locus-tag class description FKM99_00010 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FKM99_00010 PF00005 ABC transporter FKM99_00015 PF00005 ABC transporter FKM99_00015 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FKM99_00030 PF13614 AAA domain FKM99_00030 PF18607 ParA helix turn helix domain FKM99_00035 PF08775 ParB family FKM99_00035 PF02195 ParB-like nuclease domain FKM99_00040 PF05127 Helicase FKM99_00040 PF13718 GNAT acetyltransferase 2 FKM99_00050 PF00132 Bacterial transferase hexapeptide (six repeats) FKM99_00055 PF03466 LysR substrate binding domain FKM99_00055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_00060 PF03575 Peptidase family S51 FKM99_00065 PF00267 Gram-negative porin FKM99_00070 PF02378 Phosphotransferase system, EIIC FKM99_00070 PF00367 phosphotransferase system, EIIB FKM99_00075 PF01380 SIS domain FKM99_00085 PF01380 SIS domain FKM99_00085 PF01418 Helix-turn-helix domain, rpiR family FKM99_00090 PF00246 Zinc carboxypeptidase FKM99_00095 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FKM99_00100 PF03358 NADPH-dependent FMN reductase FKM99_00110 PF00005 ABC transporter FKM99_00110 PF00664 ABC transporter transmembrane region FKM99_00110 PF03412 Peptidase C39 family FKM99_00125 PF00529 HlyD membrane-fusion protein of T1SS FKM99_00130 PF02954 Bacterial regulatory protein, Fis family FKM99_00130 PF00158 Sigma-54 interaction domain FKM99_00130 PF00072 Response regulator receiver domain FKM99_00135 PF02743 Cache domain FKM99_00135 PF00512 His Kinase A (phospho-acceptor) domain FKM99_00135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_00140 PF01243 Pyridoxamine 5'-phosphate oxidase FKM99_00140 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FKM99_00155 PF12833 Helix-turn-helix domain FKM99_00160 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FKM99_00160 PF14850 DNA-binding domain of Proline dehydrogenase FKM99_00160 PF01619 Proline dehydrogenase FKM99_00160 PF00171 Aldehyde dehydrogenase family FKM99_00170 PF00474 Sodium:solute symporter family FKM99_00205 PF01037 Lrp/AsnC ligand binding domain FKM99_00215 PF00664 ABC transporter transmembrane region FKM99_00215 PF00005 ABC transporter FKM99_00225 PF12833 Helix-turn-helix domain FKM99_00225 PF06719 AraC-type transcriptional regulator N-terminus FKM99_00245 PF10688 Bacterial inner membrane protein FKM99_00250 PF01081 KDPG and KHG aldolase FKM99_00255 PF00294 pfkB family carbohydrate kinase FKM99_00260 PF02614 Glucuronate isomerase FKM99_00265 PF08125 Mannitol dehydrogenase C-terminal domain FKM99_00265 PF01232 Mannitol dehydrogenase Rossmann domain FKM99_00270 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FKM99_00275 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FKM99_00280 PF03480 Bacterial extracellular solute-binding protein, family 7 FKM99_00285 PF07729 FCD domain FKM99_00285 PF00392 Bacterial regulatory proteins, gntR family FKM99_00290 PF03786 D-mannonate dehydratase (UxuA) FKM99_00295 PF00270 DEAD/DEAH box helicase FKM99_00295 PF00271 Helicase conserved C-terminal domain FKM99_00300 PF03473 MOSC domain FKM99_00300 PF03475 3-alpha domain FKM99_00315 PF11975 Family 4 glycosyl hydrolase C-terminal domain FKM99_00315 PF02056 Family 4 glycosyl hydrolase FKM99_00320 PF03466 LysR substrate binding domain FKM99_00320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_00325 PF12729 Four helix bundle sensory module for signal transduction FKM99_00325 PF00672 HAMP domain FKM99_00325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FKM99_00340 PF08281 Sigma-70, region 4 FKM99_00340 PF04542 Sigma-70 region 2 FKM99_00345 PF01965 DJ-1/PfpI family FKM99_00345 PF12833 Helix-turn-helix domain FKM99_00380 PF07992 Pyridine nucleotide-disulphide oxidoreductase FKM99_00380 PF13192 Thioredoxin domain FKM99_00385 PF10417 C-terminal domain of 1-Cys peroxiredoxin FKM99_00385 PF00578 AhpC/TSA family FKM99_00390 PF01047 MarR family FKM99_00395 PF02566 OsmC-like protein FKM99_00410 PF12833 Helix-turn-helix domain FKM99_00410 PF02311 AraC-like ligand binding domain FKM99_00420 PF11762 L-arabinose isomerase C-terminal domain FKM99_00420 PF02610 L-arabinose isomerase FKM99_00425 PF00596 Class II Aldolase and Adducin N-terminal domain FKM99_00430 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FKM99_00430 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FKM99_00435 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FKM99_00440 PF00005 ABC transporter FKM99_00445 PF02653 Branched-chain amino acid transport system / permease component FKM99_00460 PF00367 phosphotransferase system, EIIB FKM99_00460 PF02378 Phosphotransferase system, EIIC FKM99_00470 PF00072 Response regulator receiver domain FKM99_00470 PF00486 Transcriptional regulatory protein, C terminal FKM99_00475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_00475 PF08521 Two-component sensor kinase N-terminal FKM99_00475 PF00512 His Kinase A (phospho-acceptor) domain FKM99_00480 PF01547 Bacterial extracellular solute-binding protein FKM99_00485 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FKM99_00485 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FKM99_00490 PF04183 IucA / IucC family FKM99_00490 PF06276 Ferric iron reductase FhuF-like transporter FKM99_00495 PF07690 Major Facilitator Superfamily FKM99_00500 PF04183 IucA / IucC family FKM99_00500 PF06276 Ferric iron reductase FhuF-like transporter FKM99_00505 PF02655 ATP-grasp domain FKM99_00505 PF00206 Lyase FKM99_00510 PF00593 TonB dependent receptor FKM99_00510 PF07715 TonB-dependent Receptor Plug Domain FKM99_00515 PF07715 TonB-dependent Receptor Plug Domain FKM99_00515 PF00593 TonB dependent receptor FKM99_00515 PF07660 Secretin and TonB N terminus short domain FKM99_00520 PF01497 Periplasmic binding protein FKM99_00525 PF01032 FecCD transport family FKM99_00530 PF01032 FecCD transport family FKM99_00535 PF00005 ABC transporter FKM99_00540 PF00672 HAMP domain FKM99_00540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FKM99_00540 PF17200 Single Cache domain 2 FKM99_00545 PF05193 Peptidase M16 inactive domain FKM99_00545 PF00675 Insulinase (Peptidase family M16) FKM99_00555 PF04225 Opacity-associated protein A LysM-like domain FKM99_00555 PF01551 Peptidase family M23 FKM99_00565 PF07690 Major Facilitator Superfamily FKM99_00575 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FKM99_00575 PF00128 Alpha amylase, catalytic domain FKM99_00580 PF02264 LamB porin FKM99_00595 PF16657 Maltogenic Amylase, C-terminal domain FKM99_00595 PF02903 Alpha amylase, N-terminal ig-like domain FKM99_00595 PF00128 Alpha amylase, catalytic domain FKM99_00605 PF04231 Endonuclease I FKM99_00610 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FKM99_00610 PF17967 Pullulanase N2 domain FKM99_00610 PF11852 Domain of unknown function (DUF3372) FKM99_00610 PF03714 Bacterial pullanase-associated domain FKM99_00610 PF18494 Pullulanase Ins domain FKM99_00625 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain FKM99_00625 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain FKM99_00625 PF01276 Orn/Lys/Arg decarboxylase, major domain FKM99_00630 PF13520 Amino acid permease FKM99_00640 PF08543 Phosphomethylpyrimidine kinase FKM99_00650 PF00375 Sodium:dicarboxylate symporter family FKM99_00655 PF03193 RsgA GTPase FKM99_00660 PF00367 phosphotransferase system, EIIB FKM99_00660 PF02378 Phosphotransferase system, EIIC FKM99_00670 PF02630 SCO1/SenC FKM99_00685 PF17874 MalT-like TPR region FKM99_00685 PF00196 Bacterial regulatory proteins, luxR family FKM99_00700 PF00343 Carbohydrate phosphorylase FKM99_00705 PF02446 4-alpha-glucanotransferase FKM99_00710 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FKM99_00710 PF00128 Alpha amylase, catalytic domain FKM99_00710 PF02806 Alpha amylase, C-terminal all-beta domain FKM99_00840 PF00226 DnaJ domain FKM99_00840 PF01556 DnaJ C terminal domain FKM99_00840 PF00684 DnaJ central domain FKM99_00995 PF00912 Transglycosylase FKM99_01000 PF00128 Alpha amylase, catalytic domain FKM99_01015 PF07670 Nucleoside recognition FKM99_01020 PF07670 Nucleoside recognition FKM99_01025 PF01546 Peptidase family M20/M25/M40 FKM99_01025 PF07687 Peptidase dimerisation domain FKM99_01030 PF06803 Protein of unknown function (DUF1232) FKM99_01035 PF00375 Sodium:dicarboxylate symporter family FKM99_01045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_01045 PF03466 LysR substrate binding domain FKM99_01050 PF08803 Putative mono-oxygenase ydhR FKM99_01060 PF13614 AAA domain FKM99_01060 PF02706 Chain length determinant protein FKM99_01060 PF13807 G-rich domain on putative tyrosine kinase FKM99_01065 PF01451 Low molecular weight phosphotyrosine protein phosphatase FKM99_01070 PF02563 Polysaccharide biosynthesis/export protein FKM99_01070 PF10531 SLBB domain FKM99_01070 PF18412 Outer-membrane lipoprotein Wza C-terminal domain FKM99_01080 PF00881 Nitroreductase family FKM99_01085 PF01914 MarC family integral membrane protein FKM99_01090 PF01734 Patatin-like phospholipase FKM99_01095 PF18416 N-acetylglucosamine binding protein domain 2 FKM99_01095 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading FKM99_01110 PF00561 alpha/beta hydrolase fold FKM99_01115 PF00768 D-alanyl-D-alanine carboxypeptidase FKM99_01115 PF07943 Penicillin-binding protein 5, C-terminal domain FKM99_01120 PF00128 Alpha amylase, catalytic domain FKM99_01120 PF00686 Starch binding domain FKM99_01125 PF12833 Helix-turn-helix domain FKM99_01125 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FKM99_01130 PF00881 Nitroreductase family FKM99_01140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_01140 PF03466 LysR substrate binding domain FKM99_01145 PF09905 DNA-binding protein VF530 FKM99_01155 PF00175 Oxidoreductase NAD-binding domain FKM99_01155 PF00970 Oxidoreductase FAD-binding domain FKM99_01165 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) FKM99_01170 PF01594 AI-2E family transporter FKM99_01180 PF13533 Biotin-lipoyl like FKM99_01205 PF00892 EamA-like transporter family FKM99_01210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_01210 PF03466 LysR substrate binding domain FKM99_01215 PF07690 Major Facilitator Superfamily FKM99_01225 PF00583 Acetyltransferase (GNAT) family FKM99_01235 PF00923 Transaldolase/Fructose-6-phosphate aldolase FKM99_01240 PF04055 Radical SAM superfamily FKM99_01285 PF08000 Bacterial PH domain FKM99_01295 PF00691 OmpA family FKM99_01295 PF13677 Membrane MotB of proton-channel complex MotA/MotB FKM99_01300 PF01618 MotA/TolQ/ExbB proton channel family FKM99_01305 PF04545 Sigma-70, region 4 FKM99_01305 PF04542 Sigma-70 region 2 FKM99_01310 PF03748 Flagellar basal body-associated protein FliL FKM99_01325 PF02561 Flagellar protein FliS FKM99_01330 PF02465 Flagellar hook-associated protein 2 N-terminus FKM99_01330 PF07195 Flagellar hook-associated protein 2 C-terminus FKM99_01330 PF07196 Flagellin hook IN motif FKM99_01340 PF00700 Bacterial flagellin C-terminal helical region FKM99_01340 PF00669 Bacterial flagellin N-terminal helical region FKM99_01350 PF00771 FHIPEP family FKM99_01355 PF01312 FlhB HrpN YscU SpaS Family FKM99_01360 PF01311 Bacterial export proteins, family 1 FKM99_01365 PF01313 Bacterial export proteins, family 3 FKM99_01370 PF00813 FliP family FKM99_01375 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FKM99_01390 PF00158 Sigma-54 interaction domain FKM99_01390 PF02954 Bacterial regulatory protein, Fis family FKM99_01390 PF00072 Response regulator receiver domain FKM99_01395 PF02049 Flagellar hook-basal body complex protein FliE FKM99_01400 PF01514 Secretory protein of YscJ/FliF family FKM99_01400 PF08345 Flagellar M-ring protein C-terminal FKM99_01405 PF14841 FliG middle domain FKM99_01405 PF14842 FliG N-terminal domain FKM99_01405 PF01706 FliG C-terminal domain FKM99_01415 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FKM99_01415 PF18269 T3SS EscN ATPase C-terminal domain FKM99_01430 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_01430 PF03466 LysR substrate binding domain FKM99_01465 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FKM99_01470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_01470 PF03466 LysR substrate binding domain FKM99_01500 PF00486 Transcriptional regulatory protein, C terminal FKM99_01500 PF00072 Response regulator receiver domain FKM99_01505 PF00072 Response regulator receiver domain FKM99_01505 PF13426 PAS domain FKM99_01505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_01505 PF08448 PAS fold FKM99_01505 PF00512 His Kinase A (phospho-acceptor) domain FKM99_01510 PF00080 Copper/zinc superoxide dismutase (SODC) FKM99_01515 PF00266 Aminotransferase class-V FKM99_01520 PF00497 Bacterial extracellular solute-binding proteins, family 3 FKM99_01525 PF03707 Bacterial signalling protein N terminal repeat FKM99_01525 PF00990 Diguanylate cyclase, GGDEF domain FKM99_01525 PF00563 EAL domain FKM99_01530 PF00155 Aminotransferase class I and II FKM99_01535 PF00107 Zinc-binding dehydrogenase FKM99_01535 PF08240 Alcohol dehydrogenase GroES-like domain FKM99_01565 PF00194 Eukaryotic-type carbonic anhydrase FKM99_01570 PF00924 Mechanosensitive ion channel FKM99_01580 PF01070 FMN-dependent dehydrogenase FKM99_01585 PF02652 L-lactate permease FKM99_01590 PF03466 LysR substrate binding domain FKM99_01590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_01595 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FKM99_01595 PF00326 Prolyl oligopeptidase family FKM99_01600 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FKM99_01600 PF00005 ABC transporter FKM99_01610 PF05362 Lon protease (S16) C-terminal proteolytic domain FKM99_01610 PF13654 AAA domain FKM99_01615 PF00672 HAMP domain FKM99_01615 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FKM99_01620 PF12945 Flagellar protein YcgR FKM99_01620 PF07238 PilZ domain FKM99_01640 PF00583 Acetyltransferase (GNAT) family FKM99_01645 PF12800 4Fe-4S binding domain FKM99_01645 PF12838 4Fe-4S dicluster domain FKM99_01650 PF13237 4Fe-4S dicluster domain FKM99_01650 PF12801 4Fe-4S binding domain FKM99_01665 PF00005 ABC transporter FKM99_01665 PF12558 ATP-binding cassette cobalt transporter FKM99_01670 PF07155 ECF-type riboflavin transporter, S component FKM99_01675 PF00529 HlyD membrane-fusion protein of T1SS FKM99_01675 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FKM99_01680 PF11742 Protein of unknown function (DUF3302) FKM99_01685 PF00990 Diguanylate cyclase, GGDEF domain FKM99_01700 PF01048 Phosphorylase superfamily FKM99_01710 PF08349 Protein of unknown function (DUF1722) FKM99_01715 PF13411 MerR HTH family regulatory protein FKM99_01720 PF03441 FAD binding domain of DNA photolyase FKM99_01720 PF00875 DNA photolyase FKM99_01725 PF17969 L,D-transpeptidase C-terminal domain FKM99_01725 PF03734 L,D-transpeptidase catalytic domain FKM99_01725 PF01476 LysM domain FKM99_01735 PF00270 DEAD/DEAH box helicase FKM99_01735 PF00271 Helicase conserved C-terminal domain FKM99_01740 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FKM99_01740 PF00326 Prolyl oligopeptidase family FKM99_01745 PF07715 TonB-dependent Receptor Plug Domain FKM99_01745 PF00593 TonB dependent receptor FKM99_01765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FKM99_01765 PF00672 HAMP domain FKM99_01770 PF12849 PBP superfamily domain FKM99_01775 PF00528 Binding-protein-dependent transport system inner membrane component FKM99_01780 PF00528 Binding-protein-dependent transport system inner membrane component FKM99_01785 PF00005 ABC transporter FKM99_01800 PF13519 von Willebrand factor type A domain FKM99_01800 PF07584 Aerotolerance regulator N-terminal FKM99_01805 PF13519 von Willebrand factor type A domain FKM99_01815 PF01882 Protein of unknown function DUF58 FKM99_01820 PF07726 ATPase family associated with various cellular activities (AAA) FKM99_01820 PF17863 AAA lid domain FKM99_01830 PF02743 Cache domain FKM99_01830 PF00672 HAMP domain FKM99_01830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FKM99_01840 PF00196 Bacterial regulatory proteins, luxR family FKM99_01845 PF00196 Bacterial regulatory proteins, luxR family FKM99_01855 PF00005 ABC transporter FKM99_01855 PF00664 ABC transporter transmembrane region FKM99_01860 PF00529 HlyD membrane-fusion protein of T1SS FKM99_01875 PF01389 OmpA-like transmembrane domain FKM99_01875 PF00691 OmpA family FKM99_01885 PF01032 FecCD transport family FKM99_01890 PF01497 Periplasmic binding protein FKM99_01895 PF00005 ABC transporter FKM99_01900 PF00593 TonB dependent receptor FKM99_01900 PF07715 TonB-dependent Receptor Plug Domain FKM99_01905 PF00005 ABC transporter FKM99_01905 PF00664 ABC transporter transmembrane region FKM99_01910 PF00512 His Kinase A (phospho-acceptor) domain FKM99_01910 PF00989 PAS fold FKM99_01910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_01910 PF16736 Single Cache-like FKM99_01915 PF00486 Transcriptional regulatory protein, C terminal FKM99_01915 PF00072 Response regulator receiver domain FKM99_01920 PF02254 TrkA-N domain FKM99_01920 PF02080 TrkA-C domain FKM99_01925 PF02386 Cation transport protein FKM99_01930 PF03707 Bacterial signalling protein N terminal repeat FKM99_01930 PF00563 EAL domain FKM99_01930 PF00990 Diguanylate cyclase, GGDEF domain FKM99_01935 PF00127 Copper binding proteins, plastocyanin/azurin family FKM99_01940 PF13419 Haloacid dehalogenase-like hydrolase FKM99_01950 PF01238 Phosphomannose isomerase type I FKM99_01955 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FKM99_01955 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FKM99_01960 PF12833 Helix-turn-helix domain FKM99_01970 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FKM99_01980 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FKM99_01980 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FKM99_01985 PF06628 Catalase-related immune-responsive FKM99_01985 PF00199 Catalase FKM99_01990 PF13417 Glutathione S-transferase, N-terminal domain FKM99_01995 PF16884 N-terminal domain of oxidoreductase FKM99_01995 PF00107 Zinc-binding dehydrogenase FKM99_02000 PF16925 Tetracyclin repressor-like, C-terminal domain FKM99_02000 PF00440 Bacterial regulatory proteins, tetR family FKM99_02035 PF00534 Glycosyl transferases group 1 FKM99_02035 PF13439 Glycosyltransferase Family 4 FKM99_02045 PF13614 AAA domain FKM99_02045 PF02706 Chain length determinant protein FKM99_02045 PF13807 G-rich domain on putative tyrosine kinase FKM99_02060 PF02397 Bacterial sugar transferase FKM99_02065 PF00005 ABC transporter FKM99_02065 PF08402 TOBE domain FKM99_02070 PF01547 Bacterial extracellular solute-binding protein FKM99_02075 PF00528 Binding-protein-dependent transport system inner membrane component FKM99_02075 PF14785 Maltose transport system permease protein MalF P2 domain FKM99_02080 PF00528 Binding-protein-dependent transport system inner membrane component FKM99_02110 PF05661 Protein of unknown function (DUF808) FKM99_02115 PF01979 Amidohydrolase family FKM99_02125 PF01679 Proteolipid membrane potential modulator FKM99_02135 PF00111 2Fe-2S iron-sulfur cluster binding domain FKM99_02135 PF03473 MOSC domain FKM99_02135 PF00111 2Fe-2S iron-sulfur cluster binding domain FKM99_02135 PF03473 MOSC domain FKM99_02135 PF03476 MOSC N-terminal beta barrel domain FKM99_02135 PF03476 MOSC N-terminal beta barrel domain FKM99_02140 PF02540 NAD synthase FKM99_02145 PF01467 Cytidylyltransferase-like FKM99_02190 PF00005 ABC transporter FKM99_02195 PF01032 FecCD transport family FKM99_02205 PF02472 Biopolymer transport protein ExbD/TolR FKM99_02210 PF01618 MotA/TolQ/ExbB proton channel family FKM99_02215 PF03544 Gram-negative bacterial TonB protein C-terminal FKM99_02220 PF04055 Radical SAM superfamily FKM99_02225 PF06228 Haem utilisation ChuX/HutX FKM99_02230 PF01243 Pyridoxamine 5'-phosphate oxidase FKM99_02240 PF01584 CheW-like domain FKM99_02240 PF00072 Response regulator receiver domain FKM99_02275 PF00271 Helicase conserved C-terminal domain FKM99_02275 PF08494 DEAD/H associated FKM99_02275 PF00270 DEAD/DEAH box helicase FKM99_02300 PF00141 Peroxidase FKM99_02305 PF00210 Ferritin-like domain FKM99_02315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_02315 PF03466 LysR substrate binding domain FKM99_02330 PF04151 Bacterial pre-peptidase C-terminal domain FKM99_02330 PF01752 Collagenase FKM99_02330 PF08453 Peptidase family M9 N-terminal FKM99_02340 PF00128 Alpha amylase, catalytic domain FKM99_02355 PF02254 TrkA-N domain FKM99_02355 PF00999 Sodium/hydrogen exchanger family FKM99_02360 PF02525 Flavodoxin-like fold FKM99_02365 PF00582 Universal stress protein family FKM99_02375 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FKM99_02375 PF00326 Prolyl oligopeptidase family FKM99_02385 PF13533 Biotin-lipoyl like FKM99_02390 PF00873 AcrB/AcrD/AcrF family FKM99_02395 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FKM99_02405 PF13302 Acetyltransferase (GNAT) domain FKM99_02415 PF00990 Diguanylate cyclase, GGDEF domain FKM99_02415 PF13185 GAF domain FKM99_02435 PF00873 AcrB/AcrD/AcrF family FKM99_02460 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FKM99_02460 PF12838 4Fe-4S dicluster domain FKM99_02460 PF00384 Molybdopterin oxidoreductase FKM99_02460 PF01568 Molydopterin dinucleotide binding domain FKM99_02460 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FKM99_02480 PF00005 ABC transporter FKM99_02490 PF00672 HAMP domain FKM99_02490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FKM99_02500 PF10282 Lactonase, 7-bladed beta-propeller FKM99_02505 PF02567 Phenazine biosynthesis-like protein FKM99_02510 PF01161 Phosphatidylethanolamine-binding protein FKM99_02520 PF01758 Sodium Bile acid symporter family FKM99_02540 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FKM99_02545 PF02378 Phosphotransferase system, EIIC FKM99_02545 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FKM99_02550 PF00107 Zinc-binding dehydrogenase FKM99_02550 PF08240 Alcohol dehydrogenase GroES-like domain FKM99_02585 PF03222 Tryptophan/tyrosine permease family FKM99_02595 PF00672 HAMP domain FKM99_02595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FKM99_02595 PF02743 Cache domain FKM99_02625 PF01551 Peptidase family M23 FKM99_02625 PF08525 Opacity-associated protein A N-terminal motif FKM99_02625 PF01476 LysM domain FKM99_02630 PF00563 EAL domain FKM99_02630 PF08447 PAS fold FKM99_02630 PF08448 PAS fold FKM99_02630 PF00990 Diguanylate cyclase, GGDEF domain FKM99_02635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_02635 PF03466 LysR substrate binding domain FKM99_02640 PF07690 Major Facilitator Superfamily FKM99_02660 PF00462 Glutaredoxin FKM99_02665 PF00892 EamA-like transporter family FKM99_02670 PF00267 Gram-negative porin FKM99_02680 PF01557 Fumarylacetoacetate (FAA) hydrolase family FKM99_02695 PF12833 Helix-turn-helix domain FKM99_02700 PF01810 LysE type translocator FKM99_02710 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FKM99_02710 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FKM99_02710 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FKM99_02710 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FKM99_02715 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FKM99_02715 PF02790 Cytochrome C oxidase subunit II, transmembrane domain FKM99_02720 PF00115 Cytochrome C and Quinol oxidase polypeptide I FKM99_02725 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 FKM99_02730 PF00510 Cytochrome c oxidase subunit III FKM99_02750 PF02628 Cytochrome oxidase assembly protein FKM99_02755 PF01040 UbiA prenyltransferase family FKM99_02760 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FKM99_02760 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FKM99_02795 PF00313 'Cold-shock' DNA-binding domain FKM99_02800 PF03889 Alternative ribosome-rescue factor A FKM99_02805 PF08447 PAS fold FKM99_02805 PF13426 PAS domain FKM99_02805 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FKM99_02815 PF00990 Diguanylate cyclase, GGDEF domain FKM99_02830 PF00005 ABC transporter FKM99_02830 PF02687 FtsX-like permease family FKM99_02830 PF12704 MacB-like periplasmic core domain FKM99_02835 PF12704 MacB-like periplasmic core domain FKM99_02835 PF02687 FtsX-like permease family FKM99_02835 PF00005 ABC transporter FKM99_02845 PF17200 Single Cache domain 2 FKM99_02845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FKM99_02845 PF00672 HAMP domain FKM99_02850 PF00210 Ferritin-like domain FKM99_02860 PF07995 Glucose / Sorbosone dehydrogenase FKM99_02865 PF00465 Iron-containing alcohol dehydrogenase FKM99_02880 PF00892 EamA-like transporter family FKM99_02900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_02900 PF03466 LysR substrate binding domain FKM99_02910 PF13193 AMP-binding enzyme C-terminal domain FKM99_02910 PF00501 AMP-binding enzyme FKM99_02915 PF00351 Biopterin-dependent aromatic amino acid hydroxylase FKM99_02920 PF01329 Pterin 4 alpha carbinolamine dehydratase FKM99_02945 PF12843 Putative quorum-sensing-regulated virulence factor FKM99_02950 PF00270 DEAD/DEAH box helicase FKM99_02950 PF00271 Helicase conserved C-terminal domain FKM99_02955 PF09905 DNA-binding protein VF530 FKM99_02960 PF00291 Pyridoxal-phosphate dependent enzyme FKM99_02970 PF01470 Pyroglutamyl peptidase FKM99_02980 PF07683 Cobalamin synthesis protein cobW C-terminal domain FKM99_02980 PF02492 CobW/HypB/UreG, nucleotide-binding domain FKM99_02985 PF00270 DEAD/DEAH box helicase FKM99_02985 PF00271 Helicase conserved C-terminal domain FKM99_03005 PF00563 EAL domain FKM99_03005 PF12792 CSS motif domain associated with EAL FKM99_03010 PF00005 ABC transporter FKM99_03015 PF12729 Four helix bundle sensory module for signal transduction FKM99_03015 PF00672 HAMP domain FKM99_03015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FKM99_03030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_03030 PF03466 LysR substrate binding domain FKM99_03035 PF00884 Sulfatase FKM99_03040 PF13186 Iron-sulfur cluster-binding domain FKM99_03040 PF04055 Radical SAM superfamily FKM99_03045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_03045 PF03466 LysR substrate binding domain FKM99_03060 PF00069 Protein kinase domain FKM99_03060 PF03793 PASTA domain FKM99_03065 PF00069 Protein kinase domain FKM99_03095 PF12849 PBP superfamily domain FKM99_03105 PF12833 Helix-turn-helix domain FKM99_03110 PF08206 Ribonuclease B OB domain FKM99_03110 PF00773 RNB domain FKM99_03110 PF00575 S1 RNA binding domain FKM99_03115 PF03880 DbpA RNA binding domain FKM99_03115 PF00271 Helicase conserved C-terminal domain FKM99_03115 PF00270 DEAD/DEAH box helicase FKM99_03120 PF13426 PAS domain FKM99_03120 PF00563 EAL domain FKM99_03120 PF00990 Diguanylate cyclase, GGDEF domain FKM99_03130 PF00871 Acetokinase family FKM99_03135 PF13426 PAS domain FKM99_03135 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FKM99_03135 PF08447 PAS fold FKM99_03145 PF10063 Uncharacterized integral membrane protein (DUF2301) FKM99_03150 PF00682 HMGL-like FKM99_03155 PF00378 Enoyl-CoA hydratase/isomerase FKM99_03160 PF01039 Carboxyl transferase domain FKM99_03165 PF02770 Acyl-CoA dehydrogenase, middle domain FKM99_03165 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FKM99_03165 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FKM99_03170 PF09278 MerR, DNA binding FKM99_03170 PF00376 MerR family regulatory protein FKM99_03175 PF00108 Thiolase, N-terminal domain FKM99_03175 PF02803 Thiolase, C-terminal domain FKM99_03180 PF00171 Aldehyde dehydrogenase family FKM99_03190 PF00378 Enoyl-CoA hydratase/isomerase FKM99_03195 PF00378 Enoyl-CoA hydratase/isomerase FKM99_03200 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FKM99_03200 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FKM99_03210 PF06481 COX Aromatic Rich Motif FKM99_03210 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FKM99_03215 PF00115 Cytochrome C and Quinol oxidase polypeptide I FKM99_03220 PF00510 Cytochrome c oxidase subunit III FKM99_03230 PF01040 UbiA prenyltransferase family FKM99_03245 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FKM99_03250 PF01565 FAD binding domain FKM99_03250 PF08031 Berberine and berberine like FKM99_03255 PF03466 LysR substrate binding domain FKM99_03255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_03270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_03270 PF03466 LysR substrate binding domain FKM99_03280 PF00005 ABC transporter FKM99_03285 PF00497 Bacterial extracellular solute-binding proteins, family 3 FKM99_03290 PF00528 Binding-protein-dependent transport system inner membrane component FKM99_03295 PF00528 Binding-protein-dependent transport system inner membrane component FKM99_03305 PF03466 LysR substrate binding domain FKM99_03305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_03310 PF00043 Glutathione S-transferase, C-terminal domain FKM99_03310 PF02798 Glutathione S-transferase, N-terminal domain FKM99_03320 PF02817 e3 binding domain FKM99_03320 PF00364 Biotin-requiring enzyme FKM99_03320 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FKM99_03325 PF02779 Transketolase, pyrimidine binding domain FKM99_03325 PF02780 Transketolase, C-terminal domain FKM99_03330 PF00676 Dehydrogenase E1 component FKM99_03345 PF00012 Hsp70 protein FKM99_03350 PF04314 Copper chaperone PCu(A)C FKM99_03380 PF00486 Transcriptional regulatory protein, C terminal FKM99_03380 PF00072 Response regulator receiver domain FKM99_03405 PF00082 Subtilase family FKM99_03405 PF01483 Proprotein convertase P-domain FKM99_03415 PF00990 Diguanylate cyclase, GGDEF domain FKM99_03415 PF00072 Response regulator receiver domain FKM99_03425 PF03222 Tryptophan/tyrosine permease family FKM99_03430 PF00583 Acetyltransferase (GNAT) family FKM99_03435 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FKM99_03435 PF00384 Molybdopterin oxidoreductase FKM99_03435 PF01568 Molydopterin dinucleotide binding domain FKM99_03440 PF10414 Sirohaem synthase dimerisation region FKM99_03440 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FKM99_03440 PF14824 Sirohaem biosynthesis protein central FKM99_03445 PF00591 Glycosyl transferase family, a/b domain FKM99_03445 PF02885 Glycosyl transferase family, helical bundle domain FKM99_03455 PF01738 Dienelactone hydrolase family FKM99_03460 PF03861 ANTAR domain FKM99_03460 PF08376 Nitrate and nitrite sensing FKM99_03470 PF00005 ABC transporter FKM99_03475 PF00528 Binding-protein-dependent transport system inner membrane component FKM99_03480 PF00005 ABC transporter FKM99_03485 PF18267 Rubredoxin NAD+ reductase C-terminal domain FKM99_03485 PF13806 Rieske-like [2Fe-2S] domain FKM99_03485 PF04324 BFD-like [2Fe-2S] binding domain FKM99_03485 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FKM99_03485 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FKM99_03485 PF07992 Pyridine nucleotide-disulphide oxidoreductase FKM99_03500 PF08361 MAATS-type