locus_tag old_locus_tag gene Name start end strand product note type ID NCBI 41418 41489 + tRNA-Cys anticodon:ACA tRNA rna1 http://www.ncbi.nlm.nih.gov/gene/?term= 41339 41410 + tRNA-Met anticodon:CAT tRNA rna0 http://www.ncbi.nlm.nih.gov/gene/?term= NVP1122A_01 NVP1122A_01 NVP1122A_01 1 656 + terminase small subunit NVP1122A_01%3B tara_best_match:OM-RGC.v1.016045857~cvp_best_match:RF_PEP_197085631~InterPro:IPR005335%3B kegg:none|pfam:PF03592|pog:POG0796 gene gene0 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_01 NVP1122A_02 NVP1122A_02 NVP1122A_02 643 2364 + terminase-like family protein NVP1122A_02%3B aclame_best_match:protein:proph:166228~tara_best_match:OM-RGC.v1.001228255~cvp_best_match:CAMPEP_0000020542~InterPro:IPR004921~VirFam ID:Large subunit terminase (TermL)%3B pfam:PF03237|cog:COG5410|egg:COG5410|pog:POG0042 gene gene1 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_02 NVP1122A_03 NVP1122A_03 NVP1122A_03 2404 3951 + portal protein NVP1122A_03%3B tara_best_match:OM-RGC.v1.001991723~InterPro:IPR024459~VirFam ID:Portal protein (Portal) gene gene2 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_03 NVP1122A_04 NVP1122A_04 NVP1122A_04 3932 4909 + head morphogenesis domain protein NVP1122A_04%3B tara_best_match:OM-RGC.v1.005419194~cvp_best_match:RF_PEP_423262381~InterPro:IPR006528 gene gene3 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_04 NVP1122A_05 NVP1122A_05 NVP1122A_05 5038 5280 + hypothetical protein NVP1122A_05 gene gene4 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_05 NVP1122A_06 NVP1122A_06 NVP1122A_06 5289 7274 + coil containing protein NVP1122A_06 gene gene5 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_06 NVP1122A_07 NVP1122A_07 NVP1122A_07 7285 7737 + hypothetical protein NVP1122A_07%3B tara_best_match:OM-RGC.v1.024839066 gene gene6 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_07 NVP1122A_08 NVP1122A_08 NVP1122A_08 7740 8852 + major capsid protein NVP1122A_08%3B tara_best_match:OM-RGC.v1.004765993~VirFam ID:Major capsid protein (MCP)%3B Major capsid protein (MCP) gene gene7 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_08 NVP1122A_09 NVP1122A_09 NVP1122A_09 8864 9199 + hypothetical protein NVP1122A_09 gene gene8 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_09 NVP1122A_10 NVP1122A_10 NVP1122A_10 9298 9960 + hypothetical protein NVP1122A_10 gene gene9 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_10 NVP1122A_11 NVP1122A_11 NVP1122A_11 9962 10177 + hypothetical protein NVP1122A_11 gene gene10 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_11 NVP1122A_12 NVP1122A_12 NVP1122A_12 10295 10675 + hypothetical protein NVP1122A_12 gene gene11 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_12 NVP1122A_13 NVP1122A_13 NVP1122A_13 10678 11979 + hypothetical protein NVP1122A_13 gene gene12 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_13 NVP1122A_14 NVP1122A_14 NVP1122A_14 11976 13739 + hypothetical protein NVP1122A_14 gene gene13 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_14 NVP1122A_15 NVP1122A_15 NVP1122A_15 13883 14557 + hypothetical protein NVP1122A_15%3B aclame_best_match:protein:vir:96801~tara_best_match:OM-RGC.v1.012685103~cvp_best_match:CAMPEP_0000012440%3B pog:POG0184 gene gene14 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_15 NVP1122A_16 NVP1122A_16 NVP1122A_16 14585 14989 + head completion adaptor NVP1122A_16%3B VirFam ID:Head completion adaptor (Ad1)%3B head completion adaptor (Ad1) gene gene15 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_16 NVP1122A_17 