locus_tag old_locus_tag gene Name start end strand product note type ID NCBI 41340 41411 + tRNA-Met anticodon:CAT tRNA rna0 http://www.ncbi.nlm.nih.gov/gene/?term= 41419 41490 + tRNA-Cys anticodon:ACA tRNA rna1 http://www.ncbi.nlm.nih.gov/gene/?term= NVP1122B_01 NVP1122B_01 NVP1122B_01 1 657 + terminase small subunit NVP1122B_01%3B tara_best_match:OM-RGC.v1.016045857~cvp_best_match:RF_PEP_197085631~InterPro:IPR005335%3B kegg:none|pfam:PF03592|pog:POG0796 gene gene0 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_01 NVP1122B_02 NVP1122B_02 NVP1122B_02 644 2365 + terminase-like family protein NVP1122B_02%3B aclame_best_match:protein:proph:166228~tara_best_match:OM-RGC.v1.001228255~cvp_best_match:CAMPEP_0000020542~InterPro:IPR004921~VirFam ID:Large subunit terminase (TermL)%3B pfam:PF03237|cog:COG5410|egg:COG5410|pog:POG0042 gene gene1 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_02 NVP1122B_03 NVP1122B_03 NVP1122B_03 2405 3952 + portal protein NVP1122B_03%3B tara_best_match:OM-RGC.v1.001991723~InterPro:IPR024459~VirFam ID:Portal protein (Portal) gene gene2 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_03 NVP1122B_04 NVP1122B_04 NVP1122B_04 3933 4910 + head morphogenesis domain protein NVP1122B_04%3B tara_best_match:OM-RGC.v1.005419194~cvp_best_match:RF_PEP_423262381~InterPro:IPR006528 gene gene3 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_04 NVP1122B_05 NVP1122B_05 NVP1122B_05 5039 5281 + hypothetical protein NVP1122B_05 gene gene4 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_05 NVP1122B_06 NVP1122B_06 NVP1122B_06 5290 7275 + coil containing protein NVP1122B_06 gene gene5 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_06 NVP1122B_07 NVP1122B_07 NVP1122B_07 7286 7738 + hypothetical protein NVP1122B_07%3B tara_best_match:OM-RGC.v1.024839066 gene gene6 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_07 NVP1122B_08 NVP1122B_08 NVP1122B_08 7741 8853 + major capsid protein NVP1122B_08%3B tara_best_match:OM-RGC.v1.004765993~VirFam ID:Major capsid protein (MCP)%3B Major capsid protein (MCP) gene gene7 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_08 NVP1122B_09 NVP1122B_09 NVP1122B_09 8865 9200 + hypothetical protein NVP1122B_09 gene gene8 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_09 NVP1122B_10 NVP1122B_10 NVP1122B_10 9299 9961 + hypothetical protein NVP1122B_10 gene gene9 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_10 NVP1122B_11 NVP1122B_11 NVP1122B_11 9963 10178 + hypothetical protein NVP1122B_11 gene gene10 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_11 NVP1122B_12 NVP1122B_12 NVP1122B_12 10296 10676 + hypothetical protein NVP1122B_12 gene gene11 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_12 NVP1122B_13 NVP1122B_13 NVP1122B_13 10679 11980 + hypothetical protein NVP1122B_13 gene gene12 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_13 NVP1122B_14 NVP1122B_14 NVP1122B_14 11977 13740 + hypothetical protein NVP1122B_14 gene gene13 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_14 NVP1122B_15 NVP1122B_15 NVP1122B_15 13884 14558 + hypothetical protein NVP1122B_15%3B aclame_best_match:protein:vir:96801~tara_best_match:OM-RGC.v1.012685103~cvp_best_match:CAMPEP_0000012440%3B pog:POG0184 gene gene14 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_15 NVP1122B_16 NVP1122B_16 NVP1122B_16 14586 14990 + head completion adaptor NVP1122B_16%3B VirFam ID:Head completion adaptor (Ad1)%3B head completion adaptor (Ad1) gene gene15 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_16 NVP1122B_17 