LOCUS KR063267 5714 bp DNA linear PHG 03-OCT-2015 DEFINITION Vibrio phage pre-CTX, complete genome. ACCESSION KR063267 VERSION KR063267.1 KEYWORDS . SOURCE Vibrio phage pre-CTX ORGANISM Vibrio phage pre-CTX Viruses; ssDNA viruses; Inoviridae; unclassified Inoviridae. REFERENCE 1 (bases 1 to 5714) AUTHORS Monakhova,E.V., Pisanov,R.V. and Mikhas',N.K. TITLE [The genome polymorphism of Vibrio cholerae ctxAB(-) strains, containing the proximal part of the CTX element] JOURNAL Zh. Mikrobiol. Epidemiol. Immunobiol. 1, 23-29 (2004) PUBMED 15024976 REFERENCE 2 (bases 1 to 5714) AUTHORS Monakhova,E.V. and Pisanov,R.V. TITLE Direct Submission JOURNAL Submitted (03-APR-2015) Cholera Microbiology, Research Institute for Plague Control, 17/40 M. Gorkogo, Rostov-on-Don, Rostov region 344002, Russia COMMENT ##Assembly-Data-START## Assembly Method :: Contig Express v. 1 Sequencing Technology :: Illumina ##Assembly-Data-END## FEATURES Location/Qualifiers source 1..5714 /organism="Vibrio phage pre-CTX" /mol_type="genomic DNA" /isolation_source="sewage" /host="Vibrio cholerae O1 biovar El Tor 15500" /db_xref="taxon:689414" /country="Ukraine: Crimea" /collection_date="1991" gene complement(614..949) /gene="rstR" CDS complement(614..949) /gene="rstR" /codon_start=1 /transl_table=11 /product="RstR" /protein_id="ALF99874.1" /translation="MFSSKIRDLRVERDLNQEEVANGIGVGKNTYLAYEKGTQSPKLE TVEKLAKFYGVPIAELVSDSETNIDEKLKSKIRMIESLDEPEKESLFILMEALLMRSK SREIQKEFR" gene 1081..2160 /gene="rstA" CDS 1081..2160 /gene="rstA" /codon_start=1 /transl_table=11 /product="RstA" /protein_id="ALF99871.1" /translation="MKKQIFTLDELQLDTNASPFVFVDYLAWSVPYASFRHAHKSDLS SLIWAPLPKPDYRMARTPEQKEKLIELYKQKWNVAMMERLEVFCLHVLGLRMSPWRDK GLYGYENSCHLMSKYSNKHVGFVALGGNRNTCYFQIEGVGCRTVLEHTSLFRLHWWLD LLGCSRLSRIDLAVDDFHGLFGREYAKKAYSDDAFRTARAGRAPNGGERLVSEPNGKI INESFEVGSRESRIYWRIYNKAAQLGLDMHWFRNEVELKDMPIDVLLNIEGYFAGLCA YSASIINSLPVKVVTKKRQVALDIHSRIKWARRQVGKTLFDISKHFGGDLERVFGALI SKEIHDDSLNLPDSYMKLIDEIMGD" gene 2141..2521 /gene="rstB" CDS 2141..2521 /gene="rstB" /codon_start=1 /transl_table=11 /product="RstB" /protein_id="ALF99872.1" /translation="MKLWVINMKSRFVVFGASHSEGVSSKTGAPYLIPVLFVGKPIRQ WKNDKGQCLTFGLQHQEVKFVSSDAMTRKLEQTAFPVLVTFDNEPDPEDPSRNLVIDY QVVCSLFDNVPGGKPLDKPQPIKS" gene 2657..2905 /gene="cep" CDS 2657..2905 /gene="cep" /codon_start=1 /transl_table=11 /product="core encoded pilin" /protein_id="ALF99873.1" /translation="MFSSLKNKLNTFKSTLSLGVFLLFSAFANQALAAADAGLVTEVT KTLGTSKDTVIALGPLIMGVVGAIVLIVTVIGLIRKAK" CDS 2916..4199 /note="OrfU" /codon_start=1 /transl_table=11 /product="pIII-CTX" /protein_id="ALF99875.1" /translation="MAGSLWLSGHHYRLCVGLIFGLREEGERSPFFMRYFLLFLTLLF