VSVS05_00004 SM00986 Uracil DNA glycosylase superfamily VSVS05_00004 SM00987 UreE urease accessory protein, C-terminal domain VSVS05_00008 SM00411 bacterial (prokaryotic) histone like domain VSVS05_00010 SM01209 VSVS05_00010 VSVS05_00010 SM01210 VSVS05_00010 VSVS05_00011 SM00798 AICARFT/IMPCHase bienzyme VSVS05_00011 SM00851 MGS-like domain VSVS05_00012 SM00422 helix_turn_helix, mercury resistance VSVS05_00013 SM00267 diguanylate cyclase VSVS05_00017 SM00878 Biotin carboxylase C-terminal domain VSVS05_00021 SM00479 VSVS05_00021 VSVS05_00024 SM00387 Histidine kinase-like ATPases VSVS05_00024 SM00388 His Kinase A (phosphoacceptor) domain VSVS05_00024 SM00448 cheY-homologous receiver domain VSVS05_00029 SM00421 helix_turn_helix, Lux Regulon VSVS05_00029 SM00448 cheY-homologous receiver domain VSVS05_00035 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSVS05_00035 SM00387 Histidine kinase-like ATPases VSVS05_00035 SM00388 His Kinase A (phosphoacceptor) domain VSVS05_00036 SM00448 cheY-homologous receiver domain VSVS05_00036 SM00862 Transcriptional regulatory protein, C terminal VSVS05_00043 SM00841 Elongation factor P, C-terminal VSVS05_00043 SM01185 VSVS05_00043 VSVS05_00057 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. VSVS05_00057 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. VSVS05_00058 SM00649 Ribosomal protein L11/L12 VSVS05_00064 SM00663 RNA polymerase I subunit A N-terminus VSVS05_00076 SM00479 VSVS05_00076 VSVS05_00091 SM00257 Lysin motif VSVS05_00091 SM00646 VSVS05_00091 VSVS05_00092 SM00853 MutL C terminal dimerisation domain VSVS05_00092 SM01340 VSVS05_00092 VSVS05_00096 SM00244 prohibitin homologues VSVS05_00097 SM00244 prohibitin homologues VSVS05_00100 SM00320 WD40 repeats VSVS05_00108 SM00838 Elongation factor G C-terminus VSVS05_00108 SM00889 Elongation factor G, domain IV VSVS05_00118 SM01005 Alanine racemase, C-terminal domain VSVS05_00125 SM00382 ATPases associated with a variety of cellular activities VSVS05_00145 SM00732 Likely ribonuclease with RNase H fold. VSVS05_00150 SM00731 SprT homologues. VSVS05_00154 SM00861 Transketolase, pyrimidine binding domain VSVS05_00156 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VSVS05_00164 SM00420 helix_turn_helix, Deoxyribose operon repressor VSVS05_00164 SM01134 VSVS05_00164 VSVS05_00166 SM00421 helix_turn_helix, Lux Regulon VSVS05_00170 SM00829 Enoylreductase VSVS05_00173 SM00563 Phosphate acyltransferases VSVS05_00178 SM00267 diguanylate cyclase VSVS05_00181 SM00400 zinc finger VSVS05_00181 SM00493 VSVS05_00181 VSVS05_00181 SM00766 DNA primase DnaG DnaB-binding VSVS05_00186 SM01207 VSVS05_00186 VSVS05_00187 SM00905 Dihydroneopterin aldolase VSVS05_00196 SM00257 Lysin motif VSVS05_00198 SM01091 Transporter associated domain VSVS05_00200 SM00382 ATPases associated with a variety of cellular activities VSVS05_00200 SM00962 SRP54-type protein, GTPase domain VSVS05_00200 SM00963 SRP54-type protein, helical bundle domain VSVS05_00212 SM00533 DNA-binding domain of DNA mismatch repair MUTS family VSVS05_00212 SM00534 ATPase domain of DNA mismatch repair MUTS family VSVS05_00214 SM00382 ATPases associated with a variety of cellular activities VSVS05_00215 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain VSVS05_00230 SM00829 Enoylreductase VSVS05_00251 SM00354 helix_turn _helix lactose operon repressor VSVS05_00253 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VSVS05_00264 SM01329 VSVS05_00264 VSVS05_00265 SM00917 LeuA allosteric (dimerisation) domain VSVS05_00266 SM00014 Acid phosphatase homologues VSVS05_00289 SM00838 Elongation factor G C-terminus VSVS05_00291 SM00358 Double-stranded RNA binding motif VSVS05_00291 SM00535 Ribonuclease III family VSVS05_00296 SM00073 Histidine Phosphotransfer domain VSVS05_00296 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSVS05_00296 SM00387 Histidine kinase-like ATPases VSVS05_00296 SM00388 His Kinase A (phosphoacceptor) domain VSVS05_00296 SM00448 cheY-homologous receiver domain VSVS05_00298 SM00954 Region found in RelA / SpoT proteins VSVS05_00301 SM01192 VSVS05_00301 VSVS05_00301 SM01193 VSVS05_00301 VSVS05_00303 SM00382 ATPases associated with a variety of cellular activities VSVS05_00305 SM00287 Bacterial SH3 domain homologues VSVS05_00308 SM00880 VSVS05_00308 VSVS05_00308 SM01118 VSVS05_00308 VSVS05_00310 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSVS05_00310 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSVS05_00313 SM00448 cheY-homologous receiver domain VSVS05_00313 SM00862 Transcriptional regulatory protein, C terminal VSVS05_00324 SM01387 VSVS05_00324 VSVS05_00325 SM00316 Ribosomal protein S1-like RNA-binding domain VSVS05_00325 SM00322 K homology RNA-binding domain VSVS05_00326 SM00028 Tetratricopeptide repeats VSVS05_00327 SM00347 helix_turn_helix multiple antibiotic resistance protein VSVS05_00333 SM00052 Putative diguanylate phosphodiesterase VSVS05_00333 SM00091 PAS domain VSVS05_00333 SM00267 diguanylate cyclase VSVS05_00339 SM00487 DEAD-like helicases superfamily VSVS05_00339 SM00490 helicase superfamily c-terminal domain VSVS05_00342 SM00937 VSVS05_00342 VSVS05_00344 SM00382 ATPases associated with a variety of cellular activities VSVS05_00350 SM00387 Histidine kinase-like ATPases VSVS05_00350 SM00433 TopoisomeraseII VSVS05_00351 SM00434 DNA Topoisomerase IV VSVS05_00352 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VSVS05_00353 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VSVS05_00364 SM00749 bacterial OsmY and nodulation domain VSVS05_00380 SM00842 Cell division protein FtsA VSVS05_00381 SM00864 Tubulin/FtsZ family, GTPase domain VSVS05_00381 SM00865 Tubulin/FtsZ family, C-terminal domain VSVS05_00384 SM00957 SecA DEAD-like domain VSVS05_00384 SM00958 SecA preprotein cross-linking domain VSVS05_00387 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain VSVS05_00388 SM00851 MGS-like domain VSVS05_00388 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain VSVS05_00393 SM00518 AP endonuclease family 2 VSVS05_00394 SM00986 Uracil DNA glycosylase superfamily VSVS05_00394 SM00987 UreE urease accessory protein, C-terminal domain VSVS05_00402 SM01133 VSVS05_00402 VSVS05_00403 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain VSVS05_00409 SM00382 ATPases associated with a variety of cellular activities VSVS05_00411 SM00838 Elongation factor G C-terminus VSVS05_00411 SM00889 Elongation factor G, domain IV VSVS05_00415 SM00342 helix_turn_helix, arabinose operon control protein VSVS05_00418 SM00382 ATPases associated with a variety of cellular activities VSVS05_00419 SM00858 VSVS05_00419 VSVS05_00429 SM00028 Tetratricopeptide repeats VSVS05_00444 SM00116 Domain in cystathionine beta-synthase and other proteins. VSVS05_00445 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSVS05_00445 SM01358 VSVS05_00445 VSVS05_00449 SM01323 VSVS05_00449 VSVS05_00458 SM00448 cheY-homologous receiver domain VSVS05_00458 SM00862 Transcriptional regulatory protein, C terminal VSVS05_00459 SM00091 PAS domain VSVS05_00459 SM00387 Histidine kinase-like ATPases VSVS05_00459 SM00388 His Kinase A (phosphoacceptor) domain VSVS05_00464 SM00382 ATPases associated with a variety of cellular activities VSVS05_00486 SM00925 MltA specific insert domain VSVS05_00494 SM00564 beta-propeller repeat VSVS05_00495 SM00382 ATPases associated with a variety of cellular activities VSVS05_00499 SM00116 Domain in cystathionine beta-synthase and other proteins. VSVS05_00499 SM01240 VSVS05_00499 VSVS05_00508 SM00849 Metallo-beta-lactamase superfamily VSVS05_00508 SM01027 Beta-Casp domain VSVS05_00509 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSVS05_00515 SM00507 HNH nucleases VSVS05_00516 SM00857 Resolvase, N terminal domain VSVS05_00544 