locus-tag class description H9J99_00050 PF01177 Asp/Glu/Hydantoin racemase H9J99_00060 PF07715 TonB-dependent Receptor Plug Domain H9J99_00060 PF00593 TonB dependent receptor H9J99_00065 PF05958 tRNA (Uracil-5-)-methyltransferase H9J99_00105 PF06803 Protein of unknown function (DUF1232) H9J99_00135 PF08463 EcoEI R protein C-terminal H9J99_00135 PF00271 Helicase conserved C-terminal domain H9J99_00135 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) H9J99_00135 PF04851 Type III restriction enzyme, res subunit H9J99_00145 PF02384 N-6 DNA Methylase H9J99_00145 PF12161 HsdM N-terminal domain H9J99_00150 PF01420 Type I restriction modification DNA specificity domain H9J99_00175 PF00440 Bacterial regulatory proteins, tetR family H9J99_00180 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H9J99_00180 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9J99_00185 PF01554 MatE H9J99_00190 PF04072 Leucine carboxyl methyltransferase H9J99_00195 PF00717 Peptidase S24-like H9J99_00195 PF01726 LexA DNA binding domain H9J99_00200 PF01553 Acyltransferase H9J99_00205 PF01040 UbiA prenyltransferase family H9J99_00210 PF04345 Chorismate lyase H9J99_00215 PF03748 Flagellar basal body-associated protein FliL H9J99_00220 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease H9J99_00220 PF01694 Rhomboid family H9J99_00225 PF00581 Rhodanese-like domain H9J99_00230 PF00140 Sigma-70 factor, region 1.2 H9J99_00230 PF04545 Sigma-70, region 4 H9J99_00230 PF04542 Sigma-70 region 2 H9J99_00235 PF18075 FtsX extracellular domain H9J99_00240 PF00005 ABC transporter H9J99_00245 PF02881 SRP54-type protein, helical bundle domain H9J99_00245 PF00448 SRP54-type protein, GTPase domain H9J99_00260 PF01914 MarC family integral membrane protein H9J99_00310 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain H9J99_00310 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain H9J99_00315 PF01022 Bacterial regulatory protein, arsR family H9J99_00320 PF08668 HDOD domain H9J99_00320 PF00563 EAL domain H9J99_00325 PF01810 LysE type translocator H9J99_00330 PF12146 Serine aminopeptidase, S33 H9J99_00350 PF03942 DTW domain H9J99_00355 PF08495 FIST N domain H9J99_00355 PF00990 Diguanylate cyclase, GGDEF domain H9J99_00355 PF10442 FIST C domain H9J99_00355 PF00563 EAL domain H9J99_00360 PF13419 Haloacid dehalogenase-like hydrolase H9J99_00375 PF01678 Diaminopimelate epimerase H9J99_00380 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain H9J99_00380 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain H9J99_00390 PF01491 Frataxin-like domain H9J99_00395 PF01295 Adenylate cyclase, class-I H9J99_00395 PF12633 Adenylate cyclase NT domain H9J99_00400 PF03900 Porphobilinogen deaminase, C-terminal domain H9J99_00400 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain H9J99_00405 PF02602 Uroporphyrinogen-III synthase HemD H9J99_00410 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase H9J99_00415 PF07219 HemY protein N-terminus H9J99_00450 PF00175 Oxidoreductase NAD-binding domain H9J99_00455 PF00111 2Fe-2S iron-sulfur cluster binding domain H9J99_00460 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase H9J99_00470 PF07498 Rho termination factor, N-terminal domain H9J99_00470 PF07497 Rho termination factor, RNA-binding domain H9J99_00470 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H9J99_00475 PF00085 Thioredoxin H9J99_00480 PF00271 Helicase conserved C-terminal domain H9J99_00480 PF00270 DEAD/DEAH box helicase H9J99_00485 PF02541 Ppx/GppA phosphatase family H9J99_00490 PF02592 Putative vitamin uptake transporter H9J99_00500 PF09382 RQC domain H9J99_00500 PF16124 RecQ zinc-binding H9J99_00500 PF00570 HRDC domain H9J99_00500 PF00271 Helicase conserved C-terminal domain H9J99_00500 PF00270 DEAD/DEAH box helicase H9J99_00505 PF00892 EamA-like transporter family H9J99_00515 PF01810 LysE type translocator H9J99_00525 PF00580 UvrD/REP helicase N-terminal domain H9J99_00525 PF13361 UvrD-like helicase C-terminal domain H9J99_00535 PF05114 Protein of unknown function (DUF692) H9J99_00555 PF07690 Major Facilitator Superfamily H9J99_00560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_00560 PF03466 LysR substrate binding domain H9J99_00565 PF00557 Metallopeptidase family M24 H9J99_00565 PF01321 Creatinase/Prolidase N-terminal domain H9J99_00565 PF00557 Metallopeptidase family M24 H9J99_00565 PF01321 Creatinase/Prolidase N-terminal domain H9J99_00575 PF04055 Radical SAM superfamily H9J99_00575 PF06968 Biotin and Thiamin Synthesis associated domain H9J99_00580 PF05690 Thiazole biosynthesis protein ThiG H9J99_00585 PF02597 ThiS family H9J99_00590 PF00899 ThiF family H9J99_00595 PF02581 Thiamine monophosphate synthase H9J99_00600 PF01964 Radical SAM ThiC family H9J99_00600 PF13667 ThiC-associated domain H9J99_00605 PF02537 CrcB-like protein, Camphor Resistance (CrcB) H9J99_00650 PF12724 Flavodoxin domain H9J99_00655 PF02386 Cation transport protein H9J99_00660 PF01205 Uncharacterized protein family UPF0029 H9J99_00660 PF09186 Domain of unknown function (DUF1949) H9J99_00665 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H9J99_00665 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H9J99_00665 PF00378 Enoyl-CoA hydratase/isomerase H9J99_00670 PF02803 Thiolase, C-terminal domain H9J99_00670 PF00108 Thiolase, N-terminal domain H9J99_00675 PF08240 Alcohol dehydrogenase GroES-like domain H9J99_00675 PF00107 Zinc-binding dehydrogenase H9J99_00680 PF03466 LysR substrate binding domain H9J99_00680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_00690 PF01206 Sulfurtransferase TusA H9J99_00700 PF01169 Uncharacterized protein family UPF0016 H9J99_00705 PF02091 Glycyl-tRNA synthetase alpha subunit H9J99_00710 PF05746 DALR anticodon binding domain H9J99_00710 PF02092 Glycyl-tRNA synthetase beta subunit H9J99_00715 PF00128 Alpha amylase, catalytic domain H9J99_00720 PF00155 Aminotransferase class I and II H9J99_00725 PF00011 Hsp20/alpha crystallin family H9J99_00735 PF00204 DNA gyrase B H9J99_00735 PF01751 Toprim domain H9J99_00735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9J99_00735 PF18053 DNA gyrase B subunit insert domain H9J99_00735 PF00986 DNA gyrase B subunit, carboxyl terminus H9J99_00740 PF02463 RecF/RecN/SMC N terminal domain H9J99_00745 PF02768 DNA polymerase III beta subunit, C-terminal domain H9J99_00745 PF02767 DNA polymerase III beta subunit, central domain H9J99_00745 PF00712 DNA polymerase III beta subunit, N-terminal domain H9J99_00750 PF11638 DnaA N-terminal domain H9J99_00750 PF08299 Bacterial dnaA protein helix-turn-helix H9J99_00750 PF00308 Bacterial dnaA protein H9J99_00755 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9J99_00760 PF00528 Binding-protein-dependent transport system inner membrane component H9J99_00765 PF00005 ABC transporter H9J99_00770 PF00468 Ribosomal protein L34 H9J99_00775 PF00825 Ribonuclease P H9J99_00780 PF01809 Putative membrane protein insertion efficiency factor H9J99_00785 PF14849 YidC periplasmic domain H9J99_00785 PF02096 60Kd inner membrane protein H9J99_00790 PF10396 GTP-binding protein TrmE N-terminus H9J99_00790 PF12631 MnmE helical domain H9J99_00790 PF01926 50S ribosome-binding GTPase H9J99_00795 PF00258 Flavodoxin H9J99_00800 PF13932 GidA associated domain H9J99_00800 PF01134 Glucose inhibited division protein A H9J99_00810 PF13614 AAA domain H9J99_00815 PF02195 ParB-like nuclease domain H9J99_00815 PF17762 HTH domain found in ParB protein H9J99_00820 PF03899 ATP synthase I chain H9J99_00825 PF00119 ATP synthase A chain H9J99_00830 PF00137 ATP synthase subunit C H9J99_00835 PF00430 ATP synthase B/B' CF(0) H9J99_00840 PF00213 ATP synthase delta (OSCP) subunit H9J99_00850 PF00231 ATP synthase H9J99_00855 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H9J99_00855 PF02874 ATP synthase alpha/beta family, beta-barrel domain H9J99_00860 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain H9J99_00860 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain H9J99_00865 PF12804 MobA-like NTP transferase domain H9J99_00865 PF00132 Bacterial transferase hexapeptide (six repeats) H9J99_00870 PF00528 Binding-protein-dependent transport system inner membrane component H9J99_00875 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9J99_00880 PF07690 Major Facilitator Superfamily H9J99_00885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_00885 PF03466 LysR substrate binding domain H9J99_00890 PF00585 C-terminal regulatory domain of Threonine dehydratase H9J99_00890 PF00291 Pyridoxal-phosphate dependent enzyme H9J99_00895 PF00920 Dehydratase family H9J99_00900 PF01063 Amino-transferase class IV H9J99_00910 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H9J99_00910 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H9J99_00910 PF00205 Thiamine pyrophosphate enzyme, central domain H9J99_00915 PF01078 Magnesium chelatase, subunit ChlI H9J99_00915 PF13335 Magnesium chelatase, subunit ChlI C-terminal H9J99_00925 PF01553 Acyltransferase H9J99_00930 PF01323 DSBA-like thioredoxin domain H9J99_00935 PF01636 Phosphotransferase enzyme family H9J99_00940 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase H9J99_00940 PF12801 4Fe-4S binding domain H9J99_00940 PF13746 4Fe-4S dicluster domain H9J99_00945 PF06288 Protein of unknown function (DUF1040) H9J99_00955 PF07070 SpoOM protein H9J99_00960 PF03006 Haemolysin-III related H9J99_00970 PF02386 Cation transport protein H9J99_00975 PF02254 TrkA-N domain H9J99_00975 PF02080 TrkA-C domain H9J99_00980 PF01029 NusB family H9J99_00980 PF01189 16S rRNA methyltransferase RsmB/F H9J99_00985 PF00551 Formyl transferase H9J99_00985 PF02911 Formyl transferase, C-terminal domain H9J99_00990 PF01327 Polypeptide deformylase H9J99_01000 PF02481 DNA recombination-mediator protein A H9J99_01000 PF17782 DprA winged helix domain H9J99_01005 PF04361 Protein of unknown function (DUF494) H9J99_01010 PF01396 Topoisomerase DNA binding C4 zinc finger H9J99_01015 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain H9J99_01015 PF02222 ATP-grasp domain H9J99_01020 PF00731 AIR carboxylase H9J99_01025 PF01300 Telomere recombination H9J99_01030 PF01218 Coproporphyrinogen III oxidase H9J99_01035 PF08501 Shikimate dehydrogenase substrate binding domain H9J99_01035 PF01488 Shikimate / quinate 5-dehydrogenase H9J99_01035 PF18317 Shikimate 5'-dehydrogenase C-terminal domain H9J99_01040 PF07369 Protein of unknown function (DUF1488) H9J99_01045 PF00132 Bacterial transferase hexapeptide (six repeats) H9J99_01080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_01080 PF03466 LysR substrate binding domain H9J99_01085 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain H9J99_01085 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain H9J99_01090 PF04380 Membrane fusogenic activity H9J99_01095 PF00873 AcrB/AcrD/AcrF family H9J99_01100 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9J99_01105 PF00440 Bacterial regulatory proteins, tetR family H9J99_01105 PF16295 Tetracyclin repressor-like, C-terminal domain H9J99_01110 PF00580 UvrD/REP helicase N-terminal domain H9J99_01110 PF13361 UvrD-like helicase C-terminal domain H9J99_01115 PF13442 Cytochrome C oxidase, cbb3-type, subunit III H9J99_01145 PF13419 Haloacid dehalogenase-like hydrolase H9J99_01150 PF00005 ABC transporter H9J99_01150 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9J99_01155 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9J99_01160 PF00528 Binding-protein-dependent transport system inner membrane component H9J99_01165 PF12911 N-terminal TM domain of oligopeptide transport permease C H9J99_01165 PF00528 Binding-protein-dependent transport system inner membrane component H9J99_01195 PF00069 Protein kinase domain H9J99_01200 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family H9J99_01200 PF00356 Bacterial regulatory proteins, lacI family H9J99_01205 PF03466 LysR substrate binding domain H9J99_01205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_01210 PF00893 Small Multidrug Resistance protein H9J99_01215 PF00893 Small Multidrug Resistance protein H9J99_01220 PF00920 Dehydratase family H9J99_01225 PF01202 Shikimate kinase H9J99_01230 PF02447 GntP family permease H9J99_01235 PF01081 KDPG and KHG aldolase H9J99_01240 PF01048 Phosphorylase superfamily H9J99_01245 PF03466 LysR substrate binding domain H9J99_01245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_01250 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9J99_01250 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H9J99_01255 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ H9J99_01260 PF01432 Peptidase family M3 H9J99_01265 PF01037 Lrp/AsnC ligand binding domain H9J99_01270 PF00563 EAL domain H9J99_01270 PF00990 Diguanylate cyclase, GGDEF domain H9J99_01270 PF08448 PAS fold H9J99_01275 PF04445 Putative SAM-dependent methyltransferase H9J99_01285 PF00892 EamA-like transporter family H9J99_01290 PF00582 Universal stress protein family H9J99_01295 PF00210 Ferritin-like domain H9J99_01300 PF10625 Universal stress protein B (UspB) H9J99_01310 PF01590 GAF domain H9J99_01310 PF00158 Sigma-54 interaction domain H9J99_01310 PF02954 Bacterial regulatory protein, Fis family H9J99_01320 PF04972 BON domain H9J99_01370 PF01594 AI-2E family transporter H9J99_01375 PF00563 EAL domain H9J99_01375 PF00990 Diguanylate cyclase, GGDEF domain H9J99_01375 PF03707 Bacterial signalling protein N terminal repeat H9J99_01385 PF02646 RmuC family H9J99_01390 PF01209 ubiE/COQ5 methyltransferase family H9J99_01395 PF02036 SCP-2 sterol transfer family H9J99_01400 PF03109 ABC1 family H9J99_01405 PF02416 mttA/Hcf106 family H9J99_01410 PF02416 mttA/Hcf106 family H9J99_01415 PF00902 Sec-independent protein translocase protein (TatC) H9J99_01420 PF01026 TatD related DNase H9J99_01425 PF00490 Delta-aminolevulinic acid dehydratase H9J99_01440 PF01367 5'-3' exonuclease, C-terminal SAM fold H9J99_01440 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain H9J99_01440 PF00476 DNA polymerase family A H9J99_01440 PF01612 3'-5' exonuclease H9J99_01450 PF00034 Cytochrome c H9J99_01460 PF04220 Der GTPase activator (YihI) H9J99_01465 PF10675 Protein of unknown function (DUF2489) H9J99_01470 PF04055 Radical SAM superfamily H9J99_01470 PF06969 HemN C-terminal domain H9J99_01475 PF00962 Adenosine/AMP deaminase H9J99_01480 PF00563 EAL domain H9J99_01480 PF03707 Bacterial signalling protein N terminal repeat H9J99_01480 PF00990 Diguanylate cyclase, GGDEF domain H9J99_01485 PF02954 Bacterial regulatory protein, Fis family H9J99_01485 PF00072 Response regulator receiver domain H9J99_01485 PF00158 Sigma-54 interaction domain H9J99_01490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9J99_01490 PF00512 His Kinase A (phospho-acceptor) domain H9J99_01490 PF00989 PAS fold H9J99_01500 PF00120 Glutamine synthetase, catalytic domain H9J99_01500 PF03951 Glutamine synthetase, beta-Grasp domain H9J99_01505 PF00679 Elongation factor G C-terminus H9J99_01505 PF03144 Elongation factor Tu domain 2 H9J99_01505 PF00009 Elongation factor Tu GTP binding domain H9J99_01520 PF03631 Virulence factor BrkB H9J99_01525 PF02580 D-Tyr-tRNA(Tyr) deacylase H9J99_01530 PF09500 Putative thioesterase (yiiD_Cterm) H9J99_01530 PF00583 Acetyltransferase (GNAT) family H9J99_01540 PF01293 Phosphoenolpyruvate carboxykinase H9J99_01545 PF01430 Hsp33 protein H9J99_01550 PF01479 S4 domain H9J99_01555 PF11356 Type II secretion system protein C H9J99_01560 PF03958 Bacterial type II/III secretion system short domain H9J99_01560 PF00263 Bacterial type II and III secretion system protein H9J99_01565 PF00437 Type II/IV secretion system protein H9J99_01570 PF00482 Type II secretion system (T2SS), protein F H9J99_01575 PF08334 Type II secretion system (T2SS), protein G H9J99_01575 PF07963 Prokaryotic N-terminal methylation motif H9J99_01580 PF12019 Type II transport protein GspH H9J99_01585 PF02501 Type II secretion system (T2SS), protein I H9J99_01585 PF07963 Prokaryotic N-terminal methylation motif H9J99_01590 PF07963 Prokaryotic N-terminal methylation motif H9J99_01590 PF11612 Type II secretion system (T2SS), protein J H9J99_01595 PF03934 Type II secretion system (T2SS), protein K H9J99_01600 PF12693 GspL periplasmic domain H9J99_01600 PF05134 Type II secretion system (T2SS), protein L H9J99_01605 PF04612 Type II secretion system (T2SS), protein M H9J99_01610 PF01203 Type II secretion system (T2SS), protein N H9J99_01615 PF00459 Inositol monophosphatase family H9J99_01620 PF00293 NUDIX domain H9J99_01625 PF01521 Iron-sulphur cluster biosynthesis H9J99_01625 PF01106 NifU-like domain H9J99_01630 PF00156 Phosphoribosyl transferase domain H9J99_01635 PF00561 alpha/beta hydrolase fold H9J99_01645 PF17674 HHH domain H9J99_01645 PF00575 S1 RNA binding domain H9J99_01645 PF09371 Tex-like protein N-terminal domain H9J99_01645 PF16921 Tex protein YqgF-like domain H9J99_01655 PF03449 Transcription elongation factor, N-terminal H9J99_01655 PF01272 Transcription elongation factor, GreA/GreB, C-term H9J99_01665 PF00486 Transcriptional regulatory protein, C terminal H9J99_01665 PF00072 Response regulator receiver domain H9J99_01670 PF00672 HAMP domain H9J99_01670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9J99_01670 PF00512 His Kinase A (phospho-acceptor) domain H9J99_01675 PF00860 Permease family H9J99_01680 PF00270 DEAD/DEAH box helicase H9J99_01680 PF00271 Helicase conserved C-terminal domain H9J99_01680 PF17191 RecG wedge domain H9J99_01685 PF12105 SpoU, rRNA methylase, C-terminal H9J99_01685 PF00588 SpoU rRNA Methylase family H9J99_01690 PF04607 Region found in RelA / SpoT proteins H9J99_01690 PF02824 TGS domain H9J99_01690 PF13291 ACT domain H9J99_01695 PF01192 RNA polymerase Rpb6 H9J99_01700 PF00625 Guanylate kinase H9J99_01715 PF02472 Biopolymer transport protein ExbD/TolR H9J99_01720 PF01618 MotA/TolQ/ExbB proton channel family H9J99_01735 PF07715 TonB-dependent Receptor Plug Domain H9J99_01735 PF00593 TonB dependent receptor H9J99_01740 PF00528 Binding-protein-dependent transport system inner membrane component H9J99_01745 PF12911 N-terminal TM domain of oligopeptide transport permease C H9J99_01745 PF00528 Binding-protein-dependent transport system inner membrane component H9J99_01750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9J99_01755 PF00005 ABC transporter H9J99_01755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9J99_01760 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9J99_01760 PF00005 ABC transporter H9J99_01770 PF03755 YicC-like family, N-terminal region H9J99_01770 PF08340 Domain of unknown function (DUF1732) H9J99_01775 PF01138 3' exoribonuclease family, domain 1 H9J99_01775 PF03725 3' exoribonuclease family, domain 2 H9J99_01780 PF00156 Phosphoribosyl transferase domain H9J99_01785 PF03279 Bacterial lipid A biosynthesis acyltransferase H9J99_01790 PF00440 Bacterial regulatory proteins, tetR family H9J99_01795 PF02441 Flavoprotein H9J99_01795 PF04127 DNA / pantothenate metabolism flavoprotein H9J99_01800 PF17200 Single Cache domain 2 H9J99_01800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9J99_01800 PF00672 HAMP domain H9J99_01805 PF04002 RadC-like JAB domain H9J99_01810 PF00830 Ribosomal L28 family H9J99_01815 PF00471 Ribosomal protein L33 H9J99_01825 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain H9J99_01825 PF06827 Zinc finger found in FPG and IleRS H9J99_01825 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain H9J99_01835 PF05686 Glycosyl transferase family 90 H9J99_01845 PF00535 Glycosyl transferase family 2 H9J99_01850 PF00535 Glycosyl transferase family 2 H9J99_01855 PF01075 Glycosyltransferase family 9 (heptosyltransferase) H9J99_01860 PF01219 Prokaryotic diacylglycerol kinase H9J99_01870 PF16363 GDP-mannose 4,6 dehydratase H9J99_01875 PF00483 Nucleotidyl transferase H9J99_01885 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III H9J99_01885 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal H9J99_01905 PF00106 short chain dehydrogenase H9J99_01910 PF13193 AMP-binding enzyme C-terminal domain H9J99_01910 PF00501 AMP-binding enzyme H9J99_01915 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family H9J99_01925 PF02719 Polysaccharide biosynthesis protein H9J99_01930 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family H9J99_01935 PF02350 UDP-N-acetylglucosamine 2-epimerase H9J99_01940 PF08666 SAF domain H9J99_01940 PF03102 NeuB family H9J99_01950 PF00483 Nucleotidyl transferase H9J99_01955 PF02348 Cytidylyltransferase H9J99_01960 PF07922 Glycosyltransferase family 52 H9J99_01965 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) H9J99_01965 PF00534 Glycosyl transferases group 1 H9J99_01970 PF01075 Glycosyltransferase family 9 (heptosyltransferase) H9J99_01975 PF03279 Bacterial lipid A biosynthesis acyltransferase H9J99_01980 PF01370 NAD dependent epimerase/dehydratase family H9J99_01985 PF06082 Exopolysaccharide biosynthesis protein YbjH H9J99_02025 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal H9J99_02025 PF00132 Bacterial transferase hexapeptide (six repeats) H9J99_02025 PF14602 Hexapeptide repeat of succinyl-transferase H9J99_02035 PF00535 Glycosyl transferase family 2 H9J99_02040 PF13477 Glycosyl transferase 4-like H9J99_02040 PF00534 Glycosyl transferases group 1 H9J99_02045 PF13439 Glycosyltransferase Family 4 H9J99_02045 PF00534 Glycosyl transferases group 1 H9J99_02050 PF01370 NAD dependent epimerase/dehydratase family H9J99_02060 PF02719 Polysaccharide biosynthesis protein H9J99_02065 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain H9J99_02065 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain H9J99_02065 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain H9J99_02095 PF11999 Protein of unknown function (DUF3494) H9J99_02095 PF02368 Bacterial Ig-like domain (group 2) H9J99_02105 PF02796 Helix-turn-helix domain of resolvase H9J99_02105 PF00239 Resolvase, N terminal domain H9J99_02120 PF00121 Triosephosphate isomerase H9J99_02140 PF00455 DeoR C terminal sensor domain H9J99_02140 PF08220 DeoR-like helix-turn-helix domain H9J99_02145 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded H9J99_02150 PF06005 Cell division protein ZapB H9J99_02155 PF03737 Aldolase/RraA H9J99_02160 PF01040 UbiA prenyltransferase family H9J99_02165 PF00004 ATPase family associated with various cellular activities (AAA) H9J99_02165 PF07724 AAA domain (Cdc48 subfamily) H9J99_02170 PF00227 Proteasome subunit H9J99_02180 PF00356 Bacterial regulatory proteins, lacI family H9J99_02185 PF17764 3′ DNA-binding domain (3′BD) H9J99_02185 PF00270 DEAD/DEAH box helicase H9J99_02185 PF00271 Helicase conserved C-terminal domain H9J99_02185 PF18319 PriA DNA helicase Cys-rich region (CRR) domain H9J99_02185 PF18074 Primosomal protein N C-terminal domain H9J99_02190 PF01197 Ribosomal protein L31 H9J99_02195 PF00338 Ribosomal protein S10p/S20e H9J99_02200 PF00297 Ribosomal protein L3 H9J99_02205 PF00573 Ribosomal protein L4/L1 family H9J99_02210 PF00276 Ribosomal protein L23 H9J99_02215 PF00181 Ribosomal Proteins L2, RNA binding domain H9J99_02215 PF03947 Ribosomal Proteins L2, C-terminal domain H9J99_02220 PF00203 Ribosomal protein S19 H9J99_02225 PF00237 Ribosomal protein L22p/L17e H9J99_02230 PF07650 KH domain H9J99_02230 PF00189 Ribosomal protein S3, C-terminal domain H9J99_02235 PF00252 Ribosomal protein L16p/L10e H9J99_02240 PF00831 Ribosomal L29 protein H9J99_02245 PF00366 Ribosomal protein S17 H9J99_02250 PF00238 Ribosomal protein L14p/L23e H9J99_02255 PF00467 KOW motif H9J99_02255 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 H9J99_02260 PF00281 Ribosomal protein L5 H9J99_02260 PF00673 ribosomal L5P family C-terminus H9J99_02265 PF00253 Ribosomal protein S14p/S29e H9J99_02270 PF00410 Ribosomal protein S8 H9J99_02275 PF00347 Ribosomal protein L6 H9J99_02280 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast H9J99_02285 PF00333 Ribosomal protein S5, N-terminal domain H9J99_02285 PF03719 Ribosomal protein S5, C-terminal domain H9J99_02290 PF00327 Ribosomal protein L30p/L7e H9J99_02295 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A H9J99_02300 PF00344 SecY translocase H9J99_02305 PF00444 Ribosomal protein L36 H9J99_02310 PF00416 Ribosomal protein S13/S18 H9J99_02315 PF00411 Ribosomal protein S11 H9J99_02320 PF00163 Ribosomal protein S4/S9 N-terminal domain H9J99_02320 PF01479 S4 domain H9J99_02325 PF01000 RNA polymerase Rpb3/RpoA insert domain H9J99_02325 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain H9J99_02325 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain H9J99_02330 PF01196 Ribosomal protein L17 H9J99_02340 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H9J99_02340 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase H9J99_02350 PF13673 Acetyltransferase (GNAT) domain H9J99_02355 PF03880 DbpA RNA binding domain H9J99_02355 PF00270 DEAD/DEAH box helicase H9J99_02355 PF00271 Helicase conserved C-terminal domain H9J99_02365 PF00149 Calcineurin-like phosphoesterase H9J99_02365 PF02872 5'-nucleotidase, C-terminal domain H9J99_02370 PF10414 Sirohaem synthase dimerisation region H9J99_02370 PF14824 Sirohaem biosynthesis protein central H9J99_02370 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H9J99_02375 PF01507 Phosphoadenosine phosphosulfate reductase family H9J99_02380 PF00009 Elongation factor Tu GTP binding domain H9J99_02385 PF02080 TrkA-C domain H9J99_02385 PF03600 Citrate transporter H9J99_02410 PF00005 ABC transporter H9J99_02420 PF10795 Protein of unknown function (DUF2607) H9J99_02425 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) H9J99_02430 PF06526 Protein of unknown function (DUF1107) H9J99_02435 PF01625 Peptide methionine sulfoxide reductase H9J99_02440 PF01103 Surface antigen H9J99_02440 PF17243 POTRA domain TamA domain 1 H9J99_02445 PF04357 TamB, inner membrane protein subunit of TAM complex H9J99_02450 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like H9J99_02460 PF00719 Inorganic pyrophosphatase H9J99_02465 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain H9J99_02470 PF08245 Mur ligase middle domain H9J99_02470 PF02875 Mur ligase family, glutamate ligase domain H9J99_02470 PF01225 Mur ligase family, catalytic domain H9J99_02475 PF02441 Flavoprotein H9J99_02490 PF00005 ABC transporter H9J99_02505 PF16868 NMT1-like family H9J99_02510 PF01316 Arginine repressor, DNA binding domain H9J99_02510 PF02863 Arginine repressor, C-terminal domain H9J99_02515 PF00056 lactate/malate dehydrogenase, NAD binding domain H9J99_02515 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain H9J99_02525 PF00348 Polyprenyl synthetase H9J99_02530 PF00829 Ribosomal prokaryotic L21 protein H9J99_02535 PF01016 Ribosomal L27 protein H9J99_02540 PF01926 50S ribosome-binding GTPase H9J99_02540 PF01018 GTP1/OBG H9J99_02545 PF06738 Putative threonine/serine exporter H9J99_02550 PF12821 Threonine/Serine exporter, ThrE H9J99_02555 PF00186 Dihydrofolate reductase H9J99_02560 PF00149 Calcineurin-like phosphoesterase H9J99_02565 PF04379 ApaG domain H9J99_02570 PF00398 Ribosomal RNA adenine dimethylase H9J99_02575 PF04166 Pyridoxal phosphate biosynthetic protein PdxA H9J99_02580 PF09312 SurA N-terminal domain H9J99_02585 PF04453 LPS transport system D H9J99_02585 PF03968 OstA-like protein H9J99_02590 PF00226 DnaJ domain H9J99_02590 PF05099 Tellurite resistance protein TerB H9J99_02600 PF00694 Aconitase C-terminal domain H9J99_02605 PF00330 Aconitase family (aconitate hydratase) H9J99_02610 PF00180 Isocitrate/isopropylmalate dehydrogenase H9J99_02615 PF08502 LeuA allosteric (dimerisation) domain H9J99_02615 PF00682 HMGL-like H9J99_02625 PF01569 PAP2 superfamily H9J99_02635 PF03466 LysR substrate binding domain H9J99_02635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_02640 PF00501 AMP-binding enzyme H9J99_02645 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H9J99_02645 PF00205 Thiamine pyrophosphate enzyme, central domain H9J99_02645 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H9J99_02650 PF10369 Small subunit of acetolactate synthase H9J99_02655 PF00990 Diguanylate cyclase, GGDEF domain H9J99_02665 PF02887 Pyruvate kinase, alpha/beta domain H9J99_02665 PF00224 Pyruvate kinase, barrel domain H9J99_02670 PF00455 DeoR C terminal sensor domain H9J99_02670 PF08220 DeoR-like helix-turn-helix domain H9J99_02675 PF01380 SIS domain H9J99_02680 PF08721 TnsA endonuclease C terminal H9J99_02680 PF08722 TnsA endonuclease N terminal H9J99_02685 PF00665 Integrase core domain H9J99_02690 PF13401 AAA domain H9J99_02690 PF11426 Tn7 transposition regulator TnsC H9J99_02695 PF15978 Tn7-like transposition protein D H9J99_02695 PF06527 TniQ H9J99_02700 PF18623 TnsE C-terminal domain H9J99_02715 PF13936 Helix-turn-helix domain H9J99_02715 PF00665 Integrase core domain H9J99_02725 PF00872 Transposase, Mutator family H9J99_02730 PF00691 OmpA family H9J99_02730 PF01389 OmpA-like transmembrane domain H9J99_02780 PF00072 Response regulator receiver domain H9J99_02780 PF00486 Transcriptional regulatory protein, C terminal H9J99_02785 PF00512 His Kinase A (phospho-acceptor) domain H9J99_02785 PF00672 HAMP domain H9J99_02785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9J99_02790 PF00465 Iron-containing alcohol dehydrogenase H9J99_02795 PF02733 Dak1 domain H9J99_02800 PF02734 DAK2 domain H9J99_02805 PF05524 PEP-utilising enzyme, N-terminal H9J99_02805 PF00391 PEP-utilising enzyme, mobile domain H9J99_02805 PF02896 PEP-utilising enzyme, TIM barrel domain H9J99_02810 PF02954 Bacterial regulatory protein, Fis family H9J99_02810 PF00989 PAS fold H9J99_02810 PF00158 Sigma-54 interaction domain H9J99_02815 PF05068 Mannitol repressor H9J99_02820 PF01232 Mannitol dehydrogenase Rossmann domain H9J99_02820 PF08125 Mannitol dehydrogenase C-terminal domain H9J99_02825 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 H9J99_02825 PF02378 Phosphotransferase system, EIIC H9J99_02825 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit H9J99_02855 PF03180 NLPA lipoprotein H9J99_02885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9J99_02885 PF08447 PAS fold H9J99_02895 PF13737 Transposase DDE domain H9J99_02905 PF02796 Helix-turn-helix domain of resolvase H9J99_02905 PF00239 Resolvase, N terminal domain H9J99_02920 PF01420 Type I restriction modification DNA specificity domain H9J99_02925 PF02384 N-6 DNA Methylase H9J99_02925 PF12161 HsdM N-terminal domain H9J99_02940 PF00271 Helicase conserved C-terminal domain H9J99_02940 PF04851 Type III restriction enzyme, res subunit H9J99_02940 PF08463 EcoEI R protein C-terminal H9J99_02940 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) H9J99_02975 PF13657 HipA N-terminal domain H9J99_02975 PF07804 HipA-like C-terminal