LSPSVTASAINCDPNTTTSHQLLFGFGSPIVQSVLFDGCMLDIEKDDYGFVWSCLSNE NGDYCKGLYKPRFSQGVSPNWPMCDLSGASAERCIYPYCPEGEECVPLPPSPPSDSPV DGLSSSFKSAFNQVYKNQSEMASTLNHVSGQVSHSQDMVQLNTKFHADRVLESVTAVN NRLGGQMEYLEEIRIDVWDTQREVRKAKDELYSRVAAVSYDVLYSELNVLRAIDELKD SLGGTVVPPHPDQPNPTPPDSSSPNYTGALNTISKKLNTLETISQQLDTMNTALSGRC SNPARCQFPIREAETELETAQQNLKQMINEKITQSALHQFKGSAAVPSFCSYVEAFGY NLCFDFSLFSENLHIIRMIVLAMAYILAAMLILFR" gene 4196..4489 /gene="ace" CDS 4196..4489 /gene="ace" /codon_start=1 /transl_table=11 /product="accessory cholera enteritoxin" /protein_id="ALF99876.1" /translation="MMLMMDTLYDWLIDGFTWLVIKLGIMWIESKIFVIQFFWEMSQK VIDMFTIYPLIQQAIDMLPPQYSGFLFFLGLDQALAIVLQALMTRFALRALNL" gene 4486..5685 /gene="zot" CDS 4486..5685 /gene="zot" /codon_start=1 /transl_table=11 /product="zonula occludens toxin" /protein_id="ALF99877.1" /translation="MSIFIHHGAPGSYKTSGALWLRLLPAIKSGRHIITNVRGLNLER MAKYLKMDVSDISIEFIDTDHPDGRLTMARFWHWARKDAFLFIDECGRIWPPRLTATN LKALDTPPDLVAEDRPESFEVAFDMHRHHGWDICLTTPNIAKVHNMIREAAEIGYRHF NRATVGLGAKFTLTTHDAANSGQMDSHALTRQVKKIPSPIFKMYASTTTGKARDTMAG TALWKDRKILFLFGMVFLMFSYSFYGLHDNPIFTGGNDATIESEQSEPQSKATVGNAV GSKAVAPASFGFCIGRLCVQDGFVTVGDERYRLVDNLDIPYRGLWATGHHIYKDTLTV FFETESGSVPTELFSSSYRYKVLPLPDFNHFVVFDTFAAQALWVEVRRGLPVKKEKEE SIIKSFL" ORIGIN 1 attatgtggc gcggcattat gttgaggggg agtcgtcagt accattgcgc cagcactgac 61 ggcctcactt gcagcagaac gtgggcagct tgctgaatcg ttctgccaaa gtgagcccgt 121 aacataatgg cgagtaatac gcattaaggc ggtaactcag ccccgcaggg actagaccta 181 acgttaggtt cgtcgctcac cgttctgatg ctactgcata tccaaggctg ctttagcact 241 cgcagaagtt cgcttgattg ctcaagcgtt cccgtcagtg aaatgatcct ctttctgata 301 gcgccagaaa aaactccctt cgtcctgcca agcccatttg gaagtctcag cacacgcaga 361 gggtaacagc atttttcatg gatacgttca gcacccaagg cgcggcgaga gtcgagcaag 421 cctcttatac tgcgacagcg gcaggtgaga acataagcga cgtagcgtgc ggagtcgcgt 481 tgttagagcc tgtccgctgt ggtagacccc cgtctagtat tacgggggta aatcccacag 541 agcctgtgac actcaccttg tattcgcaag cgtagcgcgc cagtgtttga gcgctagcga 601 gtcttttgat tacctaccta aattcttttt gtatttctcg actcttactt ctcatcagca 661 aagcctccat caaaatgaat aatgactctt tttctggttc atcaagtgat tcaatcattc 721 ggattttcga tttcagcttt tcgtcaatgt ttgtttcgct atcgctgaca agttcagcta 781 ttggtacacc atagaatttt gctaattttt ctacagtttc cagttttggt gattgtgtgc 841 ctttttcata agctaaatag gtattttttc caacgccgat accatttgct acttcttctt 901 ggtttagatc tctctcaact cttaaatccc taatttttga actaaacata cataataccc 961 ctatagttgt gcttattttt gaacattata atccctgttt ttttggacag ttgtttacaa 1021 tcccaatatt ttgggatagc ctatcactac aaattgaact tgacaggttt ttgaaggcta 1081 atgaaaaagc agattttcac tcttgacgaa ttacagctcg atacaaacgc ttctccgttt 1141 gtttttgtcg attatcttgc ttggtcggtt ccttatgctt cattccgtca cgcgcataag 1201 tccgatttgt cctcgcttat ctgggcgcct