NVP1122A_17 NVP1122A_17 14986 15348 + head-closure protein NVP1122A_17%3B VirFam ID:Head-closure (Hc1)%3B head-closure (Hc1) gene gene16 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_17 NVP1122A_18 NVP1122A_18 NVP1122A_18 15352 15765 + neck protein NVP1122A_18%3B tara_best_match:OM-RGC.v1.026973291~VirFam ID:Neck protein (Ne)%3B Neck protein (Ne) gene gene17 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_18 NVP1122A_19 NVP1122A_19 NVP1122A_19 15762 16196 + tail-completion protein NVP1122A_19%3B VirFam ID:Tail-completion (Tc1)%3B tail-completion (Tc1) gene gene18 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_19 NVP1122A_20 NVP1122A_20 NVP1122A_20 16253 16762 + major tail protein NVP1122A_20%3B VirFam ID:Major tail protein (MTP)%3B Major tail protein (MTP) gene gene19 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_20 NVP1122A_21 NVP1122A_21 NVP1122A_21 16774 17133 + hypothetical protein NVP1122A_21 gene gene20 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_21 NVP1122A_22 NVP1122A_22 NVP1122A_22 17130 17729 + hypothetical protein NVP1122A_22 gene gene21 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_22 NVP1122A_23 NVP1122A_23 NVP1122A_23 17726 19819 + coil containing protein NVP1122A_23 gene gene22 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_23 NVP1122A_24 NVP1122A_24 NVP1122A_24 19819 20292 + hypothetical protein NVP1122A_24 gene gene23 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_24 NVP1122A_25 NVP1122A_25 NVP1122A_25 20355 20894 + protein of unknown function DUF1833 NVP1122A_25%3B InterPro:IPR014974 gene gene24 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_25 NVP1122A_26 NVP1122A_26 NVP1122A_26 20891 21307 + NlpC/P60 family protein NVP1122A_26%3B tara_best_match:OM-RGC.v1.026312462~cvp_best_match:CAMPEP_0000012472%3B pfam:PF00877 gene gene25 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_26 NVP1122A_27 NVP1122A_27 NVP1122A_27 21285 23855 + coil containing protein NVP1122A_27 gene gene26 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_27 NVP1122A_28 NVP1122A_28 NVP1122A_28 23855 26167 + pectin lyase fold/virulence factor NVP1122A_28%3B InterPro:IPR011050 gene gene27 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_28 NVP1122A_29 NVP1122A_29 NVP1122A_29 26227 26535 - hypothetical protein NVP1122A_29 gene gene28 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_29 NVP1122A_30 NVP1122A_30 NVP1122A_30 26681 27196 - single-stranded DNA-binding protein NVP1122A_30%3B aclame_best_match:protein:plasmid:133420~tara_best_match:OM-RGC.v1.018675131~cvp_best_match:CAMPEP_0000016380~InterPro:IPR011344%3B kegg:none|cog:COG0629|egg:COG0629|pog:POG0226 gene gene29 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_30 NVP1122A_31 NVP1122A_31 NVP1122A_31 27196 27831 - single-strand annealing protein NVP1122A_31%3B aclame_best_match:protein:vir:902~tara_best_match:OM-RGC.v1.015086857~cvp_best_match:NCBI_PEP_3282307~InterPro:IPR009425%3B single-strand annealing protein SAK3%3B pfam:PF06378|pog:POG0906 gene gene30 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_31 NVP1122A_32 NVP1122A_32 NVP1122A_32 28131 28319 + hypothetical protein NVP1122A_32 gene gene31 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_32 NVP1122A_33 NVP1122A_33 NVP1122A_33 28323 28502 + hypothetical protein NVP1122A_33%3B tara_best_match:OM-RGC.v1.036647497 gene gene32 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_33 NVP1122A_34 NVP1122A_34 NVP1122A_34 28495 28770 + hypothetical protein NVP1122A_34 gene gene33 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_34 