LysR substrate binding domain JHT19_14435 PF00456 Transketolase, thiamine diphosphate binding domain JHT19_14435 PF02780 Transketolase, C-terminal domain JHT19_14435 PF02779 Transketolase, pyrimidine binding domain JHT19_14440 PF02773 S-adenosylmethionine synthetase, C-terminal domain JHT19_14440 PF02772 S-adenosylmethionine synthetase, central domain JHT19_14440 PF00438 S-adenosylmethionine synthetase, N-terminal domain JHT19_14450 PF10263 SprT-like family JHT19_14450 PF17283 SprT-like zinc ribbon domain JHT19_14455 PF04231 Endonuclease I JHT19_14460 PF04452 RNA methyltransferase JHT19_14465 PF02951 Prokaryotic glutathione synthetase, N-terminal domain JHT19_14465 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain JHT19_14470 PF02622 Uncharacterized ACR, COG1678 JHT19_14475 PF03652 Holliday junction resolvase JHT19_14480 PF00437 Type II/IV secretion system protein JHT19_14485 PF00437 Type II/IV secretion system protein JHT19_14490 PF01168 Alanine racemase, N-terminal domain JHT19_14495 PF03807 NADP oxidoreductase coenzyme F420-dependent JHT19_14495 PF14748 Pyrroline-5-carboxylate reductase dimerisation JHT19_14500 PF02325 YGGT family JHT19_14505 PF02594 Uncharacterised ACR, YggU family COG1872 JHT19_14515 PF01725 Ham1 family JHT19_14520 PF06969 HemN C-terminal domain JHT19_14520 PF04055 Radical SAM superfamily JHT19_14525 PF04960 Glutaminase JHT19_14530 PF02086 D12 class N6 adenine-specific DNA methyltransferase JHT19_14535 PF02390 Putative methyltransferase JHT19_14540 PF00633 Helix-hairpin-helix motif JHT19_14540 PF00730 HhH-GPD superfamily base excision DNA repair protein JHT19_14540 PF14815 NUDIX domain JHT19_14545 PF04362 Bacterial Fe(2+) trafficking JHT19_14550 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain JHT19_14550 PF01464 Transglycosylase SLT domain JHT19_14590 PF00672 HAMP domain JHT19_14590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT19_14590 PF17200 Single Cache domain 2 JHT19_14620 PF00171 Aldehyde dehydrogenase family JHT19_14665 PF00072 Response regulator receiver domain JHT19_14670 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JHT19_14670 PF00356 Bacterial regulatory proteins, lacI family JHT19_14675 PF04794 YdjC-like protein JHT19_14680 PF02056 Family 4 glycosyl hydrolase JHT19_14680 PF11975 Family 4 glycosyl hydrolase C-terminal domain JHT19_14685 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JHT19_14690 PF02378 Phosphotransferase system, EIIC JHT19_14695 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JHT19_14700 PF01522 Polysaccharide deacetylase JHT19_14710 PF13533 Biotin-lipoyl like JHT19_14720 PF08360 QacR-like protein, C-terminal region JHT19_14720 PF00440 Bacterial regulatory proteins, tetR family JHT19_14750 PF02899 Phage integrase, N-terminal SAM-like domain JHT19_14750 PF00589 Phage integrase family JHT19_14760 PF00106 short chain dehydrogenase JHT19_14765 PF10011 Predicted membrane protein (DUF2254) JHT19_14780 PF03739 Lipopolysaccharide export system permease LptF/LptG JHT19_14785 PF00883 Cytosol aminopeptidase family, catalytic domain JHT19_14785 PF02789 Cytosol aminopeptidase family, N-terminal domain JHT19_14790 PF04364 DNA polymerase III chi subunit, HolC JHT19_14795 PF10458 Valyl tRNA synthetase tRNA binding arm JHT19_14795 PF00133 tRNA synthetases class I (I, L, M and V) JHT19_14795 PF08264 Anticodon-binding domain of tRNA JHT19_14805 PF00583 Acetyltransferase (GNAT) family JHT19_14815 PF06877 Regulator of ribonuclease activity B JHT19_14825 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JHT19_14825 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JHT19_14835 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JHT19_14835 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JHT19_14840 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain JHT19_14840 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain JHT19_14845 PF01042 Endoribonuclease L-PSP JHT19_14850 PF01553 Acyltransferase JHT19_14855 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JHT19_14860 PF01722 BolA-like protein JHT19_14870 PF05494 MlaC protein JHT19_14875 PF02470 MlaD protein JHT19_14885 PF00005 ABC transporter JHT19_14890 PF01699 Sodium/calcium exchanger protein JHT19_14895 PF01380 SIS domain JHT19_14895 PF00571 CBS domain JHT19_14905 PF03968 OstA-like protein JHT19_14910 PF12399 Branched-chain amino acid ATP-binding cassette transporter JHT19_14910 PF00005 ABC transporter JHT19_14915 PF00309 Sigma-54 factor, Activator interacting domain (AID) JHT19_14915 PF04552 Sigma-54, DNA binding domain JHT19_14915 PF04963 Sigma-54 factor, core binding domain JHT19_14920 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JHT19_14925 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JHT19_14930 PF03668 P-loop ATPase protein family JHT19_14935 PF00381 PTS HPr component phosphorylation site JHT19_14940 PF01769 Divalent cation transporter JHT19_14940 PF00571 CBS domain JHT19_14940 PF03448 MgtE intracellular N domain JHT19_14945 PF01523 Putative modulator of DNA gyrase JHT19_14950 PF04751 Protein of unknown function (DUF615) JHT19_14955 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JHT19_14955 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JHT19_14960 PF00849 RNA pseudouridylate synthase JHT19_14970 PF18339 RapA N-terminal Tudor like domain 1 JHT19_14970 PF18337 RapA N-terminal Tudor like domain JHT19_14970 PF12137 RNA polymerase recycling family C-terminal JHT19_14970 PF00176 SNF2 family N-terminal domain JHT19_14970 PF00271 Helicase conserved C-terminal domain JHT19_14975 PF02562 PhoH-like protein JHT19_14975 PF13638 PIN domain JHT19_14980 PF01523 Putative modulator of DNA gyrase JHT19_14985 PF00795 Carbon-nitrogen hydrolase JHT19_14990 PF13502 AsmA-like C-terminal region JHT19_14990 PF13116 Protein of unknown function JHT19_14995 PF00575 S1 RNA binding domain JHT19_14995 PF10150 Ribonuclease E/G family JHT19_15000 PF02545 Maf-like protein JHT19_15005 PF04093 rod shape-determining protein MreD JHT19_15010 PF04085 rod shape-determining protein MreC JHT19_15050 PF00114 Pilin (bacterial filament) JHT19_15050 PF07963 Prokaryotic N-terminal methylation motif JHT19_15060 PF00482 Type II secretion system (T2SS), protein F JHT19_15065 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JHT19_15065 PF00437 Type II/IV secretion system protein JHT19_15075 PF13401 AAA domain JHT19_15075 PF01471 Putative peptidoglycan binding domain JHT19_15080 PF00263 Bacterial type II and III secretion system protein JHT19_15080 PF03958 Bacterial type II/III secretion system short domain JHT19_15080 PF11741 AMIN domain JHT19_15080 PF07660 Secretin and TonB N terminus short domain JHT19_15100 PF00990 Diguanylate cyclase, GGDEF domain JHT19_15100 PF00563 EAL domain JHT19_15100 PF17157 Gammaproteobacterial periplasmic sensor domain JHT19_15105 PF00436 Single-strand binding protein family JHT19_15110 PF00196 Bacterial regulatory proteins, luxR family JHT19_15115 PF00483 Nucleotidyl transferase JHT19_15120 PF17755 UvrA DNA-binding domain JHT19_15120 PF17760 UvrA interaction domain JHT19_15120 PF00005 ABC transporter JHT19_15130 PF00266 Aminotransferase class-V JHT19_15140 PF02310 B12 binding domain JHT19_15140 PF02607 B12 binding domain JHT19_15140 PF02965 Vitamin B12 dependent methionine synthase, activation domain JHT19_15140 PF00809 Pterin binding enzyme JHT19_15140 PF02574 Homocysteine S-methyltransferase JHT19_15145 PF00999 Sodium/hydrogen exchanger family JHT19_15225 PF01507 Phosphoadenosine phosphosulfate reductase family JHT19_15230 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JHT19_15230 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JHT19_15235 PF00258 Flavodoxin JHT19_15235 PF00175 Oxidoreductase NAD-binding domain JHT19_15235 PF00667 FAD binding domain JHT19_15255 PF01207 Dihydrouridine synthase (Dus) JHT19_15260 PF01475 Ferric uptake regulator family JHT19_15270 PF00342 Phosphoglucose isomerase JHT19_15275 PF01894 Uncharacterised protein family UPF0047 JHT19_15285 PF00842 Alanine racemase, C-terminal domain JHT19_15285 PF01168 Alanine racemase, N-terminal domain JHT19_15290 PF00772 DnaB-like helicase N terminal domain JHT19_15290 PF03796 DnaB-like helicase C terminal domain JHT19_15300 PF03948 Ribosomal protein L9, C-terminal domain JHT19_15300 PF01281 Ribosomal protein L9, N-terminal domain JHT19_15305 PF01084 Ribosomal protein S18 JHT19_15310 PF00436 Single-strand binding protein family JHT19_15315 PF01250 Ribosomal protein S6 JHT19_15320 PF00834 Ribulose-phosphate 3 epimerase family JHT19_15325 PF02086 D12 class N6 adenine-specific DNA methyltransferase JHT19_15335 PF01761 3-dehydroquinate synthase JHT19_15340 PF01202 Shikimate kinase JHT19_15345 PF00263 Bacterial type II and III secretion system protein JHT19_15345 PF03958 Bacterial type II/III secretion system short domain JHT19_15345 PF07660 Secretin and TonB N terminus short domain JHT19_15345 PF11741 AMIN domain JHT19_15350 PF04351 Pilus assembly protein, PilP JHT19_15360 PF05137 Fimbrial assembly protein (PilN) JHT19_15375 PF03466 LysR substrate binding domain JHT19_15375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_15380 PF08534 Redoxin JHT19_15380 PF00462 Glutaredoxin JHT19_15390 PF00206 Lyase JHT19_15390 PF00583 Acetyltransferase (GNAT) family JHT19_15390 PF14698 Argininosuccinate lyase C-terminal JHT19_15395 PF00764 Arginosuccinate synthase JHT19_15400 PF00696 Amino acid kinase family JHT19_15405 PF02774 Semialdehyde dehydrogenase, dimerisation domain JHT19_15405 PF01118 Semialdehyde dehydrogenase, NAD binding domain JHT19_15410 PF07687 Peptidase dimerisation domain JHT19_15410 PF01546 Peptidase family M20/M25/M40 JHT19_15415 PF00311 Phosphoenolpyruvate carboxylase JHT19_15425 PF02219 Methylenetetrahydrofolate reductase JHT19_15430 PF00742 Homoserine dehydrogenase JHT19_15430 PF03447 Homoserine dehydrogenase, NAD binding domain JHT19_15430 PF00696 Amino acid kinase family JHT19_15435 PF01053 Cys/Met metabolism PLP-dependent enzyme JHT19_15440 PF01340 Met Apo-repressor, MetJ JHT19_15445 PF00390 Malic enzyme, N-terminal domain JHT19_15445 PF03949 Malic enzyme, NAD binding domain JHT19_15455 PF04324 BFD-like [2Fe-2S] binding domain JHT19_15460 PF00009 Elongation factor Tu GTP binding domain JHT19_15460 PF03144 Elongation factor Tu domain 2 JHT19_15460 PF03143 Elongation factor Tu C-terminal domain JHT19_15465 PF00679 Elongation factor G C-terminus JHT19_15465 PF00009 Elongation factor Tu GTP binding domain JHT19_15465 PF03144 Elongation factor Tu domain 2 JHT19_15465 PF03764 Elongation factor G, domain IV JHT19_15465 PF14492 Elongation Factor G, domain II JHT19_15470 PF00177 Ribosomal protein S7p/S5e JHT19_15475 PF00164 Ribosomal protein S12/S23 JHT19_15480 PF04077 DsrH like protein JHT19_15485 PF02635 DsrE/DsrF-like family JHT19_15490 PF02635 DsrE/DsrF-like family JHT19_15495 PF08348 YheO-like PAS domain JHT19_15495 PF13309 HTH domain JHT19_15500 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JHT19_15500 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JHT19_15510 PF04102 SlyX JHT19_15515 PF01112 Asparaginase JHT19_15520 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JHT19_15530 PF02254 TrkA-N domain JHT19_15530 PF00999 Sodium/hydrogen exchanger family JHT19_15535 PF02525 Flavodoxin-like fold JHT19_15540 PF00005 ABC transporter JHT19_15540 PF12848 ABC transporter JHT19_15550 PF00561 alpha/beta hydrolase fold JHT19_15555 PF06794 Uncharacterised protein family (UPF0270) JHT19_15560 PF00485 Phosphoribulokinase / Uridine kinase family JHT19_15565 PF00027 Cyclic nucleotide-binding domain JHT19_15565 PF13545 Crp-like helix-turn-helix domain JHT19_15575 PF00171 Aldehyde dehydrogenase family JHT19_15580 PF04958 Arginine N-succinyltransferase beta subunit JHT19_15585 PF00202 Aminotransferase class-III JHT19_15590 PF00117 Glutamine amidotransferase class-I JHT19_15605 PF00579 tRNA synthetases class I (W and Y) JHT19_15610 PF13419 Haloacid dehalogenase-like hydrolase JHT19_15615 PF00588 SpoU rRNA Methylase family JHT19_15615 PF08032 RNA 2'-O ribose methyltransferase substrate binding JHT19_15620 PF00575 S1 RNA binding domain JHT19_15620 PF00773 RNB domain JHT19_15620 PF08206 Ribonuclease B OB domain JHT19_15620 PF08461 Ribonuclease R winged-helix domain JHT19_15620 PF17876 Cold shock domain JHT19_15625 PF02082 Transcriptional regulator JHT19_15630 PF00042 Globin JHT19_15630 PF00175 Oxidoreductase NAD-binding domain JHT19_15630 PF00970 Oxidoreductase FAD-binding domain JHT19_15635 PF08238 Sel1 repeat JHT19_15640 PF00709 Adenylosuccinate synthetase JHT19_15645 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) JHT19_15650 PF01145 SPFH domain / Band 7 family JHT19_15660 PF16360 GTP-binding GTPase Middle Region JHT19_15660 PF01926 50S ribosome-binding GTPase JHT19_15660 PF13167 GTP-binding GTPase N-terminal JHT19_15665 PF17209 Hfq protein JHT19_15680 PF01520 