domain H9J99_02990 PF04546 Sigma-70, non-essential region H9J99_02990 PF03979 Sigma-70 factor, region 1.1 H9J99_02990 PF04542 Sigma-70 region 2 H9J99_02990 PF04539 Sigma-70 region 3 H9J99_02990 PF04545 Sigma-70, region 4 H9J99_02990 PF00140 Sigma-70 factor, region 1.2 H9J99_02995 PF10410 DnaB-helicase binding domain of primase H9J99_02995 PF08278 DNA primase DnaG DnaB-binding H9J99_02995 PF08275 DNA primase catalytic core, N-terminal domain H9J99_02995 PF01807 CHC2 zinc finger H9J99_03000 PF09424 Yqey-like protein H9J99_03005 PF01165 Ribosomal protein S21 H9J99_03010 PF00814 Glycoprotease family H9J99_03015 PF12697 Alpha/beta hydrolase family H9J99_03020 PF02660 Glycerol-3-phosphate acyltransferase H9J99_03025 PF02152 Dihydroneopterin aldolase H9J99_03030 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) H9J99_03035 PF02673 Bacitracin resistance protein BacA H9J99_03045 PF01471 Putative peptidoglycan binding domain H9J99_03045 PF13401 AAA domain H9J99_03055 PF08239 Bacterial SH3 domain H9J99_03060 PF01384 Phosphate transporter family H9J99_03065 PF01865 Protein of unknown function DUF47 H9J99_03070 PF01928 CYTH domain H9J99_03080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9J99_03080 PF00672 HAMP domain H9J99_03085 PF03710 Glutamate-ammonia ligase adenylyltransferase H9J99_03085 PF08335 GlnD PII-uridylyltransferase H9J99_03090 PF01467 Cytidylyltransferase-like H9J99_03090 PF00294 pfkB family carbohydrate kinase H9J99_03095 PF02321 Outer membrane efflux protein H9J99_03100 PF00293 NUDIX domain H9J99_03105 PF06853 Protein of unknown function (DUF1249) H9J99_03110 PF00149 Calcineurin-like phosphoesterase H9J99_03115 PF05728 Uncharacterised protein family (UPF0227) H9J99_03120 PF01751 Toprim domain H9J99_03120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9J99_03120 PF00986 DNA gyrase B subunit, carboxyl terminus H9J99_03120 PF00204 DNA gyrase B H9J99_03125 PF00521 DNA gyrase/topoisomerase IV, subunit A H9J99_03125 PF03989 DNA gyrase C-terminal domain, beta-propeller H9J99_03130 PF13180 PDZ domain H9J99_03140 PF06295 Protein of unknown function (DUF1043) H9J99_03145 PF03969 AFG1-like ATPase H9J99_03150 PF00572 Ribosomal protein L13 H9J99_03155 PF00380 Ribosomal protein S9/S16 H9J99_03160 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal H9J99_03160 PF00355 Rieske [2Fe-2S] domain H9J99_03165 PF00032 Cytochrome b(C-terminal)/b6/petD H9J99_03165 PF00033 Cytochrome b/b6/petB H9J99_03170 PF02167 Cytochrome C1 family H9J99_03175 PF02798 Glutathione S-transferase, N-terminal domain H9J99_03175 PF00043 Glutathione S-transferase, C-terminal domain H9J99_03180 PF04386 Stringent starvation protein B H9J99_03185 PF04972 BON domain H9J99_03190 PF13580 SIS domain H9J99_03195 PF02021 Uncharacterised protein family UPF0102 H9J99_03200 PF04348 LppC putative lipoprotein H9J99_03205 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H9J99_03215 PF01795 MraW methylase family H9J99_03220 PF04999 Cell division protein FtsL H9J99_03225 PF03717 Penicillin-binding Protein dimerisation domain H9J99_03225 PF00905 Penicillin binding protein transpeptidase domain H9J99_03230 PF01225 Mur ligase family, catalytic domain H9J99_03230 PF02875 Mur ligase family, glutamate ligase domain H9J99_03230 PF08245 Mur ligase middle domain H9J99_03235 PF02875 Mur ligase family, glutamate ligase domain H9J99_03235 PF08245 Mur ligase middle domain H9J99_03235 PF01225 Mur ligase family, catalytic domain H9J99_03240 PF00953 Glycosyl transferase family 4 H9J99_03240 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 H9J99_03245 PF02875 Mur ligase family, glutamate ligase domain H9J99_03245 PF08245 Mur ligase middle domain H9J99_03250 PF01098 Cell cycle protein H9J99_03255 PF04101 Glycosyltransferase family 28 C-terminal domain H9J99_03255 PF03033 Glycosyltransferase family 28 N-terminal domain H9J99_03260 PF01225 Mur ligase family, catalytic domain H9J99_03260 PF02875 Mur ligase family, glutamate ligase domain H9J99_03260 PF08245 Mur ligase middle domain H9J99_03265 PF03799 Cell division protein FtsQ H9J99_03265 PF08478 POTRA domain, FtsQ-type H9J99_03270 PF02491 SHS2 domain inserted in FTSA H9J99_03275 PF12327 FtsZ family, C-terminal domain H9J99_03275 PF00091 Tubulin/FtsZ family, GTPase domain H9J99_03280 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase H9J99_03290 PF02810 SEC-C motif H9J99_03290 PF07517 SecA DEAD-like domain H9J99_03290 PF01043 SecA preprotein cross-linking domain H9J99_03290 PF07516 SecA Wing and Scaffold domain H9J99_03295 PF00293 NUDIX domain H9J99_03300 PF01113 Dihydrodipicolinate reductase, N-terminus H9J99_03300 PF05173 Dihydrodipicolinate reductase, C-terminus H9J99_03305 PF00117 Glutamine amidotransferase class-I H9J99_03305 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain H9J99_03310 PF02142 MGS-like domain H9J99_03310 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H9J99_03310 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain H9J99_03325 PF01925 Sulfite exporter TauE/SafE H9J99_03330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_03330 PF03466 LysR substrate binding domain H9J99_03335 PF03458 UPF0126 domain H9J99_03340 PF01497 Periplasmic binding protein H9J99_03345 PF17113 Regulatory signalling modulator protein AmpE H9J99_03345 PF03186 CobD/Cbib protein H9J99_03350 PF01048 Phosphorylase superfamily H9J99_03360 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster H9J99_03360 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9J99_03365 PF04898 Glutamate synthase central domain H9J99_03365 PF01493 GXGXG motif H9J99_03365 PF00310 Glutamine amidotransferases class-II H9J99_03365 PF01645 Conserved region in glutamate synthase H9J99_03370 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9J99_03370 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster H9J99_03375 PF00310 Glutamine amidotransferases class-II H9J99_03375 PF04898 Glutamate synthase central domain H9J99_03375 PF01645 Conserved region in glutamate synthase H9J99_03375 PF01493 GXGXG motif H9J99_03380 PF04055 Radical SAM superfamily H9J99_03380 PF16199 Radical_SAM C-terminal domain H9J99_03385 PF00360 Phytochrome region H9J99_03385 PF00990 Diguanylate cyclase, GGDEF domain H9J99_03385 PF01590 GAF domain H9J99_03385 PF00563 EAL domain H9J99_03390 PF01627 Hpt domain H9J99_03390 PF18415 Histidine kinase receptor ArcB trans-membrane domain H9J99_03390 PF00072 Response regulator receiver domain H9J99_03390 PF00512 His Kinase A (phospho-acceptor) domain H9J99_03390 PF00989 PAS fold H9J99_03390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9J99_03400 PF00072 Response regulator receiver domain H9J99_03400 PF00486 Transcriptional regulatory protein, C terminal H9J99_03410 PF03737 Aldolase/RraA H9J99_03420 PF03447 Homoserine dehydrogenase, NAD binding domain H9J99_03420 PF01842 ACT domain H9J99_03420 PF13840 ACT domain H9J99_03420 PF00742 Homoserine dehydrogenase H9J99_03420 PF00696 Amino acid kinase family H9J99_03430 PF00291 Pyridoxal-phosphate dependent enzyme H9J99_03430 PF14821 Threonine synthase N terminus H9J99_03435 PF01228 Glycine radical H9J99_03440 PF01261 Xylose isomerase-like TIM barrel H9J99_03445 PF03167 Uracil DNA glycosylase superfamily H9J99_03460 PF01235 Sodium:alanine symporter family H9J99_03465 PF03883 Peroxide stress protein YaaA H9J99_03470 PF00271 Helicase conserved C-terminal domain H9J99_03470 PF00270 DEAD/DEAH box helicase H9J99_03475 PF05175 Methyltransferase small domain H9J99_03480 PF05525 Branched-chain amino acid transport protein H9J99_03485 PF00258 Flavodoxin H9J99_03490 PF00589 Phage integrase family H9J99_03490 PF02899 Phage integrase, N-terminal SAM-like domain H9J99_03495 PF13098 Thioredoxin-like domain H9J99_03495 PF10411 Disulfide bond isomerase protein N-terminus H9J99_03510 PF00152 tRNA synthetases class II (D, K and N) H9J99_03510 PF01336 OB-fold nucleic acid binding domain H9J99_03515 PF02954 Bacterial regulatory protein, Fis family H9J99_03515 PF00158 Sigma-54 interaction domain H9J99_03515 PF00072 Response regulator receiver domain H9J99_03525 PF00248 Aldo/keto reductase family H9J99_03535 PF02976 DNA mismatch repair enzyme MutH H9J99_03540 PF00293 NUDIX domain H9J99_03545 PF05524 PEP-utilising enzyme, N-terminal H9J99_03545 PF00391 PEP-utilising enzyme, mobile domain H9J99_03545 PF01590 GAF domain H9J99_03545 PF02896 PEP-utilising enzyme, TIM barrel domain H9J99_03550 PF01925 Sulfite exporter TauE/SafE H9J99_03555 PF01790 Prolipoprotein diacylglyceryl transferase H9J99_03560 PF00303 Thymidylate synthase H9J99_03570 PF02690 Na+/Pi-cotransporter H9J99_03575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_03575 PF03466 LysR substrate binding domain H9J99_03580 PF01022 Bacterial regulatory protein, arsR family H9J99_03585 PF01649 Ribosomal protein S20 H9J99_03590 PF03023 Lipid II flippase MurJ H9J99_03595 PF06574 FAD synthetase H9J99_03595 PF01687 Riboflavin kinase H9J99_03600 PF08264 Anticodon-binding domain of tRNA H9J99_03600 PF00133 tRNA synthetases class I (I, L, M and V) H9J99_03600 PF06827 Zinc finger found in FPG and IleRS H9J99_03605 PF01252 Signal peptidase (SPase) II H9J99_03610 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H9J99_03615 PF02401 LytB protein H9J99_03625 PF06580 Histidine kinase H9J99_03625 PF07694 5TMR of 5TMR-LYT H9J99_03630 PF02554 Carbon starvation protein CstA H9J99_03645 PF13580 SIS domain H9J99_03650 PF03702 Anhydro-N-acetylmuramic acid kinase H9J99_03655 PF00933 Glycosyl hydrolase family 3 N terminal domain H9J99_03660 PF00793 DAHP synthetase I family H9J99_03665 PF02153 Prephenate dehydrogenase H9J99_03665 PF01817 Chorismate mutase type II H9J99_03670 PF01551 Peptidase family M23 H9J99_03670 PF04225 Opacity-associated protein A LysM-like domain H9J99_03675 PF07238 PilZ domain H9J99_03690 PF01371 Trp repressor protein H9J99_03695 PF01931 Protein of unknown function DUF84 H9J99_03700 PF00800 Prephenate dehydratase H9J99_03700 PF01817 Chorismate mutase type II H9J99_03705 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein H9J99_03710 PF01464 Transglycosylase SLT domain H9J99_03715 PF13525 Outer membrane lipoprotein H9J99_03720 PF00849 RNA pseudouridylate synthase H9J99_03720 PF01479 S4 domain H9J99_03725 PF02578 Multi-copper polyphenol oxidoreductase laccase H9J99_03730 PF00004 ATPase family associated with various cellular activities (AAA) H9J99_03730 PF10431 C-terminal, D2-small domain, of ClpB protein H9J99_03730 PF02861 Clp amino terminal domain, pathogenicity island component H9J99_03730 PF17871 AAA lid domain H9J99_03730 PF07724 AAA domain (Cdc48 subfamily) H9J99_03775 PF03411 Penicillin-insensitive murein endopeptidase H9J99_03785 PF00037 4Fe-4S binding domain H9J99_03790 PF16325 Peptidase family U32 C-terminal domain H9J99_03790 PF01136 Peptidase family U32 H9J99_03795 PF04381 Putative exonuclease, RdgC H9J99_03800 PF00072 Response regulator receiver domain H9J99_03800 PF00486 Transcriptional regulatory protein, C terminal H9J99_03805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9J99_03805 PF00512 His Kinase A (phospho-acceptor) domain H9J99_03805 PF00989 PAS fold H9J99_03805 PF11808 Phosphate regulon sensor protein PhoR H9J99_03810 PF12849 PBP superfamily domain H9J99_03815 PF02541 Ppx/GppA phosphatase family H9J99_03820 PF17941 Polyphosphate kinase C-terminal domain 1 H9J99_03820 PF13089 Polyphosphate kinase N-terminal domain H9J99_03820 PF13090 Polyphosphate kinase C-terminal domain 2 H9J99_03820 PF02503 Polyphosphate kinase middle domain H9J99_03825 PF00528 Binding-protein-dependent transport system inner membrane component H9J99_03830 PF00528 Binding-protein-dependent transport system inner membrane component H9J99_03835 PF00005 ABC transporter H9J99_03840 PF01895 PhoU domain H9J99_03845 PF03976 Polyphosphate kinase 2 (PPK2) H9J99_03850 PF03932 CutC family H9J99_03855 PF10417 C-terminal domain of 1-Cys peroxiredoxin H9J99_03855 PF00578 AhpC/TSA family H9J99_03860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_03860 PF03466 LysR substrate binding domain H9J99_03865 PF01274 Malate synthase H9J99_03870 PF00463 Isocitrate lyase family H9J99_03875 PF00571 CBS domain H9J99_03885 PF02547 Queuosine biosynthesis protein H9J99_03890 PF01702 Queuine tRNA-ribosyltransferase H9J99_03895 PF02699 Preprotein translocase subunit H9J99_03900 PF13721 SecD export protein N-terminal TM region H9J99_03900 PF07549 SecD/SecF GG Motif H9J99_03900 PF02355 Protein export membrane protein H9J99_03905 PF07549 SecD/SecF GG Motif H9J99_03905 PF02355 Protein export membrane protein H9J99_03910 PF00459 Inositol monophosphatase family H9J99_03915 PF00588 SpoU rRNA Methylase family H9J99_03920 PF02082 Transcriptional regulator H9J99_03925 PF00266 Aminotransferase class-V H9J99_03930 PF01592 NifU-like N terminal domain H9J99_03935 PF01521 Iron-sulphur cluster biosynthesis H9J99_03940 PF07743 HSCB C-terminal oligomerisation domain H9J99_03940 PF00226 DnaJ domain H9J99_03945 PF00012 Hsp70 protein H9J99_03950 PF00111 2Fe-2S iron-sulfur cluster binding domain H9J99_03955 PF04384 Iron-sulphur cluster assembly H9J99_03960 PF00883 Cytosol aminopeptidase family, catalytic domain H9J99_03960 PF12404 Peptidase H9J99_03965 PF00334 Nucleoside diphosphate kinase H9J99_03970 PF04055 Radical SAM superfamily H9J99_03975 PF13464 Domain of unknown function (DUF4115) H9J99_03980 PF04551 GcpE protein H9J99_03985 PF03129 Anticodon binding domain H9J99_03985 PF13393 Histidyl-tRNA synthetase H9J99_03990 PF09976 Tetratricopeptide repeat-like domain H9J99_03995 PF13360 PQQ-like domain H9J99_04000 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal H9J99_04000 PF01926 50S ribosome-binding GTPase H9J99_04015 PF02601 Exonuclease VII, large subunit H9J99_04015 PF13742 OB-fold nucleic acid binding domain H9J99_04020 PF00571 CBS domain H9J99_04020 PF00478 IMP dehydrogenase / GMP reductase domain H9J99_04025 PF00117 Glutamine amidotransferase class-I H9J99_04025 PF00958 GMP synthase C terminal domain H9J99_04025 PF02540 NAD synthase H9J99_04030 PF03553 Na+/H+ antiporter family H9J99_04035 PF06483 Chitinase C H9J99_04035 PF00704 Glycosyl hydrolases family 18 H9J99_04040 PF01184 GPR1/FUN34/yaaH family H9J99_04050 PF01235 Sodium:alanine symporter family H9J99_04055 PF01266 FAD dependent oxidoreductase H9J99_04060 PF03466 LysR substrate binding domain H9J99_04060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_04075 PF07969 Amidohydrolase family H9J99_04080 PF01053 Cys/Met metabolism PLP-dependent enzyme H9J99_04085 PF00202 Aminotransferase class-III H9J99_04105 PF00583 Acetyltransferase (GNAT) family H9J99_04105 PF00795 Carbon-nitrogen hydrolase H9J99_04110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_04110 PF03466 LysR substrate binding domain H9J99_04165 PF00239 Resolvase, N terminal domain H9J99_04165 PF02796 Helix-turn-helix domain of resolvase H9J99_04180 PF01420 Type I restriction modification DNA specificity domain H9J99_04185 PF12161 HsdM N-terminal domain H9J99_04185 PF02384 N-6 DNA Methylase H9J99_04205 PF01555 DNA methylase H9J99_04210 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) H9J99_04210 PF04851 Type III restriction enzyme, res subunit H9J99_04210 PF08463 EcoEI R protein C-terminal H9J99_04210 PF00271 Helicase conserved C-terminal domain H9J99_04225 PF00589 Phage integrase family H9J99_04225 PF13356 Arm DNA-binding domain H9J99_04235 PF01668 SmpB protein H9J99_04240 PF03364 Polyketide cyclase / dehydrase and lipid transport H9J99_04245 PF03658 RnfH family Ubiquitin H9J99_04250 PF04355 SmpA / OmlA family H9J99_04255 PF02463 RecF/RecN/SMC N terminal domain H9J99_04265 PF01513 ATP-NAD kinase H9J99_04270 PF01025 GrpE H9J99_04275 PF00375 Sodium:dicarboxylate symporter family H9J99_04285 PF00012 Hsp70 protein H9J99_04290 PF00226 DnaJ domain H9J99_04290 PF01556 DnaJ C terminal domain H9J99_04290 PF00684 DnaJ central domain H9J99_04295 PF00114 Pilin (bacterial filament) H9J99_04295 PF07963 Prokaryotic N-terminal methylation motif H9J99_04300 PF00114 Pilin (bacterial filament) H9J99_04300 PF07963 Prokaryotic N-terminal methylation motif H9J99_04320 PF03806 AbgT putative transporter family H9J99_04325 PF14437 MafB19-like deaminase H9J99_04330 PF01464 Transglycosylase SLT domain H9J99_04330 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9J99_04335 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain H9J99_04335 PF02769 AIR synthase related protein, C-terminal domain H9J99_04335 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal H9J99_04360 PF01546 Peptidase family M20/M25/M40 H9J99_04360 PF07687 Peptidase dimerisation domain H9J99_04365 PF00860 Permease family H9J99_04370 PF00156 Phosphoribosyl transferase domain H9J99_04375 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) H9J99_04380 PF07417 Sigma factor-binding transcriptional regulator Crl H9J99_04385 PF01472 PUA domain H9J99_04385 PF00696 Amino acid kinase family H9J99_04390 PF00171 Aldehyde dehydrogenase family H9J99_04395 PF03477 ATP cone domain H9J99_04400 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region H9J99_04400 PF01872 RibD C-terminal domain H9J99_04405 PF00677 Lumazine binding domain H9J99_04410 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase H9J99_04410 PF00925 GTP cyclohydrolase II H9J99_04415 PF00885 6,7-dimethyl-8-ribityllumazine synthase H9J99_04420 PF01029 NusB family H9J99_04425 PF00586 AIR synthase related protein, N-terminal domain H9J99_04425 PF02769 AIR synthase related protein, C-terminal domain H9J99_04430 PF04608 Phosphatidylglycerophosphatase A H9J99_04435 PF02780 Transketolase, C-terminal domain H9J99_04435 PF02779 Transketolase, pyrimidine binding domain H9J99_04435 PF13292 1-deoxy-D-xylulose-5-phosphate synthase H9J99_04440 PF00348 Polyprenyl synthetase H9J99_04445 PF02609 Exonuclease VII small subunit H9J99_04450 PF01618 MotA/TolQ/ExbB proton channel family H9J99_04455 PF00691 OmpA family H9J99_04460 PF02568 Thiamine biosynthesis protein (ThiI) H9J99_04460 PF02926 THUMP domain H9J99_04465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_04465 PF03466 LysR substrate binding domain H9J99_04475 PF04241 Protein of unknown function (DUF423) H9J99_04480 PF01728 FtsJ-like methyltransferase H9J99_04480 PF18125 RlmM ferredoxin-like domain H9J99_04485 PF01223 DNA/RNA non-specific endonuclease H9J99_04490 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain H9J99_04490 PF01367 5'-3' exonuclease, C-terminal SAM fold H9J99_04495 PF03641 Possible lysine decarboxylase H9J99_04495 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases H9J99_04495 PF11892 Domain of unknown function (DUF3412) H9J99_04500 PF00990 Diguanylate cyclase, GGDEF domain H9J99_04510 PF14489 QueF-like protein H9J99_04510 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term H9J99_04515 PF07348 Syd protein (SUKH-2) H9J99_04520 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) H9J99_04525 PF03180 NLPA lipoprotein H9J99_04530 PF00528 Binding-protein-dependent transport system inner membrane component H9J99_04535 PF00005 ABC transporter H9J99_04535 PF09383 NIL domain H9J99_04545 PF00356 Bacterial regulatory proteins, lacI family H9J99_04550 PF02378 Phosphotransferase system, EIIC H9J99_04550 PF00367 phosphotransferase system, EIIB H9J99_04555 PF16657 Maltogenic Amylase, C-terminal domain H9J99_04555 PF00128 Alpha amylase, catalytic domain H9J99_04565 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 H9J99_04565 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) H9J99_04570 PF00464 Serine hydroxymethyltransferase H9J99_04575 PF04055 Radical SAM superfamily H9J99_04575 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family H9J99_04580 PF03099 Biotin/lipoate A/B protein ligase family H9J99_04585 PF04359 Protein of unknown function (DUF493) H9J99_04590 PF07943 Penicillin-binding protein 5, C-terminal domain H9J99_04590 PF00768 D-alanyl-D-alanine carboxypeptidase H9J99_04595 PF03330 Lytic transglycolase H9J99_04595 PF05036 Sporulation related domain H9J99_04600 PF01098 Cell cycle protein H9J99_04605 PF03717 Penicillin-binding Protein dimerisation domain H9J99_04605 PF00905 Penicillin binding protein transpeptidase domain H9J99_04610 PF02590 Predicted SPOUT methyltransferase H9J99_04620 PF14840 Processivity clamp loader gamma complex DNA pol III C-term H9J99_04620 PF06144 DNA polymerase III, delta subunit H9J99_04625 PF04390 Lipopolysaccharide-assembly H9J99_04630 PF00133 tRNA synthetases class I (I, L, M and V) H9J99_04630 PF08264 Anticodon-binding domain of tRNA H9J99_04630 PF13603 Leucyl-tRNA synthetase, Domain 2 H9J99_04635 PF07295 Zinc-ribbon containing domain H9J99_04640 PF00795 Carbon-nitrogen hydrolase H9J99_04645 PF00571 CBS domain H9J99_04645 PF03471 Transporter associated domain H9J99_04650 PF02130 Uncharacterized protein family UPF0054 H9J99_04655 PF02562 PhoH-like protein H9J99_04660 PF04055 Radical SAM superfamily H9J99_04660 PF01938 TRAM domain H9J99_04660 PF00919 Uncharacterized protein family UPF0004 H9J99_04665 PF01494 FAD binding domain H9J99_04780 PF01926 50S ribosome-binding GTPase H9J99_04780 PF06071 Protein of unknown function (DUF933) H9J99_04785 PF01195 Peptidyl-tRNA hydrolase H9J99_04790 PF14572 Phosphoribosyl synthetase-associated domain H9J99_04790 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase H9J99_04795 PF08544 GHMP kinases C terminal H9J99_04795 PF00288 GHMP kinases N terminal domain H9J99_04800 PF03550 Outer membrane lipoprotein LolB H9J99_04805 PF01488 Shikimate / quinate 5-dehydrogenase H9J99_04805 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain H9J99_04805 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain H9J99_04810 PF03462 PCRF domain H9J99_04810 PF00472 RF-1 domain H9J99_04815 PF13847 Methyltransferase domain H9J99_04815 PF17827 PrmC N-terminal domain H9J99_04820 PF04247 Invasion gene expression up-regulator, SirB H9J99_04825 PF13369 Transglutaminase-like superfamily H9J99_04830 PF00793 DAHP synthetase I family H9J99_04835 PF00149 Calcineurin-like phosphoesterase H9J99_04835 PF02872 5'-nucleotidase, C-terminal domain H9J99_04845 PF00849 RNA pseudouridylate synthase H9J99_04845 PF01479 S4 domain H9J99_04850 PF01713 Smr domain H9J99_04870 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain H9J99_04870 PF00728 Glycosyl hydrolase family 20, catalytic domain H9J99_04870 PF02838 Glycosyl hydrolase family 20, domain 2 H9J99_04870 PF03173 Putative carbohydrate binding domain H9J99_04885 PF00403 Heavy-metal-associated domain H9J99_04890 PF13609 Gram-negative porin H9J99_04895 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) H9J99_04900 PF00749 tRNA synthetases class I (E and Q), catalytic domain H9J99_04905 PF00691 OmpA family H9J99_04905 PF01389 OmpA-like transmembrane domain H9J99_04950 PF01584 CheW-like domain H9J99_04950 PF00072 Response regulator receiver domain H9J99_04955 PF01739 CheR methyltransferase, SAM binding domain H9J99_04955 PF03705 CheR methyltransferase, all-alpha domain H9J99_04960 PF00460 Flagella basal body rod protein H9J99_04965 PF00460 Flagella basal body rod protein H9J99_04965 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9J99_04970 PF13860 FlgD Ig-like domain H9J99_04970 PF03963 Flagellar hook capping protein - N-terminal region H9J99_04970 PF13861 FlgD Tudor-like domain H9J99_04975 PF07559 Flagellar basal body protein FlaE H9J99_04975 PF00460 Flagella basal body rod protein H9J99_04975 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9J99_04980 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9J99_04980 PF00460 Flagella basal body rod protein H9J99_04985 PF00460 Flagella basal body rod protein H9J99_04985 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9J99_04990 PF02107 Flagellar L-ring protein H9J99_04995 PF02119 Flagellar P-ring protein H9J99_05000 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase H9J99_05000 PF10135 Rod binding protein H9J99_05005 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9J99_05005 PF07196 Flagellin hook IN motif H9J99_05010 PF00669 Bacterial flagellin N-terminal helical region H9J99_05015 PF00669 Bacterial flagellin N-terminal helical region H9J99_05015 PF07196 Flagellin hook IN motif H9J99_05015 PF00700 Bacterial flagellin C-terminal helical region H9J99_05020 PF00700 Bacterial flagellin C-terminal helical region H9J99_05020 PF00669 Bacterial flagellin N-terminal helical region H9J99_05020 PF07196 Flagellin hook IN motif H9J99_05025 PF00669 Bacterial flagellin N-terminal helical region H9J99_05025 PF07196 Flagellin hook IN motif H9J99_05025 PF00700 Bacterial flagellin C-terminal helical region H9J99_05030 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 H9J99_05035 PF05524 PEP-utilising enzyme, N-terminal H9J99_05035 PF02896 PEP-utilising enzyme, TIM barrel domain H9J99_05035 PF00391 PEP-utilising enzyme, mobile domain H9J99_05040 PF00381 PTS HPr component phosphorylation site H9J99_05045 PF00291 Pyridoxal-phosphate dependent enzyme H9J99_05055 PF04354 ZipA, C-terminal FtsZ-binding domain H9J99_05060 PF00533 BRCA1 C Terminus (BRCT) domain H9J99_05060 PF12826 Helix-hairpin-helix motif H9J99_05060 PF03120 NAD-dependent DNA ligase OB-fold domain H9J99_05060 PF01653 NAD-dependent DNA ligase adenylation domain H9J99_05060 PF03119 NAD-dependent DNA ligase C4 zinc finger domain H9J99_05065 PF03573 outer membrane porin, OprD family H9J99_05080 PF01145 SPFH domain / Band 7 family H9J99_05080 PF16200 C-terminal region of band_7 H9J99_05085 PF11658 Cellulose biosynthesis protein BcsG H9J99_05095 PF10995 Cellulose biosynthesis GIL H9J99_05105 PF06564 Cellulose biosynthesis protein BcsQ H9J99_05110 PF07238 PilZ domain H9J99_05110 PF03552 Cellulose synthase H9J99_05110 PF00535 Glycosyl transferase family 2 H9J99_05115 PF03170 Bacterial cellulose synthase subunit H9J99_05120 PF01270 Glycosyl hydrolases family 8 H9J99_05125 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) H9J99_05130 PF00085 Thioredoxin H9J99_05135 PF00106 short chain dehydrogenase H9J99_05140 PF08338 Domain of unknown function (DUF1731) H9J99_05140 PF01370 NAD dependent epimerase/dehydratase family H9J99_05145 PF07556 Protein of unknown function (DUF1538) H9J99_05150 PF07556 Protein of unknown function (DUF1538) H9J99_05165 PF12850 Calcineurin-like phosphoesterase superfamily domain H9J99_05180 PF17323 Trans-membrane regulatory protein ToxS H9J99_05185 PF00486 Transcriptional regulatory protein, C terminal H9J99_05190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9J99_05190 PF00183 Hsp90 protein H9J99_05195 PF05191 Adenylate kinase, active site lid H9J99_05200 PF00762 Ferrochelatase H9J99_05205 PF00854 POT family H9J99_05210 PF02357 Transcription termination factor nusG H9J99_05220 PF02254 TrkA-N domain H9J99_05220 PF00999 Sodium/hydrogen exchanger family H9J99_05230 PF01979 Amidohydrolase family H9J99_05235 PF00367 phosphotransferase system, EIIB H9J99_05235 PF02378 Phosphotransferase system, EIIC H9J99_05240 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain H9J99_05240 PF00749 tRNA synthetases class I (E and Q), catalytic domain H9J99_05245 PF01475 Ferric uptake regulator family H9J99_05255 PF00258 Flavodoxin H9J99_05265 PF12697 Alpha/beta hydrolase family H9J99_05270 PF03925 SeqA protein C-terminal domain H9J99_05270 PF17206 SeqA protein N-terminal domain H9J99_05275 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H9J99_05275 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H9J99_05275 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H9J99_05275 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H9J99_05290 PF00285 Citrate synthase, C-terminal domain H9J99_05295 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit H9J99_05300 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit H9J99_05305 PF00890 FAD binding domain H9J99_05305 PF02910 Fumarate reductase flavoprotein C-term H9J99_05310 PF13085 2Fe-2S iron-sulfur cluster binding domain H9J99_05315 PF16870 2-oxoglutarate dehydrogenase C-terminal H9J99_05315 PF00676 Dehydrogenase E1 component H9J99_05315 PF02779 Transketolase, pyrimidine binding domain H9J99_05315 PF16078 2-oxoglutarate dehydrogenase N-terminus H9J99_05320 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) H9J99_05320 PF00364 Biotin-requiring enzyme H9J99_05320 PF02817 e3 binding domain H9J99_05325 PF08442 ATP-grasp domain H9J99_05325 PF00549 CoA-ligase H9J99_05330 PF02629 CoA binding domain H9J99_05330 PF00549 CoA-ligase H9J99_05335 PF00950 ABC 3 transport family H9J99_05345 PF01297 Zinc-uptake complex component A periplasmic H9J99_05350 PF02311 AraC-like ligand binding domain H9J99_05350 PF12833 Helix-turn-helix domain H9J99_05355 PF04023 FeoA domain H9J99_05360 PF07670 Nucleoside recognition H9J99_05360 PF02421 Ferrous iron transport protein B H9J99_05360 PF07664 Ferrous iron transport protein B C terminus H9J99_05360 PF17910 FeoB cytosolic helical domain H9J99_05375 PF00750 tRNA synthetases class I (R) H9J99_05375 PF05746 DALR anticodon binding domain H9J99_05375 PF03485 Arginyl tRNA synthetase N terminal domain H9J99_05385 PF00551 Formyl transferase H9J99_05385 PF01842 ACT domain H9J99_05390 PF04851 Type III restriction enzyme, res subunit H9J99_05390 PF13307 Helicase C-terminal domain H9J99_05395 PF00814 Glycoprotease family H9J99_05410 PF00561 alpha/beta hydrolase fold H9J99_05415 PF13193 AMP-binding enzyme C-terminal domain H9J99_05415 PF00501 AMP-binding enzyme H9J99_05420 PF00570 HRDC domain H9J99_05420 PF01612 3'-5' exonuclease H9J99_05430 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain H9J99_05440 PF05166 YcgL domain H9J99_05445 PF13406 Transglycosylase SLT domain H9J99_05450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_05450 PF03466 LysR substrate binding domain H9J99_05455 PF07670 Nucleoside recognition H9J99_05455 PF01773 Na+ dependent nucleoside transporter N-terminus H9J99_05455 PF07662 Na+ dependent nucleoside transporter C-terminus H9J99_05460 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain H9J99_05460 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain H9J99_05470 PF00589 Phage integrase family H9J99_05470 PF02899 Phage integrase, N-terminal SAM-like domain H9J99_05490 PF14490 Helix-hairpin-helix containing domain H9J99_05490 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain H9J99_05490 PF13538 UvrD-like helicase C-terminal domain H9J99_05495 PF02796 Helix-turn-helix domain of resolvase H9J99_05495 PF00239 Resolvase, N terminal domain H9J99_05500 PF12161 HsdM N-terminal domain H9J99_05500 PF02384 N-6 DNA Methylase H9J99_05505 PF01420 Type I restriction modification DNA specificity domain H9J99_05510 PF00271 Helicase conserved C-terminal domain H9J99_05510 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) H9J99_05510 PF04851 Type III restriction enzyme, res