cttcctaagc ctgattaccg tatggctcgc 1261 acccctgagc aaaaagagaa gttaatcgag ctttataagc agaagtggaa cgttgccatg 1321 atggaacgct tggaggtgtt ttgccttcat gttcttggtc ttcgtatgtc gccttggcgc 1381 gataaggggc tttatgggta tgaaaactca tgccatttga tgtcgaagta ctccaataaa 1441 cacgtgggct ttgttgcgct agggggaaac cgtaatacct gttacttcca aattgaggga 1501 gtagggtgtc gaaccgtgtt agagcacacc tctttattcc gtcttcattg gtggctcgat 1561 ttattaggtt gctctcgtct gtctcgtatt gatttagccg ttgatgactt tcacggtttg 1621 tttggccgtg agtacgccaa aaaagcctat tccgatgacg cctttcgcac cgctagagcg 1681 ggacgtgctc ctaacggtgg tgagcgatta gtctctgagc ctaatggcaa aattatcaat 1741 gaatctttcg aggtaggctc tcgtgaatct cgcatttact ggcgtatcta caacaaggct 1801 gctcagcttg gtttagatat gcactggttt cgtaatgagg tcgagcttaa agacatgcct 1861 atcgacgttc tgctcaatat cgaggggtat tttgcaggtt tgtgcgcgta ctcggcctca 1921 attatcaatt ccttgcctgt caaggtggtc acaaaaaagc gtcaagtggc gctcgatatc 1981 cactcacgca ttaagtgggc tcgtcgtcag gtcggtaaga cgttgtttga tatttcaaag 2041 cattttggtg gtgatttgga aagggtgttt ggggcgttga tttctaagga aattcacgac 2101 gattcactca accttccgga ttcttatatg aagttaattg atgaaattat gggtgattaa 2161 tatgaaatct cgttttgttg tttttggtgc ctctcattct gaaggggtga gtagtaagac 2221 tggtgcacct tatcttatcc cagtgctttt tgttggtaag ccgattcgcc agtggaaaaa 2281 cgataaaggc caatgtttga cgtttggctt gcagcatcag gaagtgaaat ttgtatccag 2341 tgacgcgatg accagaaaac tcgaacagac cgcctttccg gttcttgtca cgtttgacaa 2401 tgagccagac ccagaagacc catcgcgtaa cctcgtgatt gattatcaag tggtgtgttc 2461 cttgtttgac aacgtgccgg gcggcaagcc attggataaa cctcaaccca ttaaatcttg 2521 atggacttaa cccattatgt ctggaacgag gcgctctatt tcgcggtggt caaggccgtt 2581 ctcgttctgt tctttacatc ctttgggatt ggcgcggttg ccagtctcat tttatccacg 2641 gtaaaggaga agctacatgt ttagctcact gaaaaacaaa cttaatacct ttaaaagcac 2701 cctttcactc ggggttttct tgctgttttc cgcatttgct aaccaagcac tcgcggctgc 2761 tgatgcgggt ttggtcacgg aagtcaccaa aacactgggc accagtaaag atacggtgat 2821 tgcgcttggg ccgctcatca tgggcgtggt gggggcaatt gttctgattg ttaccgtgat 2881 tggcttaatt cgtaaggcta aatagtgctt gagttgtggc tgggtctctt tggctcagcg 2941 gtcatcatta tcggctttgt gtcgggctta tatttggttt aagggaggag ggcgagcgtt 3001 cgcccttttt tatgcgctat tttctactgt ttttgacatt gctctttctt tctccatcgg 3061 taacggcttc cgccatcaat tgtgatccta atactactac gtcacaccag ttacttttcg 3121 gttttggctc tcccattgtg caatcggtgt tatttgatgg ctgcatgctt gatattgaaa 3181 aagatgacta tggttttgtt tggtcttgtc tctcaaatga aaatggggac tattgcaagg 3241 ggctctacaa gccccgtttt tcacaagggg tatccccgaa ctggccgatg tgcgacttgt 3301 ccggagcatc tgcagagcgc tgcatttatc cttattgccc tgagggggaa gagtgcgttc 3361 ccttaccacc ttcaccgccc agtgattccc ctgttgatgg gctgagcagc tcgtttaagt 3421 ctgcgttcaa tcaggtctat aaaaaccaat cagagatggc ttcgactctc