transcriptional repressor, C-terminal region FKM99_03500 PF00440 Bacterial regulatory proteins, tetR family FKM99_03515 PF00211 Adenylate and Guanylate cyclase catalytic domain FKM99_03515 PF00072 Response regulator receiver domain FKM99_03540 PF03793 PASTA domain FKM99_03540 PF00069 Protein kinase domain FKM99_03560 PF13677 Membrane MotB of proton-channel complex MotA/MotB FKM99_03560 PF00691 OmpA family FKM99_03620 PF00004 ATPase family associated with various cellular activities (AAA) FKM99_03620 PF10431 C-terminal, D2-small domain, of ClpB protein FKM99_03620 PF07724 AAA domain (Cdc48 subfamily) FKM99_03620 PF17871 AAA lid domain FKM99_03630 PF04717 Type VI secretion system, phage-baseplate injector FKM99_03630 PF16671 Actin cross-linking domain FKM99_03645 PF00149 Calcineurin-like phosphoesterase FKM99_03645 PF12320 Type 5 capsule protein repressor C-terminal domain FKM99_03650 PF13476 AAA domain FKM99_03655 PF00872 Transposase, Mutator family FKM99_03675 PF08212 Lipocalin-like domain FKM99_03685 PF07690 Major Facilitator Superfamily FKM99_03695 PF03606 C4-dicarboxylate anaerobic carrier FKM99_03705 PF00034 Cytochrome c FKM99_03710 PF01212 Beta-eliminating lyase FKM99_03720 PF07728 AAA domain (dynein-related subfamily) FKM99_03720 PF17868 AAA lid domain FKM99_03720 PF12592 Protein of unknown function (DUF3763) FKM99_03725 PF05762 VWA domain containing CoxE-like protein FKM99_03745 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_03745 PF03466 LysR substrate binding domain FKM99_03750 PF01565 FAD binding domain FKM99_03750 PF09330 D-lactate dehydrogenase, membrane binding FKM99_03770 PF01168 Alanine racemase, N-terminal domain FKM99_03770 PF00842 Alanine racemase, C-terminal domain FKM99_03775 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FKM99_03775 PF00672 HAMP domain FKM99_03790 PF09154 Domain of unknown function (DUF1939) FKM99_03790 PF00128 Alpha amylase, catalytic domain FKM99_03835 PF00563 EAL domain FKM99_03835 PF00990 Diguanylate cyclase, GGDEF domain FKM99_03835 PF03707 Bacterial signalling protein N terminal repeat FKM99_03845 PF00990 Diguanylate cyclase, GGDEF domain FKM99_03845 PF03707 Bacterial signalling protein N terminal repeat FKM99_03845 PF00563 EAL domain FKM99_03855 PF14760 Rnk N-terminus FKM99_03855 PF01272 Transcription elongation factor, GreA/GreB, C-term FKM99_03860 PF07992 Pyridine nucleotide-disulphide oxidoreductase FKM99_03860 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FKM99_03860 PF18267 Rubredoxin NAD+ reductase C-terminal domain FKM99_03860 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FKM99_03860 PF04324 BFD-like [2Fe-2S] binding domain FKM99_03865 PF13806 Rieske-like [2Fe-2S] domain FKM99_03870 PF01226 Formate/nitrite transporter FKM99_03875 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FKM99_03875 PF14824 Sirohaem biosynthesis protein central FKM99_03875 PF10414 Sirohaem synthase dimerisation region FKM99_03890 PF03605 Anaerobic c4-dicarboxylate membrane transporter FKM99_03905 PF07715 TonB-dependent Receptor Plug Domain FKM99_03905 PF00593 TonB dependent receptor FKM99_03920 PF11756 Nitrous oxide-stimulated promoter FKM99_03925 PF01554 MatE FKM99_03935 PF07690 Major Facilitator Superfamily FKM99_03940 PF00085 Thioredoxin FKM99_03945 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FKM99_03945 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FKM99_03965 PF01238 Phosphomannose isomerase type I FKM99_03970 PF07690 Major Facilitator Superfamily FKM99_03975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_03975 PF07730 Histidine kinase FKM99_03975 PF05231 MASE1 FKM99_03980 PF00072 Response regulator receiver domain FKM99_03980 PF00196 Bacterial regulatory proteins, luxR family FKM99_03985 PF07690 Major Facilitator Superfamily FKM99_03990 PF02634 FdhD/NarQ family FKM99_03995 PF03466 LysR substrate binding domain FKM99_03995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_04005 PF00384 Molybdopterin oxidoreductase FKM99_04010 PF07992 Pyridine nucleotide-disulphide oxidoreductase FKM99_04010 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FKM99_04025 PF04143 Sulphur transport FKM99_04035 PF00873 AcrB/AcrD/AcrF family FKM99_04040 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FKM99_04050 PF03477 ATP cone domain FKM99_04050 PF13597 Anaerobic ribonucleoside-triphosphate reductase FKM99_04060 PF01554 MatE FKM99_04070 PF12833 Helix-turn-helix domain FKM99_04075 PF00155 Aminotransferase class I and II FKM99_04080 PF08443 RimK-like ATP-grasp domain FKM99_04080 PF18030 RimK PreATP-grasp domain FKM99_04090 PF04076 Bacterial OB fold (BOF) protein FKM99_04095 PF07685 CobB/CobQ-like glutamine amidotransferase domain FKM99_04105 PF00528 Binding-protein-dependent transport system inner membrane component FKM99_04110 PF03459 TOBE domain FKM99_04110 PF00005 ABC transporter FKM99_04120 PF00360 Phytochrome region FKM99_04120 PF00990 Diguanylate cyclase, GGDEF domain FKM99_04120 PF00563 EAL domain FKM99_04120 PF01590 GAF domain FKM99_04130 PF00990 Diguanylate cyclase, GGDEF domain FKM99_04130 PF00072 Response regulator receiver domain FKM99_04145 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FKM99_04145 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FKM99_04145 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FKM99_04150 PF02233 NAD(P) transhydrogenase beta subunit FKM99_04160 PF00072 Response regulator receiver domain FKM99_04160 PF00486 Transcriptional regulatory protein, C terminal FKM99_04175 PF03701 Uncharacterised protein family (UPF0181) FKM99_04180 PF00582 Universal stress protein family FKM99_04210 PF01253 Translation initiation factor SUI1 FKM99_04220 PF01820 D-ala D-ala ligase N-terminus FKM99_04220 PF07478 D-ala D-ala ligase C-terminus FKM99_04230 PF00583 Acetyltransferase (GNAT) family FKM99_04230 PF13380 CoA binding domain FKM99_04230 PF13607 Succinyl-CoA ligase like flavodoxin domain FKM99_04235 PF03466 LysR substrate binding domain FKM99_04235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_04240 PF07715 TonB-dependent Receptor Plug Domain FKM99_04240 PF00593 TonB dependent receptor FKM99_04250 PF16363 GDP-mannose 4,6 dehydratase FKM99_04255 PF05231 MASE1 FKM99_04255 PF13426 PAS domain FKM99_04255 PF00563 EAL domain FKM99_04255 PF08448 PAS fold FKM99_04255 PF08447 PAS fold FKM99_04255 PF00990 Diguanylate cyclase, GGDEF domain FKM99_04260 PF03746 LamB/YcsF family FKM99_04265 PF02682 Carboxyltransferase domain, subdomain C and D FKM99_04270 PF02626 Carboxyltransferase domain, subdomain A and B FKM99_04285 PF00005 ABC transporter FKM99_04290 PF13472 GDSL-like Lipase/Acylhydrolase family FKM99_04295 PF12241 Trans-2-enoyl-CoA reductase catalytic region FKM99_04295 PF07055 Enoyl reductase FAD binding domain FKM99_04295 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase FKM99_04300 PF13188 PAS domain FKM99_04300 PF03707 Bacterial signalling protein N terminal repeat FKM99_04300 PF00990 Diguanylate cyclase, GGDEF domain FKM99_04300 PF00563 EAL domain FKM99_04310 PF00226 DnaJ domain FKM99_04310 PF01556 DnaJ C terminal domain FKM99_04310 PF00684 DnaJ central domain FKM99_04335 PF12793 Sugar transport-related sRNA regulator N-term FKM99_04335 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FKM99_04345 PF03061 Thioesterase superfamily FKM99_04360 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FKM99_04365 PF12262 Bacterial virulence factor lipase N-terminal FKM99_04380 PF03741 Integral membrane protein TerC family FKM99_04385 PF00149 Calcineurin-like phosphoesterase FKM99_04385 PF02872 5'-nucleotidase, C-terminal domain FKM99_04390 PF11398 Protein of unknown function (DUF2813) FKM99_04395 PF06496 Protein of unknown function (DUF1097) FKM99_04400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_04400 PF03466 LysR substrate binding domain FKM99_04405 PF01226 Formate/nitrite transporter FKM99_04410 PF04264 YceI-like domain FKM99_04415 PF01292 Prokaryotic cytochrome b561 FKM99_04430 PF00563 EAL domain FKM99_04430 PF12792 CSS motif domain associated with EAL FKM99_04435 PF00270 DEAD/DEAH box helicase FKM99_04435 PF00271 Helicase conserved C-terminal domain FKM99_04440 PF04336 Acyl carrier protein phosphodiesterase FKM99_04450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FKM99_04460 PF13419 Haloacid dehalogenase-like hydrolase FKM99_04470 PF11849 Domain of unknown function (DUF3369) FKM99_04490 PF00294 pfkB family carbohydrate kinase FKM99_04495 PF01268 Formate--tetrahydrofolate ligase FKM99_04500 PF00483 Nucleotidyl transferase FKM99_04505 PF06483 Chitinase C FKM99_04505 PF00704 Glycosyl hydrolases family 18 FKM99_04515 PF12833 Helix-turn-helix domain FKM99_04515 PF06719 AraC-type transcriptional regulator N-terminus FKM99_04520 PF00465 Iron-containing alcohol dehydrogenase FKM99_04530 PF00072 Response regulator receiver domain FKM99_04530 PF02954 Bacterial regulatory protein, Fis family FKM99_04530 PF14532 Sigma-54 interaction domain FKM99_04535 PF00672 HAMP domain FKM99_04535 PF00512 His Kinase A (phospho-acceptor) domain FKM99_04535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_04545 PF07690 Major Facilitator Superfamily FKM99_04550 PF00224 Pyruvate kinase, barrel domain FKM99_04550 PF02887 Pyruvate kinase, alpha/beta domain FKM99_04555 PF00005 ABC transporter FKM99_04560 PF00528 Binding-protein-dependent transport system inner membrane component FKM99_04565 PF00497 Bacterial extracellular solute-binding proteins, family 3 FKM99_04570 PF00528 Binding-protein-dependent transport system inner membrane component FKM99_04575 PF01590 GAF domain FKM99_04575 PF00989 PAS fold FKM99_04575 PF00563 EAL domain FKM99_04575 PF00990 Diguanylate cyclase, GGDEF domain FKM99_04595 PF00356 Bacterial regulatory proteins, lacI family FKM99_04595 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FKM99_04600 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FKM99_04600 PF00381 PTS HPr component phosphorylation site FKM99_04605 PF00294 pfkB family carbohydrate kinase FKM99_04610 PF02378 Phosphotransferase system, EIIC FKM99_04610 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FKM99_04620 PF00873 AcrB/AcrD/AcrF family FKM99_04640 PF08669 Glycine cleavage T-protein C-terminal barrel domain FKM99_04640 PF01571 Aminomethyltransferase folate-binding domain FKM99_04650 PF00464 Serine hydroxymethyltransferase FKM99_04655 PF01597 Glycine cleavage H-protein FKM99_04660 PF02347 Glycine cleavage system P-protein FKM99_04665 PF00580 UvrD/REP helicase N-terminal domain FKM99_04665 PF13361 UvrD-like helicase C-terminal domain FKM99_04680 PF08722 TnsA endonuclease N terminal FKM99_04680 PF08721 TnsA endonuclease C terminal FKM99_04720 PF01966 HD domain FKM99_04750 PF00665 Integrase core domain FKM99_04755 PF01695 IstB-like ATP binding protein FKM99_04790 PF17848 Acetyl-coA carboxylase zinc finger domain FKM99_04790 PF01039 Carboxyl transferase domain FKM99_04795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_04795 PF03466 LysR substrate binding domain FKM99_04805 PF00704 Glycosyl hydrolases family 18 FKM99_04805 PF08329 Chitinase A, N-terminal domain FKM99_04810 PF00664 ABC transporter transmembrane region FKM99_04810 PF00005 ABC transporter FKM99_04830 PF02253 Phospholipase A1 FKM99_04845 PF00376 MerR family regulatory protein FKM99_04845 PF09278 MerR, DNA binding FKM99_04850 PF01327 Polypeptide deformylase FKM99_04880 PF01769 Divalent cation transporter FKM99_04880 PF03448 MgtE intracellular N domain FKM99_04880 PF00571 CBS domain FKM99_04900 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FKM99_04905 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FKM99_04915 PF01757 Acyltransferase family FKM99_04930 PF00141 Peroxidase FKM99_04940 PF13187 4Fe-4S dicluster domain FKM99_04940 PF01645 Conserved region in glutamate synthase FKM99_04950 PF12431 Transcriptional regulator FKM99_04950 PF00072 Response regulator receiver domain FKM99_04955 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain FKM99_04955 PF17203 Single cache domain 3 FKM99_04955 PF00989 PAS fold FKM99_04955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_04960 PF00939 Sodium:sulfate symporter transmembrane region FKM99_04965 PF00171 Aldehyde dehydrogenase family FKM99_04985 PF00892 EamA-like transporter family FKM99_04990 PF00893 Small Multidrug Resistance protein FKM99_05005 PF01569 PAP2 superfamily FKM99_05020 PF00892 EamA-like transporter family FKM99_05040 PF00072 Response regulator receiver domain FKM99_05040 PF01584 CheW-like domain FKM99_05065 PF00196 Bacterial regulatory proteins, luxR family FKM99_05065 PF00072 Response regulator receiver domain FKM99_05075 PF00990 Diguanylate cyclase, GGDEF domain FKM99_05080 PF00196 Bacterial regulatory proteins, luxR family FKM99_05080 PF00072 Response regulator receiver domain FKM99_05085 PF00990 Diguanylate cyclase, GGDEF domain FKM99_05085 PF13188 PAS domain FKM99_05085 PF03707 Bacterial signalling protein N terminal repeat FKM99_05085 PF00563 EAL domain FKM99_05090 PF00512 His Kinase A (phospho-acceptor) domain FKM99_05090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_05090 PF09456 RcsC Alpha-Beta-Loop (ABL) FKM99_05090 PF00072 Response regulator receiver domain FKM99_05100 PF03466 LysR substrate binding domain FKM99_05100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_05105 PF03466 LysR substrate binding domain FKM99_05105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_05115 PF00691 OmpA family FKM99_05115 PF05736 OprF membrane domain FKM99_05150 PF00437 Type II/IV secretion system protein FKM99_05165 PF13629 Pilus formation protein N terminal region FKM99_05165 PF00263 Bacterial type II and III secretion system protein FKM99_05165 PF04972 BON domain FKM99_05185 PF03466 LysR substrate binding domain FKM99_05185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_05190 PF12833 Helix-turn-helix domain FKM99_05200 PF04151 Bacterial pre-peptidase C-terminal domain FKM99_05200 PF01752 Collagenase FKM99_05200 PF08453 Peptidase family M9 N-terminal FKM99_05210 PF01926 50S ribosome-binding GTPase FKM99_05215 PF00155 Aminotransferase class I and II FKM99_05220 PF00072 Response regulator receiver domain FKM99_05220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_05230 PF00583 Acetyltransferase (GNAT) family FKM99_05230 PF00814 Glycoprotease family FKM99_05240 PF03606 C4-dicarboxylate anaerobic carrier FKM99_05245 PF04011 LemA family FKM99_05250 PF01435 Peptidase family M48 FKM99_05270 PF08774 VRR-NUC domain FKM99_05270 PF18081 Fanconi anemia-associated nuclease SAP domain FKM99_05280 PF13186 Iron-sulfur cluster-binding domain FKM99_05280 PF04055 Radical SAM superfamily FKM99_05300 PF04076 Bacterial OB fold (BOF) protein FKM99_05305 PF00781 Diacylglycerol kinase catalytic domain FKM99_05310 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_05310 PF03466 LysR substrate binding domain FKM99_05315 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FKM99_05330 PF00092 von Willebrand factor type A domain FKM99_05345 PF07726 ATPase family associated with various cellular activities (AAA) FKM99_05345 PF17863 AAA lid domain FKM99_05350 PF04055 Radical SAM superfamily FKM99_05350 PF13186 Iron-sulfur cluster-binding domain FKM99_05355 PF00884 Sulfatase FKM99_05360 PF03466 LysR substrate binding domain FKM99_05360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_05370 PF00884 Sulfatase FKM99_05375 PF00884 Sulfatase FKM99_05380 PF00486 Transcriptional regulatory protein, C terminal FKM99_05380 PF00072 Response regulator receiver domain FKM99_05395 PF00512 His Kinase A (phospho-acceptor) domain FKM99_05395 PF00672 HAMP domain FKM99_05395 PF00072 Response regulator receiver domain FKM99_05395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_05395 PF01627 Hpt domain FKM99_05400 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FKM99_05405 PF02142 MGS-like domain FKM99_05410 PF00580 UvrD/REP helicase N-terminal domain FKM99_05410 PF12462 DNA helicase IV / RNA helicase N terminal FKM99_05410 PF13361 UvrD-like helicase C-terminal domain FKM99_05415 PF12805 FUSC-like inner membrane protein yccS FKM99_05450 PF07715 TonB-dependent Receptor Plug Domain FKM99_05450 PF00593 TonB dependent receptor FKM99_05465 PF13411 MerR HTH family regulatory protein FKM99_05470 PF00005 ABC transporter FKM99_05475 PF01032 FecCD transport family FKM99_05480 PF01032 FecCD transport family FKM99_05485 PF01497 Periplasmic binding protein FKM99_05495 PF01048 Phosphorylase superfamily FKM99_05500 PF04973 Nicotinamide mononucleotide transporter FKM99_05510 PF00356 Bacterial regulatory proteins, lacI family FKM99_05515 PF00294 pfkB family carbohydrate kinase FKM99_05520 PF13407 Periplasmic binding protein domain FKM99_05525 PF02653 Branched-chain amino acid transport system / permease component FKM99_05530 PF00005 ABC transporter FKM99_05535 PF05025 RbsD / FucU transport protein family FKM99_05540 PF00990 Diguanylate cyclase, GGDEF domain FKM99_05540 PF00563 EAL domain FKM99_05545 PF01048 Phosphorylase superfamily FKM99_05590 PF04116 Fatty acid hydroxylase superfamily FKM99_05605 PF09308 LuxQ, periplasmic FKM99_05605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_05605 PF00512 His Kinase A (phospho-acceptor) domain FKM99_05605 PF00072 Response regulator receiver domain FKM99_05610 PF00034 Cytochrome c FKM99_05610 PF03150 Di-haem cytochrome c peroxidase FKM99_05625 PF00990 Diguanylate cyclase, GGDEF domain FKM99_05625 PF03707 Bacterial signalling protein N terminal repeat FKM99_05625 PF13188 PAS domain FKM99_05625 PF00563 EAL domain FKM99_05635 PF16200 C-terminal region of band_7 FKM99_05635 PF01145 SPFH domain / Band 7 family FKM99_05645 PF00881 Nitroreductase family FKM99_05650 PF00571 CBS domain FKM99_05650 PF00005 ABC transporter FKM99_05655 PF00528 Binding-protein-dependent transport system inner membrane component FKM99_05660 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FKM99_05665 PF00732 GMC oxidoreductase FKM99_05665 PF05199 GMC oxidoreductase FKM99_05670 PF00171 Aldehyde dehydrogenase family FKM99_05675 PF00440 Bacterial regulatory proteins, tetR family FKM99_05675 PF13977 BetI-type transcriptional repressor, C-terminal FKM99_05680 PF17151 Periplasmic sensor domain FKM99_05680 PF00990 Diguanylate cyclase, GGDEF domain FKM99_05695 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FKM99_05695 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FKM99_05705 PF00378 Enoyl-CoA hydratase/isomerase FKM99_05710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FKM99_05710 PF02770 Acyl-CoA dehydrogenase, middle domain FKM99_05710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FKM99_05715 PF00171 Aldehyde dehydrogenase family FKM99_05720 PF02803 Thiolase, C-terminal domain FKM99_05720 PF00108 Thiolase, N-terminal domain FKM99_05725 PF00376 MerR family regulatory protein FKM99_05725 PF09278 MerR, DNA binding FKM99_05730 PF02770 Acyl-CoA dehydrogenase, middle domain FKM99_05730 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FKM99_05730 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FKM99_05735 PF01039 Carboxyl transferase domain FKM99_05740 PF00378 Enoyl-CoA hydratase/isomerase FKM99_05745 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FKM99_05745 PF00364 Biotin-requiring enzyme FKM99_05745 PF00289 Biotin carboxylase, N-terminal domain FKM99_05745 PF02785 Biotin carboxylase C-terminal domain FKM99_05750 PF00682 HMGL-like FKM99_05755 PF01627 Hpt domain FKM99_05755 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FKM99_05755 PF00672 HAMP domain FKM99_05755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_05755 PF00512 His Kinase A (phospho-acceptor) domain FKM99_05755 PF00072 Response regulator receiver domain FKM99_05770 PF12795 Mechanosensitive ion channel porin domain FKM99_05770 PF12794 Mechanosensitive ion channel inner membrane domain 1 FKM99_05770 PF00924 Mechanosensitive ion channel FKM99_05780 PF12464 Maltose acetyltransferase FKM99_05780 PF14602 Hexapeptide repeat of succinyl-transferase FKM99_05785 PF00155 Aminotransferase class I and II FKM99_05785 PF00392 Bacterial regulatory proteins, gntR family FKM99_05790 PF01654 Cytochrome bd terminal oxidase subunit I FKM99_05795 PF02322 Cytochrome bd terminal oxidase subunit II FKM99_05805 PF02567 Phenazine biosynthesis-like protein FKM99_05810 PF02627 Carboxymuconolactone decarboxylase family FKM99_05815 PF13411 MerR HTH family regulatory protein FKM99_05825 PF00034 Cytochrome c FKM99_05835 PF05724 Thiopurine S-methyltransferase (TPMT) FKM99_05840 PF14535 AMP-binding enzyme C-terminal domain FKM99_05840 PF00501 AMP-binding enzyme FKM99_05845 PF00005 ABC transporter FKM99_05870 PF12399 Branched-chain amino acid ATP-binding cassette transporter FKM99_05870 PF00005 ABC transporter FKM99_05885 PF01012 Electron transfer flavoprotein domain FKM99_05890 PF00766 Electron transfer flavoprotein FAD-binding domain FKM99_05890 PF01012 Electron transfer flavoprotein domain FKM99_05895 PF13193 AMP-binding enzyme C-terminal domain FKM99_05895 PF00501 AMP-binding enzyme FKM99_05900 PF00478 IMP dehydrogenase / GMP reductase domain FKM99_05905 PF01256 Carbohydrate kinase FKM99_05905 PF03853 YjeF-related protein N-terminus FKM99_05915 PF00072 Response regulator receiver domain FKM99_05920 PF00248 Aldo/keto reductase family FKM99_05935 PF00654 Voltage gated chloride channel FKM99_05945 PF01566 Natural resistance-associated macrophage protein FKM99_05950 PF01227 GTP cyclohydrolase I FKM99_05955 PF03454 MoeA C-terminal region (domain IV) FKM99_05955 PF00994 Probable molybdopterin binding domain FKM99_05955 PF03453 MoeA N-terminal region (domain I and II) FKM99_05960 PF00899 ThiF family FKM99_05980 PF00581 Rhodanese-like domain FKM99_05985 PF03707 Bacterial signalling protein N terminal repeat FKM99_05985 PF00990 Diguanylate cyclase, GGDEF domain FKM99_05985 PF00563 EAL domain FKM99_05990 PF00704 Glycosyl hydrolases family 18 FKM99_05990 PF08329 Chitinase A, N-terminal domain FKM99_06010 PF00923 Transaldolase/Fructose-6-phosphate aldolase FKM99_06015 PF00456 Transketolase, thiamine diphosphate binding domain FKM99_06015 PF02779 Transketolase, pyrimidine binding domain FKM99_06015 PF02780 Transketolase, C-terminal domain FKM99_06020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FKM99_06020 PF08447 PAS fold FKM99_06030 PF07690 Major Facilitator Superfamily FKM99_06035 PF00793 DAHP synthetase I family FKM99_06045 PF01389 OmpA-like transmembrane domain FKM99_06045 PF00691 OmpA family FKM99_06050 PF13419 Haloacid dehalogenase-like hydrolase FKM99_06055 PF00472 RF-1 domain FKM99_06060 PF12729 Four helix bundle sensory module for signal transduction FKM99_06060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FKM99_06060 PF00672 HAMP domain FKM99_06065 PF00873 AcrB/AcrD/AcrF family FKM99_06070 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FKM99_06075 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FKM99_06080 PF01546 Peptidase family M20/M25/M40 FKM99_06080 PF07687 Peptidase dimerisation domain FKM99_06095 PF00072 Response regulator receiver domain FKM99_06095 PF00196 Bacterial regulatory proteins, luxR family FKM99_06100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_06100 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term FKM99_06100 PF00672 HAMP domain FKM99_06100 PF07730 Histidine kinase FKM99_06105 PF13187 4Fe-4S dicluster domain FKM99_06105 PF12838 4Fe-4S dicluster domain FKM99_06115 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FKM99_06115 PF01568 Molydopterin dinucleotide binding domain FKM99_06115 PF00384 Molybdopterin oxidoreductase FKM99_06120 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) FKM99_06125 PF03264 NapC/NirT cytochrome c family, N-terminal region FKM99_06135 PF00561 alpha/beta hydrolase fold FKM99_06135 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus FKM99_06145 PF02803 Thiolase, C-terminal domain FKM99_06145 PF00108 Thiolase, N-terminal domain FKM99_06150 PF00106 short chain dehydrogenase FKM99_06155 PF01810 LysE type translocator FKM99_06165 PF02355 Protein export membrane protein FKM99_06165 PF07549 SecD/SecF GG Motif FKM99_06170 PF07549 SecD/SecF GG Motif FKM99_06170 PF13721 SecD export protein N-terminal TM region FKM99_06170 PF02355 Protein export membrane protein FKM99_06200 PF01037 Lrp/AsnC ligand binding domain FKM99_06220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FKM99_06220 PF00529 HlyD membrane-fusion protein of T1SS FKM99_06230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_06230 PF00512 His Kinase A (phospho-acceptor) domain FKM99_06230 PF09308 LuxQ, periplasmic FKM99_06230 PF00072 Response regulator receiver domain FKM99_06235 PF13407 Periplasmic binding protein domain FKM99_06240 PF01541 GIY-YIG catalytic domain FKM99_06245 PF04337 Protein of unknown function, DUF480 FKM99_06260 PF04363 Protein of unknown function (DUF496) FKM99_06265 PF01554 MatE FKM99_06270 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FKM99_06275 PF01627 Hpt domain FKM99_06275 PF00072 Response regulator receiver domain FKM99_06275 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FKM99_06275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_06275 PF00512 His Kinase A (phospho-acceptor) domain FKM99_06275 PF00672 HAMP domain FKM99_06280 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FKM99_06280 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FKM99_06300 PF03466 LysR substrate binding domain FKM99_06300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_06305 PF01037 Lrp/AsnC ligand binding domain FKM99_06305 PF13404 AsnC-type helix-turn-helix domain FKM99_06315 PF13520 Amino acid permease FKM99_06320 PF00155 Aminotransferase class I and II FKM99_06320 PF00392 Bacterial regulatory proteins, gntR family FKM99_06330 PF03109 ABC1 family FKM99_06335 PF00571 CBS domain FKM99_06335 PF03448 MgtE intracellular N domain FKM99_06335 PF01769 Divalent cation transporter FKM99_06345 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FKM99_06350 PF07969 Amidohydrolase family FKM99_06360 PF01966 HD domain FKM99_06375 PF07690 Major Facilitator Superfamily FKM99_06385 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FKM99_06390 PF00255 Glutathione peroxidase FKM99_06405 PF01323 DSBA-like thioredoxin domain FKM99_06425 PF00106 short chain dehydrogenase FKM99_06430 PF00486 Transcriptional regulatory protein, C terminal FKM99_06430 PF00072 Response regulator receiver domain FKM99_06435 PF00672 HAMP domain FKM99_06435 PF00512 His Kinase A (phospho-acceptor) domain FKM99_06435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_06445 PF01219 Prokaryotic diacylglycerol kinase FKM99_06450 PF08019 Phosphoethanolamine transferase EptA/EptB FKM99_06450 PF00884 Sulfatase FKM99_06455 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FKM99_06480 PF01047 MarR family FKM99_06490 PF01734 Patatin-like phospholipase FKM99_06495 PF02678 Pirin FKM99_06495 PF05726 Pirin C-terminal cupin domain FKM99_06500 PF00313 'Cold-shock' DNA-binding domain FKM99_06520 PF00962 Adenosine/AMP deaminase FKM99_06525 PF00462 Glutaredoxin FKM99_06525 PF08534 Redoxin FKM99_06540 PF00768 D-alanyl-D-alanine carboxypeptidase FKM99_06540 PF07943 Penicillin-binding protein 5, C-terminal domain FKM99_06555 PF02798 Glutathione S-transferase, N-terminal domain FKM99_06560 PF00440 Bacterial regulatory proteins, tetR family FKM99_06560 PF02909 Tetracyclin repressor-like, C-terminal domain FKM99_06565 PF01872 RibD C-terminal domain FKM99_06625 PF01497 Periplasmic binding protein FKM99_06625 PF12833 Helix-turn-helix domain FKM99_06630 PF00155 Aminotransferase class I and II FKM99_06660 PF00271 Helicase conserved C-terminal domain FKM99_06660 PF00270 DEAD/DEAH box helicase FKM99_06670 PF03466 LysR substrate binding domain FKM99_06670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_06675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_06675 PF03466 LysR substrate binding domain FKM99_06685 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FKM99_06705 PF12833 Helix-turn-helix domain FKM99_06705 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term FKM99_06715 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) FKM99_06730 PF03466 LysR substrate binding domain FKM99_06730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_06740 PF17763 Glutaminase/Asparaginase C-terminal domain FKM99_06740 PF00710 Asparaginase, N-terminal FKM99_06745 PF03618 Kinase/pyrophosphorylase FKM99_06750 PF00391 PEP-utilising enzyme, mobile domain FKM99_06750 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FKM99_06750 PF02896 PEP-utilising enzyme, TIM barrel domain FKM99_06770 PF00579 tRNA synthetases class I (W and Y) FKM99_06775 PF13416 Bacterial extracellular solute-binding protein FKM99_06785 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_06785 PF03466 LysR substrate binding domain FKM99_06790 PF13533 Biotin-lipoyl like FKM99_06795 PF00873 AcrB/AcrD/AcrF family FKM99_06810 PF07694 5TMR of 5TMR-LYT FKM99_06810 PF00990 Diguanylate cyclase, GGDEF domain FKM99_06820 PF00196 Bacterial regulatory proteins, luxR family FKM99_06825 PF02837 Glycosyl hydrolases family 2, sugar binding domain FKM99_06825 PF00703 Glycosyl hydrolases family 2 FKM99_06825 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FKM99_06825 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 FKM99_06830 PF02028 BCCT, betaine/carnitine/choline family transporter FKM99_06835 PF00392 Bacterial regulatory proteins, gntR family FKM99_06835 PF07702 UTRA domain FKM99_06860 PF00005 ABC transporter FKM99_06860 PF08402 TOBE domain FKM99_06900 PF00873 AcrB/AcrD/AcrF family FKM99_06905 PF13533 Biotin-lipoyl like FKM99_06915 PF13091 PLD-like domain FKM99_06945 PF09278 MerR, DNA binding FKM99_06945 PF00376 MerR family regulatory protein FKM99_06960 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_06960 PF03466 LysR substrate binding domain FKM99_06970 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FKM99_06970 PF13378 Enolase C-terminal domain-like FKM99_06980 PF00679 Elongation factor G C-terminus FKM99_06980 PF03144 Elongation factor Tu domain 2 FKM99_06980 PF14492 Elongation Factor G, domain II FKM99_06980 PF00009 Elongation factor Tu GTP binding domain FKM99_06980 PF03764 Elongation factor G, domain IV FKM99_07005 PF02001 Protein of unknown function DUF134 FKM99_07015 PF04170 NlpE N-terminal domain FKM99_07015 PF17185 NlpE C-terminal OB domain FKM99_07025 PF06629 MltA-interacting protein MipA FKM99_07035 PF01389 OmpA-like transmembrane domain FKM99_07035 PF00691 OmpA family FKM99_07040 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_07040 PF03466 LysR substrate binding domain FKM99_07070 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FKM99_07070 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FKM99_07080 PF00857 Isochorismatase family FKM99_07090 PF06628 Catalase-related immune-responsive FKM99_07090 PF00199 Catalase