subunit H9J99_05510 PF08463 EcoEI R protein C-terminal H9J99_05540 PF00109 Beta-ketoacyl synthase, N-terminal domain H9J99_05540 PF02801 Beta-ketoacyl synthase, C-terminal domain H9J99_05550 PF07977 FabA-like domain H9J99_05555 PF02801 Beta-ketoacyl synthase, C-terminal domain H9J99_05555 PF00109 Beta-ketoacyl synthase, N-terminal domain H9J99_05580 PF00221 Aromatic amino acid lyase H9J99_05585 PF00535 Glycosyl transferase family 2 H9J99_05590 PF07977 FabA-like domain H9J99_05605 PF00550 Phosphopantetheine attachment site H9J99_05610 PF00550 Phosphopantetheine attachment site H9J99_05635 PF04820 Tryptophan halogenase H9J99_05645 PF00571 CBS domain H9J99_05645 PF01595 Cyclin M transmembrane N-terminal domain H9J99_05645 PF03471 Transporter associated domain H9J99_05650 PF00271 Helicase conserved C-terminal domain H9J99_05650 PF00270 DEAD/DEAH box helicase H9J99_05655 PF02254 TrkA-N domain H9J99_05655 PF02080 TrkA-C domain H9J99_05660 PF02386 Cation transport protein H9J99_05675 PF02696 Uncharacterized ACR, YdiU/UPF0061 family H9J99_05680 PF03480 Bacterial extracellular solute-binding protein, family 7 H9J99_05685 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component H9J99_05690 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component H9J99_05700 PF00072 Response regulator receiver domain H9J99_05700 PF02954 Bacterial regulatory protein, Fis family H9J99_05700 PF00158 Sigma-54 interaction domain H9J99_05705 PF02743 Cache domain H9J99_05705 PF00512 His Kinase A (phospho-acceptor) domain H9J99_05705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9J99_05715 PF05697 Bacterial trigger factor protein (TF) H9J99_05715 PF05698 Bacterial trigger factor protein (TF) C-terminus H9J99_05715 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H9J99_05720 PF00574 Clp protease H9J99_05725 PF06689 ClpX C4-type zinc finger H9J99_05725 PF10431 C-terminal, D2-small domain, of ClpB protein H9J99_05725 PF07724 AAA domain (Cdc48 subfamily) H9J99_05730 PF02190 ATP-dependent protease La (LON) substrate-binding domain H9J99_05730 PF05362 Lon protease (S16) C-terminal proteolytic domain H9J99_05730 PF00004 ATPase family associated with various cellular activities (AAA) H9J99_05735 PF00216 Bacterial DNA-binding protein H9J99_05740 PF13145 PPIC-type PPIASE domain H9J99_05760 PF01966 HD domain H9J99_05760 PF13286 Phosphohydrolase-associated domain H9J99_05770 PF00155 Aminotransferase class I and II H9J99_05775 PF00425 chorismate binding enzyme H9J99_05780 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain H9J99_05780 PF16582 Middle domain of thiamine pyrophosphate H9J99_05780 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain H9J99_05785 PF12697 Alpha/beta hydrolase family H9J99_05790 PF00378 Enoyl-CoA hydratase/isomerase H9J99_05795 PF13378 Enolase C-terminal domain-like H9J99_05800 PF13193 AMP-binding enzyme C-terminal domain H9J99_05800 PF00501 AMP-binding enzyme H9J99_05810 PF03601 Conserved hypothetical protein 698 H9J99_05815 PF07690 Major Facilitator Superfamily H9J99_05860 PF13533 Biotin-lipoyl like H9J99_05865 PF00873 AcrB/AcrD/AcrF family H9J99_05935 PF00199 Catalase H9J99_05935 PF06628 Catalase-related immune-responsive H9J99_05950 PF00210 Ferritin-like domain H9J99_05955 PF02954 Bacterial regulatory protein, Fis family H9J99_05955 PF00072 Response regulator receiver domain H9J99_05955 PF00158 Sigma-54 interaction domain H9J99_05970 PF10609 NUBPL iron-transfer P-loop NTPase H9J99_05970 PF01883 Iron-sulfur cluster assembly protein H9J99_05985 PF00753 Metallo-beta-lactamase superfamily H9J99_05985 PF16123 Hydroxyacylglutathione hydrolase C-terminus H9J99_05990 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9J99_05990 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H9J99_06010 PF13737 Transposase DDE domain H9J99_06020 PF12833 Helix-turn-helix domain H9J99_06025 PF00440 Bacterial regulatory proteins, tetR family H9J99_06035 PF00440 Bacterial regulatory proteins, tetR family H9J99_06035 PF02909 Tetracyclin repressor-like, C-terminal domain H9J99_06065 PF13411 MerR HTH family regulatory protein H9J99_06110 PF00291 Pyridoxal-phosphate dependent enzyme H9J99_06115 PF13404 AsnC-type helix-turn-helix domain H9J99_06115 PF01037 Lrp/AsnC ligand binding domain H9J99_06130 PF09619 Type III secretion system lipoprotein chaperone (YscW) H9J99_06135 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain H9J99_06145 PF00990 Diguanylate cyclase, GGDEF domain H9J99_06145 PF17152 Periplasmic sensor domain H9J99_06155 PF00588 SpoU rRNA Methylase family H9J99_06155 PF08032 RNA 2'-O ribose methyltransferase substrate binding H9J99_06160 PF00037 4Fe-4S binding domain H9J99_06160 PF11953 Domain of unknown function (DUF3470) H9J99_06170 PF00571 CBS domain H9J99_06170 PF00478 IMP dehydrogenase / GMP reductase domain H9J99_06175 PF00403 Heavy-metal-associated domain H9J99_06180 PF01048 Phosphorylase superfamily H9J99_06190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9J99_06190 PF00672 HAMP domain H9J99_06195 PF01230 HIT domain H9J99_06210 PF13036 Peptidoglycan-synthase activator LpoB H9J99_06210 PF08139 Prokaryotic membrane lipoprotein lipid attachment site H9J99_06220 PF05728 Uncharacterised protein family (UPF0227) H9J99_06225 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9J99_06240 PF17757 UvrB interaction domain H9J99_06240 PF03461 TRCF domain H9J99_06240 PF00271 Helicase conserved C-terminal domain H9J99_06240 PF00270 DEAD/DEAH box helicase H9J99_06240 PF02559 CarD-like/TRCF domain H9J99_06250 PF12704 MacB-like periplasmic core domain H9J99_06250 PF02687 FtsX-like permease family H9J99_06255 PF00005 ABC transporter H9J99_06260 PF02687 FtsX-like permease family H9J99_06260 PF12704 MacB-like periplasmic core domain H9J99_06275 PF00664 ABC transporter transmembrane region H9J99_06275 PF00005 ABC transporter H9J99_06280 PF02606 Tetraacyldisaccharide-1-P 4'-kinase H9J99_06285 PF03966 Trm112p-like protein H9J99_06290 PF02348 Cytidylyltransferase H9J99_06295 PF04293 SpoVR like protein H9J99_06300 PF04285 Protein of unknown function (DUF444) H9J99_06305 PF08298 PrkA AAA domain H9J99_06305 PF06798 PrkA serine protein kinase C-terminal domain H9J99_06310 PF03887 YfbU domain H9J99_06320 PF04055 Radical SAM superfamily H9J99_06330 PF02901 Pyruvate formate lyase-like H9J99_06330 PF01228 Glycine radical H9J99_06345 PF00005 ABC transporter H9J99_06350 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9J99_06355 PF00528 Binding-protein-dependent transport system inner membrane component H9J99_06360 PF00528 Binding-protein-dependent transport system inner membrane component H9J99_06370 PF03372 Endonuclease/Exonuclease/phosphatase family H9J99_06375 PF10689 Protein of unknown function (DUF2496) H9J99_06380 PF07445 Primosomal replication protein priC H9J99_06385 PF01925 Sulfite exporter TauE/SafE H9J99_06390 PF06733 DEAD_2 H9J99_06390 PF13307 Helicase C-terminal domain H9J99_06400 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) H9J99_06405 PF00849 RNA pseudouridylate synthase H9J99_06410 PF03971 Monomeric isocitrate dehydrogenase H9J99_06415 PF00313 'Cold-shock' DNA-binding domain H9J99_06420 PF02617 ATP-dependent Clp protease adaptor protein ClpS H9J99_06425 PF10431 C-terminal, D2-small domain, of ClpB protein H9J99_06425 PF02861 Clp amino terminal domain, pathogenicity island component H9J99_06425 PF17871 AAA lid domain H9J99_06425 PF07724 AAA domain (Cdc48 subfamily) H9J99_06425 PF00004 ATPase family associated with various cellular activities (AAA) H9J99_06435 PF01176 Translation initiation factor 1A / IF-1 H9J99_06440 PF04376 Arginine-tRNA-protein transferase, N terminus H9J99_06440 PF04377 Arginine-tRNA-protein transferase, C terminus H9J99_06445 PF03588 Leucyl/phenylalanyl-tRNA protein transferase H9J99_06455 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) H9J99_06460 PF10692 Protein of unknown function (DUF2498) H9J99_06465 PF08272 Topoisomerase I zinc-ribbon-like H9J99_06465 PF01396 Topoisomerase DNA binding C4 zinc finger H9J99_06465 PF01751 Toprim domain H9J99_06465 PF01131 DNA topoisomerase H9J99_06470 PF00483 Nucleotidyl transferase H9J99_06475 PF00534 Glycosyl transferases group 1 H9J99_06475 PF08323 Starch synthase catalytic domain H9J99_06495 PF04994 TfoX C-terminal domain H9J99_06495 PF04993 TfoX N-terminal domain H9J99_06500 PF00356 Bacterial regulatory proteins, lacI family H9J99_06505 PF02613 Nitrate reductase delta subunit H9J99_06510 PF00072 Response regulator receiver domain H9J99_06510 PF00486 Transcriptional regulatory protein, C terminal H9J99_06515 PF02698 DUF218 domain H9J99_06520 PF13847 Methyltransferase domain H9J99_06525 PF03882 MukF winged-helix domain H9J99_06525 PF17193 MukF C-terminal domain H9J99_06525 PF17192 MukF middle domain H9J99_06530 PF04288 MukE-like family H9J99_06535 PF04310 MukB N-terminal H9J99_06535 PF16330 MukB hinge domain H9J99_06545 PF08443 RimK-like ATP-grasp domain H9J99_06545 PF18030 RimK PreATP-grasp domain H9J99_06555 PF08443 RimK-like ATP-grasp domain H9J99_06555 PF18030 RimK PreATP-grasp domain H9J99_06560 PF08003 Protein of unknown function (DUF1698) H9J99_06565 PF13649 Methyltransferase domain H9J99_06570 PF01904 Protein of unknown function DUF72 H9J99_06575 PF02938 GAD domain H9J99_06575 PF00152 tRNA synthetases class II (D, K and N) H9J99_06575 PF01336 OB-fold nucleic acid binding domain H9J99_06580 PF02075 Crossover junction endodeoxyribonuclease RuvC H9J99_06585 PF00672 HAMP domain H9J99_06585 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9J99_06585 PF02203 Tar ligand binding domain homologue H9J99_06590 PF07499 RuvA, C-terminal domain H9J99_06590 PF01330 RuvA N terminal domain H9J99_06595 PF17864 RuvB AAA lid domain H9J99_06595 PF05491 RuvB C-terminal winged helix domain H9J99_06595 PF05496 Holliday junction DNA helicase RuvB P-loop domain H9J99_06600 PF01654 Cytochrome bd terminal oxidase subunit I H9J99_06605 PF02322 Cytochrome bd terminal oxidase subunit II H9J99_06610 PF08173 Membrane bound YbgT-like protein H9J99_06620 PF03061 Thioesterase superfamily H9J99_06625 PF01618 MotA/TolQ/ExbB proton channel family H9J99_06630 PF02472 Biopolymer transport protein ExbD/TolR H9J99_06640 PF07676 WD40-like Beta Propeller Repeat H9J99_06640 PF04052 TolB amino-terminal domain H9J99_06645 PF00691 OmpA family H9J99_06650 PF16331 TolA binding protein trimerisation H9J99_06650 PF13174 Tetratricopeptide repeat H9J99_06655 PF02445 Quinolinate synthetase A protein H9J99_06665 PF03994 Domain of Unknown Function (DUF350) H9J99_06675 PF03738 Glutathionylspermidine synthase preATP-grasp H9J99_06685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9J99_06685 PF00072 Response regulator receiver domain H9J99_06685 PF00512 His Kinase A (phospho-acceptor) domain H9J99_06685 PF09308 LuxQ, periplasmic H9J99_06690 PF06610 L-alanine exporter H9J99_06695 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H9J99_06695 PF01610 Transposase H9J99_06695 PF13542 Helix-turn-helix domain of transposase family ISL3 H9J99_06705 PF00672 HAMP domain H9J99_06705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9J99_06705 PF12729 Four helix bundle sensory module for signal transduction H9J99_06710 PF00529 HlyD membrane-fusion protein of T1SS H9J99_06710 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9J99_06715 PF00873 AcrB/AcrD/AcrF family H9J99_06730 PF00579 tRNA synthetases class I (W and Y) H9J99_06740 PF03372 Endonuclease/Exonuclease/phosphatase family H9J99_06745 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) H9J99_06755 PF03466 LysR substrate binding domain H9J99_06755 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_06765 PF01262 Alanine dehydrogenase/PNT, C-terminal domain H9J99_06765 PF05222 Alanine dehydrogenase/PNT, N-terminal domain H9J99_06770 PF01037 Lrp/AsnC ligand binding domain H9J99_06775 PF01580 FtsK/SpoIIIE family H9J99_06775 PF13491 4TM region of DNA translocase FtsK/SpoIIIE H9J99_06775 PF17854 FtsK alpha domain H9J99_06775 PF09397 Ftsk gamma domain H9J99_06780 PF03548 Outer membrane lipoprotein carrier protein LolA H9J99_06785 PF16193 AAA C-terminal domain H9J99_06785 PF12002 MgsA AAA+ ATPase C terminal H9J99_06785 PF00004 ATPase family associated with various cellular activities (AAA) H9J99_06790 PF02403 Seryl-tRNA synthetase N-terminal domain H9J99_06790 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) H9J99_06805 PF01258 Prokaryotic dksA/traR C4-type zinc finger H9J99_06810 PF00202 Aminotransferase class-III H9J99_06815 PF06968 Biotin and Thiamin Synthesis associated domain H9J99_06815 PF04055 Radical SAM superfamily H9J99_06825 PF08241 Methyltransferase domain H9J99_06840 PF01435 Peptidase family M48 H9J99_06850 PF00106 short chain dehydrogenase H9J99_06885 PF08328 Adenylosuccinate lyase C-terminal H9J99_06885 PF00206 Lyase H9J99_06890 PF04356 Protein of unknown function (DUF489) H9J99_06905 PF00294 pfkB family carbohydrate kinase H9J99_06915 PF00816 H-NS histone family H9J99_06920 PF03553 Na+/H+ antiporter family H9J99_06930 PF02954 Bacterial regulatory protein, Fis family H9J99_06930 PF00072 Response regulator receiver domain H9J99_06930 PF00158 Sigma-54 interaction domain H9J99_06935 PF08029 HisG, C-terminal domain H9J99_06935 PF01634 ATP phosphoribosyltransferase H9J99_06940 PF00815 Histidinol dehydrogenase H9J99_06945 PF00155 Aminotransferase class I and II H9J99_06950 PF00475 Imidazoleglycerol-phosphate dehydratase H9J99_06950 PF08645 Polynucleotide kinase 3 phosphatase H9J99_06955 PF00117 Glutamine amidotransferase class-I H9J99_06960 PF00977 Histidine biosynthesis protein H9J99_06965 PF00977 Histidine biosynthesis protein H9J99_06970 PF01502 Phosphoribosyl-AMP cyclohydrolase H9J99_06970 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase H9J99_06975 PF02810 SEC-C motif H9J99_06980 PF00563 EAL domain H9J99_06980 PF08668 HDOD domain H9J99_06985 PF00149 Calcineurin-like phosphoesterase H9J99_06990 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD H9J99_06995 PF09190 DALR domain H9J99_06995 PF01406 tRNA synthetases class I (C) catalytic domain H9J99_07000 PF00265 Thymidine kinase H9J99_07005 PF02698 DUF218 domain H9J99_07030 PF01226 Formate/nitrite transporter H9J99_07045 PF03649 Uncharacterised protein family (UPF0014) H9J99_07050 PF06796 Periplasmic nitrate reductase protein NapE H9J99_07055 PF03264 NapC/NirT cytochrome c family, N-terminal region H9J99_07060 PF00384 Molybdopterin oxidoreductase H9J99_07060 PF18364 Molybdopterin oxidoreductase N-terminal domain H9J99_07060 PF01568 Molydopterin dinucleotide binding domain H9J99_07065 PF16874 Glycosyl hydrolase family 36 C-terminal domain H9J99_07065 PF16875 Glycosyl hydrolase family 36 N-terminal domain H9J99_07075 PF01368 DHH family H9J99_07075 PF02833 DHHA2 domain H9J99_07085 PF00005 ABC transporter H9J99_07090 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9J99_07090 PF00005 ABC transporter H9J99_07095 PF00528 Binding-protein-dependent transport system inner membrane component H9J99_07095 PF12911 N-terminal TM domain of oligopeptide transport permease C H9J99_07100 PF00528 Binding-protein-dependent transport system inner membrane component H9J99_07105 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9J99_07110 PF02954 Bacterial regulatory protein, Fis family H9J99_07110 PF00158 Sigma-54 interaction domain H9J99_07115 PF04012 PspA/IM30 family H9J99_07120 PF06667 Phage shock protein B H9J99_07125 PF04024 PspC domain H9J99_07130 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9J99_07135 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9J99_07140 PF00873 AcrB/AcrD/AcrF family H9J99_07145 PF03352 Methyladenine glycosylase H9J99_07150 PF03280 Proteobacterial lipase chaperone protein H9J99_07155 PF00561 alpha/beta hydrolase fold H9J99_07160 PF01053 Cys/Met metabolism PLP-dependent enzyme H9J99_07165 PF13091 PLD-like domain H9J99_07165 PF13396 Phospholipase_D-nuclease N-terminal H9J99_07170 PF00209 Sodium:neurotransmitter symporter family H9J99_07175 PF12729 Four helix bundle sensory module for signal transduction H9J99_07175 PF00672 HAMP domain H9J99_07175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9J99_07180 PF00849 RNA pseudouridylate synthase H9J99_07190 PF00970 Oxidoreductase FAD-binding domain H9J99_07190 PF00111 2Fe-2S iron-sulfur cluster binding domain H9J99_07190 PF00175 Oxidoreductase NAD-binding domain H9J99_07195 PF03063 Prismane/CO dehydrogenase family H9J99_07200 PF01590 GAF domain H9J99_07200 PF00158 Sigma-54 interaction domain H9J99_07210 PF01066 CDP-alcohol phosphatidyltransferase H9J99_07215 PF00005 ABC transporter H9J99_07220 PF00528 Binding-protein-dependent transport system inner membrane component H9J99_07225 PF13416 Bacterial extracellular solute-binding protein H9J99_07230 PF09335 SNARE associated Golgi protein H9J99_07240 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster H9J99_07240 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9J99_07250 PF00512 His Kinase A (phospho-acceptor) domain H9J99_07250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9J99_07255 PF00072 Response regulator receiver domain H9J99_07255 PF00196 Bacterial regulatory proteins, luxR family H9J99_07265 PF06945 Protein of unknown function (DUF1289) H9J99_07275 PF00149 Calcineurin-like phosphoesterase H9J99_07275 PF02872 5'-nucleotidase, C-terminal domain H9J99_07290 PF01386 Ribosomal L25p family H9J99_07295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9J99_07300 PF00486 Transcriptional regulatory protein, C terminal H9J99_07300 PF00072 Response regulator receiver domain H9J99_07310 PF00271 Helicase conserved C-terminal domain H9J99_07310 PF04851 Type III restriction enzyme, res subunit H9J99_07315 PF00849 RNA pseudouridylate synthase H9J99_07315 PF01479 S4 domain H9J99_07320 PF07690 Major Facilitator Superfamily H9J99_07330 PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB H9J99_07335 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) H9J99_07350 PF03264 NapC/NirT cytochrome c family, N-terminal region H9J99_07355 PF11066 Protein of unknown function (DUF2867) H9J99_07355 PF13460 NAD(P)H-binding H9J99_07360 PF01554 MatE H9J99_07365 PF00005 ABC transporter H9J99_07380 PF06965 Na+/H+ antiporter 1 H9J99_07385 PF00440 Bacterial regulatory proteins, tetR family H9J99_07385 PF16295 Tetracyclin repressor-like, C-terminal domain H9J99_07390 PF02770 Acyl-CoA dehydrogenase, middle domain H9J99_07390 PF09317 Domain of unknown function (DUF1974) H9J99_07390 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H9J99_07390 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H9J99_07395 PF07055 Enoyl reductase FAD binding domain H9J99_07395 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase H9J99_07395 PF12241 Trans-2-enoyl-CoA reductase catalytic region H9J99_07400 PF02080 TrkA-C domain H9J99_07400 PF06826 Predicted Permease Membrane Region H9J99_07405 PF00462 Glutaredoxin H9J99_07410 PF00465 Iron-containing alcohol dehydrogenase H9J99_07420 PF01380 SIS domain H9J99_07420 PF01418 Helix-turn-helix domain, rpiR family H9J99_07425 PF00282 Pyridoxal-dependent decarboxylase conserved domain H9J99_07435 PF03956 Lysine exporter LysO H9J99_07460 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9J99_07460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9J99_07460 PF00512 His Kinase A (phospho-acceptor) domain H9J99_07470 PF00266 Aminotransferase class-V H9J99_07475 PF00291 Pyridoxal-phosphate dependent enzyme H9J99_07480 PF00005 ABC transporter H9J99_07480 PF00664 ABC transporter transmembrane region H9J99_07485 PF00005 ABC transporter H9J99_07485 PF00664 ABC transporter transmembrane region H9J99_07490 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9J99_07500 PF00266 Aminotransferase class-V H9J99_07510 PF00072 Response regulator receiver domain H9J99_07510 PF00990 Diguanylate cyclase, GGDEF domain H9J99_07515 PF00939 Sodium:sulfate symporter transmembrane region H9J99_07520 PF02698 DUF218 domain H9J99_07525 PF03949 Malic enzyme, NAD binding domain H9J99_07525 PF00390 Malic enzyme, N-terminal domain H9J99_07530 PF04408 Helicase associated domain (HA2) H9J99_07530 PF00270 DEAD/DEAH box helicase H9J99_07530 PF00271 Helicase conserved C-terminal domain H9J99_07530 PF08482 ATP-dependent helicase C-terminal H9J99_07535 PF02253 Phospholipase A1 H9J99_07545 PF16655 PhoD-like phosphatase, N-terminal domain H9J99_07545 PF09423 PhoD-like phosphatase H9J99_07550 PF01259 SAICAR synthetase H9J99_07570 PF05736 OprF membrane domain H9J99_07570 PF00691 OmpA family H9J99_07585 PF02913 FAD linked oxidases, C-terminal domain H9J99_07585 PF01565 FAD binding domain H9J99_07585 PF13183 4Fe-4S dicluster domain H9J99_07590 PF04191 Phospholipid methyltransferase H9J99_07600 PF00221 Aromatic amino acid lyase H9J99_07605 PF01175 Urocanase Rossmann-like domain H9J99_07605 PF17391 Urocanase N-terminal domain H9J99_07605 PF17392 Urocanase C-terminal domain H9J99_07615 PF01979 Amidohydrolase family H9J99_07620 PF00392 Bacterial regulatory proteins, gntR family H9J99_07620 PF07702 UTRA domain H9J99_07635 PF03129 Anticodon binding domain H9J99_07635 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain H9J99_07635 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) H9J99_07635 PF02824 TGS domain H9J99_07640 PF05198 Translation initiation factor IF-3, N-terminal domain H9J99_07640 PF00707 Translation initiation factor IF-3, C-terminal domain H9J99_07645 PF01632 Ribosomal protein L35 H9J99_07650 PF00453 Ribosomal protein L20 H9J99_07655 PF01906 Putative heavy-metal-binding H9J99_07685 PF17158 Membrane-associated sensor, integral membrane domain H9J99_07685 PF00990 Diguanylate cyclase, GGDEF domain H9J99_07690 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain H9J99_07690 PF01409 tRNA synthetases class II core domain (F) H9J99_07695 PF03484 tRNA synthetase B5 domain H9J99_07695 PF03483 B3/4 domain H9J99_07695 PF01588 Putative tRNA binding domain H9J99_07695 PF03147 Ferredoxin-fold anticodon binding domain H9J99_07695 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain H9J99_07705 PF00216 Bacterial DNA-binding protein H9J99_07715 PF05724 Thiopurine S-methyltransferase (TPMT) H9J99_07720 PF02222 ATP-grasp domain H9J99_07725 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region H9J99_07725 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region H9J99_07730 PF04172 LrgB-like family H9J99_07735 PF03788 LrgA family H9J99_07740 PF00929 Exonuclease H9J99_07740 PF08411 Exonuclease C-terminal H9J99_07750 PF13460 NAD(P)H-binding H9J99_07760 PF02277 Phosphoribosyltransferase H9J99_07765 PF02654 Cobalamin-5-phosphate synthase H9J99_07770 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase H9J99_07785 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family H9J99_07790 PF01032 FecCD transport family H9J99_07795 PF00005 ABC transporter H9J99_07815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_07815 PF03466 LysR substrate binding domain H9J99_07835 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase H9J99_07840 PF16363 GDP-mannose 4,6 dehydratase H9J99_07845 PF04991 LicD family H9J99_07850 PF01863 Protein of unknown function DUF45 H9J99_07855 PF05971 RNA methyltransferase H9J99_07875 PF00392 Bacterial regulatory proteins, gntR family H9J99_07880 PF00171 Aldehyde dehydrogenase family H9J99_07885 PF05544 Proline racemase H9J99_07900 PF02423 Ornithine cyclodeaminase/mu-crystallin family H9J99_07905 PF00701 Dihydrodipicolinate synthetase family H9J99_07910 PF00005 ABC transporter H9J99_07910 PF08402 TOBE domain H9J99_07915 PF00528 Binding-protein-dependent transport system inner membrane component H9J99_07920 PF00528 Binding-protein-dependent transport system inner membrane component H9J99_07930 PF01752 Collagenase H9J99_07930 PF08453 Peptidase family M9 N-terminal H9J99_07945 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9J99_07945 PF00005 ABC transporter H9J99_07950 PF00005 ABC transporter H9J99_07950 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9J99_07955 PF00528 Binding-protein-dependent transport system inner membrane component H9J99_07955 PF12911 N-terminal TM domain of oligopeptide transport permease C H9J99_07960 PF00528 Binding-protein-dependent transport system inner membrane component H9J99_07965 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9J99_07970 PF07687 Peptidase dimerisation domain H9J99_07970 PF01546 Peptidase family M20/M25/M40 H9J99_07980 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H9J99_07985 PF04209 homogentisate 1,2-dioxygenase H9J99_07995 PF14497 Glutathione S-transferase, C-terminal domain H9J99_07995 PF02798 Glutathione S-transferase, N-terminal domain H9J99_08030 PF13936 Helix-turn-helix domain H9J99_08030 PF00665 Integrase core domain H9J99_08045 PF00313 'Cold-shock' DNA-binding domain H9J99_08060 PF08206 Ribonuclease B OB domain H9J99_08060 PF00575 S1 RNA binding domain H9J99_08060 PF08461 Ribonuclease R winged-helix domain H9J99_08060 PF00773 RNB domain H9J99_08060 PF17876 Cold shock domain H9J99_08080 PF00300 Histidine phosphatase superfamily (branch 1) H9J99_08095 PF00939 Sodium:sulfate symporter transmembrane region H9J99_08100 PF00512 His Kinase A (phospho-acceptor) domain H9J99_08100 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9J99_08100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9J99_08105 PF02954 Bacterial regulatory protein, Fis family H9J99_08105 PF00072 Response regulator receiver domain H9J99_08105 PF00158 Sigma-54 interaction domain H9J99_08110 PF00563 EAL domain H9J99_08110 PF00990 Diguanylate cyclase, GGDEF domain H9J99_08110 PF03707 Bacterial signalling protein N terminal repeat H9J99_08115 PF01966 HD domain H9J99_08115 PF11871 Domain of unknown function (DUF3391) H9J99_08120 PF01810 LysE type translocator H9J99_08125 PF11230 Protein of unknown function (DUF3029) H9J99_08130 PF04055 Radical SAM superfamily H9J99_08140 PF03741 Integral membrane protein TerC family H9J99_08150 PF00884 Sulfatase H9J99_08155 PF08521 Two-component sensor kinase N-terminal H9J99_08155 PF00512 His Kinase A (phospho-acceptor) domain H9J99_08155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9J99_08160 PF00072 Response regulator receiver domain H9J99_08160 PF00486 Transcriptional regulatory protein, C terminal H9J99_08180 PF00501 AMP-binding enzyme H9J99_08190 PF04069 Substrate binding domain of ABC-type glycine betaine transport system H9J99_08195 PF00528 Binding-protein-dependent transport system inner membrane component H9J99_08200 PF00571 CBS domain H9J99_08200 PF00005 ABC transporter H9J99_08215 PF02028 BCCT, betaine/carnitine/choline family transporter H9J99_08220 PF00583 Acetyltransferase (GNAT) family H9J99_08225 PF00202 Aminotransferase class-III H9J99_08230 PF06339 Ectoine synthase H9J99_08235 PF00696 Amino acid kinase family H9J99_08235 PF13840 ACT domain H9J99_08260 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9J99_08275 PF17203 Single cache domain 3 H9J99_08275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9J99_08275 PF00989 PAS fold H9J99_08275 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain H9J99_08280 PF00072 Response regulator receiver domain H9J99_08280 PF12431 Transcriptional regulator H9J99_08285 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain H9J99_08285 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain H9J99_08290 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase H9J99_08295 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain H9J99_08295 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H9J99_08310 PF00158 Sigma-54 interaction domain H9J99_08310 PF02954 Bacterial regulatory protein, Fis family H9J99_08310 PF01590 GAF domain H9J99_08315 PF00171 Aldehyde dehydrogenase family H9J99_08335 PF12833 Helix-turn-helix domain H9J99_08350 PF03958 Bacterial type II/III secretion system short domain H9J99_08350 PF00263 Bacterial type II and III secretion system protein H9J99_08355 PF16697 Inner membrane component of T3SS, cytoplasmic domain H9J99_08355 PF16693 Inner membrane component of T3SS, periplasmic domain H9J99_08365 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF H9J99_08370 PF09477 Bacterial type II secretion system chaperone protein (type_III_yscG) H9J99_08380 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI H9J99_08385 PF01514 Secretory protein of YscJ/FliF family H9J99_08395 PF02108 Flagellar assembly protein FliH H9J99_08405 PF02661 Fic/DOC family H9J99_08430 PF01312 FlhB HrpN YscU SpaS Family H9J99_08435 PF01311 Bacterial export proteins, family 1 H9J99_08440 PF01313 Bacterial export proteins, family 3 H9J99_08445 PF00813 FliP family H9J99_08450 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term H9J99_08465 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H9J99_08465 PF02874 ATP synthase alpha/beta family, beta-barrel domain H9J99_08465 PF18269 T3SS EscN ATPase C-terminal domain H9J99_08470 PF07201 HrpJ-like domain H9J99_08475 PF09059 TyeA H9J99_08495 PF00771 FHIPEP family H9J99_08505 PF07216 LcrG protein H9J99_08510 PF04792 V antigen (LcrV) protein H9J99_08515 PF07720 Tetratricopeptide repeat H9J99_08525 PF05844 YopD protein H9J99_08535 PF01925 Sulfite exporter TauE/SafE H9J99_08540 PF01970 Tripartite tricarboxylate transporter TctA family H9J99_08570 PF00285 Citrate synthase, C-terminal domain H9J99_08575 PF00694 Aconitase C-terminal domain H9J99_08575 PF00330 Aconitase family (aconitate hydratase) H9J99_08580 PF04303 PrpF protein H9J99_08585 PF16177 Acetyl-coenzyme A synthetase N-terminus H9J99_08585 PF13193 AMP-binding enzyme C-terminal domain H9J99_08585 PF00501 AMP-binding enzyme H9J99_08595 PF00089 Trypsin H9J99_08610 PF04055 Radical SAM superfamily H9J99_08615 PF06508 Queuosine biosynthesis protein QueC H9J99_08620 PF17158 Membrane-associated sensor, integral membrane domain H9J99_08620 PF00990 Diguanylate cyclase, GGDEF domain H9J99_08630 PF00691 OmpA family H9J99_08630 PF05736 OprF membrane domain H9J99_08645 PF00691 OmpA family H9J99_08645 PF05736 OprF membrane domain H9J99_08660 PF17785 PUA-like domain H9J99_08660 PF10672 S-adenosylmethionine-dependent methyltransferase H9J99_08665 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9J99_08665 PF00672 HAMP domain H9J99_08665 PF02743 Cache domain H9J99_08670 PF00708 Acylphosphatase H9J99_08675 PF04358 DsrC like protein H9J99_08685 PF01027 Inhibitor of apoptosis-promoting Bax1 H9J99_08690 PF00005 ABC transporter H9J99_08695 PF00528 Binding-protein-dependent transport system inner membrane component H9J99_08700 PF00528 Binding-protein-dependent transport system inner membrane component H9J99_08705 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9J99_08710 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H9J99_08710 PF14824 Sirohaem