NVP1122B_17 NVP1122B_17 14987 15349 + head-closure protein NVP1122B_17%3B VirFam ID:Head-closure (Hc1)%3B head-closure (Hc1) gene gene16 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_17 NVP1122B_18 NVP1122B_18 NVP1122B_18 15353 15766 + neck protein NVP1122B_18%3B tara_best_match:OM-RGC.v1.026973291~VirFam ID:Neck protein (Ne)%3B Neck protein (Ne) gene gene17 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_18 NVP1122B_19 NVP1122B_19 NVP1122B_19 15763 16197 + tail-completion protein NVP1122B_19%3B VirFam ID:Tail-completion (Tc1)%3B tail-completion (Tc1) gene gene18 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_19 NVP1122B_20 NVP1122B_20 NVP1122B_20 16254 16763 + major tail protein NVP1122B_20%3B VirFam ID:Major tail protein (MTP)%3B Major tail protein (MTP) gene gene19 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_20 NVP1122B_21 NVP1122B_21 NVP1122B_21 16775 17134 + hypothetical protein NVP1122B_21 gene gene20 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_21 NVP1122B_22 NVP1122B_22 NVP1122B_22 17131 17730 + hypothetical protein NVP1122B_22 gene gene21 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_22 NVP1122B_23 NVP1122B_23 NVP1122B_23 17727 19820 + coil containing protein NVP1122B_23 gene gene22 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_23 NVP1122B_24 NVP1122B_24 NVP1122B_24 19820 20293 + hypothetical protein NVP1122B_24 gene gene23 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_24 NVP1122B_25 NVP1122B_25 NVP1122B_25 20356 20895 + protein of unknown function DUF1833 NVP1122B_25%3B InterPro:IPR014974 gene gene24 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_25 NVP1122B_26 NVP1122B_26 NVP1122B_26 20892 21308 + NlpC/P60 family protein NVP1122B_26%3B tara_best_match:OM-RGC.v1.026312462~cvp_best_match:CAMPEP_0000012472%3B pfam:PF00877 gene gene25 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_26 NVP1122B_27 NVP1122B_27 NVP1122B_27 21286 23856 + coil containing protein NVP1122B_27 gene gene26 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_27 NVP1122B_28 NVP1122B_28 NVP1122B_28 23856 26168 + pectin lyase fold/virulence factor NVP1122B_28%3B InterPro:IPR011050 gene gene27 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_28 NVP1122B_29 NVP1122B_29 NVP1122B_29 26228 26536 - hypothetical protein NVP1122B_29 gene gene28 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_29 NVP1122B_30 NVP1122B_30 NVP1122B_30 26682 27197 - single-stranded DNA-binding protein NVP1122B_30%3B aclame_best_match:protein:plasmid:133420~tara_best_match:OM-RGC.v1.018675131~cvp_best_match:CAMPEP_0000016380~InterPro:IPR011344%3B kegg:none|cog:COG0629|egg:COG0629|pog:POG0226 gene gene29 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_30 NVP1122B_31 NVP1122B_31 NVP1122B_31 27197 27832 - single-strand annealing protein NVP1122B_31%3B aclame_best_match:protein:vir:902~tara_best_match:OM-RGC.v1.015086857~cvp_best_match:NCBI_PEP_3282307~InterPro:IPR009425%3B single-strand annealing protein SAK3%3B pfam:PF06378|pog:POG0906 gene gene30 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_31 NVP1122B_32 NVP1122B_32 NVP1122B_32 28132 28320 + hypothetical protein NVP1122B_32 gene gene31 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_32 NVP1122B_33 NVP1122B_33 NVP1122B_33 28324 28503 + hypothetical protein NVP1122B_33%3B tara_best_match:OM-RGC.v1.036647497 gene gene32 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_33 NVP1122B_34 NVP1122B_34 NVP1122B_34 28496 28771 + hypothetical protein NVP1122B_34 gene gene33 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_34 