LOCUS AB012574 7965 bp DNA circular PHG 04-DEC-2008 DEFINITION Vibrio phage Vf12 DNA, complete genome. ACCESSION AB012574 VERSION AB012574.1 KEYWORDS . SOURCE Vibrio phage Vf12 ORGANISM Vibrio phage Vf12 Viruses; ssDNA viruses; Inoviridae; unassigned Inoviridae. REFERENCE 1 AUTHORS Chang,B., Taniguchi,H., Miyamoto,H. and Yoshida,S. TITLE Filamentous bacteriophages of Vibrio parahaemolyticus as a possible clue to genetic transmission JOURNAL J. Bacteriol. 180 (19), 5094-5101 (1998) PUBMED 9748441 REFERENCE 2 (bases 1 to 7965) AUTHORS Chang,B., Taniguchi,H. and Yoshida,S. TITLE Direct Submission JOURNAL Submitted (24-MAR-1998) Contact:Bin Chang University of Occupational and Environmental Health, Department of Microbiology; 1-1 Iseigaoka, Yahatanishiku, Kitakyushu, Fukuoka 807-8555, Japan FEATURES Location/Qualifiers source 1..7965 /organism="Vibrio phage Vf12" /mol_type="genomic DNA" /host="Vibrio parahaemolyticus" /db_xref="taxon:127511" /note="replicative form DNA of Vf12; synonym: bacteriophage Vf12" gene join(7348..7965,1..591) /gene="vpf402" CDS join(7348..7965,1..591) /gene="vpf402" /codon_start=1 /transl_table=11 /product="Vpf402" /protein_id="BAA33520.2" /translation="MSWCPSPTRPLNNVSIWGCSMTTATNILKSFDEQSVHIDYLCFT FAVKDLRHCHDAVRRLHKHEEYKGFAKSGLLQRHCRAPKFPAPPVFNPTVAQTSDEID AYNKAFDICYRNYLEDCLRIFTNQVLGLSLSAPRGLGFQFYTESMKLTSPDGEDFCGF VGIGGNNDTVHFQINGTGCKHVFARRPTWSLHDWLTNVLGVQTLARVDLAYDDYDGIF DCEYAYKAWRDDCFRTAERGRGPVLHEDMTIASIGKDGKPIYTKEQYSIGSRTSRIYW RIYNKALEQKLANTGLVWYRSEVELKKWNVDVLLNPAGAYAALNDFAASISTAKKFNT KPVPTKRAALDLLASAHWMRRQYGKILNSLIEFHEGDIETVVGSLVRDGTKFTFPDTY GKLVTHILET" gene 595..948 /gene="vpf117" CDS 595..948 /gene="vpf117" /codon_start=1 /transl_table=11 /product="Vpf117" /protein_id="BAA33514.1" /translation="MAKSVFVLGMDITWNSARGDSAQLNVSRPLREINSEKFKRRTIG ESGDVNPQWDQPLMIDHQYALLLERTGALVPRREYQLRLEINPEDPLAGAIVTELIPV DDDIKKHFEASLKAK" gene 960..1205 /gene="vpf81" CDS 960..1205 /gene="vpf81" /codon_start=1 /transl_table=11 /product="Vpf81" /protein_id="BAA33515.1" /translation="MPVCALPNADGFLAVVPDIEAASCSGYVMVTAQEYDTLMSYTQL TPGEISQAFGLGFTLVFVGGYLSTYAIKMAIRLIKLL" gene 1216..1449 /gene="vpf77" CDS 1216..1449 /gene="vpf77" /codon_start=1 /transl_table=11 /product="Vpf77" /protein_id="BAA33516.1" /translation="MKRLNALKKFGKQAAATVTVAVLSVPAMAAEGGAADPFSAIDLS GVATKIGAAGLVIVGITMAYKSITLAKRAVNKA" gene 1583..3058 /gene="vpf491" CDS 1583..3058 /gene="vpf491" /codon_start=1 /transl_table=11 /product="Vpf491" /protein_id="BAA33517.1" /translation="MNHYLRFFIALVILCASSHTYALEARIGYMQMRGCGSQGDWVDP YKVNTCFLDTGYFDSCTFEKTPYSDARYPYQTVCDNGLGLAYYEVRCPENSEFDPSTL RCKSVCEYGKNPDGTCMDACQFKKSIDETKLLQWVAYVYGEQVTGACYGDFGATRCEL