N-acetylmuramoyl-L-alanine amidase JHT19_15685 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JHT19_15690 PF08331 Domain of unknown function (DUF1730) JHT19_15760 PF00929 Exonuclease JHT19_15765 PF03193 RsgA GTPase JHT19_15770 PF02666 Phosphatidylserine decarboxylase JHT19_15775 PF00939 Sodium:sulfate symporter transmembrane region JHT19_15780 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT19_15780 PF00672 HAMP domain JHT19_15790 PF06415 BPG-independent PGAM N-terminus (iPGM_N) JHT19_15790 PF01676 Metalloenzyme superfamily JHT19_15795 PF00581 Rhodanese-like domain JHT19_15800 PF02556 Preprotein translocase subunit SecB JHT19_15805 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JHT19_15805 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JHT19_15810 PF00132 Bacterial transferase hexapeptide (six repeats) JHT19_15810 PF06426 Serine acetyltransferase, N-terminal JHT19_15815 PF01551 Peptidase family M23 JHT19_15825 PF00440 Bacterial regulatory proteins, tetR family JHT19_15825 PF08360 QacR-like protein, C-terminal region JHT19_15835 PF00152 tRNA synthetases class II (D, K and N) JHT19_15840 PF00890 FAD binding domain JHT19_15840 PF02910 Fumarate reductase flavoprotein C-term JHT19_15845 PF13183 4Fe-4S dicluster domain JHT19_15845 PF13085 2Fe-2S iron-sulfur cluster binding domain JHT19_15850 PF02300 Fumarate reductase subunit C JHT19_15855 PF02313 Fumarate reductase subunit D JHT19_15865 PF08207 Elongation factor P (EF-P) KOW-like domain JHT19_15865 PF09285 Elongation factor P, C-terminal JHT19_15865 PF01132 Elongation factor P (EF-P) OB domain JHT19_15870 PF04055 Radical SAM superfamily JHT19_15880 PF00842 Alanine racemase, C-terminal domain JHT19_15880 PF01168 Alanine racemase, N-terminal domain JHT19_15885 PF02308 MgtC family JHT19_15895 PF00118 TCP-1/cpn60 chaperonin family JHT19_15900 PF00166 Chaperonin 10 Kd subunit JHT19_15905 PF01554 MatE JHT19_15910 PF00365 Phosphofructokinase JHT19_15915 PF01545 Cation efflux family JHT19_15915 PF16916 Dimerisation domain of Zinc Transporter JHT19_15920 PF07813 LTXXQ motif family protein JHT19_15925 PF00486 Transcriptional regulatory protein, C terminal JHT19_15925 PF00072 Response regulator receiver domain JHT19_15930 PF00512 His Kinase A (phospho-acceptor) domain JHT19_15930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_15930 PF00672 HAMP domain JHT19_15930 PF16527 Two-component sensor protein CpxA, periplasmic domain JHT19_15935 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JHT19_15935 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JHT19_15940 PF00588 SpoU rRNA Methylase family JHT19_15945 PF04186 FxsA cytoplasmic membrane protein JHT19_15950 PF00206 Lyase JHT19_15950 PF10415 Fumarase C C-terminus JHT19_15955 PF03605 Anaerobic c4-dicarboxylate membrane transporter JHT19_15960 PF02683 Cytochrome C biogenesis protein transmembrane region JHT19_15960 PF11412 Disulphide bond corrector protein DsbC JHT19_15965 PF00196 Bacterial regulatory proteins, luxR family JHT19_15965 PF00072 Response regulator receiver domain JHT19_15970 PF03471 Transporter associated domain JHT19_15970 PF00999 Sodium/hydrogen exchanger family JHT19_15970 PF02080 TrkA-C domain JHT19_15980 PF00474 Sodium:solute symporter family JHT19_15995 PF00206 Lyase JHT19_15995 PF10415 Fumarase C C-terminus JHT19_16000 PF00672 HAMP domain JHT19_16000 PF00072 Response regulator receiver domain JHT19_16000 PF01627 Hpt domain JHT19_16000 PF00512 His Kinase A (phospho-acceptor) domain JHT19_16000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_16005 PF12832 MFS_1 like family JHT19_16020 PF13193 AMP-binding enzyme C-terminal domain JHT19_16020 PF00501 AMP-binding enzyme JHT19_16020 PF16177 Acetyl-coenzyme A synthetase N-terminus JHT19_16025 PF01220 Dehydroquinase class II JHT19_16030 PF00364 Biotin-requiring enzyme JHT19_16035 PF02785 Biotin carboxylase C-terminal domain JHT19_16035 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JHT19_16035 PF00289 Biotin carboxylase, N-terminal domain JHT19_16045 PF01207 Dihydrouridine synthase (Dus) JHT19_16050 PF02954 Bacterial regulatory protein, Fis family JHT19_16055 PF07690 Major Facilitator Superfamily JHT19_16060 PF12848 ABC transporter JHT19_16060 PF00005 ABC transporter JHT19_16065 PF00990 Diguanylate cyclase, GGDEF domain JHT19_16065 PF05230 MASE2 domain JHT19_16140 PF01177 Asp/Glu/Hydantoin racemase JHT19_16150 PF07715 TonB-dependent Receptor Plug Domain JHT19_16150 PF00593 TonB dependent receptor JHT19_16155 PF05958 tRNA (Uracil-5-)-methyltransferase JHT19_16165 PF00440 Bacterial regulatory proteins, tetR family JHT19_16170 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHT19_16170 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JHT19_16175 PF01554 MatE JHT19_16180 PF04072 Leucine carboxyl methyltransferase JHT19_16185 PF01726 LexA DNA binding domain JHT19_16185 PF00717 Peptidase S24-like JHT19_16190 PF01553 Acyltransferase JHT19_16195 PF01040 UbiA prenyltransferase family JHT19_16200 PF04345 Chorismate lyase JHT19_16205 PF03748 Flagellar basal body-associated protein FliL JHT19_16210 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease JHT19_16210 PF01694 Rhomboid family JHT19_16215 PF00581 Rhodanese-like domain JHT19_16220 PF04545 Sigma-70, region 4 JHT19_16220 PF04542 Sigma-70 region 2 JHT19_16220 PF00140 Sigma-70 factor, region 1.2 JHT19_16225 PF18075 FtsX extracellular domain JHT19_16230 PF00005 ABC transporter JHT19_16235 PF00448 SRP54-type protein, GTPase domain JHT19_16235 PF02881 SRP54-type protein, helical bundle domain JHT19_16250 PF01914 MarC family integral membrane protein JHT19_16295 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JHT19_16295 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JHT19_16300 PF01022 Bacterial regulatory protein, arsR family JHT19_16305 PF08668 HDOD domain JHT19_16305 PF00563 EAL domain JHT19_16310 PF01810 LysE type translocator JHT19_16315 PF12146 Serine aminopeptidase, S33 JHT19_16335 PF03942 DTW domain JHT19_16345 PF13419 Haloacid dehalogenase-like hydrolase JHT19_16350 PF02899 Phage integrase, N-terminal SAM-like domain JHT19_16350 PF00589 Phage integrase family JHT19_16360 PF01678 Diaminopimelate epimerase JHT19_16365 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JHT19_16365 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JHT19_16375 PF01491 Frataxin-like domain JHT19_16380 PF01295 Adenylate cyclase, class-I JHT19_16380 PF12633 Adenylate cyclase NT domain JHT19_16385 PF03900 Porphobilinogen deaminase, C-terminal domain JHT19_16385 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JHT19_16390 PF02602 Uroporphyrinogen-III synthase HemD JHT19_16395 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase JHT19_16400 PF07219 HemY protein N-terminus JHT19_16405 PF13358 DDE superfamily endonuclease JHT19_16440 PF00175 Oxidoreductase NAD-binding domain JHT19_16445 PF00111 2Fe-2S iron-sulfur cluster binding domain JHT19_16450 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase JHT19_16460 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JHT19_16460 PF07498 Rho termination factor, N-terminal domain JHT19_16460 PF07497 Rho termination factor, RNA-binding domain JHT19_16465 PF00085 Thioredoxin JHT19_16470 PF00271 Helicase conserved C-terminal domain JHT19_16470 PF00270 DEAD/DEAH box helicase JHT19_16475 PF02541 Ppx/GppA phosphatase family JHT19_16480 PF02592 Putative vitamin uptake transporter JHT19_16490 PF00270 DEAD/DEAH box helicase JHT19_16490 PF00271 Helicase conserved C-terminal domain JHT19_16490 PF00570 HRDC domain JHT19_16490 PF16124 RecQ zinc-binding JHT19_16490 PF09382 RQC domain JHT19_16495 PF00892 EamA-like transporter family JHT19_16505 PF01810 LysE type translocator JHT19_16515 PF13361 UvrD-like helicase C-terminal domain JHT19_16515 PF00580 UvrD/REP helicase N-terminal domain JHT19_16525 PF05114 Protein of unknown function (DUF692) JHT19_16545 PF07690 Major Facilitator Superfamily JHT19_16550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_16550 PF03466 LysR substrate binding domain JHT19_16555 PF00557 Metallopeptidase family M24 JHT19_16555 PF01321 Creatinase/Prolidase N-terminal domain JHT19_16555 PF01321 Creatinase/Prolidase N-terminal domain JHT19_16555 PF00557 Metallopeptidase family M24 JHT19_16560 PF06968 Biotin and Thiamin Synthesis associated domain JHT19_16560 PF04055 Radical SAM superfamily JHT19_16565 PF05690 Thiazole biosynthesis protein ThiG JHT19_16570 PF02597 ThiS family JHT19_16575 PF00899 ThiF family JHT19_16580 PF02581 Thiamine monophosphate synthase JHT19_16585 PF13667 ThiC-associated domain JHT19_16585 PF01964 Radical SAM ThiC family JHT19_16590 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JHT19_16605 PF13358 DDE superfamily endonuclease JHT19_16645 PF00132 Bacterial transferase hexapeptide (six repeats) JHT19_16650 PF07369 Protein of unknown function (DUF1488) JHT19_16655 PF01488 Shikimate / quinate 5-dehydrogenase JHT19_16655 PF08501 Shikimate dehydrogenase substrate binding domain JHT19_16655 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JHT19_16660 PF01218 Coproporphyrinogen III oxidase JHT19_16665 PF01300 Telomere recombination JHT19_16670 PF00731 AIR carboxylase JHT19_16675 PF02222 ATP-grasp domain JHT19_16675 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JHT19_16680 PF01396 Topoisomerase DNA binding C4 zinc finger JHT19_16685 PF04361 Protein of unknown function (DUF494) JHT19_16690 PF17782 DprA winged helix domain JHT19_16690 PF02481 DNA recombination-mediator protein A JHT19_16700 PF01327 Polypeptide deformylase JHT19_16705 PF02911 Formyl transferase, C-terminal domain JHT19_16705 PF00551 Formyl transferase JHT19_16710 PF01029 NusB family JHT19_16710 PF01189 16S rRNA methyltransferase RsmB/F JHT19_16715 PF02080 TrkA-C domain JHT19_16715 PF02254 TrkA-N domain JHT19_16720 PF02386 Cation transport protein JHT19_16730 PF03006 Haemolysin-III related JHT19_16735 PF07070 SpoOM protein JHT19_16745 PF06288 Protein of unknown function (DUF1040) JHT19_16750 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase JHT19_16750 PF13746 4Fe-4S dicluster domain JHT19_16750 PF12801 4Fe-4S binding domain JHT19_16755 PF01636 Phosphotransferase enzyme family JHT19_16760 PF01323 DSBA-like thioredoxin domain JHT19_16765 PF01553 Acyltransferase JHT19_16845 PF13408 Recombinase zinc beta ribbon domain JHT19_16845 PF07508 Recombinase JHT19_16845 PF00239 Resolvase, N terminal domain JHT19_16850 PF01078 Magnesium chelatase, subunit ChlI JHT19_16850 PF13335 Magnesium chelatase, subunit ChlI C-terminal JHT19_16855 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JHT19_16855 PF00205 Thiamine pyrophosphate enzyme, central domain JHT19_16855 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JHT19_16865 PF01063 Amino-transferase class IV JHT19_16870 PF00920 Dehydratase family JHT19_16875 PF00585 C-terminal regulatory domain of Threonine dehydratase JHT19_16875 PF00291 Pyridoxal-phosphate dependent enzyme JHT19_16880 PF03466 LysR substrate binding domain JHT19_16880 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_16885 PF07690 Major Facilitator Superfamily JHT19_16890 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHT19_16895 PF00528 Binding-protein-dependent transport system inner membrane component JHT19_16900 PF00132 Bacterial transferase hexapeptide (six repeats) JHT19_16900 PF12804 MobA-like NTP transferase domain JHT19_16905 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain JHT19_16905 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JHT19_16910 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JHT19_16910 PF02874 ATP synthase alpha/beta family, beta-barrel domain JHT19_16915 PF00231 ATP synthase JHT19_16920 PF02874 ATP synthase alpha/beta family, beta-barrel domain JHT19_16920 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JHT19_16920 PF00306 ATP synthase alpha/beta chain, C terminal domain JHT19_16925 PF00213 ATP synthase delta (OSCP) subunit JHT19_16930 PF00430 ATP synthase B/B' CF(0) JHT19_16935 PF00137 ATP synthase subunit C JHT19_16940 PF00119 ATP synthase A chain JHT19_16945 PF03899 ATP synthase I chain JHT19_16950 PF02195 ParB-like nuclease domain JHT19_16950 PF17762 HTH domain found in ParB protein JHT19_16955 PF13614 AAA domain JHT19_16960 PF02527 rRNA small subunit methyltransferase G JHT19_16965 PF13932 GidA associated domain JHT19_16965 PF01134 Glucose inhibited division protein A JHT19_16970 PF00258 Flavodoxin JHT19_16975 PF01926 50S ribosome-binding GTPase JHT19_16975 PF12631 MnmE helical domain JHT19_16975 PF10396 GTP-binding protein TrmE N-terminus JHT19_16980 PF02096 60Kd inner membrane protein JHT19_16980 PF14849 YidC periplasmic domain JHT19_16990 PF00825 Ribonuclease P JHT19_16995 PF00468 Ribosomal protein L34 JHT19_17000 PF00005 ABC transporter JHT19_17005 PF00528 Binding-protein-dependent transport system inner membrane component