SM00448 cheY-homologous receiver domain VSVS05_00547 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSVS05_00564 SM00271 DnaJ molecular chaperone homology domain VSVS05_00571 SM01091 Transporter associated domain VSVS05_00574 SM00062 Bacterial periplasmic substrate-binding proteins VSVS05_00575 SM01211 VSVS05_00575 VSVS05_00583 SM00363 S4 RNA-binding domain VSVS05_00584 SM00463 Small MutS-related domain VSVS05_00610 SM00861 Transketolase, pyrimidine binding domain VSVS05_00613 SM00881 CoA binding domain VSVS05_00621 SM00861 Transketolase, pyrimidine binding domain VSVS05_00626 SM00981 VSVS05_00626 VSVS05_00634 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs VSVS05_00634 SM00475 5'-3' exonuclease VSVS05_00636 SM00267 diguanylate cyclase VSVS05_00637 SM00028 Tetratricopeptide repeats VSVS05_00665 SM00382 ATPases associated with a variety of cellular activities VSVS05_00666 SM00091 PAS domain VSVS05_00666 SM00387 Histidine kinase-like ATPases VSVS05_00666 SM00388 His Kinase A (phosphoacceptor) domain VSVS05_00667 SM00382 ATPases associated with a variety of cellular activities VSVS05_00667 SM00448 cheY-homologous receiver domain VSVS05_00672 SM00382 ATPases associated with a variety of cellular activities VSVS05_00684 SM00463 Small MutS-related domain VSVS05_00691 SM00671 Sel1-like repeats. VSVS05_00695 SM00825 Beta-ketoacyl synthase VSVS05_00697 SM00859 Semialdehyde dehydrogenase, NAD binding domain VSVS05_00707 SM00382 ATPases associated with a variety of cellular activities VSVS05_00709 SM00342 helix_turn_helix, arabinose operon control protein VSVS05_00710 SM00899 VSVS05_00710 VSVS05_00714 SM00836 DALR anticodon binding domain VSVS05_00714 SM01016 Arginyl tRNA synthetase N terminal dom VSVS05_00717 SM00855 Phosphoglycerate mutase family VSVS05_00719 SM00382 ATPases associated with a variety of cellular activities VSVS05_00719 SM00962 SRP54-type protein, GTPase domain VSVS05_00722 SM00448 cheY-homologous receiver domain VSVS05_00724 SM00073 Histidine Phosphotransfer domain VSVS05_00724 SM00260 Two component signalling adaptor domain VSVS05_00724 SM00387 Histidine kinase-like ATPases VSVS05_00724 SM01231 VSVS05_00724 VSVS05_00725 SM00448 cheY-homologous receiver domain VSVS05_00727 SM00260 Two component signalling adaptor domain VSVS05_00728 SM00260 Two component signalling adaptor domain VSVS05_00730 SM00382 ATPases associated with a variety of cellular activities VSVS05_00749 SM00448 cheY-homologous receiver domain VSVS05_00753 SM00382 ATPases associated with a variety of cellular activities VSVS05_00755 SM00493 VSVS05_00755 VSVS05_00757 SM00345 helix_turn_helix gluconate operon transcriptional repressor VSVS05_00757 SM00866 VSVS05_00757 VSVS05_00770 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VSVS05_00775 SM00052 Putative diguanylate phosphodiesterase VSVS05_00778 SM00840 VSVS05_00778 VSVS05_00780 SM00316 Ribosomal protein S1-like RNA-binding domain VSVS05_00786 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain VSVS05_00786 SM00437 Bacterial DNA topoisomerase I DNA-binding domain VSVS05_00786 SM00493 VSVS05_00786 VSVS05_00793 SM00354 helix_turn _helix lactose operon repressor VSVS05_00795 SM00448 cheY-homologous receiver domain VSVS05_00795 SM00862 Transcriptional regulatory protein, C terminal VSVS05_00813 SM00357 Cold shock protein domain VSVS05_00815 SM00382 ATPases associated with a variety of cellular activities VSVS05_00816 SM01086 C-terminal, D2-small domain, of ClpB protein VSVS05_00831 SM00278 Helix-hairpin-helix DNA-binding motif class 1 VSVS05_00832 SM00382 ATPases associated with a variety of cellular activities VSVS05_00843 SM00028 Tetratricopeptide repeats VSVS05_00847 SM00387 Histidine kinase-like ATPases VSVS05_00847 SM00388 His Kinase A (phosphoacceptor) domain VSVS05_00847 SM00448 cheY-homologous receiver domain VSVS05_00859 SM00387 Histidine kinase-like ATPases VSVS05_00859 SM00388 His Kinase A (phosphoacceptor) domain VSVS05_00859 SM00448 cheY-homologous receiver domain VSVS05_00864 SM00387 Histidine kinase-like ATPases VSVS05_00864 SM00388 His Kinase A (phosphoacceptor) domain VSVS05_00865 SM00448 cheY-homologous receiver domain VSVS05_00865 SM00862 Transcriptional regulatory protein, C terminal VSVS05_00874 SM00382 ATPases associated with a variety of cellular activities VSVS05_00876 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. VSVS05_00880 SM00491 VSVS05_00880 VSVS05_00884 SM00729 Elongator protein 3, MiaB family, Radical SAM VSVS05_00884 SM00876 Biotin and Thiamin Synthesis associated domain VSVS05_00904 SM00528 Domain in histone-like proteins of HNS family VSVS05_00915 SM01131 VSVS05_00915 VSVS05_00916 SM00382 ATPases associated with a variety of cellular activities VSVS05_00917 SM00382 ATPases associated with a variety of cellular activities VSVS05_00921 SM00382 ATPases associated with a variety of cellular activities VSVS05_00930 SM00155 Phospholipase D. Active site motifs. VSVS05_00932 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSVS05_00932 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSVS05_00937 SM00382 ATPases associated with a variety of cellular activities VSVS05_00949 SM00387 Histidine kinase-like ATPases VSVS05_00949 SM00448 cheY-homologous receiver domain VSVS05_00950 SM00411 bacterial (prokaryotic) histone like domain VSVS05_00952 SM00841 Elongation factor P, C-terminal VSVS05_00952 SM01185 VSVS05_00952 VSVS05_00954 SM00052 Putative diguanylate phosphodiesterase VSVS05_00955 SM00486 DNA polymerase type-B family VSVS05_00958 SM00421 helix_turn_helix, Lux Regulon VSVS05_00958 SM00448 cheY-homologous receiver domain VSVS05_00959 SM00278 Helix-hairpin-helix DNA-binding motif class 1 VSVS05_00959 SM00465 GIY-YIG type nucleases (URI domain) VSVS05_00966 SM00267 diguanylate cyclase VSVS05_00971 SM00267 diguanylate cyclase VSVS05_00975 SM00873 B3/4 domain VSVS05_00975 SM00874 tRNA synthetase B5 domain VSVS05_00975 SM00896 Ferredoxin-fold anticodon binding domain VSVS05_00982 SM01266 VSVS05_00982 VSVS05_00983 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSVS05_00984 SM00345 helix_turn_helix gluconate operon transcriptional repressor VSVS05_00984 SM00866 VSVS05_00984 VSVS05_00990 SM00450 Rhodanese Homology Domain VSVS05_00992 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSVS05_00994 SM00487 DEAD-like helicases superfamily VSVS05_00994 SM00490 helicase superfamily c-terminal domain VSVS05_01006 SM00671 Sel1-like repeats. VSVS05_01031 SM00363 S4 RNA-binding domain VSVS05_01040 SM00849 Metallo-beta-lactamase superfamily VSVS05_01042 SM00507 HNH nucleases VSVS05_01050 SM00882 Coenzyme A transferase VSVS05_01052 SM00822 VSVS05_01052 VSVS05_01054 SM00271 DnaJ molecular chaperone homology domain VSVS05_01066 SM00926 Molybdopterin oxidoreductase Fe4S4 domain VSVS05_01068 SM00342 helix_turn_helix, arabinose operon control protein VSVS05_01070 SM00342 helix_turn_helix, arabinose operon control protein VSVS05_01070 SM00871 Bacterial transcription activator, effector binding domain VSVS05_01073 SM00342 helix_turn_helix, arabinose operon control protein VSVS05_01074 SM00495 Chitin-binding domain type 3 VSVS05_01079 SM00530 Helix-turn-helix XRE-family like proteins VSVS05_01083 SM00267 diguanylate cyclase VSVS05_01092 SM00450 Rhodanese Homology Domain VSVS05_01097 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSVS05_01097 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSVS05_01098 SM00495 Chitin-binding domain type 3 VSVS05_01098 SM00636 VSVS05_01098 VSVS05_01114 SM00448 cheY-homologous receiver domain VSVS05_01115 SM00387 Histidine kinase-like ATPases VSVS05_01118 SM00729 Elongator protein 3, MiaB family, Radical SAM VSVS05_01119 SM00112 Cadherin repeats. VSVS05_01119 SM00736 Dystroglycan-type