FKM99_07100 PF08220 DeoR-like helix-turn-helix domain FKM99_07100 PF00455 DeoR C terminal sensor domain FKM99_07105 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FKM99_07110 PF01625 Peptide methionine sulfoxide reductase FKM99_07110 PF01641 SelR domain FKM99_07130 PF17678 Glycosyl hydrolase family 92 N-terminal domain FKM99_07130 PF07971 Glycosyl hydrolase family 92 FKM99_07135 PF07971 Glycosyl hydrolase family 92 FKM99_07135 PF17678 Glycosyl hydrolase family 92 N-terminal domain FKM99_07145 PF17678 Glycosyl hydrolase family 92 N-terminal domain FKM99_07145 PF07971 Glycosyl hydrolase family 92 FKM99_07150 PF03060 Nitronate monooxygenase FKM99_07155 PF00149 Calcineurin-like phosphoesterase FKM99_07155 PF02872 5'-nucleotidase, C-terminal domain FKM99_07165 PF00440 Bacterial regulatory proteins, tetR family FKM99_07165 PF08359 YsiA-like protein, C-terminal region FKM99_07180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_07180 PF03466 LysR substrate binding domain FKM99_07185 PF01810 LysE type translocator FKM99_07200 PF00118 TCP-1/cpn60 chaperonin family FKM99_07205 PF00166 Chaperonin 10 Kd subunit FKM99_07215 PF00581 Rhodanese-like domain FKM99_07245 PF01070 FMN-dependent dehydrogenase FKM99_07265 PF00669 Bacterial flagellin N-terminal helical region FKM99_07270 PF00460 Flagella basal body rod protein FKM99_07270 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FKM99_07275 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FKM99_07275 PF10135 Rod binding protein FKM99_07280 PF02119 Flagellar P-ring protein FKM99_07285 PF02107 Flagellar L-ring protein FKM99_07290 PF00460 Flagella basal body rod protein FKM99_07290 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FKM99_07295 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FKM99_07295 PF00460 Flagella basal body rod protein FKM99_07300 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FKM99_07300 PF00460 Flagella basal body rod protein FKM99_07300 PF07559 Flagellar basal body protein FlaE FKM99_07305 PF13860 FlgD Ig-like domain FKM99_07305 PF13861 FlgD Tudor-like domain FKM99_07305 PF03963 Flagellar hook capping protein - N-terminal region FKM99_07310 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FKM99_07310 PF00460 Flagella basal body rod protein FKM99_07315 PF00460 Flagella basal body rod protein FKM99_07335 PF01464 Transglycosylase SLT domain FKM99_07340 PF08264 Anticodon-binding domain of tRNA FKM99_07340 PF00133 tRNA synthetases class I (I, L, M and V) FKM99_07360 PF03315 Serine dehydratase beta chain FKM99_07360 PF03313 Serine dehydratase alpha chain FKM99_07365 PF00854 POT family FKM99_07375 PF03466 LysR substrate binding domain FKM99_07375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_07385 PF03466 LysR substrate binding domain FKM99_07385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_07390 PF01389 OmpA-like transmembrane domain FKM99_07390 PF00691 OmpA family FKM99_07400 PF00246 Zinc carboxypeptidase FKM99_07400 PF18027 Cytosolic carboxypeptidase N-terminal domain FKM99_07405 PF01266 FAD dependent oxidoreductase FKM99_07415 PF04393 Protein of unknown function (DUF535) FKM99_07430 PF00392 Bacterial regulatory proteins, gntR family FKM99_07430 PF07702 UTRA domain FKM99_07435 PF00528 Binding-protein-dependent transport system inner membrane component FKM99_07440 PF00005 ABC transporter FKM99_07455 PF00266 Aminotransferase class-V FKM99_07465 PF13419 Haloacid dehalogenase-like hydrolase FKM99_07470 PF00356 Bacterial regulatory proteins, lacI family FKM99_07475 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FKM99_07485 PF03611 PTS system sugar-specific permease component FKM99_07500 PF00657 GDSL-like Lipase/Acylhydrolase FKM99_07505 PF02321 Outer membrane efflux protein FKM99_07510 PF12704 MacB-like periplasmic core domain FKM99_07510 PF00005 ABC transporter FKM99_07510 PF02687 FtsX-like permease family FKM99_07515 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FKM99_07520 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FKM99_07525 PF00194 Eukaryotic-type carbonic anhydrase FKM99_07530 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) FKM99_07545 PF13419 Haloacid dehalogenase-like hydrolase FKM99_07550 PF03466 LysR substrate binding domain FKM99_07550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_07585 PF14602 Hexapeptide repeat of succinyl-transferase FKM99_07585 PF12464 Maltose acetyltransferase FKM99_07590 PF02566 OsmC-like protein FKM99_07600 PF02566 OsmC-like protein FKM99_07605 PF01641 SelR domain FKM99_07605 PF01625 Peptide methionine sulfoxide reductase FKM99_07620 PF04244 Deoxyribodipyrimidine photo-lyase-related protein FKM99_07630 PF00990 Diguanylate cyclase, GGDEF domain FKM99_07645 PF12729 Four helix bundle sensory module for signal transduction FKM99_07645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FKM99_07645 PF00672 HAMP domain FKM99_07650 PF05230 MASE2 domain FKM99_07650 PF00990 Diguanylate cyclase, GGDEF domain FKM99_07655 PF13532 2OG-Fe(II) oxygenase superfamily FKM99_07665 PF07670 Nucleoside recognition FKM99_07665 PF07662 Na+ dependent nucleoside transporter C-terminus FKM99_07665 PF01773 Na+ dependent nucleoside transporter N-terminus FKM99_07685 PF01212 Beta-eliminating lyase FKM99_07695 PF01266 FAD dependent oxidoreductase FKM99_07720 PF05525 Branched-chain amino acid transport protein FKM99_07725 PF00990 Diguanylate cyclase, GGDEF domain FKM99_07725 PF05230 MASE2 domain FKM99_07730 PF00072 Response regulator receiver domain FKM99_07730 PF02954 Bacterial regulatory protein, Fis family FKM99_07730 PF00158 Sigma-54 interaction domain FKM99_07735 PF00512 His Kinase A (phospho-acceptor) domain FKM99_07735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_07735 PF02743 Cache domain FKM99_07745 PF00232 Glycosyl hydrolase family 1 FKM99_07770 PF03466 LysR substrate binding domain FKM99_07770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_07780 PF18030 RimK PreATP-grasp domain FKM99_07780 PF08443 RimK-like ATP-grasp domain FKM99_07785 PF18030 RimK PreATP-grasp domain FKM99_07785 PF08443 RimK-like ATP-grasp domain FKM99_07790 PF00753 Metallo-beta-lactamase superfamily FKM99_07795 PF17944 Arginine decarboxylase C-terminal helical extension FKM99_07795 PF17810 Arginine decarboxylase helical bundle domain FKM99_07795 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FKM99_07800 PF00491 Arginase family FKM99_07805 PF07690 Major Facilitator Superfamily FKM99_07810 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FKM99_07810 PF00326 Prolyl oligopeptidase family FKM99_07825 PF00950 ABC 3 transport family FKM99_07830 PF00005 ABC transporter FKM99_07835 PF01297 Zinc-uptake complex component A periplasmic FKM99_07875 PF02472 Biopolymer transport protein ExbD/TolR FKM99_07880 PF01618 MotA/TolQ/ExbB proton channel family FKM99_07885 PF01618 MotA/TolQ/ExbB proton channel family FKM99_07895 PF07715 TonB-dependent Receptor Plug Domain FKM99_07895 PF00593 TonB dependent receptor FKM99_07900 PF00672 HAMP domain FKM99_07900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_07900 PF16750 Sensor domain of 2-component histidine kinase FKM99_07900 PF00512 His Kinase A (phospho-acceptor) domain FKM99_07905 PF00072 Response regulator receiver domain FKM99_07905 PF00486 Transcriptional regulatory protein, C terminal FKM99_07915 PF03009 Glycerophosphoryl diester phosphodiesterase family FKM99_07925 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FKM99_07925 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FKM99_07930 PF10928 Protein of unknown function (DUF2810) FKM99_07985 PF04013 Putative SAM-dependent RNA methyltransferase FKM99_07990 PF01523 Putative modulator of DNA gyrase FKM99_07995 PF01523 Putative modulator of DNA gyrase FKM99_08005 PF08543 Phosphomethylpyrimidine kinase FKM99_08010 PF00005 ABC transporter FKM99_08015 PF00528 Binding-protein-dependent transport system inner membrane component FKM99_08020 PF09084 NMT1/THI5 like FKM99_08025 PF03070 TENA/THI-4/PQQC family FKM99_08030 PF02110 Hydroxyethylthiazole kinase family FKM99_08035 PF02581 Thiamine monophosphate synthase FKM99_08045 PF01568 Molydopterin dinucleotide binding domain FKM99_08045 PF18364 Molybdopterin oxidoreductase N-terminal domain FKM99_08045 PF00384 Molybdopterin oxidoreductase FKM99_08050 PF03264 NapC/NirT cytochrome c family, N-terminal region FKM99_08075 PF00583 Acetyltransferase (GNAT) family FKM99_08095 PF00392 Bacterial regulatory proteins, gntR family FKM99_08095 PF00155 Aminotransferase class I and II FKM99_08100 PF02595 Glycerate kinase family FKM99_08105 PF02447 GntP family permease FKM99_08110 PF13556 PucR C-terminal helix-turn-helix domain FKM99_08110 PF05651 Putative sugar diacid recognition FKM99_08110 PF17853 GGDEF-like domain FKM99_08135 PF13419 Haloacid dehalogenase-like hydrolase FKM99_08150 PF03466 LysR substrate binding domain FKM99_08150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_08160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_08160 PF03466 LysR substrate binding domain FKM99_08165 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FKM99_08170 PF01661 Macro domain FKM99_08175 PF01204 Trehalase FKM99_08185 PF12706 Beta-lactamase superfamily domain FKM99_08195 PF07690 Major Facilitator Superfamily FKM99_08200 PF13533 Biotin-lipoyl like FKM99_08205 PF03922 OmpW family FKM99_08210 PF13599 Pentapeptide repeats (9 copies) FKM99_08225 PF18416 N-acetylglucosamine binding protein domain 2 FKM99_08225 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading FKM99_08230 PF01037 Lrp/AsnC ligand binding domain FKM99_08235 PF01810 LysE type translocator FKM99_08240 PF04954 Siderophore-interacting protein FKM99_08240 PF08021 Siderophore-interacting FAD-binding domain FKM99_08245 PF14583 Oligogalacturonate lyase FKM99_08250 PF00474 Sodium:solute symporter family FKM99_08255 PF13229 Right handed beta helix region FKM99_08270 PF01081 KDPG and KHG aldolase FKM99_08275 PF00294 pfkB family carbohydrate kinase FKM99_08290 PF07883 Cupin domain FKM99_08295 PF10688 Bacterial inner membrane protein FKM99_08305 PF09339 IclR helix-turn-helix domain FKM99_08305 PF01614 Bacterial transcriptional regulator FKM99_08320 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_08320 PF03466 LysR substrate binding domain FKM99_08325 PF00797 N-acetyltransferase FKM99_08330 PF08240 Alcohol dehydrogenase GroES-like domain FKM99_08330 PF00107 Zinc-binding dehydrogenase FKM99_08335 PF00756 Putative esterase FKM99_08345 PF17152 Periplasmic sensor domain FKM99_08345 PF00990 Diguanylate cyclase, GGDEF domain FKM99_08360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_08360 PF03466 LysR substrate binding domain FKM99_08375 PF00849 RNA pseudouridylate synthase FKM99_08380 PF01554 MatE FKM99_08390 PF00990 Diguanylate cyclase, GGDEF domain FKM99_08390 PF00563 EAL domain FKM99_08400 PF06865 Pyrimidine/purine nucleoside phosphorylase FKM99_08410 PF00704 Glycosyl hydrolases family 18 FKM99_08410 PF08329 Chitinase A, N-terminal domain FKM99_08430 PF03600 Citrate transporter FKM99_08440 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 FKM99_08450 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FKM99_08450 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FKM99_08455 PF06029 AlkA N-terminal domain FKM99_08455 PF00730 HhH-GPD superfamily base excision DNA repair protein FKM99_08470 PF07681 DoxX FKM99_08475 PF02678 Pirin FKM99_08475 PF17954 Quercetinase C-terminal cupin domain FKM99_08480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_08480 PF03466 LysR substrate binding domain FKM99_08495 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FKM99_08510 PF03616 Sodium/glutamate symporter FKM99_08515 PF00392 Bacterial regulatory proteins, gntR family FKM99_08515 PF00155 Aminotransferase class I and II FKM99_08520 PF00005 ABC transporter FKM99_08530 PF03616 Sodium/glutamate symporter FKM99_08545 PF00132 Bacterial transferase hexapeptide (six repeats) FKM99_08560 PF00672 HAMP domain FKM99_08560 PF17200 Single Cache domain 2 FKM99_08560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FKM99_08565 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FKM99_08575 PF04397 LytTr DNA-binding domain FKM99_08575 PF00072 Response regulator receiver domain FKM99_08580 PF13492 GAF domain FKM99_08580 PF06580 Histidine kinase FKM99_08580 PF07694 5TMR of 5TMR-LYT FKM99_08580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_08600 PF00005 ABC transporter FKM99_08615 PF01098 Cell cycle protein FKM99_08620 PF01709 Transcriptional regulator FKM99_08630 PF00072 Response regulator receiver domain FKM99_08630 PF00512 His Kinase A (phospho-acceptor) domain FKM99_08630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_08630 PF01627 Hpt domain FKM99_08630 PF00672 HAMP domain FKM99_08630 PF17149 Periplasmic sensor domain found in signal transduction proteins FKM99_08645 PF00925 GTP cyclohydrolase II FKM99_08645 PF08719 Domain of unknown function (DUF1768) FKM99_08650 PF13542 Helix-turn-helix domain of transposase family ISL3 FKM99_08650 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 FKM99_08650 PF01610 Transposase FKM99_08655 PF11638 DnaA N-terminal domain FKM99_08655 PF00308 Bacterial dnaA protein FKM99_08655 PF08299 Bacterial dnaA protein helix-turn-helix FKM99_08660 PF02768 DNA polymerase III beta subunit, C-terminal domain FKM99_08660 PF02767 DNA polymerase III beta subunit, central domain FKM99_08660 PF00712 DNA polymerase III beta subunit, N-terminal domain FKM99_08665 PF02463 RecF/RecN/SMC N terminal domain FKM99_08670 PF01751 Toprim domain FKM99_08670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_08670 PF00204 DNA gyrase B FKM99_08670 PF00986 DNA gyrase B subunit, carboxyl terminus FKM99_08670 PF18053 DNA gyrase B subunit insert domain FKM99_08690 PF00011 Hsp20/alpha crystallin family FKM99_08695 PF00155 Aminotransferase class I and II FKM99_08700 PF00128 Alpha amylase, catalytic domain FKM99_08705 PF02092 Glycyl-tRNA synthetase beta subunit FKM99_08705 PF05746 DALR anticodon binding domain FKM99_08710 PF02091 Glycyl-tRNA synthetase alpha subunit FKM99_08715 PF01169 Uncharacterized protein family UPF0016 FKM99_08725 PF01206 Sulfurtransferase TusA FKM99_08735 PF03466 LysR substrate binding domain FKM99_08735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_08740 PF08240 Alcohol dehydrogenase GroES-like domain FKM99_08740 PF00107 Zinc-binding dehydrogenase FKM99_08745 PF02803 Thiolase, C-terminal domain FKM99_08745 PF00108 Thiolase, N-terminal domain FKM99_08750 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FKM99_08750 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FKM99_08750 PF00378 Enoyl-CoA hydratase/isomerase FKM99_08755 PF09186 Domain of unknown function (DUF1949) FKM99_08755 PF01205 Uncharacterized protein family UPF0029 FKM99_08760 PF02386 Cation transport protein FKM99_08765 PF12724 Flavodoxin domain FKM99_08805 PF03466 LysR substrate binding domain FKM99_08805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_08810 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FKM99_08810 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FKM99_08815 PF04380 Membrane fusogenic activity FKM99_08825 PF00873 AcrB/AcrD/AcrF family FKM99_08830 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FKM99_08835 PF00440 Bacterial regulatory proteins, tetR family FKM99_08835 PF16295 Tetracyclin repressor-like, C-terminal domain FKM99_08840 PF13361 UvrD-like helicase C-terminal domain FKM99_08840 PF00580 UvrD/REP helicase N-terminal domain FKM99_08845 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FKM99_08870 PF13419 Haloacid dehalogenase-like hydrolase FKM99_08885 PF00005 ABC transporter FKM99_08885 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FKM99_08890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FKM99_08900 PF00528 Binding-protein-dependent transport system inner membrane component FKM99_08900 PF12911 N-terminal TM domain of oligopeptide transport permease C FKM99_08935 PF00069 Protein kinase domain FKM99_08940 PF00356 Bacterial regulatory proteins, lacI family FKM99_08940 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FKM99_08945 PF03466 LysR substrate binding domain FKM99_08945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_08950 PF00893 Small Multidrug Resistance protein FKM99_08955 PF00893 Small Multidrug Resistance protein FKM99_08960 PF00920 Dehydratase family FKM99_08965 PF01202 Shikimate kinase FKM99_08970 PF02447 GntP family permease FKM99_08975 PF01081 KDPG and KHG aldolase FKM99_08980 PF01048 Phosphorylase superfamily FKM99_08985 PF03466 LysR substrate binding domain FKM99_08985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_08990 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FKM99_08990 PF07992 Pyridine nucleotide-disulphide oxidoreductase FKM99_08995 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FKM99_09005 PF01432 Peptidase family M3 FKM99_09010 PF01037 Lrp/AsnC ligand binding domain FKM99_09015 PF00563 EAL domain FKM99_09015 PF00990 Diguanylate cyclase, GGDEF domain FKM99_09015 PF08448 PAS fold FKM99_09020 PF04445 Putative SAM-dependent methyltransferase FKM99_09030 PF00892 EamA-like transporter family FKM99_09035 PF00582 Universal stress protein family FKM99_09040 PF00210 Ferritin-like domain FKM99_09045 PF10625 Universal stress protein B (UspB) FKM99_09055 PF08721 TnsA endonuclease C terminal FKM99_09055 PF08722 TnsA endonuclease N terminal FKM99_09060 PF00665 Integrase core domain FKM99_09065 PF13401 AAA domain FKM99_09065 PF11426 Tn7 transposition regulator TnsC FKM99_09080 PF12161 HsdM N-terminal domain FKM99_09080 PF02384 N-6 DNA Methylase FKM99_09085 PF02384 N-6 DNA Methylase FKM99_09090 PF01420 Type I restriction modification DNA specificity domain FKM99_09095 PF11867 Domain of unknown function (DUF3387) FKM99_09095 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) FKM99_09095 PF18766 SWI2/SNF2 ATPase FKM99_09105 PF02954 Bacterial regulatory protein, Fis family FKM99_09105 PF01590 GAF domain FKM99_09105 PF00158 Sigma-54 interaction domain FKM99_09110 PF04972 BON domain FKM99_09160 PF01594 AI-2E family transporter FKM99_09165 PF00563 EAL domain FKM99_09165 PF03707 Bacterial signalling protein N terminal repeat FKM99_09165 PF00990 Diguanylate cyclase, GGDEF domain FKM99_09175 PF02646 RmuC family FKM99_09180 PF01209 ubiE/COQ5 methyltransferase family FKM99_09185 PF02036 SCP-2 sterol transfer family FKM99_09190 PF03109 ABC1 family FKM99_09195 PF02416 mttA/Hcf106 family FKM99_09200 PF02416 mttA/Hcf106 family FKM99_09205 PF00902 Sec-independent protein translocase protein (TatC) FKM99_09215 PF01026 TatD related DNase FKM99_09225 PF00490 Delta-aminolevulinic acid dehydratase FKM99_09240 PF00476 DNA polymerase family A FKM99_09240 PF01612 3'-5' exonuclease FKM99_09240 PF01367 5'-3' exonuclease, C-terminal SAM fold FKM99_09240 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FKM99_09250 PF01926 50S ribosome-binding GTPase FKM99_09255 PF00034 Cytochrome c FKM99_09275 PF04220 Der GTPase activator (YihI) FKM99_09280 PF10675 Protein of unknown function (DUF2489) FKM99_09285 PF04055 Radical SAM superfamily FKM99_09285 PF06969 HemN C-terminal domain FKM99_09290 PF00962 Adenosine/AMP deaminase FKM99_09295 PF00563 EAL domain FKM99_09295 PF00990 Diguanylate cyclase, GGDEF domain FKM99_09295 PF03707 Bacterial signalling protein N terminal repeat FKM99_09300 PF00072 Response regulator receiver domain FKM99_09300 PF02954 Bacterial regulatory protein, Fis family FKM99_09300 PF00158 Sigma-54 interaction domain FKM99_09305 PF00512 His Kinase A (phospho-acceptor) domain FKM99_09305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_09305 PF00989 PAS fold FKM99_09315 PF00120 Glutamine synthetase, catalytic domain FKM99_09315 PF03951 Glutamine synthetase, beta-Grasp domain FKM99_09335 PF03631 Virulence factor BrkB FKM99_09340 PF02580 D-Tyr-tRNA(Tyr) deacylase FKM99_09345 PF09500 Putative thioesterase (yiiD_Cterm) FKM99_09345 PF00583 Acetyltransferase (GNAT) family FKM99_09355 PF01293 Phosphoenolpyruvate carboxykinase FKM99_09360 PF01430 Hsp33 protein FKM99_09365 PF01479 S4 domain FKM99_09370 PF11356 Type II secretion system protein C FKM99_09375 PF00263 Bacterial type II and III secretion system protein FKM99_09375 PF03958 Bacterial type II/III secretion system short domain FKM99_09380 PF00437 Type II/IV secretion system protein FKM99_09385 PF00482 Type II secretion system (T2SS), protein F FKM99_09390 PF07963 Prokaryotic N-terminal methylation motif FKM99_09390 PF08334 Type II secretion system (T2SS), protein G FKM99_09395 PF12019 Type II transport protein GspH FKM99_09400 PF07963 Prokaryotic N-terminal methylation motif FKM99_09400 PF02501 Type II secretion system (T2SS), protein I FKM99_09405 PF07963 Prokaryotic N-terminal methylation motif FKM99_09405 PF11612 Type II secretion system (T2SS), protein J FKM99_09410 PF03934 Type II secretion system (T2SS), protein K FKM99_09415 PF05134 Type II secretion system (T2SS), protein L FKM99_09415 PF12693 GspL periplasmic domain FKM99_09420 PF04612 Type II secretion system (T2SS), protein M FKM99_09425 PF01203 Type II secretion system (T2SS), protein N FKM99_09430 PF00459 Inositol monophosphatase family FKM99_09435 PF00293 NUDIX domain FKM99_09440 PF01521 Iron-sulphur cluster biosynthesis FKM99_09440 PF01106 NifU-like domain FKM99_09445 PF00156 Phosphoribosyl transferase domain FKM99_09450 PF00561 alpha/beta hydrolase fold FKM99_09460 PF16921 Tex protein YqgF-like domain FKM99_09460 PF09371 Tex-like protein N-terminal domain FKM99_09460 PF00575 S1 RNA binding domain FKM99_09460 PF17674 HHH domain FKM99_09470 PF03449 Transcription elongation factor, N-terminal FKM99_09470 PF01272 Transcription elongation factor, GreA/GreB, C-term FKM99_09480 PF00486 Transcriptional regulatory protein, C terminal FKM99_09480 PF00072 Response regulator receiver domain FKM99_09485 PF00672 HAMP domain FKM99_09485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_09485 PF00512 His Kinase A (phospho-acceptor) domain FKM99_09490 PF00860 Permease family FKM99_09500 PF17191 RecG wedge domain FKM99_09500 PF00271 Helicase conserved C-terminal domain FKM99_09500 PF00270 DEAD/DEAH box helicase FKM99_09505 PF12105 SpoU, rRNA methylase, C-terminal FKM99_09505 PF00588 SpoU rRNA Methylase family FKM99_09510 PF13291 ACT domain FKM99_09510 PF04607 Region found in RelA / SpoT proteins FKM99_09510 PF02824 TGS domain FKM99_09515 PF01192 RNA polymerase Rpb6 FKM99_09520 PF00625 Guanylate kinase FKM99_09535 PF02472 Biopolymer transport protein ExbD/TolR FKM99_09540 PF01618 MotA/TolQ/ExbB proton channel family FKM99_09555 PF07715 TonB-dependent Receptor Plug Domain FKM99_09555 PF00593 TonB dependent receptor FKM99_09565 PF00528 Binding-protein-dependent transport system inner membrane component FKM99_09570 PF12911 N-terminal TM domain of oligopeptide transport permease C FKM99_09570 PF00528 Binding-protein-dependent transport system inner membrane component FKM99_09575 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FKM99_09580 PF00005 ABC transporter FKM99_09580 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FKM99_09585 PF00005 ABC transporter FKM99_09585 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FKM99_09595 PF03755 YicC-like family, N-terminal region FKM99_09595 PF08340 Domain of unknown function (DUF1732) FKM99_09600 PF01138 3' exoribonuclease family, domain 1 FKM99_09600 PF03725 3' exoribonuclease family, domain 2 FKM99_09605 PF00156 Phosphoribosyl transferase domain FKM99_09610 PF03279 Bacterial lipid A biosynthesis acyltransferase FKM99_09615 PF00440 Bacterial regulatory proteins, tetR family FKM99_09620 PF04127 DNA / pantothenate metabolism flavoprotein FKM99_09620 PF02441 Flavoprotein FKM99_09630 PF00672 HAMP domain FKM99_09630 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FKM99_09630 PF17200 Single Cache domain 2 FKM99_09635 PF04002 RadC-like JAB domain FKM99_09640 PF00830 Ribosomal L28 family FKM99_09645 PF00471 Ribosomal protein L33 FKM99_09655 PF06827 Zinc finger found in FPG and IleRS FKM99_09655 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FKM99_09655 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FKM99_09660 PF01467 Cytidylyltransferase-like FKM99_09665 PF05686 Glycosyl transferase family 90 FKM99_09670 PF00535 Glycosyl transferase family 2 FKM99_09675 PF00535 Glycosyl transferase family 2 FKM99_09680 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FKM99_09685 PF01219 Prokaryotic diacylglycerol kinase FKM99_09695 PF16363 GDP-mannose 4,6 dehydratase FKM99_09700 PF00483 Nucleotidyl transferase FKM99_09705 PF05523 WxcM-like, C-terminal FKM99_09715 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FKM99_09740 PF00682 HMGL-like FKM99_09740 PF07836 DmpG-like communication domain FKM99_09745 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FKM99_09750 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FKM99_09760 PF03279 Bacterial lipid A biosynthesis acyltransferase FKM99_09765 PF01370 NAD dependent epimerase/dehydratase family FKM99_09770 PF06082 Exopolysaccharide biosynthesis protein YbjH FKM99_09795 PF10531 SLBB domain FKM99_09795 PF02563 Polysaccharide biosynthesis/export protein FKM99_09795 PF18412 Outer-membrane lipoprotein Wza C-terminal domain FKM99_09805 PF01467 Cytidylyltransferase-like FKM99_09815 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase FKM99_09820 PF13439 Glycosyltransferase Family 4 FKM99_09820 PF00534 Glycosyl transferases group 1 FKM99_09835 PF00535 Glycosyl transferase family 2 FKM99_09840 PF02397 Bacterial sugar transferase FKM99_09845 PF00753 Metallo-beta-lactamase superfamily FKM99_09845 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FKM99_09845 PF10996 Beta-Casp domain FKM99_09850 PF00953 Glycosyl transferase family 4 FKM99_09855 PF01370 NAD dependent epimerase/dehydratase family FKM99_09860 PF01943 Polysaccharide biosynthesis protein FKM99_09870 PF00535 Glycosyl transferase family 2 FKM99_09885 PF00534 Glycosyl transferases group 1 FKM99_09900 PF00534 Glycosyl transferases group 1 FKM99_09900 PF13439 Glycosyltransferase Family 4 FKM99_09910 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FKM99_09910 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FKM99_09910 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FKM99_09915 PF00483 Nucleotidyl transferase FKM99_09920 PF00121 Triosephosphate isomerase FKM99_09940 PF08220 DeoR-like helix-turn-helix domain FKM99_09940 PF00455 DeoR C terminal sensor domain FKM99_09945 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded FKM99_09955 PF06005 Cell division protein ZapB FKM99_09960 PF03737 Aldolase/RraA FKM99_09965 PF01040 UbiA prenyltransferase family FKM99_09970 PF00004 ATPase family associated with various cellular activities (AAA) FKM99_09970 PF07724 AAA domain (Cdc48 subfamily) FKM99_09975 PF00227 Proteasome subunit FKM99_09985 PF00356 Bacterial regulatory proteins, lacI family FKM99_09990 PF00270 DEAD/DEAH box helicase FKM99_09990 PF17764 3′ DNA-binding domain (3′BD) FKM99_09990 PF18074 Primosomal protein N C-terminal domain FKM99_09990 PF00271 Helicase conserved C-terminal domain FKM99_09990 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FKM99_10000 PF01197 Ribosomal protein L31 FKM99_10005 PF00338 Ribosomal protein S10p/S20e FKM99_10010 PF00297 Ribosomal protein L3 FKM99_10015 PF00573 Ribosomal protein L4/L1 family FKM99_10020 PF00276 Ribosomal protein L23 FKM99_10025 PF00181 Ribosomal Proteins L2, RNA binding domain FKM99_10025 PF03947 Ribosomal Proteins L2, C-terminal domain FKM99_10030 PF00203 Ribosomal protein S19 FKM99_10035 PF00237 Ribosomal protein L22p/L17e FKM99_10040 PF07650 KH domain FKM99_10040 PF00189 Ribosomal protein S3, C-terminal domain FKM99_10045 PF00252 Ribosomal protein L16p/L10e FKM99_10050 PF00831 Ribosomal L29 protein FKM99_10055 PF00366 Ribosomal protein S17 FKM99_10060 PF00238 Ribosomal protein L14p/L23e FKM99_10065 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FKM99_10065 PF00467 KOW motif FKM99_10070 PF00673 ribosomal L5P family C-terminus FKM99_10070 PF00281 Ribosomal protein L5 FKM99_10075 PF00253 Ribosomal protein S14p/S29e FKM99_10080 PF00410 Ribosomal protein S8 FKM99_10085 PF00347 Ribosomal protein L6 FKM99_10090 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FKM99_10095 PF03719 Ribosomal protein S5, C-terminal domain FKM99_10095 PF00333 Ribosomal protein S5, N-terminal domain FKM99_10100 PF00327 Ribosomal protein L30p/L7e FKM99_10105 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FKM99_10110 PF00344 SecY translocase FKM99_10115 PF00444 Ribosomal protein L36 FKM99_10120 PF00416 Ribosomal protein S13/S18 FKM99_10125 PF00411 Ribosomal protein S11 FKM99_10130 PF00163 Ribosomal protein S4/S9 N-terminal domain FKM99_10130 PF01479 S4 domain FKM99_10135 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FKM99_10135 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FKM99_10135 PF01000 RNA polymerase Rpb3/RpoA insert domain FKM99_10140 PF01196 Ribosomal protein L17 FKM99_10150 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FKM99_10150 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FKM99_10160 PF13673 Acetyltransferase (GNAT) domain FKM99_10165 PF00271 Helicase conserved C-terminal domain FKM99_10165 PF00270 DEAD/DEAH box helicase FKM99_10165 PF03880 DbpA RNA binding domain FKM99_10175 PF00149 Calcineurin-like phosphoesterase FKM99_10175 PF02872 5'-nucleotidase, C-terminal domain FKM99_10180 PF14824 Sirohaem biosynthesis protein central FKM99_10180 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FKM99_10180 PF10414 Sirohaem synthase dimerisation region FKM99_10185 PF01507 Phosphoadenosine phosphosulfate reductase family FKM99_10190 PF00009 Elongation factor Tu GTP binding domain FKM99_10200 PF03600 Citrate transporter FKM99_10200 PF02080 TrkA-C domain FKM99_10225 PF00005 ABC transporter FKM99_10235 PF10795 Protein of unknown function (DUF2607) FKM99_10240 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) FKM99_10245 PF06526 Protein of unknown function (DUF1107) FKM99_10250 PF01625 Peptide methionine sulfoxide reductase FKM99_10255 PF01103 Surface antigen FKM99_10255 PF17243 POTRA domain TamA domain 1 FKM99_10260 PF04357 TamB, inner membrane protein subunit of TAM complex FKM99_10265 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like FKM99_10275 PF00719 Inorganic pyrophosphatase FKM99_10280 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain FKM99_10290 PF02875 Mur ligase family, glutamate ligase domain FKM99_10290 PF01225 Mur ligase family, catalytic domain FKM99_10290 PF08245 Mur ligase middle domain FKM99_10295 PF02441 Flavoprotein FKM99_10305 PF00528 Binding-protein-dependent transport system inner membrane component FKM99_10310 PF00005 ABC transporter FKM99_10330 PF16868 NMT1-like family FKM99_10340 PF02863 Arginine repressor, C-terminal domain FKM99_10340 PF01316 