NVP1122A_35 NVP1122A_35 NVP1122A_35 28795 29055 + hypothetical protein NVP1122A_35 gene gene34 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_35 NVP1122A_36 NVP1122A_36 NVP1122A_36 29070 29300 + hypothetical protein NVP1122A_36 gene gene35 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_36 NVP1122A_37 NVP1122A_37 NVP1122A_37 29290 29517 + protein of unknown function DUF551 NVP1122A_37%3B InterPro:IPR007539 gene gene36 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_37 NVP1122A_38 NVP1122A_38 NVP1122A_38 29517 29999 + hypothetical protein NVP1122A_38 gene gene37 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_38 NVP1122A_39 NVP1122A_39 NVP1122A_39 29999 30307 + protein of unknown function DUF1364 NVP1122A_39%3B aclame_best_match:protein:vir:105608~tara_best_match:OM-RGC.v1.030522789~cvp_best_match:RF_PEP_56692951~InterPro:IPR010774%3B pfam:PF07102|pog:POG0618 gene gene38 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_39 NVP1122A_40 NVP1122A_40 NVP1122A_40 30304 30582 + tRNA endonuclease-like domain protein NVP1122A_40%3B tara_best_match:OM-RGC.v1.031141498~InterPro:IPR011856 gene gene39 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_40 NVP1122A_41 NVP1122A_41 NVP1122A_41 30579 30980 + hypothetical protein NVP1122A_41 gene gene40 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_41 NVP1122A_42 NVP1122A_42 NVP1122A_42 30984 31241 + hypothetical protein NVP1122A_42%3B aclame_best_match:protein:proph:165868~cvp_best_match:RF_PEP_448244902%3B egg:ENOG41122AZ gene gene41 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_42 NVP1122A_43 NVP1122A_43 NVP1122A_43 31358 32002 + KilA NVP1122A_43%3B tara_best_match:OM-RGC.v1.016061693~InterPro:IPR018004%3B KilA%2C N-terminal/APSES-type HTH%2C DNA-binding gene gene42 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_43 NVP1122A_44 NVP1122A_44 NVP1122A_44 32105 32458 + ASCH domain protein NVP1122A_44%3B tara_best_match:OM-RGC.v1.007701456~InterPro:IPR015947%3B pfam:PF04266|egg:ENOG411245K gene gene43 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_44 NVP1122A_45 NVP1122A_45 NVP1122A_45 32473 32673 + hypothetical protein NVP1122A_45%3B tara_best_match:OM-RGC.v1.035943074 gene gene44 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_45 NVP1122A_46 NVP1122A_46 NVP1122A_46 32675 33184 + coil containing protein NVP1122A_46 gene gene45 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_46 NVP1122A_47 NVP1122A_47 NVP1122A_47 33795 35096 + C-5 cytosine-specific DNA methylase NVP1122A_47%3B tara_best_match:OM-RGC.v1.004201265~InterPro:IPR018117%3B pfam:PF00145 gene gene46 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_47 NVP1122A_48 NVP1122A_48 NVP1122A_48 35086 35373 + coil containing protein NVP1122A_48%3B tara_best_match:OM-RGC.v1.034531381 gene gene47 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_48 NVP1122A_49 NVP1122A_49 NVP1122A_49 35324 35731 + hypothetical protein NVP1122A_49%3B tara_best_match:OM-RGC.v1.005938743%3B egg:ENOG4112BZ9 gene gene48 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_49 NVP1122A_50 NVP1122A_50 NVP1122A_50 35796 36074 + hypothetical protein NVP1122A_50%3B tara_best_match:OM-RGC.v1.032407151~cvp_best_match:RF_PEP_422937539 gene gene49 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_50 NVP1122A_51 NVP1122A_51 NVP1122A_51 36074 36232 + hypothetical protein NVP1122A_51 gene gene50 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_51 NVP1122A_52 NVP1122A_52 NVP1122A_52 36235 36684 + protein of unknown function DUF1367 NVP1122A_52%3B