JHT19_17010 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHT19_17030 PF03358 NADPH-dependent FMN reductase JHT19_17035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JHT19_17040 PF00246 Zinc carboxypeptidase JHT19_17045 PF01418 Helix-turn-helix domain, rpiR family JHT19_17045 PF01380 SIS domain JHT19_17050 PF01380 SIS domain JHT19_17055 PF02378 Phosphotransferase system, EIIC JHT19_17055 PF00367 phosphotransferase system, EIIB JHT19_17060 PF00267 Gram-negative porin JHT19_17065 PF03575 Peptidase family S51 JHT19_17075 PF00132 Bacterial transferase hexapeptide (six repeats) JHT19_17085 PF13718 GNAT acetyltransferase 2 JHT19_17085 PF05127 Helicase JHT19_17090 PF08775 ParB family JHT19_17090 PF02195 ParB-like nuclease domain JHT19_17095 PF13614 AAA domain JHT19_17095 PF18607 ParA helix turn helix domain JHT19_17110 PF00005 ABC transporter JHT19_17110 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JHT19_17125 PF08719 Domain of unknown function (DUF1768) JHT19_17125 PF00925 GTP cyclohydrolase II JHT19_17135 PF01627 Hpt domain JHT19_17135 PF00072 Response regulator receiver domain JHT19_17135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_17135 PF00672 HAMP domain JHT19_17135 PF00512 His Kinase A (phospho-acceptor) domain JHT19_17135 PF17149 Periplasmic sensor domain found in signal transduction proteins JHT19_17145 PF01709 Transcriptional regulator JHT19_17150 PF01098 Cell cycle protein JHT19_17160 PF00005 ABC transporter JHT19_17180 PF07694 5TMR of 5TMR-LYT JHT19_17180 PF13492 GAF domain JHT19_17180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_17180 PF06580 Histidine kinase JHT19_17185 PF00072 Response regulator receiver domain JHT19_17185 PF04397 LytTr DNA-binding domain JHT19_17195 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JHT19_17200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT19_17200 PF00672 HAMP domain JHT19_17200 PF17200 Single Cache domain 2 JHT19_17215 PF00132 Bacterial transferase hexapeptide (six repeats) JHT19_17220 PF03616 Sodium/glutamate symporter JHT19_17230 PF00005 ABC transporter JHT19_17235 PF00392 Bacterial regulatory proteins, gntR family JHT19_17235 PF00155 Aminotransferase class I and II JHT19_17240 PF03616 Sodium/glutamate symporter JHT19_17250 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JHT19_17265 PF03466 LysR substrate binding domain JHT19_17265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_17270 PF17954 Quercetinase C-terminal cupin domain JHT19_17270 PF02678 Pirin JHT19_17275 PF07681 DoxX JHT19_17285 PF06029 AlkA N-terminal domain JHT19_17285 PF00730 HhH-GPD superfamily base excision DNA repair protein JHT19_17290 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JHT19_17290 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JHT19_17300 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JHT19_17310 PF03600 Citrate transporter JHT19_17330 PF08329 Chitinase A, N-terminal domain JHT19_17330 PF00704 Glycosyl hydrolases family 18 JHT19_17340 PF06865 Pyrimidine/purine nucleoside phosphorylase JHT19_17350 PF00563 EAL domain JHT19_17350 PF00990 Diguanylate cyclase, GGDEF domain JHT19_17375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_17375 PF03466 LysR substrate binding domain JHT19_17390 PF00990 Diguanylate cyclase, GGDEF domain JHT19_17390 PF17152 Periplasmic sensor domain JHT19_17400 PF00756 Putative esterase JHT19_17405 PF00107 Zinc-binding dehydrogenase JHT19_17405 PF08240 Alcohol dehydrogenase GroES-like domain JHT19_17410 PF00797 N-acetyltransferase JHT19_17415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_17415 PF03466 LysR substrate binding domain JHT19_17430 PF09339 IclR helix-turn-helix domain JHT19_17430 PF01614 Bacterial transcriptional regulator JHT19_17440 PF10688 Bacterial inner membrane protein JHT19_17445 PF07883 Cupin domain JHT19_17460 PF00294 pfkB family carbohydrate kinase JHT19_17465 PF01081 KDPG and KHG aldolase JHT19_17480 PF13229 Right handed beta helix region JHT19_17485 PF00474 Sodium:solute symporter family JHT19_17490 PF14583 Oligogalacturonate lyase JHT19_17495 PF04954 Siderophore-interacting protein JHT19_17495 PF08021 Siderophore-interacting FAD-binding domain JHT19_17500 PF01810 LysE type translocator JHT19_17505 PF01037 Lrp/AsnC ligand binding domain JHT19_17510 PF18416 N-acetylglucosamine binding protein domain 2 JHT19_17510 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading JHT19_17525 PF13599 Pentapeptide repeats (9 copies) JHT19_17530 PF03922 OmpW family JHT19_17535 PF13533 Biotin-lipoyl like JHT19_17540 PF07690 Major Facilitator Superfamily JHT19_17560 PF01204 Trehalase JHT19_17565 PF01661 Macro domain JHT19_17570 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JHT19_17575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_17575 PF03466 LysR substrate binding domain JHT19_17585 PF03466 LysR substrate binding domain JHT19_17585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_17600 PF13419 Haloacid dehalogenase-like hydrolase JHT19_17625 PF13556 PucR C-terminal helix-turn-helix domain JHT19_17625 PF17853 GGDEF-like domain JHT19_17625 PF05651 Putative sugar diacid recognition JHT19_17630 PF02447 GntP family permease JHT19_17635 PF02595 Glycerate kinase family JHT19_17640 PF00392 Bacterial regulatory proteins, gntR family JHT19_17640 PF00155 Aminotransferase class I and II JHT19_17660 PF00583 Acetyltransferase (GNAT) family JHT19_17690 PF01568 Molydopterin dinucleotide binding domain JHT19_17690 PF18364 Molybdopterin oxidoreductase N-terminal domain JHT19_17690 PF00384 Molybdopterin oxidoreductase JHT19_17700 PF02581 Thiamine monophosphate synthase JHT19_17705 PF02110 Hydroxyethylthiazole kinase family JHT19_17710 PF03070 TENA/THI-4/PQQC family JHT19_17715 PF09084 NMT1/THI5 like JHT19_17720 PF00528 Binding-protein-dependent transport system inner membrane component JHT19_17725 PF00005 ABC transporter JHT19_17730 PF08543 Phosphomethylpyrimidine kinase JHT19_17735 PF01523 Putative modulator of DNA gyrase JHT19_17740 PF01523 Putative modulator of DNA gyrase JHT19_17745 PF04013 Putative SAM-dependent RNA methyltransferase JHT19_17795 PF10928 Protein of unknown function (DUF2810) JHT19_17800 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JHT19_17800 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JHT19_17810 PF03009 Glycerophosphoryl diester phosphodiesterase family JHT19_17815 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JHT19_17815 PF00056 lactate/malate dehydrogenase, NAD binding domain JHT19_17820 PF00072 Response regulator receiver domain JHT19_17820 PF00486 Transcriptional regulatory protein, C terminal JHT19_17825 PF00672 HAMP domain JHT19_17825 PF16750 Sensor domain of 2-component histidine kinase JHT19_17825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_17825 PF00512 His Kinase A (phospho-acceptor) domain JHT19_17830 PF07715 TonB-dependent Receptor Plug Domain JHT19_17830 PF00593 TonB dependent receptor JHT19_17845 PF01618 MotA/TolQ/ExbB proton channel family JHT19_17850 PF02472 Biopolymer transport protein ExbD/TolR JHT19_17890 PF01297 Zinc-uptake complex component A periplasmic JHT19_17895 PF00005 ABC transporter JHT19_17900 PF00950 ABC 3 transport family JHT19_17915 PF00326 Prolyl oligopeptidase family JHT19_17915 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain JHT19_17920 PF07690 Major Facilitator Superfamily JHT19_17925 PF00491 Arginase family JHT19_17930 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JHT19_17930 PF17944 Arginine decarboxylase C-terminal helical extension JHT19_17930 PF17810 Arginine decarboxylase helical bundle domain JHT19_17935 PF00753 Metallo-beta-lactamase superfamily JHT19_17940 PF08443 RimK-like ATP-grasp domain JHT19_17940 PF18030 RimK PreATP-grasp domain JHT19_17945 PF08443 RimK-like ATP-grasp domain JHT19_17945 PF18030 RimK PreATP-grasp domain JHT19_17950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_17950 PF03466 LysR substrate binding domain JHT19_17975 PF00232 Glycosyl hydrolase family 1 JHT19_17990 PF02954 Bacterial regulatory protein, Fis family JHT19_17990 PF00072 Response regulator receiver domain JHT19_17990 PF00158 Sigma-54 interaction domain JHT19_17995 PF00990 Diguanylate cyclase, GGDEF domain JHT19_17995 PF08448 PAS fold JHT19_18000 PF05525 Branched-chain amino acid transport protein JHT19_18015 PF01266 FAD dependent oxidoreductase JHT19_18025 PF01212 Beta-eliminating lyase JHT19_18040 PF01773 Na+ dependent nucleoside transporter N-terminus JHT19_18040 PF07662 Na+ dependent nucleoside transporter C-terminus JHT19_18040 PF07670 Nucleoside recognition JHT19_18050 PF13532 2OG-Fe(II) oxygenase superfamily JHT19_18060 PF12729 Four helix bundle sensory module for signal transduction JHT19_18060 PF00672 HAMP domain JHT19_18060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT19_18075 PF00990 Diguanylate cyclase, GGDEF domain JHT19_18080 PF03441 FAD binding domain of DNA photolyase JHT19_18080 PF00875 DNA photolyase JHT19_18085 PF04244 Deoxyribodipyrimidine photo-lyase-related protein JHT19_18090 PF00919 Uncharacterized protein family UPF0004 JHT19_18090 PF04055 Radical SAM superfamily JHT19_18100 PF01625 Peptide methionine sulfoxide reductase JHT19_18100 PF01641 SelR domain JHT19_18105 PF02566 OsmC-like protein JHT19_18110 PF14602 Hexapeptide repeat of succinyl-transferase JHT19_18110 PF12464 Maltose acetyltransferase JHT19_18145 PF03466 LysR substrate binding domain JHT19_18145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_18150 PF13419 Haloacid dehalogenase-like hydrolase JHT19_18165 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) JHT19_18170 PF00194 Eukaryotic-type carbonic anhydrase JHT19_18175 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) JHT19_18180 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JHT19_18185 PF02687 FtsX-like permease family JHT19_18185 PF12704 MacB-like periplasmic core domain JHT19_18185 PF00005 ABC transporter JHT19_18190 PF02321 Outer membrane efflux protein JHT19_18195 PF00657 GDSL-like Lipase/Acylhydrolase JHT19_18200 PF05922 Peptidase inhibitor I9 JHT19_18200 PF00082 Subtilase family JHT19_18210 PF03611 PTS system sugar-specific permease component JHT19_18220 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JHT19_18225 PF00356 Bacterial regulatory proteins, lacI family JHT19_18230 PF13419 Haloacid dehalogenase-like hydrolase JHT19_18235 PF00202 Aminotransferase class-III JHT19_18240 PF00266 Aminotransferase class-V JHT19_18255 PF00005 ABC transporter JHT19_18260 PF00528 Binding-protein-dependent transport system inner membrane component JHT19_18265 PF07702 UTRA domain JHT19_18265 PF00392 Bacterial regulatory proteins, gntR family JHT19_18280 PF04393 Protein of unknown function (DUF535) JHT19_18285 PF01266 FAD dependent oxidoreductase JHT19_18290 PF18027 Cytosolic carboxypeptidase N-terminal domain JHT19_18290 PF00246 Zinc carboxypeptidase JHT19_18295 PF00691 OmpA family JHT19_18295 PF01389 OmpA-like transmembrane domain JHT19_18300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_18300 PF03466 LysR substrate binding domain JHT19_18310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_18310 PF03466 LysR substrate binding domain JHT19_18320 PF00854 POT family JHT19_18325 PF03315 Serine dehydratase beta chain JHT19_18325 PF03313 Serine dehydratase alpha chain JHT19_18345 PF00133 tRNA synthetases class I (I, L, M and V) JHT19_18345 PF08264 Anticodon-binding domain of tRNA JHT19_18350 PF01464 Transglycosylase SLT domain JHT19_18370 PF00460 Flagella basal body rod protein JHT19_18375 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JHT19_18375 PF00460 Flagella basal body rod protein JHT19_18380 PF03963 Flagellar hook capping protein - N-terminal region JHT19_18380 PF13860 FlgD Ig-like domain JHT19_18380 PF13861 FlgD Tudor-like domain JHT19_18385 PF07559 Flagellar basal body protein FlaE JHT19_18385 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JHT19_18385 PF00460 Flagella basal body rod protein JHT19_18390 PF00460 Flagella basal body rod protein JHT19_18390 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JHT19_18395 PF00460 Flagella basal body rod protein JHT19_18395 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JHT19_18400 PF02107 Flagellar L-ring protein JHT19_18405 PF02119 Flagellar P-ring protein JHT19_18410 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JHT19_18410 PF10135 Rod binding protein JHT19_18415 PF00460 Flagella basal body rod protein JHT19_18415 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JHT19_18420 PF00669 Bacterial flagellin N-terminal helical region JHT19_18440 PF01070 FMN-dependent dehydrogenase JHT19_18465 PF00581 Rhodanese-like domain JHT19_18470 PF00166 Chaperonin 10 Kd subunit JHT19_18475 PF00118 TCP-1/cpn60 chaperonin family JHT19_18495 PF03466 LysR substrate binding domain JHT19_18495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_18510 