GRVPSDTTLCTDVESGQWTQNTLCHGNFQFTGNQCEGGTLFWGKDGPDTPIIPDDPIH DPDDPTGDIEDPSVLPDGSTNTVNPPDTEKKPDVEDPDTDDSTDMAVLNAIKGLNSDV NKALNDMNIDINQASADVQNQIIALNASMVTNTQAIQKQQINDNKIYENTKALIQQAN ADITTAVNKNTNAINGVGDDVEKIAGAMDGIAEDVSGISDTLDGIANTDTSGAGTGGT CIESQTCTGFYESAYPDGLGGLVSGQLDSLKHNTIDNFVSSFGDLDLSSAKRPSFVLP VPFFGDFSFEEQISFDWVFGFIRAVLIMTSVFAARRIIFGG" gene 3060..3374 /gene="vpf104" CDS 3060..3374 /gene="vpf104" /codon_start=1 /transl_table=11 /product="Vpf104" /protein_id="BAA33518.1" /translation="MEWLVDLFNKLLVFLYQLLISLVNMLKDLFFWAVEQIMAMVNLL LSGVFSLFAPVDMSQYMTSIPPTVAWVMAAVGVPQCLSIILAAITVRLMLQLIPFTRL GS" gene 3371..4513 /gene="vpf380" CDS 3371..4513 /gene="vpf380" /codon_start=1 /transl_table=11 /product="Vpf380" /protein_id="BAA33519.1" /translation="MIYAIAGRPGGGKTYEAVAYHIIPAIKDGRKVITNITLNIDWFV KVFGEDVRELIKIVDGRLTDFGSTTRPFSQIEDYSDEWRNEKGQGPLYVVDEAHMSLP SRGLAAPILEWYSIHRHYGVDIILLTQNIRKVHRDIKDMIEVTYRCTKNTAMGSTSSY TKKVQDGCAGEVVNTSTRFYKSEYFPFYKSHSQSNKQVQEAEAKDIRPFWKRWPVVGT GVLLSLGLVFNIWAWWPESEQPPDPVKPPQPVQAQLPDGTPTVDTAETKAKKKKKASG FGPLEDYDFYITGYAKQIAYAKRLKYAAELDRDLTFYKIYIDVYDGRDKLFSFDHLDL VKIGYQFEVLSDCVYRVTWEETERIFTCGQREKPSDILQQNMPVHI" ORIGIN 1 gttgacttgg cctatgacga ttacgacggg atttttgatt gcgaatacgc ttacaaggcg 61 tggcgtgacg actgtttccg caccgctgaa cgtggtcgtg gtcctgtgct tcatgaagac 121 atgaccattg ccagtatcgg caaagatggc aaaccgattt acaccaaaga gcaatactcg 181 attggttcgc gtacctcgcg catttactgg cgtatctaca acaaggctct tgagcagaaa 241 ctcgcgaaca cgggtcttgt ctggtaccgc tctgaagtcg agctgaaaaa atggaatgtt 301 gatgtgttgc tgaatccagc tggcgcgtat gccgcgctga atgatttcgc tgcctcgatt 361 tctaccgcta agaaattcaa taccaaacct gtcccgacga aacgcgcggc gttagacctg 421 ttggcctctg cgcactggat gcgtcgccag tacgggaaaa tccttaattc acttatcgag 481 ttccatgagg gcgacattga aaccgtggtc ggttcccttg tccgtgatgg aacgaaattc 541 accttccccg atacctacgg caagttggtg actcacatat tggagactta acaaatggct 601 aaatccgttt ttgtacttgg catggatatc acttggaact cagcacgtgg tgacagtgct 661 caactgaacg tgtcgcgtcc tctacgtgaa atcaactcgg agaaattcaa acgccgcact 721 atcggtgaat ccggtgatgt gaatccccaa tgggatcaac cgttgatgat tgatcatcaa 781 tacgccctat tacttgagcg tacgggtgct ctcgttcctc gtcgtgaata ccaattgcgc 841 ttggagatta acccagaaga cccattggcg ggtgccattg tgacagaact catccctgtg 901 gatgacgaca tcaagaaaca ttttgaagcc tcgctaaagg ctaaataagg aatttcgtta 961 tgcctgtgtg tgctctaccg aacgcggacg gttttctcgc tgtcgttcct gacattgaag 1021 cggcttcatg cagtggttat gtcatggtga cggctcaaga atatgacacg ttaatgagct 1081 acacacagct gactccagga gagatatctc aagcgttcgg cttgggtttt accttggtgt 1141 tcgttggcgg ctatctctca acttacgcca tcaagatggc aatacgttta ataaaactac 1201 tttgaggaat ctgttatgaa acgtctaaac gcgcttaaaa agttcggtaa acaagcggcg 1261 gcaaccgtca ctgttgcggt