Arginine repressor, DNA binding domain FKM99_10345 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FKM99_10345 PF00056 lactate/malate dehydrogenase, NAD binding domain FKM99_10355 PF00348 Polyprenyl synthetase FKM99_10360 PF00829 Ribosomal prokaryotic L21 protein FKM99_10365 PF01016 Ribosomal L27 protein FKM99_10370 PF01018 GTP1/OBG FKM99_10370 PF01926 50S ribosome-binding GTPase FKM99_10375 PF06738 Putative threonine/serine exporter FKM99_10380 PF12821 Threonine/Serine exporter, ThrE FKM99_10385 PF00186 Dihydrofolate reductase FKM99_10390 PF00149 Calcineurin-like phosphoesterase FKM99_10395 PF04379 ApaG domain FKM99_10400 PF00398 Ribosomal RNA adenine dimethylase FKM99_10405 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FKM99_10410 PF09312 SurA N-terminal domain FKM99_10415 PF03968 OstA-like protein FKM99_10415 PF04453 LPS transport system D FKM99_10420 PF00226 DnaJ domain FKM99_10420 PF05099 Tellurite resistance protein TerB FKM99_10430 PF00694 Aconitase C-terminal domain FKM99_10435 PF00330 Aconitase family (aconitate hydratase) FKM99_10440 PF00180 Isocitrate/isopropylmalate dehydrogenase FKM99_10445 PF08502 LeuA allosteric (dimerisation) domain FKM99_10445 PF00682 HMGL-like FKM99_10460 PF01569 PAP2 superfamily FKM99_10470 PF03466 LysR substrate binding domain FKM99_10470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_10475 PF00501 AMP-binding enzyme FKM99_10480 PF00205 Thiamine pyrophosphate enzyme, central domain FKM99_10480 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FKM99_10480 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FKM99_10485 PF10369 Small subunit of acetolactate synthase FKM99_10490 PF00990 Diguanylate cyclase, GGDEF domain FKM99_10490 PF07694 5TMR of 5TMR-LYT FKM99_10500 PF00224 Pyruvate kinase, barrel domain FKM99_10500 PF02887 Pyruvate kinase, alpha/beta domain FKM99_10510 PF08220 DeoR-like helix-turn-helix domain FKM99_10510 PF00455 DeoR C terminal sensor domain FKM99_10515 PF01380 SIS domain FKM99_10525 PF00486 Transcriptional regulatory protein, C terminal FKM99_10525 PF00072 Response regulator receiver domain FKM99_10530 PF00672 HAMP domain FKM99_10530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_10530 PF00512 His Kinase A (phospho-acceptor) domain FKM99_10535 PF00465 Iron-containing alcohol dehydrogenase FKM99_10540 PF02733 Dak1 domain FKM99_10545 PF02734 DAK2 domain FKM99_10550 PF00391 PEP-utilising enzyme, mobile domain FKM99_10550 PF05524 PEP-utilising enzyme, N-terminal FKM99_10550 PF02896 PEP-utilising enzyme, TIM barrel domain FKM99_10555 PF02954 Bacterial regulatory protein, Fis family FKM99_10555 PF00158 Sigma-54 interaction domain FKM99_10555 PF00989 PAS fold FKM99_10560 PF05068 Mannitol repressor FKM99_10565 PF01232 Mannitol dehydrogenase Rossmann domain FKM99_10565 PF08125 Mannitol dehydrogenase C-terminal domain FKM99_10570 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FKM99_10570 PF02378 Phosphotransferase system, EIIC FKM99_10570 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FKM99_10605 PF03180 NLPA lipoprotein FKM99_10650 PF05175 Methyltransferase small domain FKM99_10675 PF01420 Type I restriction modification DNA specificity domain FKM99_10680 PF02384 N-6 DNA Methylase FKM99_10680 PF12161 HsdM N-terminal domain FKM99_10695 PF04851 Type III restriction enzyme, res subunit FKM99_10695 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) FKM99_10695 PF08463 EcoEI R protein C-terminal FKM99_10695 PF00271 Helicase conserved C-terminal domain FKM99_10720 PF11638 DnaA N-terminal domain FKM99_10720 PF08299 Bacterial dnaA protein helix-turn-helix FKM99_10720 PF00308 Bacterial dnaA protein FKM99_10730 PF13657 HipA N-terminal domain FKM99_10730 PF07804 HipA-like C-terminal domain FKM99_10745 PF04539 Sigma-70 region 3 FKM99_10745 PF04545 Sigma-70, region 4 FKM99_10745 PF04542 Sigma-70 region 2 FKM99_10745 PF00140 Sigma-70 factor, region 1.2 FKM99_10745 PF04546 Sigma-70, non-essential region FKM99_10745 PF03979 Sigma-70 factor, region 1.1 FKM99_10750 PF08275 DNA primase catalytic core, N-terminal domain FKM99_10750 PF08278 DNA primase DnaG DnaB-binding FKM99_10750 PF10410 DnaB-helicase binding domain of primase FKM99_10750 PF01807 CHC2 zinc finger FKM99_10755 PF09424 Yqey-like protein FKM99_10760 PF01165 Ribosomal protein S21 FKM99_10765 PF00814 Glycoprotease family FKM99_10770 PF12697 Alpha/beta hydrolase family FKM99_10775 PF02660 Glycerol-3-phosphate acyltransferase FKM99_10780 PF02152 Dihydroneopterin aldolase FKM99_10785 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FKM99_10790 PF02673 Bacitracin resistance protein BacA FKM99_10795 PF01966 HD domain FKM99_10795 PF12627 Probable RNA and SrmB- binding site of polymerase A FKM99_10795 PF01743 Poly A polymerase head domain FKM99_10800 PF13401 AAA domain FKM99_10800 PF01471 Putative peptidoglycan binding domain FKM99_10810 PF08239 Bacterial SH3 domain FKM99_10815 PF01384 Phosphate transporter family FKM99_10820 PF01865 Protein of unknown function DUF47 FKM99_10825 PF01928 CYTH domain FKM99_10835 PF00672 HAMP domain FKM99_10835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FKM99_10840 PF03710 Glutamate-ammonia ligase adenylyltransferase FKM99_10840 PF08335 GlnD PII-uridylyltransferase FKM99_10845 PF00294 pfkB family carbohydrate kinase FKM99_10845 PF01467 Cytidylyltransferase-like FKM99_10850 PF02321 Outer membrane efflux protein FKM99_10855 PF00293 NUDIX domain FKM99_10860 PF06853 Protein of unknown function (DUF1249) FKM99_10865 PF00149 Calcineurin-like phosphoesterase FKM99_10870 PF05728 Uncharacterised protein family (UPF0227) FKM99_10875 PF00204 DNA gyrase B FKM99_10875 PF00986 DNA gyrase B subunit, carboxyl terminus FKM99_10875 PF01751 Toprim domain FKM99_10875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_10880 PF03989 DNA gyrase C-terminal domain, beta-propeller FKM99_10880 PF00521 DNA gyrase/topoisomerase IV, subunit A FKM99_10885 PF13180 PDZ domain FKM99_10890 PF00595 PDZ domain FKM99_10895 PF06295 Protein of unknown function (DUF1043) FKM99_10905 PF03969 AFG1-like ATPase FKM99_10915 PF00572 Ribosomal protein L13 FKM99_10920 PF00380 Ribosomal protein S9/S16 FKM99_10925 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal FKM99_10925 PF00355 Rieske [2Fe-2S] domain FKM99_10930 PF00032 Cytochrome b(C-terminal)/b6/petD FKM99_10930 PF00033 Cytochrome b/b6/petB FKM99_10935 PF02167 Cytochrome C1 family FKM99_10940 PF02798 Glutathione S-transferase, N-terminal domain FKM99_10940 PF00043 Glutathione S-transferase, C-terminal domain FKM99_10945 PF04386 Stringent starvation protein B FKM99_10950 PF04972 BON domain FKM99_10955 PF13580 SIS domain FKM99_10960 PF02021 Uncharacterised protein family UPF0102 FKM99_10965 PF04348 LppC putative lipoprotein FKM99_10970 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FKM99_10985 PF01795 MraW methylase family FKM99_10990 PF04999 Cell division protein FtsL FKM99_10995 PF03717 Penicillin-binding Protein dimerisation domain FKM99_10995 PF00905 Penicillin binding protein transpeptidase domain FKM99_11000 PF02875 Mur ligase family, glutamate ligase domain FKM99_11000 PF01225 Mur ligase family, catalytic domain FKM99_11000 PF08245 Mur ligase middle domain FKM99_11005 PF02875 Mur ligase family, glutamate ligase domain FKM99_11005 PF01225 Mur ligase family, catalytic domain FKM99_11005 PF08245 Mur ligase middle domain FKM99_11010 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FKM99_11010 PF00953 Glycosyl transferase family 4 FKM99_11015 PF02875 Mur ligase family, glutamate ligase domain FKM99_11015 PF08245 Mur ligase middle domain FKM99_11020 PF01098 Cell cycle protein FKM99_11025 PF03033 Glycosyltransferase family 28 N-terminal domain FKM99_11025 PF04101 Glycosyltransferase family 28 C-terminal domain FKM99_11030 PF01225 Mur ligase family, catalytic domain FKM99_11030 PF02875 Mur ligase family, glutamate ligase domain FKM99_11030 PF08245 Mur ligase middle domain FKM99_11035 PF03799 Cell division protein FtsQ FKM99_11035 PF08478 POTRA domain, FtsQ-type FKM99_11040 PF02491 SHS2 domain inserted in FTSA FKM99_11045 PF00091 Tubulin/FtsZ family, GTPase domain FKM99_11045 PF12327 FtsZ family, C-terminal domain FKM99_11050 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FKM99_11060 PF07516 SecA Wing and Scaffold domain FKM99_11060 PF07517 SecA DEAD-like domain FKM99_11060 PF01043 SecA preprotein cross-linking domain FKM99_11060 PF02810 SEC-C motif FKM99_11065 PF00293 NUDIX domain FKM99_11070 PF05173 Dihydrodipicolinate reductase, C-terminus FKM99_11070 PF01113 Dihydrodipicolinate reductase, N-terminus FKM99_11075 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FKM99_11075 PF00117 Glutamine amidotransferase class-I FKM99_11080 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FKM99_11080 PF02142 MGS-like domain FKM99_11080 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FKM99_11095 PF01925 Sulfite exporter TauE/SafE FKM99_11110 PF03466 LysR substrate binding domain FKM99_11110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_11115 PF03458 UPF0126 domain FKM99_11120 PF01497 Periplasmic binding protein FKM99_11125 PF03186 CobD/Cbib protein FKM99_11125 PF17113 Regulatory signalling modulator protein AmpE FKM99_11130 PF01048 Phosphorylase superfamily FKM99_11140 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FKM99_11140 PF07992 Pyridine nucleotide-disulphide oxidoreductase FKM99_11145 PF00310 Glutamine amidotransferases class-II FKM99_11145 PF04898 Glutamate synthase central domain FKM99_11145 PF01645 Conserved region in glutamate synthase FKM99_11145 PF01493 GXGXG motif FKM99_11150 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FKM99_11150 PF07992 Pyridine nucleotide-disulphide oxidoreductase FKM99_11155 PF00310 Glutamine amidotransferases class-II FKM99_11155 PF04898 Glutamate synthase central domain FKM99_11155 PF01645 Conserved region in glutamate synthase FKM99_11155 PF01493 GXGXG motif FKM99_11160 PF04055 Radical SAM superfamily FKM99_11160 PF16199 Radical_SAM C-terminal domain FKM99_11165 PF00563 EAL domain FKM99_11165 PF01590 GAF domain FKM99_11165 PF00990 Diguanylate cyclase, GGDEF domain FKM99_11165 PF00360 Phytochrome region FKM99_11170 PF01627 Hpt domain FKM99_11170 PF00072 Response regulator receiver domain FKM99_11170 PF18415 Histidine kinase receptor ArcB trans-membrane domain FKM99_11170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_11170 PF00989 PAS fold FKM99_11170 PF00512 His Kinase A (phospho-acceptor) domain FKM99_11180 PF00486 Transcriptional regulatory protein, C terminal FKM99_11180 PF00072 Response regulator receiver domain FKM99_11195 PF03737 Aldolase/RraA FKM99_11205 PF13840 ACT domain FKM99_11205 PF00742 Homoserine dehydrogenase FKM99_11205 PF03447 Homoserine dehydrogenase, NAD binding domain FKM99_11205 PF01842 ACT domain FKM99_11205 PF00696 Amino acid kinase family FKM99_11210 PF08544 GHMP kinases C terminal FKM99_11210 PF00288 GHMP kinases N terminal domain FKM99_11215 PF00291 Pyridoxal-phosphate dependent enzyme FKM99_11215 PF14821 Threonine synthase N terminus FKM99_11220 PF01228 Glycine radical FKM99_11225 PF01261 Xylose isomerase-like TIM barrel FKM99_11235 PF03167 Uracil DNA glycosylase superfamily FKM99_11250 PF01235 Sodium:alanine symporter family FKM99_11255 PF03883 Peroxide stress protein YaaA FKM99_11260 PF00270 DEAD/DEAH box helicase FKM99_11260 PF00271 Helicase conserved C-terminal domain FKM99_11265 PF05175 Methyltransferase small domain FKM99_11270 PF05525 Branched-chain amino acid transport protein FKM99_11275 PF00258 Flavodoxin FKM99_11280 PF00589 Phage integrase family FKM99_11280 PF02899 Phage integrase, N-terminal SAM-like domain FKM99_11285 PF10411 Disulfide bond isomerase protein N-terminus FKM99_11285 PF13098 Thioredoxin-like domain FKM99_11290 PF01368 DHH family FKM99_11290 PF02272 DHHA1 domain FKM99_11290 PF17768 RecJ OB domain FKM99_11300 PF00152 tRNA synthetases class II (D, K and N) FKM99_11300 PF01336 OB-fold nucleic acid binding domain FKM99_11305 PF00158 Sigma-54 interaction domain FKM99_11305 PF02954 Bacterial regulatory protein, Fis family FKM99_11305 PF00072 Response regulator receiver domain FKM99_11315 PF00248 Aldo/keto reductase family FKM99_11325 PF02976 DNA mismatch repair enzyme MutH FKM99_11335 PF00293 NUDIX domain FKM99_11340 PF02896 PEP-utilising enzyme, TIM barrel domain FKM99_11340 PF05524 PEP-utilising enzyme, N-terminal FKM99_11340 PF00391 PEP-utilising enzyme, mobile domain FKM99_11340 PF01590 GAF domain FKM99_11345 PF01925 Sulfite exporter TauE/SafE FKM99_11350 PF01790 Prolipoprotein diacylglyceryl transferase FKM99_11355 PF00303 Thymidylate synthase FKM99_11365 PF02690 Na+/Pi-cotransporter FKM99_11370 PF03466 LysR substrate binding domain FKM99_11370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_11380 PF01022 Bacterial regulatory protein, arsR family FKM99_11390 PF01649 Ribosomal protein S20 FKM99_11395 PF03023 Lipid II flippase MurJ FKM99_11400 PF06574 FAD synthetase FKM99_11400 PF01687 Riboflavin kinase FKM99_11405 PF08264 Anticodon-binding domain of tRNA FKM99_11405 PF06827 Zinc finger found in FPG and IleRS FKM99_11405 PF00133 tRNA synthetases class I (I, L, M and V) FKM99_11410 PF01252 Signal peptidase (SPase) II FKM99_11415 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FKM99_11420 PF02401 LytB protein FKM99_11425 PF00072 Response regulator receiver domain FKM99_11425 PF04397 LytTr DNA-binding domain FKM99_11430 PF06580 Histidine kinase FKM99_11430 PF07694 5TMR of 5TMR-LYT FKM99_11435 PF02554 Carbon starvation protein CstA FKM99_11450 PF13580 SIS domain FKM99_11455 PF03702 Anhydro-N-acetylmuramic acid kinase FKM99_11460 PF00933 Glycosyl hydrolase family 3 N terminal domain FKM99_11465 PF00793 DAHP synthetase I family FKM99_11470 PF02153 Prephenate dehydrogenase FKM99_11470 PF01817 Chorismate mutase type II FKM99_11475 PF04225 Opacity-associated protein A LysM-like domain FKM99_11475 PF01551 Peptidase family M23 FKM99_11480 PF07238 PilZ domain FKM99_11490 PF12848 ABC transporter FKM99_11490 PF00005 ABC transporter FKM99_11495 PF01464 Transglycosylase SLT domain FKM99_11495 PF14718 Soluble lytic murein transglycosylase L domain FKM99_11500 PF01371 Trp repressor protein FKM99_11505 PF01931 Protein of unknown function DUF84 FKM99_11510 PF01817 Chorismate mutase type II FKM99_11510 PF00800 Prephenate dehydratase FKM99_11515 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FKM99_11520 PF01464 Transglycosylase SLT domain FKM99_11525 PF13525 Outer membrane lipoprotein FKM99_11530 PF01479 S4 domain FKM99_11530 PF00849 RNA pseudouridylate synthase FKM99_11540 PF10431 C-terminal, D2-small domain, of ClpB protein FKM99_11540 PF17871 AAA lid domain FKM99_11540 PF07724 AAA domain (Cdc48 subfamily) FKM99_11540 PF02861 Clp amino terminal domain, pathogenicity island component FKM99_11540 PF00004 ATPase family associated with various cellular activities (AAA) FKM99_11590 PF03411 Penicillin-insensitive murein endopeptidase FKM99_11600 PF00037 4Fe-4S binding domain FKM99_11610 PF04381 Putative exonuclease, RdgC FKM99_11620 PF00072 Response regulator receiver domain FKM99_11620 PF00486 Transcriptional regulatory protein, C terminal FKM99_11625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_11625 PF00989 PAS fold FKM99_11625 PF11808 Phosphate regulon sensor protein PhoR FKM99_11625 PF00512 His Kinase A (phospho-acceptor) domain FKM99_11630 PF12849 PBP superfamily domain FKM99_11635 PF02541 Ppx/GppA phosphatase family FKM99_11640 PF02503 Polyphosphate kinase middle domain FKM99_11640 PF13090 Polyphosphate kinase C-terminal domain 2 FKM99_11640 PF17941 Polyphosphate kinase C-terminal domain 1 FKM99_11640 PF13089 Polyphosphate kinase N-terminal domain FKM99_11645 PF00528 Binding-protein-dependent transport system inner membrane component FKM99_11650 PF00528 Binding-protein-dependent transport system inner membrane component FKM99_11655 PF00005 ABC transporter FKM99_11660 PF01895 PhoU domain FKM99_11665 PF03976 Polyphosphate kinase 2 (PPK2) FKM99_11670 PF03932 CutC family FKM99_11680 PF00578 AhpC/TSA family FKM99_11680 PF10417 C-terminal domain of 1-Cys peroxiredoxin FKM99_11685 PF03466 LysR substrate binding domain FKM99_11685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_11695 PF01274 Malate synthase FKM99_11700 PF00463 Isocitrate lyase family FKM99_11705 PF00571 CBS domain FKM99_11720 PF02547 Queuosine biosynthesis protein FKM99_11725 PF01702 Queuine tRNA-ribosyltransferase FKM99_11730 PF02699 Preprotein translocase subunit FKM99_11735 PF02355 Protein export membrane protein FKM99_11735 PF07549 SecD/SecF GG Motif FKM99_11735 PF13721 SecD export protein N-terminal TM region FKM99_11740 PF07549 SecD/SecF GG Motif FKM99_11740 PF02355 Protein export membrane protein FKM99_11750 PF00459 Inositol monophosphatase family FKM99_11755 PF00588 SpoU rRNA Methylase family FKM99_11760 PF02082 Transcriptional regulator FKM99_11765 PF00266 Aminotransferase class-V FKM99_11770 PF01592 NifU-like N terminal domain FKM99_11775 PF01521 Iron-sulphur cluster biosynthesis FKM99_11780 PF07743 HSCB C-terminal oligomerisation domain FKM99_11780 PF00226 DnaJ domain FKM99_11785 PF00012 Hsp70 protein FKM99_11790 PF00111 2Fe-2S iron-sulfur cluster binding domain FKM99_11795 PF04384 Iron-sulphur cluster assembly FKM99_11800 PF12404 Peptidase FKM99_11800 PF00883 Cytosol aminopeptidase family, catalytic domain FKM99_11805 PF00334 Nucleoside diphosphate kinase FKM99_11810 PF04055 Radical SAM superfamily FKM99_11820 PF13464 Domain of unknown function (DUF4115) FKM99_11825 PF04551 GcpE protein FKM99_11830 PF13393 Histidyl-tRNA synthetase FKM99_11830 PF03129 Anticodon binding domain FKM99_11835 PF09976 Tetratricopeptide repeat-like domain FKM99_11840 PF13360 PQQ-like domain FKM99_11845 PF01926 50S ribosome-binding GTPase FKM99_11845 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FKM99_11860 PF02601 Exonuclease VII, large subunit FKM99_11860 PF13742 OB-fold nucleic acid binding domain FKM99_11865 PF00478 IMP dehydrogenase / GMP reductase domain FKM99_11865 PF00571 CBS domain FKM99_11870 PF00117 Glutamine amidotransferase class-I FKM99_11870 PF00958 GMP synthase C terminal domain FKM99_11870 PF02540 NAD synthase FKM99_11875 PF03553 Na+/H+ antiporter family FKM99_11880 PF06483 Chitinase C FKM99_11880 PF00704 Glycosyl hydrolases family 18 FKM99_11885 PF01184 GPR1/FUN34/yaaH family FKM99_11895 PF01235 Sodium:alanine symporter family FKM99_11900 PF01266 FAD dependent oxidoreductase FKM99_11905 PF03466 LysR substrate binding domain FKM99_11905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_11925 PF07969 Amidohydrolase family FKM99_11935 PF01053 Cys/Met metabolism PLP-dependent enzyme FKM99_11940 PF00202 Aminotransferase class-III FKM99_11945 PF05853 beta-keto acid cleavage enzyme FKM99_11960 PF00583 Acetyltransferase (GNAT) family FKM99_11960 PF00795 Carbon-nitrogen hydrolase FKM99_11965 PF03466 LysR substrate binding domain FKM99_11965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_12010 PF00990 Diguanylate cyclase, GGDEF domain FKM99_12025 PF00239 Resolvase, N terminal domain FKM99_12025 PF02796 Helix-turn-helix domain of resolvase FKM99_12040 PF01420 Type I restriction modification DNA specificity domain FKM99_12045 PF02384 N-6 DNA Methylase FKM99_12045 PF12161 HsdM N-terminal domain FKM99_12075 PF01555 DNA methylase FKM99_12085 PF04851 Type III restriction enzyme, res subunit FKM99_12085 PF08463 EcoEI R protein C-terminal FKM99_12085 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) FKM99_12085 PF00271 Helicase conserved C-terminal domain FKM99_12100 PF13356 Arm DNA-binding domain FKM99_12100 PF00589 Phage integrase family FKM99_12110 PF01668 SmpB protein FKM99_12115 PF03364 Polyketide cyclase / dehydrase and lipid transport FKM99_12120 PF03658 RnfH family Ubiquitin FKM99_12125 PF04355 SmpA / OmlA family FKM99_12130 PF02463 RecF/RecN/SMC N terminal domain FKM99_12140 PF01513 ATP-NAD kinase FKM99_12145 PF01025 GrpE FKM99_12150 PF00375 Sodium:dicarboxylate symporter family FKM99_12155 PF00012 Hsp70 protein FKM99_12160 PF00684 DnaJ central domain FKM99_12160 PF01556 DnaJ C terminal domain FKM99_12160 PF00226 DnaJ domain FKM99_12170 PF00114 Pilin (bacterial filament) FKM99_12170 PF07963 Prokaryotic N-terminal methylation motif FKM99_12175 PF07963 Prokaryotic N-terminal methylation motif FKM99_12175 PF00114 Pilin (bacterial filament) FKM99_12200 PF03806 AbgT putative transporter family FKM99_12205 PF14437 MafB19-like deaminase FKM99_12215 PF00497 Bacterial extracellular solute-binding proteins, family 3 FKM99_12215 PF01464 Transglycosylase SLT domain FKM99_12220 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FKM99_12220 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal FKM99_12220 PF02769 AIR synthase related protein, C-terminal domain FKM99_12245 PF01546 Peptidase family M20/M25/M40 FKM99_12245 PF07687 Peptidase dimerisation domain FKM99_12250 PF00860 Permease family FKM99_12255 PF00156 Phosphoribosyl transferase domain FKM99_12265 PF07417 Sigma factor-binding transcriptional regulator Crl FKM99_12270 PF00696 Amino acid kinase family FKM99_12270 PF01472 PUA domain FKM99_12275 PF00171 Aldehyde dehydrogenase family FKM99_12280 PF03477 ATP cone domain FKM99_12285 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FKM99_12285 PF01872 RibD C-terminal domain FKM99_12290 PF00677 Lumazine binding domain FKM99_12295 PF00925 GTP cyclohydrolase II FKM99_12295 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FKM99_12300 PF00885 6,7-dimethyl-8-ribityllumazine synthase FKM99_12305 PF01029 NusB family FKM99_12310 PF02769 AIR synthase related protein, C-terminal domain FKM99_12310 PF00586 AIR synthase related protein, N-terminal domain FKM99_12315 PF04608 Phosphatidylglycerophosphatase A FKM99_12320 PF02780 Transketolase, C-terminal domain FKM99_12320 PF02779 Transketolase, pyrimidine binding domain FKM99_12320 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FKM99_12325 PF00348 Polyprenyl synthetase FKM99_12330 PF02609 Exonuclease VII small subunit FKM99_12335 PF01618 MotA/TolQ/ExbB proton channel family FKM99_12340 PF00691 OmpA family FKM99_12345 PF02926 THUMP domain FKM99_12345 PF02568 Thiamine biosynthesis protein (ThiI) FKM99_12350 PF03466 LysR substrate binding domain FKM99_12350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_12360 PF04241 Protein of unknown function (DUF423) FKM99_12365 PF18125 RlmM ferredoxin-like domain FKM99_12365 PF01728 FtsJ-like methyltransferase FKM99_12370 PF01223 DNA/RNA non-specific endonuclease FKM99_12375 PF01367 5'-3' exonuclease, C-terminal SAM fold FKM99_12375 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FKM99_12380 PF03641 Possible lysine decarboxylase FKM99_12380 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases FKM99_12380 PF11892 Domain of unknown function (DUF3412) FKM99_12385 PF00990 Diguanylate cyclase, GGDEF domain FKM99_12385 PF00072 Response regulator receiver domain FKM99_12395 PF14489 QueF-like protein FKM99_12395 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term FKM99_12400 PF07348 Syd protein (SUKH-2) FKM99_12405 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) FKM99_12410 PF03180 NLPA lipoprotein FKM99_12415 PF00528 Binding-protein-dependent transport system inner membrane component FKM99_12420 PF00005 ABC transporter FKM99_12420 PF09383 NIL domain FKM99_12435 PF00356 Bacterial regulatory proteins, lacI family FKM99_12440 PF02378 Phosphotransferase system, EIIC FKM99_12440 PF00367 phosphotransferase system, EIIB FKM99_12445 PF16657 Maltogenic Amylase, C-terminal domain FKM99_12445 PF00128 Alpha amylase, catalytic domain FKM99_12460 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 FKM99_12460 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) FKM99_12465 PF00464 Serine hydroxymethyltransferase FKM99_12470 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family FKM99_12470 PF04055 Radical SAM superfamily FKM99_12475 PF03099 Biotin/lipoate A/B protein ligase family FKM99_12480 PF04359 Protein of unknown function (DUF493) FKM99_12485 PF00768 D-alanyl-D-alanine carboxypeptidase FKM99_12485 PF07943 Penicillin-binding protein 5, C-terminal domain FKM99_12490 PF05036 Sporulation related domain FKM99_12490 PF03330 Lytic transglycolase FKM99_12495 PF01098 Cell cycle protein FKM99_12500 PF03717 Penicillin-binding Protein dimerisation domain FKM99_12500 PF00905 Penicillin binding protein transpeptidase domain FKM99_12505 PF02590 Predicted SPOUT methyltransferase FKM99_12515 PF14840 Processivity clamp loader gamma complex DNA pol III C-term FKM99_12515 PF06144 DNA polymerase III, delta subunit FKM99_12520 PF04390 Lipopolysaccharide-assembly FKM99_12525 PF00133 tRNA synthetases class I (I, L, M and V) FKM99_12525 PF08264 Anticodon-binding domain of tRNA FKM99_12525 PF13603 Leucyl-tRNA synthetase, Domain 2 FKM99_12530 PF07295 Zinc-ribbon containing domain FKM99_12535 PF00795 Carbon-nitrogen hydrolase FKM99_12540 PF00571 CBS domain FKM99_12540 PF03471 Transporter associated domain FKM99_12545 PF02130 Uncharacterized protein family UPF0054 FKM99_12550 PF02562 PhoH-like protein FKM99_12555 PF04055 Radical SAM superfamily FKM99_12555 PF00919 Uncharacterized protein family UPF0004 FKM99_12555 PF01938 TRAM domain FKM99_12565 PF01494 FAD binding domain FKM99_12665 PF06071 Protein of unknown function (DUF933) FKM99_12665 PF01926 50S ribosome-binding GTPase FKM99_12670 PF01195 Peptidyl-tRNA hydrolase FKM99_12675 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FKM99_12675 PF14572 Phosphoribosyl synthetase-associated domain FKM99_12680 PF08544 GHMP kinases C terminal FKM99_12680 PF00288 GHMP kinases N terminal domain FKM99_12685 PF03550 Outer membrane lipoprotein LolB FKM99_12690 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain FKM99_12690 PF01488 Shikimate / quinate 5-dehydrogenase FKM99_12690 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain FKM99_12695 PF00472 RF-1 domain FKM99_12695 PF03462 PCRF domain FKM99_12700 PF17827 PrmC N-terminal domain FKM99_12700 PF13847 Methyltransferase domain FKM99_12705 PF04247 Invasion gene expression up-regulator, SirB FKM99_12710 PF13369 Transglutaminase-like superfamily FKM99_12715 PF00793 DAHP synthetase I family FKM99_12720 PF02872 5'-nucleotidase, C-terminal domain FKM99_12720 PF00149 Calcineurin-like phosphoesterase FKM99_12725 PF04073 Aminoacyl-tRNA editing domain FKM99_12730 PF00849 RNA pseudouridylate synthase FKM99_12730 PF01479 S4 domain FKM99_12735 PF01713 Smr domain FKM99_12760 PF03173 Putative carbohydrate binding domain FKM99_12760 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain FKM99_12760 PF02838 Glycosyl hydrolase family 20, domain 2 FKM99_12760 PF00728 Glycosyl hydrolase family 20, catalytic domain FKM99_12775 PF00403 Heavy-metal-associated domain FKM99_12785 PF13609 Gram-negative porin FKM99_12790 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) FKM99_12795 PF00749 tRNA synthetases class I (E and Q), catalytic domain FKM99_12805 PF00691 OmpA family FKM99_12805 PF01389 OmpA-like transmembrane domain FKM99_12855 PF00072 Response regulator receiver domain FKM99_12855 PF01584 CheW-like domain FKM99_12860 PF01739 CheR methyltransferase, SAM binding domain FKM99_12860 PF03705 CheR methyltransferase, all-alpha domain FKM99_12865 PF00460 Flagella basal body rod protein FKM99_12870 PF00460 Flagella basal body rod protein FKM99_12870 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FKM99_12875 PF13861 FlgD Tudor-like domain FKM99_12875 PF13860 FlgD Ig-like domain FKM99_12875 PF03963 Flagellar hook capping protein - N-terminal region FKM99_12880 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FKM99_12880 PF07559 Flagellar basal body protein FlaE FKM99_12880 PF00460 Flagella basal body rod protein FKM99_12890 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FKM99_12890 PF00460 Flagella basal body rod protein FKM99_12895 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FKM99_12895 PF00460 Flagella basal body rod protein FKM99_12900 PF02107 Flagellar L-ring protein FKM99_12905 PF02119 Flagellar P-ring protein FKM99_12910 PF10135 Rod binding protein FKM99_12910 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FKM99_12915 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FKM99_12915 PF07196 Flagellin hook IN motif FKM99_12920 PF00669 Bacterial flagellin N-terminal helical region FKM99_12930 PF07196 Flagellin hook IN motif FKM99_12930 PF00700 Bacterial flagellin C-terminal helical region FKM99_12930 PF00669 Bacterial flagellin N-terminal helical region FKM99_12940 PF00700 Bacterial flagellin C-terminal helical region FKM99_12940 PF07196 Flagellin hook IN motif FKM99_12940 PF00669 Bacterial flagellin N-terminal helical region FKM99_12945 PF00700 Bacterial flagellin C-terminal helical region FKM99_12945 PF07196 Flagellin hook IN motif FKM99_12945 PF00669 Bacterial flagellin N-terminal helical region FKM99_12955 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FKM99_12960 PF02896 PEP-utilising enzyme, TIM barrel domain FKM99_12960 PF00391 PEP-utilising enzyme, mobile domain FKM99_12960 PF05524 PEP-utilising enzyme, N-terminal FKM99_12965 PF00381 PTS HPr component phosphorylation site FKM99_12975 PF00291 Pyridoxal-phosphate dependent enzyme FKM99_12985 PF04354 ZipA, C-terminal FtsZ-binding domain FKM99_12990 PF00533 BRCA1 C Terminus (BRCT) domain FKM99_12990 PF01653 NAD-dependent DNA ligase adenylation domain FKM99_12990 PF03120 NAD-dependent DNA ligase OB-fold domain FKM99_12990 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FKM99_12990 PF12826 Helix-hairpin-helix motif FKM99_13000 PF03573 outer membrane porin, OprD family FKM99_13015 PF16200 C-terminal region of band_7 FKM99_13015 PF01145 SPFH domain / Band 7 family FKM99_13020 PF11658 Cellulose biosynthesis protein BcsG FKM99_13025 PF10995 Cellulose biosynthesis GIL FKM99_13035 PF06564 Cellulose biosynthesis protein BcsQ FKM99_13040 PF00535 Glycosyl transferase family 2 FKM99_13040 PF03552 Cellulose synthase FKM99_13040 PF07238 PilZ domain FKM99_13045 PF03170 Bacterial cellulose synthase subunit FKM99_13050 PF01270 Glycosyl hydrolases family 8 FKM99_13055 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) FKM99_13060 PF00085 Thioredoxin FKM99_13070 PF00106 short chain dehydrogenase FKM99_13075 PF01370 NAD dependent epimerase/dehydratase family FKM99_13075 PF08338 Domain of unknown function (DUF1731) FKM99_13080 PF07556 Protein of unknown function (DUF1538) FKM99_13085 PF07556 Protein of unknown function (DUF1538) FKM99_13105 PF12850 Calcineurin-like phosphoesterase superfamily domain FKM99_13120 PF17323 Trans-membrane regulatory protein ToxS FKM99_13125 PF00486 Transcriptional regulatory protein, C terminal FKM99_13130 PF00183 Hsp90 protein FKM99_13130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_13135 PF05191 Adenylate kinase, active site lid FKM99_13140 PF00762 Ferrochelatase FKM99_13145 PF00854 