PF08359 YsiA-like protein, C-terminal region JHT19_18510 PF00440 Bacterial regulatory proteins, tetR family JHT19_18525 PF03060 Nitronate monooxygenase JHT19_18535 PF07971 Glycosyl hydrolase family 92 JHT19_18535 PF17678 Glycosyl hydrolase family 92 N-terminal domain JHT19_18545 PF07971 Glycosyl hydrolase family 92 JHT19_18545 PF17678 Glycosyl hydrolase family 92 N-terminal domain JHT19_18550 PF07971 Glycosyl hydrolase family 92 JHT19_18550 PF17678 Glycosyl hydrolase family 92 N-terminal domain JHT19_18565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_18565 PF03466 LysR substrate binding domain JHT19_18575 PF01641 SelR domain JHT19_18575 PF01625 Peptide methionine sulfoxide reductase JHT19_18580 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JHT19_18585 PF00455 DeoR C terminal sensor domain JHT19_18585 PF08220 DeoR-like helix-turn-helix domain JHT19_18595 PF06628 Catalase-related immune-responsive JHT19_18595 PF00199 Catalase JHT19_18605 PF00857 Isochorismatase family JHT19_18615 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JHT19_18615 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JHT19_18640 PF03466 LysR substrate binding domain JHT19_18640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_18645 PF01389 OmpA-like transmembrane domain JHT19_18645 PF00691 OmpA family JHT19_18655 PF06629 MltA-interacting protein MipA JHT19_18660 PF17185 NlpE C-terminal OB domain JHT19_18660 PF04170 NlpE N-terminal domain JHT19_18665 PF02001 Protein of unknown function DUF134 JHT19_18690 PF00679 Elongation factor G C-terminus JHT19_18690 PF03764 Elongation factor G, domain IV JHT19_18690 PF00009 Elongation factor Tu GTP binding domain JHT19_18690 PF14492 Elongation Factor G, domain II JHT19_18690 PF03144 Elongation factor Tu domain 2 JHT19_18695 PF13378 Enolase C-terminal domain-like JHT19_18695 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JHT19_18705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_18705 PF03466 LysR substrate binding domain JHT19_18715 PF09278 MerR, DNA binding JHT19_18715 PF00376 MerR family regulatory protein JHT19_18745 PF13533 Biotin-lipoyl like JHT19_18750 PF00873 AcrB/AcrD/AcrF family JHT19_18780 PF08402 TOBE domain JHT19_18780 PF00005 ABC transporter JHT19_18805 PF07702 UTRA domain JHT19_18805 PF00392 Bacterial regulatory proteins, gntR family JHT19_18815 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 JHT19_18815 PF00703 Glycosyl hydrolases family 2 JHT19_18815 PF02836 Glycosyl hydrolases family 2, TIM barrel domain JHT19_18815 PF02837 Glycosyl hydrolases family 2, sugar binding domain JHT19_18820 PF00196 Bacterial regulatory proteins, luxR family JHT19_18830 PF07694 5TMR of 5TMR-LYT JHT19_18830 PF00990 Diguanylate cyclase, GGDEF domain JHT19_18845 PF00873 AcrB/AcrD/AcrF family JHT19_18850 PF13533 Biotin-lipoyl like JHT19_18855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_18855 PF03466 LysR substrate binding domain JHT19_18865 PF13416 Bacterial extracellular solute-binding protein JHT19_18870 PF00579 tRNA synthetases class I (W and Y) JHT19_18885 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JHT19_18885 PF02896 PEP-utilising enzyme, TIM barrel domain JHT19_18885 PF00391 PEP-utilising enzyme, mobile domain JHT19_18890 PF03618 Kinase/pyrophosphorylase JHT19_18895 PF17763 Glutaminase/Asparaginase C-terminal domain JHT19_18895 PF00710 Asparaginase, N-terminal JHT19_18900 PF00709 Adenylosuccinate synthetase JHT19_18905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_18905 PF03466 LysR substrate binding domain JHT19_18920 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) JHT19_18940 PF00107 Zinc-binding dehydrogenase JHT19_18940 PF08240 Alcohol dehydrogenase GroES-like domain JHT19_18945 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JHT19_18955 PF03466 LysR substrate binding domain JHT19_18955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_18960 PF03466 LysR substrate binding domain JHT19_18960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_18970 PF00270 DEAD/DEAH box helicase JHT19_18970 PF00271 Helicase conserved C-terminal domain JHT19_19010 PF00155 Aminotransferase class I and II JHT19_19015 PF01497 Periplasmic binding protein JHT19_19015 PF12833 Helix-turn-helix domain JHT19_19045 PF05661 Protein of unknown function (DUF808) JHT19_19050 PF01979 Amidohydrolase family JHT19_19055 PF01679 Proteolipid membrane potential modulator JHT19_19060 PF03476 MOSC N-terminal beta barrel domain JHT19_19060 PF03473 MOSC domain JHT19_19060 PF00111 2Fe-2S iron-sulfur cluster binding domain JHT19_19060 PF03476 MOSC N-terminal beta barrel domain JHT19_19060 PF00111 2Fe-2S iron-sulfur cluster binding domain JHT19_19060 PF03473 MOSC domain JHT19_19065 PF02540 NAD synthase JHT19_19070 PF01467 Cytidylyltransferase-like JHT19_19115 PF01032 FecCD transport family JHT19_19125 PF02472 Biopolymer transport protein ExbD/TolR JHT19_19130 PF01618 MotA/TolQ/ExbB proton channel family JHT19_19135 PF03544 Gram-negative bacterial TonB protein C-terminal JHT19_19140 PF04055 Radical SAM superfamily JHT19_19145 PF06228 Haem utilisation ChuX/HutX JHT19_19150 PF01243 Pyridoxamine 5'-phosphate oxidase JHT19_19160 PF00072 Response regulator receiver domain JHT19_19160 PF01584 CheW-like domain JHT19_19180 PF16874 Glycosyl hydrolase family 36 C-terminal domain JHT19_19180 PF16875 Glycosyl hydrolase family 36 N-terminal domain JHT19_19190 PF11975 Family 4 glycosyl hydrolase C-terminal domain JHT19_19190 PF02056 Family 4 glycosyl hydrolase JHT19_19195 PF12833 Helix-turn-helix domain JHT19_19220 PF00141 Peroxidase JHT19_19225 PF00210 Ferritin-like domain JHT19_19230 PF03466 LysR substrate binding domain JHT19_19230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_19250 PF04151 Bacterial pre-peptidase C-terminal domain JHT19_19250 PF01752 Collagenase JHT19_19250 PF08453 Peptidase family M9 N-terminal JHT19_19260 PF00128 Alpha amylase, catalytic domain JHT19_19275 PF00999 Sodium/hydrogen exchanger family JHT19_19275 PF02254 TrkA-N domain JHT19_19280 PF02525 Flavodoxin-like fold JHT19_19285 PF00582 Universal stress protein family JHT19_19290 PF12848 ABC transporter JHT19_19290 PF16326 ABC transporter C-terminal domain JHT19_19290 PF00005 ABC transporter JHT19_19305 PF13533 Biotin-lipoyl like JHT19_19310 PF00873 AcrB/AcrD/AcrF family JHT19_19315 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) JHT19_19325 PF13302 Acetyltransferase (GNAT) domain JHT19_19335 PF00990 Diguanylate cyclase, GGDEF domain JHT19_19375 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JHT19_19375 PF01568 Molydopterin dinucleotide binding domain JHT19_19375 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JHT19_19375 PF12838 4Fe-4S dicluster domain JHT19_19375 PF00384 Molybdopterin oxidoreductase JHT19_19395 PF00005 ABC transporter JHT19_19405 PF00672 HAMP domain JHT19_19405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT19_19410 PF10282 Lactonase, 7-bladed beta-propeller JHT19_19415 PF02567 Phenazine biosynthesis-like protein JHT19_19420 PF01161 Phosphatidylethanolamine-binding protein JHT19_19430 PF01758 Sodium Bile acid symporter family JHT19_19445 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JHT19_19450 PF02378 Phosphotransferase system, EIIC JHT19_19450 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JHT19_19455 PF08240 Alcohol dehydrogenase GroES-like domain JHT19_19455 PF00107 Zinc-binding dehydrogenase JHT19_19490 PF03222 Tryptophan/tyrosine permease family JHT19_19500 PF02743 Cache domain JHT19_19500 PF00672 HAMP domain JHT19_19500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT19_19505 PF07670 Nucleoside recognition JHT19_19525 PF08525 Opacity-associated protein A N-terminal motif JHT19_19525 PF01476 LysM domain JHT19_19525 PF01551 Peptidase family M23 JHT19_19535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_19535 PF03466 LysR substrate binding domain JHT19_19550 PF00462 Glutaredoxin JHT19_19555 PF00892 EamA-like transporter family JHT19_19560 PF00267 Gram-negative porin JHT19_19570 PF01557 Fumarylacetoacetate (FAA) hydrolase family JHT19_19585 PF12833 Helix-turn-helix domain JHT19_19600 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JHT19_19600 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JHT19_19600 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JHT19_19600 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JHT19_19605 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JHT19_19605 PF02790 Cytochrome C oxidase subunit II, transmembrane domain JHT19_19615 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 JHT19_19640 PF02628 Cytochrome oxidase assembly protein JHT19_19645 PF01040 UbiA prenyltransferase family JHT19_19650 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JHT19_19650 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase JHT19_19680 PF00313 'Cold-shock' DNA-binding domain JHT19_19685 PF03889 Alternative ribosome-rescue factor A JHT19_19690 PF08447 PAS fold JHT19_19690 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT19_19690 PF13426 PAS domain JHT19_19710 PF00005 ABC transporter JHT19_19710 PF02687 FtsX-like permease family JHT19_19710 PF12704 MacB-like periplasmic core domain JHT19_19715 PF12704 MacB-like periplasmic core domain JHT19_19715 PF02687 FtsX-like permease family JHT19_19715 PF00005 ABC transporter JHT19_19725 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT19_19725 PF17200 Single Cache domain 2 JHT19_19725 PF00672 HAMP domain JHT19_19730 PF00210 Ferritin-like domain JHT19_19745 PF00465 Iron-containing alcohol dehydrogenase JHT19_19760 PF00892 EamA-like transporter family JHT19_19785 PF03466 LysR substrate binding domain JHT19_19785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_19795 PF00501 AMP-binding enzyme JHT19_19795 PF13193 AMP-binding enzyme C-terminal domain JHT19_19800 PF00351 Biopterin-dependent aromatic amino acid hydroxylase JHT19_19805 PF01329 Pterin 4 alpha carbinolamine dehydratase JHT19_19825 PF12843 Putative quorum-sensing-regulated virulence factor JHT19_19830 PF00270 DEAD/DEAH box helicase JHT19_19830 PF00271 Helicase conserved C-terminal domain JHT19_19835 PF09905 DNA-binding protein VF530 JHT19_19840 PF00291 Pyridoxal-phosphate dependent enzyme JHT19_19850 PF01470 Pyroglutamyl peptidase JHT19_19860 PF07683 Cobalamin synthesis protein cobW C-terminal domain JHT19_19860 PF02492 CobW/HypB/UreG, nucleotide-binding domain JHT19_19865 PF00270 DEAD/DEAH box helicase JHT19_19865 PF00271 Helicase conserved C-terminal domain JHT19_19885 PF00563 EAL domain JHT19_19885 PF12792 CSS motif domain associated with EAL JHT19_19890 PF00005 ABC transporter JHT19_19895 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT19_19895 PF00672 HAMP domain JHT19_19895 PF12729 Four helix bundle sensory module for signal transduction JHT19_19905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_19905 PF03466 LysR substrate binding domain JHT19_19910 PF00884 Sulfatase JHT19_19915 PF04055 Radical SAM superfamily JHT19_19915 PF13186 Iron-sulfur cluster-binding domain JHT19_19920 PF03466 LysR substrate binding domain JHT19_19920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_19930 PF01575 MaoC like domain JHT19_19935 PF12849 PBP superfamily domain JHT19_19945 PF12833 Helix-turn-helix domain JHT19_19950 PF00773 RNB domain JHT19_19950 PF00575 S1 RNA binding domain JHT19_19950 PF08206 Ribonuclease B OB domain JHT19_19955 PF00270 DEAD/DEAH box helicase JHT19_19955 PF00271 Helicase conserved C-terminal domain JHT19_19955 PF03880 DbpA RNA binding domain JHT19_19960 PF00563 EAL domain JHT19_19960 PF00990 Diguanylate cyclase, GGDEF domain JHT19_19960 PF13426 PAS domain JHT19_19965 PF00871 Acetokinase family JHT19_20025 PF00872 Transposase, Mutator family JHT19_20035 PF07745 Glycosyl hydrolase family 53 JHT19_20040 PF00356 Bacterial regulatory proteins, lacI family JHT19_20045 PF00005 ABC transporter JHT19_20045 PF17912 MalK OB fold domain JHT19_20050 PF13416 Bacterial extracellular solute-binding protein JHT19_20055 PF00528 Binding-protein-dependent transport system inner membrane component JHT19_20060 PF00528 Binding-protein-dependent transport system inner membrane component JHT19_20065 PF07745 Glycosyl hydrolase family 53 JHT19_20070 PF08533 Beta-galactosidase C-terminal domain JHT19_20070 PF02449 Beta-galactosidase JHT19_20070 PF08532 Beta-galactosidase trimerisation domain JHT19_20075 PF02264 LamB porin JHT19_20080 PF12729 Four helix bundle sensory module for signal transduction JHT19_20080 PF00672 HAMP domain JHT19_20080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT19_20085 PF16363 GDP-mannose 4,6 dehydratase JHT19_20095 PF10509 Galactokinase galactose-binding signature JHT19_20095 PF08544 GHMP kinases C terminal JHT19_20095 PF00288 GHMP kinases N terminal domain JHT19_20135 PF02463 RecF/RecN/SMC N terminal domain JHT19_20140 PF07804 HipA-like