gctttctgtc cctgctatgg cggcggaagg tggtgcggct 1321 gacccgttct ccgctatcga cttatctggt gtggcaacca aaatcggcgc ggcaggtctg 1381 gtgattgtcg gcattactat ggcttacaaa tccatcactc ttgctaagcg tgctgtgaac 1441 aaggcttaag tttatgttgg ccgttctcca cgatgtccaa ctcatcgtct ttgtgctttt 1501 gggtggcatt gccggatacg tggccagcca aaactttaga ggataagggg gcttcggctc 1561 ccttttttat tggttttata caatgaatca ctatctccgt ttttttattg cccttgttat 1621 tctgtgtgct agtagtcata cgtatgcttt agaagcgcgt attggttata tgcaaatgag 1681 gggttgtggc tctcaaggtg attgggttga cccttacaag gtgaatactt gttttttgga 1741 tactgggtat ttcgactcat gcacatttga gaagacaccc tattctgatg ctcgctatcc 1801 ctatcaaacg gtttgtgata atgggctcgg tcttgcttat tacgaggttc gttgtccaga 1861 aaatagcgaa tttgaccctt caaccttacg ttgcaaatca gtttgtgaat atggcaaaaa 1921 ccctgacggc acctgtatgg acgcttgcca gttcaaaaaa tccattgatg aaaccaagct 1981 gcttcaatgg gttgcgtacg tctacggtga acaagtcact ggggcatgct atggcgactt 2041 tggggcaacc cgttgcgaac taggccgcgt tcccagtgat actacgcttt gtacggatgt 2101 cgagtctggt caatggactc aaaacacatt atgccacggt aacttccagt tcacgggcaa 2161 tcaatgtgaa ggcggtacac tcttctgggg taaagatggc cctgacactc ctatcattcc 2221 tgatgaccca attcatgacc ctgacgaccc aacaggcgac atcgaagacc ctagcgtatt 2281 acctgatggc tcaaccaata cggtgaatcc accggatact gagaaaaagc cggatgttga 2341 agaccctgat actgatgatt caacagacat ggcagtattg aatgcgatta aaggcttgaa 2401 ctcggatgtc aacaaggcgc taaatgatat gaacatcgac atcaatcaag ccagtgctga 2461 cgttcaaaac caaatcattg cattgaatgc gtcgatggtc accaatacgc aagccattca 2521 aaagcagcaa atcaacgaca ataagattta cgaaaacact aaggccctta tccaacaagc 2581 gaatgctgac atcaccacgg ccgtgaacaa gaataccaat gccattaatg gtgtgggtga 2641 tgatgtagag aaaattgcag gggcaatgga tggtatcgcg gaggatgttt ccggcatttc 2701 cgacacctta gacggcattg ccaacacaga tacgtctggc gcaggtacgg gtggtacgtg 2761 catcgaatct caaacctgta caggttttta tgagtcggcc tatcccgatg gcttaggtgg 2821 tttggtgtct gggcagttag acagtctcaa acacaacacc atcgacaact ttgtcagctc 2881 gtttggtgac ctcgacttat ccagtgccaa gcgcccttct ttcgtgctcc ctgtgccctt 2941 cttcggtgac ttcagttttg aagagcaaat cagctttgat tgggtgttcg gttttattcg 3001 tgcggtgctc atcatgacgt cagtgtttgc ggcgcgtcgt atcatcttcg gaggttaata 3061 tggaatggtt agtcgattta tttaacaagc tgttggtgtt cctctatcag cttttaatct 3121 cgctggtcaa catgctcaaa gacctgttct tttgggcggt tgagcaaatc atggcaatgg 3181 tgaatctgtt gctctctggt gtcttctccc tattcgctcc ggtcgatatg agccagtaca 3241 tgacaagtat tccgcctacc gtggcttggg ttatggcagc ggtcggtgtg cctcaatgcc 3301 tgtctatcat tctggccgct attacggtgc gtttgatgct gcaattgatt ccgtttacga 3361 ggttaggctc atgatatacg ccatagcagg gagaccaggt ggcggtaaaa cctatgaggc 3421 tgtcgcctat cacatcattc cggccattaa agatggccgc aaagtcatca ccaatatcac 3481 cttaaacatt gattggttcg ttaaggtgtt