cadherin-like domains. VSVS05_01193 SM00671 Sel1-like repeats. VSVS05_01201 SM00062 Bacterial periplasmic substrate-binding proteins VSVS05_01202 SM00382 ATPases associated with a variety of cellular activities VSVS05_01204 SM00347 helix_turn_helix multiple antibiotic resistance protein VSVS05_01210 SM00345 helix_turn_helix gluconate operon transcriptional repressor VSVS05_01210 SM00866 VSVS05_01210 VSVS05_01217 SM00387 Histidine kinase-like ATPases VSVS05_01218 SM00448 cheY-homologous receiver domain VSVS05_01219 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VSVS05_01227 SM00903 Flavin reductase like domain VSVS05_01231 SM00855 Phosphoglycerate mutase family VSVS05_01235 SM00382 ATPases associated with a variety of cellular activities VSVS05_01247 SM00028 Tetratricopeptide repeats VSVS05_01256 SM00062 Bacterial periplasmic substrate-binding proteins VSVS05_01256 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VSVS05_01259 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSVS05_01259 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSVS05_01262 SM00028 Tetratricopeptide repeats VSVS05_01262 SM00267 diguanylate cyclase VSVS05_01269 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase VSVS05_01270 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSVS05_01274 SM00382 ATPases associated with a variety of cellular activities VSVS05_01277 SM00062 Bacterial periplasmic substrate-binding proteins VSVS05_01283 SM00316 Ribosomal protein S1-like RNA-binding domain VSVS05_01288 SM00382 ATPases associated with a variety of cellular activities VSVS05_01290 SM00945 ProQ/FINO family VSVS05_01291 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VSVS05_01291 SM00245 tail specific protease VSVS05_01298 SM00981 VSVS05_01298 VSVS05_01300 SM00382 ATPases associated with a variety of cellular activities VSVS05_01316 SM00100 Cyclic nucleotide-monophosphate binding domain VSVS05_01316 SM00419 helix_turn_helix, cAMP Regulatory protein VSVS05_01322 SM00382 ATPases associated with a variety of cellular activities VSVS05_01333 SM00926 Molybdopterin oxidoreductase Fe4S4 domain VSVS05_01340 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSVS05_01340 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSVS05_01340 SM01358 VSVS05_01340 VSVS05_01341 SM00382 ATPases associated with a variety of cellular activities VSVS05_01345 SM00387 Histidine kinase-like ATPases VSVS05_01345 SM00388 His Kinase A (phosphoacceptor) domain VSVS05_01346 SM00382 ATPases associated with a variety of cellular activities VSVS05_01346 SM00448 cheY-homologous receiver domain VSVS05_01349 SM00382 ATPases associated with a variety of cellular activities VSVS05_01351 SM00852 Probable molybdopterin binding domain VSVS05_01354 SM01144 VSVS05_01354 VSVS05_01356 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSVS05_01356 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSVS05_01371 SM00788 Adenylosuccinate synthetase VSVS05_01379 SM00729 Elongator protein 3, MiaB family, Radical SAM VSVS05_01393 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSVS05_01393 SM00387 Histidine kinase-like ATPases VSVS05_01393 SM00388 His Kinase A (phosphoacceptor) domain VSVS05_01393 SM00448 cheY-homologous receiver domain VSVS05_01394 SM00382 ATPases associated with a variety of cellular activities VSVS05_01394 SM00448 cheY-homologous receiver domain VSVS05_01409 SM00267 diguanylate cyclase VSVS05_01410 SM00360 RNA recognition motif VSVS05_01412 SM00052 Putative diguanylate phosphodiesterase VSVS05_01412 SM00267 diguanylate cyclase VSVS05_01412 SM01049 VSVS05_01412 VSVS05_01414 SM00267 diguanylate cyclase VSVS05_01416 SM00382 ATPases associated with a variety of cellular activities VSVS05_01418 SM00062 Bacterial periplasmic substrate-binding proteins VSVS05_01427 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSVS05_01427 SM00387 Histidine kinase-like ATPases VSVS05_01427 SM00388 His Kinase A (phosphoacceptor) domain VSVS05_01428 SM00448 cheY-homologous receiver domain VSVS05_01428 SM00862 Transcriptional regulatory protein, C terminal VSVS05_01437 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSVS05_01437 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSVS05_01441 SM00434 DNA Topoisomerase IV VSVS05_01447 SM00852 Probable molybdopterin binding domain VSVS05_01450 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSVS05_01450 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSVS05_01450 SM01049 VSVS05_01450 VSVS05_01460 SM00382 ATPases associated with a variety of cellular activities VSVS05_01463 SM00052 Putative diguanylate phosphodiesterase VSVS05_01470 SM00363 S4 RNA-binding domain VSVS05_01471 SM00487 DEAD-like helicases superfamily VSVS05_01471 SM00490 helicase superfamily c-terminal domain VSVS05_01473 SM00448 cheY-homologous receiver domain VSVS05_01473 SM00862 Transcriptional regulatory protein, C terminal VSVS05_01474 SM00387 Histidine kinase-like ATPases VSVS05_01476 SM00342 helix_turn_helix, arabinose operon control protein VSVS05_01483 SM00052 Putative diguanylate phosphodiesterase VSVS05_01483 SM00267 diguanylate cyclase VSVS05_01486 SM00354 helix_turn _helix lactose operon repressor VSVS05_01491 SM00421 helix_turn_helix, Lux Regulon VSVS05_01491 SM00448 cheY-homologous receiver domain VSVS05_01492 SM00387 Histidine kinase-like ATPases VSVS05_01492 SM01049 VSVS05_01492 VSVS05_01498 SM00849 Metallo-beta-lactamase superfamily VSVS05_01511 SM00091 PAS domain VSVS05_01511 SM00382 ATPases associated with a variety of cellular activities VSVS05_01518 SM00387 Histidine kinase-like ATPases VSVS05_01518 SM00388 His Kinase A (phosphoacceptor) domain VSVS05_01518 SM00448 cheY-homologous receiver domain VSVS05_01525 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSVS05_01525 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSVS05_01526 SM00364 Leucine-rich repeats, bacterial type VSVS05_01526 SM00369 Leucine-rich repeats, typical (most populated) subfamily VSVS05_01530 SM00327 von Willebrand factor (vWF) type A domain VSVS05_01534 SM00487 DEAD-like helicases superfamily VSVS05_01534 SM00490 helicase superfamily c-terminal domain VSVS05_01535 SM00919 Malic enzyme, NAD binding domain VSVS05_01535 SM01274 VSVS05_01535 VSVS05_01538 SM00267 diguanylate cyclase VSVS05_01543 SM00382 ATPases associated with a variety of cellular activities VSVS05_01544 SM00382 ATPases associated with a variety of cellular activities VSVS05_01546 SM00344 helix_turn_helix ASNC type VSVS05_01552 SM00422 helix_turn_helix, mercury resistance VSVS05_01553 SM00487 DEAD-like helicases superfamily VSVS05_01553 SM00490 helicase superfamily c-terminal domain VSVS05_01556 SM00062 Bacterial periplasmic substrate-binding proteins VSVS05_01565 SM01154 VSVS05_01565 VSVS05_01574 SM00387 Histidine kinase-like ATPases VSVS05_01574 SM00388 His Kinase A (phosphoacceptor) domain VSVS05_01574 SM00448 cheY-homologous receiver domain VSVS05_01575 SM00448 cheY-homologous receiver domain VSVS05_01575 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VSVS05_01576 SM00062 Bacterial periplasmic substrate-binding proteins VSVS05_01576 SM00091 PAS domain VSVS05_01576 SM00387 Histidine kinase-like ATPases VSVS05_01576 SM00388 His Kinase A (phosphoacceptor) domain VSVS05_01576 SM00448 cheY-homologous receiver domain VSVS05_01577 SM00363 S4 RNA-binding domain VSVS05_01579 SM00481 DNA polymerase alpha chain like domain VSVS05_01589 SM00382 ATPases associated with a variety of cellular activities VSVS05_01589 SM00487 DEAD-like helicases superfamily VSVS05_01589 SM00490 helicase superfamily c-terminal domain VSVS05_01589 SM00847 Helicase associated domain (HA2) Add an annotation VSVS05_01595 SM00479 VSVS05_01595 VSVS05_01596 SM00267 diguanylate cyclase VSVS05_01596 SM01079 