biosynthesis protein central H9J99_08710 PF10414 Sirohaem synthase dimerisation region H9J99_08715 PF04461 Protein of unknown function (DUF520) H9J99_08720 PF00793 DAHP synthetase I family H9J99_08740 PF01189 16S rRNA methyltransferase RsmB/F H9J99_08740 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF H9J99_08740 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF H9J99_08750 PF04403 Paraquat-inducible protein A H9J99_08755 PF00664 ABC transporter transmembrane region H9J99_08755 PF00005 ABC transporter H9J99_08760 PF13185 GAF domain H9J99_08765 PF17516 ProQ C-terminal domain H9J99_08765 PF04352 ProQ/FINO family H9J99_08770 PF11818 C-terminal domain of tail specific protease (DUF3340) H9J99_08770 PF00595 PDZ domain H9J99_08770 PF03572 Peptidase family S41 H9J99_08770 PF17804 Tail specific protease N-terminal domain H9J99_08780 PF11940 Domain of unknown function (DUF3458) Ig-like fold H9J99_08780 PF17432 Domain of unknown function (DUF3458_C) ARM repeats H9J99_08780 PF01433 Peptidase family M1 domain H9J99_08795 PF01180 Dihydroorotate dehydrogenase H9J99_08800 PF07126 Cell-division protein ZapC H9J99_08805 PF10672 S-adenosylmethionine-dependent methyltransferase H9J99_08805 PF02926 THUMP domain H9J99_08805 PF01170 Putative RNA methylase family UPF0020 H9J99_08815 PF00005 ABC transporter H9J99_08815 PF12848 ABC transporter H9J99_08815 PF16326 ABC transporter C-terminal domain H9J99_08825 PF04957 Ribosome modulation factor H9J99_08830 PF07977 FabA-like domain H9J99_08835 PF13654 AAA domain H9J99_08835 PF05362 Lon protease (S16) C-terminal proteolytic domain H9J99_08840 PF06303 MatP N-terminal domain H9J99_08840 PF17414 MatP C-terminal ribbon-helix-helix domain H9J99_08860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9J99_08860 PF00512 His Kinase A (phospho-acceptor) domain H9J99_08860 PF09308 LuxQ, periplasmic H9J99_08860 PF00072 Response regulator receiver domain H9J99_08875 PF00115 Cytochrome C and Quinol oxidase polypeptide I H9J99_08890 PF13442 Cytochrome C oxidase, cbb3-type, subunit III H9J99_08890 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP H9J99_08900 PF00403 Heavy-metal-associated domain H9J99_08915 PF13545 Crp-like helix-turn-helix domain H9J99_08915 PF00027 Cyclic nucleotide-binding domain H9J99_08920 PF00582 Universal stress protein family H9J99_08925 PF01171 PP-loop family H9J99_08945 PF08402 TOBE domain H9J99_08945 PF00005 ABC transporter H9J99_08950 PF00528 Binding-protein-dependent transport system inner membrane component H9J99_08955 PF00528 Binding-protein-dependent transport system inner membrane component H9J99_08960 PF13416 Bacterial extracellular solute-binding protein H9J99_08965 PF13416 Bacterial extracellular solute-binding protein H9J99_08970 PF02146 Sir2 family H9J99_08980 PF00909 Ammonium Transporter Family H9J99_09015 PF01610 Transposase H9J99_09015 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H9J99_09015 PF13542 Helix-turn-helix domain of transposase family ISL3 H9J99_09030 PF13247 4Fe-4S dicluster domain H9J99_09035 PF01568 Molydopterin dinucleotide binding domain H9J99_09035 PF00384 Molybdopterin oxidoreductase H9J99_09035 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H9J99_09045 PF02613 Nitrate reductase delta subunit H9J99_09065 PF02634 FdhD/NarQ family H9J99_09070 PF12848 ABC transporter H9J99_09070 PF00005 ABC transporter H9J99_09080 PF00158 Sigma-54 interaction domain H9J99_09080 PF00072 Response regulator receiver domain H9J99_09080 PF02954 Bacterial regulatory protein, Fis family H9J99_09085 PF12849 PBP superfamily domain H9J99_09090 PF00528 Binding-protein-dependent transport system inner membrane component H9J99_09095 PF08402 TOBE domain H9J99_09095 PF00005 ABC transporter H9J99_09100 PF12804 MobA-like NTP transferase domain H9J99_09105 PF03453 MoeA N-terminal region (domain I and II) H9J99_09105 PF03454 MoeA C-terminal region (domain IV) H9J99_09105 PF00994 Probable molybdopterin binding domain H9J99_09115 PF00480 ROK family H9J99_09120 PF03942 DTW domain H9J99_09155 PF17202 Single cache domain 3 H9J99_09155 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9J99_09155 PF00672 HAMP domain H9J99_09160 PF00877 NlpC/P60 family H9J99_09170 PF05230 MASE2 domain H9J99_09170 PF00990 Diguanylate cyclase, GGDEF domain H9J99_09175 PF00072 Response regulator receiver domain H9J99_09175 PF01339 CheB methylesterase H9J99_09180 PF03881 Fructosamine kinase H9J99_09190 PF00677 Lumazine binding domain H9J99_09195 PF01554 MatE H9J99_09205 PF14743 DNA ligase OB-like domain H9J99_09205 PF01068 ATP dependent DNA ligase domain H9J99_09210 PF01740 STAS domain H9J99_09220 PF10531 SLBB domain H9J99_09220 PF02563 Polysaccharide biosynthesis/export protein H9J99_09235 PF02954 Bacterial regulatory protein, Fis family H9J99_09235 PF00072 Response regulator receiver domain H9J99_09235 PF00158 Sigma-54 interaction domain H9J99_09240 PF00534 Glycosyl transferases group 1 H9J99_09240 PF13439 Glycosyltransferase Family 4 H9J99_09245 PF13439 Glycosyltransferase Family 4 H9J99_09245 PF00534 Glycosyl transferases group 1 H9J99_09275 PF00534 Glycosyl transferases group 1 H9J99_09275 PF13439 Glycosyltransferase Family 4 H9J99_09280 PF00535 Glycosyl transferase family 2 H9J99_09285 PF02397 Bacterial sugar transferase H9J99_09295 PF02028 BCCT, betaine/carnitine/choline family transporter H9J99_09310 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold H9J99_09310 PF00271 Helicase conserved C-terminal domain H9J99_09310 PF04408 Helicase associated domain (HA2) H9J99_09310 PF11898 Domain of unknown function (DUF3418) H9J99_09310 PF00270 DEAD/DEAH box helicase H9J99_09315 PF02525 Flavodoxin-like fold H9J99_09325 PF02613 Nitrate reductase delta subunit H9J99_09330 PF04976 DMSO reductase anchor subunit (DmsC) H9J99_09335 PF12800 4Fe-4S binding domain H9J99_09335 PF13247 4Fe-4S dicluster domain H9J99_09340 PF00384 Molybdopterin oxidoreductase H9J99_09340 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H9J99_09340 PF01568 Molydopterin dinucleotide binding domain H9J99_09370 PF17158 Membrane-associated sensor, integral membrane domain H9J99_09370 PF00990 Diguanylate cyclase, GGDEF domain H9J99_09380 PF00012 Hsp70 protein H9J99_09385 PF00012 Hsp70 protein H9J99_09410 PF00664 ABC transporter transmembrane region H9J99_09410 PF00005 ABC transporter H9J99_09415 PF00664 ABC transporter transmembrane region H9J99_09415 PF00005 ABC transporter H9J99_09435 PF03222 Tryptophan/tyrosine permease family H9J99_09440 PF00465 Iron-containing alcohol dehydrogenase H9J99_09445 PF01966 HD domain H9J99_09470 PF01235 Sodium:alanine symporter family H9J99_09480 PF01810 LysE type translocator H9J99_09485 PF02074 Carboxypeptidase Taq (M32) metallopeptidase H9J99_09490 PF03279 Bacterial lipid A biosynthesis acyltransferase H9J99_09495 PF13520 Amino acid permease H9J99_09505 PF04204 Homoserine O-succinyltransferase H9J99_09520 PF00563 EAL domain H9J99_09520 PF03707 Bacterial signalling protein N terminal repeat H9J99_09520 PF00990 Diguanylate cyclase, GGDEF domain H9J99_09525 PF01627 Hpt domain H9J99_09525 PF00672 HAMP domain H9J99_09525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9J99_09525 PF00512 His Kinase A (phospho-acceptor) domain H9J99_09525 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) H9J99_09525 PF00072 Response regulator receiver domain H9J99_09540 PF00132 Bacterial transferase hexapeptide (six repeats) H9J99_09540 PF12464 Maltose acetyltransferase H9J99_09550 PF01928 CYTH domain H9J99_09560 PF04237 YjbR H9J99_09565 PF01047 MarR family H9J99_09575 PF12833 Helix-turn-helix domain H9J99_09590 PF00196 Bacterial regulatory proteins, luxR family H9J99_09590 PF00563 EAL domain H9J99_09595 PF02833 DHHA2 domain H9J99_09595 PF01368 DHH family H9J99_09600 PF00202 Aminotransferase class-III H9J99_09605 PF00171 Aldehyde dehydrogenase family H9J99_09610 PF04371 Porphyromonas-type peptidyl-arginine deiminase H9J99_09615 PF00795 Carbon-nitrogen hydrolase H9J99_09620 PF01266 FAD dependent oxidoreductase H9J99_09625 PF00171 Aldehyde dehydrogenase family H9J99_09630 PF07883 Cupin domain H9J99_09630 PF01381 Helix-turn-helix H9J99_09635 PF07722 Peptidase C26 H9J99_09640 PF00120 Glutamine synthetase, catalytic domain H9J99_09645 PF03553 Na+/H+ antiporter family H9J99_09675 PF03466 LysR substrate binding domain H9J99_09675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_09690 PF08543 Phosphomethylpyrimidine kinase H9J99_09695 PF00155 Aminotransferase class I and II H9J99_09700 PF06826 Predicted Permease Membrane Region H9J99_09700 PF02080 TrkA-C domain H9J99_09710 PF13533 Biotin-lipoyl like H9J99_09725 PF00135 Carboxylesterase family H9J99_09730 PF13091 PLD-like domain H9J99_09735 PF17243 POTRA domain TamA domain 1 H9J99_09735 PF01103 Surface antigen H9J99_09785 PF13302 Acetyltransferase (GNAT) domain H9J99_09795 PF00873 AcrB/AcrD/AcrF family H9J99_09800 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9J99_09845 PF00589 Phage integrase family H9J99_09860 PF00583 Acetyltransferase (GNAT) family H9J99_10020 PF01695 IstB-like ATP binding protein H9J99_10025 PF00665 Integrase core domain H9J99_10055 PF13508 Acetyltransferase (GNAT) domain H9J99_10150 PF10137 Predicted nucleotide-binding protein containing TIR-like domain H9J99_10250 PF01610 Transposase H9J99_10250 PF13542 Helix-turn-helix domain of transposase family ISL3 H9J99_10250 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H9J99_10285 PF01810 LysE type translocator H9J99_10330 PF01548 Transposase H9J99_10330 PF02371 Transposase IS116/IS110/IS902 family H9J99_10335 PF00873 AcrB/AcrD/AcrF family H9J99_10360 PF00873 AcrB/AcrD/AcrF family H9J99_10375 PF17200 Single Cache domain 2 H9J99_10375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9J99_10375 PF00672 HAMP domain H9J99_10380 PF02264 LamB porin H9J99_10385 PF08532 Beta-galactosidase trimerisation domain H9J99_10385 PF08533 Beta-galactosidase C-terminal domain H9J99_10385 PF02449 Beta-galactosidase H9J99_10390 PF07745 Glycosyl hydrolase family 53 H9J99_10395 PF00528 Binding-protein-dependent transport system inner membrane component H9J99_10400 PF00528 Binding-protein-dependent transport system inner membrane component H9J99_10405 PF13416 Bacterial extracellular solute-binding protein H9J99_10410 PF00005 ABC transporter H9J99_10410 PF17912 MalK OB fold domain H9J99_10415 PF00356 Bacterial regulatory proteins, lacI family H9J99_10420 PF07745 Glycosyl hydrolase family 53 H9J99_10430 PF01548 Transposase H9J99_10430 PF02371 Transposase IS116/IS110/IS902 family H9J99_10435 PF13419 Haloacid dehalogenase-like hydrolase H9J99_10455 PF16875 Glycosyl hydrolase family 36 N-terminal domain H9J99_10455 PF16874 Glycosyl hydrolase family 36 C-terminal domain H9J99_10460 PF02264 LamB porin H9J99_10470 PF02836 Glycosyl hydrolases family 2, TIM barrel domain H9J99_10470 PF16353 Domain of unknown function(DUF4981) H9J99_10470 PF00703 Glycosyl hydrolases family 2 H9J99_10470 PF02929 Beta galactosidase small chain H9J99_10470 PF02837 Glycosyl hydrolases family 2, sugar binding domain H9J99_10475 PF00356 Bacterial regulatory proteins, lacI family H9J99_10490 PF10509 Galactokinase galactose-binding signature H9J99_10490 PF08544 GHMP kinases C terminal H9J99_10490 PF00288 GHMP kinases N terminal domain H9J99_10495 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain H9J99_10495 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain H9J99_10500 PF16363 GDP-mannose 4,6 dehydratase H9J99_10575 PF00583 Acetyltransferase (GNAT) family H9J99_10740 PF13495 Phage integrase, N-terminal SAM-like domain H9J99_10740 PF00589 Phage integrase family H9J99_10755 PF13302 Acetyltransferase (GNAT) domain H9J99_10760 PF18024 Helix-turn-helix domain H9J99_10760 PF00158 Sigma-54 interaction domain H9J99_10765 PF05128 Domain of unknown function (DUF697) H9J99_10770 PF04317 YcjX-like family, DUF463 H9J99_10785 PF00425 chorismate binding enzyme H9J99_10785 PF04715 Anthranilate synthase component I, N terminal region H9J99_10800 PF00293 NUDIX domain H9J99_10805 PF03222 Tryptophan/tyrosine permease family H9J99_10810 PF03315 Serine dehydratase beta chain H9J99_10810 PF03313 Serine dehydratase alpha chain H9J99_10815 PF00563 EAL domain H9J99_10815 PF04940 Sensors of blue-light using FAD H9J99_10825 PF01242 6-pyruvoyl tetrahydropterin synthase H9J99_10830 PF12729 Four helix bundle sensory module for signal transduction H9J99_10830 PF00672 HAMP domain H9J99_10830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9J99_10835 PF01336 OB-fold nucleic acid binding domain H9J99_10835 PF00152 tRNA synthetases class II (D, K and N) H9J99_10845 PF00392 Bacterial regulatory proteins, gntR family H9J99_10845 PF00155 Aminotransferase class I and II H9J99_10860 PF00155 Aminotransferase class I and II H9J99_10880 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9J99_10880 PF00672 HAMP domain H9J99_10885 PF02028 BCCT, betaine/carnitine/choline family transporter H9J99_10890 PF01047 MarR family H9J99_10895 PF00196 Bacterial regulatory proteins, luxR family H9J99_10895 PF00072 Response regulator receiver domain H9J99_10900 PF17200 Single Cache domain 2 H9J99_10900 PF07730 Histidine kinase H9J99_10905 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component H9J99_10915 PF03480 Bacterial extracellular solute-binding protein, family 7 H9J99_10930 PF00753 Metallo-beta-lactamase superfamily H9J99_10935 PF05951 Bacterial protein of unknown function (DUF882) H9J99_10940 PF01471 Putative peptidoglycan binding domain H9J99_10940 PF03734 L,D-transpeptidase catalytic domain H9J99_10965 PF00925 GTP cyclohydrolase II H9J99_10975 PF03918 Cytochrome C biogenesis protein H9J99_10980 PF08534 Redoxin H9J99_10985 PF01578 Cytochrome C assembly protein H9J99_10985 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal H9J99_10990 PF03916 Polysulphide reductase, NrfD H9J99_10995 PF13247 4Fe-4S dicluster domain H9J99_11005 PF02335 Cytochrome c552 H9J99_11020 PF03989 DNA gyrase C-terminal domain, beta-propeller H9J99_11020 PF00521 DNA gyrase/topoisomerase IV, subunit A H9J99_11030 PF00317 Ribonucleotide reductase, all-alpha domain H9J99_11030 PF03477 ATP cone domain H9J99_11030 PF02867 Ribonucleotide reductase, barrel domain H9J99_11035 PF00268 Ribonucleotide reductase, small chain H9J99_11045 PF00994 Probable molybdopterin binding domain H9J99_11060 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain H9J99_11065 PF03435 Saccharopine dehydrogenase NADP binding domain H9J99_11065 PF16653 Saccharopine dehydrogenase C-terminal domain H9J99_11070 PF00202 Aminotransferase class-III H9J99_11095 PF01066 CDP-alcohol phosphatidyltransferase H9J99_11105 PF00072 Response regulator receiver domain H9J99_11105 PF00196 Bacterial regulatory proteins, luxR family H9J99_11110 PF03104 DNA polymerase family B, exonuclease domain H9J99_11110 PF00136 DNA polymerase family B H9J99_11120 PF01132 Elongation factor P (EF-P) OB domain H9J99_11120 PF09285 Elongation factor P, C-terminal H9J99_11120 PF08207 Elongation factor P (EF-P) KOW-like domain H9J99_11125 PF04269 Protein of unknown function, DUF440 H9J99_11130 PF01479 S4 domain H9J99_11130 PF00849 RNA pseudouridylate synthase H9J99_11140 PF01300 Telomere recombination H9J99_11145 PF02811 PHP domain H9J99_11150 PF08056 Tryptophan operon leader peptide H9J99_11155 PF04715 Anthranilate synthase component I, N terminal region H9J99_11155 PF00425 chorismate binding enzyme H9J99_11160 PF00117 Glutamine amidotransferase class-I H9J99_11165 PF02885 Glycosyl transferase family, helical bundle domain H9J99_11165 PF00591 Glycosyl transferase family, a/b domain H9J99_11170 PF00218 Indole-3-glycerol phosphate synthase H9J99_11170 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase H9J99_11175 PF00291 Pyridoxal-phosphate dependent enzyme H9J99_11180 PF00290 Tryptophan synthase alpha chain H9J99_11185 PF00027 Cyclic nucleotide-binding domain H9J99_11185 PF13545 Crp-like helix-turn-helix domain H9J99_11190 PF00501 AMP-binding enzyme H9J99_11190 PF13193 AMP-binding enzyme C-terminal domain H9J99_11195 PF00375 Sodium:dicarboxylate symporter family H9J99_11200 PF17327 Acyl homoserine lactone synthase H9J99_11205 PF00072 Response regulator receiver domain H9J99_11205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9J99_11215 PF04279 Intracellular septation protein A H9J99_11220 PF03061 Thioesterase superfamily H9J99_11225 PF03795 YCII-related domain H9J99_11235 PF08267 Cobalamin-independent synthase, N-terminal domain H9J99_11235 PF01717 Cobalamin-independent synthase, Catalytic domain H9J99_11240 PF03466 LysR substrate binding domain H9J99_11240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_11255 PF00563 EAL domain H9J99_11255 PF00990 Diguanylate cyclase, GGDEF domain H9J99_11255 PF00360 Phytochrome region H9J99_11255 PF01590 GAF domain H9J99_11260 PF08497 Radical SAM N-terminal H9J99_11260 PF04055 Radical SAM superfamily H9J99_11260 PF11842 Domain of unknown function (DUF3362) H9J99_11265 PF00672 HAMP domain H9J99_11265 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9J99_11270 PF00072 Response regulator receiver domain H9J99_11270 PF00486 Transcriptional regulatory protein, C terminal H9J99_11275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9J99_11275 PF00512 His Kinase A (phospho-acceptor) domain H9J99_11275 PF00672 HAMP domain H9J99_11295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_11295 PF03466 LysR substrate binding domain H9J99_11300 PF00529 HlyD membrane-fusion protein of T1SS H9J99_11300 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9J99_11310 PF08267 Cobalamin-independent synthase, N-terminal domain H9J99_11310 PF01717 Cobalamin-independent synthase, Catalytic domain H9J99_11320 PF02311 AraC-like ligand binding domain H9J99_11320 PF12833 Helix-turn-helix domain H9J99_11325 PF00857 Isochorismatase family H9J99_11330 PF12704 MacB-like periplasmic core domain H9J99_11330 PF00005 ABC transporter H9J99_11330 PF02687 FtsX-like permease family H9J99_11335 PF00005 ABC transporter H9J99_11335 PF12704 MacB-like periplasmic core domain H9J99_11335 PF02687 FtsX-like permease family H9J99_11350 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9J99_11370 PF00085 Thioredoxin H9J99_11375 PF02683 Cytochrome C biogenesis protein transmembrane region H9J99_11375 PF11412 Disulphide bond corrector protein DsbC H9J99_11385 PF03466 LysR substrate binding domain H9J99_11385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_11390 PF00072 Response regulator receiver domain H9J99_11390 PF00196 Bacterial regulatory proteins, luxR family H9J99_11395 PF00512 His Kinase A (phospho-acceptor) domain H9J99_11395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9J99_11400 PF13247 4Fe-4S dicluster domain H9J99_11405 PF03916 Polysulphide reductase, NrfD H9J99_11410 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H9J99_11410 PF01568 Molydopterin dinucleotide binding domain H9J99_11410 PF00384 Molybdopterin oxidoreductase H9J99_11415 PF00034 Cytochrome c H9J99_11420 PF13442 Cytochrome C oxidase, cbb3-type, subunit III H9J99_11425 PF04403 Paraquat-inducible protein A H9J99_11430 PF02470 MlaD protein H9J99_11440 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase H9J99_11450 PF00535 Glycosyl transferase family 2 H9J99_11455 PF01370 NAD dependent epimerase/dehydratase family H9J99_11465 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9J99_11470 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family H9J99_11475 PF18073 Rubredoxin metal binding domain H9J99_11480 PF06305 Lipopolysaccharide assembly protein A domain H9J99_11485 PF00216 Bacterial DNA-binding protein H9J99_11490 PF00575 S1 RNA binding domain H9J99_11495 PF02224 Cytidylate kinase H9J99_11500 PF01343 Peptidase family S49 H9J99_11500 PF08496 Peptidase family S49 N-terminal H9J99_11505 PF00106 short chain dehydrogenase H9J99_11520 PF17657 Bacterial DNA polymerase III alpha subunit finger domain H9J99_11520 PF14579 Helix-hairpin-helix motif H9J99_11520 PF02811 PHP domain H9J99_11520 PF01336 OB-fold nucleic acid binding domain H9J99_11520 PF07733 Bacterial DNA polymerase III alpha NTPase domain H9J99_11525 PF01584 CheW-like domain H9J99_11525 PF00072 Response regulator receiver domain H9J99_11530 PF00480 ROK family H9J99_11535 PF00224 Pyruvate kinase, barrel domain H9J99_11535 PF02887 Pyruvate kinase, alpha/beta domain H9J99_11540 PF01734 Patatin-like phospholipase H9J99_11555 PF00209 Sodium:neurotransmitter symporter family H9J99_11570 PF00367 phosphotransferase system, EIIB H9J99_11570 PF02378 Phosphotransferase system, EIIC H9J99_11575 PF01026 TatD related DNase H9J99_11580 PF09115 DNA polymerase III, delta subunit, C terminal H9J99_11585 PF02223 Thymidylate kinase H9J99_11590 PF02618 YceG-like family H9J99_11595 PF01063 Amino-transferase class IV H9J99_11600 PF02801 Beta-ketoacyl synthase, C-terminal domain H9J99_11600 PF00109 Beta-ketoacyl synthase, N-terminal domain H9J99_11605 PF00550 Phosphopantetheine attachment site H9J99_11615 PF00698 Acyl transferase domain H9J99_11620 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal H9J99_11620 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III H9J99_11625 PF02504 Fatty acid synthesis protein H9J99_11630 PF01783 Ribosomal L32p protein family H9J99_11635 PF02620 Large ribosomal RNA subunit accumulation protein YceD H9J99_11640 PF02545 Maf-like protein H9J99_11645 PF00849 RNA pseudouridylate synthase H9J99_11645 PF01479 S4 domain H9J99_11650 PF10150 Ribonuclease E/G family H9J99_11650 PF00575 S1 RNA binding domain H9J99_11650 PF12111 Polyribonucleotide phosphorylase C terminal H9J99_11655 PF00916 Sulfate permease family H9J99_11655 PF01740 STAS domain H9J99_11660 PF01451 Low molecular weight phosphotyrosine protein phosphatase H9J99_11665 PF12557 Cob(I)alamin adenosyltransferase N terminal H9J99_11665 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP H9J99_11675 PF00485 Phosphoribulokinase / Uridine kinase family H9J99_11680 PF10609 NUBPL iron-transfer P-loop NTPase H9J99_11685 PF01588 Putative tRNA binding domain H9J99_11685 PF09334 tRNA synthetases class I (M) H9J99_11695 PF00392 Bacterial regulatory proteins, gntR family H9J99_11695 PF07840 FadR C-terminal domain H9J99_11700 PF06450 Bacterial Na+/H+ antiporter B (NhaB) H9J99_11705 PF02600 Disulfide bond formation protein DsbB H9J99_11710 PF02810 SEC-C motif H9J99_11710 PF03695 Uncharacterised protein family (UPF0149) H9J99_11715 PF01207 Dihydrouridine synthase (Dus) H9J99_11720 PF00072 Response regulator receiver domain H9J99_11720 PF00990 Diguanylate cyclase, GGDEF domain H9J99_11735 PF02653 Branched-chain amino acid transport system / permease component H9J99_11745 PF04217 Protein of unknown function, DUF412 H9J99_11750 PF00871 Acetokinase family H9J99_11755 PF07085 DRTGG domain H9J99_11755 PF01515 Phosphate acetyl/butaryl transferase H9J99_11760 PF13194 Domain of unknown function (DUF4010) H9J99_11770 PF13409 Glutathione S-transferase, N-terminal domain H9J99_11775 PF00005 ABC transporter H9J99_11775 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9J99_11780 PF00005 ABC transporter H9J99_11780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9J99_11785 PF00528 Binding-protein-dependent transport system inner membrane component H9J99_11785 PF12911 N-terminal TM domain of oligopeptide transport permease C H9J99_11790 PF00528 Binding-protein-dependent transport system inner membrane component H9J99_11795 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9J99_11800 PF02391 MoaE protein H9J99_11805 PF02597 ThiS family H9J99_11810 PF01967 MoaC family H9J99_11815 PF00994 Probable molybdopterin binding domain H9J99_11820 PF06463 Molybdenum Cofactor Synthesis C H9J99_11820 PF04055 Radical SAM superfamily H9J99_11825 PF01933 Uncharacterised protein family UPF0052 H9J99_11830 PF01627 Hpt domain H9J99_11835 PF02954 Bacterial regulatory protein, Fis family H9J99_11835 PF00158 Sigma-54 interaction domain H9J99_11835 PF00072 Response regulator receiver domain H9J99_11840 PF17757 UvrB interaction domain H9J99_11840 PF04851 Type III restriction enzyme, res subunit H9J99_11840 PF02151 UvrB/uvrC motif H9J99_11840 PF00271 Helicase conserved C-terminal domain H9J99_11840 PF12344 Ultra-violet resistance protein B H9J99_11850 PF02508 Rnf-Nqr subunit, membrane protein H9J99_11855 PF04060 Putative Fe-S cluster H9J99_11860 PF13375 RnfC Barrel sandwich hybrid domain H9J99_11860 PF10531 SLBB domain H9J99_11860 PF12838 4Fe-4S dicluster domain H9J99_11860 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit H9J99_11865 PF03116 NQR2, RnfD, RnfE family H9J99_11870 PF04205 FMN-binding domain H9J99_11875 PF02508 Rnf-Nqr subunit, membrane protein H9J99_11880 PF00633 Helix-hairpin-helix motif H9J99_11880 PF10576 Iron-sulfur binding domain of endonuclease III H9J99_11880 PF00730 HhH-GPD superfamily base excision DNA repair protein H9J99_11885 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H9J99_11890 PF10952 Protein of unknown function (DUF2753) H9J99_11895 PF18393 MotY N-terminal domain H9J99_11895 PF00691 OmpA family H9J99_11900 PF00929 Exonuclease H9J99_11905 PF13726 Na+-H+ antiporter family H9J99_11905 PF03553 Na+/H+ antiporter family H9J99_11915 PF00462 Glutaredoxin H9J99_11920 PF02777 Iron/manganese superoxide dismutases, C-terminal domain H9J99_11920 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain H9J99_11935 PF00465 Iron-containing alcohol dehydrogenase H9J99_11935 PF00171 Aldehyde dehydrogenase family H9J99_11940 PF01914 MarC family integral membrane protein H9J99_11945 PF00027 Cyclic nucleotide-binding domain H9J99_11945 PF00520 Ion transport protein H9J99_11950 PF01118 Semialdehyde dehydrogenase, NAD binding domain H9J99_11950 PF02774 Semialdehyde dehydrogenase, dimerisation domain H9J99_11955 PF03553 Na+/H+ antiporter family H9J99_11970 PF04245 37-kD nucleoid-associated bacterial protein H9J99_11975 PF07208 Protein of unknown function (DUF1414) H9J99_11980 PF11893 Domain of unknown function (DUF3413) H9J99_11980 PF00884 Sulfatase H9J99_11990 PF00850 Histone deacetylase domain H9J99_11995 PF00106 short chain dehydrogenase H9J99_12005 PF01131 DNA topoisomerase H9J99_12005 PF01751 Toprim domain H9J99_12015 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H9J99_12015 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9J99_12020 PF01343 Peptidase family S49 H9J99_12025 PF00710 Asparaginase, N-terminal H9J99_12025 PF17763 Glutaminase/Asparaginase C-terminal domain H9J99_12030 PF07023 Protein of unknown function (DUF1315) H9J99_12040 PF01641 SelR domain H9J99_12045 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain H9J99_12045 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain H9J99_12050 PF01263 Aldose 1-epimerase H9J99_12055 PF00672 HAMP domain H9J99_12055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9J99_12055 PF02743 Cache domain H9J99_12060 PF13847 Methyltransferase domain H9J99_12075 PF00245 Alkaline phosphatase H9J99_12085 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H9J99_12090 PF03992 Antibiotic biosynthesis monooxygenase H9J99_12095 PF00924 Mechanosensitive ion channel H9J99_12095 PF05552 Conserved TM helix H9J99_12100 PF03692 Putative zinc- or iron-chelating domain H9J99_12105 PF04226 Transglycosylase associated protein H9J99_12110 PF03692 Putative zinc- or iron-chelating domain H9J99_12120 PF03313 Serine dehydratase alpha chain H9J99_12125 PF01042 Endoribonuclease L-PSP H9J99_12135 PF00230 Major intrinsic protein H9J99_12140 PF02132 RecR protein H9J99_12140 PF13662 Toprim domain H9J99_12145 PF02575 YbaB/EbfC DNA-binding family H9J99_12150 PF12169 DNA polymerase III subunits gamma and tau domain III H9J99_12150 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding H9J99_12150 PF12170 DNA polymerase III tau subunit V interacting with alpha H9J99_12155 PF00156 Phosphoribosyl transferase domain H9J99_12160 PF04304 Protein of unknown function (DUF454) H9J99_12165 PF00072 Response regulator receiver domain H9J99_12170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_12170 PF03466 LysR substrate binding domain H9J99_12175 PF00156 Phosphoribosyl transferase domain H9J99_12180 PF02674 Colicin V production protein H9J99_12185 PF05036 Sporulation related domain H9J99_12190 PF02875 Mur ligase family, glutamate ligase domain H9J99_12190 PF08245 Mur ligase middle domain H9J99_12195 PF01039 Carboxyl transferase domain H9J99_12195 PF17848 Acetyl-coA carboxylase zinc finger domain H9J99_12200 PF01416 tRNA pseudouridine synthase H9J99_12210 PF01118 Semialdehyde dehydrogenase, NAD binding domain H9J99_12210 PF02774 Semialdehyde dehydrogenase, dimerisation domain H9J99_12215 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H9J99_12215 PF11890 Domain of unknown function (DUF3410) H9J99_12215 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H9J99_12220 PF00109 Beta-ketoacyl synthase, N-terminal domain H9J99_12220 PF02801 Beta-ketoacyl synthase, C-terminal domain H9J99_12230 PF03358 NADPH-dependent FMN reductase H9J99_12235 PF08891 YfcL protein H9J99_12240 PF04315 Elongation factor P hydroxylase H9J99_12245 PF03458 UPF0126 domain H9J99_12250 PF01264 Chorismate synthase H9J99_12255 PF05175 Methyltransferase small domain H9J99_12260 PF01713 Smr domain H9J99_12265 PF00300 Histidine phosphatase superfamily (branch 1) H9J99_12270 PF00675 Insulinase (Peptidase family M16) H9J99_12270 PF05193 Peptidase M16 inactive domain H9J99_12270 PF16187 Middle or third domain of peptidase_M16 H9J99_12280 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain H9J99_12280 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain H9J99_12280 PF00378 Enoyl-CoA hydratase/isomerase H9J99_12285 PF00108 Thiolase, N-terminal domain H9J99_12285 PF02803 Thiolase, C-terminal domain H9J99_12290 PF04542 Sigma-70 region 2 H9J99_12290 PF08281 Sigma-70, region 4 H9J99_12300 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) H9J99_12305 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) H9J99_12315 PF04333 MlaA lipoprotein H9J99_12325 PF03918 Cytochrome C biogenesis protein H9J99_12330 PF08534 Redoxin H9J99_12335 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal H9J99_12335 PF01578 Cytochrome C assembly protein H9J99_12340 PF03100 CcmE H9J99_12345 PF04995 Heme exporter protein D (CcmD) H9J99_12350 PF01578 Cytochrome C assembly protein H9J99_12355 PF03379 CcmB protein H9J99_12360 PF00005 ABC transporter H9J99_12370 PF01584 CheW-like domain H9J99_12380 PF13614 AAA domain H9J99_12385 PF00072 Response regulator receiver domain H9J99_12385 PF01339 CheB methylesterase H9J99_12390 PF01584 CheW-like domain H9J99_12390 PF02895 Signal transducing histidine kinase, homodimeric domain H9J99_12390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9J99_12390 PF01627 