tggtgaagac gttcgagaac tcatcaaaat 3541 cgtggatgga cgtttaacgg atttcggttc gactacgcgc ccgttcagcc agattgaaga 3601 ctactccgac gaatggcgta atgaaaaagg acaagggcca ctttatgtgg tcgatgaggc 3661 gcacatgagc ttgccaagtc gaggcttggc cgcgccgatt ctagaatggt actcaataca 3721 ccgtcactac ggtgtcgata tcatcttgct cacgcagaac atccgcaaag tgcatcgaga 3781 cattaaggac atgattgaag tgacctaccg atgcacaaag aacacggcca tgggctcaac 3841 cagttcttac accaagaaag tgcaagatgg ttgtgccggt gaagtggtga acacctctac 3901 ccgattttat aagtcggaat acttcccgtt ctataagagt cattcgcaat ccaacaagca 3961 agttcaggaa gccgaagcaa aagacattcg cccgttctgg aagcgttggc ctgtcgtcgg 4021 aacgggggtg ctgttatcgc ttggattggt tttcaatatc tgggcttggt ggccagagtc 4081 agagcaaccg cccgaccccg ttaaaccacc acaaccagta caagcgcagc tgcctgacgg 4141 aacgccaacg gtagatacgg cagaaaccaa agcgaagaag aaaaagaaag catcagggtt 4201 cgggcctttg gaagattacg acttctacat caccggatac gcaaagcaaa tcgcctacgc 4261 caaacggctg aagtatgctg ccgaactcga ccgtgacctg acgttctaca agatatacat 4321 cgatgtgtac gatggccgcg acaagctatt cagtttcgat catctggact tggtaaagat 4381 tgggtatcag ttcgaagtgt tgagcgactg cgtatatcga gtgacttggg aagaaacaga 4441 aaggatcttc acgtgcggcc aaagagaaaa gccatcagat atattgcagc aaaacatgcc 4501 tgtccatatc tagaccgctc gccacagcgt cgaagctagc gcagtctgcg tagaccgagg 4561 aagcggaaca tgtaggacac caaaccttgg cacttccaca ccgaacttaa tcatggggct 4621 ctatacgagc ccttttttat tacgtgcgcg gtattgcgag cattttggga ggggcccgct 4681 ttgcgggagg gacctaaaag cggagcaaac ccccgaatct gtattacggg ggtaaattcc 4741 tactcagtac taaccttgtg tgccgccccc tctcaaaaaa cgaaataaga atgctcaatt 4801 gaaaatgaac agatatagca ttaaagtttt ctaattcgct caacattatt agtgtcggat 4861 tcgtcaaagt tatcttcttt tcctaataat tcattttcaa ttttacttat cgtttcattc 4921 agataggttg tcaaatcgtc cgtcgctttc ttacttttat tgaggtttcc tagcattccg 4981 acatattttt ttccgtcact gcctatcctt actcccaaga gttcttctat agattttata 5041 ttcatcagca catccataac tgcgttttgt cgagaaatgg aattctcttt ttgggctagg 5101 tacttccttt ctctttcagc gatttcattt tttagctgaa gtattttttc atttaaatct 5161 tccgcatttc gctcatataa ggctatttct tctttttttt cggctatgct atgttttaac 5221 attgaccttt cttgttccca cccttccagt tctttatcga ctaacttctc ttgatatgcc 5281 ttggttgatt tatattctaa agctaatatt tttgcttgag acctatatgt aattgccttt 5341 cgcttttctc tagcattaat tacaagctta tcaattaaaa cttgtagcca gtctgccata 5401 actatgtata cgagagctaa agccatgcat tgtaggagaa gtgtataatc aaagtgatag 5461 gactctagca tagttaattt tttgtcgggg ctgacaataa aaaatttagc tatcattgga 5521 acgttggcca ctagatacat taaggacgat atccccaaaa atgggcttct catcctagat 5581 aaaatggcat caagaaactc tttcattttt caaacctata taaaatgcga ttttcgtata 5641 gtaacaggtg ttcatattac ttgttaaaaa atgccgctaa aatgcggcac ttatactaac 5701 tgatcatttt tgctattgac cttgcaatct ttaacaactt