POT family FKM99_13150 PF02357 Transcription termination factor nusG FKM99_13155 PF00733 Asparagine synthase FKM99_13155 PF13537 Glutamine amidotransferase domain FKM99_13160 PF00999 Sodium/hydrogen exchanger family FKM99_13160 PF02254 TrkA-N domain FKM99_13165 PF01047 MarR family FKM99_13165 PF00480 ROK family FKM99_13170 PF01979 Amidohydrolase family FKM99_13180 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FKM99_13180 PF00367 phosphotransferase system, EIIB FKM99_13180 PF02378 Phosphotransferase system, EIIC FKM99_13185 PF00749 tRNA synthetases class I (E and Q), catalytic domain FKM99_13185 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain FKM99_13190 PF01475 Ferric uptake regulator family FKM99_13200 PF00258 Flavodoxin FKM99_13210 PF12697 Alpha/beta hydrolase family FKM99_13215 PF17206 SeqA protein N-terminal domain FKM99_13215 PF03925 SeqA protein C-terminal domain FKM99_13220 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FKM99_13220 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FKM99_13220 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FKM99_13220 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FKM99_13230 PF01784 NIF3 (NGG1p interacting factor 3) FKM99_13235 PF00285 Citrate synthase, C-terminal domain FKM99_13240 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FKM99_13245 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FKM99_13250 PF00890 FAD binding domain FKM99_13250 PF02910 Fumarate reductase flavoprotein C-term FKM99_13255 PF13085 2Fe-2S iron-sulfur cluster binding domain FKM99_13260 PF16078 2-oxoglutarate dehydrogenase N-terminus FKM99_13260 PF00676 Dehydrogenase E1 component FKM99_13260 PF16870 2-oxoglutarate dehydrogenase C-terminal FKM99_13260 PF02779 Transketolase, pyrimidine binding domain FKM99_13265 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FKM99_13265 PF00364 Biotin-requiring enzyme FKM99_13265 PF02817 e3 binding domain FKM99_13270 PF08442 ATP-grasp domain FKM99_13270 PF00549 CoA-ligase FKM99_13275 PF02629 CoA binding domain FKM99_13275 PF00549 CoA-ligase FKM99_13280 PF00551 Formyl transferase FKM99_13285 PF02769 AIR synthase related protein, C-terminal domain FKM99_13285 PF00586 AIR synthase related protein, N-terminal domain FKM99_13295 PF00860 Permease family FKM99_13315 PF01435 Peptidase family M48 FKM99_13315 PF13181 Tetratricopeptide repeat FKM99_13325 PF01594 AI-2E family transporter FKM99_13330 PF00578 AhpC/TSA family FKM99_13335 PF01842 ACT domain FKM99_13340 PF00701 Dihydrodipicolinate synthetase family FKM99_13360 PF07687 Peptidase dimerisation domain FKM99_13360 PF01546 Peptidase family M20/M25/M40 FKM99_13365 PF03960 ArsC family FKM99_13390 PF11143 Protein of unknown function (DUF2919) FKM99_13395 PF04261 Dyp-type peroxidase family FKM99_13400 PF00700 Bacterial flagellin C-terminal helical region FKM99_13400 PF07196 Flagellin hook IN motif FKM99_13400 PF00669 Bacterial flagellin N-terminal helical region FKM99_13410 PF00700 Bacterial flagellin C-terminal helical region FKM99_13410 PF07196 Flagellin hook IN motif FKM99_13410 PF00669 Bacterial flagellin N-terminal helical region FKM99_13415 PF00700 Bacterial flagellin C-terminal helical region FKM99_13415 PF00669 Bacterial flagellin N-terminal helical region FKM99_13415 PF07196 Flagellin hook IN motif FKM99_13420 PF03646 FlaG protein FKM99_13425 PF02465 Flagellar hook-associated protein 2 N-terminus FKM99_13425 PF07195 Flagellar hook-associated protein 2 C-terminus FKM99_13425 PF07196 Flagellin hook IN motif FKM99_13435 PF02561 Flagellar protein FliS FKM99_13440 PF01590 GAF domain FKM99_13440 PF02954 Bacterial regulatory protein, Fis family FKM99_13440 PF00158 Sigma-54 interaction domain FKM99_13445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_13445 PF00512 His Kinase A (phospho-acceptor) domain FKM99_13450 PF00072 Response regulator receiver domain FKM99_13450 PF00158 Sigma-54 interaction domain FKM99_13450 PF02954 Bacterial regulatory protein, Fis family FKM99_13455 PF02049 Flagellar hook-basal body complex protein FliE FKM99_13460 PF01514 Secretory protein of YscJ/FliF family FKM99_13460 PF08345 Flagellar M-ring protein C-terminal FKM99_13465 PF14842 FliG N-terminal domain FKM99_13465 PF14841 FliG middle domain FKM99_13465 PF01706 FliG C-terminal domain FKM99_13475 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FKM99_13475 PF18269 T3SS EscN ATPase C-terminal domain FKM99_13495 PF02154 Flagellar motor switch protein FliM FKM99_13495 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FKM99_13500 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FKM99_13505 PF04347 Flagellar biosynthesis protein, FliO FKM99_13510 PF00813 FliP family FKM99_13515 PF01313 Bacterial export proteins, family 3 FKM99_13520 PF01311 Bacterial export proteins, family 1 FKM99_13525 PF01312 FlhB HrpN YscU SpaS Family FKM99_13530 PF00771 FHIPEP family FKM99_13535 PF00448 SRP54-type protein, GTPase domain FKM99_13540 PF10609 NUBPL iron-transfer P-loop NTPase FKM99_13545 PF04545 Sigma-70, region 4 FKM99_13545 PF04539 Sigma-70 region 3 FKM99_13545 PF04542 Sigma-70 region 2 FKM99_13550 PF00072 Response regulator receiver domain FKM99_13555 PF04344 Chemotaxis phosphatase, CheZ FKM99_13560 PF02895 Signal transducing histidine kinase, homodimeric domain FKM99_13560 PF01627 Hpt domain FKM99_13560 PF07194 P2 response regulator binding domain FKM99_13560 PF01584 CheW-like domain FKM99_13560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_13565 PF01339 CheB methylesterase FKM99_13565 PF00072 Response regulator receiver domain FKM99_13570 PF13614 AAA domain FKM99_13580 PF01584 CheW-like domain FKM99_13590 PF00005 ABC transporter FKM99_13595 PF03379 CcmB protein FKM99_13600 PF01578 Cytochrome C assembly protein FKM99_13605 PF04995 Heme exporter protein D (CcmD) FKM99_13610 PF03100 CcmE FKM99_13615 PF01578 Cytochrome C assembly protein FKM99_13615 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FKM99_13620 PF08534 Redoxin FKM99_13625 PF03918 Cytochrome C biogenesis protein FKM99_13635 PF04333 MlaA lipoprotein FKM99_13640 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FKM99_13645 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FKM99_13655 PF04542 Sigma-70 region 2 FKM99_13655 PF08281 Sigma-70, region 4 FKM99_13665 PF02803 Thiolase, C-terminal domain FKM99_13665 PF00108 Thiolase, N-terminal domain FKM99_13670 PF00378 Enoyl-CoA hydratase/isomerase FKM99_13670 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FKM99_13670 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FKM99_13680 PF00675 Insulinase (Peptidase family M16) FKM99_13680 PF05193 Peptidase M16 inactive domain FKM99_13680 PF16187 Middle or third domain of peptidase_M16 FKM99_13685 PF00300 Histidine phosphatase superfamily (branch 1) FKM99_13690 PF01713 Smr domain FKM99_13695 PF05175 Methyltransferase small domain FKM99_13700 PF01264 Chorismate synthase FKM99_13705 PF03458 UPF0126 domain FKM99_13715 PF04315 Elongation factor P hydroxylase FKM99_13720 PF08891 YfcL protein FKM99_13730 PF03358 NADPH-dependent FMN reductase FKM99_13795 PF07030 Protein of unknown function (DUF1320) FKM99_13805 PF10124 Mu-like prophage major head subunit gpT FKM99_13815 PF10123 Mu-like prophage I protein FKM99_13845 PF06074 Protein of unknown function (DUF935) FKM99_13850 PF03237 Terminase-like family FKM99_13860 PF08461 Ribonuclease R winged-helix domain FKM99_13885 PF08765 Mor transcription activator family FKM99_13915 PF06252 Protein of unknown function (DUF1018) FKM99_13960 PF09077 Mu B transposition protein, C terminal FKM99_13960 PF13401 AAA domain FKM99_13965 PF09039 Mu DNA binding, I gamma subdomain FKM99_13965 PF02914 Bacteriophage Mu transposase FKM99_13965 PF09299 Mu transposase, C-terminal FKM99_13965 PF02316 Mu DNA-binding domain FKM99_13975 PF13693 Winged helix-turn-helix DNA-binding FKM99_13980 PF01381 Helix-turn-helix FKM99_13980 PF00717 Peptidase S24-like FKM99_13990 PF00109 Beta-ketoacyl synthase, N-terminal domain FKM99_13990 PF02801 Beta-ketoacyl synthase, C-terminal domain FKM99_14000 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FKM99_14000 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FKM99_14000 PF11890 Domain of unknown function (DUF3410) FKM99_14005 PF02774 Semialdehyde dehydrogenase, dimerisation domain FKM99_14005 PF01118 Semialdehyde dehydrogenase, NAD binding domain FKM99_14015 PF01416 tRNA pseudouridine synthase FKM99_14020 PF01039 Carboxyl transferase domain FKM99_14020 PF17848 Acetyl-coA carboxylase zinc finger domain FKM99_14025 PF02875 Mur ligase family, glutamate ligase domain FKM99_14025 PF08245 Mur ligase middle domain FKM99_14030 PF05036 Sporulation related domain FKM99_14035 PF02674 Colicin V production protein FKM99_14040 PF00156 Phosphoribosyl transferase domain FKM99_14045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_14045 PF03466 LysR substrate binding domain FKM99_14050 PF00072 Response regulator receiver domain FKM99_14060 PF04304 Protein of unknown function (DUF454) FKM99_14065 PF00156 Phosphoribosyl transferase domain FKM99_14070 PF12170 DNA polymerase III tau subunit V interacting with alpha FKM99_14070 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding FKM99_14070 PF12169 DNA polymerase III subunits gamma and tau domain III FKM99_14075 PF02575 YbaB/EbfC DNA-binding family FKM99_14080 PF02132 RecR protein FKM99_14080 PF13662 Toprim domain FKM99_14085 PF00230 Major intrinsic protein FKM99_14095 PF01042 Endoribonuclease L-PSP FKM99_14100 PF03313 Serine dehydratase alpha chain FKM99_14110 PF03692 Putative zinc- or iron-chelating domain FKM99_14115 PF04226 Transglycosylase associated protein FKM99_14120 PF03692 Putative zinc- or iron-chelating domain FKM99_14125 PF05552 Conserved TM helix FKM99_14125 PF00924 Mechanosensitive ion channel FKM99_14130 PF03992 Antibiotic biosynthesis monooxygenase FKM99_14135 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FKM99_14145 PF00245 Alkaline phosphatase FKM99_14165 PF13847 Methyltransferase domain FKM99_14170 PF02743 Cache domain FKM99_14170 PF00672 HAMP domain FKM99_14170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FKM99_14175 PF01263 Aldose 1-epimerase FKM99_14180 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FKM99_14180 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FKM99_14185 PF01641 SelR domain FKM99_14195 PF07023 Protein of unknown function (DUF1315) FKM99_14200 PF00710 Asparaginase, N-terminal FKM99_14200 PF17763 Glutaminase/Asparaginase C-terminal domain FKM99_14205 PF01343 Peptidase family S49 FKM99_14210 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FKM99_14210 PF07992 Pyridine nucleotide-disulphide oxidoreductase FKM99_14215 PF00881 Nitroreductase family FKM99_14220 PF01131 DNA topoisomerase FKM99_14220 PF01751 Toprim domain FKM99_14235 PF00106 short chain dehydrogenase FKM99_14240 PF00850 Histone deacetylase domain FKM99_14260 PF00589 Phage integrase family FKM99_14260 PF12167 Arm DNA-binding domain FKM99_14280 PF11893 Domain of unknown function (DUF3413) FKM99_14280 PF00884 Sulfatase FKM99_14285 PF07208 Protein of unknown function (DUF1414) FKM99_14290 PF04245 37-kD nucleoid-associated bacterial protein FKM99_14305 PF03553 Na+/H+ antiporter family FKM99_14310 PF01118 Semialdehyde dehydrogenase, NAD binding domain FKM99_14310 PF02774 Semialdehyde dehydrogenase, dimerisation domain FKM99_14315 PF00520 Ion transport protein FKM99_14315 PF00027 Cyclic nucleotide-binding domain FKM99_14320 PF01914 MarC family integral membrane protein FKM99_14325 PF00465 Iron-containing alcohol dehydrogenase FKM99_14325 PF00171 Aldehyde dehydrogenase family FKM99_14340 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FKM99_14340 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FKM99_14345 PF00462 Glutaredoxin FKM99_14355 PF13726 Na+-H+ antiporter family FKM99_14355 PF03553 Na+/H+ antiporter family FKM99_14360 PF00929 Exonuclease FKM99_14375 PF00691 OmpA family FKM99_14375 PF18393 MotY N-terminal domain FKM99_14380 PF10952 Protein of unknown function (DUF2753) FKM99_14385 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FKM99_14390 PF00633 Helix-hairpin-helix motif FKM99_14390 PF10576 Iron-sulfur binding domain of endonuclease III FKM99_14390 PF00730 HhH-GPD superfamily base excision DNA repair protein FKM99_14395 PF02508 Rnf-Nqr subunit, membrane protein FKM99_14400 PF04205 FMN-binding domain FKM99_14405 PF03116 NQR2, RnfD, RnfE family FKM99_14410 PF13375 RnfC Barrel sandwich hybrid domain FKM99_14410 PF10531 SLBB domain FKM99_14410 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FKM99_14410 PF12838 4Fe-4S dicluster domain FKM99_14415 PF04060 Putative Fe-S cluster FKM99_14420 PF02508 Rnf-Nqr subunit, membrane protein FKM99_14435 PF12344 Ultra-violet resistance protein B FKM99_14435 PF04851 Type III restriction enzyme, res subunit FKM99_14435 PF02151 UvrB/uvrC motif FKM99_14435 PF17757 UvrB interaction domain FKM99_14435 PF00271 Helicase conserved C-terminal domain FKM99_14440 PF00158 Sigma-54 interaction domain FKM99_14440 PF00072 Response regulator receiver domain FKM99_14440 PF02954 Bacterial regulatory protein, Fis family FKM99_14445 PF01627 Hpt domain FKM99_14450 PF01933 Uncharacterised protein family UPF0052 FKM99_14455 PF06463 Molybdenum Cofactor Synthesis C FKM99_14455 PF04055 Radical SAM superfamily FKM99_14460 PF00994 Probable molybdopterin binding domain FKM99_14465 PF01967 MoaC family FKM99_14470 PF02597 ThiS family FKM99_14475 PF02391 MoaE protein FKM99_14480 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FKM99_14485 PF00528 Binding-protein-dependent transport system inner membrane component FKM99_14490 PF00528 Binding-protein-dependent transport system inner membrane component FKM99_14490 PF12911 N-terminal TM domain of oligopeptide transport permease C FKM99_14495 PF00005 ABC transporter FKM99_14495 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FKM99_14500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FKM99_14500 PF00005 ABC transporter FKM99_14505 PF13409 Glutathione S-transferase, N-terminal domain FKM99_14515 PF13194 Domain of unknown function (DUF4010) FKM99_14520 PF01515 Phosphate acetyl/butaryl transferase FKM99_14520 PF07085 DRTGG domain FKM99_14525 PF00871 Acetokinase family FKM99_14530 PF04217 Protein of unknown function, DUF412 FKM99_14540 PF02653 Branched-chain amino acid transport system / permease component FKM99_14545 PF00005 ABC transporter FKM99_14550 PF02903 Alpha amylase, N-terminal ig-like domain FKM99_14550 PF00128 Alpha amylase, catalytic domain FKM99_14555 PF00990 Diguanylate cyclase, GGDEF domain FKM99_14560 PF01207 Dihydrouridine synthase (Dus) FKM99_14565 PF02810 SEC-C motif FKM99_14565 PF03695 Uncharacterised protein family (UPF0149) FKM99_14570 PF02600 Disulfide bond formation protein DsbB FKM99_14575 PF06450 Bacterial Na+/H+ antiporter B (NhaB) FKM99_14580 PF00392 Bacterial regulatory proteins, gntR family FKM99_14580 PF07840 FadR C-terminal domain FKM99_14590 PF09334 tRNA synthetases class I (M) FKM99_14590 PF01588 Putative tRNA binding domain FKM99_14595 PF10609 NUBPL iron-transfer P-loop NTPase FKM99_14600 PF00485 Phosphoribulokinase / Uridine kinase family FKM99_14610 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP FKM99_14610 PF12557 Cob(I)alamin adenosyltransferase N terminal FKM99_14615 PF01451 Low molecular weight phosphotyrosine protein phosphatase FKM99_14620 PF00916 Sulfate permease family FKM99_14620 PF01740 STAS domain FKM99_14630 PF00575 S1 RNA binding domain FKM99_14630 PF12111 Polyribonucleotide phosphorylase C terminal FKM99_14630 PF10150 Ribonuclease E/G family FKM99_14645 PF01479 S4 domain FKM99_14645 PF00849 RNA pseudouridylate synthase FKM99_14650 PF02545 Maf-like protein FKM99_14655 PF02620 Large ribosomal RNA subunit accumulation protein YceD FKM99_14660 PF01783 Ribosomal L32p protein family FKM99_14665 PF02504 Fatty acid synthesis protein FKM99_14670 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FKM99_14670 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FKM99_14675 PF00698 Acyl transferase domain FKM99_14685 PF00550 Phosphopantetheine attachment site FKM99_14690 PF02801 Beta-ketoacyl synthase, C-terminal domain FKM99_14690 PF00109 Beta-ketoacyl synthase, N-terminal domain FKM99_14695 PF01063 Amino-transferase class IV FKM99_14700 PF02618 YceG-like family FKM99_14705 PF02223 Thymidylate kinase FKM99_14710 PF09115 DNA polymerase III, delta subunit, C terminal FKM99_14715 PF01026 TatD related DNase FKM99_14720 PF02378 Phosphotransferase system, EIIC FKM99_14720 PF00367 phosphotransferase system, EIIB FKM99_14740 PF00209 Sodium:neurotransmitter symporter family FKM99_14755 PF01734 Patatin-like phospholipase FKM99_14760 PF00224 Pyruvate kinase, barrel domain FKM99_14760 PF02887 Pyruvate kinase, alpha/beta domain FKM99_14765 PF00480 ROK family FKM99_14770 PF00072 Response regulator receiver domain FKM99_14770 PF01584 CheW-like domain FKM99_14775 PF01336 OB-fold nucleic acid binding domain FKM99_14775 PF02811 PHP domain FKM99_14775 PF14579 Helix-hairpin-helix motif FKM99_14775 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FKM99_14775 PF07733 Bacterial DNA polymerase III alpha NTPase domain FKM99_14790 PF00106 short chain dehydrogenase FKM99_14795 PF01343 Peptidase family S49 FKM99_14795 PF08496 Peptidase family S49 N-terminal FKM99_14800 PF02224 Cytidylate kinase FKM99_14805 PF00575 S1 RNA binding domain FKM99_14810 PF00216 Bacterial DNA-binding protein FKM99_14815 PF06305 Lipopolysaccharide assembly protein A domain FKM99_14820 PF18073 Rubredoxin metal binding domain FKM99_14825 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FKM99_14830 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FKM99_14840 PF01370 NAD dependent epimerase/dehydratase family FKM99_14845 PF00535 Glycosyl transferase family 2 FKM99_14855 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase FKM99_14865 PF02470 MlaD protein FKM99_14870 PF04403 Paraquat-inducible protein A FKM99_14880 PF00034 Cytochrome c FKM99_14885 PF00384 Molybdopterin oxidoreductase FKM99_14885 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FKM99_14885 PF01568 Molydopterin dinucleotide binding domain FKM99_14890 PF03916 Polysulphide reductase, NrfD FKM99_14895 PF13247 4Fe-4S dicluster domain FKM99_14900 PF00512 His Kinase A (phospho-acceptor) domain FKM99_14900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_14905 PF00196 Bacterial regulatory proteins, luxR family FKM99_14905 PF00072 Response regulator receiver domain FKM99_14910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_14910 PF03466 LysR substrate binding domain FKM99_14920 PF02683 Cytochrome C biogenesis protein transmembrane region FKM99_14920 PF11412 Disulphide bond corrector protein DsbC FKM99_14925 PF00085 Thioredoxin FKM99_14940 PF01938 TRAM domain FKM99_14940 PF05958 tRNA (Uracil-5-)-methyltransferase FKM99_14955 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FKM99_14965 PF02687 FtsX-like permease family FKM99_14965 PF12704 MacB-like periplasmic core domain FKM99_14965 PF00005 ABC transporter FKM99_14970 PF12704 MacB-like periplasmic core domain FKM99_14970 PF02687 FtsX-like permease family FKM99_14970 PF00005 ABC transporter FKM99_14975 PF00005 ABC transporter FKM99_14975 PF02687 FtsX-like permease family FKM99_14975 PF12704 MacB-like periplasmic core domain FKM99_14980 PF00857 Isochorismatase family FKM99_14985 PF02311 AraC-like ligand binding domain FKM99_14985 PF12833 Helix-turn-helix domain FKM99_14995 PF08267 Cobalamin-independent synthase, N-terminal domain FKM99_14995 PF01717 Cobalamin-independent synthase, Catalytic domain FKM99_15005 PF00529 HlyD membrane-fusion protein of T1SS FKM99_15005 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FKM99_15010 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_15010 PF03466 LysR substrate binding domain FKM99_15030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_15030 PF00672 HAMP domain FKM99_15030 PF00512 His Kinase A (phospho-acceptor) domain FKM99_15035 PF00072 Response regulator receiver domain FKM99_15035 PF00486 Transcriptional regulatory protein, C terminal FKM99_15045 PF00672 HAMP domain FKM99_15045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FKM99_15050 PF08497 Radical SAM N-terminal FKM99_15050 PF04055 Radical SAM superfamily FKM99_15050 PF11842 Domain of unknown function (DUF3362) FKM99_15055 PF00360 Phytochrome region FKM99_15055 PF00990 Diguanylate cyclase, GGDEF domain FKM99_15055 PF01590 GAF domain FKM99_15055 PF00563 EAL domain FKM99_15070 PF03466 LysR substrate binding domain FKM99_15070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_15080 PF01717 Cobalamin-independent synthase, Catalytic domain FKM99_15080 PF08267 Cobalamin-independent synthase, N-terminal domain FKM99_15090 PF03795 YCII-related domain FKM99_15095 PF03061 Thioesterase superfamily FKM99_15100 PF04279 Intracellular septation protein A FKM99_15110 PF00072 Response regulator receiver domain FKM99_15110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_15115 PF17327 Acyl homoserine lactone synthase FKM99_15120 PF00375 Sodium:dicarboxylate symporter family FKM99_15130 PF00501 AMP-binding enzyme FKM99_15130 PF13193 AMP-binding enzyme C-terminal domain FKM99_15135 PF13545 Crp-like helix-turn-helix domain FKM99_15135 PF00027 Cyclic nucleotide-binding domain FKM99_15145 PF00290 Tryptophan synthase alpha chain FKM99_15150 PF00291 Pyridoxal-phosphate dependent enzyme FKM99_15155 PF00218 Indole-3-glycerol phosphate synthase FKM99_15155 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FKM99_15160 PF02885 Glycosyl transferase family, helical bundle domain FKM99_15160 PF00591 Glycosyl transferase family, a/b domain FKM99_15165 PF00117 Glutamine amidotransferase class-I FKM99_15170 PF04715 Anthranilate synthase component I, N terminal region FKM99_15170 PF00425 chorismate binding enzyme FKM99_15175 PF08056 Tryptophan operon leader peptide FKM99_15180 PF02811 PHP domain FKM99_15185 PF01300 Telomere recombination FKM99_15195 PF00849 RNA pseudouridylate synthase FKM99_15195 PF01479 S4 domain FKM99_15205 PF04269 Protein of unknown function, DUF440 FKM99_15210 PF08207 Elongation factor P (EF-P) KOW-like domain FKM99_15210 PF01132 Elongation factor P (EF-P) OB domain FKM99_15210 PF09285 Elongation factor P, C-terminal FKM99_15220 PF00136 DNA polymerase family B FKM99_15220 PF03104 DNA polymerase family B, exonuclease domain FKM99_15225 PF00072 Response regulator receiver domain FKM99_15225 PF00196 Bacterial regulatory proteins, luxR family FKM99_15230 PF08459 UvrC Helix-hairpin-helix N-terminal FKM99_15230 PF02151 UvrB/uvrC motif FKM99_15230 PF01541 GIY-YIG catalytic domain FKM99_15235 PF01066 CDP-alcohol phosphatidyltransferase FKM99_15260 PF00202 Aminotransferase class-III FKM99_15265 PF16653 Saccharopine dehydrogenase C-terminal domain FKM99_15265 PF03435 Saccharopine dehydrogenase NADP binding domain FKM99_15270 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FKM99_15285 PF00994 Probable molybdopterin binding domain FKM99_15295 PF00268 Ribonucleotide reductase, small chain FKM99_15300 PF03477 ATP cone domain FKM99_15300 PF00317 Ribonucleotide reductase, all-alpha domain FKM99_15300 PF02867 Ribonucleotide reductase, barrel domain FKM99_15310 PF03989 DNA gyrase C-terminal domain, beta-propeller FKM99_15310 PF00521 DNA gyrase/topoisomerase IV, subunit A FKM99_15325 PF02335 Cytochrome c552 FKM99_15335 PF13247 4Fe-4S dicluster domain FKM99_15340 PF03916 Polysulphide reductase, NrfD FKM99_15345 PF01578 Cytochrome C assembly protein FKM99_15345 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FKM99_15350 PF08534 Redoxin FKM99_15355 PF03918 Cytochrome C biogenesis protein FKM99_15365 PF00925 GTP cyclohydrolase II FKM99_15390 PF03734 L,D-transpeptidase catalytic domain FKM99_15390 PF01471 Putative peptidoglycan binding domain FKM99_15395 PF05951 Bacterial protein of unknown function (DUF882) FKM99_15400 PF00753 Metallo-beta-lactamase superfamily FKM99_15415 PF03480 Bacterial extracellular solute-binding protein, family 7 FKM99_15425 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FKM99_15430 PF07730 Histidine kinase FKM99_15430 PF17200 Single Cache domain 2 FKM99_15435 PF00072 Response regulator receiver domain FKM99_15435 PF00196 Bacterial regulatory proteins, luxR family FKM99_15440 PF01047 MarR family FKM99_15445 PF02028 BCCT, betaine/carnitine/choline family transporter FKM99_15450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FKM99_15450 PF00672 HAMP domain FKM99_15470 PF00155 Aminotransferase class I and II FKM99_15495 PF00392 Bacterial regulatory proteins, gntR family FKM99_15495 PF00155 Aminotransferase class I and II FKM99_15505 PF01336 OB-fold nucleic acid binding domain FKM99_15505 PF00152 tRNA synthetases class II (D, K and N) FKM99_15510 PF00672 HAMP domain FKM99_15510 PF12729 Four helix bundle sensory module for signal transduction FKM99_15510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FKM99_15515 PF01242 6-pyruvoyl tetrahydropterin synthase FKM99_15525 PF00563 EAL domain FKM99_15525 PF04940 Sensors of blue-light using FAD FKM99_15530 PF03315 Serine dehydratase beta chain FKM99_15530 PF03313 Serine dehydratase alpha chain FKM99_15535 PF03222 Tryptophan/tyrosine permease family FKM99_15540 PF00293 NUDIX domain FKM99_15550 PF00512 His Kinase A (phospho-acceptor) domain FKM99_15550 PF09308 LuxQ, periplasmic FKM99_15550 PF00072 Response regulator receiver domain FKM99_15550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_15555 PF04715 Anthranilate synthase component I, N terminal region FKM99_15555 PF00425 chorismate binding enzyme FKM99_15575 PF04317 YcjX-like family, DUF463 FKM99_15580 PF05128 Domain of unknown function (DUF697) FKM99_15585 PF00158 Sigma-54 interaction domain FKM99_15585 PF18024 Helix-turn-helix domain FKM99_15590 PF13302 Acetyltransferase (GNAT) domain FKM99_15605 PF00589 Phage integrase family FKM99_15605 PF13495 Phage integrase, N-terminal SAM-like domain FKM99_15950 PF01906 Putative heavy-metal-binding FKM99_15975 PF01790 Prolipoprotein diacylglyceryl transferase FKM99_16015 PF01695 IstB-like ATP binding protein FKM99_16020 PF00665 Integrase core domain FKM99_16155 PF00857 Isochorismatase family FKM99_16245 PF05016 ParE toxin of type II toxin-antitoxin system, parDE FKM99_16305 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system FKM99_16310 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system FKM99_16445 PF00665 Integrase core domain FKM99_16450 PF01695 IstB-like ATP binding protein FKM99_16540 PF13344 Haloacid dehalogenase-like hydrolase FKM99_16540 PF00293 NUDIX domain FKM99_16600 PF13344 Haloacid dehalogenase-like hydrolase FKM99_16600 PF00293 NUDIX domain FKM99_16645 PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system FKM99_16650 PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system FKM99_16660 PF11008 Protein of unknown function (DUF2846) FKM99_16845 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FKM99_16900 PF13533 Biotin-lipoyl like FKM99_16915 PF08543 Phosphomethylpyrimidine kinase FKM99_16920 PF03466 LysR substrate binding domain FKM99_16920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_16940 PF00300 Histidine phosphatase superfamily (branch 1) FKM99_16955 PF00939 Sodium:sulfate symporter transmembrane region FKM99_16960 PF00497 Bacterial extracellular solute-binding proteins, family 3 FKM99_16960 PF00512 His Kinase A (phospho-acceptor) domain FKM99_16960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_16965 PF02954 Bacterial regulatory protein, Fis family FKM99_16965 PF00072 Response regulator receiver domain FKM99_16965 PF00158 Sigma-54 interaction domain FKM99_16970 PF00563 EAL domain FKM99_16970 PF00990 Diguanylate cyclase, GGDEF domain FKM99_16970 PF03707 Bacterial signalling protein N terminal repeat FKM99_16975 PF11871 Domain of unknown function (DUF3391) FKM99_16975 PF01966 HD domain FKM99_16980 PF01810 LysE type translocator FKM99_16985 PF11230 Protein of unknown function (DUF3029) FKM99_16990 PF04055 Radical SAM superfamily FKM99_17000 PF03741 Integral membrane protein TerC family FKM99_17010 PF01966 HD domain FKM99_17020 PF00465 Iron-containing alcohol dehydrogenase FKM99_17025 PF03222 Tryptophan/tyrosine permease family FKM99_17050 PF00664 ABC transporter transmembrane region FKM99_17050 PF00005 ABC transporter FKM99_17055 PF00664 ABC transporter transmembrane region FKM99_17055 PF00005 ABC transporter FKM99_17085 PF00012 Hsp70 protein FKM99_17090 PF00012 Hsp70 protein FKM99_17100 PF00990 Diguanylate cyclase, GGDEF domain FKM99_17100 PF17151 Periplasmic sensor domain FKM99_17130 PF01568 Molydopterin dinucleotide binding domain FKM99_17130 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FKM99_17130 PF00384 Molybdopterin oxidoreductase FKM99_17135 PF13247 4Fe-4S dicluster domain FKM99_17135 PF12800 4Fe-4S binding domain FKM99_17140 PF04976 DMSO reductase anchor subunit (DmsC) FKM99_17145 PF02613 Nitrate reductase delta subunit FKM99_17155 PF02525 Flavodoxin-like fold FKM99_17160 PF04408 Helicase associated domain (HA2) FKM99_17160 PF11898 Domain of unknown function (DUF3418) FKM99_17160 PF00271 Helicase conserved C-terminal domain FKM99_17160 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold FKM99_17160 PF00270 DEAD/DEAH box helicase FKM99_17175 PF02028 BCCT, betaine/carnitine/choline family transporter FKM99_17185 PF02397 Bacterial sugar transferase FKM99_17190 PF00535 Glycosyl transferase family 2 FKM99_17195 PF00534 Glycosyl transferases group 1 FKM99_17195 PF13439 Glycosyltransferase Family 4 FKM99_17230 PF13439 Glycosyltransferase Family 4 FKM99_17230 PF00534 Glycosyl transferases group 1 FKM99_17235 PF00534 Glycosyl transferases group 1 FKM99_17235 PF13439 Glycosyltransferase Family 4 FKM99_17240 PF02954 Bacterial regulatory protein, Fis family FKM99_17240 PF00158 Sigma-54 interaction domain FKM99_17240 PF00072 Response regulator receiver domain FKM99_17260 PF10531 SLBB domain FKM99_17260 PF02563 Polysaccharide biosynthesis/export protein FKM99_17270 PF01740 STAS domain FKM99_17275 PF14743 DNA ligase OB-like domain FKM99_17275 PF01068 ATP dependent DNA ligase domain FKM99_17285 PF01554 MatE FKM99_17290 PF00677 Lumazine binding domain FKM99_17305 PF00072 Response regulator receiver domain FKM99_17305 PF01339 CheB methylesterase FKM99_17310 PF00990 Diguanylate cyclase, GGDEF domain FKM99_17310 PF05230 MASE2 domain FKM99_17320 PF00877 NlpC/P60 family FKM99_17325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FKM99_17325 PF00672 HAMP domain FKM99_17325 PF17202 Single cache domain 3 FKM99_17365 PF00480 ROK family FKM99_17375 PF00994 Probable molybdopterin binding domain FKM99_17375 PF03454 MoeA C-terminal region (domain IV) FKM99_17375 PF03453 MoeA N-terminal region (domain I and II) FKM99_17380 PF12804 MobA-like NTP transferase domain FKM99_17385 PF08402 TOBE domain FKM99_17385 