locus_tag old_locus_tag gene Name start end strand product note type ID NCBI 35399 35470 + tRNA-Arg anticodon:TCT tRNA rna1 http://www.ncbi.nlm.nih.gov/gene/?term= 35323 35394 + tRNA-Trp anticodon:CCA tRNA rna0 http://www.ncbi.nlm.nih.gov/gene/?term= NVP1176O_01 NVP1176O_01 NVP1176O_01 1 378 + terminase small subunit NVP1176O_01%3B tara_best_match:OM-RGC.v1.025937624~cvp_best_match:CAMPEP_0000029016~InterPro:IPR005335%3B pfam:PF03592 gene gene0 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_01 NVP1176O_02 NVP1176O_02 NVP1176O_02 372 1613 + terminase large subunit NVP1176O_02%3B aclame_best_match:protein:vir:99776~tara_best_match:OM-RGC.v1.003069681~cvp_best_match:RF_PEP_397912639~InterPro:IPR006437~VirFam ID:Large subunit terminase (TermL)%3B kegg:none|pfam:PF04466|cog:COG1783|pog:POG0252 gene gene1 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_02 NVP1176O_03 NVP1176O_03 NVP1176O_03 1630 3096 + TMhelix containing protein NVP1176O_03%3B VirFam ID:Portal protein (Portal) gene gene2 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_03 NVP1176O_04 NVP1176O_04 NVP1176O_04 3096 4184 + putative head morphogenesis protein NVP1176O_04%3B aclame_best_match:protein:vir:96767~tara_best_match:OM-RGC.v1.004622281~cvp_best_match:CAMPEP_0000025966~InterPro:IPR017029%3B pog:POG0721 gene gene3 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_04 NVP1176O_05 NVP1176O_05 NVP1176O_05 4303 4980 + coil containing protein NVP1176O_05 gene gene4 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_05 NVP1176O_06 NVP1176O_06 NVP1176O_06 4985 5968 + major capsid protein NVP1176O_06%3B aclame_best_match:protein:proph:180670~tara_best_match:OM-RGC.v1.005889993~cvp_best_match:CAMPEP_0000026760~VirFam ID:Major capsid protein (MCP)%3B Major capsid protein (MCP)%3B egg:COG5492|pog:POG1554 gene gene5 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_06 NVP1176O_07 NVP1176O_07 NVP1176O_07 5979 6164 + hypothetical protein NVP1176O_07%3B tara_best_match:OM-RGC.v1.034460703 gene gene6 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_07 NVP1176O_08 NVP1176O_08 NVP1176O_08 6177 6671 + hypothetical protein NVP1176O_08 gene gene7 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_08 NVP1176O_09 NVP1176O_09 NVP1176O_09 6674 7186 + head completion adaptor NVP1176O_09%3B aclame_best_match:protein:vir:78383~cvp_best_match:NCBI_PEP_282534197~VirFam ID:Head completion adaptor (Ad1)%3B head completion adaptor (Ad1)%3B pog:POG1527 gene gene8 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_09 NVP1176O_10 NVP1176O_10 NVP1176O_10 7188 7370 + hypothetical protein NVP1176O_10 gene gene9 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_10 NVP1176O_11 NVP1176O_11 NVP1176O_11 7370 7729 + head-closure protein NVP1176O_11%3B tara_best_match:OM-RGC.v1.028077836~cvp_best_match:CAMPEP_0000029052~VirFam ID:Head-closure (Hc1)%3B head-closure (Hc1) gene gene10 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_11 NVP1176O_12 NVP1176O_12 NVP1176O_12 7729 8229 + coil containing protein NVP1176O_12%3B tara_best_match:OM-RGC.v1.024307204~cvp_best_match:CAMPEP_0000029092~VirFam ID:Neck protein (Ne) gene gene11 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_12 NVP1176O_13 NVP1176O_13 NVP1176O_13 8229 8645 + hypothetical protein NVP1176O_13%3B tara_best_match:OM-RGC.v1.025810965~cvp_best_match:CAMPEP_0000029042 gene gene12 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_13 NVP1176O_14 NVP1176O_14 NVP1176O_14 8682 9881 + major tail protein NVP1176O_14%3B tara_best_match:OM-RGC.v1.003548523~VirFam ID:Major tail protein (MTP)%3B Major tail protein (MTP) gene gene13 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_14 NVP1176O_15 NVP1176O_15 NVP1176O_15 9878 10258 + hypothetical protein NVP1176O_15 gene gene14 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_15 NVP1176O_16 NVP1176O_16 NVP1176O_16 10279 10554 + hypothetical protein NVP1176O_16 gene gene15 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_16 NVP1176O_17 NVP1176O_17 NVP1176O_17 10547 12643 + coil containing protein NVP1176O_17 gene gene16 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_17 NVP1176O_18 NVP1176O_18 NVP1176O_18 12646 13131 + hypothetical protein NVP1176O_18%3B tara_best_match:OM-RGC.v1.022968936~cvp_best_match:CAMPEP_0000029004 gene gene17 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_18 NVP1176O_19 