Hpt domain H9J99_12390 PF00072 Response regulator receiver domain H9J99_12395 PF04344 Chemotaxis phosphatase, CheZ H9J99_12405 PF04542 Sigma-70 region 2 H9J99_12405 PF04539 Sigma-70 region 3 H9J99_12405 PF04545 Sigma-70, region 4 H9J99_12410 PF10609 NUBPL iron-transfer P-loop NTPase H9J99_12415 PF00448 SRP54-type protein, GTPase domain H9J99_12420 PF00771 FHIPEP family H9J99_12445 PF00561 alpha/beta hydrolase fold H9J99_12455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_12455 PF03466 LysR substrate binding domain H9J99_12480 PF00313 'Cold-shock' DNA-binding domain H9J99_12500 PF00665 Integrase core domain H9J99_12500 PF13936 Helix-turn-helix domain H9J99_12555 PF01311 Bacterial export proteins, family 1 H9J99_12560 PF01313 Bacterial export proteins, family 3 H9J99_12565 PF00813 FliP family H9J99_12570 PF04347 Flagellar biosynthesis protein, FliO H9J99_12575 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term H9J99_12580 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term H9J99_12580 PF02154 Flagellar motor switch protein FliM H9J99_12600 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H9J99_12600 PF18269 T3SS EscN ATPase C-terminal domain H9J99_12610 PF01706 FliG C-terminal domain H9J99_12610 PF14841 FliG middle domain H9J99_12610 PF14842 FliG N-terminal domain H9J99_12615 PF01514 Secretory protein of YscJ/FliF family H9J99_12615 PF08345 Flagellar M-ring protein C-terminal H9J99_12620 PF02049 Flagellar hook-basal body complex protein FliE H9J99_12625 PF02954 Bacterial regulatory protein, Fis family H9J99_12625 PF00072 Response regulator receiver domain H9J99_12625 PF00158 Sigma-54 interaction domain H9J99_12630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9J99_12630 PF00512 His Kinase A (phospho-acceptor) domain H9J99_12630 PF13188 PAS domain H9J99_12635 PF06490 Flagellar regulatory protein FleQ H9J99_12635 PF00158 Sigma-54 interaction domain H9J99_12635 PF02954 Bacterial regulatory protein, Fis family H9J99_12640 PF02561 Flagellar protein FliS H9J99_12650 PF07195 Flagellar hook-associated protein 2 C-terminus H9J99_12650 PF07196 Flagellin hook IN motif H9J99_12650 PF02465 Flagellar hook-associated protein 2 N-terminus H9J99_12655 PF03646 FlaG protein H9J99_12660 PF00700 Bacterial flagellin C-terminal helical region H9J99_12660 PF07196 Flagellin hook IN motif H9J99_12660 PF00669 Bacterial flagellin N-terminal helical region H9J99_12665 PF00700 Bacterial flagellin C-terminal helical region H9J99_12665 PF07196 Flagellin hook IN motif H9J99_12665 PF00669 Bacterial flagellin N-terminal helical region H9J99_12670 PF00669 Bacterial flagellin N-terminal helical region H9J99_12670 PF07196 Flagellin hook IN motif H9J99_12670 PF00700 Bacterial flagellin C-terminal helical region H9J99_12675 PF04261 Dyp-type peroxidase family H9J99_12680 PF11143 Protein of unknown function (DUF2919) H9J99_12700 PF03960 ArsC family H9J99_12705 PF07687 Peptidase dimerisation domain H9J99_12705 PF01546 Peptidase family M20/M25/M40 H9J99_12720 PF06804 NlpB/DapX lipoprotein H9J99_12725 PF00701 Dihydrodipicolinate synthetase family H9J99_12730 PF01842 ACT domain H9J99_12735 PF00578 AhpC/TSA family H9J99_12740 PF01594 AI-2E family transporter H9J99_12750 PF01435 Peptidase family M48 H9J99_12750 PF13181 Tetratricopeptide repeat H9J99_12755 PF03960 ArsC family H9J99_12760 PF03358 NADPH-dependent FMN reductase H9J99_12775 PF00860 Permease family H9J99_12785 PF00586 AIR synthase related protein, N-terminal domain H9J99_12785 PF02769 AIR synthase related protein, C-terminal domain H9J99_12790 PF00551 Formyl transferase H9J99_12795 PF13230 Glutamine amidotransferases class-II H9J99_12800 PF13580 SIS domain H9J99_12805 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H9J99_12805 PF02770 Acyl-CoA dehydrogenase, middle domain H9J99_12805 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H9J99_12805 PF09317 Domain of unknown function (DUF1974) H9J99_12810 PF01740 STAS domain H9J99_12810 PF00916 Sulfate permease family H9J99_12820 PF00929 Exonuclease H9J99_12825 PF00075 RNase H H9J99_12830 PF08241 Methyltransferase domain H9J99_12835 PF16123 Hydroxyacylglutathione hydrolase C-terminus H9J99_12835 PF00753 Metallo-beta-lactamase superfamily H9J99_12840 PF01464 Transglycosylase SLT domain H9J99_12840 PF01476 LysM domain H9J99_12850 PF03372 Endonuclease/Exonuclease/phosphatase family H9J99_12855 PF00543 Nitrogen regulatory protein P-II H9J99_12860 PF00034 Cytochrome c H9J99_12865 PF01171 PP-loop family H9J99_12865 PF09179 TilS substrate binding domain H9J99_12865 PF11734 TilS substrate C-terminal domain H9J99_12870 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit H9J99_12875 PF07733 Bacterial DNA polymerase III alpha NTPase domain H9J99_12875 PF17657 Bacterial DNA polymerase III alpha subunit finger domain H9J99_12875 PF14579 Helix-hairpin-helix motif H9J99_12875 PF02811 PHP domain H9J99_12875 PF01336 OB-fold nucleic acid binding domain H9J99_12880 PF01351 Ribonuclease HII H9J99_12885 PF02684 Lipid-A-disaccharide synthetase H9J99_12890 PF00132 Bacterial transferase hexapeptide (six repeats) H9J99_12890 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 H9J99_12895 PF07977 FabA-like domain H9J99_12900 PF00132 Bacterial transferase hexapeptide (six repeats) H9J99_12900 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD H9J99_12905 PF03938 Outer membrane protein (OmpH-like) H9J99_12910 PF01103 Surface antigen H9J99_12910 PF07244 Surface antigen variable number repeat H9J99_12915 PF17820 PDZ domain H9J99_12915 PF02163 Peptidase family M50 H9J99_12920 PF13288 DXP reductoisomerase C-terminal domain H9J99_12920 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase H9J99_12920 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain H9J99_12930 PF01255 Putative undecaprenyl diphosphate synthase H9J99_12935 PF01765 Ribosome recycling factor H9J99_12945 PF00889 Elongation factor TS H9J99_12950 PF00318 Ribosomal protein S2 H9J99_12955 PF00557 Metallopeptidase family M24 H9J99_12960 PF08335 GlnD PII-uridylyltransferase H9J99_12960 PF01842 ACT domain H9J99_12960 PF01966 HD domain H9J99_12960 PF01909 Nucleotidyltransferase domain H9J99_12965 PF11944 Protein of unknown function (DUF3461) H9J99_12970 PF00849 RNA pseudouridylate synthase H9J99_12975 PF04287 tRNA pseudouridine synthase C H9J99_13000 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 H9J99_13005 PF03806 AbgT putative transporter family H9J99_13010 PF00444 Ribosomal protein L36 H9J99_13015 PF01197 Ribosomal protein L31 H9J99_13020 PF01980 tRNA-methyltransferase O H9J99_13020 PF18389 TrmO C-terminal domain H9J99_13025 PF03129 Anticodon binding domain H9J99_13025 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) H9J99_13025 PF04073 Aminoacyl-tRNA editing domain H9J99_13035 PF06786 Uncharacterised protein family (UPF0253) H9J99_13045 PF00209 Sodium:neurotransmitter symporter family H9J99_13060 PF01272 Transcription elongation factor, GreA/GreB, C-term H9J99_13060 PF03449 Transcription elongation factor, N-terminal H9J99_13065 PF00270 DEAD/DEAH box helicase H9J99_13065 PF00271 Helicase conserved C-terminal domain H9J99_13065 PF00570 HRDC domain H9J99_13065 PF16124 RecQ zinc-binding H9J99_13065 PF09382 RQC domain H9J99_13070 PF11799 impB/mucB/samB family C-terminal domain H9J99_13070 PF11798 IMS family HHH motif H9J99_13070 PF00817 impB/mucB/samB family H9J99_13085 PF02424 ApbE family H9J99_13090 PF00111 2Fe-2S iron-sulfur cluster binding domain H9J99_13090 PF00175 Oxidoreductase NAD-binding domain H9J99_13090 PF00970 Oxidoreductase FAD-binding domain H9J99_13095 PF02508 Rnf-Nqr subunit, membrane protein H9J99_13100 PF02508 Rnf-Nqr subunit, membrane protein H9J99_13105 PF04205 FMN-binding domain H9J99_13110 PF03116 NQR2, RnfD, RnfE family H9J99_13115 PF11973 NQRA C-terminal domain H9J99_13115 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) H9J99_13120 PF01722 BolA-like protein H9J99_13125 PF05175 Methyltransferase small domain H9J99_13130 PF03923 Uncharacterized lipoprotein H9J99_13130 PF08139 Prokaryotic membrane lipoprotein lipid attachment site H9J99_13135 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD H9J99_13140 PF07690 Major Facilitator Superfamily H9J99_13150 PF04545 Sigma-70, region 4 H9J99_13150 PF04542 Sigma-70 region 2 H9J99_13165 PF03502 Nucleoside-specific channel-forming protein, Tsx H9J99_13170 PF08546 Ketopantoate reductase PanE/ApbA C terminal H9J99_13170 PF02558 Ketopantoate reductase PanE/ApbA H9J99_13175 PF01965 DJ-1/PfpI family H9J99_13180 PF00266 Aminotransferase class-V H9J99_13190 PF02657 Fe-S metabolism associated domain H9J99_13195 PF00899 ThiF family H9J99_13200 PF03562 MltA specific insert domain H9J99_13200 PF06725 3D domain H9J99_13210 PF00696 Amino acid kinase family H9J99_13210 PF00583 Acetyltransferase (GNAT) family H9J99_13230 PF13538 UvrD-like helicase C-terminal domain H9J99_13235 PF12705 PD-(D/E)XK nuclease superfamily H9J99_13235 PF00580 UvrD/REP helicase N-terminal domain H9J99_13235 PF13361 UvrD-like helicase C-terminal domain H9J99_13240 PF17946 RecC C-terminal domain H9J99_13245 PF11893 Domain of unknown function (DUF3413) H9J99_13245 PF00884 Sulfatase H9J99_13255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_13255 PF03466 LysR substrate binding domain H9J99_13260 PF07130 YebG protein H9J99_13265 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle H9J99_13265 PF14602 Hexapeptide repeat of succinyl-transferase H9J99_13270 PF03009 Glycerophosphoryl diester phosphodiesterase family H9J99_13275 PF07690 Major Facilitator Superfamily H9J99_13280 PF00230 Major intrinsic protein H9J99_13285 PF00370 FGGY family of carbohydrate kinases, N-terminal domain H9J99_13285 PF02782 FGGY family of carbohydrate kinases, C-terminal domain H9J99_13290 PF08220 DeoR-like helix-turn-helix domain H9J99_13290 PF00455 DeoR C terminal sensor domain H9J99_13295 PF16901 C-terminal domain of alpha-glycerophosphate oxidase H9J99_13295 PF01266 FAD dependent oxidoreductase H9J99_13300 PF01544 CorA-like Mg2+ transporter protein H9J99_13320 PF01588 Putative tRNA binding domain H9J99_13325 PF00356 Bacterial regulatory proteins, lacI family H9J99_13340 PF00356 Bacterial regulatory proteins, lacI family H9J99_13345 PF01263 Aldose 1-epimerase H9J99_13350 PF00288 GHMP kinases N terminal domain H9J99_13350 PF10509 Galactokinase galactose-binding signature H9J99_13350 PF08544 GHMP kinases C terminal H9J99_13355 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain H9J99_13355 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain H9J99_13360 PF16363 GDP-mannose 4,6 dehydratase H9J99_13365 PF00356 Bacterial regulatory proteins, lacI family H9J99_13370 PF02837 Glycosyl hydrolases family 2, sugar binding domain H9J99_13370 PF02836 Glycosyl hydrolases family 2, TIM barrel domain H9J99_13370 PF00703 Glycosyl hydrolases family 2 H9J99_13370 PF16353 Domain of unknown function(DUF4981) H9J99_13370 PF02929 Beta galactosidase small chain H9J99_13375 PF04074 YhcH/YjgK/YiaL H9J99_13380 PF13520 Amino acid permease H9J99_13385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_13385 PF03466 LysR substrate binding domain H9J99_13415 PF00437 Type II/IV secretion system protein H9J99_13445 PF13629 Pilus formation protein N terminal region H9J99_13445 PF00263 Bacterial type II and III secretion system protein H9J99_13445 PF04972 BON domain H9J99_13470 PF12833 Helix-turn-helix domain H9J99_13470 PF02805 Metal binding domain of Ada H9J99_13475 PF00501 AMP-binding enzyme H9J99_13485 PF03466 LysR substrate binding domain H9J99_13485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_13490 PF03144 Elongation factor Tu domain 2 H9J99_13490 PF14492 Elongation Factor G, domain II H9J99_13490 PF03764 Elongation factor G, domain IV H9J99_13490 PF00679 Elongation factor G C-terminus H9J99_13490 PF00009 Elongation factor Tu GTP binding domain H9J99_13495 PF18073 Rubredoxin metal binding domain H9J99_13505 PF18429 Domain of unknown function (DUF5609) H9J99_13515 PF01048 Phosphorylase superfamily H9J99_13520 PF01676 Metalloenzyme superfamily H9J99_13525 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain H9J99_13525 PF00591 Glycosyl transferase family, a/b domain H9J99_13525 PF02885 Glycosyl transferase family, helical bundle domain H9J99_13530 PF01791 DeoC/LacD family aldolase H9J99_13535 PF01773 Na+ dependent nucleoside transporter N-terminus H9J99_13535 PF07670 Nucleoside recognition H9J99_13535 PF07662 Na+ dependent nucleoside transporter C-terminus H9J99_13540 PF01026 TatD related DNase H9J99_13550 PF03144 Elongation factor Tu domain 2 H9J99_13550 PF00009 Elongation factor Tu GTP binding domain H9J99_13550 PF16658 Class II release factor RF3, C-terminal domain H9J99_13570 PF13508 Acetyltransferase (GNAT) domain H9J99_13575 PF02036 SCP-2 sterol transfer family H9J99_13580 PF00563 EAL domain H9J99_13580 PF00990 Diguanylate cyclase, GGDEF domain H9J99_13580 PF03707 Bacterial signalling protein N terminal repeat H9J99_13585 PF01136 Peptidase family U32 H9J99_13590 PF01136 Peptidase family U32 H9J99_13595 PF01554 MatE H9J99_13605 PF07719 Tetratricopeptide repeat H9J99_13605 PF13181 Tetratricopeptide repeat H9J99_13610 PF01138 3' exoribonuclease family, domain 1 H9J99_13610 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain H9J99_13610 PF00575 S1 RNA binding domain H9J99_13610 PF03725 3' exoribonuclease family, domain 2 H9J99_13610 PF00013 KH domain H9J99_13615 PF00312 Ribosomal protein S15 H9J99_13620 PF09157 Pseudouridine synthase II TruB, C-terminal H9J99_13620 PF16198 tRNA pseudouridylate synthase B C-terminal domain H9J99_13620 PF01509 TruB family pseudouridylate synthase (N terminal domain) H9J99_13625 PF02033 Ribosome-binding factor A H9J99_13630 PF00009 Elongation factor Tu GTP binding domain H9J99_13630 PF11987 Translation-initiation factor 2 H9J99_13630 PF08364 Bacterial translation initiation factor IF-2 associated region H9J99_13630 PF04760 Translation initiation factor IF-2, N-terminal region H9J99_13635 PF13184 NusA-like KH domain H9J99_13635 PF08529 NusA N-terminal domain H9J99_13635 PF00575 S1 RNA binding domain H9J99_13640 PF02576 RimP N-terminal domain H9J99_13640 PF17384 RimP C-terminal SH3 domain H9J99_13655 PF03840 Preprotein translocase SecG subunit H9J99_13660 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H9J99_13660 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H9J99_13660 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H9J99_13660 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H9J99_13665 PF00809 Pterin binding enzyme H9J99_13670 PF01434 Peptidase family M41 H9J99_13670 PF17862 AAA+ lid domain H9J99_13670 PF00004 ATPase family associated with various cellular activities (AAA) H9J99_13670 PF06480 FtsH Extracellular H9J99_13675 PF01728 FtsJ-like methyltransferase H9J99_13680 PF01985 CRS1 / YhbY (CRM) domain H9J99_13685 PF01272 Transcription elongation factor, GreA/GreB, C-term H9J99_13685 PF03449 Transcription elongation factor, N-terminal H9J99_13690 PF13609 Gram-negative porin H9J99_13695 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family H9J99_13705 PF00579 tRNA synthetases class I (W and Y) H9J99_13710 PF01551 Peptidase family M23 H9J99_13710 PF08525 Opacity-associated protein A N-terminal motif H9J99_13710 PF01476 LysM domain H9J99_13715 PF00873 AcrB/AcrD/AcrF family H9J99_13725 PF01521 Iron-sulphur cluster biosynthesis H9J99_13730 PF00202 Aminotransferase class-III H9J99_13740 PF01594 AI-2E family transporter H9J99_13745 PF08468 Methyltransferase small domain N-terminal H9J99_13745 PF05175 Methyltransferase small domain H9J99_13750 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9J99_13750 PF00072 Response regulator receiver domain H9J99_13750 PF00512 His Kinase A (phospho-acceptor) domain H9J99_13750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9J99_13755 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9J99_13760 PF00528 Binding-protein-dependent transport system inner membrane component H9J99_13765 PF12911 N-terminal TM domain of oligopeptide transport permease C H9J99_13765 PF00528 Binding-protein-dependent transport system inner membrane component H9J99_13770 PF00005 ABC transporter H9J99_13770 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9J99_13775 PF00005 ABC transporter H9J99_13775 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9J99_13785 PF01869 BadF/BadG/BcrA/BcrD ATPase family H9J99_13790 PF00728 Glycosyl hydrolase family 20, catalytic domain H9J99_13790 PF02838 Glycosyl hydrolase family 20, domain 2 H9J99_13795 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain H9J99_13795 PF06165 Glycosyltransferase family 36 H9J99_13800 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H9J99_13800 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H9J99_13800 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H9J99_13800 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H9J99_13805 PF08402 TOBE domain H9J99_13805 PF00005 ABC transporter H9J99_13815 PF13416 Bacterial extracellular solute-binding protein H9J99_13820 PF00909 Ammonium Transporter Family H9J99_13825 PF00543 Nitrogen regulatory protein P-II H9J99_13830 PF06062 Uncharacterised protein family (UPF0231) H9J99_13835 PF00330 Aconitase family (aconitate hydratase) H9J99_13835 PF06434 Aconitate hydratase 2 N-terminus H9J99_13835 PF11791 Aconitate B N-terminal domain H9J99_13840 PF01734 Patatin-like phospholipase H9J99_13845 PF14814 Bifunctional transglycosylase second domain H9J99_13845 PF00912 Transglycosylase H9J99_13845 PF00905 Penicillin binding protein transpeptidase domain H9J99_13895 PF08482 ATP-dependent helicase C-terminal H9J99_13895 PF00271 Helicase conserved C-terminal domain H9J99_13895 PF04408 Helicase associated domain (HA2) H9J99_13895 PF00270 DEAD/DEAH box helicase H9J99_13900 PF17746 SfsA N-terminal OB domain H9J99_13900 PF03749 Sugar fermentation stimulation protein RE domain H9J99_13905 PF01258 Prokaryotic dksA/traR C4-type zinc finger H9J99_13910 PF00749 tRNA synthetases class I (E and Q), catalytic domain H9J99_13915 PF01743 Poly A polymerase head domain H9J99_13915 PF12626 Polymerase A arginine-rich C-terminus H9J99_13915 PF12627 Probable RNA and SrmB- binding site of polymerase A H9J99_13920 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) H9J99_13925 PF02548 Ketopantoate hydroxymethyltransferase H9J99_13930 PF02569 Pantoate-beta-alanine ligase H9J99_13935 PF03279 Bacterial lipid A biosynthesis acyltransferase H9J99_13940 PF01061 ABC-2 type transporter H9J99_13945 PF00005 ABC transporter H9J99_13950 PF00916 Sulfate permease family H9J99_13950 PF01740 STAS domain H9J99_13955 PF00484 Carbonic anhydrase H9J99_13960 PF00156 Phosphoribosyl transferase domain H9J99_13965 PF00440 Bacterial regulatory proteins, tetR family H9J99_13970 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9J99_13970 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H9J99_13975 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) H9J99_13975 PF00364 Biotin-requiring enzyme H9J99_13975 PF02817 e3 binding domain H9J99_13980 PF00456 Transketolase, thiamine diphosphate binding domain H9J99_13980 PF17831 Pyruvate dehydrogenase E1 component middle domain H9J99_13985 PF07729 FCD domain H9J99_13985 PF00392 Bacterial regulatory proteins, gntR family H9J99_13995 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain H9J99_13995 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain H9J99_14000 PF07963 Prokaryotic N-terminal methylation motif H9J99_14000 PF00114 Pilin (bacterial filament) H9J99_14005 PF00437 Type II/IV secretion system protein H9J99_14005 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain H9J99_14010 PF00482 Type II secretion system (T2SS), protein F H9J99_14015 PF01478 Type IV leader peptidase family H9J99_14015 PF06750 Bacterial Peptidase A24 N-terminal domain H9J99_14020 PF01121 Dephospho-CoA kinase H9J99_14025 PF07072 Cell division protein H9J99_14030 PF03884 DNA gyrase inhibitor YacG H9J99_14035 PF01245 Ribosomal protein L19 H9J99_14040 PF01746 tRNA (Guanine-1)-methyltransferase H9J99_14045 PF05239 PRC-barrel domain H9J99_14045 PF01782 RimM N-terminal domain H9J99_14050 PF00886 Ribosomal protein S16 H9J99_14055 PF02881 SRP54-type protein, helical bundle domain H9J99_14055 PF02978 Signal peptide binding domain H9J99_14055 PF00448 SRP54-type protein, GTPase domain H9J99_14060 PF01578 Cytochrome C assembly protein H9J99_14065 PF00571 CBS domain H9J99_14065 PF03471 Transporter associated domain H9J99_14065 PF01595 Cyclin M transmembrane N-terminal domain H9J99_14070 PF02664 S-Ribosylhomocysteinase (LuxS) H9J99_14080 PF04262 Glutamate-cysteine ligase H9J99_14085 PF00675 Insulinase (Peptidase family M16) H9J99_14085 PF05193 Peptidase M16 inactive domain H9J99_14090 PF09335 SNARE associated Golgi protein H9J99_14095 PF08240 Alcohol dehydrogenase GroES-like domain H9J99_14095 PF00107 Zinc-binding dehydrogenase H9J99_14105 PF00364 Biotin-requiring enzyme H9J99_14105 PF00682 HMGL-like H9J99_14105 PF02436 Conserved carboxylase domain H9J99_14110 PF04277 Oxaloacetate decarboxylase, gamma chain H9J99_14165 PF02599 Global regulator protein family H9J99_14170 PF00696 Amino acid kinase family H9J99_14170 PF01842 ACT domain H9J99_14170 PF13840 ACT domain H9J99_14175 PF02272 DHHA1 domain H9J99_14175 PF01411 tRNA synthetases class II (A) H9J99_14175 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain H9J99_14180 PF02631 RecX family H9J99_14185 PF00154 recA bacterial DNA recombination protein H9J99_14190 PF02464 Competence-damaged protein H9J99_14195 PF01624 MutS domain I H9J99_14195 PF05188 MutS domain II H9J99_14195 PF05192 MutS domain III H9J99_14195 PF05190 MutS family domain IV H9J99_14195 PF00488 MutS domain V H9J99_14200 PF00140 Sigma-70 factor, region 1.2 H9J99_14200 PF04542 Sigma-70 region 2 H9J99_14200 PF04539 Sigma-70 region 3 H9J99_14200 PF04545 Sigma-70, region 4 H9J99_14205 PF01476 LysM domain H9J99_14205 PF01551 Peptidase family M23 H9J99_14215 PF01975 Survival protein SurE H9J99_14220 PF01142 tRNA pseudouridine synthase D (TruD) H9J99_14225 PF02542 YgbB family H9J99_14230 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase H9J99_14235 PF04977 Septum formation initiator H9J99_14240 PF03952 Enolase, N-terminal domain H9J99_14240 PF00113 Enolase, C-terminal TIM barrel domain H9J99_14245 PF06418 CTP synthase N-terminus H9J99_14245 PF00117 Glutamine amidotransferase class-I H9J99_14250 PF03819 MazG nucleotide pyrophosphohydrolase domain H9J99_14255 PF13291 ACT domain H9J99_14255 PF04607 Region found in RelA / SpoT proteins H9J99_14255 PF02824 TGS domain H9J99_14260 PF01938 TRAM domain H9J99_14260 PF05958 tRNA (Uracil-5-)-methyltransferase H9J99_14265 PF00672 HAMP domain H9J99_14265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9J99_14265 PF00512 His Kinase A (phospho-acceptor) domain H9J99_14265 PF01627 Hpt domain H9J99_14265 PF00072 Response regulator receiver domain H9J99_14265 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) H9J99_14270 PF01648 4'-phosphopantetheinyl transferase superfamily H9J99_14275 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ H9J99_14280 PF11967 Recombination protein O N terminal H9J99_14280 PF02565 Recombination protein O C terminal H9J99_14285 PF07650 KH domain H9J99_14285 PF01926 50S ribosome-binding GTPase H9J99_14290 PF00035 Double-stranded RNA binding motif H9J99_14290 PF14622 Ribonuclease-III-like H9J99_14295 PF10502 Signal peptidase, peptidase S26 H9J99_14300 PF00679 Elongation factor G C-terminus H9J99_14300 PF00009 Elongation factor Tu GTP binding domain H9J99_14300 PF03144 Elongation factor Tu domain 2 H9J99_14300 PF06421 GTP-binding protein LepA C-terminus H9J99_14310 PF03888 MucB/RseB N-terminal domain H9J99_14310 PF17188 MucB/RseB C-terminal domain H9J99_14315 PF03873 Anti sigma-E protein RseA, C-terminal domain H9J99_14315 PF03872 Anti sigma-E protein RseA, N-terminal domain H9J99_14320 PF04542 Sigma-70 region 2 H9J99_14320 PF08281 Sigma-70, region 4 H9J99_14325 PF00890 FAD binding domain H9J99_14325 PF02910 Fumarate reductase flavoprotein C-term H9J99_14330 PF03937 Flavinator of succinate dehydrogenase H9J99_14335 PF01571 Aminomethyltransferase folate-binding domain H9J99_14350 PF01494 FAD binding domain H9J99_14355 PF01494 FAD binding domain H9J99_14360 PF03695 Uncharacterised protein family (UPF0149) H9J99_14365 PF05164 Cell division protein ZapA H9J99_14375 PF01812 5-formyltetrahydrofolate cyclo-ligase family H9J99_14380 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) H9J99_14385 PF01842 ACT domain H9J99_14385 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H9J99_14385 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H9J99_14390 PF04402 Protein of unknown function (DUF541) H9J99_14395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_14395 PF03466 LysR substrate binding domain H9J99_14400 PF01810 LysE type translocator H9J99_14405 PF04073 Aminoacyl-tRNA editing domain H9J99_14415 PF00924 Mechanosensitive ion channel H9J99_14415 PF05552 Conserved TM helix H9J99_14420 PF01116 Fructose-bisphosphate aldolase class-II H9J99_14425 PF00162 Phosphoglycerate kinase H9J99_14430 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain H9J99_14430 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain H9J99_14435 PF07715 TonB-dependent Receptor Plug Domain H9J99_14435 PF00593 TonB dependent receptor H9J99_14440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_14440 PF03466 LysR substrate binding domain H9J99_14445 PF00456 Transketolase, thiamine diphosphate binding domain H9J99_14445 PF02780 Transketolase, C-terminal domain H9J99_14445 PF02779 Transketolase, pyrimidine binding domain H9J99_14450 PF02773 S-adenosylmethionine synthetase, C-terminal domain H9J99_14450 PF02772 S-adenosylmethionine synthetase, central domain H9J99_14450 PF00438 S-adenosylmethionine synthetase, N-terminal domain H9J99_14460 PF10263 SprT-like family H9J99_14460 PF17283 SprT-like zinc ribbon domain H9J99_14465 PF04231 Endonuclease I H9J99_14470 PF04452 RNA methyltransferase H9J99_14475 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain H9J99_14475 PF02951 Prokaryotic glutathione synthetase, N-terminal domain H9J99_14480 PF02622 Uncharacterized ACR, COG1678 H9J99_14485 PF03652 Holliday junction resolvase H9J99_14490 PF00437 Type II/IV secretion system protein H9J99_14495 PF00437 Type II/IV secretion system protein H9J99_14500 PF01168 Alanine racemase, N-terminal domain H9J99_14505 PF03807 NADP oxidoreductase coenzyme F420-dependent H9J99_14505 PF14748 Pyrroline-5-carboxylate reductase dimerisation H9J99_14510 PF02325 YGGT family H9J99_14515 PF02594 Uncharacterised ACR, YggU family COG1872 H9J99_14525 PF01725 Ham1 family H9J99_14530 PF06969 HemN C-terminal domain H9J99_14530 PF04055 Radical SAM superfamily H9J99_14535 PF04960 Glutaminase H9J99_14540 PF02086 D12 class N6 adenine-specific DNA methyltransferase H9J99_14545 PF02390 Putative methyltransferase H9J99_14550 PF00633 Helix-hairpin-helix motif H9J99_14550 PF14815 NUDIX domain H9J99_14550 PF00730 HhH-GPD superfamily base excision DNA repair protein H9J99_14555 PF04362 Bacterial Fe(2+) trafficking H9J99_14560 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain H9J99_14560 PF01464 Transglycosylase SLT domain H9J99_14630 PF00171 Aldehyde dehydrogenase family H9J99_14675 PF00072 Response regulator receiver domain H9J99_14680 PF00356 Bacterial regulatory proteins, lacI family H9J99_14680 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family H9J99_14685 PF04794 YdjC-like protein H9J99_14690 PF11975 Family 4 glycosyl hydrolase C-terminal domain H9J99_14690 PF02056 Family 4 glycosyl hydrolase H9J99_14695 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit H9J99_14700 PF02378 Phosphotransferase system, EIIC H9J99_14705 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit H9J99_14710 PF01522 Polysaccharide deacetylase H9J99_14750 PF01555 DNA methylase H9J99_14850 PF00106 short chain dehydrogenase H9J99_14855 PF10011 Predicted membrane protein (DUF2254) H9J99_14865 PF03739 Lipopolysaccharide export system permease LptF/LptG H9J99_14875 PF00883 Cytosol aminopeptidase family, catalytic domain H9J99_14875 PF02789 Cytosol aminopeptidase family, N-terminal domain H9J99_14880 PF04364 DNA polymerase III chi subunit, HolC H9J99_14885 PF08264 Anticodon-binding domain of tRNA H9J99_14885 PF10458 Valyl tRNA synthetase tRNA binding arm H9J99_14885 PF00133 tRNA synthetases class I (I, L, M and V) H9J99_14895 PF00583 Acetyltransferase (GNAT) family H9J99_14925 PF06877 Regulator of ribonuclease activity B H9J99_14935 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain H9J99_14935 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain H9J99_14945 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain H9J99_14945 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain H9J99_14950 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain H9J99_14950 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain H9J99_14955 PF01042 Endoribonuclease L-PSP H9J99_14960 PF01553 Acyltransferase H9J99_14965 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) H9J99_14970 PF01722 BolA-like protein H9J99_14980 PF05494 MlaC protein H9J99_14985 PF02470 MlaD protein H9J99_14990 PF02405 Permease MlaE H9J99_14995 PF00005 ABC transporter H9J99_15000 PF01699 Sodium/calcium exchanger protein H9J99_15005 PF01380 SIS domain H9J99_15005 PF00571 CBS domain H9J99_15015 PF03968 OstA-like protein H9J99_15020 PF00005 ABC transporter H9J99_15020 PF12399 Branched-chain amino acid ATP-binding cassette transporter H9J99_15025 PF00309 Sigma-54 factor, Activator interacting domain (AID) H9J99_15025 PF04963 Sigma-54 factor, core binding domain H9J99_15025 PF04552 Sigma-54, DNA binding domain H9J99_15030 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein H9J99_15035 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 H9J99_15040 PF03668 P-loop ATPase protein family H9J99_15045 PF00381 PTS HPr component phosphorylation site H9J99_15050 PF00571 CBS domain H9J99_15050 PF01769 Divalent cation transporter H9J99_15050 PF03448 MgtE intracellular N domain H9J99_15055 PF01523 Putative modulator of DNA gyrase H9J99_15060 PF04751 Protein of unknown function (DUF615) H9J99_15065 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H9J99_15065 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H9J99_15070 PF00849 RNA pseudouridylate synthase H9J99_15080 PF18337 RapA N-terminal Tudor like domain H9J99_15080 PF18339 RapA N-terminal Tudor like domain 1 H9J99_15080 PF12137 RNA polymerase recycling family C-terminal H9J99_15080 PF00176 SNF2 family N-terminal domain H9J99_15080 PF00271 Helicase conserved C-terminal domain H9J99_15085 PF02562 PhoH-like protein