NVP1122B_35 NVP1122B_35 NVP1122B_35 28796 29056 + hypothetical protein NVP1122B_35 gene gene34 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_35 NVP1122B_36 NVP1122B_36 NVP1122B_36 29071 29301 + hypothetical protein NVP1122B_36 gene gene35 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_36 NVP1122B_37 NVP1122B_37 NVP1122B_37 29291 29518 + protein of unknown function DUF551 NVP1122B_37%3B InterPro:IPR007539 gene gene36 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_37 NVP1122B_38 NVP1122B_38 NVP1122B_38 29518 30000 + hypothetical protein NVP1122B_38 gene gene37 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_38 NVP1122B_39 NVP1122B_39 NVP1122B_39 30000 30308 + protein of unknown function DUF1364 NVP1122B_39%3B aclame_best_match:protein:vir:105608~tara_best_match:OM-RGC.v1.030522789~cvp_best_match:RF_PEP_56692951~InterPro:IPR010774%3B pfam:PF07102|pog:POG0618 gene gene38 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_39 NVP1122B_40 NVP1122B_40 NVP1122B_40 30305 30583 + tRNA endonuclease-like domain protein NVP1122B_40%3B tara_best_match:OM-RGC.v1.031141498~InterPro:IPR011856 gene gene39 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_40 NVP1122B_41 NVP1122B_41 NVP1122B_41 30580 30981 + hypothetical protein NVP1122B_41 gene gene40 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_41 NVP1122B_42 NVP1122B_42 NVP1122B_42 30985 31242 + hypothetical protein NVP1122B_42%3B aclame_best_match:protein:proph:165868~cvp_best_match:RF_PEP_448244902%3B egg:ENOG41122AZ gene gene41 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_42 NVP1122B_43 NVP1122B_43 NVP1122B_43 31359 32003 + KilA NVP1122B_43%3B tara_best_match:OM-RGC.v1.016061693~InterPro:IPR018004%3B KilA%2C N-terminal/APSES-type HTH%2C DNA-binding gene gene42 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_43 NVP1122B_44 NVP1122B_44 NVP1122B_44 32106 32459 + ASCH domain protein NVP1122B_44%3B tara_best_match:OM-RGC.v1.007701456~InterPro:IPR015947%3B pfam:PF04266|egg:ENOG411245K gene gene43 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_44 NVP1122B_45 NVP1122B_45 NVP1122B_45 32474 32674 + hypothetical protein NVP1122B_45%3B tara_best_match:OM-RGC.v1.035943074 gene gene44 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_45 NVP1122B_46 NVP1122B_46 NVP1122B_46 32676 33185 + coil containing protein NVP1122B_46 gene gene45 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_46 NVP1122B_47 NVP1122B_47 NVP1122B_47 33796 35097 + C-5 cytosine-specific DNA methylase NVP1122B_47%3B tara_best_match:OM-RGC.v1.004201265~InterPro:IPR018117%3B pfam:PF00145 gene gene46 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_47 NVP1122B_48 NVP1122B_48 NVP1122B_48 35087 35374 + coil containing protein NVP1122B_48%3B tara_best_match:OM-RGC.v1.034531381 gene gene47 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_48 NVP1122B_49 NVP1122B_49 NVP1122B_49 35325 35732 + hypothetical protein NVP1122B_49%3B tara_best_match:OM-RGC.v1.005938743%3B egg:ENOG4112BZ9 gene gene48 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_49 NVP1122B_50 NVP1122B_50 NVP1122B_50 35797 36075 + hypothetical protein NVP1122B_50%3B tara_best_match:OM-RGC.v1.032407151~cvp_best_match:RF_PEP_422937539 gene gene49 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_50 NVP1122B_51 NVP1122B_51 NVP1122B_51 36075 36233 + hypothetical protein NVP1122B_51 gene gene50 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_51 NVP1122B_52 NVP1122B_52 NVP1122B_52 36236 36685 + protein of unknown function DUF1367 NVP1122B_52%3B