C-terminal domain JHT19_20140 PF13657 HipA N-terminal domain JHT19_20145 PF00106 short chain dehydrogenase JHT19_20155 PF03466 LysR substrate binding domain JHT19_20155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_20175 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JHT19_20180 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JHT19_20190 PF01638 HxlR-like helix-turn-helix JHT19_20215 PF01965 DJ-1/PfpI family JHT19_20235 PF10063 Uncharacterized integral membrane protein (DUF2301) JHT19_20240 PF00682 HMGL-like JHT19_20245 PF00378 Enoyl-CoA hydratase/isomerase JHT19_20250 PF01039 Carboxyl transferase domain JHT19_20255 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JHT19_20255 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JHT19_20255 PF02770 Acyl-CoA dehydrogenase, middle domain JHT19_20260 PF00376 MerR family regulatory protein JHT19_20260 PF09278 MerR, DNA binding JHT19_20265 PF02803 Thiolase, C-terminal domain JHT19_20265 PF00108 Thiolase, N-terminal domain JHT19_20270 PF00171 Aldehyde dehydrogenase family JHT19_20280 PF00378 Enoyl-CoA hydratase/isomerase JHT19_20285 PF00378 Enoyl-CoA hydratase/isomerase JHT19_20290 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JHT19_20290 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JHT19_20300 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JHT19_20300 PF06481 COX Aromatic Rich Motif JHT19_20305 PF00115 Cytochrome C and Quinol oxidase polypeptide I JHT19_20310 PF00510 Cytochrome c oxidase subunit III JHT19_20320 PF01040 UbiA prenyltransferase family JHT19_20330 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JHT19_20335 PF08031 Berberine and berberine like JHT19_20335 PF01565 FAD binding domain JHT19_20340 PF03466 LysR substrate binding domain JHT19_20340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_20355 PF03466 LysR substrate binding domain JHT19_20355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_20360 PF00005 ABC transporter JHT19_20365 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHT19_20370 PF00528 Binding-protein-dependent transport system inner membrane component JHT19_20375 PF00528 Binding-protein-dependent transport system inner membrane component JHT19_20385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_20385 PF03466 LysR substrate binding domain JHT19_20390 PF00043 Glutathione S-transferase, C-terminal domain JHT19_20390 PF02798 Glutathione S-transferase, N-terminal domain JHT19_20400 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JHT19_20400 PF00364 Biotin-requiring enzyme JHT19_20400 PF02817 e3 binding domain JHT19_20405 PF02780 Transketolase, C-terminal domain JHT19_20405 PF02779 Transketolase, pyrimidine binding domain JHT19_20410 PF00676 Dehydrogenase E1 component JHT19_20425 PF00012 Hsp70 protein JHT19_20430 PF04314 Copper chaperone PCu(A)C JHT19_20450 PF01497 Periplasmic binding protein JHT19_20455 PF01032 FecCD transport family JHT19_20460 PF01032 FecCD transport family JHT19_20465 PF00005 ABC transporter JHT19_20470 PF13411 MerR HTH family regulatory protein JHT19_20475 PF12833 Helix-turn-helix domain JHT19_20480 PF00593 TonB dependent receptor JHT19_20480 PF07715 TonB-dependent Receptor Plug Domain JHT19_20510 PF12805 FUSC-like inner membrane protein yccS JHT19_20515 PF13361 UvrD-like helicase C-terminal domain JHT19_20515 PF00580 UvrD/REP helicase N-terminal domain JHT19_20515 PF12462 DNA helicase IV / RNA helicase N terminal JHT19_20520 PF02142 MGS-like domain JHT19_20525 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JHT19_20530 PF00072 Response regulator receiver domain JHT19_20530 PF00672 HAMP domain JHT19_20530 PF01627 Hpt domain JHT19_20530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_20530 PF00512 His Kinase A (phospho-acceptor) domain JHT19_20545 PF00486 Transcriptional regulatory protein, C terminal JHT19_20545 PF00072 Response regulator receiver domain JHT19_20550 PF16385 Domain of unknown function JHT19_20550 PF00884 Sulfatase JHT19_20565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_20565 PF03466 LysR substrate binding domain JHT19_20570 PF00884 Sulfatase JHT19_20575 PF04055 Radical SAM superfamily JHT19_20575 PF13186 Iron-sulfur cluster-binding domain JHT19_20580 PF17863 AAA lid domain JHT19_20580 PF07726 ATPase family associated with various cellular activities (AAA) JHT19_20595 PF00092 von Willebrand factor type A domain JHT19_20610 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JHT19_20615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_20615 PF03466 LysR substrate binding domain JHT19_20620 PF00781 Diacylglycerol kinase catalytic domain JHT19_20625 PF04076 Bacterial OB fold (BOF) protein JHT19_20640 PF04055 Radical SAM superfamily JHT19_20640 PF13186 Iron-sulfur cluster-binding domain JHT19_20650 PF08774 VRR-NUC domain JHT19_20650 PF18081 Fanconi anemia-associated nuclease SAP domain JHT19_20665 PF01435 Peptidase family M48 JHT19_20670 PF04011 LemA family JHT19_20675 PF03606 C4-dicarboxylate anaerobic carrier JHT19_20685 PF00814 Glycoprotease family JHT19_20685 PF00583 Acetyltransferase (GNAT) family JHT19_20695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_20695 PF00072 Response regulator receiver domain JHT19_20700 PF00155 Aminotransferase class I and II JHT19_20705 PF01926 50S ribosome-binding GTPase JHT19_20715 PF04151 Bacterial pre-peptidase C-terminal domain JHT19_20715 PF01752 Collagenase JHT19_20715 PF08453 Peptidase family M9 N-terminal JHT19_20730 PF03466 LysR substrate binding domain JHT19_20730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_20750 PF00263 Bacterial type II and III secretion system protein JHT19_20750 PF04972 BON domain JHT19_20750 PF13629 Pilus formation protein N terminal region JHT19_20765 PF00437 Type II/IV secretion system protein JHT19_20800 PF00691 OmpA family JHT19_20800 PF05736 OprF membrane domain JHT19_20810 PF03466 LysR substrate binding domain JHT19_20810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_20815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_20815 PF03466 LysR substrate binding domain JHT19_20825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_20825 PF00072 Response regulator receiver domain JHT19_20825 PF09456 RcsC Alpha-Beta-Loop (ABL) JHT19_20825 PF00512 His Kinase A (phospho-acceptor) domain JHT19_20830 PF13188 PAS domain JHT19_20830 PF00563 EAL domain JHT19_20830 PF00990 Diguanylate cyclase, GGDEF domain JHT19_20830 PF03707 Bacterial signalling protein N terminal repeat JHT19_20835 PF00072 Response regulator receiver domain JHT19_20835 PF00196 Bacterial regulatory proteins, luxR family JHT19_20840 PF00990 Diguanylate cyclase, GGDEF domain JHT19_20850 PF00196 Bacterial regulatory proteins, luxR family JHT19_20850 PF00072 Response regulator receiver domain JHT19_20870 PF01584 CheW-like domain JHT19_20870 PF00072 Response regulator receiver domain JHT19_20885 PF00892 EamA-like transporter family JHT19_20895 PF01569 PAP2 superfamily JHT19_20905 PF07504 Fungalysin/Thermolysin Propeptide Motif JHT19_20905 PF03413 Peptidase propeptide and YPEB domain JHT19_20905 PF01447 Thermolysin metallopeptidase, catalytic domain JHT19_20905 PF04151 Bacterial pre-peptidase C-terminal domain JHT19_20905 PF02868 Thermolysin metallopeptidase, alpha-helical domain JHT19_20910 PF00893 Small Multidrug Resistance protein JHT19_20915 PF00892 EamA-like transporter family JHT19_20935 PF00171 Aldehyde dehydrogenase family JHT19_20945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_20945 PF00989 PAS fold JHT19_20945 PF17203 Single cache domain 3 JHT19_20945 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JHT19_20950 PF12431 Transcriptional regulator JHT19_20950 PF00072 Response regulator receiver domain JHT19_20960 PF13187 4Fe-4S dicluster domain JHT19_20960 PF01645 Conserved region in glutamate synthase JHT19_20970 PF09722 Protein of unknown function (DUF2384) JHT19_20980 PF01757 Acyltransferase family JHT19_20990 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JHT19_20995 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JHT19_21045 PF01327 Polypeptide deformylase JHT19_21050 PF00376 MerR family regulatory protein JHT19_21050 PF09278 MerR, DNA binding JHT19_21060 PF02253 Phospholipase A1 JHT19_21080 PF00664 ABC transporter transmembrane region JHT19_21080 PF00005 ABC transporter JHT19_21085 PF11490 DNA polymerase III polC-type N-terminus II JHT19_21085 PF07733 Bacterial DNA polymerase III alpha NTPase domain JHT19_21085 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JHT19_21085 PF14579 Helix-hairpin-helix motif JHT19_21085 PF02811 PHP domain JHT19_21085 PF00929 Exonuclease JHT19_21090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_21090 PF03466 LysR substrate binding domain JHT19_21095 PF01039 Carboxyl transferase domain JHT19_21095 PF17848 Acetyl-coA carboxylase zinc finger domain JHT19_21100 PF01212 Beta-eliminating lyase JHT19_21130 PF01597 Glycine cleavage H-protein JHT19_21135 PF00464 Serine hydroxymethyltransferase JHT19_21145 PF01571 Aminomethyltransferase folate-binding domain JHT19_21145 PF08669 Glycine cleavage T-protein C-terminal barrel domain JHT19_21165 PF00873 AcrB/AcrD/AcrF family JHT19_21175 PF02378 Phosphotransferase system, EIIC JHT19_21175 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JHT19_21180 PF00294 pfkB family carbohydrate kinase JHT19_21185 PF00381 PTS HPr component phosphorylation site JHT19_21185 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JHT19_21190 PF00356 Bacterial regulatory proteins, lacI family JHT19_21190 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JHT19_21205 PF01590 GAF domain JHT19_21205 PF00563 EAL domain JHT19_21205 PF00990 Diguanylate cyclase, GGDEF domain JHT19_21205 PF00989 PAS fold JHT19_21210 PF00528 Binding-protein-dependent transport system inner membrane component JHT19_21215 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHT19_21220 PF00528 Binding-protein-dependent transport system inner membrane component JHT19_21225 PF00005 ABC transporter JHT19_21230 PF00224 Pyruvate kinase, barrel domain JHT19_21230 PF02887 Pyruvate kinase, alpha/beta domain JHT19_21235 PF07690 Major Facilitator Superfamily JHT19_21245 PF00672 HAMP domain JHT19_21245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_21245 PF00512 His Kinase A (phospho-acceptor) domain JHT19_21250 PF02954 Bacterial regulatory protein, Fis family JHT19_21250 PF00072 Response regulator receiver domain JHT19_21250 PF14532 Sigma-54 interaction domain JHT19_21260 PF00465 Iron-containing alcohol dehydrogenase JHT19_21265 PF06719 AraC-type transcriptional regulator N-terminus JHT19_21265 PF12833 Helix-turn-helix domain JHT19_21270 PF00704 Glycosyl hydrolases family 18 JHT19_21270 PF06483 Chitinase C JHT19_21275 PF00483 Nucleotidyl transferase JHT19_21280 PF01268 Formate--tetrahydrofolate ligase JHT19_21285 PF00294 pfkB family carbohydrate kinase JHT19_21300 PF11849 Domain of unknown function (DUF3369) JHT19_21305 PF13419 Haloacid dehalogenase-like hydrolase JHT19_21310 PF00672 HAMP domain JHT19_21310 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT19_21315 PF04336 Acyl carrier protein phosphodiesterase JHT19_21320 PF00271 Helicase conserved C-terminal domain JHT19_21320 PF00270 DEAD/DEAH box helicase JHT19_21340 PF01292 Prokaryotic cytochrome b561 JHT19_21345 PF04264 YceI-like domain JHT19_21350 PF01226 Formate/nitrite transporter JHT19_21355 PF03466 LysR substrate binding domain JHT19_21355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_21360 PF06496 Protein of unknown function (DUF1097) JHT19_21365 PF11398 Protein of unknown function (DUF2813) JHT19_21370 PF00149 Calcineurin-like phosphoesterase JHT19_21370 PF02872 5'-nucleotidase, C-terminal domain JHT19_21375 PF03741 Integral membrane protein TerC family JHT19_21390 PF12262 Bacterial virulence factor lipase N-terminal JHT19_21395 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) JHT19_21410 PF03061 Thioesterase superfamily JHT19_21420 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JHT19_21420 PF12793 Sugar transport-related sRNA regulator N-term JHT19_21445 PF00226 DnaJ domain JHT19_21445 PF01556 DnaJ C terminal domain JHT19_21445 PF00684 DnaJ central domain JHT19_21455 PF00563 EAL domain JHT19_21455 PF00990 Diguanylate cyclase, GGDEF domain JHT19_21455 PF03707 Bacterial signalling protein N terminal repeat JHT19_21455 PF13188 PAS domain JHT19_21460 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase JHT19_21460 PF07055 Enoyl reductase FAD binding domain JHT19_21460 PF12241 Trans-2-enoyl-CoA reductase catalytic region JHT19_21465 PF13472 GDSL-like Lipase/Acylhydrolase family JHT19_21470 PF00005 ABC transporter JHT19_21485 PF02626 Carboxyltransferase domain, subdomain A and B JHT19_21490 PF02682 Carboxyltransferase domain, subdomain C and D JHT19_21495 PF03746 LamB/YcsF family JHT19_21500 PF08447 PAS fold JHT19_21500 