H9J99_15085 PF13638 PIN domain H9J99_15095 PF00795 Carbon-nitrogen hydrolase H9J99_15100 PF13116 Protein of unknown function H9J99_15100 PF13502 AsmA-like C-terminal region H9J99_15105 PF00575 S1 RNA binding domain H9J99_15105 PF10150 Ribonuclease E/G family H9J99_15110 PF02545 Maf-like protein H9J99_15115 PF04093 rod shape-determining protein MreD H9J99_15120 PF04085 rod shape-determining protein MreC H9J99_15160 PF00114 Pilin (bacterial filament) H9J99_15160 PF07963 Prokaryotic N-terminal methylation motif H9J99_15170 PF00482 Type II secretion system (T2SS), protein F H9J99_15175 PF00437 Type II/IV secretion system protein H9J99_15175 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain H9J99_15185 PF01471 Putative peptidoglycan binding domain H9J99_15185 PF13401 AAA domain H9J99_15190 PF03958 Bacterial type II/III secretion system short domain H9J99_15190 PF11741 AMIN domain H9J99_15190 PF00263 Bacterial type II and III secretion system protein H9J99_15190 PF07660 Secretin and TonB N terminus short domain H9J99_15210 PF00990 Diguanylate cyclase, GGDEF domain H9J99_15210 PF00563 EAL domain H9J99_15210 PF17157 Gammaproteobacterial periplasmic sensor domain H9J99_15215 PF00436 Single-strand binding protein family H9J99_15220 PF00196 Bacterial regulatory proteins, luxR family H9J99_15225 PF00483 Nucleotidyl transferase H9J99_15230 PF00005 ABC transporter H9J99_15230 PF17755 UvrA DNA-binding domain H9J99_15230 PF17760 UvrA interaction domain H9J99_15245 PF00266 Aminotransferase class-V H9J99_15250 PF00696 Amino acid kinase family H9J99_15250 PF01842 ACT domain H9J99_15255 PF02574 Homocysteine S-methyltransferase H9J99_15255 PF00809 Pterin binding enzyme H9J99_15255 PF02965 Vitamin B12 dependent methionine synthase, activation domain H9J99_15255 PF02607 B12 binding domain H9J99_15255 PF02310 B12 binding domain H9J99_15260 PF00999 Sodium/hydrogen exchanger family H9J99_15330 PF01507 Phosphoadenosine phosphosulfate reductase family H9J99_15335 PF01077 Nitrite and sulphite reductase 4Fe-4S domain H9J99_15335 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain H9J99_15340 PF00667 FAD binding domain H9J99_15340 PF00258 Flavodoxin H9J99_15340 PF00175 Oxidoreductase NAD-binding domain H9J99_15360 PF01207 Dihydrouridine synthase (Dus) H9J99_15365 PF01475 Ferric uptake regulator family H9J99_15375 PF00342 Phosphoglucose isomerase H9J99_15380 PF01894 Uncharacterised protein family UPF0047 H9J99_15390 PF00842 Alanine racemase, C-terminal domain H9J99_15390 PF01168 Alanine racemase, N-terminal domain H9J99_15395 PF03796 DnaB-like helicase C terminal domain H9J99_15395 PF00772 DnaB-like helicase N terminal domain H9J99_15405 PF03948 Ribosomal protein L9, C-terminal domain H9J99_15405 PF01281 Ribosomal protein L9, N-terminal domain H9J99_15410 PF01084 Ribosomal protein S18 H9J99_15415 PF00436 Single-strand binding protein family H9J99_15420 PF01250 Ribosomal protein S6 H9J99_15425 PF00834 Ribulose-phosphate 3 epimerase family H9J99_15430 PF02086 D12 class N6 adenine-specific DNA methyltransferase H9J99_15440 PF01761 3-dehydroquinate synthase H9J99_15445 PF01202 Shikimate kinase H9J99_15450 PF03958 Bacterial type II/III secretion system short domain H9J99_15450 PF07660 Secretin and TonB N terminus short domain H9J99_15450 PF11741 AMIN domain H9J99_15450 PF00263 Bacterial type II and III secretion system protein H9J99_15455 PF04351 Pilus assembly protein, PilP H9J99_15465 PF05137 Fimbrial assembly protein (PilN) H9J99_15475 PF00912 Transglycosylase H9J99_15475 PF00905 Penicillin binding protein transpeptidase domain H9J99_15475 PF17092 Penicillin-binding protein OB-like domain H9J99_15480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_15480 PF03466 LysR substrate binding domain H9J99_15485 PF08534 Redoxin H9J99_15485 PF00462 Glutaredoxin H9J99_15495 PF14698 Argininosuccinate lyase C-terminal H9J99_15495 PF00583 Acetyltransferase (GNAT) family H9J99_15495 PF00206 Lyase H9J99_15500 PF00764 Arginosuccinate synthase H9J99_15505 PF00696 Amino acid kinase family H9J99_15510 PF01118 Semialdehyde dehydrogenase, NAD binding domain H9J99_15510 PF02774 Semialdehyde dehydrogenase, dimerisation domain H9J99_15515 PF07687 Peptidase dimerisation domain H9J99_15515 PF01546 Peptidase family M20/M25/M40 H9J99_15520 PF00311 Phosphoenolpyruvate carboxylase H9J99_15530 PF02219 Methylenetetrahydrofolate reductase H9J99_15535 PF00742 Homoserine dehydrogenase H9J99_15535 PF03447 Homoserine dehydrogenase, NAD binding domain H9J99_15535 PF00696 Amino acid kinase family H9J99_15540 PF01053 Cys/Met metabolism PLP-dependent enzyme H9J99_15550 PF00390 Malic enzyme, N-terminal domain H9J99_15550 PF03949 Malic enzyme, NAD binding domain H9J99_15555 PF00210 Ferritin-like domain H9J99_15560 PF04324 BFD-like [2Fe-2S] binding domain H9J99_15565 PF00009 Elongation factor Tu GTP binding domain H9J99_15565 PF03144 Elongation factor Tu domain 2 H9J99_15565 PF03143 Elongation factor Tu C-terminal domain H9J99_15570 PF03144 Elongation factor Tu domain 2 H9J99_15570 PF00009 Elongation factor Tu GTP binding domain H9J99_15570 PF14492 Elongation Factor G, domain II H9J99_15570 PF00679 Elongation factor G C-terminus H9J99_15570 PF03764 Elongation factor G, domain IV H9J99_15575 PF00177 Ribosomal protein S7p/S5e H9J99_15580 PF00164 Ribosomal protein S12/S23 H9J99_15585 PF04077 DsrH like protein H9J99_15590 PF02635 DsrE/DsrF-like family H9J99_15595 PF02635 DsrE/DsrF-like family H9J99_15600 PF13309 HTH domain H9J99_15600 PF08348 YheO-like PAS domain H9J99_15605 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase H9J99_15605 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H9J99_15615 PF04102 SlyX H9J99_15620 PF01112 Asparaginase H9J99_15625 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H9J99_15635 PF02254 TrkA-N domain H9J99_15635 PF00999 Sodium/hydrogen exchanger family H9J99_15640 PF02525 Flavodoxin-like fold H9J99_15645 PF00005 ABC transporter H9J99_15645 PF12848 ABC transporter H9J99_15655 PF00561 alpha/beta hydrolase fold H9J99_15660 PF06794 Uncharacterised protein family (UPF0270) H9J99_15665 PF00485 Phosphoribulokinase / Uridine kinase family H9J99_15670 PF00027 Cyclic nucleotide-binding domain H9J99_15670 PF13545 Crp-like helix-turn-helix domain H9J99_15680 PF00171 Aldehyde dehydrogenase family H9J99_15685 PF04958 Arginine N-succinyltransferase beta subunit H9J99_15690 PF00202 Aminotransferase class-III H9J99_15695 PF00117 Glutamine amidotransferase class-I H9J99_15710 PF00579 tRNA synthetases class I (W and Y) H9J99_15715 PF13419 Haloacid dehalogenase-like hydrolase H9J99_15720 PF08032 RNA 2'-O ribose methyltransferase substrate binding H9J99_15720 PF00588 SpoU rRNA Methylase family H9J99_15725 PF17876 Cold shock domain H9J99_15725 PF08461 Ribonuclease R winged-helix domain H9J99_15725 PF08206 Ribonuclease B OB domain H9J99_15725 PF00773 RNB domain H9J99_15725 PF00575 S1 RNA binding domain H9J99_15730 PF02082 Transcriptional regulator H9J99_15735 PF00970 Oxidoreductase FAD-binding domain H9J99_15735 PF00042 Globin H9J99_15735 PF00175 Oxidoreductase NAD-binding domain H9J99_15740 PF08238 Sel1 repeat H9J99_15745 PF00709 Adenylosuccinate synthetase H9J99_15750 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) H9J99_15755 PF01145 SPFH domain / Band 7 family H9J99_15760 PF12221 Bacterial membrane protein N terminal H9J99_15760 PF01145 SPFH domain / Band 7 family H9J99_15765 PF16360 GTP-binding GTPase Middle Region H9J99_15765 PF13167 GTP-binding GTPase N-terminal H9J99_15765 PF01926 50S ribosome-binding GTPase H9J99_15770 PF17209 Hfq protein H9J99_15780 PF01119 DNA mismatch repair protein, C-terminal domain H9J99_15780 PF08676 MutL C terminal dimerisation domain H9J99_15785 PF01520 N-acetylmuramoyl-L-alanine amidase H9J99_15790 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE H9J99_15795 PF08331 Domain of unknown function (DUF1730) H9J99_15870 PF03193 RsgA GTPase H9J99_15875 PF02666 Phosphatidylserine decarboxylase H9J99_15880 PF00939 Sodium:sulfate symporter transmembrane region H9J99_15885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9J99_15885 PF00672 HAMP domain H9J99_15895 PF06415 BPG-independent PGAM N-terminus (iPGM_N) H9J99_15895 PF01676 Metalloenzyme superfamily H9J99_15900 PF00581 Rhodanese-like domain H9J99_15905 PF02556 Preprotein translocase subunit SecB H9J99_15910 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus H9J99_15910 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus H9J99_15915 PF00132 Bacterial transferase hexapeptide (six repeats) H9J99_15915 PF06426 Serine acetyltransferase, N-terminal H9J99_15920 PF01551 Peptidase family M23 H9J99_15930 PF00440 Bacterial regulatory proteins, tetR family H9J99_15930 PF08360 QacR-like protein, C-terminal region H9J99_15940 PF00152 tRNA synthetases class II (D, K and N) H9J99_15945 PF00890 FAD binding domain H9J99_15945 PF02910 Fumarate reductase flavoprotein C-term H9J99_15950 PF13183 4Fe-4S dicluster domain H9J99_15950 PF13085 2Fe-2S iron-sulfur cluster binding domain H9J99_15955 PF02300 Fumarate reductase subunit C H9J99_15960 PF02313 Fumarate reductase subunit D H9J99_15970 PF01132 Elongation factor P (EF-P) OB domain H9J99_15970 PF08207 Elongation factor P (EF-P) KOW-like domain H9J99_15970 PF09285 Elongation factor P, C-terminal H9J99_15975 PF04055 Radical SAM superfamily H9J99_15980 PF00842 Alanine racemase, C-terminal domain H9J99_15980 PF01168 Alanine racemase, N-terminal domain H9J99_15985 PF02308 MgtC family H9J99_15995 PF00118 TCP-1/cpn60 chaperonin family H9J99_16000 PF00166 Chaperonin 10 Kd subunit H9J99_16005 PF01554 MatE H9J99_16010 PF00365 Phosphofructokinase H9J99_16015 PF01545 Cation efflux family H9J99_16015 PF16916 Dimerisation domain of Zinc Transporter H9J99_16020 PF07813 LTXXQ motif family protein H9J99_16025 PF00072 Response regulator receiver domain H9J99_16025 PF00486 Transcriptional regulatory protein, C terminal H9J99_16030 PF16527 Two-component sensor protein CpxA, periplasmic domain H9J99_16030 PF00672 HAMP domain H9J99_16030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9J99_16030 PF00512 His Kinase A (phospho-acceptor) domain H9J99_16035 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain H9J99_16035 PF02777 Iron/manganese superoxide dismutases, C-terminal domain H9J99_16040 PF00588 SpoU rRNA Methylase family H9J99_16045 PF04186 FxsA cytoplasmic membrane protein H9J99_16050 PF10415 Fumarase C C-terminus H9J99_16050 PF00206 Lyase H9J99_16055 PF03605 Anaerobic c4-dicarboxylate membrane transporter H9J99_16060 PF11412 Disulphide bond corrector protein DsbC H9J99_16060 PF02683 Cytochrome C biogenesis protein transmembrane region H9J99_16065 PF00196 Bacterial regulatory proteins, luxR family H9J99_16065 PF00072 Response regulator receiver domain H9J99_16070 PF03471 Transporter associated domain H9J99_16070 PF00999 Sodium/hydrogen exchanger family H9J99_16070 PF02080 TrkA-C domain H9J99_16080 PF00474 Sodium:solute symporter family H9J99_16095 PF00206 Lyase H9J99_16095 PF10415 Fumarase C C-terminus H9J99_16100 PF00672 HAMP domain H9J99_16100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9J99_16100 PF00512 His Kinase A (phospho-acceptor) domain H9J99_16100 PF01627 Hpt domain H9J99_16100 PF00072 Response regulator receiver domain H9J99_16105 PF12832 MFS_1 like family H9J99_16120 PF16177 Acetyl-coenzyme A synthetase N-terminus H9J99_16120 PF00501 AMP-binding enzyme H9J99_16120 PF13193 AMP-binding enzyme C-terminal domain H9J99_16125 PF01220 Dehydroquinase class II H9J99_16130 PF00364 Biotin-requiring enzyme H9J99_16135 PF02785 Biotin carboxylase C-terminal domain H9J99_16135 PF00289 Biotin carboxylase, N-terminal domain H9J99_16135 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H9J99_16145 PF01207 Dihydrouridine synthase (Dus) H9J99_16150 PF02954 Bacterial regulatory protein, Fis family H9J99_16155 PF07690 Major Facilitator Superfamily H9J99_16160 PF00005 ABC transporter H9J99_16160 PF12848 ABC transporter H9J99_16165 PF05230 MASE2 domain H9J99_16165 PF00990 Diguanylate cyclase, GGDEF domain H9J99_16230 PF01276 Orn/Lys/Arg decarboxylase, major domain H9J99_16230 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain H9J99_16230 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain H9J99_16235 PF13520 Amino acid permease H9J99_16240 PF00486 Transcriptional regulatory protein, C terminal H9J99_16240 PF18500 CadC C-terminal domain 1 H9J99_16245 PF13411 MerR HTH family regulatory protein H9J99_16250 PF01808 AICARFT/IMPCHase bienzyme H9J99_16250 PF02142 MGS-like domain H9J99_16255 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain H9J99_16255 PF02843 Phosphoribosylglycinamide synthetase, C domain H9J99_16255 PF02844 Phosphoribosylglycinamide synthetase, N domain H9J99_16265 PF00216 Bacterial DNA-binding protein H9J99_16270 PF00571 CBS domain H9J99_16270 PF01595 Cyclin M transmembrane N-terminal domain H9J99_16275 PF04222 Protein of unknown function (DUF416) H9J99_16280 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H9J99_16285 PF03167 Uracil DNA glycosylase superfamily H9J99_16290 PF01208 Uroporphyrinogen decarboxylase (URO-D) H9J99_16305 PF00293 NUDIX domain H9J99_16305 PF09297 NADH pyrophosphatase zinc ribbon domain H9J99_16310 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ H9J99_16315 PF04983 RNA polymerase Rpb1, domain 3 H9J99_16315 PF04997 RNA polymerase Rpb1, domain 1 H9J99_16315 PF00623 RNA polymerase Rpb1, domain 2 H9J99_16315 PF04998 RNA polymerase Rpb1, domain 5 H9J99_16315 PF05000 RNA polymerase Rpb1, domain 4 H9J99_16320 PF04560 RNA polymerase Rpb2, domain 7 H9J99_16320 PF00562 RNA polymerase Rpb2, domain 6 H9J99_16320 PF10385 RNA polymerase beta subunit external 1 domain H9J99_16320 PF04565 RNA polymerase Rpb2, domain 3 H9J99_16320 PF04561 RNA polymerase Rpb2, domain 2 H9J99_16320 PF04563 RNA polymerase beta subunit H9J99_16325 PF16320 Ribosomal protein L7/L12 dimerisation domain H9J99_16325 PF00542 Ribosomal protein L7/L12 C-terminal domain H9J99_16330 PF00466 Ribosomal protein L10 H9J99_16335 PF00687 Ribosomal protein L1p/L10e family H9J99_16340 PF03946 Ribosomal protein L11, N-terminal domain H9J99_16340 PF00298 Ribosomal protein L11, RNA binding domain H9J99_16345 PF00467 KOW motif H9J99_16345 PF02357 Transcription termination factor nusG H9J99_16350 PF00584 SecE/Sec61-gamma subunits of protein translocation complex H9J99_16355 PF00009 Elongation factor Tu GTP binding domain H9J99_16355 PF03144 Elongation factor Tu domain 2 H9J99_16355 PF03143 Elongation factor Tu C-terminal domain H9J99_16380 PF00485 Phosphoribulokinase / Uridine kinase family H9J99_16385 PF02237 Biotin protein ligase C terminal domain H9J99_16385 PF03099 Biotin/lipoate A/B protein ligase family H9J99_16385 PF08279 HTH domain H9J99_16390 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain H9J99_16390 PF01565 FAD binding domain H9J99_16400 PF13091 PLD-like domain H9J99_16435 PF00561 alpha/beta hydrolase fold H9J99_16440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_16440 PF03466 LysR substrate binding domain H9J99_16445 PF14031 Putative serine dehydratase domain H9J99_16445 PF01168 Alanine racemase, N-terminal domain H9J99_16450 PF02423 Ornithine cyclodeaminase/mu-crystallin family H9J99_16475 PF00313 'Cold-shock' DNA-binding domain H9J99_16495 PF00665 Integrase core domain H9J99_16495 PF13936 Helix-turn-helix domain H9J99_16505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_16505 PF03466 LysR substrate binding domain H9J99_16530 PF00583 Acetyltransferase (GNAT) family H9J99_16530 PF00814 Glycoprotease family H9J99_16545 PF03606 C4-dicarboxylate anaerobic carrier H9J99_16550 PF04011 LemA family H9J99_16555 PF01435 Peptidase family M48 H9J99_16570 PF18081 Fanconi anemia-associated nuclease SAP domain H9J99_16570 PF08774 VRR-NUC domain H9J99_16580 PF04055 Radical SAM superfamily H9J99_16580 PF13186 Iron-sulfur cluster-binding domain H9J99_16595 PF04076 Bacterial OB fold (BOF) protein H9J99_16600 PF00781 Diacylglycerol kinase catalytic domain H9J99_16605 PF03466 LysR substrate binding domain H9J99_16605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_16610 PF01872 RibD C-terminal domain H9J99_16610 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region H9J99_16625 PF00092 von Willebrand factor type A domain H9J99_16640 PF07726 ATPase family associated with various cellular activities (AAA) H9J99_16640 PF17863 AAA lid domain H9J99_16645 PF13186 Iron-sulfur cluster-binding domain H9J99_16645 PF04055 Radical SAM superfamily H9J99_16650 PF00884 Sulfatase H9J99_16655 PF03466 LysR substrate binding domain H9J99_16655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_16665 PF00884 Sulfatase H9J99_16670 PF00884 Sulfatase H9J99_16670 PF16385 Domain of unknown function H9J99_16675 PF00486 Transcriptional regulatory protein, C terminal H9J99_16675 PF00072 Response regulator receiver domain H9J99_16690 PF00672 HAMP domain H9J99_16690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9J99_16690 PF00512 His Kinase A (phospho-acceptor) domain H9J99_16690 PF01627 Hpt domain H9J99_16690 PF00072 Response regulator receiver domain H9J99_16695 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family H9J99_16700 PF02142 MGS-like domain H9J99_16705 PF13361 UvrD-like helicase C-terminal domain H9J99_16705 PF00580 UvrD/REP helicase N-terminal domain H9J99_16705 PF12462 DNA helicase IV / RNA helicase N terminal H9J99_16710 PF12805 FUSC-like inner membrane protein yccS H9J99_16740 PF07715 TonB-dependent Receptor Plug Domain H9J99_16740 PF00593 TonB dependent receptor H9J99_16750 PF13411 MerR HTH family regulatory protein H9J99_16755 PF00005 ABC transporter H9J99_16760 PF01032 FecCD transport family H9J99_16765 PF01032 FecCD transport family H9J99_16770 PF01497 Periplasmic binding protein H9J99_16780 PF01048 Phosphorylase superfamily H9J99_16785 PF04973 Nicotinamide mononucleotide transporter H9J99_16795 PF00356 Bacterial regulatory proteins, lacI family H9J99_16800 PF00294 pfkB family carbohydrate kinase H9J99_16805 PF13407 Periplasmic binding protein domain H9J99_16810 PF02653 Branched-chain amino acid transport system / permease component H9J99_16815 PF00005 ABC transporter H9J99_16820 PF05025 RbsD / FucU transport protein family H9J99_16825 PF00563 EAL domain H9J99_16825 PF00990 Diguanylate cyclase, GGDEF domain H9J99_16830 PF01048 Phosphorylase superfamily H9J99_16870 PF04116 Fatty acid hydroxylase superfamily H9J99_16885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9J99_16885 PF00512 His Kinase A (phospho-acceptor) domain H9J99_16885 PF09308 LuxQ, periplasmic H9J99_16885 PF00072 Response regulator receiver domain H9J99_16890 PF03150 Di-haem cytochrome c peroxidase H9J99_16890 PF00034 Cytochrome c H9J99_16895 PF00990 Diguanylate cyclase, GGDEF domain H9J99_16895 PF03707 Bacterial signalling protein N terminal repeat H9J99_16895 PF13188 PAS domain H9J99_16895 PF00563 EAL domain H9J99_16905 PF01145 SPFH domain / Band 7 family H9J99_16905 PF16200 C-terminal region of band_7 H9J99_16920 PF00571 CBS domain H9J99_16920 PF00005 ABC transporter H9J99_16925 PF00528 Binding-protein-dependent transport system inner membrane component H9J99_16930 PF04069 Substrate binding domain of ABC-type glycine betaine transport system H9J99_16950 PF00171 Aldehyde dehydrogenase family H9J99_16955 PF13977 BetI-type transcriptional repressor, C-terminal H9J99_16955 PF00440 Bacterial regulatory proteins, tetR family H9J99_16960 PF17151 Periplasmic sensor domain H9J99_16960 PF00990 Diguanylate cyclase, GGDEF domain H9J99_16970 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H9J99_16970 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase H9J99_16980 PF00378 Enoyl-CoA hydratase/isomerase H9J99_16985 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H9J99_16985 PF02770 Acyl-CoA dehydrogenase, middle domain H9J99_16985 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H9J99_16990 PF00171 Aldehyde dehydrogenase family H9J99_16995 PF00108 Thiolase, N-terminal domain H9J99_16995 PF02803 Thiolase, C-terminal domain H9J99_17000 PF00376 MerR family regulatory protein H9J99_17000 PF09278 MerR, DNA binding H9J99_17005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H9J99_17005 PF02770 Acyl-CoA dehydrogenase, middle domain H9J99_17005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H9J99_17010 PF01039 Carboxyl transferase domain H9J99_17015 PF00378 Enoyl-CoA hydratase/isomerase H9J99_17020 PF00289 Biotin carboxylase, N-terminal domain H9J99_17020 PF02785 Biotin carboxylase C-terminal domain H9J99_17020 PF00364 Biotin-requiring enzyme H9J99_17020 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain H9J99_17020 PF18140 Propionyl-coenzyme A carboxylase BT domain H9J99_17025 PF00682 HMGL-like H9J99_17030 PF00072 Response regulator receiver domain H9J99_17030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9J99_17030 PF00672 HAMP domain H9J99_17030 PF00512 His Kinase A (phospho-acceptor) domain H9J99_17030 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) H9J99_17030 PF01627 Hpt domain H9J99_17045 PF12794 Mechanosensitive ion channel inner membrane domain 1 H9J99_17045 PF00924 Mechanosensitive ion channel H9J99_17045 PF12795 Mechanosensitive ion channel porin domain H9J99_17050 PF14602 Hexapeptide repeat of succinyl-transferase H9J99_17050 PF12464 Maltose acetyltransferase H9J99_17055 PF00392 Bacterial regulatory proteins, gntR family H9J99_17055 PF00155 Aminotransferase class I and II H9J99_17060 PF01654 Cytochrome bd terminal oxidase subunit I H9J99_17065 PF02322 Cytochrome bd terminal oxidase subunit II H9J99_17075 PF02627 Carboxymuconolactone decarboxylase family H9J99_17080 PF13411 MerR HTH family regulatory protein H9J99_17090 PF00034 Cytochrome c H9J99_17095 PF05724 Thiopurine S-methyltransferase (TPMT) H9J99_17100 PF00501 AMP-binding enzyme H9J99_17100 PF14535 AMP-binding enzyme C-terminal domain H9J99_17105 PF00005 ABC transporter H9J99_17130 PF12399 Branched-chain amino acid ATP-binding cassette transporter H9J99_17130 PF00005 ABC transporter H9J99_17140 PF01012 Electron transfer flavoprotein domain H9J99_17145 PF00766 Electron transfer flavoprotein FAD-binding domain H9J99_17145 PF01012 Electron transfer flavoprotein domain H9J99_17150 PF13193 AMP-binding enzyme C-terminal domain H9J99_17150 PF00501 AMP-binding enzyme H9J99_17170 PF13358 DDE superfamily endonuclease H9J99_17230 PF06834 TraU protein H9J99_17245 PF06986 Type-1V conjugative transfer system mating pair stabilisation H9J99_17285 PF10609 NUBPL iron-transfer P-loop NTPase H9J99_17300 PF01548 Transposase H9J99_17300 PF02371 Transposase IS116/IS110/IS902 family H9J99_17320 PF10412 Type IV secretion-system coupling protein DNA-binding domain H9J99_17320 PF12615 F sex factor protein N terminal H9J99_17330 PF04231 Endonuclease I H9J99_17350 PF18340 DNA relaxase TraI 2B/2B-like domain H9J99_17350 PF08751 TrwC relaxase H9J99_17350 PF07057 DNA helicase TraI H9J99_17350 PF18272 single-stranded DNA binding TraI N-terminal subdomain H9J99_17410 PF00465 Iron-containing alcohol dehydrogenase H9J99_17425 PF01965 DJ-1/PfpI family H9J99_17440 PF00465 Iron-containing alcohol dehydrogenase H9J99_17445 PF00171 Aldehyde dehydrogenase family H9J99_17455 PF00563 EAL domain H9J99_17455 PF00990 Diguanylate cyclase, GGDEF domain H9J99_17455 PF13426 PAS domain H9J99_17480 PF01609 Transposase DDE domain H9J99_17480 PF13006 Insertion element 4 transposase N-terminal H9J99_17485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9J99_17510 PF13737 Transposase DDE domain H9J99_17540 PF06892 Phage regulatory protein CII (CP76) H9J99_17565 PF01695 IstB-like ATP binding protein H9J99_17595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9J99_17595 PF00989 PAS fold H9J99_17595 PF00512 His Kinase A (phospho-acceptor) domain H9J99_17600 PF07669 Eco57I restriction-modification methylase H9J99_17605 PF00589 Phage integrase family H9J99_17610 PF00478 IMP dehydrogenase / GMP reductase domain H9J99_17615 PF01256 Carbohydrate kinase H9J99_17615 PF03853 YjeF-related protein N-terminus H9J99_17625 PF00072 Response regulator receiver domain H9J99_17630 PF00248 Aldo/keto reductase family H9J99_17645 PF00654 Voltage gated chloride channel H9J99_17655 PF01566 Natural resistance-associated macrophage protein H9J99_17660 PF01227 GTP cyclohydrolase I H9J99_17665 PF00994 Probable molybdopterin binding domain H9J99_17665 PF03454 MoeA C-terminal region (domain IV) H9J99_17665 PF03453 MoeA N-terminal region (domain I and II) H9J99_17670 PF00899 ThiF family H9J99_17690 PF00581 Rhodanese-like domain H9J99_17695 PF00563 EAL domain H9J99_17695 PF00990 Diguanylate cyclase, GGDEF domain H9J99_17695 PF03707 Bacterial signalling protein N terminal repeat H9J99_17700 PF00704 Glycosyl hydrolases family 18 H9J99_17700 PF08329 Chitinase A, N-terminal domain H9J99_17710 PF00923 Transaldolase/Fructose-6-phosphate aldolase H9J99_17715 PF02779 Transketolase, pyrimidine binding domain H9J99_17715 PF02780 Transketolase, C-terminal domain H9J99_17715 PF00456 Transketolase, thiamine diphosphate binding domain H9J99_17720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9J99_17720 PF08447 PAS fold H9J99_17725 PF07690 Major Facilitator Superfamily H9J99_17730 PF00793 DAHP synthetase I family H9J99_17735 PF00691 OmpA family H9J99_17735 PF01389 OmpA-like transmembrane domain H9J99_17740 PF13419 Haloacid dehalogenase-like hydrolase H9J99_17745 PF00472 RF-1 domain H9J99_17750 PF17200 Single Cache domain 2 H9J99_17750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9J99_17750 PF00672 HAMP domain H9J99_17755 PF00873 AcrB/AcrD/AcrF family H9J99_17760 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9J99_17765 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region H9J99_17770 PF07687 Peptidase dimerisation domain H9J99_17770 PF01546 Peptidase family M20/M25/M40 H9J99_17785 PF00196 Bacterial regulatory proteins, luxR family H9J99_17785 PF00072 Response regulator receiver domain H9J99_17790 PF00672 HAMP domain H9J99_17790 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term H9J99_17790 PF07730 Histidine kinase H9J99_17790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9J99_17795 PF12838 4Fe-4S dicluster domain H9J99_17795 PF13187 4Fe-4S dicluster domain H9J99_17805 PF01568 Molydopterin dinucleotide binding domain H9J99_17805 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H9J99_17805 PF00384 Molybdopterin oxidoreductase H9J99_17810 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) H9J99_17815 PF03264 NapC/NirT cytochrome c family, N-terminal region H9J99_17825 PF00561 alpha/beta hydrolase fold H9J99_17825 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus H9J99_17835 PF00108 Thiolase, N-terminal domain H9J99_17835 PF02803 Thiolase, C-terminal domain H9J99_17840 PF00106 short chain dehydrogenase H9J99_17850 PF01810 LysE type translocator H9J99_17860 PF02355 Protein export membrane protein H9J99_17860 PF07549 SecD/SecF GG Motif H9J99_17865 PF13721 SecD export protein N-terminal TM region H9J99_17865 PF02355 Protein export membrane protein H9J99_17865 PF07549 SecD/SecF GG Motif H9J99_17890 PF01037 Lrp/AsnC ligand binding domain H9J99_17910 PF00529 HlyD membrane-fusion protein of T1SS H9J99_17910 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9J99_17920 PF00512 His Kinase A (phospho-acceptor) domain H9J99_17920 PF09308 LuxQ, periplasmic H9J99_17920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9J99_17920 PF00072 Response regulator receiver domain H9J99_17925 PF13407 Periplasmic binding protein domain H9J99_17930 PF01541 GIY-YIG catalytic domain H9J99_17935 PF04337 Protein of unknown function, DUF480 H9J99_17945 PF04363 Protein of unknown function (DUF496) H9J99_17950 PF01554 MatE H9J99_17955 PF01408 Oxidoreductase family, NAD-binding Rossmann fold H9J99_17965 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain H9J99_17965 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain H9J99_17980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_17980 PF03466 LysR substrate binding domain H9J99_17985 PF13404 AsnC-type helix-turn-helix domain H9J99_17985 PF01037 Lrp/AsnC ligand binding domain H9J99_17990 PF13520 Amino acid permease H9J99_17995 PF00155 Aminotransferase class I and II H9J99_17995 PF00392 Bacterial regulatory proteins, gntR family H9J99_18005 PF03109 ABC1 family H9J99_18015 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin H9J99_18020 PF07969 Amidohydrolase family H9J99_18030 PF01966 HD domain H9J99_18040 PF07690 Major Facilitator Superfamily H9J99_18050 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase H9J99_18055 PF00255 Glutathione peroxidase H9J99_18070 PF01323 DSBA-like thioredoxin domain H9J99_18085 PF00106 short chain dehydrogenase H9J99_18090 PF00072 Response regulator receiver domain H9J99_18090 PF00486 Transcriptional regulatory protein, C terminal H9J99_18095 PF16527 Two-component sensor protein CpxA, periplasmic domain H9J99_18095 PF00672 HAMP domain H9J99_18095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9J99_18095 PF00512 His Kinase A (phospho-acceptor) domain H9J99_18105 PF01219 Prokaryotic diacylglycerol kinase H9J99_18110 PF08019 Phosphoethanolamine transferase EptA/EptB H9J99_18110 PF00884 Sulfatase H9J99_18115 PF01408 Oxidoreductase family, NAD-binding Rossmann fold H9J99_18140 PF01047 MarR family H9J99_18150 PF01734 Patatin-like phospholipase H9J99_18155 PF02678 Pirin H9J99_18155 PF05726 Pirin C-terminal cupin domain H9J99_18160 PF00313 'Cold-shock' DNA-binding domain H9J99_18170 PF00962 Adenosine/AMP deaminase H9J99_18175 PF08534 Redoxin H9J99_18175 PF00462 Glutaredoxin H9J99_18185 PF00768 D-alanyl-D-alanine carboxypeptidase H9J99_18185 PF07943 Penicillin-binding protein 5, C-terminal domain H9J99_18190 PF02798 Glutathione S-transferase, N-terminal domain H9J99_18195 PF08244 Glycosyl hydrolases family 32 C terminal H9J99_18195 PF00251 Glycosyl hydrolases family 32 N-terminal domain H9J99_18200 PF00294 pfkB family carbohydrate kinase H9J99_18205 PF02378 Phosphotransferase system, EIIC H9J99_18205 PF00367 phosphotransferase system, EIIB H9J99_18210 PF00356 Bacterial regulatory proteins, lacI family H9J99_18215 PF11471 Maltoporin periplasmic N-terminal extension H9J99_18215 PF02264 LamB porin H9J99_18260 PF01497 Periplasmic binding protein H9J99_18260 PF12833 Helix-turn-helix domain H9J99_18265 PF00155 Aminotransferase class I and II H9J99_18285 PF00271 Helicase conserved C-terminal domain H9J99_18285 PF00270 DEAD/DEAH box helicase H9J99_18295 PF03466 LysR substrate binding domain H9J99_18295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_18300 PF03466 LysR substrate binding domain H9J99_18300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_18310 