aclame_best_match:protein:proph:163709~tara_best_match:OM-RGC.v1.024963271~cvp_best_match:RF_PEP_160700636~InterPro:IPR009797%3B pog:POG2339 gene gene51 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_52 NVP1122B_53 NVP1122B_53 NVP1122B_53 36697 37236 + DNA N-6-adenine-methyltransferase NVP1122B_53%3B aclame_best_match:protein:vir:79615~tara_best_match:OM-RGC.v1.019621919~cvp_best_match:RF_PEP_327198618~InterPro:IPR008593%3B DNA N-6-adenine-methyltransferase (Dam)%3B pfam:PF05869|pog:POG0822 gene gene52 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_53 NVP1122B_54 NVP1122B_54 NVP1122B_54 37344 37721 - holin NVP1122B_54%3B tara_best_match:OM-RGC.v1.027618775~InterPro:IPR021497%3B holin of 3TMs%2C for gene-transfer release%3B pfam:PF11351 gene gene53 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_54 NVP1122B_55 NVP1122B_55 NVP1122B_55 37721 38104 - coil containing protein NVP1122B_55%3B tara_best_match:OM-RGC.v1.026953781~cvp_best_match:CAMPEP_0000011658%3B egg:ENOG4111WYZ gene gene54 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_55 NVP1122B_56 NVP1122B_56 NVP1122B_56 38239 39408 + histidine kinase-like ATPase NVP1122B_56%3B InterPro:IPR003594 gene gene55 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_56 NVP1122B_57 NVP1122B_57 NVP1122B_57 39416 39589 + hypothetical protein NVP1122B_57 gene gene56 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_57 NVP1122B_58 NVP1122B_58 NVP1122B_58 39700 40068 + TMhelix containing protein NVP1122B_58 gene gene57 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_58 NVP1122B_59 NVP1122B_59 NVP1122B_59 40096 40431 + hypothetical protein NVP1122B_59 gene gene58 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_59 NVP1122B_60 NVP1122B_60 NVP1122B_60 40419 40859 + winged helix-turn-helix DNA-binding domain protein NVP1122B_60%3B InterPro:IPR011991 gene gene59 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_60 NVP1122B_61 NVP1122B_61 NVP1122B_61 40876 41169 + carbon storage regulator NVP1122B_61%3B InterPro:IPR003751 gene gene60 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_61 NVP1122B_62 NVP1122B_62 NVP1122B_62 41660 41839 + TMhelix containing protein NVP1122B_62%3B tara_best_match:OM-RGC.v1.032830840 gene gene61 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_62 NVP1122B_63 NVP1122B_63 NVP1122B_63 41839 42009 + hypothetical protein NVP1122B_63%3B tara_best_match:OM-RGC.v1.036844510 gene gene62 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_63 NVP1122B_64 NVP1122B_64 NVP1122B_64 42228 42536 + hypothetical protein NVP1122B_64 gene gene63 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_64 NVP1122B_65 NVP1122B_65 NVP1122B_65 42536 42901 + coil containing protein NVP1122B_65 gene gene64 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_65 NVP1122B_66 NVP1122B_66 NVP1122B_66 42951 43166 + hypothetical protein NVP1122B_66 gene gene65 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_66 NVP1122B_67 NVP1122B_67 NVP1122B_67 43157 43390 + hypothetical protein NVP1122B_67 gene gene66 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_67 NVP1122B_68 NVP1122B_68 NVP1122B_68 43395 44000 + peptidase S1 NVP1122B_68%3B tara_best_match:OM-RGC.v1.009887468~cvp_best_match:CAMPEP_0000011380~InterPro:IPR009003 gene gene67 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_68 NVP1122B_69 NVP1122B_69 NVP1122B_69 44014 44430 + hypothetical protein NVP1122B_69%3B aclame_best_match:protein:proph:176699~tara_best_match:OM-RGC.v1.026210620 gene gene68 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1122B_69