VSVS05_01596 VSVS05_01608 SM00382 ATPases associated with a variety of cellular activities VSVS05_01612 SM00387 Histidine kinase-like ATPases VSVS05_01613 SM00448 cheY-homologous receiver domain VSVS05_01613 SM00850 LytTr DNA-binding domain VSVS05_01616 SM00062 Bacterial periplasmic substrate-binding proteins VSVS05_01616 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. VSVS05_01617 SM00382 ATPases associated with a variety of cellular activities VSVS05_01626 SM00763 PrkA AAA domain VSVS05_01632 SM00382 ATPases associated with a variety of cellular activities VSVS05_01633 SM00849 Metallo-beta-lactamase superfamily VSVS05_01638 SM00382 ATPases associated with a variety of cellular activities VSVS05_01641 SM00487 DEAD-like helicases superfamily VSVS05_01641 SM00490 helicase superfamily c-terminal domain VSVS05_01641 SM00982 VSVS05_01641 VSVS05_01641 SM01058 CarD-like/TRCF domain VSVS05_01651 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSVS05_01651 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSVS05_01653 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. VSVS05_01653 SM00382 ATPases associated with a variety of cellular activities VSVS05_01656 SM00345 helix_turn_helix gluconate operon transcriptional repressor VSVS05_01659 SM00843 VSVS05_01659 VSVS05_01660 SM00344 helix_turn_helix ASNC type VSVS05_01661 SM01002 Alanine dehydrogenase/PNT, C-terminal domain VSVS05_01661 SM01003 Alanine dehydrogenase/PNT, N-terminal domain VSVS05_01668 SM00926 Molybdopterin oxidoreductase Fe4S4 domain VSVS05_01682 SM00382 ATPases associated with a variety of cellular activities VSVS05_01683 SM00382 ATPases associated with a variety of cellular activities VSVS05_01689 SM00062 Bacterial periplasmic substrate-binding proteins VSVS05_01689 SM00387 Histidine kinase-like ATPases VSVS05_01689 SM00388 His Kinase A (phosphoacceptor) domain VSVS05_01689 SM00448 cheY-homologous receiver domain VSVS05_01690 SM00052 Putative diguanylate phosphodiesterase VSVS05_01690 SM00421 helix_turn_helix, Lux Regulon VSVS05_01690 SM00448 cheY-homologous receiver domain VSVS05_01691 SM00448 cheY-homologous receiver domain VSVS05_01694 SM01276 VSVS05_01694 VSVS05_01696 SM00062 Bacterial periplasmic substrate-binding proteins VSVS05_01696 SM00267 diguanylate cyclase VSVS05_01701 SM00344 helix_turn_helix ASNC type VSVS05_01704 SM00978 VSVS05_01704 VSVS05_01706 SM00563 Phosphate acyltransferases VSVS05_01712 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain VSVS05_01718 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VSVS05_01719 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VSVS05_01720 SM01144 VSVS05_01720 VSVS05_01722 SM00420 helix_turn_helix, Deoxyribose operon repressor VSVS05_01722 SM01134 VSVS05_01722 VSVS05_01725 SM00357 Cold shock protein domain VSVS05_01726 SM00420 helix_turn_helix, Deoxyribose operon repressor VSVS05_01726 SM01134 VSVS05_01726 VSVS05_01739 SM00481 DNA polymerase alpha chain like domain VSVS05_01740 SM00260 Two component signalling adaptor domain VSVS05_01740 SM00448 cheY-homologous receiver domain VSVS05_01756 SM00825 Beta-ketoacyl synthase VSVS05_01758 SM00822 VSVS05_01758 VSVS05_01759 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. VSVS05_01765 SM00363 S4 RNA-binding domain VSVS05_01766 SM00316 Ribosomal protein S1-like RNA-binding domain VSVS05_01768 SM00155 Phospholipase D. Active site motifs. VSVS05_01770 SM00474 3'-5' exonuclease VSVS05_01776 SM00487 DEAD-like helicases superfamily VSVS05_01776 SM00491 VSVS05_01776 VSVS05_01782 SM00870 VSVS05_01782 VSVS05_01784 SM01266 VSVS05_01784 VSVS05_01787 SM00382 ATPases associated with a variety of cellular activities VSVS05_01792 SM00382 ATPases associated with a variety of cellular activities VSVS05_01798 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family VSVS05_01799 SM00028 Tetratricopeptide repeats VSVS05_01801 SM00411 bacterial (prokaryotic) histone like domain VSVS05_01802 SM00316 Ribosomal protein S1-like RNA-binding domain VSVS05_01806 SM00411 bacterial (prokaryotic) histone like domain VSVS05_01807 SM00382 ATPases associated with a variety of cellular activities VSVS05_01807 SM00464 Found in ATP-dependent protease La (LON) VSVS05_01808 SM00382 ATPases associated with a variety of cellular activities VSVS05_01808 SM00994 ClpX C4-type zinc finger VSVS05_01808 SM01086 C-terminal, D2-small domain, of ClpB protein VSVS05_01811 SM00387 Histidine kinase-like ATPases VSVS05_01811 SM00388 His Kinase A (phosphoacceptor) domain VSVS05_01812 SM00382 ATPases associated with a variety of cellular activities VSVS05_01812 SM00448 cheY-homologous receiver domain VSVS05_01816 SM00729 Elongator protein 3, MiaB family, Radical SAM VSVS05_01823 SM00382 ATPases associated with a variety of cellular activities VSVS05_01842 SM00346 helix_turn_helix isocitrate lyase regulation VSVS05_01850 SM00420 helix_turn_helix, Deoxyribose operon repressor VSVS05_01850 SM01134 VSVS05_01850 VSVS05_01865 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VSVS05_01867 SM00411 bacterial (prokaryotic) histone like domain VSVS05_01872 SM00857 Resolvase, N terminal domain VSVS05_01875 SM00974 VSVS05_01875 VSVS05_01876 SM00487 DEAD-like helicases superfamily VSVS05_01898 SM00345 helix_turn_helix gluconate operon transcriptional repressor VSVS05_01898 SM00895 VSVS05_01898 VSVS05_01899 SM00859 Semialdehyde dehydrogenase, NAD binding domain VSVS05_01902 SM00073 Histidine Phosphotransfer domain VSVS05_01917 SM00861 Transketolase, pyrimidine binding domain VSVS05_01918 SM00345 helix_turn_helix gluconate operon transcriptional repressor VSVS05_01918 SM00866 VSVS05_01918 VSVS05_01922 SM00267 diguanylate cyclase VSVS05_01925 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain VSVS05_01925 SM00437 Bacterial DNA topoisomerase I DNA-binding domain VSVS05_01925 SM00493 VSVS05_01925 VSVS05_01930 SM00226 Low molecular weight phosphatase family VSVS05_01932 SM00382 ATPases associated with a variety of cellular activities VSVS05_01948 SM00116 Domain in cystathionine beta-synthase and other proteins. VSVS05_01952 SM00852 Probable molybdopterin binding domain VSVS05_01953 SM00729 Elongator protein 3, MiaB family, Radical SAM VSVS05_01956 SM00382 ATPases associated with a variety of cellular activities VSVS05_01956 SM00448 cheY-homologous receiver domain VSVS05_01957 SM00487 DEAD-like helicases superfamily VSVS05_01957 SM00490 helicase superfamily c-terminal domain VSVS05_01964 SM00900 VSVS05_01964 VSVS05_01966 SM00478 endonuclease III VSVS05_01966 SM00525 VSVS05_01966 VSVS05_01971 SM00479 VSVS05_01971 VSVS05_01974 SM01130 VSVS05_01974 VSVS05_01977 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSVS05_01977 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSVS05_01980 SM00028 Tetratricopeptide repeats VSVS05_01992 SM00937 VSVS05_01992 VSVS05_01996 SM01400 VSVS05_01996 VSVS05_02019 SM00047 Lysozyme subfamily 2 VSVS05_02028 SM00138 Methyltransferase, chemotaxis proteins VSVS05_02029 SM00260 Two component signalling adaptor domain VSVS05_02029 SM00448 cheY-homologous receiver domain VSVS05_02030 SM00858 VSVS05_02030 VSVS05_02047 SM00387 Histidine kinase-like ATPases VSVS05_02048 SM00862 Transcriptional regulatory protein, C terminal VSVS05_02053 SM00116 Domain in cystathionine beta-synthase and other proteins. VSVS05_02054 SM00938 Nitrogen regulatory protein P-II VSVS05_02060 SM00244 prohibitin homologues VSVS05_02065 SM00278 Helix-hairpin-helix DNA-binding motif class 1 VSVS05_02065 SM00292 breast cancer carboxy-terminal domain VSVS05_02065 SM00532 Ligase N family VSVS05_02066 SM00771 ZipA, C-terminal domain (FtsZ-binding) VSVS05_02074 SM00729 Elongator protein 3, MiaB family, Radical SAM VSVS05_02077 SM00116 Domain in cystathionine beta-synthase and other