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H9J99_18315 PF08240 Alcohol dehydrogenase GroES-like domain H9J99_18315 PF00107 Zinc-binding dehydrogenase H9J99_18330 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term H9J99_18330 PF12833 Helix-turn-helix domain H9J99_18335 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) H9J99_18350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_18350 PF03466 LysR substrate binding domain H9J99_18355 PF00709 Adenylosuccinate synthetase H9J99_18365 PF00710 Asparaginase, N-terminal H9J99_18365 PF17763 Glutaminase/Asparaginase C-terminal domain H9J99_18370 PF03618 Kinase/pyrophosphorylase H9J99_18375 PF00391 PEP-utilising enzyme, mobile domain H9J99_18375 PF02896 PEP-utilising enzyme, TIM barrel domain H9J99_18375 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain H9J99_18390 PF00579 tRNA synthetases class I (W and Y) H9J99_18395 PF13416 Bacterial extracellular solute-binding protein H9J99_18405 PF03466 LysR substrate binding domain H9J99_18405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_18410 PF13533 Biotin-lipoyl like H9J99_18430 PF07694 5TMR of 5TMR-LYT H9J99_18430 PF00990 Diguanylate cyclase, GGDEF domain H9J99_18440 PF00196 Bacterial regulatory proteins, luxR family H9J99_18445 PF02837 Glycosyl hydrolases family 2, sugar binding domain H9J99_18445 PF00703 Glycosyl hydrolases family 2 H9J99_18445 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 H9J99_18445 PF02836 Glycosyl hydrolases family 2, TIM barrel domain H9J99_18450 PF02028 BCCT, betaine/carnitine/choline family transporter H9J99_18455 PF00392 Bacterial regulatory proteins, gntR family H9J99_18455 PF07702 UTRA domain H9J99_18480 PF00005 ABC transporter H9J99_18480 PF08402 TOBE domain H9J99_18520 PF13533 Biotin-lipoyl like H9J99_18525 PF13091 PLD-like domain H9J99_18550 PF09278 MerR, DNA binding H9J99_18550 PF00376 MerR family regulatory protein H9J99_18560 PF03466 LysR substrate binding domain H9J99_18560 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_18570 PF13378 Enolase C-terminal domain-like H9J99_18570 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain H9J99_18575 PF00679 Elongation factor G C-terminus H9J99_18575 PF14492 Elongation Factor G, domain II H9J99_18575 PF03764 Elongation factor G, domain IV H9J99_18575 PF00009 Elongation factor Tu GTP binding domain H9J99_18575 PF03144 Elongation factor Tu domain 2 H9J99_18600 PF02001 Protein of unknown function DUF134 H9J99_18605 PF17185 NlpE C-terminal OB domain H9J99_18605 PF04170 NlpE N-terminal domain H9J99_18610 PF06629 MltA-interacting protein MipA H9J99_18620 PF00691 OmpA family H9J99_18620 PF01389 OmpA-like transmembrane domain H9J99_18625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_18625 PF03466 LysR substrate binding domain H9J99_18650 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain H9J99_18650 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family H9J99_18660 PF00857 Isochorismatase family H9J99_18670 PF06628 Catalase-related immune-responsive H9J99_18670 PF00199 Catalase H9J99_18680 PF08220 DeoR-like helix-turn-helix domain H9J99_18680 PF00455 DeoR C terminal sensor domain H9J99_18685 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H9J99_18690 PF01625 Peptide methionine sulfoxide reductase H9J99_18690 PF01641 SelR domain H9J99_18710 PF17678 Glycosyl hydrolase family 92 N-terminal domain H9J99_18710 PF07971 Glycosyl hydrolase family 92 H9J99_18715 PF17678 Glycosyl hydrolase family 92 N-terminal domain H9J99_18715 PF07971 Glycosyl hydrolase family 92 H9J99_18725 PF17678 Glycosyl hydrolase family 92 N-terminal domain H9J99_18725 PF07971 Glycosyl hydrolase family 92 H9J99_18730 PF07971 Glycosyl hydrolase family 92 H9J99_18730 PF17678 Glycosyl hydrolase family 92 N-terminal domain H9J99_18735 PF03060 Nitronate monooxygenase H9J99_18740 PF02872 5'-nucleotidase, C-terminal domain H9J99_18740 PF00149 Calcineurin-like phosphoesterase H9J99_18750 PF08359 YsiA-like protein, C-terminal region H9J99_18750 PF00440 Bacterial regulatory proteins, tetR family H9J99_18765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_18765 PF03466 LysR substrate binding domain H9J99_18785 PF00118 TCP-1/cpn60 chaperonin family H9J99_18790 PF00166 Chaperonin 10 Kd subunit H9J99_18795 PF00581 Rhodanese-like domain H9J99_18810 PF01070 FMN-dependent dehydrogenase H9J99_18830 PF00669 Bacterial flagellin N-terminal helical region H9J99_18840 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase H9J99_18840 PF10135 Rod binding protein H9J99_18845 PF02119 Flagellar P-ring protein H9J99_18850 PF02107 Flagellar L-ring protein H9J99_18855 PF00460 Flagella basal body rod protein H9J99_18855 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9J99_18860 PF00460 Flagella basal body rod protein H9J99_18860 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9J99_18865 PF00460 Flagella basal body rod protein H9J99_18865 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9J99_18865 PF07559 Flagellar basal body protein FlaE H9J99_18870 PF03963 Flagellar hook capping protein - N-terminal region H9J99_18870 PF13861 FlgD Tudor-like domain H9J99_18870 PF13860 FlgD Ig-like domain H9J99_18875 PF06429 Flagellar basal body rod FlgEFG protein C-terminal H9J99_18875 PF00460 Flagella basal body rod protein H9J99_18880 PF00460 Flagella basal body rod protein H9J99_18900 PF01464 Transglycosylase SLT domain H9J99_18905 PF08264 Anticodon-binding domain of tRNA H9J99_18905 PF00133 tRNA synthetases class I (I, L, M and V) H9J99_18925 PF03315 Serine dehydratase beta chain H9J99_18925 PF03313 Serine dehydratase alpha chain H9J99_18930 PF00854 POT family H9J99_18940 PF03466 LysR substrate binding domain H9J99_18940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_18950 PF03466 LysR substrate binding domain H9J99_18950 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_18955 PF01389 OmpA-like transmembrane domain H9J99_18955 PF00691 OmpA family H9J99_18960 PF18027 Cytosolic carboxypeptidase N-terminal domain H9J99_18960 PF00246 Zinc carboxypeptidase H9J99_18965 PF01266 FAD dependent oxidoreductase H9J99_18975 PF04393 Protein of unknown function (DUF535) H9J99_18990 PF07702 UTRA domain H9J99_18990 PF00392 Bacterial regulatory proteins, gntR family H9J99_18995 PF00528 Binding-protein-dependent transport system inner membrane component H9J99_19000 PF00005 ABC transporter H9J99_19015 PF00266 Aminotransferase class-V H9J99_19020 PF00202 Aminotransferase class-III H9J99_19025 PF13419 Haloacid dehalogenase-like hydrolase H9J99_19030 PF00356 Bacterial regulatory proteins, lacI family H9J99_19035 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 H9J99_19045 PF03611 PTS system sugar-specific permease component H9J99_19055 PF05922 Peptidase inhibitor I9 H9J99_19055 PF00082 Subtilase family H9J99_19060 PF00657 GDSL-like Lipase/Acylhydrolase H9J99_19065 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) H9J99_19070 PF00194 Eukaryotic-type carbonic anhydrase H9J99_19075 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) H9J99_19090 PF13419 Haloacid dehalogenase-like hydrolase H9J99_19095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_19095 PF03466 LysR substrate binding domain H9J99_19130 PF12464 Maltose acetyltransferase H9J99_19130 PF14602 Hexapeptide repeat of succinyl-transferase H9J99_19135 PF02566 OsmC-like protein H9J99_19145 PF11799 impB/mucB/samB family C-terminal domain H9J99_19145 PF13438 Domain of unknown function (DUF4113) H9J99_19145 PF00817 impB/mucB/samB family H9J99_19150 PF00717 Peptidase S24-like H9J99_19160 PF01555 DNA methylase H9J99_19165 PF04851 Type III restriction enzyme, res subunit H9J99_19455 PF02566 OsmC-like protein H9J99_19460 PF01641 SelR domain H9J99_19460 PF01625 Peptide methionine sulfoxide reductase H9J99_19475 PF04244 Deoxyribodipyrimidine photo-lyase-related protein H9J99_19480 PF03441 FAD binding domain of DNA photolyase H9J99_19480 PF00875 DNA photolyase H9J99_19485 PF00990 Diguanylate cyclase, GGDEF domain H9J99_19500 PF12729 Four helix bundle sensory module for signal transduction H9J99_19500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9J99_19500 PF00672 HAMP domain H9J99_19505 PF00990 Diguanylate cyclase, GGDEF domain H9J99_19505 PF05230 MASE2 domain H9J99_19510 PF13532 2OG-Fe(II) oxygenase superfamily H9J99_19520 PF07670 Nucleoside recognition H9J99_19520 PF07662 Na+ dependent nucleoside transporter C-terminus H9J99_19520 PF01773 Na+ dependent nucleoside transporter N-terminus H9J99_19535 PF01212 Beta-eliminating lyase H9J99_19545 PF01266 FAD dependent oxidoreductase H9J99_19560 PF05525 Branched-chain amino acid transport protein H9J99_19565 PF08448 PAS fold H9J99_19565 PF00990 Diguanylate cyclase, GGDEF domain H9J99_19570 PF02954 Bacterial regulatory protein, Fis family H9J99_19570 PF00072 Response regulator receiver domain H9J99_19570 PF00158 Sigma-54 interaction domain H9J99_19575 PF00512 His Kinase A (phospho-acceptor) domain H9J99_19575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9J99_19585 PF00232 Glycosyl hydrolase family 1 H9J99_19610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_19610 PF03466 LysR substrate binding domain H9J99_19615 PF08443 RimK-like ATP-grasp domain H9J99_19615 PF18030 RimK PreATP-grasp domain H9J99_19620 PF18030 RimK PreATP-grasp domain H9J99_19620 PF08443 RimK-like ATP-grasp domain H9J99_19625 PF00753 Metallo-beta-lactamase superfamily H9J99_19630 PF17810 Arginine decarboxylase helical bundle domain H9J99_19630 PF17944 Arginine decarboxylase C-terminal helical extension H9J99_19630 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain H9J99_19635 PF00491 Arginase family H9J99_19640 PF07690 Major Facilitator Superfamily H9J99_19645 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain H9J99_19645 PF00326 Prolyl oligopeptidase family H9J99_19660 PF00950 ABC 3 transport family H9J99_19665 PF00005 ABC transporter H9J99_19670 PF01297 Zinc-uptake complex component A periplasmic H9J99_19710 PF02472 Biopolymer transport protein ExbD/TolR H9J99_19715 PF01618 MotA/TolQ/ExbB proton channel family H9J99_19720 PF01618 MotA/TolQ/ExbB proton channel family H9J99_19730 PF00593 TonB dependent receptor H9J99_19730 PF07715 TonB-dependent Receptor Plug Domain H9J99_19735 PF00672 HAMP domain H9J99_19735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9J99_19735 PF00512 His Kinase A (phospho-acceptor) domain H9J99_19735 PF16750 Sensor domain of 2-component histidine kinase H9J99_19740 PF00072 Response regulator receiver domain H9J99_19740 PF00486 Transcriptional regulatory protein, C terminal H9J99_19745 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain H9J99_19745 PF00056 lactate/malate dehydrogenase, NAD binding domain H9J99_19750 PF03009 Glycerophosphoryl diester phosphodiesterase family H9J99_19760 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain H9J99_19760 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain H9J99_19765 PF10928 Protein of unknown function (DUF2810) H9J99_19815 PF04013 Putative SAM-dependent RNA methyltransferase H9J99_19820 PF01523 Putative modulator of DNA gyrase H9J99_19825 PF01523 Putative modulator of DNA gyrase H9J99_19830 PF08543 Phosphomethylpyrimidine kinase H9J99_19835 PF00005 ABC transporter H9J99_19840 PF00528 Binding-protein-dependent transport system inner membrane component H9J99_19845 PF09084 NMT1/THI5 like H9J99_19850 PF03070 TENA/THI-4/PQQC family H9J99_19855 PF02110 Hydroxyethylthiazole kinase family H9J99_19860 PF02581 Thiamine monophosphate synthase H9J99_19870 PF00384 Molybdopterin oxidoreductase H9J99_19870 PF18364 Molybdopterin oxidoreductase N-terminal domain H9J99_19870 PF01568 Molydopterin dinucleotide binding domain H9J99_19875 PF03264 NapC/NirT cytochrome c family, N-terminal region H9J99_19900 PF00583 Acetyltransferase (GNAT) family H9J99_19920 PF00392 Bacterial regulatory proteins, gntR family H9J99_19920 PF00155 Aminotransferase class I and II H9J99_19925 PF02595 Glycerate kinase family H9J99_19930 PF02447 GntP family permease H9J99_19935 PF05651 Putative sugar diacid recognition H9J99_19935 PF17853 GGDEF-like domain H9J99_19935 PF13556 PucR C-terminal helix-turn-helix domain H9J99_19970 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H9J99_19975 PF01661 Macro domain H9J99_19980 PF01204 Trehalase H9J99_19990 PF12706 Beta-lactamase superfamily domain H9J99_20000 PF07690 Major Facilitator Superfamily H9J99_20005 PF13533 Biotin-lipoyl like H9J99_20010 PF03922 OmpW family H9J99_20015 PF13599 Pentapeptide repeats (9 copies) H9J99_20030 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading H9J99_20030 PF18416 N-acetylglucosamine binding protein domain 2 H9J99_20035 PF01037 Lrp/AsnC ligand binding domain H9J99_20040 PF01810 LysE type translocator H9J99_20045 PF00326 Prolyl oligopeptidase family H9J99_20050 PF08021 Siderophore-interacting FAD-binding domain H9J99_20050 PF04954 Siderophore-interacting protein H9J99_20055 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_20055 PF03466 LysR substrate binding domain H9J99_20060 PF00797 N-acetyltransferase H9J99_20065 PF00107 Zinc-binding dehydrogenase H9J99_20065 PF08240 Alcohol dehydrogenase GroES-like domain H9J99_20070 PF00756 Putative esterase H9J99_20080 PF17152 Periplasmic sensor domain H9J99_20080 PF00990 Diguanylate cyclase, GGDEF domain H9J99_20095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_20095 PF03466 LysR substrate binding domain H9J99_20110 PF00849 RNA pseudouridylate synthase H9J99_20115 PF01554 MatE H9J99_20120 PF00563 EAL domain H9J99_20120 PF00990 Diguanylate cyclase, GGDEF domain H9J99_20130 PF06865 Pyrimidine/purine nucleoside phosphorylase H9J99_20140 PF00704 Glycosyl hydrolases family 18 H9J99_20140 PF08329 Chitinase A, N-terminal domain H9J99_20160 PF03600 Citrate transporter H9J99_20170 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 H9J99_20180 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain H9J99_20180 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain H9J99_20185 PF06029 AlkA N-terminal domain H9J99_20185 PF00730 HhH-GPD superfamily base excision DNA repair protein H9J99_20195 PF07681 DoxX H9J99_20200 PF02678 Pirin H9J99_20200 PF17954 Quercetinase C-terminal cupin domain H9J99_20205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_20205 PF03466 LysR substrate binding domain H9J99_20220 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase H9J99_20230 PF03616 Sodium/glutamate symporter H9J99_20235 PF00392 Bacterial regulatory proteins, gntR family H9J99_20235 PF00155 Aminotransferase class I and II H9J99_20240 PF00005 ABC transporter H9J99_20250 PF03616 Sodium/glutamate symporter H9J99_20255 PF00132 Bacterial transferase hexapeptide (six repeats) H9J99_20270 PF00672 HAMP domain H9J99_20270 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9J99_20270 PF17200 Single Cache domain 2 H9J99_20275 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD H9J99_20285 PF00072 Response regulator receiver domain H9J99_20285 PF04397 LytTr DNA-binding domain H9J99_20290 PF13492 GAF domain H9J99_20290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9J99_20290 PF06580 Histidine kinase H9J99_20290 PF07694 5TMR of 5TMR-LYT H9J99_20310 PF00005 ABC transporter H9J99_20320 PF01098 Cell cycle protein H9J99_20325 PF01709 Transcriptional regulator H9J99_20335 PF00512 His Kinase A (phospho-acceptor) domain H9J99_20335 PF01627 Hpt domain H9J99_20335 PF17149 Periplasmic sensor domain found in signal transduction proteins H9J99_20335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9J99_20335 PF00672 HAMP domain H9J99_20335 PF00072 Response regulator receiver domain H9J99_20355 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9J99_20355 PF00005 ABC transporter H9J99_20360 PF00005 ABC transporter H9J99_20360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9J99_20375 PF18607 ParA helix turn helix domain H9J99_20375 PF13614 AAA domain H9J99_20385 PF05127 Helicase H9J99_20385 PF13718 GNAT acetyltransferase 2 H9J99_20395 PF00132 Bacterial transferase hexapeptide (six repeats) H9J99_20405 PF03575 Peptidase family S51 H9J99_20410 PF00267 Gram-negative porin H9J99_20415 PF00367 phosphotransferase system, EIIB H9J99_20415 PF02378 Phosphotransferase system, EIIC H9J99_20420 PF01380 SIS domain H9J99_20425 PF01380 SIS domain H9J99_20425 PF01418 Helix-turn-helix domain, rpiR family H9J99_20430 PF00246 Zinc carboxypeptidase H9J99_20435 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9J99_20440 PF03358 NADPH-dependent FMN reductase H9J99_20450 PF00664 ABC transporter transmembrane region H9J99_20450 PF03412 Peptidase C39 family H9J99_20450 PF00005 ABC transporter H9J99_20465 PF00529 HlyD membrane-fusion protein of T1SS H9J99_20470 PF02954 Bacterial regulatory protein, Fis family H9J99_20470 PF00158 Sigma-54 interaction domain H9J99_20470 PF00072 Response regulator receiver domain H9J99_20475 PF02743 Cache domain H9J99_20475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9J99_20475 PF00512 His Kinase A (phospho-acceptor) domain H9J99_20485 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region H9J99_20485 PF01243 Pyridoxamine 5'-phosphate oxidase H9J99_20495 PF12833 Helix-turn-helix domain H9J99_20500 PF18327 Proline utilization A proline dehydrogenase N-terminal domain H9J99_20500 PF14850 DNA-binding domain of Proline dehydrogenase H9J99_20500 PF00171 Aldehyde dehydrogenase family H9J99_20500 PF01619 Proline dehydrogenase H9J99_20510 PF00474 Sodium:solute symporter family H9J99_20545 PF01037 Lrp/AsnC ligand binding domain H9J99_20580 PF10688 Bacterial inner membrane protein H9J99_20585 PF01081 KDPG and KHG aldolase H9J99_20590 PF00294 pfkB family carbohydrate kinase H9J99_20595 PF02614 Glucuronate isomerase H9J99_20600 PF01232 Mannitol dehydrogenase Rossmann domain H9J99_20600 PF08125 Mannitol dehydrogenase C-terminal domain H9J99_20605 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component H9J99_20610 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component H9J99_20615 PF03480 Bacterial extracellular solute-binding protein, family 7 H9J99_20620 PF07729 FCD domain H9J99_20620 PF00392 Bacterial regulatory proteins, gntR family H9J99_20625 PF03786 D-mannonate dehydratase (UxuA) H9J99_20630 PF00270 DEAD/DEAH box helicase H9J99_20630 PF00271 Helicase conserved C-terminal domain H9J99_20635 PF03473 MOSC domain H9J99_20635 PF03475 3-alpha domain H9J99_20650 PF11975 Family 4 glycosyl hydrolase C-terminal domain H9J99_20650 PF02056 Family 4 glycosyl hydrolase H9J99_20655 PF03466 LysR substrate binding domain H9J99_20655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_20660 PF00672 HAMP domain H9J99_20660 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9J99_20660 PF02743 Cache domain H9J99_20670 PF08281 Sigma-70, region 4 H9J99_20670 PF04542 Sigma-70 region 2 H9J99_20675 PF01965 DJ-1/PfpI family H9J99_20675 PF12833 Helix-turn-helix domain H9J99_20680 PF03466 LysR substrate binding domain H9J99_20680 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_20695 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9J99_20695 PF13192 Thioredoxin domain H9J99_20700 PF10417 C-terminal domain of 1-Cys peroxiredoxin H9J99_20700 PF00578 AhpC/TSA family H9J99_20705 PF01047 MarR family H9J99_20710 PF02566 OsmC-like protein H9J99_20725 PF02311 AraC-like ligand binding domain H9J99_20725 PF12833 Helix-turn-helix domain H9J99_20735 PF02610 L-arabinose isomerase H9J99_20735 PF11762 L-arabinose isomerase C-terminal domain H9J99_20740 PF00596 Class II Aldolase and Adducin N-terminal domain H9J99_20750 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family H9J99_20755 PF00005 ABC transporter H9J99_20760 PF02653 Branched-chain amino acid transport system / permease component H9J99_20765 PF01136 Peptidase family U32 H9J99_20775 PF00367 phosphotransferase system, EIIB H9J99_20775 PF02378 Phosphotransferase system, EIIC H9J99_20780 PF00486 Transcriptional regulatory protein, C terminal H9J99_20780 PF00072 Response regulator receiver domain H9J99_20785 PF00512 His Kinase A (phospho-acceptor) domain H9J99_20785 PF08521 Two-component sensor kinase N-terminal H9J99_20785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9J99_20790 PF01547 Bacterial extracellular solute-binding protein H9J99_20795 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain H9J99_20795 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain H9J99_20800 PF04183 IucA / IucC family H9J99_20800 PF06276 Ferric iron reductase FhuF-like transporter H9J99_20810 PF04183 IucA / IucC family H9J99_20810 PF06276 Ferric iron reductase FhuF-like transporter H9J99_20815 PF02655 ATP-grasp domain H9J99_20815 PF00206 Lyase H9J99_20820 PF07715 TonB-dependent Receptor Plug Domain H9J99_20820 PF00593 TonB dependent receptor H9J99_20825 PF07715 TonB-dependent Receptor Plug Domain H9J99_20825 PF07660 Secretin and TonB N terminus short domain H9J99_20825 PF00593 TonB dependent receptor H9J99_20830 PF01497 Periplasmic binding protein H9J99_20835 PF01032 FecCD transport family H9J99_20840 PF01032 FecCD transport family H9J99_20845 PF00005 ABC transporter H9J99_20850 PF00672 HAMP domain H9J99_20850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9J99_20850 PF17200 Single Cache domain 2 H9J99_20855 PF05193 Peptidase M16 inactive domain H9J99_20855 PF00675 Insulinase (Peptidase family M16) H9J99_20865 PF01551 Peptidase family M23 H9J99_20865 PF04225 Opacity-associated protein A LysM-like domain H9J99_20875 PF07690 Major Facilitator Superfamily H9J99_20885 PF00128 Alpha amylase, catalytic domain H9J99_20885 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) H9J99_20890 PF02264 LamB porin H9J99_20905 PF02903 Alpha amylase, N-terminal ig-like domain H9J99_20905 PF16657 Maltogenic Amylase, C-terminal domain H9J99_20905 PF00128 Alpha amylase, catalytic domain H9J99_20910 PF04231 Endonuclease I H9J99_20915 PF17967 Pullulanase N2 domain H9J99_20915 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) H9J99_20915 PF11852 Domain of unknown function (DUF3372) H9J99_20915 PF03714 Bacterial pullanase-associated domain H9J99_20915 PF18494 Pullulanase Ins domain H9J99_20940 PF13693 Winged helix-turn-helix DNA-binding H9J99_21040 PF08765 Mor transcription activator family H9J99_21070 PF08461 Ribonuclease R winged-helix domain H9J99_21075 PF11985 Protein of unknown function (DUF3486) H9J99_21080 PF03237 Terminase-like family H9J99_21085 PF06074 Protein of unknown function (DUF935) H9J99_21105 PF10123 Mu-like prophage I protein H9J99_21115 PF10124 Mu-like prophage major head subunit gpT H9J99_21120 PF17891 Mu-like prophage FluMu N-terminal domain H9J99_21120 PF12949 HeH/LEM domain H9J99_21125 PF07030 Protein of unknown function (DUF1320) H9J99_21195 PF13520 Amino acid permease H9J99_21205 PF08543 Phosphomethylpyrimidine kinase H9J99_21215 PF00375 Sodium:dicarboxylate symporter family H9J99_21220 PF03193 RsgA GTPase H9J99_21225 PF00367 phosphotransferase system, EIIB H9J99_21225 PF02378 Phosphotransferase system, EIIC H9J99_21235 PF02630 SCO1/SenC H9J99_21250 PF00196 Bacterial regulatory proteins, luxR family H9J99_21250 PF17874 MalT-like TPR region H9J99_21255 PF00343 Carbohydrate phosphorylase H9J99_21260 PF02446 4-alpha-glucanotransferase H9J99_21265 PF00128 Alpha amylase, catalytic domain H9J99_21265 PF02806 Alpha amylase, C-terminal all-beta domain H9J99_21265 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) H9J99_21270 PF00912 Transglycosylase H9J99_21275 PF00128 Alpha amylase, catalytic domain H9J99_21290 PF07670 Nucleoside recognition H9J99_21295 PF07670 Nucleoside recognition H9J99_21300 PF01546 Peptidase family M20/M25/M40 H9J99_21300 PF07687 Peptidase dimerisation domain H9J99_21305 PF06803 Protein of unknown function (DUF1232) H9J99_21310 PF00375 Sodium:dicarboxylate symporter family H9J99_21340 PF03466 LysR substrate binding domain H9J99_21340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_21345 PF08803 Putative mono-oxygenase ydhR H9J99_21360 PF00881 Nitroreductase family H9J99_21365 PF01914 MarC family integral membrane protein H9J99_21370 PF01734 Patatin-like phospholipase H9J99_21375 PF18416 N-acetylglucosamine binding protein domain 2 H9J99_21375 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading H9J99_21380 PF13542 Helix-turn-helix domain of transposase family ISL3 H9J99_21380 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H9J99_21380 PF01610 Transposase H9J99_21385 PF17773 UPF0176 acylphosphatase like domain H9J99_21385 PF00581 Rhodanese-like domain H9J99_21395 PF00561 alpha/beta hydrolase fold H9J99_21400 PF00768 D-alanyl-D-alanine carboxypeptidase H9J99_21400 PF07943 Penicillin-binding protein 5, C-terminal domain H9J99_21405 PF00128 Alpha amylase, catalytic domain H9J99_21405 PF00686 Starch binding domain H9J99_21410 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term H9J99_21410 PF12833 Helix-turn-helix domain H9J99_21415 PF00881 Nitroreductase family H9J99_21425 PF03466 LysR substrate binding domain H9J99_21425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_21430 PF09905 DNA-binding protein VF530 H9J99_21440 PF00175 Oxidoreductase NAD-binding domain H9J99_21440 PF00970 Oxidoreductase FAD-binding domain H9J99_21450 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) H9J99_21455 PF01594 AI-2E family transporter H9J99_21465 PF13533 Biotin-lipoyl like H9J99_21485 PF00892 EamA-like transporter family H9J99_21490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_21490 PF03466 LysR substrate binding domain H9J99_21495 PF07690 Major Facilitator Superfamily H9J99_21505 PF00583 Acetyltransferase (GNAT) family H9J99_21515 PF00923 Transaldolase/Fructose-6-phosphate aldolase H9J99_21520 PF04055 Radical SAM superfamily H9J99_21525 PF02901 Pyruvate formate lyase-like H9J99_21525 PF01228 Glycine radical H9J99_21545 PF08000 Bacterial PH domain H9J99_21555 PF13677 Membrane MotB of proton-channel complex MotA/MotB H9J99_21555 PF00691 OmpA family H9J99_21560 PF01618 MotA/TolQ/ExbB proton channel family H9J99_21565 PF04545 Sigma-70, region 4 H9J99_21565 PF04542 Sigma-70 region 2 H9J99_21570 PF03748 Flagellar basal body-associated protein FliL H9J99_21585 PF02561 Flagellar protein FliS H9J99_21590 PF07195 Flagellar hook-associated protein 2 C-terminus H9J99_21590 PF02465 Flagellar hook-associated protein 2 N-terminus H9J99_21590 PF07196 Flagellin hook IN motif H9J99_21610 PF00669 Bacterial flagellin N-terminal helical region H9J99_21610 PF00700 Bacterial flagellin C-terminal helical region H9J99_21620 PF00771 FHIPEP family H9J99_21625 PF01312 FlhB HrpN YscU SpaS Family H9J99_21630 PF01311 Bacterial export proteins, family 1 H9J99_21635 PF01313 Bacterial export proteins, family 3 H9J99_21640 PF00813 FliP family H9J99_21645 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term H9J99_21670 PF00158 Sigma-54 interaction domain H9J99_21670 PF00072 Response regulator receiver domain H9J99_21670 PF02954 Bacterial regulatory protein, Fis family H9J99_21675 PF02049 Flagellar hook-basal body complex protein FliE H9J99_21680 PF08345 Flagellar M-ring protein C-terminal H9J99_21680 PF01514 Secretory protein of YscJ/FliF family H9J99_21685 PF14842 FliG N-terminal domain H9J99_21685 PF14841 FliG middle domain H9J99_21685 PF01706 FliG C-terminal domain H9J99_21695 PF18269 T3SS EscN ATPase C-terminal domain H9J99_21695 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain H9J99_21710 PF03466 LysR substrate binding domain H9J99_21710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_21745 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H9J99_21750 PF03466 LysR substrate binding domain H9J99_21750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_21770 PF00486 Transcriptional regulatory protein, C terminal H9J99_21770 PF00072 Response regulator receiver domain H9J99_21775 PF00072 Response regulator receiver domain H9J99_21775 PF00512 His Kinase A (phospho-acceptor) domain H9J99_21775 PF13426 PAS domain H9J99_21775 PF08448 PAS fold H9J99_21775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9J99_21780 PF00080 Copper/zinc superoxide dismutase (SODC) H9J99_21785 PF00266 Aminotransferase class-V H9J99_21790 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9J99_21795 PF00563 EAL domain H9J99_21795 PF00990 Diguanylate cyclase, GGDEF domain H9J99_21795 PF03707 Bacterial signalling protein N terminal repeat H9J99_21800 PF00155 Aminotransferase class I and II H9J99_21805 PF08240 Alcohol dehydrogenase GroES-like domain H9J99_21805 PF00107 Zinc-binding dehydrogenase H9J99_21835 PF00194 Eukaryotic-type carbonic anhydrase H9J99_21840 PF00924 Mechanosensitive ion channel H9J99_21850 PF01070 FMN-dependent dehydrogenase H9J99_21855 PF02652 L-lactate permease H9J99_21860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_21860 PF03466 LysR substrate binding domain H9J99_21865 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain H9J99_21865 PF00326 Prolyl oligopeptidase family H9J99_21870 PF08352 Oligopeptide/dipeptide transporter, C-terminal region H9J99_21870 PF00005 ABC transporter H9J99_21880 PF13654 AAA domain H9J99_21880 PF05362 Lon protease (S16) C-terminal proteolytic domain H9J99_21885 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9J99_21885 PF00672 HAMP domain H9J99_21890 PF07238 PilZ domain H9J99_21890 PF12945 Flagellar protein YcgR H9J99_21905 PF00583 Acetyltransferase (GNAT) family H9J99_21910 PF12838 4Fe-4S dicluster domain H9J99_21910 PF12800 4Fe-4S binding domain H9J99_21915 PF12801 4Fe-4S binding domain H9J99_21915 PF13237 4Fe-4S dicluster domain H9J99_21930 PF00005 ABC transporter H9J99_21930 PF12558 ATP-binding cassette cobalt transporter H9J99_21935 PF07155 ECF-type riboflavin transporter, S component H9J99_21940 PF00529 HlyD membrane-fusion protein of T1SS H9J99_21940 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9J99_21945 PF11742 Protein of unknown function (DUF3302) H9J99_21950 PF00990 Diguanylate cyclase, GGDEF domain H9J99_21965 PF01048 Phosphorylase superfamily H9J99_21970 PF08349 Protein of unknown function (DUF1722) H9J99_21975 PF13411 MerR HTH family regulatory protein H9J99_21980 PF03441 FAD binding domain of DNA photolyase H9J99_21980 PF00875 DNA photolyase H9J99_21985 PF01476 LysM domain H9J99_21985 PF17969 L,D-transpeptidase C-terminal domain H9J99_21985 PF03734 L,D-transpeptidase catalytic domain H9J99_21995 PF00270 DEAD/DEAH box helicase H9J99_21995 PF00271 Helicase conserved C-terminal domain H9J99_22000 PF00326 Prolyl oligopeptidase family H9J99_22000 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain H9J99_22005 PF00593 TonB dependent receptor H9J99_22005 PF07715 TonB-dependent Receptor Plug Domain H9J99_22025 PF00672 HAMP domain H9J99_22025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9J99_22030 PF12849 