PF00005 ABC transporter FKM99_17390 PF00528 Binding-protein-dependent transport system inner membrane component FKM99_17395 PF12849 PBP superfamily domain FKM99_17405 PF00072 Response regulator receiver domain FKM99_17405 PF00158 Sigma-54 interaction domain FKM99_17405 PF02954 Bacterial regulatory protein, Fis family FKM99_17410 PF00512 His Kinase A (phospho-acceptor) domain FKM99_17410 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_17420 PF00005 ABC transporter FKM99_17420 PF12848 ABC transporter FKM99_17425 PF02634 FdhD/NarQ family FKM99_17450 PF02613 Nitrate reductase delta subunit FKM99_17460 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FKM99_17460 PF00384 Molybdopterin oxidoreductase FKM99_17460 PF01568 Molydopterin dinucleotide binding domain FKM99_17465 PF13247 4Fe-4S dicluster domain FKM99_17505 PF00909 Ammonium Transporter Family FKM99_17515 PF02146 Sir2 family FKM99_17520 PF13416 Bacterial extracellular solute-binding protein FKM99_17525 PF13416 Bacterial extracellular solute-binding protein FKM99_17530 PF00528 Binding-protein-dependent transport system inner membrane component FKM99_17535 PF00528 Binding-protein-dependent transport system inner membrane component FKM99_17540 PF00005 ABC transporter FKM99_17540 PF08402 TOBE domain FKM99_17560 PF01171 PP-loop family FKM99_17570 PF00582 Universal stress protein family FKM99_17575 PF13545 Crp-like helix-turn-helix domain FKM99_17575 PF00027 Cyclic nucleotide-binding domain FKM99_17590 PF00403 Heavy-metal-associated domain FKM99_17600 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP FKM99_17600 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FKM99_17615 PF00115 Cytochrome C and Quinol oxidase polypeptide I FKM99_17630 PF00072 Response regulator receiver domain FKM99_17630 PF09308 LuxQ, periplasmic FKM99_17630 PF00512 His Kinase A (phospho-acceptor) domain FKM99_17630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_17650 PF06303 MatP N-terminal domain FKM99_17650 PF17414 MatP C-terminal ribbon-helix-helix domain FKM99_17655 PF13654 AAA domain FKM99_17655 PF05362 Lon protease (S16) C-terminal proteolytic domain FKM99_17660 PF07977 FabA-like domain FKM99_17665 PF04957 Ribosome modulation factor FKM99_17685 PF10672 S-adenosylmethionine-dependent methyltransferase FKM99_17685 PF02926 THUMP domain FKM99_17685 PF01170 Putative RNA methylase family UPF0020 FKM99_17695 PF07126 Cell-division protein ZapC FKM99_17700 PF01180 Dihydroorotate dehydrogenase FKM99_17705 PF05088 Bacterial NAD-glutamate dehydrogenase FKM99_17715 PF01433 Peptidase family M1 domain FKM99_17715 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FKM99_17715 PF11940 Domain of unknown function (DUF3458) Ig-like fold FKM99_17725 PF11818 C-terminal domain of tail specific protease (DUF3340) FKM99_17725 PF03572 Peptidase family S41 FKM99_17725 PF00595 PDZ domain FKM99_17725 PF17804 Tail specific protease N-terminal domain FKM99_17730 PF17516 ProQ C-terminal domain FKM99_17730 PF04352 ProQ/FINO family FKM99_17735 PF13185 GAF domain FKM99_17740 PF00005 ABC transporter FKM99_17740 PF00664 ABC transporter transmembrane region FKM99_17745 PF04403 Paraquat-inducible protein A FKM99_17750 PF02470 MlaD protein FKM99_17760 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF FKM99_17760 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF FKM99_17760 PF01189 16S rRNA methyltransferase RsmB/F FKM99_17780 PF00793 DAHP synthetase I family FKM99_17785 PF04461 Protein of unknown function (DUF520) FKM99_17795 PF14824 Sirohaem biosynthesis protein central FKM99_17795 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FKM99_17795 PF10414 Sirohaem synthase dimerisation region FKM99_17805 PF00497 Bacterial extracellular solute-binding proteins, family 3 FKM99_17810 PF00528 Binding-protein-dependent transport system inner membrane component FKM99_17815 PF00528 Binding-protein-dependent transport system inner membrane component FKM99_17820 PF00005 ABC transporter FKM99_17825 PF01027 Inhibitor of apoptosis-promoting Bax1 FKM99_17835 PF04358 DsrC like protein FKM99_17840 PF00708 Acylphosphatase FKM99_17845 PF02743 Cache domain FKM99_17845 PF00672 HAMP domain FKM99_17845 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FKM99_17850 PF10672 S-adenosylmethionine-dependent methyltransferase FKM99_17850 PF17785 PUA-like domain FKM99_17865 PF00691 OmpA family FKM99_17865 PF05736 OprF membrane domain FKM99_17880 PF05736 OprF membrane domain FKM99_17880 PF00691 OmpA family FKM99_17890 PF00990 Diguanylate cyclase, GGDEF domain FKM99_17890 PF17158 Membrane-associated sensor, integral membrane domain FKM99_17895 PF06508 Queuosine biosynthesis protein QueC FKM99_17900 PF04055 Radical SAM superfamily FKM99_17915 PF00089 Trypsin FKM99_17925 PF00501 AMP-binding enzyme FKM99_17925 PF13193 AMP-binding enzyme C-terminal domain FKM99_17925 PF16177 Acetyl-coenzyme A synthetase N-terminus FKM99_17930 PF04303 PrpF protein FKM99_17935 PF00694 Aconitase C-terminal domain FKM99_17935 PF00330 Aconitase family (aconitate hydratase) FKM99_17940 PF00285 Citrate synthase, C-terminal domain FKM99_17970 PF01970 Tripartite tricarboxylate transporter TctA family FKM99_17975 PF01925 Sulfite exporter TauE/SafE FKM99_17985 PF05844 YopD protein FKM99_17995 PF07720 Tetratricopeptide repeat FKM99_18000 PF04792 V antigen (LcrV) protein FKM99_18005 PF07216 LcrG protein FKM99_18010 PF09621 Type III secretion system regulator (LcrR) FKM99_18015 PF00771 FHIPEP family FKM99_18035 PF09059 TyeA FKM99_18040 PF07201 HrpJ-like domain FKM99_18045 PF18269 T3SS EscN ATPase C-terminal domain FKM99_18045 PF02874 ATP synthase alpha/beta family, beta-barrel domain FKM99_18045 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FKM99_18060 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FKM99_18065 PF00813 FliP family FKM99_18070 PF01313 Bacterial export proteins, family 3 FKM99_18075 PF01311 Bacterial export proteins, family 1 FKM99_18080 PF01312 FlhB HrpN YscU SpaS Family FKM99_18085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_18085 PF03466 LysR substrate binding domain FKM99_18090 PF12146 Serine aminopeptidase, S33 FKM99_18095 PF12146 Serine aminopeptidase, S33 FKM99_18135 PF02661 Fic/DOC family FKM99_18145 PF02108 Flagellar assembly protein FliH FKM99_18155 PF01514 Secretory protein of YscJ/FliF family FKM99_18160 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI FKM99_18170 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) FKM99_18175 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF FKM99_18185 PF16697 Inner membrane component of T3SS, cytoplasmic domain FKM99_18185 PF16693 Inner membrane component of T3SS, periplasmic domain FKM99_18205 PF12833 Helix-turn-helix domain FKM99_18225 PF00171 Aldehyde dehydrogenase family FKM99_18230 PF02954 Bacterial regulatory protein, Fis family FKM99_18230 PF01590 GAF domain FKM99_18230 PF00158 Sigma-54 interaction domain FKM99_18255 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FKM99_18255 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FKM99_18260 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FKM99_18265 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FKM99_18265 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FKM99_18270 PF12431 Transcriptional regulator FKM99_18270 PF00072 Response regulator receiver domain FKM99_18275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_18275 PF00989 PAS fold FKM99_18275 PF17203 Single cache domain 3 FKM99_18275 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain FKM99_18290 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FKM99_18305 PF00034 Cytochrome c FKM99_18305 PF03150 Di-haem cytochrome c peroxidase FKM99_18320 PF13840 ACT domain FKM99_18320 PF00696 Amino acid kinase family FKM99_18325 PF06339 Ectoine synthase FKM99_18330 PF00202 Aminotransferase class-III FKM99_18335 PF00583 Acetyltransferase (GNAT) family FKM99_18340 PF02028 BCCT, betaine/carnitine/choline family transporter FKM99_18355 PF00571 CBS domain FKM99_18355 PF00005 ABC transporter FKM99_18360 PF00528 Binding-protein-dependent transport system inner membrane component FKM99_18365 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FKM99_18370 PF01610 Transposase FKM99_18370 PF13542 Helix-turn-helix domain of transposase family ISL3 FKM99_18370 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 FKM99_18380 PF00501 AMP-binding enzyme FKM99_18400 PF00486 Transcriptional regulatory protein, C terminal FKM99_18400 PF00072 Response regulator receiver domain FKM99_18405 PF08521 Two-component sensor kinase N-terminal FKM99_18405 PF00512 His Kinase A (phospho-acceptor) domain FKM99_18405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_18410 PF00884 Sulfatase FKM99_18435 PF01235 Sodium:alanine symporter family FKM99_18445 PF01810 LysE type translocator FKM99_18460 PF07804 HipA-like C-terminal domain FKM99_18460 PF13657 HipA N-terminal domain FKM99_18470 PF02463 RecF/RecN/SMC N terminal domain FKM99_18475 PF01695 IstB-like ATP binding protein FKM99_18480 PF00665 Integrase core domain FKM99_18525 PF00288 GHMP kinases N terminal domain FKM99_18525 PF08544 GHMP kinases C terminal FKM99_18525 PF10509 Galactokinase galactose-binding signature FKM99_18530 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain FKM99_18530 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain FKM99_18535 PF16363 GDP-mannose 4,6 dehydratase FKM99_18540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FKM99_18540 PF00672 HAMP domain FKM99_18540 PF12729 Four helix bundle sensory module for signal transduction FKM99_18545 PF02264 LamB porin FKM99_18550 PF08533 Beta-galactosidase C-terminal domain FKM99_18550 PF02449 Beta-galactosidase FKM99_18550 PF08532 Beta-galactosidase trimerisation domain FKM99_18555 PF07745 Glycosyl hydrolase family 53 FKM99_18560 PF00528 Binding-protein-dependent transport system inner membrane component FKM99_18565 PF00528 Binding-protein-dependent transport system inner membrane component FKM99_18570 PF13416 Bacterial extracellular solute-binding protein FKM99_18575 PF00005 ABC transporter FKM99_18575 PF17912 MalK OB fold domain FKM99_18585 PF07745 Glycosyl hydrolase family 53 FKM99_18650 PF13408 Recombinase zinc beta ribbon domain FKM99_18650 PF07508 Recombinase FKM99_18650 PF00239 Resolvase, N terminal domain FKM99_18660 PF03279 Bacterial lipid A biosynthesis acyltransferase FKM99_18670 PF13520 Amino acid permease FKM99_18685 PF04204 Homoserine O-succinyltransferase FKM99_18700 PF00563 EAL domain FKM99_18700 PF00990 Diguanylate cyclase, GGDEF domain FKM99_18700 PF03707 Bacterial signalling protein N terminal repeat FKM99_18705 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FKM99_18705 PF00512 His Kinase A (phospho-acceptor) domain FKM99_18705 PF01627 Hpt domain FKM99_18705 PF00072 Response regulator receiver domain FKM99_18705 PF00672 HAMP domain FKM99_18705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_18720 PF00132 Bacterial transferase hexapeptide (six repeats) FKM99_18720 PF12464 Maltose acetyltransferase FKM99_18730 PF01928 CYTH domain FKM99_18740 PF04237 YjbR FKM99_18745 PF01047 MarR family FKM99_18755 PF12833 Helix-turn-helix domain FKM99_18760 PF02272 DHHA1 domain FKM99_18760 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FKM99_18760 PF01411 tRNA synthetases class II (A) FKM99_18775 PF00563 EAL domain FKM99_18775 PF00196 Bacterial regulatory proteins, luxR family FKM99_18785 PF01368 DHH family FKM99_18785 PF02833 DHHA2 domain FKM99_18790 PF00202 Aminotransferase class-III FKM99_18795 PF00171 Aldehyde dehydrogenase family FKM99_18800 PF04371 Porphyromonas-type peptidyl-arginine deiminase FKM99_18805 PF00795 Carbon-nitrogen hydrolase FKM99_18810 PF01266 FAD dependent oxidoreductase FKM99_18815 PF00171 Aldehyde dehydrogenase family FKM99_18820 PF01381 Helix-turn-helix FKM99_18820 PF07883 Cupin domain FKM99_18825 PF07722 Peptidase C26 FKM99_18835 PF00120 Glutamine synthetase, catalytic domain FKM99_18840 PF03553 Na+/H+ antiporter family FKM99_18865 PF01810 LysE type translocator FKM99_18910 PF02798 Glutathione S-transferase, N-terminal domain FKM99_18910 PF14497 Glutathione S-transferase, C-terminal domain FKM99_18920 PF04209 homogentisate 1,2-dioxygenase FKM99_18925 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FKM99_18935 PF01546 Peptidase family M20/M25/M40 FKM99_18935 PF07687 Peptidase dimerisation domain FKM99_18940 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FKM99_18945 PF00528 Binding-protein-dependent transport system inner membrane component FKM99_18950 PF12911 N-terminal TM domain of oligopeptide transport permease C FKM99_18950 PF00528 Binding-protein-dependent transport system inner membrane component FKM99_18955 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FKM99_18955 PF00005 ABC transporter FKM99_18960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FKM99_18960 PF00005 ABC transporter FKM99_18975 PF01752 Collagenase FKM99_18975 PF08453 Peptidase family M9 N-terminal FKM99_18990 PF00528 Binding-protein-dependent transport system inner membrane component FKM99_18995 PF00528 Binding-protein-dependent transport system inner membrane component FKM99_19000 PF08402 TOBE domain FKM99_19000 PF00005 ABC transporter FKM99_19005 PF00701 Dihydrodipicolinate synthetase family FKM99_19010 PF02423 Ornithine cyclodeaminase/mu-crystallin family FKM99_19030 PF05544 Proline racemase FKM99_19035 PF00171 Aldehyde dehydrogenase family FKM99_19040 PF00392 Bacterial regulatory proteins, gntR family FKM99_19060 PF05971 RNA methyltransferase FKM99_19065 PF01863 Protein of unknown function DUF45 FKM99_19070 PF04991 LicD family FKM99_19075 PF16363 GDP-mannose 4,6 dehydratase FKM99_19080 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FKM99_19100 PF03466 LysR substrate binding domain FKM99_19100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_19120 PF00005 ABC transporter FKM99_19125 PF01032 FecCD transport family FKM99_19130 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family FKM99_19145 PF00300 Histidine phosphatase superfamily (branch 1) FKM99_19150 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase FKM99_19155 PF02654 Cobalamin-5-phosphate synthase FKM99_19160 PF02277 Phosphoribosyltransferase FKM99_19165 PF13460 NAD(P)H-binding FKM99_19175 PF00929 Exonuclease FKM99_19175 PF08411 Exonuclease C-terminal FKM99_19180 PF03788 LrgA family FKM99_19185 PF04172 LrgB-like family FKM99_19190 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FKM99_19190 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region FKM99_19195 PF02222 ATP-grasp domain FKM99_19200 PF05724 Thiopurine S-methyltransferase (TPMT) FKM99_19210 PF00216 Bacterial DNA-binding protein FKM99_19225 PF03484 tRNA synthetase B5 domain FKM99_19225 PF03483 B3/4 domain FKM99_19225 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FKM99_19225 PF03147 Ferredoxin-fold anticodon binding domain FKM99_19225 PF01588 Putative tRNA binding domain FKM99_19230 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FKM99_19230 PF01409 tRNA synthetases class II core domain (F) FKM99_19235 PF17158 Membrane-associated sensor, integral membrane domain FKM99_19235 PF00990 Diguanylate cyclase, GGDEF domain FKM99_19265 PF01906 Putative heavy-metal-binding FKM99_19270 PF00453 Ribosomal protein L20 FKM99_19275 PF01632 Ribosomal protein L35 FKM99_19280 PF05198 Translation initiation factor IF-3, N-terminal domain FKM99_19280 PF00707 Translation initiation factor IF-3, C-terminal domain FKM99_19285 PF03129 Anticodon binding domain FKM99_19285 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FKM99_19285 PF02824 TGS domain FKM99_19285 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FKM99_19300 PF07702 UTRA domain FKM99_19300 PF00392 Bacterial regulatory proteins, gntR family FKM99_19305 PF01979 Amidohydrolase family FKM99_19310 PF00491 Arginase family FKM99_19315 PF01175 Urocanase Rossmann-like domain FKM99_19315 PF17392 Urocanase C-terminal domain FKM99_19315 PF17391 Urocanase N-terminal domain FKM99_19320 PF00221 Aromatic amino acid lyase FKM99_19330 PF04191 Phospholipid methyltransferase FKM99_19335 PF13183 4Fe-4S dicluster domain FKM99_19335 PF01565 FAD binding domain FKM99_19335 PF02913 FAD linked oxidases, C-terminal domain FKM99_19350 PF05736 OprF membrane domain FKM99_19350 PF00691 OmpA family FKM99_19370 PF01259 SAICAR synthetase FKM99_19375 PF09423 PhoD-like phosphatase FKM99_19375 PF16655 PhoD-like phosphatase, N-terminal domain FKM99_19385 PF02253 Phospholipase A1 FKM99_19390 PF08482 ATP-dependent helicase C-terminal FKM99_19390 PF00271 Helicase conserved C-terminal domain FKM99_19390 PF04408 Helicase associated domain (HA2) FKM99_19390 PF00270 DEAD/DEAH box helicase FKM99_19395 PF00390 Malic enzyme, N-terminal domain FKM99_19395 PF03949 Malic enzyme, NAD binding domain FKM99_19400 PF02698 DUF218 domain FKM99_19405 PF00939 Sodium:sulfate symporter transmembrane region FKM99_19410 PF00072 Response regulator receiver domain FKM99_19410 PF00990 Diguanylate cyclase, GGDEF domain FKM99_19420 PF00266 Aminotransferase class-V FKM99_19430 PF07992 Pyridine nucleotide-disulphide oxidoreductase FKM99_19435 PF00664 ABC transporter transmembrane region FKM99_19435 PF00005 ABC transporter FKM99_19440 PF00664 ABC transporter transmembrane region FKM99_19440 PF00005 ABC transporter FKM99_19445 PF00291 Pyridoxal-phosphate dependent enzyme FKM99_19450 PF00266 Aminotransferase class-V FKM99_19460 PF00512 His Kinase A (phospho-acceptor) domain FKM99_19460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_19460 PF00497 Bacterial extracellular solute-binding proteins, family 3 FKM99_19475 PF04994 TfoX C-terminal domain FKM99_19475 PF04993 TfoX N-terminal domain FKM99_19495 PF03956 Lysine exporter LysO FKM99_19505 PF00282 Pyridoxal-dependent decarboxylase conserved domain FKM99_19510 PF01418 Helix-turn-helix domain, rpiR family FKM99_19510 PF01380 SIS domain FKM99_19515 PF00465 Iron-containing alcohol dehydrogenase FKM99_19525 PF00462 Glutaredoxin FKM99_19530 PF02080 TrkA-C domain FKM99_19530 PF06826 Predicted Permease Membrane Region FKM99_19535 PF07055 Enoyl reductase FAD binding domain FKM99_19535 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase FKM99_19535 PF12241 Trans-2-enoyl-CoA reductase catalytic region FKM99_19540 PF02770 Acyl-CoA dehydrogenase, middle domain FKM99_19540 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FKM99_19540 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FKM99_19540 PF09317 Domain of unknown function (DUF1974) FKM99_19545 PF00440 Bacterial regulatory proteins, tetR family FKM99_19545 PF16295 Tetracyclin repressor-like, C-terminal domain FKM99_19550 PF06965 Na+/H+ antiporter 1 FKM99_19565 PF00005 ABC transporter FKM99_19570 PF01554 MatE FKM99_19575 PF13460 NAD(P)H-binding FKM99_19575 PF11066 Protein of unknown function (DUF2867) FKM99_19580 PF03264 NapC/NirT cytochrome c family, N-terminal region FKM99_19595 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) FKM99_19610 PF07690 Major Facilitator Superfamily FKM99_19615 PF01479 S4 domain FKM99_19615 PF00849 RNA pseudouridylate synthase FKM99_19620 PF00271 Helicase conserved C-terminal domain FKM99_19620 PF04851 Type III restriction enzyme, res subunit FKM99_19630 PF00486 Transcriptional regulatory protein, C terminal FKM99_19630 PF00072 Response regulator receiver domain FKM99_19635 PF00672 HAMP domain FKM99_19635 PF00512 His Kinase A (phospho-acceptor) domain FKM99_19635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_19640 PF01386 Ribosomal L25p family FKM99_19655 PF02872 5'-nucleotidase, C-terminal domain FKM99_19655 PF00149 Calcineurin-like phosphoesterase FKM99_19670 PF06945 Protein of unknown function (DUF1289) FKM99_19680 PF00196 Bacterial regulatory proteins, luxR family FKM99_19680 PF00072 Response regulator receiver domain FKM99_19685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_19685 PF00512 His Kinase A (phospho-acceptor) domain FKM99_19695 PF07992 Pyridine nucleotide-disulphide oxidoreductase FKM99_19695 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FKM99_19705 PF09335 SNARE associated Golgi protein FKM99_19710 PF13416 Bacterial extracellular solute-binding protein FKM99_19715 PF00528 Binding-protein-dependent transport system inner membrane component FKM99_19720 PF00005 ABC transporter FKM99_19725 PF01066 CDP-alcohol phosphatidyltransferase FKM99_19740 PF01590 GAF domain FKM99_19740 PF00158 Sigma-54 interaction domain FKM99_19745 PF03063 Prismane/CO dehydrogenase family FKM99_19750 PF00111 2Fe-2S iron-sulfur cluster binding domain FKM99_19750 PF00970 Oxidoreductase FAD-binding domain FKM99_19750 PF00175 Oxidoreductase NAD-binding domain FKM99_19760 PF00849 RNA pseudouridylate synthase FKM99_19765 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FKM99_19765 PF00672 HAMP domain FKM99_19765 PF12729 Four helix bundle sensory module for signal transduction FKM99_19770 PF00209 Sodium:neurotransmitter symporter family FKM99_19775 PF13091 PLD-like domain FKM99_19775 PF13396 Phospholipase_D-nuclease N-terminal FKM99_19780 PF01053 Cys/Met metabolism PLP-dependent enzyme FKM99_19785 PF00561 alpha/beta hydrolase fold FKM99_19790 PF03280 Proteobacterial lipase chaperone protein FKM99_19795 PF13673 Acetyltransferase (GNAT) domain FKM99_19795 PF00958 GMP synthase C terminal domain FKM99_19795 PF00117 Glutamine amidotransferase class-I FKM99_19795 PF03352 Methyladenine glycosylase FKM99_19795 PF13302 Acetyltransferase (GNAT) domain FKM99_19800 PF00873 AcrB/AcrD/AcrF family FKM99_19810 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FKM99_19815 PF04024 PspC domain FKM99_19820 PF06667 Phage shock protein B FKM99_19825 PF04012 PspA/IM30 family FKM99_19830 PF02954 Bacterial regulatory protein, Fis family FKM99_19830 PF00158 Sigma-54 interaction domain FKM99_19835 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FKM99_19840 PF00528 Binding-protein-dependent transport system inner membrane component FKM99_19845 PF00528 Binding-protein-dependent transport system inner membrane component FKM99_19845 PF12911 N-terminal TM domain of oligopeptide transport permease C FKM99_19850 PF00005 ABC transporter FKM99_19850 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FKM99_19855 PF00005 ABC transporter FKM99_19865 PF02833 DHHA2 domain FKM99_19865 PF01368 DHH family FKM99_19875 PF16875 Glycosyl hydrolase family 36 N-terminal domain FKM99_19875 PF16874 Glycosyl hydrolase family 36 C-terminal domain FKM99_19880 PF00384 Molybdopterin oxidoreductase FKM99_19880 PF18364 Molybdopterin oxidoreductase N-terminal domain FKM99_19880 PF01568 Molydopterin dinucleotide binding domain FKM99_19885 PF03264 NapC/NirT cytochrome c family, N-terminal region FKM99_19890 PF06796 Periplasmic nitrate reductase protein NapE FKM99_19895 PF03649 Uncharacterised protein family (UPF0014) FKM99_19905 PF01226 Formate/nitrite transporter FKM99_19930 PF02698 DUF218 domain FKM99_19935 PF00265 Thymidine kinase FKM99_19940 PF01406 tRNA synthetases class I (C) catalytic domain FKM99_19940 PF09190 DALR domain FKM99_19945 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FKM99_19950 PF00149 Calcineurin-like phosphoesterase FKM99_19955 PF00563 EAL domain FKM99_19955 PF08668 HDOD domain FKM99_19965 PF02810 SEC-C motif FKM99_19970 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FKM99_19970 PF01502 Phosphoribosyl-AMP cyclohydrolase FKM99_19975 PF00977 Histidine biosynthesis protein FKM99_19980 PF00977 Histidine biosynthesis protein FKM99_19985 PF00117 Glutamine amidotransferase class-I FKM99_19990 PF08645 Polynucleotide kinase 3 phosphatase FKM99_19990 PF00475 Imidazoleglycerol-phosphate dehydratase FKM99_19995 PF00155 Aminotransferase class I and II FKM99_20000 PF00815 Histidinol dehydrogenase FKM99_20005 PF08029 HisG, C-terminal domain FKM99_20005 PF01634 ATP phosphoribosyltransferase FKM99_20010 PF00072 Response regulator receiver domain FKM99_20010 PF00158 Sigma-54 interaction domain FKM99_20010 PF02954 Bacterial regulatory protein, Fis family FKM99_20020 PF03553 Na+/H+ antiporter family FKM99_20025 PF00816 H-NS histone family FKM99_20030 PF00294 pfkB family carbohydrate kinase FKM99_20045 PF04356 Protein of unknown function (DUF489) FKM99_20050 PF08328 Adenylosuccinate lyase C-terminal FKM99_20050 PF00206 Lyase FKM99_20090 PF00106 short chain dehydrogenase FKM99_20100 PF01435 Peptidase family M48 FKM99_20115 PF08241 Methyltransferase domain FKM99_20120 PF00155 Aminotransferase class I and II FKM99_20125 PF04055 Radical SAM superfamily FKM99_20125 PF06968 Biotin and Thiamin Synthesis associated domain FKM99_20130 PF00202 Aminotransferase class-III FKM99_20135 PF01258 Prokaryotic dksA/traR C4-type zinc finger FKM99_20140 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FKM99_20140 PF02403 Seryl-tRNA synthetase N-terminal domain FKM99_20145 PF00004 ATPase family associated with various cellular activities (AAA) FKM99_20145 PF16193 AAA C-terminal domain FKM99_20145 PF12002 MgsA AAA+ ATPase C terminal FKM99_20150 PF03548 Outer membrane lipoprotein carrier protein LolA FKM99_20155 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FKM99_20155 PF01580 FtsK/SpoIIIE family FKM99_20155 PF17854 FtsK alpha domain FKM99_20155 PF09397 Ftsk gamma domain FKM99_20160 PF01037 Lrp/AsnC ligand binding domain FKM99_20165 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FKM99_20165 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FKM99_20175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_20175 PF03466 LysR substrate binding domain FKM99_20185 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) FKM99_20190 PF03372 Endonuclease/Exonuclease/phosphatase family FKM99_20200 PF00579 tRNA synthetases class I (W and Y) FKM99_20220 PF00873 AcrB/AcrD/AcrF family FKM99_20225 PF00529 HlyD membrane-fusion protein of T1SS FKM99_20225 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FKM99_20240 PF00672 HAMP domain FKM99_20240 PF02743 Cache domain FKM99_20240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FKM99_20250 PF06610 L-alanine exporter FKM99_20255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_20255 PF00512 His Kinase A (phospho-acceptor) domain FKM99_20255 PF09308 LuxQ, periplasmic FKM99_20255 PF00072 Response regulator receiver domain FKM99_20265 PF03738 Glutathionylspermidine synthase preATP-grasp FKM99_20275 PF03994 Domain of Unknown Function (DUF350) FKM99_20285 PF02445 Quinolinate synthetase A protein FKM99_20290 PF16331 TolA binding protein trimerisation FKM99_20290 PF13174 Tetratricopeptide repeat FKM99_20295 PF00691 OmpA family FKM99_20300 PF07676 WD40-like Beta Propeller Repeat FKM99_20300 PF04052 TolB amino-terminal domain FKM99_20310 PF02472 Biopolymer transport protein ExbD/TolR FKM99_20315 PF01618 MotA/TolQ/ExbB proton channel family FKM99_20320 PF03061 Thioesterase superfamily FKM99_20330 PF08173 Membrane bound YbgT-like protein FKM99_20335 PF02322 Cytochrome bd terminal oxidase subunit II FKM99_20340 PF01654 Cytochrome bd terminal oxidase subunit I FKM99_20345 PF05496 Holliday junction DNA helicase RuvB P-loop domain FKM99_20345 PF17864 RuvB AAA lid domain FKM99_20345 PF05491 RuvB C-terminal winged helix domain FKM99_20350 PF01330 RuvA N terminal domain FKM99_20350 PF07499 RuvA, C-terminal domain FKM99_20355 PF02203 Tar ligand binding domain homologue FKM99_20355 PF00672 HAMP domain FKM99_20355 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FKM99_20360 PF02075 Crossover junction endodeoxyribonuclease RuvC FKM99_20365 PF00152 tRNA synthetases class II (D, K and N) FKM99_20365 PF01336 OB-fold nucleic acid binding domain FKM99_20365 PF02938 GAD domain FKM99_20370 PF01904 Protein of unknown function DUF72 FKM99_20375 PF13649 Methyltransferase domain FKM99_20380 PF08003 Protein of unknown function (DUF1698) FKM99_20390 PF08443 RimK-like ATP-grasp domain FKM99_20390 PF18030 RimK PreATP-grasp domain FKM99_20400 PF18030 RimK PreATP-grasp domain FKM99_20400 PF08443 RimK-like ATP-grasp domain FKM99_20410 PF04310 MukB N-terminal FKM99_20410 PF16330 MukB hinge domain FKM99_20415 PF04288 MukE-like family FKM99_20420 PF03882 MukF winged-helix domain FKM99_20420 PF17192 MukF middle domain FKM99_20420 PF17193 MukF C-terminal domain FKM99_20430 PF02698 DUF218 domain FKM99_20435 PF00072 Response regulator receiver domain FKM99_20435 PF00486 Transcriptional regulatory protein, C terminal FKM99_20440 PF02613 Nitrate reductase delta subunit FKM99_20445 PF00356 Bacterial regulatory proteins, lacI family FKM99_20450 PF04994 TfoX C-terminal domain FKM99_20450 PF04993 TfoX N-terminal domain FKM99_20455 PF00665 Integrase core domain FKM99_20460 PF01695 IstB-like ATP binding protein FKM99_20480 PF00534 Glycosyl transferases group 1 FKM99_20480 PF08323 Starch synthase catalytic domain FKM99_20485 PF00483 Nucleotidyl transferase FKM99_20490 PF08272 Topoisomerase I zinc-ribbon-like FKM99_20490 PF01396 Topoisomerase DNA binding C4 zinc finger FKM99_20490 PF01751 Toprim domain FKM99_20490 PF01131 DNA topoisomerase FKM99_20495 PF10692 Protein of unknown function (DUF2498) FKM99_20500 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FKM99_20510 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FKM99_20515 PF04376 Arginine-tRNA-protein transferase, N terminus FKM99_20515 PF04377 Arginine-tRNA-protein transferase, C terminus FKM99_20520 PF01176 Translation initiation factor 1A / IF-1 FKM99_20530 PF10431 C-terminal, D2-small domain, of ClpB protein FKM99_20530 PF02861 Clp amino terminal domain, pathogenicity island component FKM99_20530 PF17871 AAA lid domain FKM99_20530 PF07724 AAA domain (Cdc48 subfamily) FKM99_20530 PF00004 ATPase family associated with various cellular activities (AAA) FKM99_20535 PF02617 ATP-dependent Clp protease adaptor protein ClpS FKM99_20540 PF00313 'Cold-shock' DNA-binding domain FKM99_20545 PF03971 Monomeric isocitrate dehydrogenase FKM99_20550 PF00849 RNA pseudouridylate synthase FKM99_20555 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) FKM99_20565 PF13307 Helicase C-terminal domain FKM99_20565 PF06733 DEAD_2 FKM99_20570 PF01925 Sulfite exporter TauE/SafE FKM99_20575 PF07445 Primosomal replication protein priC FKM99_20580 PF10689 Protein of unknown function (DUF2496) FKM99_20585 PF03372 Endonuclease/Exonuclease/phosphatase family FKM99_20595 PF00528 Binding-protein-dependent transport system inner membrane component FKM99_20600 PF00528 Binding-protein-dependent transport system inner membrane component FKM99_20605 PF00497 Bacterial extracellular solute-binding proteins, family 3 FKM99_20610 PF00005 ABC transporter FKM99_20630 PF02901 Pyruvate formate lyase-like FKM99_20630 PF01228 Glycine radical FKM99_20640 PF04055 Radical SAM superfamily FKM99_20650 PF03887 YfbU domain FKM99_20660 PF06798 PrkA serine protein kinase C-terminal domain FKM99_20660 PF08298 PrkA AAA domain FKM99_20665 PF04285 Protein of unknown function (DUF444) FKM99_20670 