NVP1176O_19 NVP1176O_19 13122 13646 + hypothetical protein NVP1176O_19%3B tara_best_match:OM-RGC.v1.020331787~cvp_best_match:CAMPEP_0000029094 gene gene18 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_19 NVP1176O_20 NVP1176O_20 NVP1176O_20 13643 13990 + hypothetical protein NVP1176O_20%3B tara_best_match:OM-RGC.v1.029216920~cvp_best_match:CAMPEP_0000029036 gene gene19 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_20 NVP1176O_21 NVP1176O_21 NVP1176O_21 13968 16703 + TMhelix containing protein NVP1176O_21%3B tara_best_match:OM-RGC.v1.000243936~cvp_best_match:CAMPEP_0000029064 gene gene20 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_21 NVP1176O_22 NVP1176O_22 NVP1176O_22 16707 18671 + endosialidase NVP1176O_22%3B InterPro:IPR024429 gene gene21 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_22 NVP1176O_23 NVP1176O_23 NVP1176O_23 18871 19353 - TMhelix containing protein NVP1176O_23%3B tara_best_match:OM-RGC.v1.017501232 gene gene22 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_23 NVP1176O_24 NVP1176O_24 NVP1176O_24 19356 19769 - hypothetical protein NVP1176O_24%3B tara_best_match:OM-RGC.v1.025813690~cvp_best_match:CAMPEP_0000031342%3B egg:ENOG410XY2Q gene gene23 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_24 NVP1176O_25 NVP1176O_25 NVP1176O_25 19772 19978 - hypothetical protein NVP1176O_25 gene gene24 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_25 NVP1176O_26 NVP1176O_26 NVP1176O_26 19978 20157 - hypothetical protein NVP1176O_26 gene gene25 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_26 NVP1176O_27 NVP1176O_27 NVP1176O_27 20569 20787 - TMhelix containing protein NVP1176O_27 gene gene26 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_27 NVP1176O_28 NVP1176O_28 NVP1176O_28 21142 21426 - coil containing protein NVP1176O_28 gene gene27 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_28 NVP1176O_29 NVP1176O_29 NVP1176O_29 21603 21818 - hypothetical protein NVP1176O_29 gene gene28 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_29 NVP1176O_30 NVP1176O_30 NVP1176O_30 21815 22081 - hypothetical protein NVP1176O_30 gene gene29 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_30 NVP1176O_31 NVP1176O_31 NVP1176O_31 22071 22250 - hypothetical protein NVP1176O_31 gene gene30 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_31 NVP1176O_32 NVP1176O_32 NVP1176O_32 22284 22571 - protein of unknown function CP83 NVP1176O_32%3B InterPro:IPR020284 gene gene31 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_32 NVP1176O_33 NVP1176O_33 NVP1176O_33 22607 23059 - primosome PriB/single-strand DNA-binding protein NVP1176O_33%3B aclame_best_match:protein:proph:162187~tara_best_match:OM-RGC.v1.025556922~InterPro:IPR000424%3B kegg:none|cog:COG0629|egg:COG0629 gene gene32 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_33 NVP1176O_34 NVP1176O_34 NVP1176O_34 23061 23696 - essential recombination function protein NVP1176O_34%3B tara_best_match:OM-RGC.v1.022665062~InterPro:IPR007499 gene gene33 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_34 NVP1176O_35 NVP1176O_35 NVP1176O_35 23693 23827 - hypothetical protein NVP1176O_35 gene gene34 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_35 NVP1176O_36 NVP1176O_36 NVP1176O_36 23971 24138 + hypothetical protein NVP1176O_36 gene gene35 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_36 NVP1176O_37 NVP1176O_37 NVP1176O_37 24154 24732 + hypothetical protein NVP1176O_37%3B tara_best_match:OM-RGC.v1.023989711%3B egg:ENOG410XUCJ gene gene36 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_37 NVP1176O_38 NVP1176O_38 NVP1176O_38 24729 24902 + TMhelix containing protein NVP1176O_38 gene gene37 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_38 NVP1176O_39 NVP1176O_39 NVP1176O_39 24872 25057 + hypothetical protein NVP1176O_39 gene gene38 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_39 NVP1176O_40 NVP1176O_40 NVP1176O_40 25044 25385 + YopX protein NVP1176O_40%3B cvp_best_match:RF_PEP_13487822~InterPro:IPR019096 gene gene39 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_40 NVP1176O_41 NVP1176O_41 NVP1176O_41 25389 25586 + membrane lipoprotein NVP1176O_41%3B Prokaryotic membrane lipoprotein lipid attachment site profile gene gene40 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_41 NVP1176O_42 NVP1176O_42 NVP1176O_42 25561 25731 + hypothetical protein NVP1176O_42 gene gene41 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_42 NVP1176O_43 NVP1176O_43 NVP1176O_43 25740 25919 + hypothetical protein NVP1176O_43 gene gene42 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_43 NVP1176O_44 NVP1176O_44 NVP1176O_44 26018 26278 + hypothetical protein NVP1176O_44 gene gene43 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_44 NVP1176O_45 NVP1176O_45 NVP1176O_45 26323 26517 + hypothetical protein NVP1176O_45 gene gene44 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_45 NVP1176O_46 NVP1176O_46 NVP1176O_46 26670 27113 + hypothetical protein NVP1176O_46 gene gene45 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_46 NVP1176O_47 NVP1176O_47 NVP1176O_47 27164 27868 + hypothetical protein NVP1176O_47%3B tara_best_match:OM-RGC.v1.011154543~cvp_best_match:RF_PEP_460042921 gene gene46 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_47 NVP1176O_48 NVP1176O_48 NVP1176O_48 27869 29215 + coil containing protein NVP1176O_48%3B aclame_best_match:protein:proph:166195~tara_best_match:OM-RGC.v1.001996651~cvp_best_match:RF_PEP_399498841%3B kegg:none|cog:COG0305|egg:COG0305|pog:POG0025 gene gene47 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_48 NVP1176O_49 NVP1176O_49 NVP1176O_49 29226 29405 + hypothetical protein NVP1176O_49 gene gene48 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_49 NVP1176O_50 NVP1176O_50 NVP1176O_50 29452 29844 + coil containing protein NVP1176O_50%3B aclame_best_match:protein:proph:170864~tara_best_match:OM-RGC.v1.029362766 gene gene49 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_50 NVP1176O_51 NVP1176O_51 NVP1176O_51 29857 30138 + recombination enhancement RecA-dependent nuclease NVP1176O_51%3B aclame_best_match:protein:vir:93650~tara_best_match:OM-RGC.v1.031080544~cvp_best_match:RF_PEP_38640327~InterPro:IPR031875%3B recombination enhancement%2C RecA-dependent nuclease%3B pfam:PF16786 gene gene50 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_51 NVP1176O_52 NVP1176O_52 NVP1176O_52 30215 30721 + HNH nuclease NVP1176O_52%3B aclame_best_match:protein:vir:97107~tara_best_match:OM-RGC.v1.020601338~cvp_best_match:RF_PEP_84662624~InterPro:IPR003615%3B pog:POG0184 gene gene51 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_52 NVP1176O_53 NVP1176O_53 NVP1176O_53 30721 31080 + endodeoxyribonuclease NVP1176O_53%3B aclame_best_match:protein:proph:184903~tara_best_match:OM-RGC.v1.028124456~cvp_best_match:RF_PEP_428782708~InterPro:IPR008822%3B endodeoxyribonuclease RusA%3B kegg:none|pfam:PF05866|cog:COG4570|egg:COG4570|pog:POG0353 gene gene52 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_53 NVP1176O_54 NVP1176O_54 NVP1176O_54 31753 32427 + winged helix-turn-helix DNA-binding domain protein NVP1176O_54%3B InterPro:IPR011991 gene gene53 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_54 NVP1176O_55 NVP1176O_55 NVP1176O_55 32497 33585 + rossmann-like alpha/beta/alpha sandwich fold protein NVP1176O_55%3B InterPro:IPR014729 gene gene54 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_55 NVP1176O_56 NVP1176O_56 NVP1176O_56 33567 33716 + coil containing protein NVP1176O_56 gene gene55 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_56 NVP1176O_57 NVP1176O_57 NVP1176O_57 33731 33871 + hypothetical protein NVP1176O_57 gene gene56 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_57 NVP1176O_58 NVP1176O_58 NVP1176O_58 33877 34173 + hypothetical protein NVP1176O_58 gene gene57 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_58 NVP1176O_59 NVP1176O_59 NVP1176O_59 34173 34505 + hypothetical protein NVP1176O_59%3B tara_best_match:OM-RGC.v1.029345843~cvp_best_match:CAMPEP_0000011790 gene gene58 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_59 NVP1176O_60 NVP1176O_60 NVP1176O_60 34697 35179 + coil containing protein NVP1176O_60 gene gene59 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_60 NVP1176O_61 NVP1176O_61 NVP1176O_61 35885 35998 + hypothetical protein NVP1176O_61 gene gene60 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_61 NVP1176O_62 NVP1176O_62 NVP1176O_62 35991 36248 + hypothetical protein NVP1176O_62 gene gene61 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_62 NVP1176O_63 NVP1176O_63 NVP1176O_63 36254 36373 + hypothetical protein NVP1176O_63 gene gene62 http://www.ncbi.nlm.nih.gov/gene/?term=NVP1176O_63