PF00563 EAL domain JHT19_21500 PF00990 Diguanylate cyclase, GGDEF domain JHT19_21500 PF05231 MASE1 JHT19_21500 PF08448 PAS fold JHT19_21500 PF13426 PAS domain JHT19_21505 PF16363 GDP-mannose 4,6 dehydratase JHT19_21510 PF07715 TonB-dependent Receptor Plug Domain JHT19_21510 PF00593 TonB dependent receptor JHT19_21515 PF03466 LysR substrate binding domain JHT19_21515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_21520 PF13380 CoA binding domain JHT19_21520 PF00583 Acetyltransferase (GNAT) family JHT19_21520 PF13607 Succinyl-CoA ligase like flavodoxin domain JHT19_21540 PF01253 Translation initiation factor SUI1 JHT19_21555 PF05840 Bacteriophage replication gene A protein (GPA) JHT19_21585 PF03958 Bacterial type II/III secretion system short domain JHT19_21585 PF00263 Bacterial type II and III secretion system protein JHT19_21620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_21620 PF03466 LysR substrate binding domain JHT19_21630 PF00582 Universal stress protein family JHT19_21635 PF03701 Uncharacterised protein family (UPF0181) JHT19_21650 PF00072 Response regulator receiver domain JHT19_21650 PF00486 Transcriptional regulatory protein, C terminal JHT19_21660 PF02233 NAD(P) transhydrogenase beta subunit JHT19_21665 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch JHT19_21665 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JHT19_21665 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JHT19_21680 PF00990 Diguanylate cyclase, GGDEF domain JHT19_21690 PF01590 GAF domain JHT19_21690 PF00563 EAL domain JHT19_21690 PF00360 Phytochrome region JHT19_21690 PF00990 Diguanylate cyclase, GGDEF domain JHT19_21700 PF03459 TOBE domain JHT19_21700 PF00005 ABC transporter JHT19_21705 PF00528 Binding-protein-dependent transport system inner membrane component JHT19_21715 PF07685 CobB/CobQ-like glutamine amidotransferase domain JHT19_21720 PF04076 Bacterial OB fold (BOF) protein JHT19_21730 PF18030 RimK PreATP-grasp domain JHT19_21730 PF08443 RimK-like ATP-grasp domain JHT19_21735 PF00155 Aminotransferase class I and II JHT19_21740 PF12833 Helix-turn-helix domain JHT19_21755 PF03477 ATP cone domain JHT19_21755 PF13597 Anaerobic ribonucleoside-triphosphate reductase JHT19_21765 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JHT19_21770 PF00873 AcrB/AcrD/AcrF family JHT19_21780 PF04143 Sulphur transport JHT19_21795 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JHT19_21795 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHT19_21800 PF00384 Molybdopterin oxidoreductase JHT19_21805 PF03466 LysR substrate binding domain JHT19_21805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_21810 PF02634 FdhD/NarQ family JHT19_21815 PF07690 Major Facilitator Superfamily JHT19_21820 PF00196 Bacterial regulatory proteins, luxR family JHT19_21820 PF00072 Response regulator receiver domain JHT19_21825 PF05231 MASE1 JHT19_21825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_21825 PF07730 Histidine kinase JHT19_21830 PF07690 Major Facilitator Superfamily JHT19_21835 PF01238 Phosphomannose isomerase type I JHT19_21855 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JHT19_21855 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JHT19_21860 PF00085 Thioredoxin JHT19_21865 PF07690 Major Facilitator Superfamily JHT19_21870 PF12833 Helix-turn-helix domain JHT19_21870 PF07495 Y_Y_Y domain JHT19_21870 PF07494 Two component regulator propeller JHT19_21870 PF00072 Response regulator receiver domain JHT19_21870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_21870 PF00512 His Kinase A (phospho-acceptor) domain JHT19_21875 PF01554 MatE JHT19_21880 PF11756 Nitrous oxide-stimulated promoter JHT19_21895 PF00593 TonB dependent receptor JHT19_21895 PF07715 TonB-dependent Receptor Plug Domain JHT19_21905 PF03605 Anaerobic c4-dicarboxylate membrane transporter JHT19_21920 PF10414 Sirohaem synthase dimerisation region JHT19_21920 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JHT19_21920 PF14824 Sirohaem biosynthesis protein central JHT19_21925 PF01226 Formate/nitrite transporter JHT19_21930 PF13806 Rieske-like [2Fe-2S] domain JHT19_21935 PF04324 BFD-like [2Fe-2S] binding domain JHT19_21935 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JHT19_21935 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JHT19_21935 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHT19_21935 PF18267 Rubredoxin NAD+ reductase C-terminal domain JHT19_21940 PF01272 Transcription elongation factor, GreA/GreB, C-term JHT19_21940 PF14760 Rnk N-terminus JHT19_21975 PF13462 Thioredoxin JHT19_21975 PF06965 Na+/H+ antiporter 1 JHT19_21995 PF00128 Alpha amylase, catalytic domain JHT19_21995 PF09154 Domain of unknown function (DUF1939) JHT19_22010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT19_22010 PF00672 HAMP domain JHT19_22015 PF01168 Alanine racemase, N-terminal domain JHT19_22015 PF00842 Alanine racemase, C-terminal domain JHT19_22030 PF01565 FAD binding domain JHT19_22030 PF09330 D-lactate dehydrogenase, membrane binding JHT19_22035 PF03466 LysR substrate binding domain JHT19_22035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_22050 PF05762 VWA domain containing CoxE-like protein JHT19_22055 PF12592 Protein of unknown function (DUF3763) JHT19_22055 PF17868 AAA lid domain JHT19_22055 PF07728 AAA domain (dynein-related subfamily) JHT19_22065 PF01212 Beta-eliminating lyase JHT19_22070 PF00034 Cytochrome c JHT19_22075 PF03606 C4-dicarboxylate anaerobic carrier JHT19_22085 PF07690 Major Facilitator Superfamily JHT19_22095 PF08212 Lipocalin-like domain JHT19_22120 PF00149 Calcineurin-like phosphoesterase JHT19_22120 PF12320 Type 5 capsule protein repressor C-terminal domain JHT19_22135 PF06715 Gp5 C-terminal repeat (3 copies) JHT19_22135 PF04717 Type VI secretion system, phage-baseplate injector JHT19_22155 PF05947 Type VI secretion system, TssF JHT19_22170 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath JHT19_22175 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath JHT19_22180 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 JHT19_22200 PF06744 Type VI secretion protein IcmF C-terminal JHT19_22200 PF06761 Intracellular multiplication and human macrophage-killing JHT19_22200 PF14331 ImcF-related N-terminal domain JHT19_22205 PF13677 Membrane MotB of proton-channel complex MotA/MotB JHT19_22205 PF00691 OmpA family JHT19_22210 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE JHT19_22225 PF03793 PASTA domain JHT19_22225 PF00069 Protein kinase domain JHT19_22250 PF00211 Adenylate and Guanylate cyclase catalytic domain JHT19_22250 PF00072 Response regulator receiver domain JHT19_22265 PF08361 MAATS-type transcriptional repressor, C-terminal region JHT19_22265 PF00440 Bacterial regulatory proteins, tetR family JHT19_22285 PF00005 ABC transporter JHT19_22290 PF00528 Binding-protein-dependent transport system inner membrane component JHT19_22300 PF03861 ANTAR domain JHT19_22300 PF08376 Nitrate and nitrite sensing JHT19_22310 PF00591 Glycosyl transferase family, a/b domain JHT19_22310 PF02885 Glycosyl transferase family, helical bundle domain JHT19_22315 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JHT19_22315 PF14824 Sirohaem biosynthesis protein central JHT19_22315 PF10414 Sirohaem synthase dimerisation region JHT19_22320 PF00384 Molybdopterin oxidoreductase JHT19_22320 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JHT19_22320 PF01568 Molydopterin dinucleotide binding domain JHT19_22325 PF00583 Acetyltransferase (GNAT) family JHT19_22330 PF03222 Tryptophan/tyrosine permease family JHT19_22335 PF00072 Response regulator receiver domain JHT19_22335 PF00990 Diguanylate cyclase, GGDEF domain JHT19_22345 PF01483 Proprotein convertase P-domain JHT19_22345 PF00082 Subtilase family JHT19_22355 PF00245 Alkaline phosphatase JHT19_22370 PF00072 Response regulator receiver domain JHT19_22370 PF00486 Transcriptional regulatory protein, C terminal JHT19_22390 PF01048 Phosphorylase superfamily JHT19_22395 PF04973 Nicotinamide mononucleotide transporter JHT19_22400 PF00356 Bacterial regulatory proteins, lacI family JHT19_22405 PF00294 pfkB family carbohydrate kinase JHT19_22410 PF13407 Periplasmic binding protein domain JHT19_22415 PF02653 Branched-chain amino acid transport system / permease component JHT19_22420 PF00005 ABC transporter JHT19_22425 PF05025 RbsD / FucU transport protein family JHT19_22430 PF00990 Diguanylate cyclase, GGDEF domain JHT19_22430 PF00563 EAL domain JHT19_22435 PF01048 Phosphorylase superfamily JHT19_22475 PF04116 Fatty acid hydroxylase superfamily JHT19_22490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_22490 PF00512 His Kinase A (phospho-acceptor) domain JHT19_22490 PF00072 Response regulator receiver domain JHT19_22490 PF09308 LuxQ, periplasmic JHT19_22520 PF00881 Nitroreductase family JHT19_22525 PF00005 ABC transporter JHT19_22525 PF00571 CBS domain JHT19_22530 PF00528 Binding-protein-dependent transport system inner membrane component JHT19_22535 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JHT19_22540 PF05199 GMC oxidoreductase JHT19_22540 PF00732 GMC oxidoreductase JHT19_22545 PF00171 Aldehyde dehydrogenase family JHT19_22550 PF00440 Bacterial regulatory proteins, tetR family JHT19_22550 PF13977 BetI-type transcriptional repressor, C-terminal JHT19_22555 PF17151 Periplasmic sensor domain JHT19_22555 PF00990 Diguanylate cyclase, GGDEF domain JHT19_22565 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JHT19_22565 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JHT19_22575 PF00378 Enoyl-CoA hydratase/isomerase JHT19_22580 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JHT19_22580 PF02770 Acyl-CoA dehydrogenase, middle domain JHT19_22580 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JHT19_22585 PF00171 Aldehyde dehydrogenase family JHT19_22590 PF02803 Thiolase, C-terminal domain JHT19_22590 PF00108 Thiolase, N-terminal domain JHT19_22595 PF00376 MerR family regulatory protein JHT19_22595 PF09278 MerR, DNA binding JHT19_22600 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JHT19_22600 PF02770 Acyl-CoA dehydrogenase, middle domain JHT19_22600 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JHT19_22605 PF01039 Carboxyl transferase domain JHT19_22610 PF00378 Enoyl-CoA hydratase/isomerase JHT19_22615 PF18140 Propionyl-coenzyme A carboxylase BT domain JHT19_22615 PF00364 Biotin-requiring enzyme JHT19_22615 PF00289 Biotin carboxylase, N-terminal domain JHT19_22615 PF02785 Biotin carboxylase C-terminal domain JHT19_22615 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JHT19_22620 PF00682 HMGL-like JHT19_22625 PF00672 HAMP domain JHT19_22625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_22625 PF00512 His Kinase A (phospho-acceptor) domain JHT19_22625 PF01627 Hpt domain JHT19_22625 PF00072 Response regulator receiver domain JHT19_22625 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JHT19_22640 PF12795 Mechanosensitive ion channel porin domain JHT19_22640 PF12794 Mechanosensitive ion channel inner membrane domain 1 JHT19_22640 PF00924 Mechanosensitive ion channel JHT19_22645 PF14602 Hexapeptide repeat of succinyl-transferase JHT19_22645 PF12464 Maltose acetyltransferase JHT19_22650 PF00155 Aminotransferase class I and II JHT19_22650 PF00392 Bacterial regulatory proteins, gntR family JHT19_22655 PF01654 Cytochrome bd terminal oxidase subunit I JHT19_22670 PF02567 Phenazine biosynthesis-like protein JHT19_22675 PF02627 Carboxymuconolactone decarboxylase family JHT19_22680 PF13411 MerR HTH family regulatory protein JHT19_22690 PF00034 Cytochrome c JHT19_22705 PF00501 AMP-binding enzyme JHT19_22705 PF14535 AMP-binding enzyme C-terminal domain JHT19_22710 PF00005 ABC transporter JHT19_22735 PF12399 Branched-chain amino acid ATP-binding cassette transporter JHT19_22735 PF00005 ABC transporter JHT19_22745 PF01012 Electron transfer flavoprotein domain JHT19_22750 PF01012 Electron transfer flavoprotein domain JHT19_22750 PF00766 Electron transfer flavoprotein FAD-binding domain JHT19_22755 PF13193 AMP-binding enzyme C-terminal domain JHT19_22755 PF00501 AMP-binding enzyme JHT19_22805 PF00069 Protein kinase domain JHT19_22855 PF02954 Bacterial regulatory protein, Fis family JHT19_22855 PF00072 Response regulator receiver domain JHT19_22855 PF00158 Sigma-54 interaction domain JHT19_22865 PF00478 IMP dehydrogenase / GMP reductase domain JHT19_22870 PF01256 Carbohydrate kinase JHT19_22870 PF03853 YjeF-related protein N-terminus JHT19_22885 PF00248 Aldo/keto reductase family JHT19_22900 PF00654 Voltage gated chloride channel JHT19_22910 PF01566 Natural resistance-associated macrophage protein JHT19_22915 PF01227 GTP cyclohydrolase I JHT19_22920 PF03453 MoeA N-terminal region (domain I and II) JHT19_22920 PF03454 MoeA C-terminal region (domain IV) JHT19_22920 PF00994 Probable molybdopterin binding domain