tgctgtcgtt ttaagatcta 5761 gctcagagct tatttcaatg agagctatcc ctgttaggat ttgttgagca cttacttttt 5821 gtcctgtggg taactctatt ttgtcataat gcattttgaa acctctccat tgctcgtggg 5881 gacttagctc tctgccctta ctcattcgca taagcctttt gcactcagga ggaatggttt 5941 tccctttatc ccattctttg accgttctca cagtttttaa acaaagttca gcagcttgtt 6001 cgacggataa accacattca aattcacgaa aaatataatt tttagtcatt tcgtgatact 6061 tcattgaata gtccctcaaa agagagacat tttataggac tagcatatgc aatcgcattc 6121 aacataagca gatataatgc gcactgtaat agtggttcct gtggacttgc aatcactaaa 6181 gccaatccgg cacaaactat tgaaatgctt gataatccaa gtccgttata cttttttgca 6241 atgctttccc acatgctttt tatagctggg ttttcattgc gatcagcgtg acatcctagc 6301 aacgcaatct ccgggtctat acctgcgccg tgtgctagaa aaactgcttc ttcatcagta 6361 agttgtctaa cacctttgcg aattttacta atcttcggcg ggtctagatt caaatcgtgc 6421 gcaacctgct tatcttgtac gtagtttttc gcctttttgt aggcgttaat tagttcagct 6481 gtgtacataa gaacctccat ttcttctcat tgtagccaca aagttgccat aaatcgcatc 6541 ttgcagttgc cattctttgc aactacgatt gccataaatc gcaattggtc aggtgtcatt 6601 atgcttacgg aacaaatcaa atcccttatc gaaaatgaat gtgcgcttag tcctcgactt 6661 actggcgtgt tcttccgtaa gcacctgaat caatctatgt atggtgatga cggccagctc 6721 actgagttcg ccattcaatg ccatcactac tttaacgaac tcaaacgcgc tgcagagcaa 6781 aaagcctttc atgctcgtct tgaacaatgt cgtcttcaac acgaacaaca gcaagaatca 6841 gttaaacgcg ttaatcagtc cgtaaagaaa tccgctaacc aatcacgagc tcagttcatt 6901 ggctctctgc gctttgaact caatcaaggc gttctgatgg ttcgctcggt ttctcgttca 6961 atgccaactc caaccaaatg gattcgtcgt tatctcaaga aacttggcgt acgtcgcctt 7021 ggtaagtctt tgtctaacgg tgttttattt actggtgacg ctgtcactga aatcctcgct 7081 tgtttgcaag ctaaacaggc taagaacgac accataccgt ttgaactgaa tatcagcgcc 7141 ctgccgattt tagcttggtt tcgttcgcca ctcagccttg gcactccaac attggaggct 7201 cagtgctcat gaacgaagct caaatcatct attacgactt gctacctgac tacacggtgt 7261 ctgtgttggt caaaggttgc gacgaatggg atttacttaa atccatgtct catcttgagt 7321 cttgggcttc gtctcagttc gcttcttatg agttggtgtc catcaccaac acgaccgttg 7381 aacaacgtat caatatgggg gtgttcgatg actactgcaa ctaacatcct taaaagtttc 7441 gatgagcaaa gcgttcatat tgattacctg tgttttacgt ttgccgtgaa agacttacgt 7501 cattgtcacg atgcggttcg tcgattgcac aagcatgagg aatacaaagg ctttgccaaa 7561 tctggactgt tacagcgtca ctgtcgtgcg cctaagttcc ctgctccacc tgtgtttaat 7621 ccgacggtcg ctcagacttc cgacgagatt gatgcgtaca acaaagcgtt tgatatctgc 7681 tatcgcaatt acttagaaga ttgcttgcgc atcttcacca atcaagtgct tggtttgtcg 7741 ctgtctgcgc ctcgcggttt gggtttccag ttctacaccg aatccatgaa actgacttcg 7801 ccagatggtg aggacttctg cggcttcgtt ggtatcggcg gtaacaatga cacggtgcat 7861 ttccaaatca acggaacggg atgcaagcat gtatttgccc gtcgtcctac gtggtcgcta 7921 catgactggc tgaccaatgt gcttggtgtg caaactctgg cgcgt //