aclame_best_match:protein:proph:163709~tara_best_match:OM-RGC.v1.024963271~cvp_best_match:RF_PEP_160700636~InterPro:IPR009797%3B pog:POG2339 gene gene51 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_52 NVP1122A_53 NVP1122A_53 NVP1122A_53 36696 37235 + DNA N-6-adenine-methyltransferase NVP1122A_53%3B aclame_best_match:protein:vir:79615~tara_best_match:OM-RGC.v1.019621919~cvp_best_match:RF_PEP_327198618~InterPro:IPR008593%3B DNA N-6-adenine-methyltransferase (Dam)%3B pfam:PF05869|pog:POG0822 gene gene52 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_53 NVP1122A_54 NVP1122A_54 NVP1122A_54 37343 37720 - holin NVP1122A_54%3B tara_best_match:OM-RGC.v1.027618775~InterPro:IPR021497%3B holin of 3TMs%2C for gene-transfer release%3B pfam:PF11351 gene gene53 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_54 NVP1122A_55 NVP1122A_55 NVP1122A_55 37720 38103 - coil containing protein NVP1122A_55%3B tara_best_match:OM-RGC.v1.026953781~cvp_best_match:CAMPEP_0000011658%3B egg:ENOG4111WYZ gene gene54 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_55 NVP1122A_56 NVP1122A_56 NVP1122A_56 38238 39407 + histidine kinase-like ATPase NVP1122A_56%3B InterPro:IPR003594 gene gene55 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_56 NVP1122A_57 NVP1122A_57 NVP1122A_57 39415 39588 + hypothetical protein NVP1122A_57 gene gene56 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_57 NVP1122A_58 NVP1122A_58 NVP1122A_58 39699 40067 + TMhelix containing protein NVP1122A_58 gene gene57 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_58 NVP1122A_59 NVP1122A_59 NVP1122A_59 40095 40430 + hypothetical protein NVP1122A_59 gene gene58 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_59 NVP1122A_60 NVP1122A_60 NVP1122A_60 40418 40858 + winged helix-turn-helix DNA-binding domain protein NVP1122A_60%3B InterPro:IPR011991 gene gene59 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_60 NVP1122A_61 NVP1122A_61 NVP1122A_61 40875 41168 + carbon storage regulator NVP1122A_61%3B InterPro:IPR003751 gene gene60 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_61 NVP1122A_62 NVP1122A_62 NVP1122A_62 41659 41838 + TMhelix containing protein NVP1122A_62%3B tara_best_match:OM-RGC.v1.032830840 gene gene61 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_62 NVP1122A_63 NVP1122A_63 NVP1122A_63 41838 42008 + hypothetical protein NVP1122A_63%3B tara_best_match:OM-RGC.v1.036844510 gene gene62 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_63 NVP1122A_64 NVP1122A_64 NVP1122A_64 42227 42535 + hypothetical protein NVP1122A_64 gene gene63 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_64 NVP1122A_65 NVP1122A_65 NVP1122A_65 42535 42900 + coil containing protein NVP1122A_65 gene gene64 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_65 NVP1122A_66 NVP1122A_66 NVP1122A_66 42950 43165 + hypothetical protein NVP1122A_66 gene gene65 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_66 NVP1122A_67 NVP1122A_67 NVP1122A_67 43156 43389 + hypothetical protein NVP1122A_67 gene gene66 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_67 NVP1122A_68 NVP1122A_68 NVP1122A_68 43394 43999 + peptidase S1 NVP1122A_68%3B tara_best_match:OM-RGC.v1.009887468~cvp_best_match:CAMPEP_0000011380~InterPro:IPR009003 gene gene67 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_68 NVP1122A_69 NVP1122A_69 NVP1122A_69 44013 44429 + hypothetical protein NVP1122A_69%3B aclame_best_match:protein:proph:176699~tara_best_match:OM-RGC.v1.026210620 gene gene68 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122A_69