proteins. VSVS05_02077 SM01091 Transporter associated domain VSVS05_02088 SM00936 Penicillin-binding protein 5, C-terminal domain VSVS05_02091 SM00729 Elongator protein 3, MiaB family, Radical SAM VSVS05_02095 SM00642 Alpha-amylase domain VSVS05_02097 SM00354 helix_turn _helix lactose operon repressor VSVS05_02100 SM00382 ATPases associated with a variety of cellular activities VSVS05_02100 SM00930 VSVS05_02100 VSVS05_02112 SM00479 VSVS05_02112 VSVS05_02115 SM00849 Metallo-beta-lactamase superfamily VSVS05_02116 SM00257 Lysin motif VSVS05_02119 SM00938 Nitrogen regulatory protein P-II VSVS05_02120 SM00977 TilS substrate C-terminal domain VSVS05_02122 SM00481 DNA polymerase alpha chain like domain VSVS05_02128 SM00935 Outer membrane protein (OmpH-like) VSVS05_02130 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. VSVS05_02139 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VSVS05_02150 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase VSVS05_02164 SM00267 diguanylate cyclase VSVS05_02164 SM00448 cheY-homologous receiver domain VSVS05_02170 SM00900 VSVS05_02170 VSVS05_02180 SM00464 Found in ATP-dependent protease La (LON) VSVS05_02185 SM00562 VSVS05_02185 VSVS05_02190 SM00271 DnaJ molecular chaperone homology domain VSVS05_02205 SM00382 ATPases associated with a variety of cellular activities VSVS05_02205 SM01086 C-terminal, D2-small domain, of ClpB protein VSVS05_02207 SM00363 S4 RNA-binding domain VSVS05_02209 SM00062 Bacterial periplasmic substrate-binding proteins VSVS05_02211 SM00830 Chorismate mutase type II VSVS05_02214 SM00052 Putative diguanylate phosphodiesterase VSVS05_02214 SM00267 diguanylate cyclase VSVS05_02218 SM00382 ATPases associated with a variety of cellular activities VSVS05_02221 SM00830 Chorismate mutase type II VSVS05_02224 SM00448 cheY-homologous receiver domain VSVS05_02224 SM00850 LytTr DNA-binding domain VSVS05_02234 SM00904 Riboflavin kinase VSVS05_02237 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor VSVS05_02243 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. VSVS05_02245 SM00927 DNA mismatch repair enzyme MutH VSVS05_02251 SM00073 Histidine Phosphotransfer domain VSVS05_02251 SM00091 PAS domain VSVS05_02251 SM00387 Histidine kinase-like ATPases VSVS05_02251 SM00388 His Kinase A (phosphoacceptor) domain VSVS05_02251 SM00448 cheY-homologous receiver domain VSVS05_02252 SM00091 PAS domain VSVS05_02252 SM00267 diguanylate cyclase VSVS05_02253 SM00729 Elongator protein 3, MiaB family, Radical SAM VSVS05_02263 SM00316 Ribosomal protein S1-like RNA-binding domain VSVS05_02263 SM00322 K homology RNA-binding domain VSVS05_02270 SM00382 ATPases associated with a variety of cellular activities VSVS05_02272 SM01103 VSVS05_02272 VSVS05_02287 SM00091 PAS domain VSVS05_02287 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSVS05_02287 SM00387 Histidine kinase-like ATPases VSVS05_02287 SM00388 His Kinase A (phosphoacceptor) domain VSVS05_02287 SM00448 cheY-homologous receiver domain VSVS05_02291 SM00382 ATPases associated with a variety of cellular activities VSVS05_02292 SM00382 ATPases associated with a variety of cellular activities VSVS05_02296 SM01068 Putative carbohydrate binding domain VSVS05_02300 SM00382 ATPases associated with a variety of cellular activities VSVS05_02304 SM00938 Nitrogen regulatory protein P-II VSVS05_02312 SM00487 DEAD-like helicases superfamily VSVS05_02312 SM00490 helicase superfamily c-terminal domain VSVS05_02312 SM00847 Helicase associated domain (HA2) Add an annotation VSVS05_02321 SM00382 ATPases associated with a variety of cellular activities VSVS05_02323 SM00947 Carbonic anhydrase VSVS05_02329 SM00345 helix_turn_helix gluconate operon transcriptional repressor VSVS05_02329 SM00895 VSVS05_02329 VSVS05_02334 SM00644 VSVS05_02334 VSVS05_02344 SM00487 DEAD-like helicases superfamily VSVS05_02344 SM00490 helicase superfamily c-terminal domain VSVS05_02345 SM00670 Large family of predicted nucleotide-binding domains VSVS05_02350 SM00271 DnaJ molecular chaperone homology domain VSVS05_02354 SM00650 Ribosomal RNA adenine dimethylases VSVS05_02382 SM00316 Ribosomal protein S1-like RNA-binding domain VSVS05_02398 SM00382 ATPases associated with a variety of cellular activities VSVS05_02399 SM00028 Tetratricopeptide repeats VSVS05_02401 SM00965 Secretin and TonB N terminus short domain VSVS05_02405 SM00052 Putative diguanylate phosphodiesterase VSVS05_02405 SM00267 diguanylate cyclase VSVS05_02407 SM00421 helix_turn_helix, Lux Regulon VSVS05_02414 SM00382 ATPases associated with a variety of cellular activities VSVS05_02418 SM01152 VSVS05_02418 VSVS05_02421 SM00729 Elongator protein 3, MiaB family, Radical SAM VSVS05_02424 SM00478 endonuclease III VSVS05_02424 SM00525 VSVS05_02424 VSVS05_02431 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSVS05_02431 SM01049 VSVS05_02431 VSVS05_02438 SM00563 Phosphate acyltransferases VSVS05_02445 SM00382 ATPases associated with a variety of cellular activities VSVS05_02447 SM00116 Domain in cystathionine beta-synthase and other proteins. VSVS05_02451 SM00382 ATPases associated with a variety of cellular activities VSVS05_02457 SM00924 MgtE intracellular N domain VSVS05_02458 SM01018 B12 binding domain VSVS05_02493 SM00662 RNA polymerases D VSVS05_02494 SM00363 S4 RNA-binding domain VSVS05_02494 SM01390 VSVS05_02494 VSVS05_02507 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. VSVS05_02508 SM01374 VSVS05_02508 VSVS05_02512 SM00322 K homology RNA-binding domain VSVS05_02515 SM01382 VSVS05_02515 VSVS05_02515 SM01383 VSVS05_02515 VSVS05_02519 SM01403 VSVS05_02519 VSVS05_02520 SM00967 RNA 2'-O ribose methyltransferase substrate binding VSVS05_02521 SM00316 Ribosomal protein S1-like RNA-binding domain VSVS05_02521 SM00357 Cold shock protein domain VSVS05_02521 SM00955 VSVS05_02521 VSVS05_02523 SM00671 Sel1-like repeats. VSVS05_02524 SM00788 Adenylosuccinate synthetase VSVS05_02530 SM00382 ATPases associated with a variety of cellular activities VSVS05_02536 SM00100 Cyclic nucleotide-monophosphate binding domain VSVS05_02536 SM00419 helix_turn_helix, cAMP Regulatory protein VSVS05_02537 SM01150 VSVS05_02537 VSVS05_02550 SM00965 Secretin and TonB N terminus short domain VSVS05_02562 SM00859 Semialdehyde dehydrogenase, NAD binding domain VSVS05_02566 SM00971 Serine acetyltransferase, N-terminal VSVS05_02569 SM00450 Rhodanese Homology Domain VSVS05_02577 SM00382 ATPases associated with a variety of cellular activities VSVS05_02577 SM01086 C-terminal, D2-small domain, of ClpB protein VSVS05_02609 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. VSVS05_02611 SM00354 helix_turn _helix lactose operon repressor VSVS05_02612 SM00487 DEAD-like helicases superfamily VSVS05_02612 SM00490 helicase superfamily c-terminal domain VSVS05_02614 SM00919 Malic enzyme, NAD binding domain VSVS05_02614 SM01274 VSVS05_02614 VSVS05_02622 SM00267 diguanylate cyclase VSVS05_02624 SM00883 Chaperonin 10 Kd subunit VSVS05_02630 SM00155 Phospholipase D. Active site motifs. VSVS05_02646 SM00116 Domain in cystathionine beta-synthase and other proteins. VSVS05_02675 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain VSVS05_02675 SM01232 VSVS05_02675 VSVS05_02680 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSVS05_02680 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSVS05_02680 SM01049 VSVS05_02680 VSVS05_02691 SM00072 Guanylate kinase homologues. VSVS05_02692 SM01409 VSVS05_02692 VSVS05_02693 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VSVS05_02694 SM00954 Region found in RelA / SpoT proteins VSVS05_02696 SM00487 DEAD-like helicases superfamily VSVS05_02696 SM00490 helicase superfamily c-terminal domain VSVS05_02697 SM01081 Putative carbohydrate binding domain VSVS05_02704 