aatcatgtca 3481 gtggtcaggt gtcccactct caagatatgg ttcagctcaa tacgaagttt cacgcggatc 3541 gtgttcttga gagtgtcacc gcagtcaaca atcgtttggg tgggcaaatg gagtatcttg 3601 aggaaatccg cattgatgtt tgggatacgc aacgggaggt cagaaaagcc aaggatgagc 3661 tttactctcg tgttgcggct gtttcatacg atgtgcttta tagcgagctt aatgtccttc 3721 gggcgattga tgaacttaaa gactcactcg gtgggactgt cgttccgcct cacccagacc 3781 aacccaatcc cacgccaccc gatagcagca gccccaatta tacaggggcg cttaatacca 3841 tctctaaaaa gctcaatacc ttagagacga tttcacagca actcgacacc atgaacacgg 3901 cgctatcagg gcgctgtagt aaccctgctc gctgtcagtt tccgatacga gaggccgaga 3961 ccgagttaga aacggctcag cagaatttaa aacagatgat caacgagaaa atcacccagt 4021 cggctttgca tcagttcaaa ggctcggcgg cggtgccttc gttttgctcc tatgttgagg 4081 cgtttggtta caacctctgt tttgacttct ccctcttttc tgaaaacctg cacatcatcc 4141 gcatgatagt gctcgcgatg gcgtacattc tggccgccat gctcattttg tttaggtgat 4201 gcttatgatg gacacccttt atgactggct aattgatggc tttacgtggc ttgtgatcaa 4261 gctcggtatt atgtggattg agagcaagat ttttgtcatc caattcttct gggagatgtc 4321 ccagaaagtg attgatatgt ttaccatcta tccgcttatc caacaggcta tcgatatgct 4381 gcctcctcaa tacagcggct ttcttttctt tttggggtta gaccaagcgc tggctatcgt 4441 gcttcaggct ttgatgaccc gttttgccct gcgagcgtta aacctatgag tatctttatt 4501 catcacggcg cgccaggctc ttataaaacg tcaggggcat tatggcttcg tctgctgccg 4561 gcgattaagt caggccgtca catcatcacg aatgtgcgag gcttaaacct tgaacgcatg 4621 gctaagtact taaaaatgga tgtctcggac atcagtatcg agtttattga tactgaccat 4681 cctgacggtc gcttaacgat ggcgcgtttt tggcactggg cgagaaagga cgcgtttctc 4741 tttatcgatg aatgtggtcg catctggccg ccgagactga cggccaccaa tttaaaggcg 4801 ctcgacacgc cgccggattt ggtcgcagag gataggccgg agagctttga ggtggctttt 4861 gacatgcatc gtcaccacgg ctgggatatc tgcctaacca cgcctaacat tgccaaagtg 4921 cacaacatga taagagaggc ggcggagata gggtatcgcc actttaaccg cgccaccgtg 4981 gggctagggg caaagtttac cctgaccacc catgatgcag ccaactctgg acagatggac 5041 tcgcacgcgc tgacacgcca agtcaaaaaa attccaagtc cgatttttaa gatgtacgca 5101 agcaccacca caggcaaagc acgcgacacg atggccggaa cggcgctgtg gaaagacaga 5161 aagatccttt tcttgttcgg catggttttt ttgatgttct cttattcgtt ttacggctta 5221 cacgacaatc caatttttac agggggaaat gatgcaacta tcgagtcaga gcaatccgag 5281 cctcagtcaa aggctactgt tgggaatgct gtcgggagca aggcggttgc tcctgcgtct 5341 tttggttttt gtattggtcg gctttgtgtc caagatggtt ttgtcactgt tggtgatgag 5401 cgttatcgcc tcgtagacaa tttggacatt ccttatcgtg gtctatgggc gacaggtcat 5461 catatttaca aggatacgct tacggtgttt tttgaaaccg agagtggcag cgtcccaaca 5521 gagctttttt cgtctagcta ccgctacaag gtgctaccgt taccggattt caatcacttt 5581 gtggtgttcg atacctttgc agcgcaagcg ctgtgggtag aagtgagacg gggcttgcca 5641 gttaagaaag agaaagaaga gtcaattatt aaatcatttt tgtgatttat cctgccgcct 5701 tagtgcgtat tatg //