PBP superfamily domain H9J99_22035 PF00528 Binding-protein-dependent transport system inner membrane component H9J99_22040 PF00528 Binding-protein-dependent transport system inner membrane component H9J99_22045 PF00005 ABC transporter H9J99_22065 PF13519 von Willebrand factor type A domain H9J99_22075 PF01882 Protein of unknown function DUF58 H9J99_22080 PF17863 AAA lid domain H9J99_22080 PF07726 ATPase family associated with various cellular activities (AAA) H9J99_22085 PF02743 Cache domain H9J99_22085 PF00672 HAMP domain H9J99_22085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9J99_22095 PF00196 Bacterial regulatory proteins, luxR family H9J99_22100 PF00196 Bacterial regulatory proteins, luxR family H9J99_22110 PF00664 ABC transporter transmembrane region H9J99_22110 PF00005 ABC transporter H9J99_22115 PF00529 HlyD membrane-fusion protein of T1SS H9J99_22130 PF01389 OmpA-like transmembrane domain H9J99_22130 PF00691 OmpA family H9J99_22140 PF01032 FecCD transport family H9J99_22145 PF01497 Periplasmic binding protein H9J99_22150 PF00005 ABC transporter H9J99_22155 PF07715 TonB-dependent Receptor Plug Domain H9J99_22155 PF00593 TonB dependent receptor H9J99_22160 PF00664 ABC transporter transmembrane region H9J99_22160 PF00005 ABC transporter H9J99_22170 PF00072 Response regulator receiver domain H9J99_22170 PF00486 Transcriptional regulatory protein, C terminal H9J99_22175 PF02080 TrkA-C domain H9J99_22175 PF02254 TrkA-N domain H9J99_22180 PF02386 Cation transport protein H9J99_22190 PF00127 Copper binding proteins, plastocyanin/azurin family H9J99_22195 PF13419 Haloacid dehalogenase-like hydrolase H9J99_22205 PF01238 Phosphomannose isomerase type I H9J99_22210 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 H9J99_22210 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit H9J99_22215 PF12833 Helix-turn-helix domain H9J99_22225 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit H9J99_22235 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase H9J99_22235 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase H9J99_22240 PF00199 Catalase H9J99_22240 PF06628 Catalase-related immune-responsive H9J99_22245 PF13417 Glutathione S-transferase, N-terminal domain H9J99_22250 PF00107 Zinc-binding dehydrogenase H9J99_22250 PF16884 N-terminal domain of oxidoreductase H9J99_22255 PF00440 Bacterial regulatory proteins, tetR family H9J99_22255 PF16925 Tetracyclin repressor-like, C-terminal domain H9J99_22260 PF04266 ASCH domain H9J99_22290 PF13439 Glycosyltransferase Family 4 H9J99_22290 PF00534 Glycosyl transferases group 1 H9J99_22315 PF02397 Bacterial sugar transferase H9J99_22320 PF00005 ABC transporter H9J99_22320 PF08402 TOBE domain H9J99_22325 PF01547 Bacterial extracellular solute-binding protein H9J99_22330 PF14785 Maltose transport system permease protein MalF P2 domain H9J99_22330 PF00528 Binding-protein-dependent transport system inner membrane component H9J99_22335 PF00528 Binding-protein-dependent transport system inner membrane component H9J99_22365 PF05661 Protein of unknown function (DUF808) H9J99_22370 PF01979 Amidohydrolase family H9J99_22375 PF01679 Proteolipid membrane potential modulator H9J99_22380 PF00111 2Fe-2S iron-sulfur cluster binding domain H9J99_22380 PF03473 MOSC domain H9J99_22380 PF03476 MOSC N-terminal beta barrel domain H9J99_22380 PF00111 2Fe-2S iron-sulfur cluster binding domain H9J99_22380 PF03473 MOSC domain H9J99_22380 PF03476 MOSC N-terminal beta barrel domain H9J99_22385 PF02540 NAD synthase H9J99_22390 PF01467 Cytidylyltransferase-like H9J99_22430 PF00005 ABC transporter H9J99_22435 PF01032 FecCD transport family H9J99_22445 PF02472 Biopolymer transport protein ExbD/TolR H9J99_22450 PF01618 MotA/TolQ/ExbB proton channel family H9J99_22455 PF03544 Gram-negative bacterial TonB protein C-terminal H9J99_22460 PF04055 Radical SAM superfamily H9J99_22465 PF06228 Haem utilisation ChuX/HutX H9J99_22470 PF01243 Pyridoxamine 5'-phosphate oxidase H9J99_22480 PF00072 Response regulator receiver domain H9J99_22480 PF01584 CheW-like domain H9J99_22500 PF00082 Subtilase family H9J99_22520 PF00141 Peroxidase H9J99_22525 PF00210 Ferritin-like domain H9J99_22530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_22530 PF03466 LysR substrate binding domain H9J99_22545 PF04151 Bacterial pre-peptidase C-terminal domain H9J99_22545 PF01752 Collagenase H9J99_22545 PF08453 Peptidase family M9 N-terminal H9J99_22555 PF00128 Alpha amylase, catalytic domain H9J99_22570 PF00999 Sodium/hydrogen exchanger family H9J99_22570 PF02254 TrkA-N domain H9J99_22575 PF02525 Flavodoxin-like fold H9J99_22580 PF00582 Universal stress protein family H9J99_22585 PF00005 ABC transporter H9J99_22585 PF16326 ABC transporter C-terminal domain H9J99_22585 PF12848 ABC transporter H9J99_22590 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain H9J99_22590 PF00326 Prolyl oligopeptidase family H9J99_22605 PF13533 Biotin-lipoyl like H9J99_22610 PF00873 AcrB/AcrD/AcrF family H9J99_22615 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) H9J99_22625 PF13302 Acetyltransferase (GNAT) domain H9J99_22635 PF00990 Diguanylate cyclase, GGDEF domain H9J99_22655 PF00873 AcrB/AcrD/AcrF family H9J99_22675 PF01568 Molydopterin dinucleotide binding domain H9J99_22675 PF00384 Molybdopterin oxidoreductase H9J99_22675 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H9J99_22675 PF12838 4Fe-4S dicluster domain H9J99_22675 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region H9J99_22695 PF00005 ABC transporter H9J99_22705 PF00672 HAMP domain H9J99_22705 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9J99_22710 PF10282 Lactonase, 7-bladed beta-propeller H9J99_22715 PF02567 Phenazine biosynthesis-like protein H9J99_22720 PF01161 Phosphatidylethanolamine-binding protein H9J99_22730 PF01758 Sodium Bile acid symporter family H9J99_22745 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 H9J99_22750 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit H9J99_22750 PF02378 Phosphotransferase system, EIIC H9J99_22755 PF08240 Alcohol dehydrogenase GroES-like domain H9J99_22755 PF00107 Zinc-binding dehydrogenase H9J99_22790 PF03222 Tryptophan/tyrosine permease family H9J99_22800 PF14490 Helix-hairpin-helix containing domain H9J99_22800 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain H9J99_22800 PF13538 UvrD-like helicase C-terminal domain H9J99_22825 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9J99_22825 PF02743 Cache domain H9J99_22825 PF00672 HAMP domain H9J99_22830 PF07670 Nucleoside recognition H9J99_22850 PF01551 Peptidase family M23 H9J99_22850 PF08525 Opacity-associated protein A N-terminal motif H9J99_22850 PF01476 LysM domain H9J99_22870 PF03466 LysR substrate binding domain H9J99_22870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_22875 PF07690 Major Facilitator Superfamily H9J99_22885 PF00462 Glutaredoxin H9J99_22890 PF00892 EamA-like transporter family H9J99_22895 PF00267 Gram-negative porin H9J99_22905 PF01557 Fumarylacetoacetate (FAA) hydrolase family H9J99_22920 PF12833 Helix-turn-helix domain H9J99_22940 PF06426 Serine acetyltransferase, N-terminal H9J99_22940 PF00132 Bacterial transferase hexapeptide (six repeats) H9J99_22945 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II H9J99_22945 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain H9J99_22945 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III H9J99_22945 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I H9J99_22950 PF02790 Cytochrome C oxidase subunit II, transmembrane domain H9J99_22950 PF00116 Cytochrome C oxidase subunit II, periplasmic domain H9J99_22960 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 H9J99_22965 PF00510 Cytochrome c oxidase subunit III H9J99_22985 PF02628 Cytochrome oxidase assembly protein H9J99_22990 PF01040 UbiA prenyltransferase family H9J99_22995 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase H9J99_22995 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase H9J99_23025 PF00313 'Cold-shock' DNA-binding domain H9J99_23030 PF03889 Alternative ribosome-rescue factor A H9J99_23035 PF13426 PAS domain H9J99_23035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9J99_23035 PF08447 PAS fold H9J99_23040 PF00990 Diguanylate cyclase, GGDEF domain H9J99_23055 PF12704 MacB-like periplasmic core domain H9J99_23055 PF02687 FtsX-like permease family H9J99_23055 PF00005 ABC transporter H9J99_23060 PF02687 FtsX-like permease family H9J99_23060 PF12704 MacB-like periplasmic core domain H9J99_23060 PF00005 ABC transporter H9J99_23070 PF00672 HAMP domain H9J99_23070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9J99_23070 PF17200 Single Cache domain 2 H9J99_23075 PF00210 Ferritin-like domain H9J99_23085 PF07995 Glucose / Sorbosone dehydrogenase H9J99_23090 PF00465 Iron-containing alcohol dehydrogenase H9J99_23105 PF00892 EamA-like transporter family H9J99_23120 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_23120 PF03466 LysR substrate binding domain H9J99_23130 PF13193 AMP-binding enzyme C-terminal domain H9J99_23130 PF00501 AMP-binding enzyme H9J99_23135 PF00351 Biopterin-dependent aromatic amino acid hydroxylase H9J99_23140 PF01329 Pterin 4 alpha carbinolamine dehydratase H9J99_23160 PF12843 Putative quorum-sensing-regulated virulence factor H9J99_23165 PF00271 Helicase conserved C-terminal domain H9J99_23165 PF00270 DEAD/DEAH box helicase H9J99_23170 PF09905 DNA-binding protein VF530 H9J99_23175 PF00291 Pyridoxal-phosphate dependent enzyme H9J99_23185 PF01470 Pyroglutamyl peptidase H9J99_23195 PF02492 CobW/HypB/UreG, nucleotide-binding domain H9J99_23195 PF07683 Cobalamin synthesis protein cobW C-terminal domain H9J99_23200 PF00271 Helicase conserved C-terminal domain H9J99_23200 PF00270 DEAD/DEAH box helicase H9J99_23220 PF12792 CSS motif domain associated with EAL H9J99_23220 PF00563 EAL domain H9J99_23225 PF00005 ABC transporter H9J99_23240 PF03466 LysR substrate binding domain H9J99_23240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_23245 PF00884 Sulfatase H9J99_23250 PF04055 Radical SAM superfamily H9J99_23250 PF13186 Iron-sulfur cluster-binding domain H9J99_23255 PF03466 LysR substrate binding domain H9J99_23255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_23275 PF00589 Phage integrase family H9J99_23275 PF14659 Phage integrase, N-terminal SAM-like domain H9J99_23325 PF01575 MaoC like domain H9J99_23330 PF12849 PBP superfamily domain H9J99_23340 PF12833 Helix-turn-helix domain H9J99_23345 PF08206 Ribonuclease B OB domain H9J99_23345 PF00773 RNB domain H9J99_23345 PF00575 S1 RNA binding domain H9J99_23350 PF00271 Helicase conserved C-terminal domain H9J99_23350 PF03880 DbpA RNA binding domain H9J99_23350 PF00270 DEAD/DEAH box helicase H9J99_23355 PF00563 EAL domain H9J99_23355 PF00990 Diguanylate cyclase, GGDEF domain H9J99_23355 PF13426 PAS domain H9J99_23360 PF00871 Acetokinase family H9J99_23365 PF13426 PAS domain H9J99_23365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9J99_23365 PF08447 PAS fold H9J99_23375 PF10063 Uncharacterized integral membrane protein (DUF2301) H9J99_23380 PF00682 HMGL-like H9J99_23385 PF00378 Enoyl-CoA hydratase/isomerase H9J99_23390 PF01039 Carboxyl transferase domain H9J99_23395 PF02770 Acyl-CoA dehydrogenase, middle domain H9J99_23395 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H9J99_23395 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H9J99_23400 PF09278 MerR, DNA binding H9J99_23400 PF00376 MerR family regulatory protein H9J99_23405 PF02803 Thiolase, C-terminal domain H9J99_23405 PF00108 Thiolase, N-terminal domain H9J99_23410 PF00171 Aldehyde dehydrogenase family H9J99_23415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain H9J99_23415 PF02770 Acyl-CoA dehydrogenase, middle domain H9J99_23415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain H9J99_23420 PF00378 Enoyl-CoA hydratase/isomerase H9J99_23425 PF00378 Enoyl-CoA hydratase/isomerase H9J99_23440 PF00116 Cytochrome C oxidase subunit II, periplasmic domain H9J99_23440 PF06481 COX Aromatic Rich Motif H9J99_23445 PF00115 Cytochrome C and Quinol oxidase polypeptide I H9J99_23450 PF00510 Cytochrome c oxidase subunit III H9J99_23460 PF01040 UbiA prenyltransferase family H9J99_23475 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H9J99_23480 PF08031 Berberine and berberine like H9J99_23480 PF01565 FAD binding domain H9J99_23485 PF00005 ABC transporter H9J99_23490 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9J99_23495 PF00528 Binding-protein-dependent transport system inner membrane component H9J99_23500 PF00528 Binding-protein-dependent transport system inner membrane component H9J99_23510 PF03466 LysR substrate binding domain H9J99_23510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_23515 PF00043 Glutathione S-transferase, C-terminal domain H9J99_23515 PF02798 Glutathione S-transferase, N-terminal domain H9J99_23525 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) H9J99_23525 PF00364 Biotin-requiring enzyme H9J99_23525 PF02817 e3 binding domain H9J99_23530 PF02779 Transketolase, pyrimidine binding domain H9J99_23530 PF02780 Transketolase, C-terminal domain H9J99_23535 PF00676 Dehydrogenase E1 component H9J99_23550 PF00012 Hsp70 protein H9J99_23555 PF04314 Copper chaperone PCu(A)C H9J99_23580 PF00072 Response regulator receiver domain H9J99_23580 PF00486 Transcriptional regulatory protein, C terminal H9J99_23595 PF00245 Alkaline phosphatase H9J99_23605 PF01483 Proprotein convertase P-domain H9J99_23605 PF00082 Subtilase family H9J99_23615 PF00990 Diguanylate cyclase, GGDEF domain H9J99_23615 PF00072 Response regulator receiver domain H9J99_23620 PF03222 Tryptophan/tyrosine permease family H9J99_23625 PF00583 Acetyltransferase (GNAT) family H9J99_23630 PF00384 Molybdopterin oxidoreductase H9J99_23630 PF04879 Molybdopterin oxidoreductase Fe4S4 domain H9J99_23630 PF01568 Molydopterin dinucleotide binding domain H9J99_23635 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases H9J99_23635 PF14824 Sirohaem biosynthesis protein central H9J99_23635 PF10414 Sirohaem synthase dimerisation region H9J99_23640 PF02885 Glycosyl transferase family, helical bundle domain H9J99_23640 PF00591 Glycosyl transferase family, a/b domain H9J99_23645 PF01738 Dienelactone hydrolase family H9J99_23650 PF03861 ANTAR domain H9J99_23650 PF08376 Nitrate and nitrite sensing H9J99_23655 PF00005 ABC transporter H9J99_23660 PF00528 Binding-protein-dependent transport system inner membrane component H9J99_23665 PF00005 ABC transporter H9J99_23670 PF01077 Nitrite and sulphite reductase 4Fe-4S domain H9J99_23670 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain H9J99_23670 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9J99_23670 PF13806 Rieske-like [2Fe-2S] domain H9J99_23670 PF18267 Rubredoxin NAD+ reductase C-terminal domain H9J99_23670 PF04324 BFD-like [2Fe-2S] binding domain H9J99_23685 PF08361 MAATS-type transcriptional repressor, C-terminal region H9J99_23685 PF00440 Bacterial regulatory proteins, tetR family H9J99_23700 PF00211 Adenylate and Guanylate cyclase catalytic domain H9J99_23700 PF00072 Response regulator receiver domain H9J99_23720 PF03793 PASTA domain H9J99_23720 PF00069 Protein kinase domain H9J99_23735 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE H9J99_23740 PF13677 Membrane MotB of proton-channel complex MotA/MotB H9J99_23740 PF00691 OmpA family H9J99_23745 PF06761 Intracellular multiplication and human macrophage-killing H9J99_23745 PF06744 Type VI secretion protein IcmF C-terminal H9J99_23745 PF14331 ImcF-related N-terminal domain H9J99_23765 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 H9J99_23770 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath H9J99_23775 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath H9J99_23790 PF05947 Type VI secretion system, TssF H9J99_23800 PF07724 AAA domain (Cdc48 subfamily) H9J99_23800 PF17871 AAA lid domain H9J99_23800 PF10431 C-terminal, D2-small domain, of ClpB protein H9J99_23800 PF00004 ATPase family associated with various cellular activities (AAA) H9J99_23810 PF06715 Gp5 C-terminal repeat (3 copies) H9J99_23810 PF04717 Type VI secretion system, phage-baseplate injector H9J99_23825 PF00149 Calcineurin-like phosphoesterase H9J99_23825 PF12320 Type 5 capsule protein repressor C-terminal domain H9J99_23830 PF13476 AAA domain H9J99_23850 PF08212 Lipocalin-like domain H9J99_23860 PF07690 Major Facilitator Superfamily H9J99_23870 PF03606 C4-dicarboxylate anaerobic carrier H9J99_23875 PF00034 Cytochrome c H9J99_23880 PF01212 Beta-eliminating lyase H9J99_23890 PF07728 AAA domain (dynein-related subfamily) H9J99_23890 PF17868 AAA lid domain H9J99_23890 PF12592 Protein of unknown function (DUF3763) H9J99_23895 PF05762 VWA domain containing CoxE-like protein H9J99_23910 PF03466 LysR substrate binding domain H9J99_23910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_23915 PF01565 FAD binding domain H9J99_23915 PF09330 D-lactate dehydrogenase, membrane binding H9J99_23930 PF00842 Alanine racemase, C-terminal domain H9J99_23930 PF01168 Alanine racemase, N-terminal domain H9J99_23935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9J99_23935 PF00672 HAMP domain H9J99_23985 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9J99_24005 PF09154 Domain of unknown function (DUF1939) H9J99_24005 PF00128 Alpha amylase, catalytic domain H9J99_24025 PF13462 Thioredoxin H9J99_24025 PF06965 Na+/H+ antiporter 1 H9J99_24060 PF01272 Transcription elongation factor, GreA/GreB, C-term H9J99_24060 PF14760 Rnk N-terminus H9J99_24065 PF04324 BFD-like [2Fe-2S] binding domain H9J99_24065 PF01077 Nitrite and sulphite reductase 4Fe-4S domain H9J99_24065 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain H9J99_24065 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9J99_24065 PF18267 Rubredoxin NAD+ reductase C-terminal domain H9J99_24070 PF13806 Rieske-like [2Fe-2S] domain H9J99_24075 PF01226 Formate/nitrite transporter H9J99_24095 PF03605 Anaerobic c4-dicarboxylate membrane transporter H9J99_24105 PF00593 TonB dependent receptor H9J99_24105 PF07715 TonB-dependent Receptor Plug Domain H9J99_24120 PF11756 Nitrous oxide-stimulated promoter H9J99_24125 PF01554 MatE H9J99_24135 PF07690 Major Facilitator Superfamily H9J99_24140 PF00085 Thioredoxin H9J99_24145 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III H9J99_24145 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal H9J99_24165 PF01238 Phosphomannose isomerase type I H9J99_24170 PF07690 Major Facilitator Superfamily H9J99_24175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9J99_24175 PF07730 Histidine kinase H9J99_24175 PF05231 MASE1 H9J99_24180 PF00072 Response regulator receiver domain H9J99_24180 PF00196 Bacterial regulatory proteins, luxR family H9J99_24185 PF07690 Major Facilitator Superfamily H9J99_24190 PF02634 FdhD/NarQ family H9J99_24195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_24195 PF03466 LysR substrate binding domain H9J99_24200 PF00384 Molybdopterin oxidoreductase H9J99_24205 PF07992 Pyridine nucleotide-disulphide oxidoreductase H9J99_24205 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain H9J99_24220 PF04143 Sulphur transport H9J99_24230 PF00873 AcrB/AcrD/AcrF family H9J99_24235 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion H9J99_24245 PF13597 Anaerobic ribonucleoside-triphosphate reductase H9J99_24245 PF03477 ATP cone domain H9J99_24255 PF01554 MatE H9J99_24260 PF12833 Helix-turn-helix domain H9J99_24265 PF00155 Aminotransferase class I and II H9J99_24270 PF18030 RimK PreATP-grasp domain H9J99_24270 PF08443 RimK-like ATP-grasp domain H9J99_24280 PF04076 Bacterial OB fold (BOF) protein H9J99_24285 PF07685 CobB/CobQ-like glutamine amidotransferase domain H9J99_24295 PF00528 Binding-protein-dependent transport system inner membrane component H9J99_24300 PF03459 TOBE domain H9J99_24300 PF00005 ABC transporter H9J99_24310 PF00360 Phytochrome region H9J99_24310 PF00990 Diguanylate cyclase, GGDEF domain H9J99_24310 PF01590 GAF domain H9J99_24310 PF00563 EAL domain H9J99_24320 PF00990 Diguanylate cyclase, GGDEF domain H9J99_24335 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch H9J99_24335 PF01262 Alanine dehydrogenase/PNT, C-terminal domain H9J99_24335 PF05222 Alanine dehydrogenase/PNT, N-terminal domain H9J99_24340 PF02233 NAD(P) transhydrogenase beta subunit H9J99_24355 PF00072 Response regulator receiver domain H9J99_24355 PF00486 Transcriptional regulatory protein, C terminal H9J99_24370 PF03701 Uncharacterised protein family (UPF0181) H9J99_24375 PF00582 Universal stress protein family H9J99_24385 PF14690 zinc-finger of transposase IS204/IS1001/IS1096/IS1165 H9J99_24385 PF13542 Helix-turn-helix domain of transposase family ISL3 H9J99_24385 PF01610 Transposase H9J99_24390 PF01253 Translation initiation factor SUI1 H9J99_24400 PF01820 D-ala D-ala ligase N-terminus H9J99_24400 PF07478 D-ala D-ala ligase C-terminus H9J99_24410 PF00583 Acetyltransferase (GNAT) family H9J99_24410 PF13380 CoA binding domain H9J99_24410 PF13607 Succinyl-CoA ligase like flavodoxin domain H9J99_24415 PF03466 LysR substrate binding domain H9J99_24415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_24420 PF07715 TonB-dependent Receptor Plug Domain H9J99_24420 PF00593 TonB dependent receptor H9J99_24425 PF16363 GDP-mannose 4,6 dehydratase H9J99_24430 PF08448 PAS fold H9J99_24430 PF08447 PAS fold H9J99_24430 PF05231 MASE1 H9J99_24430 PF00990 Diguanylate cyclase, GGDEF domain H9J99_24430 PF13426 PAS domain H9J99_24430 PF00563 EAL domain H9J99_24435 PF03746 LamB/YcsF family H9J99_24440 PF02682 Carboxyltransferase domain, subdomain C and D H9J99_24445 PF02626 Carboxyltransferase domain, subdomain A and B H9J99_24460 PF00005 ABC transporter H9J99_24465 PF13472 GDSL-like Lipase/Acylhydrolase family H9J99_24470 PF12241 Trans-2-enoyl-CoA reductase catalytic region H9J99_24470 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase H9J99_24470 PF07055 Enoyl reductase FAD binding domain H9J99_24475 PF13188 PAS domain H9J99_24475 PF00990 Diguanylate cyclase, GGDEF domain H9J99_24475 PF03707 Bacterial signalling protein N terminal repeat H9J99_24475 PF00563 EAL domain H9J99_24485 PF01556 DnaJ C terminal domain H9J99_24485 PF00684 DnaJ central domain H9J99_24485 PF00226 DnaJ domain H9J99_24510 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle H9J99_24510 PF12793 Sugar transport-related sRNA regulator N-term H9J99_24520 PF03061 Thioesterase superfamily H9J99_24535 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) H9J99_24540 PF12262 Bacterial virulence factor lipase N-terminal H9J99_24545 PF00665 Integrase core domain H9J99_24545 PF13333 Integrase core domain H9J99_24545 PF13276 HTH-like domain H9J99_24560 PF03741 Integral membrane protein TerC family H9J99_24565 PF00149 Calcineurin-like phosphoesterase H9J99_24565 PF02872 5'-nucleotidase, C-terminal domain H9J99_24570 PF11398 Protein of unknown function (DUF2813) H9J99_24575 PF06496 Protein of unknown function (DUF1097) H9J99_24580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_24580 PF03466 LysR substrate binding domain H9J99_24585 PF01226 Formate/nitrite transporter H9J99_24590 PF04264 YceI-like domain H9J99_24595 PF01292 Prokaryotic cytochrome b561 H9J99_24610 PF12792 CSS motif domain associated with EAL H9J99_24610 PF00563 EAL domain H9J99_24615 PF00271 Helicase conserved C-terminal domain H9J99_24615 PF00270 DEAD/DEAH box helicase H9J99_24620 PF04336 Acyl carrier protein phosphodiesterase H9J99_24625 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9J99_24630 PF13419 Haloacid dehalogenase-like hydrolase H9J99_24715 PF11799 impB/mucB/samB family C-terminal domain H9J99_24715 PF00817 impB/mucB/samB family H9J99_24715 PF13438 Domain of unknown function (DUF4113) H9J99_24720 PF00717 Peptidase S24-like H9J99_24740 PF02954 Bacterial regulatory protein, Fis family H9J99_24810 PF01797 Transposase IS200 like H9J99_24840 PF00294 pfkB family carbohydrate kinase H9J99_24845 PF01268 Formate--tetrahydrofolate ligase H9J99_24850 PF00483 Nucleotidyl transferase H9J99_24855 PF00704 Glycosyl hydrolases family 18 H9J99_24855 PF06483 Chitinase C H9J99_24860 PF06719 AraC-type transcriptional regulator N-terminus H9J99_24860 PF12833 Helix-turn-helix domain H9J99_24865 PF00465 Iron-containing alcohol dehydrogenase H9J99_24875 PF14532 Sigma-54 interaction domain H9J99_24875 PF00072 Response regulator receiver domain H9J99_24875 PF02954 Bacterial regulatory protein, Fis family H9J99_24880 PF00672 HAMP domain H9J99_24880 PF00512 His Kinase A (phospho-acceptor) domain H9J99_24880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9J99_24890 PF07690 Major Facilitator Superfamily H9J99_24895 PF00224 Pyruvate kinase, barrel domain H9J99_24895 PF02887 Pyruvate kinase, alpha/beta domain H9J99_24900 PF00005 ABC transporter H9J99_24905 PF00528 Binding-protein-dependent transport system inner membrane component H9J99_24910 PF00497 Bacterial extracellular solute-binding proteins, family 3 H9J99_24915 PF00528 Binding-protein-dependent transport system inner membrane component H9J99_24920 PF00563 EAL domain H9J99_24920 PF01590 GAF domain H9J99_24920 PF00990 Diguanylate cyclase, GGDEF domain H9J99_24920 PF00989 PAS fold H9J99_24935 PF00356 Bacterial regulatory proteins, lacI family H9J99_24935 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family H9J99_24940 PF00381 PTS HPr component phosphorylation site H9J99_24940 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 H9J99_24945 PF00294 pfkB family carbohydrate kinase H9J99_24950 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit H9J99_24950 PF02378 Phosphotransferase system, EIIC H9J99_24960 PF00873 AcrB/AcrD/AcrF family H9J99_24980 PF01571 Aminomethyltransferase folate-binding domain H9J99_24980 PF08669 Glycine cleavage T-protein C-terminal barrel domain H9J99_24990 PF00464 Serine hydroxymethyltransferase H9J99_24995 PF01597 Glycine cleavage H-protein H9J99_25000 PF02347 Glycine cleavage system P-protein H9J99_25005 PF00158 Sigma-54 interaction domain H9J99_25005 PF02954 Bacterial regulatory protein, Fis family H9J99_25005 PF00072 Response regulator receiver domain H9J99_25025 PF00313 'Cold-shock' DNA-binding domain H9J99_25055 PF01039 Carboxyl transferase domain H9J99_25055 PF17848 Acetyl-coA carboxylase zinc finger domain H9J99_25060 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family H9J99_25060 PF03466 LysR substrate binding domain H9J99_25065 PF11490 DNA polymerase III polC-type N-terminus II H9J99_25065 PF07733 Bacterial DNA polymerase III alpha NTPase domain H9J99_25065 PF17657 Bacterial DNA polymerase III alpha subunit finger domain H9J99_25065 PF02811 PHP domain H9J99_25065 PF14579 Helix-hairpin-helix motif H9J99_25065 PF00929 Exonuclease H9J99_25070 PF00664 ABC transporter transmembrane region H9J99_25070 PF00005 ABC transporter H9J99_25090 PF02253 Phospholipase A1 H9J99_25100 PF09278 MerR, DNA binding H9J99_25100 PF00376 MerR family regulatory protein H9J99_25105 PF01327 Polypeptide deformylase H9J99_25125 PF00571 CBS domain H9J99_25125 PF03448 MgtE intracellular N domain H9J99_25125 PF01769 Divalent cation transporter H9J99_25145 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily H9J99_25150 PF00724 NADH:flavin oxidoreductase / NADH oxidase family H9J99_25160 PF01757 Acyltransferase family H9J99_25170 PF09722 Protein of unknown function (DUF2384) H9J99_25175 PF00141 Peroxidase H9J99_25180 PF13187 4Fe-4S dicluster domain H9J99_25180 PF01645 Conserved region in glutamate synthase H9J99_25190 PF00072 Response regulator receiver domain H9J99_25190 PF12431 Transcriptional regulator H9J99_25195 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain H9J99_25195 PF17203 Single cache domain 3 H9J99_25195 PF00989 PAS fold H9J99_25195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9J99_25200 PF00939 Sodium:sulfate symporter transmembrane region H9J99_25205 PF00171 Aldehyde dehydrogenase family H9J99_25225 PF00892 EamA-like transporter family H9J99_25230 PF00893 Small Multidrug Resistance protein H9J99_25235 PF07504 Fungalysin/Thermolysin Propeptide Motif H9J99_25235 PF04151 Bacterial pre-peptidase C-terminal domain H9J99_25235 PF02868 Thermolysin metallopeptidase, alpha-helical domain H9J99_25235 PF01447 Thermolysin metallopeptidase, catalytic domain H9J99_25235 PF03413 Peptidase propeptide and YPEB domain H9J99_25245 PF01569 PAP2 superfamily H9J99_25255 PF00892 EamA-like transporter family H9J99_25270 PF01584 CheW-like domain H9J99_25270 PF00072 Response regulator receiver domain H9J99_25290 PF00196 Bacterial regulatory proteins, luxR family H9J99_25290 PF00072 Response regulator receiver domain H9J99_25300 PF00990 Diguanylate cyclase, GGDEF domain H9J99_25305 PF00072 Response regulator receiver domain H9J99_25305 PF00196 Bacterial regulatory proteins, luxR family H9J99_25315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase H9J99_25315 PF00512 His Kinase A (phospho-acceptor) domain H9J99_25315 PF09456 RcsC Alpha-Beta-Loop (ABL) H9J99_25315 PF00072 Response regulator receiver domain H9J99_25330 PF00691 OmpA family H9J99_25330 PF05736 OprF membrane domain H9J99_25360 PF11999 Protein of unknown function (DUF3494) H9J99_25360 PF02368 Bacterial Ig-like domain (group 2) H9J99_25395 PF08447 PAS fold H9J99_25395 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9J99_25405 PF17200 Single Cache domain 2 H9J99_25405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain H9J99_25405 PF00672 HAMP domain H9J99_25415 PF02796 Helix-turn-helix domain of resolvase H9J99_25415 PF00239 Resolvase, N terminal domain H9J99_25480 PF08401 Domain of unknown function (DUF1738) H9J99_25480 PF18818 Metallopeptidase superfamily domain H9J99_25480 PF13362 Toprim domain H9J99_25490 PF03230 Antirestriction protein H9J99_25515 PF01131 DNA topoisomerase H9J99_25515 PF01751 Toprim domain H9J99_25575 PF01464 Transglycosylase SLT domain H9J99_25590 PF01848 Hok/gef family H9J99_25630 PF00437 Type II/IV secretion system protein H9J99_25660 PF03743 Bacterial conjugation TrbI-like protein H9J99_25675 PF04335 VirB8 protein H9J99_25685 PF00437 Type II/IV secretion system protein H9J99_25695 PF03135 CagE, TrbE, VirB family, component of type IV transporter system H9J99_25705 PF04956 TrbC/VIRB2 family H9J99_25770 PF01751 Toprim domain H9J99_25770 PF01131 DNA topoisomerase H9J99_26040 PF00437 Type II/IV secretion system protein H9J99_26145 PF02899 Phage integrase, N-terminal SAM-like domain H9J99_26145 PF00589 Phage integrase family H9J99_26230 PF00145 C-5 cytosine-specific DNA methylase H9J99_26245 PF13614 AAA domain H9J99_26250 PF17762 HTH domain found in ParB protein H9J99_26250 PF02195 ParB-like nuclease domain