SM00316 Ribosomal protein S1-like RNA-binding domain VSVS05_02704 SM00732 Likely ribonuclease with RNase H fold. VSVS05_02706 SM00448 cheY-homologous receiver domain VSVS05_02706 SM00862 Transcriptional regulatory protein, C terminal VSVS05_02707 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSVS05_02707 SM00387 Histidine kinase-like ATPases VSVS05_02707 SM00388 His Kinase A (phosphoacceptor) domain VSVS05_02718 SM00382 ATPases associated with a variety of cellular activities VSVS05_02721 SM00363 S4 RNA-binding domain VSVS05_02731 SM01230 VSVS05_02731 VSVS05_02732 SM00091 PAS domain VSVS05_02732 SM00387 Histidine kinase-like ATPases VSVS05_02732 SM00388 His Kinase A (phosphoacceptor) domain VSVS05_02733 SM00382 ATPases associated with a variety of cellular activities VSVS05_02733 SM00448 cheY-homologous receiver domain VSVS05_02734 SM00052 Putative diguanylate phosphodiesterase VSVS05_02734 SM00267 diguanylate cyclase VSVS05_02734 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSVS05_02748 SM01001 AIR carboxylase VSVS05_02766 SM00382 ATPases associated with a variety of cellular activities VSVS05_02772 SM00829 Enoylreductase VSVS05_02781 SM00387 Histidine kinase-like ATPases VSVS05_02781 SM00433 TopoisomeraseII VSVS05_02784 SM00480 DNA polymerase III beta subunit VSVS05_02785 SM00382 ATPases associated with a variety of cellular activities VSVS05_02785 SM00760 Bacterial dnaA protein helix-turn-helix domain VSVS05_02786 SM00062 Bacterial periplasmic substrate-binding proteins VSVS05_02786 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. VSVS05_02788 SM00382 ATPases associated with a variety of cellular activities VSVS05_02791 SM01234 VSVS05_02791 VSVS05_02795 SM01228 VSVS05_02795 VSVS05_02797 SM00470 ParB-like nuclease domain VSVS05_02805 SM00382 ATPases associated with a variety of cellular activities VSVS05_02834 SM00876 Biotin and Thiamin Synthesis associated domain VSVS05_02839 SM00344 helix_turn_helix ASNC type VSVS05_02840 SM00052 Putative diguanylate phosphodiesterase VSVS05_02840 SM00091 PAS domain VSVS05_02840 SM00267 diguanylate cyclase VSVS05_02847 SM00354 helix_turn _helix lactose operon repressor VSVS05_02861 SM01004 Delta-aminolevulinic acid dehydratase VSVS05_02862 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs VSVS05_02862 SM00474 3'-5' exonuclease VSVS05_02862 SM00475 5'-3' exonuclease VSVS05_02862 SM00482 DNA polymerase A domain VSVS05_02868 SM00729 Elongator protein 3, MiaB family, Radical SAM VSVS05_02882 SM00382 ATPases associated with a variety of cellular activities VSVS05_02893 SM00220 Serine/Threonine protein kinases, catalytic domain VSVS05_02894 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSVS05_02894 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSVS05_02909 SM00342 helix_turn_helix, arabinose operon control protein VSVS05_02911 SM00341 Helicase and RNase D C-terminal VSVS05_02911 SM00487 DEAD-like helicases superfamily VSVS05_02911 SM00490 helicase superfamily c-terminal domain VSVS05_02911 SM00956 VSVS05_02911 VSVS05_02915 SM00487 DEAD-like helicases superfamily VSVS05_02915 SM00490 helicase superfamily c-terminal domain VSVS05_02917 SM00357 Cold shock protein domain VSVS05_02917 SM00382 ATPases associated with a variety of cellular activities VSVS05_02917 SM00959 Rho termination factor, N-terminal domain VSVS05_02934 SM01219 VSVS05_02934 VSVS05_02940 SM01144 VSVS05_02940 VSVS05_02946 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor VSVS05_02947 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VSVS05_02958 SM00382 ATPases associated with a variety of cellular activities VSVS05_02958 SM00962 SRP54-type protein, GTPase domain VSVS05_02958 SM00963 SRP54-type protein, helical bundle domain VSVS05_02959 SM00382 ATPases associated with a variety of cellular activities VSVS05_02962 SM00450 Rhodanese Homology Domain VSVS05_02967 SM00563 Phosphate acyltransferases VSVS05_02979 SM00360 RNA recognition motif VSVS05_02982 SM00387 Histidine kinase-like ATPases VSVS05_02982 SM00388 His Kinase A (phosphoacceptor) domain VSVS05_02982 SM00448 cheY-homologous receiver domain VSVS05_02990 SM00342 helix_turn_helix, arabinose operon control protein VSVS05_02991 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSVS05_02991 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSVS05_02994 SM00642 Alpha-amylase domain VSVS05_03000 SM00448 cheY-homologous receiver domain VSVS05_03003 SM01240 VSVS05_03003 VSVS05_03005 SM00382 ATPases associated with a variety of cellular activities VSVS05_03009 SM00091 PAS domain VSVS05_03009 SM00387 Histidine kinase-like ATPases VSVS05_03010 SM00448 cheY-homologous receiver domain VSVS05_03016 SM00822 VSVS05_03016 VSVS05_03019 SM00100 Cyclic nucleotide-monophosphate binding domain VSVS05_03019 SM00116 Domain in cystathionine beta-synthase and other proteins. VSVS05_03020 SM00479 VSVS05_03020 VSVS05_03025 SM00382 ATPases associated with a variety of cellular activities VSVS05_03030 SM00331 Sigma factor PP2C-like phosphatases VSVS05_03030 SM00448 cheY-homologous receiver domain VSVS05_03042 SM00448 cheY-homologous receiver domain VSVS05_03065 SM00267 diguanylate cyclase VSVS05_03066 SM00260 Two component signalling adaptor domain VSVS05_03066 SM00448 cheY-homologous receiver domain VSVS05_03072 SM00382 ATPases associated with a variety of cellular activities VSVS05_03073 SM00327 von Willebrand factor (vWF) type A domain VSVS05_03075 SM00347 helix_turn_helix multiple antibiotic resistance protein VSVS05_03083 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSVS05_03094 SM00387 Histidine kinase-like ATPases VSVS05_03094 SM00448 cheY-homologous receiver domain VSVS05_03104 SM01007 Class II Aldolase and Adducin N-terminal domain VSVS05_03105 SM00812 Alpha-L-fucosidase VSVS05_03112 SM00420 helix_turn_helix, Deoxyribose operon repressor VSVS05_03112 SM01134 VSVS05_03112 VSVS05_03126 SM00267 diguanylate cyclase VSVS05_03144 SM00507 HNH nucleases VSVS05_03147 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSVS05_03149 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSVS05_03150 SM00260 Two component signalling adaptor domain VSVS05_03150 SM00448 cheY-homologous receiver domain VSVS05_03152 SM00091 PAS domain VSVS05_03152 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSVS05_03153 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSVS05_03160 SM00487 DEAD-like helicases superfamily VSVS05_03172 SM00062 Bacterial periplasmic substrate-binding proteins VSVS05_03172 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VSVS05_03173 SM00267 diguanylate cyclase VSVS05_03173 SM01079 VSVS05_03173 VSVS05_03174 SM00342 helix_turn_helix, arabinose operon control protein VSVS05_03175 SM00052 Putative diguanylate phosphodiesterase VSVS05_03175 SM00267 diguanylate cyclase VSVS05_03182 SM00345 helix_turn_helix gluconate operon transcriptional repressor VSVS05_03182 SM00895 VSVS05_03182 VSVS05_03195 SM00382 ATPases associated with a variety of cellular activities VSVS05_03208 SM00871 Bacterial transcription activator, effector binding domain VSVS05_03209 SM00901 VSVS05_03209 VSVS05_03213 SM01022 VSVS05_03213 VSVS05_03249 SM00507 HNH nucleases VSVS05_03252 SM00871 Bacterial transcription activator, effector binding domain VSVS05_03267 SM01022 VSVS05_03267 VSVS05_03271 SM01034 Sensors of blue-light using FAD VSVS05_03279 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VSVS05_03292 SM00382 ATPases associated with a variety of cellular activities VSVS05_03293 SM00052 Putative diguanylate phosphodiesterase VSVS05_03293 SM00267 diguanylate cyclase VSVS05_03298 SM00382 ATPases associated with a variety of cellular activities VSVS05_03299 SM00422 helix_turn_helix, mercury resistance VSVS05_03300 SM00342 helix_turn_helix, arabinose