PF04293 SpoVR like protein FKM99_20675 PF02348 Cytidylyltransferase FKM99_20680 PF03966 Trm112p-like protein FKM99_20685 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FKM99_20690 PF00664 ABC transporter transmembrane region FKM99_20690 PF00005 ABC transporter FKM99_20695 PF03772 Competence protein FKM99_20695 PF00753 Metallo-beta-lactamase superfamily FKM99_20695 PF13567 Domain of unknown function (DUF4131) FKM99_20705 PF02687 FtsX-like permease family FKM99_20705 PF12704 MacB-like periplasmic core domain FKM99_20710 PF00005 ABC transporter FKM99_20715 PF12704 MacB-like periplasmic core domain FKM99_20715 PF02687 FtsX-like permease family FKM99_20725 PF00271 Helicase conserved C-terminal domain FKM99_20725 PF02559 CarD-like/TRCF domain FKM99_20725 PF17757 UvrB interaction domain FKM99_20725 PF00270 DEAD/DEAH box helicase FKM99_20725 PF03461 TRCF domain FKM99_20745 PF07992 Pyridine nucleotide-disulphide oxidoreductase FKM99_20755 PF05728 Uncharacterised protein family (UPF0227) FKM99_20765 PF08139 Prokaryotic membrane lipoprotein lipid attachment site FKM99_20765 PF13036 Peptidoglycan-synthase activator LpoB FKM99_20780 PF01230 HIT domain FKM99_20785 PF00672 HAMP domain FKM99_20785 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FKM99_20800 PF01048 Phosphorylase superfamily FKM99_20805 PF00403 Heavy-metal-associated domain FKM99_20810 PF00478 IMP dehydrogenase / GMP reductase domain FKM99_20810 PF00571 CBS domain FKM99_20825 PF00037 4Fe-4S binding domain FKM99_20825 PF11953 Domain of unknown function (DUF3470) FKM99_20830 PF08032 RNA 2'-O ribose methyltransferase substrate binding FKM99_20830 PF00588 SpoU rRNA Methylase family FKM99_20840 PF17152 Periplasmic sensor domain FKM99_20840 PF00990 Diguanylate cyclase, GGDEF domain FKM99_20850 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FKM99_20855 PF09619 Type III secretion system lipoprotein chaperone (YscW) FKM99_20870 PF13404 AsnC-type helix-turn-helix domain FKM99_20870 PF01037 Lrp/AsnC ligand binding domain FKM99_20875 PF00291 Pyridoxal-phosphate dependent enzyme FKM99_20900 PF00873 AcrB/AcrD/AcrF family FKM99_20905 PF13533 Biotin-lipoyl like FKM99_20930 PF07690 Major Facilitator Superfamily FKM99_20935 PF03601 Conserved hypothetical protein 698 FKM99_20945 PF13193 AMP-binding enzyme C-terminal domain FKM99_20945 PF00501 AMP-binding enzyme FKM99_20950 PF13378 Enolase C-terminal domain-like FKM99_20955 PF00378 Enoyl-CoA hydratase/isomerase FKM99_20960 PF12697 Alpha/beta hydrolase family FKM99_20965 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FKM99_20965 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FKM99_20965 PF16582 Middle domain of thiamine pyrophosphate FKM99_20970 PF00425 chorismate binding enzyme FKM99_20975 PF00155 Aminotransferase class I and II FKM99_20985 PF01966 HD domain FKM99_20985 PF13286 Phosphohydrolase-associated domain FKM99_21005 PF13145 PPIC-type PPIASE domain FKM99_21010 PF00216 Bacterial DNA-binding protein FKM99_21015 PF00004 ATPase family associated with various cellular activities (AAA) FKM99_21015 PF05362 Lon protease (S16) C-terminal proteolytic domain FKM99_21015 PF02190 ATP-dependent protease La (LON) substrate-binding domain FKM99_21020 PF10431 C-terminal, D2-small domain, of ClpB protein FKM99_21020 PF06689 ClpX C4-type zinc finger FKM99_21020 PF07724 AAA domain (Cdc48 subfamily) FKM99_21025 PF00574 Clp protease FKM99_21030 PF05697 Bacterial trigger factor protein (TF) FKM99_21030 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FKM99_21030 PF05698 Bacterial trigger factor protein (TF) C-terminus FKM99_21035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_21035 PF02743 Cache domain FKM99_21035 PF00512 His Kinase A (phospho-acceptor) domain FKM99_21040 PF02954 Bacterial regulatory protein, Fis family FKM99_21040 PF00158 Sigma-54 interaction domain FKM99_21040 PF00072 Response regulator receiver domain FKM99_21050 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FKM99_21055 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component FKM99_21060 PF03480 Bacterial extracellular solute-binding protein, family 7 FKM99_21065 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FKM99_21080 PF02386 Cation transport protein FKM99_21085 PF02080 TrkA-C domain FKM99_21085 PF02254 TrkA-N domain FKM99_21090 PF00270 DEAD/DEAH box helicase FKM99_21090 PF00271 Helicase conserved C-terminal domain FKM99_21095 PF01595 Cyclin M transmembrane N-terminal domain FKM99_21095 PF03471 Transporter associated domain FKM99_21095 PF00571 CBS domain FKM99_21105 PF04820 Tryptophan halogenase FKM99_21130 PF00550 Phosphopantetheine attachment site FKM99_21135 PF00550 Phosphopantetheine attachment site FKM99_21150 PF07977 FabA-like domain FKM99_21155 PF00535 Glycosyl transferase family 2 FKM99_21160 PF00221 Aromatic amino acid lyase FKM99_21185 PF02801 Beta-ketoacyl synthase, C-terminal domain FKM99_21185 PF00109 Beta-ketoacyl synthase, N-terminal domain FKM99_21190 PF07977 FabA-like domain FKM99_21200 PF02801 Beta-ketoacyl synthase, C-terminal domain FKM99_21200 PF00109 Beta-ketoacyl synthase, N-terminal domain FKM99_21215 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FKM99_21215 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FKM99_21220 PF01773 Na+ dependent nucleoside transporter N-terminus FKM99_21220 PF07662 Na+ dependent nucleoside transporter C-terminus FKM99_21220 PF07670 Nucleoside recognition FKM99_21225 PF03466 LysR substrate binding domain FKM99_21225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_21230 PF13406 Transglycosylase SLT domain FKM99_21235 PF05166 YcgL domain FKM99_21240 PF05209 Septum formation inhibitor MinC, N-terminal domain FKM99_21240 PF03775 Septum formation inhibitor MinC, C-terminal domain FKM99_21245 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FKM99_21250 PF03776 Septum formation topological specificity factor MinE FKM99_21255 PF00570 HRDC domain FKM99_21255 PF01612 3'-5' exonuclease FKM99_21260 PF13193 AMP-binding enzyme C-terminal domain FKM99_21260 PF00501 AMP-binding enzyme FKM99_21265 PF00561 alpha/beta hydrolase fold FKM99_21280 PF00814 Glycoprotease family FKM99_21285 PF13307 Helicase C-terminal domain FKM99_21285 PF04851 Type III restriction enzyme, res subunit FKM99_21290 PF00551 Formyl transferase FKM99_21290 PF01842 ACT domain FKM99_21295 PF06185 YecM protein FKM99_21305 PF03485 Arginyl tRNA synthetase N terminal domain FKM99_21305 PF05746 DALR anticodon binding domain FKM99_21305 PF00750 tRNA synthetases class I (R) FKM99_21320 PF07664 Ferrous iron transport protein B C terminus FKM99_21320 PF17910 FeoB cytosolic helical domain FKM99_21320 PF07670 Nucleoside recognition FKM99_21320 PF02421 Ferrous iron transport protein B FKM99_21325 PF04023 FeoA domain FKM99_21340 PF02311 AraC-like ligand binding domain FKM99_21340 PF12833 Helix-turn-helix domain FKM99_21345 PF01297 Zinc-uptake complex component A periplasmic FKM99_21350 PF00005 ABC transporter FKM99_21355 PF00950 ABC 3 transport family FKM99_21360 PF13230 Glutamine amidotransferases class-II FKM99_21365 PF13580 SIS domain FKM99_21370 PF02770 Acyl-CoA dehydrogenase, middle domain FKM99_21370 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FKM99_21370 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FKM99_21370 PF09317 Domain of unknown function (DUF1974) FKM99_21375 PF01740 STAS domain FKM99_21375 PF00916 Sulfate permease family FKM99_21380 PF00583 Acetyltransferase (GNAT) family FKM99_21400 PF00929 Exonuclease FKM99_21405 PF00075 RNase H FKM99_21410 PF08241 Methyltransferase domain FKM99_21415 PF00753 Metallo-beta-lactamase superfamily FKM99_21415 PF16123 Hydroxyacylglutathione hydrolase C-terminus FKM99_21420 PF01476 LysM domain FKM99_21420 PF01464 Transglycosylase SLT domain FKM99_21430 PF03372 Endonuclease/Exonuclease/phosphatase family FKM99_21435 PF00543 Nitrogen regulatory protein P-II FKM99_21440 PF00034 Cytochrome c FKM99_21445 PF01171 PP-loop family FKM99_21445 PF09179 TilS substrate binding domain FKM99_21445 PF11734 TilS substrate C-terminal domain FKM99_21450 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FKM99_21455 PF01336 OB-fold nucleic acid binding domain FKM99_21455 PF07733 Bacterial DNA polymerase III alpha NTPase domain FKM99_21455 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FKM99_21455 PF02811 PHP domain FKM99_21455 PF14579 Helix-hairpin-helix motif FKM99_21465 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FKM99_21465 PF00132 Bacterial transferase hexapeptide (six repeats) FKM99_21470 PF07977 FabA-like domain FKM99_21475 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FKM99_21475 PF00132 Bacterial transferase hexapeptide (six repeats) FKM99_21480 PF03938 Outer membrane protein (OmpH-like) FKM99_21485 PF07244 Surface antigen variable number repeat FKM99_21485 PF01103 Surface antigen FKM99_21490 PF02163 Peptidase family M50 FKM99_21490 PF17820 PDZ domain FKM99_21495 PF13288 DXP reductoisomerase C-terminal domain FKM99_21495 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FKM99_21495 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FKM99_21505 PF01255 Putative undecaprenyl diphosphate synthase FKM99_21510 PF01765 Ribosome recycling factor FKM99_21515 PF00696 Amino acid kinase family FKM99_21520 PF00889 Elongation factor TS FKM99_21525 PF00318 Ribosomal protein S2 FKM99_21530 PF00557 Metallopeptidase family M24 FKM99_21535 PF01909 Nucleotidyltransferase domain FKM99_21535 PF01842 ACT domain FKM99_21535 PF01966 HD domain FKM99_21535 PF08335 GlnD PII-uridylyltransferase FKM99_21540 PF11944 Protein of unknown function (DUF3461) FKM99_21545 PF00849 RNA pseudouridylate synthase FKM99_21550 PF04287 tRNA pseudouridine synthase C FKM99_21575 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FKM99_21580 PF03806 AbgT putative transporter family FKM99_21585 PF00444 Ribosomal protein L36 FKM99_21590 PF01197 Ribosomal protein L31 FKM99_21595 PF01980 tRNA-methyltransferase O FKM99_21595 PF18389 TrmO C-terminal domain FKM99_21600 PF03129 Anticodon binding domain FKM99_21600 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FKM99_21600 PF04073 Aminoacyl-tRNA editing domain FKM99_21610 PF06786 Uncharacterised protein family (UPF0253) FKM99_21620 PF00209 Sodium:neurotransmitter symporter family FKM99_21635 PF01272 Transcription elongation factor, GreA/GreB, C-term FKM99_21635 PF03449 Transcription elongation factor, N-terminal FKM99_21640 PF00270 DEAD/DEAH box helicase FKM99_21640 PF00271 Helicase conserved C-terminal domain FKM99_21640 PF00570 HRDC domain FKM99_21640 PF16124 RecQ zinc-binding FKM99_21640 PF09382 RQC domain FKM99_21645 PF11798 IMS family HHH motif FKM99_21645 PF11799 impB/mucB/samB family C-terminal domain FKM99_21645 PF00817 impB/mucB/samB family FKM99_21660 PF02424 ApbE family FKM99_21665 PF00175 Oxidoreductase NAD-binding domain FKM99_21665 PF00111 2Fe-2S iron-sulfur cluster binding domain FKM99_21665 PF00970 Oxidoreductase FAD-binding domain FKM99_21670 PF02508 Rnf-Nqr subunit, membrane protein FKM99_21675 PF02508 Rnf-Nqr subunit, membrane protein FKM99_21680 PF04205 FMN-binding domain FKM99_21685 PF03116 NQR2, RnfD, RnfE family FKM99_21690 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) FKM99_21690 PF11973 NQRA C-terminal domain FKM99_21695 PF01722 BolA-like protein FKM99_21700 PF05175 Methyltransferase small domain FKM99_21705 PF08139 Prokaryotic membrane lipoprotein lipid attachment site FKM99_21705 PF03923 Uncharacterized lipoprotein FKM99_21710 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FKM99_21715 PF07690 Major Facilitator Superfamily FKM99_21725 PF04542 Sigma-70 region 2 FKM99_21725 PF04545 Sigma-70, region 4 FKM99_21750 PF03502 Nucleoside-specific channel-forming protein, Tsx FKM99_21755 PF02558 Ketopantoate reductase PanE/ApbA FKM99_21755 PF08546 Ketopantoate reductase PanE/ApbA C terminal FKM99_21760 PF01965 DJ-1/PfpI family FKM99_21765 PF00266 Aminotransferase class-V FKM99_21770 PF17158 Membrane-associated sensor, integral membrane domain FKM99_21770 PF00990 Diguanylate cyclase, GGDEF domain FKM99_21775 PF02657 Fe-S metabolism associated domain FKM99_21780 PF00899 ThiF family FKM99_21785 PF03562 MltA specific insert domain FKM99_21785 PF06725 3D domain FKM99_21800 PF00696 Amino acid kinase family FKM99_21800 PF00583 Acetyltransferase (GNAT) family FKM99_21810 PF13538 UvrD-like helicase C-terminal domain FKM99_21815 PF00580 UvrD/REP helicase N-terminal domain FKM99_21815 PF13361 UvrD-like helicase C-terminal domain FKM99_21815 PF12705 PD-(D/E)XK nuclease superfamily FKM99_21825 PF17946 RecC C-terminal domain FKM99_21830 PF00884 Sulfatase FKM99_21830 PF11893 Domain of unknown function (DUF3413) FKM99_21840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_21840 PF03466 LysR substrate binding domain FKM99_21845 PF07130 YebG protein FKM99_21850 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle FKM99_21850 PF14602 Hexapeptide repeat of succinyl-transferase FKM99_21855 PF03009 Glycerophosphoryl diester phosphodiesterase family FKM99_21860 PF07690 Major Facilitator Superfamily FKM99_21875 PF00230 Major intrinsic protein FKM99_21880 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FKM99_21880 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FKM99_21885 PF00455 DeoR C terminal sensor domain FKM99_21885 PF08220 DeoR-like helix-turn-helix domain FKM99_21890 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FKM99_21890 PF01266 FAD dependent oxidoreductase FKM99_21895 PF01544 CorA-like Mg2+ transporter protein FKM99_21910 PF01588 Putative tRNA binding domain FKM99_21915 PF00356 Bacterial regulatory proteins, lacI family FKM99_21930 PF00356 Bacterial regulatory proteins, lacI family FKM99_21935 PF01263 Aldose 1-epimerase FKM99_21940 PF10509 Galactokinase galactose-binding signature FKM99_21940 PF08544 GHMP kinases C terminal FKM99_21940 PF00288 GHMP kinases N terminal domain FKM99_21945 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain FKM99_21945 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain FKM99_21950 PF16363 GDP-mannose 4,6 dehydratase FKM99_21960 PF00356 Bacterial regulatory proteins, lacI family FKM99_21965 PF16353 Domain of unknown function(DUF4981) FKM99_21965 PF02929 Beta galactosidase small chain FKM99_21965 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FKM99_21965 PF02837 Glycosyl hydrolases family 2, sugar binding domain FKM99_21965 PF00703 Glycosyl hydrolases family 2 FKM99_21970 PF04074 YhcH/YjgK/YiaL FKM99_21975 PF13520 Amino acid permease FKM99_21980 PF03466 LysR substrate binding domain FKM99_21980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_21995 PF00691 OmpA family FKM99_21995 PF05736 OprF membrane domain FKM99_22030 PF00437 Type II/IV secretion system protein FKM99_22045 PF13629 Pilus formation protein N terminal region FKM99_22045 PF00263 Bacterial type II and III secretion system protein FKM99_22045 PF04972 BON domain FKM99_22065 PF03466 LysR substrate binding domain FKM99_22065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_22070 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain FKM99_22070 PF01464 Transglycosylase SLT domain FKM99_22075 PF00196 Bacterial regulatory proteins, luxR family FKM99_22105 PF00501 AMP-binding enzyme FKM99_22115 PF03466 LysR substrate binding domain FKM99_22115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_22120 PF14492 Elongation Factor G, domain II FKM99_22120 PF00679 Elongation factor G C-terminus FKM99_22120 PF03144 Elongation factor Tu domain 2 FKM99_22120 PF03764 Elongation factor G, domain IV FKM99_22120 PF00009 Elongation factor Tu GTP binding domain FKM99_22125 PF18073 Rubredoxin metal binding domain FKM99_22135 PF18429 Domain of unknown function (DUF5609) FKM99_22145 PF01048 Phosphorylase superfamily FKM99_22150 PF01676 Metalloenzyme superfamily FKM99_22155 PF02885 Glycosyl transferase family, helical bundle domain FKM99_22155 PF00591 Glycosyl transferase family, a/b domain FKM99_22155 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain FKM99_22160 PF01791 DeoC/LacD family aldolase FKM99_22165 PF01773 Na+ dependent nucleoside transporter N-terminus FKM99_22165 PF07670 Nucleoside recognition FKM99_22165 PF07662 Na+ dependent nucleoside transporter C-terminus FKM99_22170 PF01026 TatD related DNase FKM99_22180 PF16658 Class II release factor RF3, C-terminal domain FKM99_22180 PF00009 Elongation factor Tu GTP binding domain FKM99_22180 PF03144 Elongation factor Tu domain 2 FKM99_22185 PF00717 Peptidase S24-like FKM99_22185 PF01381 Helix-turn-helix FKM99_22230 PF06122 Conjugative relaxosome accessory transposon protein FKM99_22260 PF04002 RadC-like JAB domain FKM99_22265 PF00092 von Willebrand factor type A domain FKM99_22285 PF07728 AAA domain (dynein-related subfamily) FKM99_22285 PF08406 CbbQ/NirQ/NorQ C-terminal FKM99_22300 PF00436 Single-strand binding protein family FKM99_22315 PF04231 Endonuclease I FKM99_22345 PF03616 Sodium/glutamate symporter FKM99_22365 PF02909 Tetracyclin repressor-like, C-terminal domain FKM99_22365 PF00440 Bacterial regulatory proteins, tetR family FKM99_22370 PF07690 Major Facilitator Superfamily FKM99_22375 PF00440 Bacterial regulatory proteins, tetR family FKM99_22395 PF06986 Type-1V conjugative transfer system mating pair stabilisation FKM99_22400 PF06834 TraU protein FKM99_22410 PF10502 Signal peptidase, peptidase S26 FKM99_22425 PF10411 Disulfide bond isomerase protein N-terminus FKM99_22425 PF13098 Thioredoxin-like domain FKM99_22515 PF18273 Type III R-M EcoP15I C-terminal domain FKM99_22515 PF01555 DNA methylase FKM99_22535 PF00929 Exonuclease FKM99_22535 PF02811 PHP domain FKM99_22535 PF14480 DNA polymerase III polC-type N-terminus I FKM99_22535 PF11490 DNA polymerase III polC-type N-terminus II FKM99_22535 PF07733 Bacterial DNA polymerase III alpha NTPase domain FKM99_22535 PF01336 OB-fold nucleic acid binding domain FKM99_22535 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FKM99_22535 PF14579 Helix-hairpin-helix motif FKM99_22540 PF00717 Peptidase S24-like FKM99_22545 PF00817 impB/mucB/samB family FKM99_22545 PF13438 Domain of unknown function (DUF4113) FKM99_22545 PF11799 impB/mucB/samB family C-terminal domain FKM99_22580 PF00009 Elongation factor Tu GTP binding domain FKM99_22580 PF16658 Class II release factor RF3, C-terminal domain FKM99_22580 PF03144 Elongation factor Tu domain 2 FKM99_22600 PF13508 Acetyltransferase (GNAT) domain FKM99_22610 PF03707 Bacterial signalling protein N terminal repeat FKM99_22610 PF00563 EAL domain FKM99_22610 PF00990 Diguanylate cyclase, GGDEF domain FKM99_22625 PF01554 MatE FKM99_22635 PF13181 Tetratricopeptide repeat FKM99_22635 PF07719 Tetratricopeptide repeat FKM99_22640 PF01138 3' exoribonuclease family, domain 1 FKM99_22640 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FKM99_22640 PF00013 KH domain FKM99_22640 PF03725 3' exoribonuclease family, domain 2 FKM99_22640 PF00575 S1 RNA binding domain FKM99_22645 PF00312 Ribosomal protein S15 FKM99_22650 PF01509 TruB family pseudouridylate synthase (N terminal domain) FKM99_22650 PF16198 tRNA pseudouridylate synthase B C-terminal domain FKM99_22650 PF09157 Pseudouridine synthase II TruB, C-terminal FKM99_22655 PF02033 Ribosome-binding factor A FKM99_22660 PF04760 Translation initiation factor IF-2, N-terminal region FKM99_22660 PF00009 Elongation factor Tu GTP binding domain FKM99_22660 PF08364 Bacterial translation initiation factor IF-2 associated region FKM99_22660 PF11987 Translation-initiation factor 2 FKM99_22665 PF13184 NusA-like KH domain FKM99_22665 PF00575 S1 RNA binding domain FKM99_22665 PF08529 NusA N-terminal domain FKM99_22670 PF17384 RimP C-terminal SH3 domain FKM99_22670 PF02576 RimP N-terminal domain FKM99_22685 PF03840 Preprotein translocase SecG subunit FKM99_22695 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FKM99_22695 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FKM99_22695 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FKM99_22695 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FKM99_22700 PF00809 Pterin binding enzyme FKM99_22705 PF00004 ATPase family associated with various cellular activities (AAA) FKM99_22705 PF01434 Peptidase family M41 FKM99_22705 PF06480 FtsH Extracellular FKM99_22705 PF17862 AAA+ lid domain FKM99_22710 PF01728 FtsJ-like methyltransferase FKM99_22715 PF01985 CRS1 / YhbY (CRM) domain FKM99_22720 PF01272 Transcription elongation factor, GreA/GreB, C-term FKM99_22720 PF03449 Transcription elongation factor, N-terminal FKM99_22725 PF13609 Gram-negative porin FKM99_22730 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family FKM99_22740 PF00579 tRNA synthetases class I (W and Y) FKM99_22745 PF01476 LysM domain FKM99_22745 PF08525 Opacity-associated protein A N-terminal motif FKM99_22745 PF01551 Peptidase family M23 FKM99_22750 PF00873 AcrB/AcrD/AcrF family FKM99_22760 PF01521 Iron-sulphur cluster biosynthesis FKM99_22765 PF00202 Aminotransferase class-III FKM99_22770 PF01594 AI-2E family transporter FKM99_22775 PF08468 Methyltransferase small domain N-terminal FKM99_22775 PF05175 Methyltransferase small domain FKM99_22785 PF00512 His Kinase A (phospho-acceptor) domain FKM99_22785 PF00497 Bacterial extracellular solute-binding proteins, family 3 FKM99_22785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_22785 PF00072 Response regulator receiver domain FKM99_22790 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FKM99_22795 PF00528 Binding-protein-dependent transport system inner membrane component FKM99_22800 PF12911 N-terminal TM domain of oligopeptide transport permease C FKM99_22800 PF00528 Binding-protein-dependent transport system inner membrane component FKM99_22805 PF00005 ABC transporter FKM99_22805 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FKM99_22810 PF00005 ABC transporter FKM99_22810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FKM99_22820 PF01869 BadF/BadG/BcrA/BcrD ATPase family FKM99_22825 PF02838 Glycosyl hydrolase family 20, domain 2 FKM99_22825 PF00728 Glycosyl hydrolase family 20, catalytic domain FKM99_22830 PF06165 Glycosyltransferase family 36 FKM99_22830 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain FKM99_22835 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FKM99_22835 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FKM99_22835 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FKM99_22835 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FKM99_22840 PF08402 TOBE domain FKM99_22840 PF00005 ABC transporter FKM99_22850 PF13416 Bacterial extracellular solute-binding protein FKM99_22855 PF00909 Ammonium Transporter Family FKM99_22860 PF00543 Nitrogen regulatory protein P-II FKM99_22865 PF06062 Uncharacterised protein family (UPF0231) FKM99_22870 PF00330 Aconitase family (aconitate hydratase) FKM99_22870 PF11791 Aconitate B N-terminal domain FKM99_22870 PF06434 Aconitate hydratase 2 N-terminus FKM99_22875 PF01734 Patatin-like phospholipase FKM99_22880 PF00912 Transglycosylase FKM99_22880 PF00905 Penicillin binding protein transpeptidase domain FKM99_22880 PF14814 Bifunctional transglycosylase second domain FKM99_22885 PF00271 Helicase conserved C-terminal domain FKM99_22885 PF00270 DEAD/DEAH box helicase FKM99_22885 PF04408 Helicase associated domain (HA2) FKM99_22885 PF08482 ATP-dependent helicase C-terminal FKM99_22890 PF03749 Sugar fermentation stimulation protein RE domain FKM99_22890 PF17746 SfsA N-terminal OB domain FKM99_22895 PF01258 Prokaryotic dksA/traR C4-type zinc finger FKM99_22905 PF00749 tRNA synthetases class I (E and Q), catalytic domain FKM99_22915 PF12626 Polymerase A arginine-rich C-terminus FKM99_22915 PF01743 Poly A polymerase head domain FKM99_22915 PF12627 Probable RNA and SrmB- binding site of polymerase A FKM99_22920 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FKM99_22925 PF02548 Ketopantoate hydroxymethyltransferase FKM99_22930 PF02569 Pantoate-beta-alanine ligase FKM99_22940 PF03279 Bacterial lipid A biosynthesis acyltransferase FKM99_22950 PF01061 ABC-2 type transporter FKM99_22955 PF00005 ABC transporter FKM99_22965 PF01740 STAS domain FKM99_22965 PF00916 Sulfate permease family FKM99_22970 PF00484 Carbonic anhydrase FKM99_22975 PF00156 Phosphoribosyl transferase domain FKM99_22980 PF00440 Bacterial regulatory proteins, tetR family FKM99_22985 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FKM99_22985 PF07992 Pyridine nucleotide-disulphide oxidoreductase FKM99_22990 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FKM99_22990 PF00364 Biotin-requiring enzyme FKM99_22990 PF02817 e3 binding domain FKM99_22995 PF17831 Pyruvate dehydrogenase E1 component middle domain FKM99_22995 PF00456 Transketolase, thiamine diphosphate binding domain FKM99_23000 PF07729 FCD domain FKM99_23000 PF00392 Bacterial regulatory proteins, gntR family FKM99_23005 PF01510 N-acetylmuramoyl-L-alanine amidase FKM99_23010 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FKM99_23010 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FKM99_23015 PF00114 Pilin (bacterial filament) FKM99_23015 PF07963 Prokaryotic N-terminal methylation motif FKM99_23020 PF00437 Type II/IV secretion system protein FKM99_23020 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FKM99_23025 PF00482 Type II secretion system (T2SS), protein F FKM99_23030 PF06750 Bacterial Peptidase A24 N-terminal domain FKM99_23030 PF01478 Type IV leader peptidase family FKM99_23035 PF01121 Dephospho-CoA kinase FKM99_23040 PF07072 Cell division protein FKM99_23045 PF03884 DNA gyrase inhibitor YacG FKM99_23050 PF01245 Ribosomal protein L19 FKM99_23055 PF01746 tRNA (Guanine-1)-methyltransferase FKM99_23060 PF05239 PRC-barrel domain FKM99_23060 PF01782 RimM N-terminal domain FKM99_23065 PF00886 Ribosomal protein S16 FKM99_23070 PF02978 Signal peptide binding domain FKM99_23070 PF02881 SRP54-type protein, helical bundle domain FKM99_23070 PF00448 SRP54-type protein, GTPase domain FKM99_23075 PF01578 Cytochrome C assembly protein FKM99_23080 PF03471 Transporter associated domain FKM99_23080 PF01595 Cyclin M transmembrane N-terminal domain FKM99_23080 PF00571 CBS domain FKM99_23085 PF02664 S-Ribosylhomocysteinase (LuxS) FKM99_23095 PF04262 Glutamate-cysteine ligase FKM99_23100 PF05193 Peptidase M16 inactive domain FKM99_23100 PF00675 Insulinase (Peptidase family M16) FKM99_23105 PF09335 SNARE associated Golgi protein FKM99_23110 PF00107 Zinc-binding dehydrogenase FKM99_23110 PF08240 Alcohol dehydrogenase GroES-like domain FKM99_23115 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit FKM99_23120 PF02436 Conserved carboxylase domain FKM99_23120 PF00682 HMGL-like FKM99_23120 PF00364 Biotin-requiring enzyme FKM99_23125 PF04277 Oxaloacetate decarboxylase, gamma chain FKM99_23145 PF02599 Global regulator protein family FKM99_23150 PF13840 ACT domain FKM99_23150 PF01842 ACT domain FKM99_23150 PF00696 Amino acid kinase family FKM99_23155 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FKM99_23155 PF01411 tRNA synthetases class II (A) FKM99_23155 PF02272 DHHA1 domain FKM99_23160 PF02631 RecX family FKM99_23165 PF00154 recA bacterial DNA recombination protein FKM99_23170 PF02464 Competence-damaged protein FKM99_23175 PF05190 MutS family domain IV FKM99_23175 PF00488 MutS domain V FKM99_23175 PF05188 MutS domain II FKM99_23175 PF01624 MutS domain I FKM99_23175 PF05192 MutS domain III FKM99_23185 PF01476 LysM domain FKM99_23185 PF01551 Peptidase family M23 FKM99_23195 PF01975 Survival protein SurE FKM99_23200 PF01142 tRNA pseudouridine synthase D (TruD) FKM99_23205 PF02542 YgbB family FKM99_23210 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FKM99_23215 PF04977 Septum formation initiator FKM99_23220 PF00113 Enolase, C-terminal TIM barrel domain FKM99_23220 PF03952 Enolase, N-terminal domain FKM99_23225 PF06418 CTP synthase N-terminus FKM99_23225 PF00117 Glutamine amidotransferase class-I FKM99_23230 PF03819 MazG nucleotide pyrophosphohydrolase domain FKM99_23235 PF04607 Region found in RelA / SpoT proteins FKM99_23235 PF02824 TGS domain FKM99_23235 PF13291 ACT domain FKM99_23245 PF01938 TRAM domain FKM99_23245 PF05958 tRNA (Uracil-5-)-methyltransferase FKM99_23255 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FKM99_23255 PF00072 Response regulator receiver domain FKM99_23255 PF01627 Hpt domain FKM99_23255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_23255 PF00672 HAMP domain FKM99_23255 PF00512 His Kinase A (phospho-acceptor) domain FKM99_23260 PF01648 4'-phosphopantetheinyl transferase superfamily FKM99_23265 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FKM99_23270 PF11967 Recombination protein O N terminal FKM99_23270 PF02565 Recombination protein O C terminal FKM99_23275 PF07650 KH domain FKM99_23275 PF01926 50S ribosome-binding GTPase FKM99_23280 PF00035 Double-stranded RNA binding motif FKM99_23280 PF14622 Ribonuclease-III-like FKM99_23285 PF10502 Signal peptidase, peptidase S26 FKM99_23290 PF00009 Elongation factor Tu GTP binding domain FKM99_23290 PF03144 Elongation factor Tu domain 2 FKM99_23290 PF06421 GTP-binding protein LepA C-terminus FKM99_23290 PF00679 Elongation factor G C-terminus FKM99_23300 PF03888 MucB/RseB N-terminal domain FKM99_23300 PF17188 MucB/RseB C-terminal domain FKM99_23305 PF03872 Anti sigma-E protein RseA, N-terminal domain FKM99_23305 PF03873 Anti sigma-E protein RseA, C-terminal domain FKM99_23310 PF08281 Sigma-70, region 4 FKM99_23310 PF04542 Sigma-70 region 2 FKM99_23320 PF00890 FAD binding domain FKM99_23320 PF02910 Fumarate reductase flavoprotein C-term FKM99_23330 PF03937 Flavinator of succinate dehydrogenase FKM99_23335 PF01571 Aminomethyltransferase folate-binding domain FKM99_23350 PF01494 FAD binding domain FKM99_23355 PF01494 FAD binding domain FKM99_23360 PF03695 Uncharacterised protein family (UPF0149) FKM99_23370 PF05164 Cell division protein ZapA FKM99_23380 PF01812 5-formyltetrahydrofolate cyclo-ligase family FKM99_23385 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FKM99_23390 PF01842 ACT domain FKM99_23390 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FKM99_23390 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FKM99_23395 PF04402 Protein of unknown function (DUF541) FKM99_23400 PF03466 LysR substrate binding domain FKM99_23400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_23405 PF01810 LysE type translocator FKM99_23415 PF05552 Conserved TM helix FKM99_23415 PF00924 Mechanosensitive ion channel FKM99_23420 PF01116 Fructose-bisphosphate aldolase class-II FKM99_23425 PF00162 Phosphoglycerate kinase FKM99_23430 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FKM99_23430 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FKM99_23435 PF00593 TonB dependent receptor FKM99_23435 PF07715 TonB-dependent Receptor Plug Domain FKM99_23440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_23440 PF03466 LysR substrate binding domain FKM99_23445 