JHT19_22925 PF00899 ThiF family JHT19_22945 PF00581 Rhodanese-like domain JHT19_22950 PF00563 EAL domain JHT19_22950 PF03707 Bacterial signalling protein N terminal repeat JHT19_22950 PF00990 Diguanylate cyclase, GGDEF domain JHT19_22955 PF08329 Chitinase A, N-terminal domain JHT19_22955 PF00704 Glycosyl hydrolases family 18 JHT19_22965 PF00923 Transaldolase/Fructose-6-phosphate aldolase JHT19_22970 PF02780 Transketolase, C-terminal domain JHT19_22970 PF00456 Transketolase, thiamine diphosphate binding domain JHT19_22970 PF02779 Transketolase, pyrimidine binding domain JHT19_22975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT19_22975 PF08447 PAS fold JHT19_22980 PF07690 Major Facilitator Superfamily JHT19_22985 PF00793 DAHP synthetase I family JHT19_22990 PF00691 OmpA family JHT19_22990 PF01389 OmpA-like transmembrane domain JHT19_22995 PF13419 Haloacid dehalogenase-like hydrolase JHT19_23000 PF00472 RF-1 domain JHT19_23005 PF12729 Four helix bundle sensory module for signal transduction JHT19_23005 PF00672 HAMP domain JHT19_23005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT19_23010 PF00873 AcrB/AcrD/AcrF family JHT19_23015 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JHT19_23020 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JHT19_23025 PF07687 Peptidase dimerisation domain JHT19_23025 PF01546 Peptidase family M20/M25/M40 JHT19_23035 PF13737 Transposase DDE domain JHT19_23045 PF00196 Bacterial regulatory proteins, luxR family JHT19_23045 PF00072 Response regulator receiver domain JHT19_23050 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term JHT19_23050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_23050 PF07730 Histidine kinase JHT19_23050 PF00672 HAMP domain JHT19_23065 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JHT19_23065 PF00384 Molybdopterin oxidoreductase JHT19_23065 PF01568 Molydopterin dinucleotide binding domain JHT19_23070 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) JHT19_23075 PF03264 NapC/NirT cytochrome c family, N-terminal region JHT19_23085 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus JHT19_23085 PF00561 alpha/beta hydrolase fold JHT19_23095 PF02803 Thiolase, C-terminal domain JHT19_23095 PF00108 Thiolase, N-terminal domain JHT19_23100 PF00106 short chain dehydrogenase JHT19_23105 PF01810 LysE type translocator JHT19_23115 PF02355 Protein export membrane protein JHT19_23115 PF07549 SecD/SecF GG Motif JHT19_23120 PF02355 Protein export membrane protein JHT19_23120 PF13721 SecD export protein N-terminal TM region JHT19_23120 PF07549 SecD/SecF GG Motif JHT19_23145 PF01037 Lrp/AsnC ligand binding domain JHT19_23165 PF00529 HlyD membrane-fusion protein of T1SS JHT19_23165 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JHT19_23175 PF00072 Response regulator receiver domain JHT19_23175 PF09308 LuxQ, periplasmic JHT19_23175 PF00512 His Kinase A (phospho-acceptor) domain JHT19_23175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_23180 PF13407 Periplasmic binding protein domain JHT19_23185 PF01541 GIY-YIG catalytic domain JHT19_23200 PF04363 Protein of unknown function (DUF496) JHT19_23205 PF01554 MatE JHT19_23210 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JHT19_23215 PF00672 HAMP domain JHT19_23215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_23215 PF00512 His Kinase A (phospho-acceptor) domain JHT19_23215 PF01627 Hpt domain JHT19_23215 PF00072 Response regulator receiver domain JHT19_23215 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) JHT19_23220 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JHT19_23220 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JHT19_23235 PF03466 LysR substrate binding domain JHT19_23235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_23240 PF01037 Lrp/AsnC ligand binding domain JHT19_23240 PF13404 AsnC-type helix-turn-helix domain JHT19_23245 PF13520 Amino acid permease JHT19_23250 PF00155 Aminotransferase class I and II JHT19_23250 PF00392 Bacterial regulatory proteins, gntR family JHT19_23260 PF03109 ABC1 family JHT19_23265 PF01769 Divalent cation transporter JHT19_23265 PF00571 CBS domain JHT19_23265 PF03448 MgtE intracellular N domain JHT19_23270 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin JHT19_23275 PF07969 Amidohydrolase family JHT19_23285 PF01966 HD domain JHT19_23295 PF07690 Major Facilitator Superfamily JHT19_23305 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JHT19_23310 PF00255 Glutathione peroxidase JHT19_23325 PF01323 DSBA-like thioredoxin domain JHT19_23340 PF00106 short chain dehydrogenase JHT19_23345 PF00072 Response regulator receiver domain JHT19_23345 PF00486 Transcriptional regulatory protein, C terminal JHT19_23350 PF00672 HAMP domain JHT19_23350 PF00512 His Kinase A (phospho-acceptor) domain JHT19_23350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_23360 PF01219 Prokaryotic diacylglycerol kinase JHT19_23365 PF08019 Phosphoethanolamine transferase EptA/EptB JHT19_23365 PF00884 Sulfatase JHT19_23370 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JHT19_23395 PF01047 MarR family JHT19_23405 PF01734 Patatin-like phospholipase JHT19_23410 PF02678 Pirin JHT19_23410 PF05726 Pirin C-terminal cupin domain JHT19_23415 PF00313 'Cold-shock' DNA-binding domain JHT19_23425 PF00962 Adenosine/AMP deaminase JHT19_23430 PF08534 Redoxin JHT19_23430 PF00462 Glutaredoxin JHT19_23450 PF00768 D-alanyl-D-alanine carboxypeptidase JHT19_23450 PF07943 Penicillin-binding protein 5, C-terminal domain JHT19_23455 PF02798 Glutathione S-transferase, N-terminal domain JHT19_23460 PF02909 Tetracyclin repressor-like, C-terminal domain JHT19_23460 PF00440 Bacterial regulatory proteins, tetR family JHT19_23465 PF01872 RibD C-terminal domain JHT19_23520 PF00528 Binding-protein-dependent transport system inner membrane component JHT19_23525 PF00528 Binding-protein-dependent transport system inner membrane component JHT19_23525 PF14785 Maltose transport system permease protein MalF P2 domain JHT19_23530 PF01547 Bacterial extracellular solute-binding protein JHT19_23535 PF00005 ABC transporter JHT19_23535 PF08402 TOBE domain JHT19_23555 PF02706 Chain length determinant protein JHT19_23555 PF13614 AAA domain JHT19_23555 PF13807 G-rich domain on putative tyrosine kinase JHT19_23565 PF00534 Glycosyl transferases group 1 JHT19_23565 PF13439 Glycosyltransferase Family 4 JHT19_23595 PF04266 ASCH domain JHT19_23600 PF00440 Bacterial regulatory proteins, tetR family JHT19_23600 PF16925 Tetracyclin repressor-like, C-terminal domain JHT19_23605 PF16884 N-terminal domain of oxidoreductase JHT19_23605 PF00107 Zinc-binding dehydrogenase JHT19_23610 PF13417 Glutathione S-transferase, N-terminal domain JHT19_23615 PF06628 Catalase-related immune-responsive JHT19_23615 PF00199 Catalase JHT19_23620 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JHT19_23620 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JHT19_23630 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JHT19_23640 PF12833 Helix-turn-helix domain JHT19_23645 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JHT19_23645 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JHT19_23650 PF01238 Phosphomannose isomerase type I JHT19_23660 PF13419 Haloacid dehalogenase-like hydrolase JHT19_23665 PF00127 Copper binding proteins, plastocyanin/azurin family JHT19_23670 PF00563 EAL domain JHT19_23670 PF00990 Diguanylate cyclase, GGDEF domain JHT19_23670 PF03707 Bacterial signalling protein N terminal repeat JHT19_23675 PF02386 Cation transport protein JHT19_23680 PF02254 TrkA-N domain JHT19_23680 PF02080 TrkA-C domain JHT19_23685 PF00486 Transcriptional regulatory protein, C terminal JHT19_23685 PF00072 Response regulator receiver domain JHT19_23690 PF13493 Domain of unknown function (DUF4118) JHT19_23690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_23690 PF00512 His Kinase A (phospho-acceptor) domain JHT19_23690 PF02702 Osmosensitive K+ channel His kinase sensor domain JHT19_23690 PF13493 Domain of unknown function (DUF4118) JHT19_23690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_23690 PF00512 His Kinase A (phospho-acceptor) domain JHT19_23690 PF02702 Osmosensitive K+ channel His kinase sensor domain JHT19_23695 PF00005 ABC transporter JHT19_23695 PF00664 ABC transporter transmembrane region JHT19_23700 PF07715 TonB-dependent Receptor Plug Domain JHT19_23700 PF00593 TonB dependent receptor JHT19_23705 PF00005 ABC transporter JHT19_23710 PF01497 Periplasmic binding protein JHT19_23715 PF01032 FecCD transport family JHT19_23725 PF01389 OmpA-like transmembrane domain JHT19_23725 PF00691 OmpA family JHT19_23740 PF00529 HlyD membrane-fusion protein of T1SS JHT19_23745 PF00664 ABC transporter transmembrane region JHT19_23745 PF00005 ABC transporter JHT19_23755 PF00196 Bacterial regulatory proteins, luxR family JHT19_23760 PF00196 Bacterial regulatory proteins, luxR family JHT19_23770 PF02743 Cache domain JHT19_23770 PF00672 HAMP domain JHT19_23770 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT19_23775 PF07726 ATPase family associated with various cellular activities (AAA) JHT19_23775 PF17863 AAA lid domain JHT19_23780 PF01882 Protein of unknown function DUF58 JHT19_23790 PF13519 von Willebrand factor type A domain JHT19_23795 PF13519 von Willebrand factor type A domain JHT19_23810 PF00005 ABC transporter JHT19_23815 PF00528 Binding-protein-dependent transport system inner membrane component JHT19_23820 PF00528 Binding-protein-dependent transport system inner membrane component JHT19_23825 PF12849 PBP superfamily domain JHT19_23830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT19_23830 PF00672 HAMP domain JHT19_23850 PF07715 TonB-dependent Receptor Plug Domain JHT19_23850 PF00593 TonB dependent receptor JHT19_23855 PF00326 Prolyl oligopeptidase family JHT19_23855 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain JHT19_23860 PF00270 DEAD/DEAH box helicase JHT19_23860 PF00271 Helicase conserved C-terminal domain JHT19_23870 PF17969 L,D-transpeptidase C-terminal domain JHT19_23870 PF01476 LysM domain JHT19_23870 PF03734 L,D-transpeptidase catalytic domain JHT19_23875 PF00875 DNA photolyase JHT19_23875 PF03441 FAD binding domain of DNA photolyase JHT19_23880 PF13411 MerR HTH family regulatory protein JHT19_23890 PF01048 Phosphorylase superfamily JHT19_23905 PF00990 Diguanylate cyclase, GGDEF domain JHT19_23910 PF11742 Protein of unknown function (DUF3302) JHT19_23915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion JHT19_23915 PF00529 HlyD membrane-fusion protein of T1SS JHT19_23920 PF07155 ECF-type riboflavin transporter, S component JHT19_23925 PF00005 ABC transporter JHT19_23925 PF12558 ATP-binding cassette cobalt transporter JHT19_23940 PF13237 4Fe-4S dicluster domain JHT19_23940 PF12801 4Fe-4S binding domain JHT19_23945 PF12800 4Fe-4S binding domain JHT19_23945 PF12838 4Fe-4S dicluster domain JHT19_23950 PF00583 Acetyltransferase (GNAT) family JHT19_23965 PF12945 Flagellar protein YcgR JHT19_23965 PF07238 PilZ domain JHT19_23970 PF00672 HAMP domain JHT19_23970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT19_23990 PF00326 Prolyl oligopeptidase family JHT19_23990 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain JHT19_23995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_23995 PF03466 LysR substrate binding domain JHT19_24000 PF02652 L-lactate permease JHT19_24005 PF01070 FMN-dependent dehydrogenase JHT19_24015 PF00924 Mechanosensitive ion channel JHT19_24020 PF00194 Eukaryotic-type carbonic anhydrase JHT19_24050 PF00107 Zinc-binding dehydrogenase JHT19_24050 PF08240 Alcohol dehydrogenase GroES-like domain JHT19_24055 PF00155 Aminotransferase class I and II JHT19_24060 PF03707 Bacterial signalling protein N terminal repeat JHT19_24060 PF00563 EAL domain JHT19_24060 PF00990 Diguanylate cyclase, GGDEF domain JHT19_24065 PF00497 Bacterial extracellular solute-binding proteins, family 3 JHT19_24075 PF13737 Transposase DDE domain JHT19_24085 PF00080 Copper/zinc superoxide dismutase (SODC) JHT19_24090 PF08448 PAS fold JHT19_24090 PF13426 PAS domain JHT19_24090 PF00072 Response regulator receiver domain JHT19_24090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_24090 PF00512 His Kinase A (phospho-acceptor) domain JHT19_24095 PF00486 Transcriptional regulatory protein, C terminal JHT19_24095 PF00072 Response regulator receiver domain JHT19_24115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_24115 PF03466 LysR substrate binding domain JHT19_24150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_24150 PF03466 LysR substrate binding domain JHT19_24175 PF01706 FliG C-terminal domain JHT19_24175 PF14842 FliG N-terminal domain JHT19_24175 PF14841 FliG middle domain JHT19_24180 PF01514 Secretory protein of YscJ/FliF family JHT19_24180 PF08345 Flagellar M-ring protein C-terminal JHT19_24185 PF02049 Flagellar hook-basal