operon control protein VSVS05_03304 SM00487 DEAD-like helicases superfamily VSVS05_03304 SM00490 helicase superfamily c-terminal domain VSVS05_03307 SM00487 DEAD-like helicases superfamily VSVS05_03307 SM00490 helicase superfamily c-terminal domain VSVS05_03313 SM00487 DEAD-like helicases superfamily VSVS05_03313 SM00490 helicase superfamily c-terminal domain VSVS05_03318 SM00244 prohibitin homologues VSVS05_03320 SM00052 Putative diguanylate phosphodiesterase VSVS05_03320 SM00091 PAS domain VSVS05_03320 SM00267 diguanylate cyclase VSVS05_03321 SM00671 Sel1-like repeats. VSVS05_03334 SM00387 Histidine kinase-like ATPases VSVS05_03334 SM00388 His Kinase A (phosphoacceptor) domain VSVS05_03334 SM00448 cheY-homologous receiver domain VSVS05_03340 SM00926 Molybdopterin oxidoreductase Fe4S4 domain VSVS05_03343 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSVS05_03343 SM00387 Histidine kinase-like ATPases VSVS05_03344 SM00421 helix_turn_helix, Lux Regulon VSVS05_03344 SM00448 cheY-homologous receiver domain VSVS05_03346 SM00052 Putative diguanylate phosphodiesterase VSVS05_03350 SM00867 YceI-like domain VSVS05_03359 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSVS05_03360 SM00782 PhnA Zinc-Ribbon VSVS05_03368 SM00881 CoA binding domain VSVS05_03379 SM00448 cheY-homologous receiver domain VSVS05_03379 SM00862 Transcriptional regulatory protein, C terminal VSVS05_03380 SM00387 Histidine kinase-like ATPases VSVS05_03380 SM00388 His Kinase A (phosphoacceptor) domain VSVS05_03383 SM01002 Alanine dehydrogenase/PNT, C-terminal domain VSVS05_03383 SM01003 Alanine dehydrogenase/PNT, N-terminal domain VSVS05_03386 SM00267 diguanylate cyclase VSVS05_03388 SM00267 diguanylate cyclase VSVS05_03388 SM00448 cheY-homologous receiver domain VSVS05_03390 SM00382 ATPases associated with a variety of cellular activities VSVS05_03396 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSVS05_03396 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSVS05_03397 SM00354 helix_turn _helix lactose operon repressor VSVS05_03406 SM00073 Histidine Phosphotransfer domain VSVS05_03406 SM00387 Histidine kinase-like ATPases VSVS05_03406 SM00388 His Kinase A (phosphoacceptor) domain VSVS05_03406 SM00448 cheY-homologous receiver domain VSVS05_03408 SM00851 MGS-like domain VSVS05_03414 SM00387 Histidine kinase-like ATPases VSVS05_03414 SM00388 His Kinase A (phosphoacceptor) domain VSVS05_03414 SM00448 cheY-homologous receiver domain VSVS05_03438 SM00822 VSVS05_03438 VSVS05_03440 SM00487 DEAD-like helicases superfamily VSVS05_03440 SM00490 helicase superfamily c-terminal domain VSVS05_03444 SM00100 Cyclic nucleotide-monophosphate binding domain VSVS05_03444 SM00116 Domain in cystathionine beta-synthase and other proteins. VSVS05_03445 SM00479 VSVS05_03445 VSVS05_03447 SM00347 helix_turn_helix multiple antibiotic resistance protein VSVS05_03450 SM00342 helix_turn_helix, arabinose operon control protein VSVS05_03457 SM00382 ATPases associated with a variety of cellular activities VSVS05_03458 SM00327 von Willebrand factor (vWF) type A domain VSVS05_03473 SM00487 DEAD-like helicases superfamily VSVS05_03473 SM00490 helicase superfamily c-terminal domain VSVS05_03475 SM00852 Probable molybdopterin binding domain VSVS05_03478 SM00450 Rhodanese Homology Domain VSVS05_03479 SM00636 VSVS05_03479 VSVS05_03482 SM00861 Transketolase, pyrimidine binding domain VSVS05_03485 SM00796 Allophanate hydrolase subunit 1 VSVS05_03486 SM00797 Allophanate hydrolase subunit 2 VSVS05_03489 SM00382 ATPases associated with a variety of cellular activities VSVS05_03492 SM00052 Putative diguanylate phosphodiesterase VSVS05_03492 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. VSVS05_03492 SM00267 diguanylate cyclase VSVS05_03494 SM00271 DnaJ molecular chaperone homology domain VSVS05_03499 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VSVS05_03504 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSVS05_03505 SM00506 Appr-1"-p processing enzyme VSVS05_03506 SM00862 Transcriptional regulatory protein, C terminal VSVS05_03508 SM00862 Transcriptional regulatory protein, C terminal VSVS05_03510 SM00028 Tetratricopeptide repeats VSVS05_03522 SM00062 Bacterial periplasmic substrate-binding proteins VSVS05_03522 SM00267 diguanylate cyclase VSVS05_03527 SM00448 cheY-homologous receiver domain VSVS05_03527 SM00862 Transcriptional regulatory protein, C terminal VSVS05_03528 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSVS05_03528 SM00387 Histidine kinase-like ATPases VSVS05_03528 SM00388 His Kinase A (phosphoacceptor) domain VSVS05_03535 SM00448 cheY-homologous receiver domain VSVS05_03536 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSVS05_03536 SM00387 Histidine kinase-like ATPases VSVS05_03536 SM00388 His Kinase A (phosphoacceptor) domain VSVS05_03546 SM01350 VSVS05_03546 VSVS05_03553 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor VSVS05_03555 SM00052 Putative diguanylate phosphodiesterase VSVS05_03560 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSVS05_03560 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSVS05_03569 SM00829 Enoylreductase VSVS05_03577 SM00267 diguanylate cyclase VSVS05_03578 SM00226 Low molecular weight phosphatase family VSVS05_03588 SM00984 UDP binding domain VSVS05_03593 SM00382 ATPases associated with a variety of cellular activities VSVS05_03601 SM00342 helix_turn_helix, arabinose operon control protein VSVS05_03605 SM00342 helix_turn_helix, arabinose operon control protein VSVS05_03616 SM00327 von Willebrand factor (vWF) type A domain VSVS05_03617 SM00028 Tetratricopeptide repeats VSVS05_03620 SM00267 diguanylate cyclase VSVS05_03626 SM00344 helix_turn_helix ASNC type VSVS05_03628 SM00342 helix_turn_helix, arabinose operon control protein VSVS05_03634 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. VSVS05_03634 SM00267 diguanylate cyclase VSVS05_03645 SM00420 helix_turn_helix, Deoxyribose operon repressor VSVS05_03645 SM01134 VSVS05_03645 VSVS05_03652 SM01120 VSVS05_03652 VSVS05_03662 SM00354 helix_turn _helix lactose operon repressor VSVS05_03663 SM00640 Glycosyl hydrolases family 32 VSVS05_03666 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSVS05_03666 SM00387 Histidine kinase-like ATPases VSVS05_03666 SM00388 His Kinase A (phosphoacceptor) domain VSVS05_03666 SM00448 cheY-homologous receiver domain VSVS05_03695 SM00052 Putative diguanylate phosphodiesterase VSVS05_03714 SM00342 helix_turn_helix, arabinose operon control protein VSVS05_03721 SM00345 helix_turn_helix gluconate operon transcriptional repressor VSVS05_03722 SM00357 Cold shock protein domain VSVS05_03728 SM00028 Tetratricopeptide repeats VSVS05_03728 SM00267 diguanylate cyclase VSVS05_03729 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSVS05_03731 SM01321 VSVS05_03731 VSVS05_03735 SM00936 Penicillin-binding protein 5, C-terminal domain VSVS05_03737 SM00357 Cold shock protein domain VSVS05_03738 SM01322 VSVS05_03738 VSVS05_03741 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. VSVS05_03741 SM00382 ATPases associated with a variety of cellular activities VSVS05_03753 SM00052 Putative diguanylate phosphodiesterase VSVS05_03753 SM00267 diguanylate cyclase VSVS05_03757 SM00421 helix_turn_helix, Lux Regulon VSVS05_03758 SM00020 Trypsin-like serine protease VSVS05_03760 SM00530 Helix-turn-helix XRE-family like proteins VSVS05_03770 SM00267 diguanylate cyclase VSVS05_03776 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain VSVS05_03777 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSVS05_03777 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSVS05_03779 SM00344 helix_turn_helix ASNC type VSVS05_03783 SM00829 Enoylreductase VSVS05_03788 SM01266 VSVS05_03788 VSVS05_03791 