PF00456 Transketolase, thiamine diphosphate binding domain FKM99_23445 PF02779 Transketolase, pyrimidine binding domain FKM99_23445 PF02780 Transketolase, C-terminal domain FKM99_23455 PF02773 S-adenosylmethionine synthetase, C-terminal domain FKM99_23455 PF00438 S-adenosylmethionine synthetase, N-terminal domain FKM99_23455 PF02772 S-adenosylmethionine synthetase, central domain FKM99_23465 PF10263 SprT-like family FKM99_23465 PF17283 SprT-like zinc ribbon domain FKM99_23470 PF04231 Endonuclease I FKM99_23475 PF04452 RNA methyltransferase FKM99_23480 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FKM99_23480 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FKM99_23485 PF02622 Uncharacterized ACR, COG1678 FKM99_23490 PF03652 Holliday junction resolvase FKM99_23495 PF00437 Type II/IV secretion system protein FKM99_23500 PF00437 Type II/IV secretion system protein FKM99_23505 PF01168 Alanine racemase, N-terminal domain FKM99_23510 PF03807 NADP oxidoreductase coenzyme F420-dependent FKM99_23510 PF14748 Pyrroline-5-carboxylate reductase dimerisation FKM99_23515 PF02325 YGGT family FKM99_23520 PF02594 Uncharacterised ACR, YggU family COG1872 FKM99_23530 PF01725 Ham1 family FKM99_23535 PF04055 Radical SAM superfamily FKM99_23535 PF06969 HemN C-terminal domain FKM99_23540 PF04960 Glutaminase FKM99_23545 PF02086 D12 class N6 adenine-specific DNA methyltransferase FKM99_23550 PF02390 Putative methyltransferase FKM99_23555 PF14815 NUDIX domain FKM99_23555 PF00633 Helix-hairpin-helix motif FKM99_23555 PF00730 HhH-GPD superfamily base excision DNA repair protein FKM99_23560 PF04362 Bacterial Fe(2+) trafficking FKM99_23565 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain FKM99_23565 PF01464 Transglycosylase SLT domain FKM99_23605 PF17200 Single Cache domain 2 FKM99_23605 PF00672 HAMP domain FKM99_23605 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FKM99_23635 PF00171 Aldehyde dehydrogenase family FKM99_23685 PF00072 Response regulator receiver domain FKM99_23690 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FKM99_23690 PF00356 Bacterial regulatory proteins, lacI family FKM99_23695 PF04794 YdjC-like protein FKM99_23700 PF02056 Family 4 glycosyl hydrolase FKM99_23700 PF11975 Family 4 glycosyl hydrolase C-terminal domain FKM99_23705 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit FKM99_23710 PF02378 Phosphotransferase system, EIIC FKM99_23715 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FKM99_23720 PF01522 Polysaccharide deacetylase FKM99_23735 PF06463 Molybdenum Cofactor Synthesis C FKM99_23735 PF04055 Radical SAM superfamily FKM99_23740 PF02223 Thymidylate kinase FKM99_23830 PF03707 Bacterial signalling protein N terminal repeat FKM99_23830 PF00990 Diguanylate cyclase, GGDEF domain FKM99_23830 PF00563 EAL domain FKM99_23840 PF00106 short chain dehydrogenase FKM99_23845 PF10011 Predicted membrane protein (DUF2254) FKM99_23855 PF03739 Lipopolysaccharide export system permease LptF/LptG FKM99_23860 PF03739 Lipopolysaccharide export system permease LptF/LptG FKM99_23865 PF00883 Cytosol aminopeptidase family, catalytic domain FKM99_23865 PF02789 Cytosol aminopeptidase family, N-terminal domain FKM99_23870 PF04364 DNA polymerase III chi subunit, HolC FKM99_23875 PF10458 Valyl tRNA synthetase tRNA binding arm FKM99_23875 PF00133 tRNA synthetases class I (I, L, M and V) FKM99_23875 PF08264 Anticodon-binding domain of tRNA FKM99_23885 PF00583 Acetyltransferase (GNAT) family FKM99_23895 PF06877 Regulator of ribonuclease activity B FKM99_23910 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FKM99_23910 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FKM99_23920 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FKM99_23920 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FKM99_23925 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain FKM99_23925 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain FKM99_23930 PF01042 Endoribonuclease L-PSP FKM99_23935 PF01553 Acyltransferase FKM99_23940 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FKM99_23945 PF01722 BolA-like protein FKM99_23955 PF05494 MlaC protein FKM99_23960 PF02470 MlaD protein FKM99_23965 PF02405 Permease MlaE FKM99_23970 PF00005 ABC transporter FKM99_23975 PF01699 Sodium/calcium exchanger protein FKM99_23980 PF01380 SIS domain FKM99_23980 PF00571 CBS domain FKM99_23990 PF03968 OstA-like protein FKM99_23995 PF00005 ABC transporter FKM99_23995 PF12399 Branched-chain amino acid ATP-binding cassette transporter FKM99_24000 PF04552 Sigma-54, DNA binding domain FKM99_24000 PF04963 Sigma-54 factor, core binding domain FKM99_24000 PF00309 Sigma-54 factor, Activator interacting domain (AID) FKM99_24005 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FKM99_24010 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FKM99_24015 PF03668 P-loop ATPase protein family FKM99_24020 PF00381 PTS HPr component phosphorylation site FKM99_24025 PF00571 CBS domain FKM99_24025 PF03448 MgtE intracellular N domain FKM99_24025 PF01769 Divalent cation transporter FKM99_24030 PF01523 Putative modulator of DNA gyrase FKM99_24035 PF04751 Protein of unknown function (DUF615) FKM99_24040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FKM99_24040 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FKM99_24045 PF00849 RNA pseudouridylate synthase FKM99_24060 PF18339 RapA N-terminal Tudor like domain 1 FKM99_24060 PF00176 SNF2 family N-terminal domain FKM99_24060 PF12137 RNA polymerase recycling family C-terminal FKM99_24060 PF00271 Helicase conserved C-terminal domain FKM99_24060 PF18337 RapA N-terminal Tudor like domain FKM99_24065 PF02562 PhoH-like protein FKM99_24065 PF13638 PIN domain FKM99_24070 PF01523 Putative modulator of DNA gyrase FKM99_24075 PF00795 Carbon-nitrogen hydrolase FKM99_24080 PF13502 AsmA-like C-terminal region FKM99_24080 PF13116 Protein of unknown function FKM99_24085 PF10150 Ribonuclease E/G family FKM99_24085 PF00575 S1 RNA binding domain FKM99_24090 PF02545 Maf-like protein FKM99_24095 PF04093 rod shape-determining protein MreD FKM99_24100 PF04085 rod shape-determining protein MreC FKM99_24140 PF07963 Prokaryotic N-terminal methylation motif FKM99_24140 PF08334 Type II secretion system (T2SS), protein G FKM99_24150 PF00482 Type II secretion system (T2SS), protein F FKM99_24155 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FKM99_24155 PF00437 Type II/IV secretion system protein FKM99_24165 PF01471 Putative peptidoglycan binding domain FKM99_24165 PF13401 AAA domain FKM99_24170 PF11741 AMIN domain FKM99_24170 PF03958 Bacterial type II/III secretion system short domain FKM99_24170 PF07660 Secretin and TonB N terminus short domain FKM99_24170 PF00263 Bacterial type II and III secretion system protein FKM99_24190 PF17157 Gammaproteobacterial periplasmic sensor domain FKM99_24190 PF00563 EAL domain FKM99_24190 PF00990 Diguanylate cyclase, GGDEF domain FKM99_24195 PF13542 Helix-turn-helix domain of transposase family ISL3 FKM99_24195 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 FKM99_24195 PF01610 Transposase FKM99_24215 PF01420 Type I restriction modification DNA specificity domain FKM99_24220 PF02384 N-6 DNA Methylase FKM99_24225 PF01526 Tn3 transposase DDE domain FKM99_24225 PF13700 Domain of unknown function (DUF4158) FKM99_24230 PF02796 Helix-turn-helix domain of resolvase FKM99_24230 PF00239 Resolvase, N terminal domain FKM99_24245 PF13737 Transposase DDE domain FKM99_24265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FKM99_24265 PF00672 HAMP domain FKM99_24265 PF17200 Single Cache domain 2 FKM99_24280 PF01381 Helix-turn-helix FKM99_24290 PF04851 Type III restriction enzyme, res subunit FKM99_24310 PF02899 Phage integrase, N-terminal SAM-like domain FKM99_24310 PF00589 Phage integrase family FKM99_24315 PF00436 Single-strand binding protein family FKM99_24320 PF00196 Bacterial regulatory proteins, luxR family FKM99_24325 PF00483 Nucleotidyl transferase FKM99_24330 PF17760 UvrA interaction domain FKM99_24330 PF17755 UvrA DNA-binding domain FKM99_24330 PF00005 ABC transporter FKM99_24340 PF00266 Aminotransferase class-V FKM99_24350 PF01842 ACT domain FKM99_24350 PF00696 Amino acid kinase family FKM99_24355 PF02574 Homocysteine S-methyltransferase FKM99_24355 PF00809 Pterin binding enzyme FKM99_24355 PF02965 Vitamin B12 dependent methionine synthase, activation domain FKM99_24355 PF02607 B12 binding domain FKM99_24355 PF02310 B12 binding domain FKM99_24360 PF00999 Sodium/hydrogen exchanger family FKM99_24435 PF01507 Phosphoadenosine phosphosulfate reductase family FKM99_24440 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FKM99_24440 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FKM99_24445 PF00258 Flavodoxin FKM99_24445 PF00175 Oxidoreductase NAD-binding domain FKM99_24445 PF00667 FAD binding domain FKM99_24470 PF01207 Dihydrouridine synthase (Dus) FKM99_24475 PF00589 Phage integrase family FKM99_24490 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) FKM99_24490 PF18766 SWI2/SNF2 ATPase FKM99_24490 PF12008 Type I restriction and modification enzyme - subunit R C terminal FKM99_24500 PF02384 N-6 DNA Methylase FKM99_24500 PF12161 HsdM N-terminal domain FKM99_24520 PF03432 Relaxase/Mobilisation nuclease domain FKM99_24545 PF01475 Ferric uptake regulator family FKM99_24555 PF00342 Phosphoglucose isomerase FKM99_24560 PF01894 Uncharacterised protein family UPF0047 FKM99_24570 PF00842 Alanine racemase, C-terminal domain FKM99_24570 PF01168 Alanine racemase, N-terminal domain FKM99_24575 PF03796 DnaB-like helicase C terminal domain FKM99_24575 PF00772 DnaB-like helicase N terminal domain FKM99_24585 PF01281 Ribosomal protein L9, N-terminal domain FKM99_24585 PF03948 Ribosomal protein L9, C-terminal domain FKM99_24590 PF01084 Ribosomal protein S18 FKM99_24595 PF00436 Single-strand binding protein family FKM99_24600 PF01250 Ribosomal protein S6 FKM99_24605 PF00834 Ribulose-phosphate 3 epimerase family FKM99_24610 PF02086 D12 class N6 adenine-specific DNA methyltransferase FKM99_24620 PF01761 3-dehydroquinate synthase FKM99_24625 PF01202 Shikimate kinase FKM99_24630 PF00263 Bacterial type II and III secretion system protein FKM99_24630 PF07660 Secretin and TonB N terminus short domain FKM99_24630 PF03958 Bacterial type II/III secretion system short domain FKM99_24630 PF11741 AMIN domain FKM99_24655 PF00912 Transglycosylase FKM99_24655 PF00905 Penicillin binding protein transpeptidase domain FKM99_24655 PF17092 Penicillin-binding protein OB-like domain FKM99_24660 PF03466 LysR substrate binding domain FKM99_24660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_24665 PF00462 Glutaredoxin FKM99_24665 PF08534 Redoxin FKM99_24680 PF00206 Lyase FKM99_24680 PF14698 Argininosuccinate lyase C-terminal FKM99_24680 PF00583 Acetyltransferase (GNAT) family FKM99_24685 PF00764 Arginosuccinate synthase FKM99_24690 PF00696 Amino acid kinase family FKM99_24695 PF01118 Semialdehyde dehydrogenase, NAD binding domain FKM99_24695 PF02774 Semialdehyde dehydrogenase, dimerisation domain FKM99_24700 PF01546 Peptidase family M20/M25/M40 FKM99_24700 PF07687 Peptidase dimerisation domain FKM99_24705 PF00311 Phosphoenolpyruvate carboxylase FKM99_24715 PF02219 Methylenetetrahydrofolate reductase FKM99_24720 PF03447 Homoserine dehydrogenase, NAD binding domain FKM99_24720 PF00696 Amino acid kinase family FKM99_24720 PF00742 Homoserine dehydrogenase FKM99_24725 PF01053 Cys/Met metabolism PLP-dependent enzyme FKM99_24730 PF01340 Met Apo-repressor, MetJ FKM99_24735 PF03949 Malic enzyme, NAD binding domain FKM99_24735 PF00390 Malic enzyme, N-terminal domain FKM99_24740 PF00210 Ferritin-like domain FKM99_24745 PF04324 BFD-like [2Fe-2S] binding domain FKM99_24750 PF03143 Elongation factor Tu C-terminal domain FKM99_24750 PF03144 Elongation factor Tu domain 2 FKM99_24750 PF00009 Elongation factor Tu GTP binding domain FKM99_24755 PF00679 Elongation factor G C-terminus FKM99_24755 PF14492 Elongation Factor G, domain II FKM99_24755 PF03764 Elongation factor G, domain IV FKM99_24755 PF00009 Elongation factor Tu GTP binding domain FKM99_24755 PF03144 Elongation factor Tu domain 2 FKM99_24760 PF00177 Ribosomal protein S7p/S5e FKM99_24765 PF00164 Ribosomal protein S12/S23 FKM99_24770 PF04077 DsrH like protein FKM99_24775 PF02635 DsrE/DsrF-like family FKM99_24780 PF02635 DsrE/DsrF-like family FKM99_24785 PF08348 YheO-like PAS domain FKM99_24785 PF13309 HTH domain FKM99_24790 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FKM99_24790 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FKM99_24800 PF04102 SlyX FKM99_24805 PF01112 Asparaginase FKM99_24815 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FKM99_24825 PF00999 Sodium/hydrogen exchanger family FKM99_24825 PF02254 TrkA-N domain FKM99_24830 PF02525 Flavodoxin-like fold FKM99_24840 PF12848 ABC transporter FKM99_24840 PF00005 ABC transporter FKM99_24850 PF00561 alpha/beta hydrolase fold FKM99_24855 PF06794 Uncharacterised protein family (UPF0270) FKM99_24860 PF00485 Phosphoribulokinase / Uridine kinase family FKM99_24865 PF13545 Crp-like helix-turn-helix domain FKM99_24865 PF00027 Cyclic nucleotide-binding domain FKM99_24875 PF00171 Aldehyde dehydrogenase family FKM99_24880 PF04958 Arginine N-succinyltransferase beta subunit FKM99_24885 PF00202 Aminotransferase class-III FKM99_24890 PF00117 Glutamine amidotransferase class-I FKM99_24920 PF00579 tRNA synthetases class I (W and Y) FKM99_24925 PF13419 Haloacid dehalogenase-like hydrolase FKM99_24930 PF08032 RNA 2'-O ribose methyltransferase substrate binding FKM99_24930 PF00588 SpoU rRNA Methylase family FKM99_24935 PF00575 S1 RNA binding domain FKM99_24935 PF00773 RNB domain FKM99_24935 PF08206 Ribonuclease B OB domain FKM99_24935 PF08461 Ribonuclease R winged-helix domain FKM99_24935 PF17876 Cold shock domain FKM99_24940 PF02082 Transcriptional regulator FKM99_24945 PF00175 Oxidoreductase NAD-binding domain FKM99_24945 PF00970 Oxidoreductase FAD-binding domain FKM99_24945 PF00042 Globin FKM99_24950 PF08238 Sel1 repeat FKM99_24960 PF00709 Adenylosuccinate synthetase FKM99_24965 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) FKM99_24970 PF01145 SPFH domain / Band 7 family FKM99_24975 PF12221 Bacterial membrane protein N terminal FKM99_24975 PF01145 SPFH domain / Band 7 family FKM99_24980 PF13167 GTP-binding GTPase N-terminal FKM99_24980 PF01926 50S ribosome-binding GTPase FKM99_24980 PF16360 GTP-binding GTPase Middle Region FKM99_24985 PF17209 Hfq protein FKM99_24995 PF01119 DNA mismatch repair protein, C-terminal domain FKM99_24995 PF08676 MutL C terminal dimerisation domain FKM99_25000 PF01520 N-acetylmuramoyl-L-alanine amidase FKM99_25005 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FKM99_25010 PF08331 Domain of unknown function (DUF1730) FKM99_25040 PF00929 Exonuclease FKM99_25045 PF03193 RsgA GTPase FKM99_25050 PF02666 Phosphatidylserine decarboxylase FKM99_25055 PF00939 Sodium:sulfate symporter transmembrane region FKM99_25060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FKM99_25060 PF00672 HAMP domain FKM99_25070 PF01676 Metalloenzyme superfamily FKM99_25070 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FKM99_25080 PF00581 Rhodanese-like domain FKM99_25085 PF02556 Preprotein translocase subunit SecB FKM99_25090 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FKM99_25090 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FKM99_25095 PF06426 Serine acetyltransferase, N-terminal FKM99_25095 PF00132 Bacterial transferase hexapeptide (six repeats) FKM99_25100 PF01551 Peptidase family M23 FKM99_25110 PF00440 Bacterial regulatory proteins, tetR family FKM99_25110 PF08360 QacR-like protein, C-terminal region FKM99_25120 PF00152 tRNA synthetases class II (D, K and N) FKM99_25130 PF00890 FAD binding domain FKM99_25130 PF02910 Fumarate reductase flavoprotein C-term FKM99_25135 PF13085 2Fe-2S iron-sulfur cluster binding domain FKM99_25135 PF13183 4Fe-4S dicluster domain FKM99_25140 PF02300 Fumarate reductase subunit C FKM99_25145 PF02313 Fumarate reductase subunit D FKM99_25155 PF09285 Elongation factor P, C-terminal FKM99_25155 PF01132 Elongation factor P (EF-P) OB domain FKM99_25155 PF08207 Elongation factor P (EF-P) KOW-like domain FKM99_25160 PF04055 Radical SAM superfamily FKM99_25175 PF00842 Alanine racemase, C-terminal domain FKM99_25175 PF01168 Alanine racemase, N-terminal domain FKM99_25180 PF02308 MgtC family FKM99_25190 PF00118 TCP-1/cpn60 chaperonin family FKM99_25195 PF00166 Chaperonin 10 Kd subunit FKM99_25200 PF01554 MatE FKM99_25205 PF00365 Phosphofructokinase FKM99_25210 PF01545 Cation efflux family FKM99_25210 PF16916 Dimerisation domain of Zinc Transporter FKM99_25215 PF07813 LTXXQ motif family protein FKM99_25225 PF00072 Response regulator receiver domain FKM99_25225 PF00486 Transcriptional regulatory protein, C terminal FKM99_25230 PF16527 Two-component sensor protein CpxA, periplasmic domain FKM99_25230 PF00672 HAMP domain FKM99_25230 PF00512 His Kinase A (phospho-acceptor) domain FKM99_25230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_25235 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FKM99_25235 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FKM99_25240 PF00588 SpoU rRNA Methylase family FKM99_25245 PF04186 FxsA cytoplasmic membrane protein FKM99_25250 PF00206 Lyase FKM99_25250 PF10415 Fumarase C C-terminus FKM99_25255 PF03605 Anaerobic c4-dicarboxylate membrane transporter FKM99_25260 PF02683 Cytochrome C biogenesis protein transmembrane region FKM99_25260 PF11412 Disulphide bond corrector protein DsbC FKM99_25265 PF00196 Bacterial regulatory proteins, luxR family FKM99_25265 PF00072 Response regulator receiver domain FKM99_25270 PF00999 Sodium/hydrogen exchanger family FKM99_25270 PF03471 Transporter associated domain FKM99_25270 PF02080 TrkA-C domain FKM99_25280 PF00474 Sodium:solute symporter family FKM99_25300 PF10415 Fumarase C C-terminus FKM99_25300 PF00206 Lyase FKM99_25305 PF00512 His Kinase A (phospho-acceptor) domain FKM99_25305 PF09308 LuxQ, periplasmic FKM99_25305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FKM99_25305 PF00072 Response regulator receiver domain FKM99_25310 PF12832 MFS_1 like family FKM99_25325 PF00501 AMP-binding enzyme FKM99_25325 PF13193 AMP-binding enzyme C-terminal domain FKM99_25325 PF16177 Acetyl-coenzyme A synthetase N-terminus FKM99_25330 PF01220 Dehydroquinase class II FKM99_25335 PF00364 Biotin-requiring enzyme FKM99_25340 PF00289 Biotin carboxylase, N-terminal domain FKM99_25340 PF02785 Biotin carboxylase C-terminal domain FKM99_25340 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FKM99_25355 PF01207 Dihydrouridine synthase (Dus) FKM99_25360 PF02954 Bacterial regulatory protein, Fis family FKM99_25365 PF07690 Major Facilitator Superfamily FKM99_25370 PF12848 ABC transporter FKM99_25370 PF00005 ABC transporter FKM99_25375 PF00990 Diguanylate cyclase, GGDEF domain FKM99_25375 PF05230 MASE2 domain FKM99_25445 PF01276 Orn/Lys/Arg decarboxylase, major domain FKM99_25445 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain FKM99_25445 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain FKM99_25450 PF13520 Amino acid permease FKM99_25460 PF18500 CadC C-terminal domain 1 FKM99_25460 PF00486 Transcriptional regulatory protein, C terminal FKM99_25465 PF13411 MerR HTH family regulatory protein FKM99_25475 PF02142 MGS-like domain FKM99_25475 PF01808 AICARFT/IMPCHase bienzyme FKM99_25485 PF02843 Phosphoribosylglycinamide synthetase, C domain FKM99_25485 PF02844 Phosphoribosylglycinamide synthetase, N domain FKM99_25485 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FKM99_25495 PF00216 Bacterial DNA-binding protein FKM99_25500 PF00571 CBS domain FKM99_25500 PF01595 Cyclin M transmembrane N-terminal domain FKM99_25505 PF04222 Protein of unknown function (DUF416) FKM99_25510 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FKM99_25515 PF03167 Uracil DNA glycosylase superfamily FKM99_25520 PF01208 Uroporphyrinogen decarboxylase (URO-D) FKM99_25535 PF00293 NUDIX domain FKM99_25535 PF09297 NADH pyrophosphatase zinc ribbon domain FKM99_25540 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ FKM99_25545 PF04998 RNA polymerase Rpb1, domain 5 FKM99_25545 PF05000 RNA polymerase Rpb1, domain 4 FKM99_25545 PF04997 RNA polymerase Rpb1, domain 1 FKM99_25545 PF00623 RNA polymerase Rpb1, domain 2 FKM99_25545 PF04983 RNA polymerase Rpb1, domain 3 FKM99_25550 PF04563 RNA polymerase beta subunit FKM99_25550 PF04565 RNA polymerase Rpb2, domain 3 FKM99_25550 PF04561 RNA polymerase Rpb2, domain 2 FKM99_25550 PF10385 RNA polymerase beta subunit external 1 domain FKM99_25550 PF00562 RNA polymerase Rpb2, domain 6 FKM99_25550 PF04560 RNA polymerase Rpb2, domain 7 FKM99_25555 PF00542 Ribosomal protein L7/L12 C-terminal domain FKM99_25555 PF16320 Ribosomal protein L7/L12 dimerisation domain FKM99_25560 PF00466 Ribosomal protein L10 FKM99_25565 PF00687 Ribosomal protein L1p/L10e family FKM99_25570 PF03946 Ribosomal protein L11, N-terminal domain FKM99_25570 PF00298 Ribosomal protein L11, RNA binding domain FKM99_25575 PF02357 Transcription termination factor nusG FKM99_25575 PF00467 KOW motif FKM99_25580 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FKM99_25590 PF03143 Elongation factor Tu C-terminal domain FKM99_25590 PF03144 Elongation factor Tu domain 2 FKM99_25590 PF00009 Elongation factor Tu GTP binding domain FKM99_25620 PF00485 Phosphoribulokinase / Uridine kinase family FKM99_25625 PF08279 HTH domain FKM99_25625 PF02237 Biotin protein ligase C terminal domain FKM99_25625 PF03099 Biotin/lipoate A/B protein ligase family FKM99_25630 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FKM99_25630 PF01565 FAD binding domain FKM99_25640 PF13091 PLD-like domain FKM99_25710 PF01177 Asp/Glu/Hydantoin racemase FKM99_25720 PF00593 TonB dependent receptor FKM99_25720 PF07715 TonB-dependent Receptor Plug Domain FKM99_25725 PF05958 tRNA (Uracil-5-)-methyltransferase FKM99_25735 PF00440 Bacterial regulatory proteins, tetR family FKM99_25740 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FKM99_25740 PF07992 Pyridine nucleotide-disulphide oxidoreductase FKM99_25745 PF01554 MatE FKM99_25750 PF04072 Leucine carboxyl methyltransferase FKM99_25755 PF01726 LexA DNA binding domain FKM99_25755 PF00717 Peptidase S24-like FKM99_25770 PF01553 Acyltransferase FKM99_25775 PF01040 UbiA prenyltransferase family FKM99_25780 PF04345 Chorismate lyase FKM99_25785 PF03748 Flagellar basal body-associated protein FliL FKM99_25790 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease FKM99_25790 PF01694 Rhomboid family FKM99_25795 PF00581 Rhodanese-like domain FKM99_25805 PF00140 Sigma-70 factor, region 1.2 FKM99_25805 PF04542 Sigma-70 region 2 FKM99_25805 PF04545 Sigma-70, region 4 FKM99_25810 PF18075 FtsX extracellular domain FKM99_25815 PF00005 ABC transporter FKM99_25820 PF02881 SRP54-type protein, helical bundle domain FKM99_25820 PF00448 SRP54-type protein, GTPase domain FKM99_25835 PF01914 MarC family integral membrane protein FKM99_25890 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FKM99_25890 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FKM99_25895 PF01022 Bacterial regulatory protein, arsR family FKM99_25900 PF00563 EAL domain FKM99_25900 PF08668 HDOD domain FKM99_25905 PF01810 LysE type translocator FKM99_25910 PF12146 Serine aminopeptidase, S33 FKM99_25940 PF00563 EAL domain FKM99_25940 PF00990 Diguanylate cyclase, GGDEF domain FKM99_25940 PF08495 FIST N domain FKM99_25940 PF10442 FIST C domain FKM99_25945 PF13419 Haloacid dehalogenase-like hydrolase FKM99_25950 PF02899 Phage integrase, N-terminal SAM-like domain FKM99_25950 PF00589 Phage integrase family FKM99_25960 PF01678 Diaminopimelate epimerase FKM99_25965 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FKM99_25965 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FKM99_25975 PF01491 Frataxin-like domain FKM99_25980 PF12633 Adenylate cyclase NT domain FKM99_25980 PF01295 Adenylate cyclase, class-I FKM99_25985 PF03900 Porphobilinogen deaminase, C-terminal domain FKM99_25985 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FKM99_25990 PF02602 Uroporphyrinogen-III synthase HemD FKM99_25995 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase FKM99_26000 PF07219 HemY protein N-terminus FKM99_26045 PF00175 Oxidoreductase NAD-binding domain FKM99_26050 PF00111 2Fe-2S iron-sulfur cluster binding domain FKM99_26055 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase FKM99_26070 PF07498 Rho termination factor, N-terminal domain FKM99_26070 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FKM99_26070 PF07497 Rho termination factor, RNA-binding domain FKM99_26075 PF00085 Thioredoxin FKM99_26080 PF00271 Helicase conserved C-terminal domain FKM99_26080 PF00270 DEAD/DEAH box helicase FKM99_26085 PF02541 Ppx/GppA phosphatase family FKM99_26090 PF02592 Putative vitamin uptake transporter FKM99_26105 PF09382 RQC domain FKM99_26105 PF16124 RecQ zinc-binding FKM99_26105 PF00570 HRDC domain FKM99_26105 PF00271 Helicase conserved C-terminal domain FKM99_26105 PF00270 DEAD/DEAH box helicase FKM99_26110 PF00892 EamA-like transporter family FKM99_26120 PF01810 LysE type translocator FKM99_26135 PF13361 UvrD-like helicase C-terminal domain FKM99_26135 PF00580 UvrD/REP helicase N-terminal domain FKM99_26145 PF05114 Protein of unknown function (DUF692) FKM99_26165 PF07690 Major Facilitator Superfamily FKM99_26170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_26170 PF03466 LysR substrate binding domain FKM99_26175 PF01321 Creatinase/Prolidase N-terminal domain FKM99_26175 PF01321 Creatinase/Prolidase N-terminal domain FKM99_26175 PF00557 Metallopeptidase family M24 FKM99_26175 PF00557 Metallopeptidase family M24 FKM99_26180 PF04055 Radical SAM superfamily FKM99_26180 PF06968 Biotin and Thiamin Synthesis associated domain FKM99_26185 PF05690 Thiazole biosynthesis protein ThiG FKM99_26190 PF02597 ThiS family FKM99_26195 PF00899 ThiF family FKM99_26200 PF02581 Thiamine monophosphate synthase FKM99_26205 PF01964 Radical SAM ThiC family FKM99_26205 PF13667 ThiC-associated domain FKM99_26210 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FKM99_26265 PF00132 Bacterial transferase hexapeptide (six repeats) FKM99_26270 PF07369 Protein of unknown function (DUF1488) FKM99_26275 PF08501 Shikimate dehydrogenase substrate binding domain FKM99_26275 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FKM99_26275 PF01488 Shikimate / quinate 5-dehydrogenase FKM99_26280 PF01218 Coproporphyrinogen III oxidase FKM99_26285 PF01300 Telomere recombination FKM99_26290 PF00731 AIR carboxylase FKM99_26295 PF02222 ATP-grasp domain FKM99_26295 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FKM99_26300 PF01396 Topoisomerase DNA binding C4 zinc finger FKM99_26305 PF04361 Protein of unknown function (DUF494) FKM99_26310 PF17782 DprA winged helix domain FKM99_26310 PF02481 DNA recombination-mediator protein A FKM99_26320 PF01327 Polypeptide deformylase FKM99_26325 PF00551 Formyl transferase FKM99_26325 PF02911 Formyl transferase, C-terminal domain FKM99_26330 PF01189 16S rRNA methyltransferase RsmB/F FKM99_26330 PF01029 NusB family FKM99_26335 PF02080 TrkA-C domain FKM99_26335 PF02254 TrkA-N domain FKM99_26340 PF02386 Cation transport protein FKM99_26350 PF03006 Haemolysin-III related FKM99_26355 PF07070 SpoOM protein FKM99_26365 PF06288 Protein of unknown function (DUF1040) FKM99_26370 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase FKM99_26370 PF13746 4Fe-4S dicluster domain FKM99_26370 PF12801 4Fe-4S binding domain FKM99_26375 PF01636 Phosphotransferase enzyme family FKM99_26380 PF01323 DSBA-like thioredoxin domain FKM99_26385 PF01553 Acyltransferase FKM99_26395 PF13335 Magnesium chelatase, subunit ChlI C-terminal FKM99_26395 PF01078 Magnesium chelatase, subunit ChlI FKM99_26400 PF00205 Thiamine pyrophosphate enzyme, central domain FKM99_26400 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FKM99_26400 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FKM99_26410 PF01063 Amino-transferase class IV FKM99_26415 PF00920 Dehydratase family FKM99_26420 PF00291 Pyridoxal-phosphate dependent enzyme FKM99_26420 PF00585 C-terminal regulatory domain of Threonine dehydratase FKM99_26425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FKM99_26425 PF03466 LysR substrate binding domain FKM99_26430 PF07690 Major Facilitator Superfamily FKM99_26435 PF00497 Bacterial extracellular solute-binding proteins, family 3 FKM99_26440 PF00528 Binding-protein-dependent transport system inner membrane component FKM99_26445 PF12804 MobA-like NTP transferase domain FKM99_26445 PF00132 Bacterial transferase hexapeptide (six repeats) FKM99_26450 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain FKM99_26450 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FKM99_26455 PF02874 ATP synthase alpha/beta family, beta-barrel domain FKM99_26455 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FKM99_26460 PF00231 ATP synthase FKM99_26465 PF02874 ATP synthase alpha/beta family, beta-barrel domain FKM99_26465 PF00306 ATP synthase alpha/beta chain, C terminal domain FKM99_26465 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FKM99_26470 PF00213 ATP synthase delta (OSCP) subunit FKM99_26475 PF00430 ATP synthase B/B' CF(0) FKM99_26480 PF00137 ATP synthase subunit C FKM99_26485 PF00119 ATP synthase A chain FKM99_26490 PF03899 ATP synthase I chain FKM99_26495 PF17762 HTH domain found in ParB protein FKM99_26495 PF02195 ParB-like nuclease domain FKM99_26500 PF13614 AAA domain FKM99_26505 PF02527 rRNA small subunit methyltransferase G FKM99_26510 PF13932 GidA associated domain FKM99_26510 PF01134 Glucose inhibited division protein A FKM99_26515 PF00258 Flavodoxin FKM99_26535 PF01381 Helix-turn-helix FKM99_26590 PF12161 HsdM N-terminal domain FKM99_26590 PF02384 N-6 DNA Methylase FKM99_26600 PF00270 DEAD/DEAH box helicase FKM99_26600 PF13749 Putative ATP-dependent DNA helicase recG C-terminal FKM99_26600 PF17191 RecG wedge domain FKM99_26615 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) FKM99_26615 PF11867 Domain of unknown function (DUF3387) FKM99_26615 PF18766 SWI2/SNF2 ATPase FKM99_26640 PF00589 Phage integrase family FKM99_26640 PF02899 Phage integrase, N-terminal SAM-like domain FKM99_26645 PF10396 GTP-binding protein TrmE N-terminus FKM99_26645 PF12631 MnmE helical domain FKM99_26645 PF01926 50S ribosome-binding GTPase FKM99_26650 PF02096 60Kd inner membrane protein FKM99_26650 PF14849 YidC periplasmic domain FKM99_26655 PF01809 Putative membrane protein insertion efficiency factor FKM99_26660 PF00825 Ribonuclease P FKM99_26665 PF00468 Ribosomal protein L34 FKM99_26670 PF00005 ABC transporter FKM99_26675 PF00528 Binding-protein-dependent transport system inner membrane component FKM99_26680 PF00497 Bacterial extracellular solute-binding proteins, family 3