locus-tag	class	description
pD_gene0011	PF01367	5'-3' exonuclease, C-terminal SAM fold
pD_gene0011	PF02739	5'-3' exonuclease, N-terminal resolvase-like domain
pD_gene0011	PF00476	DNA polymerase family A
pD_gene0011	PF01612	3'-5' exonuclease
pD_gene0014	PF01227	GTP cyclohydrolase I
pD_gene0015	PF01242	6-pyruvoyl tetrahydropterin synthase
pD_gene0016	PF06508	Queuosine biosynthesis protein QueC
pD_gene0017	PF04055	Radical SAM superfamily
pD_gene0022	PF00271	Helicase conserved C-terminal domain
pD_gene0022	PF04851	Type III restriction enzyme, res subunit
pD_gene0029	PF07724	AAA domain (Cdc48 subfamily)
pD_gene0029	PF10431	C-terminal, D2-small domain, of ClpB protein 
pD_gene0029	PF06689	ClpX C4-type zinc finger
pD_gene0062	PF07963	Prokaryotic N-terminal methylation motif
pD_gene0062	PF00114	Pilin (bacterial filament)
pD_gene0064	PF01510	N-acetylmuramoyl-L-alanine amidase