SM01022 VSVS05_03791 VSVS05_03793 SM00382 ATPases associated with a variety of cellular activities VSVS05_03797 SM00422 helix_turn_helix, mercury resistance VSVS05_03798 SM00448 cheY-homologous receiver domain VSVS05_03798 SM00862 Transcriptional regulatory protein, C terminal VSVS05_03799 SM00387 Histidine kinase-like ATPases VSVS05_03803 SM00642 Alpha-amylase domain VSVS05_03804 SM00267 diguanylate cyclase VSVS05_03810 SM00450 Rhodanese Homology Domain VSVS05_03811 SM00342 helix_turn_helix, arabinose operon control protein VSVS05_03816 SM00642 Alpha-amylase domain VSVS05_03817 SM00090 RIO-like kinase VSVS05_03830 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. VSVS05_03830 SM00267 diguanylate cyclase VSVS05_03833 SM00382 ATPases associated with a variety of cellular activities VSVS05_03835 SM00342 helix_turn_helix, arabinose operon control protein VSVS05_03836 SM00028 Tetratricopeptide repeats VSVS05_03839 SM00900 VSVS05_03839 VSVS05_03841 SM00342 helix_turn_helix, arabinose operon control protein VSVS05_03849 SM00900 VSVS05_03849 VSVS05_03854 SM00345 helix_turn_helix gluconate operon transcriptional repressor VSVS05_03854 SM00866 VSVS05_03854 VSVS05_03859 SM00382 ATPases associated with a variety of cellular activities VSVS05_03863 SM00342 helix_turn_helix, arabinose operon control protein VSVS05_03863 SM00871 Bacterial transcription activator, effector binding domain VSVS05_03868 SM00267 diguanylate cyclase VSVS05_03868 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSVS05_03882 SM00487 DEAD-like helicases superfamily VSVS05_03882 SM00490 helicase superfamily c-terminal domain VSVS05_03892 SM00382 ATPases associated with a variety of cellular activities VSVS05_03896 SM00369 Leucine-rich repeats, typical (most populated) subfamily VSVS05_03906 SM00642 Alpha-amylase domain VSVS05_03907 SM00872 Alpha mannosidase, middle domain VSVS05_03924 SM00422 helix_turn_helix, mercury resistance VSVS05_03930 SM00479 VSVS05_03930 VSVS05_03931 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSVS05_03931 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSVS05_03933 SM00530 Helix-turn-helix XRE-family like proteins VSVS05_03936 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSVS05_03936 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSVS05_03938 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor VSVS05_03945 SM00354 helix_turn _helix lactose operon repressor VSVS05_03953 SM00014 Acid phosphatase homologues VSVS05_03973 SM00563 Phosphate acyltransferases VSVS05_03991 SM00857 Resolvase, N terminal domain VSVS05_03993 SM00331 Sigma factor PP2C-like phosphatases VSVS05_03993 SM00448 cheY-homologous receiver domain VSVS05_03996 SM00470 ParB-like nuclease domain VSVS05_04000 SM00382 ATPases associated with a variety of cellular activities VSVS05_04001 SM00382 ATPases associated with a variety of cellular activities VSVS05_04012 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). VSVS05_04012 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain VSVS05_04012 SM01049 VSVS05_04012 VSVS05_04015 SM00421 helix_turn_helix, Lux Regulon VSVS05_04021 SM00420 helix_turn_helix, Deoxyribose operon repressor VSVS05_04021 SM01134 VSVS05_04021 VSVS05_04027 SM00861 Transketolase, pyrimidine binding domain VSVS05_04034 SM01060 VSVS05_04034 VSVS05_04037 SM01321 VSVS05_04037 VSVS05_04045 SM01130 VSVS05_04045 VSVS05_04052 SM00345 helix_turn_helix gluconate operon transcriptional repressor VSVS05_04052 SM00895 VSVS05_04052 VSVS05_04058 SM01022 VSVS05_04058 VSVS05_04059 SM00671 Sel1-like repeats. VSVS05_04065 SM01059 Chloramphenicol acetyltransferase VSVS05_04073 SM00481 DNA polymerase alpha chain like domain VSVS05_04078 SM00422 helix_turn_helix, mercury resistance VSVS05_04083 SM00382 ATPases associated with a variety of cellular activities VSVS05_04099 SM00495 Chitin-binding domain type 3 VSVS05_04100 SM00028 Tetratricopeptide repeats VSVS05_04102 SM00421 helix_turn_helix, Lux Regulon VSVS05_04105 SM00642 Alpha-amylase domain VSVS05_04118 SM00342 helix_turn_helix, arabinose operon control protein VSVS05_04118 SM00478 endonuclease III VSVS05_04118 SM01009 AlkA N-terminal domain VSVS05_04121 SM00487 DEAD-like helicases superfamily VSVS05_04121 SM00490 helicase superfamily c-terminal domain VSVS05_04134 SM00347 helix_turn_helix multiple antibiotic resistance protein VSVS05_04139 SM00248 ankyrin repeats VSVS05_04145 SM00671 Sel1-like repeats. VSVS05_04153 SM00382 ATPases associated with a variety of cellular activities VSVS05_04154 SM00052 Putative diguanylate phosphodiesterase VSVS05_04154 SM00267 diguanylate cyclase VSVS05_04159 SM00421 helix_turn_helix, Lux Regulon VSVS05_04162 SM00342 helix_turn_helix, arabinose operon control protein VSVS05_04167 SM00344 helix_turn_helix ASNC type VSVS05_04169 SM00382 ATPases associated with a variety of cellular activities VSVS05_04175 SM00382 ATPases associated with a variety of cellular activities VSVS05_04179 SM00267 diguanylate cyclase VSVS05_04180 SM00028 Tetratricopeptide repeats VSVS05_04184 SM00422 helix_turn_helix, mercury resistance VSVS05_04186 SM00257 Lysin motif VSVS05_04204 SM00382 ATPases associated with a variety of cellular activities VSVS05_04209 SM00487 DEAD-like helicases superfamily VSVS05_04209 SM00490 helicase superfamily c-terminal domain VSVS05_04217 SM00342 helix_turn_helix, arabinose operon control protein VSVS05_04220 SM00357 Cold shock protein domain VSVS05_04226 SM00100 Cyclic nucleotide-monophosphate binding domain VSVS05_04235 SM00267 diguanylate cyclase VSVS05_04235 SM01079 VSVS05_04235 VSVS05_04236 SM00448 cheY-homologous receiver domain VSVS05_04236 SM00862 Transcriptional regulatory protein, C terminal VSVS05_04237 SM00387 Histidine kinase-like ATPases VSVS05_04237 SM00388 His Kinase A (phosphoacceptor) domain VSVS05_04242 SM00849 Metallo-beta-lactamase superfamily VSVS05_04243 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. VSVS05_04243 SM00382 ATPases associated with a variety of cellular activities VSVS05_04251 SM00671 Sel1-like repeats. VSVS05_04259 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain VSVS05_04261 SM01091 Transporter associated domain VSVS05_04262 SM00116 Domain in cystathionine beta-synthase and other proteins. VSVS05_04264 SM00849 Metallo-beta-lactamase superfamily VSVS05_04266 SM01321 VSVS05_04266 VSVS05_04271 SM00267 diguanylate cyclase VSVS05_04274 SM00267 diguanylate cyclase VSVS05_04274 SM01079 VSVS05_04274 VSVS05_04275 SM00530 Helix-turn-helix XRE-family like proteins VSVS05_04292 SM00354 helix_turn _helix lactose operon repressor VSVS05_04297 SM00487 DEAD-like helicases superfamily VSVS05_04297 SM00490 helicase superfamily c-terminal domain VSVS05_04299 SM00357 Cold shock protein domain VSVS05_04300 SM00316 Ribosomal protein S1-like RNA-binding domain VSVS05_04300 SM00955 VSVS05_04300 VSVS05_04305 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VSVS05_04350 SM00528 Domain in histone-like proteins of HNS family VSVS05_04360 SM00411 bacterial (prokaryotic) histone like domain VSVS05_04387 SM00966 SpoVT / AbrB like domain VSVS05_04398 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain VSVS05_04398 SM00437 Bacterial DNA topoisomerase I DNA-binding domain VSVS05_04398 SM00493 VSVS05_04398 VSVS05_04408 SM00857 Resolvase, N terminal domain VSVS05_04419 SM00382 ATPases associated with a variety of cellular activities VSVS05_04420 SM00382 ATPases associated with a variety of cellular activities VSVS05_04420 SM01086 C-terminal, D2-small domain, of ClpB protein VSVS05_04446 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. VSVS05_04447 SM00530 Helix-turn-helix XRE-family like proteins VSVS05_04450 SM00470 ParB-like nuclease domain VSVS05_04456 SM00487 DEAD-like helicases superfamily