body complex protein FliE JHT19_24190 PF02954 Bacterial regulatory protein, Fis family JHT19_24190 PF00072 Response regulator receiver domain JHT19_24190 PF00158 Sigma-54 interaction domain JHT19_24205 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JHT19_24210 PF00813 FliP family JHT19_24215 PF01313 Bacterial export proteins, family 3 JHT19_24220 PF01311 Bacterial export proteins, family 1 JHT19_24230 PF00771 FHIPEP family JHT19_24240 PF00669 Bacterial flagellin N-terminal helical region JHT19_24240 PF00700 Bacterial flagellin C-terminal helical region JHT19_24255 PF02561 Flagellar protein FliS JHT19_24270 PF03748 Flagellar basal body-associated protein FliL JHT19_24275 PF04545 Sigma-70, region 4 JHT19_24275 PF04542 Sigma-70 region 2 JHT19_24280 PF01618 MotA/TolQ/ExbB proton channel family JHT19_24285 PF13677 Membrane MotB of proton-channel complex MotA/MotB JHT19_24285 PF00691 OmpA family JHT19_24295 PF08000 Bacterial PH domain JHT19_24315 PF02901 Pyruvate formate lyase-like JHT19_24315 PF01228 Glycine radical JHT19_24320 PF04055 Radical SAM superfamily JHT19_24325 PF00923 Transaldolase/Fructose-6-phosphate aldolase JHT19_24335 PF00583 Acetyltransferase (GNAT) family JHT19_24350 PF07690 Major Facilitator Superfamily JHT19_24355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_24355 PF03466 LysR substrate binding domain JHT19_24360 PF00892 EamA-like transporter family JHT19_24380 PF13533 Biotin-lipoyl like JHT19_24390 PF01594 AI-2E family transporter JHT19_24395 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) JHT19_24405 PF00175 Oxidoreductase NAD-binding domain JHT19_24405 PF00970 Oxidoreductase FAD-binding domain JHT19_24415 PF09905 DNA-binding protein VF530 JHT19_24420 PF03466 LysR substrate binding domain JHT19_24420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_24430 PF00881 Nitroreductase family JHT19_24435 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term JHT19_24435 PF12833 Helix-turn-helix domain JHT19_24440 PF00128 Alpha amylase, catalytic domain JHT19_24440 PF00686 Starch binding domain JHT19_24445 PF07943 Penicillin-binding protein 5, C-terminal domain JHT19_24445 PF00768 D-alanyl-D-alanine carboxypeptidase JHT19_24450 PF00561 alpha/beta hydrolase fold JHT19_24460 PF00581 Rhodanese-like domain JHT19_24460 PF17773 UPF0176 acylphosphatase like domain JHT19_24465 PF18416 N-acetylglucosamine binding protein domain 2 JHT19_24465 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading JHT19_24470 PF01734 Patatin-like phospholipase JHT19_24475 PF01914 MarC family integral membrane protein JHT19_24480 PF00881 Nitroreductase family JHT19_24485 PF18412 Outer-membrane lipoprotein Wza C-terminal domain JHT19_24485 PF10531 SLBB domain JHT19_24485 PF02563 Polysaccharide biosynthesis/export protein JHT19_24490 PF01451 Low molecular weight phosphotyrosine protein phosphatase JHT19_24495 PF13614 AAA domain JHT19_24495 PF13807 G-rich domain on putative tyrosine kinase JHT19_24495 PF02706 Chain length determinant protein JHT19_24505 PF08803 Putative mono-oxygenase ydhR JHT19_24510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_24510 PF03466 LysR substrate binding domain JHT19_24520 PF00375 Sodium:dicarboxylate symporter family JHT19_24525 PF06803 Protein of unknown function (DUF1232) JHT19_24530 PF07687 Peptidase dimerisation domain JHT19_24530 PF01546 Peptidase family M20/M25/M40 JHT19_24535 PF07670 Nucleoside recognition JHT19_24540 PF07670 Nucleoside recognition JHT19_24555 PF00912 Transglycosylase JHT19_24560 PF00128 Alpha amylase, catalytic domain JHT19_24560 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JHT19_24560 PF02806 Alpha amylase, C-terminal all-beta domain JHT19_24565 PF02446 4-alpha-glucanotransferase JHT19_24570 PF00343 Carbohydrate phosphorylase JHT19_24575 PF00196 Bacterial regulatory proteins, luxR family JHT19_24575 PF17874 MalT-like TPR region JHT19_24590 PF02630 SCO1/SenC JHT19_24600 PF00367 phosphotransferase system, EIIB JHT19_24600 PF02378 Phosphotransferase system, EIIC JHT19_24605 PF03193 RsgA GTPase JHT19_24610 PF00375 Sodium:dicarboxylate symporter family JHT19_24620 PF08543 Phosphomethylpyrimidine kinase JHT19_24630 PF13520 Amino acid permease JHT19_24635 PF01276 Orn/Lys/Arg decarboxylase, major domain JHT19_24635 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JHT19_24635 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain JHT19_24650 PF17967 Pullulanase N2 domain JHT19_24650 PF03714 Bacterial pullanase-associated domain JHT19_24650 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JHT19_24650 PF18494 Pullulanase Ins domain JHT19_24650 PF11852 Domain of unknown function (DUF3372) JHT19_24655 PF04231 Endonuclease I JHT19_24660 PF00128 Alpha amylase, catalytic domain JHT19_24660 PF02903 Alpha amylase, N-terminal ig-like domain JHT19_24660 PF16657 Maltogenic Amylase, C-terminal domain JHT19_24675 PF02264 LamB porin JHT19_24680 PF00128 Alpha amylase, catalytic domain JHT19_24680 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JHT19_24710 PF00675 Insulinase (Peptidase family M16) JHT19_24710 PF05193 Peptidase M16 inactive domain JHT19_24715 PF17200 Single Cache domain 2 JHT19_24715 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT19_24715 PF00672 HAMP domain JHT19_24720 PF00005 ABC transporter JHT19_24725 PF01032 FecCD transport family JHT19_24730 PF01032 FecCD transport family JHT19_24735 PF01497 Periplasmic binding protein JHT19_24740 PF07715 TonB-dependent Receptor Plug Domain JHT19_24740 PF07660 Secretin and TonB N terminus short domain JHT19_24740 PF00593 TonB dependent receptor JHT19_24745 PF07715 TonB-dependent Receptor Plug Domain JHT19_24745 PF00593 TonB dependent receptor JHT19_24750 PF00206 Lyase JHT19_24750 PF02655 ATP-grasp domain JHT19_24755 PF06276 Ferric iron reductase FhuF-like transporter JHT19_24755 PF04183 IucA / IucC family JHT19_24765 PF06276 Ferric iron reductase FhuF-like transporter JHT19_24765 PF04183 IucA / IucC family JHT19_24770 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JHT19_24770 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JHT19_24775 PF01547 Bacterial extracellular solute-binding protein JHT19_24780 PF00512 His Kinase A (phospho-acceptor) domain JHT19_24780 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_24780 PF08521 Two-component sensor kinase N-terminal JHT19_24785 PF00072 Response regulator receiver domain JHT19_24785 PF00486 Transcriptional regulatory protein, C terminal JHT19_24790 PF02378 Phosphotransferase system, EIIC JHT19_24790 PF00367 phosphotransferase system, EIIB JHT19_24800 PF01136 Peptidase family U32 JHT19_24805 PF02653 Branched-chain amino acid transport system / permease component JHT19_24810 PF00005 ABC transporter JHT19_24815 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JHT19_24820 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JHT19_24820 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JHT19_24825 PF00596 Class II Aldolase and Adducin N-terminal domain JHT19_24830 PF11762 L-arabinose isomerase C-terminal domain JHT19_24830 PF02610 L-arabinose isomerase JHT19_24840 PF12833 Helix-turn-helix domain JHT19_24840 PF02311 AraC-like ligand binding domain JHT19_24855 PF02566 OsmC-like protein JHT19_24860 PF01047 MarR family JHT19_24865 PF10417 C-terminal domain of 1-Cys peroxiredoxin JHT19_24865 PF00578 AhpC/TSA family JHT19_24870 PF07992 Pyridine nucleotide-disulphide oxidoreductase JHT19_24870 PF13192 Thioredoxin domain JHT19_24885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_24885 PF03466 LysR substrate binding domain JHT19_24890 PF01965 DJ-1/PfpI family JHT19_24890 PF12833 Helix-turn-helix domain JHT19_24895 PF08281 Sigma-70, region 4 JHT19_24895 PF04542 Sigma-70 region 2 JHT19_24905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JHT19_24905 PF00672 HAMP domain JHT19_24905 PF02743 Cache domain JHT19_24910 PF03466 LysR substrate binding domain JHT19_24910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JHT19_24915 PF11975 Family 4 glycosyl hydrolase C-terminal domain JHT19_24915 PF02056 Family 4 glycosyl hydrolase JHT19_24930 PF03473 MOSC domain JHT19_24930 PF03475 3-alpha domain JHT19_24935 PF00271 Helicase conserved C-terminal domain JHT19_24935 PF00270 DEAD/DEAH box helicase JHT19_24940 PF03786 D-mannonate dehydratase (UxuA) JHT19_24945 PF00392 Bacterial regulatory proteins, gntR family JHT19_24945 PF07729 FCD domain JHT19_24950 PF03480 Bacterial extracellular solute-binding protein, family 7 JHT19_24955 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component JHT19_24960 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component JHT19_24965 PF01232 Mannitol dehydrogenase Rossmann domain JHT19_24965 PF08125 Mannitol dehydrogenase C-terminal domain JHT19_24970 PF02614 Glucuronate isomerase JHT19_24975 PF00294 pfkB family carbohydrate kinase JHT19_24980 PF01081 KDPG and KHG aldolase JHT19_24985 PF10688 Bacterial inner membrane protein JHT19_25000 PF06719 AraC-type transcriptional regulator N-terminus JHT19_25000 PF12833 Helix-turn-helix domain JHT19_25010 PF00005 ABC transporter JHT19_25010 PF00664 ABC transporter transmembrane region JHT19_25020 PF01037 Lrp/AsnC ligand binding domain JHT19_25055 PF00474 Sodium:solute symporter family JHT19_25065 PF18327 Proline utilization A proline dehydrogenase N-terminal domain JHT19_25065 PF14850 DNA-binding domain of Proline dehydrogenase JHT19_25065 PF00171 Aldehyde dehydrogenase family JHT19_25065 PF01619 Proline dehydrogenase JHT19_25070 PF12833 Helix-turn-helix domain JHT19_25080 PF01243 Pyridoxamine 5'-phosphate oxidase JHT19_25080 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region JHT19_25085 PF00512 His Kinase A (phospho-acceptor) domain JHT19_25085 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JHT19_25085 PF02743 Cache domain JHT19_25090 PF02954 Bacterial regulatory protein, Fis family JHT19_25090 PF00072 Response regulator receiver domain JHT19_25090 PF00158 Sigma-54 interaction domain JHT19_25095 PF00529 HlyD membrane-fusion protein of T1SS JHT19_25130 PF00437 Type II/IV secretion system protein JHT19_25160 PF03743 Bacterial conjugation TrbI-like protein JHT19_25170 PF03524 Conjugal transfer protein JHT19_25195 PF03135 CagE, TrbE, VirB family, component of type IV transporter system JHT19_25200 PF05101 Type IV secretory pathway, VirB3-like protein JHT19_25205 PF04956 TrbC/VIRB2 family JHT19_25220 PF04754 Putative transposase, YhgA-like JHT19_25225 PF13614 AAA domain JHT19_25250 PF13304 AAA domain, putative AbiEii toxin, Type IV TA system JHT19_25270 PF13737 Transposase DDE domain JHT19_25280 PF13737 Transposase DDE domain JHT19_25315 PF13737 Transposase DDE domain JHT19_25320 PF02384 N-6 DNA Methylase JHT19_25320 PF07669 Eco57I restriction-modification methylase JHT19_25340 PF01848 Hok/gef family JHT19_25370 PF08401 Domain of unknown function (DUF1738) JHT19_25370 PF18818 Metallopeptidase superfamily domain JHT19_25370 PF13362 Toprim domain JHT19_25400 PF01751 Toprim domain JHT19_25400 PF01131 DNA topoisomerase JHT19_25460 PF01464 Transglycosylase SLT domain JHT19_25465 PF10502 Signal peptidase, peptidase S26 JHT19_25480 PF01848 Hok/gef family JHT19_25505 PF03230 Antirestriction protein JHT19_25525 PF01751 Toprim domain JHT19_25525 PF01131 DNA topoisomerase JHT19_25575 PF01464 Transglycosylase SLT domain JHT19_25600 PF01848 Hok/gef family JHT19_25640 PF00437 Type II/IV secretion system protein JHT19_25665 PF03743 Bacterial conjugation TrbI-like protein JHT19_25675 PF03524 Conjugal transfer protein JHT19_25705 PF03135 CagE, TrbE, VirB family, component of type IV transporter system JHT19_25710 PF05101 Type IV secretory pathway, VirB3-like protein JHT19_25760 PF13614 AAA domain JHT19_25785 PF00239 Resolvase, N terminal domain JHT19_25785 PF02796 Helix-turn-helix domain of resolvase JHT19_25835 PF00691 OmpA family JHT19_25880 PF01797 Transposase IS200 like JHT19_25920 PF00239 Resolvase, N terminal domain JHT19_25920 PF02796 Helix-turn-helix domain of resolvase JHT19_25965 PF02368 Bacterial Ig-like domain (group 2) JHT19_25965 PF11999 Protein of unknown function (DUF3494) JHT19_26010 PF02796 Helix-turn-helix domain of resolvase JHT19_26010 PF00239 Resolvase, N terminal domain JHT19_26075 PF18818 Metallopeptidase superfamily domain JHT19_26075 PF13362 Toprim domain JHT19_26075 PF08401 Domain of unknown function (DUF1738) JHT19_26085 PF03230 Antirestriction protein JHT19_26110 PF01751 Toprim domain JHT19_26110 PF01131 DNA topoisomerase JHT19_26170 PF01464 Transglycosylase SLT domain JHT19_26185 PF01848 Hok/gef family JHT19_26225 PF00437 Type II/IV secretion system protein JHT19_26255 PF03743 Bacterial conjugation TrbI-like protein JHT19_26270 PF04335 VirB8 protein JHT19_26280 PF00437 Type II/IV secretion system protein JHT19_26290 PF03135 CagE, TrbE, VirB family, component of type IV transporter system JHT19_26300 PF04956 TrbC/VIRB2 family