VSVS12_00029 65730788ec8e7fadf43e102d432c8f5b 408 Gene3D G3DSA:3.20.20.450 1 204 8.8E-20 T 11-10-2018 IPR035919 EAL domain superfamily VSVS12_00029 65730788ec8e7fadf43e102d432c8f5b 408 Pfam PF00563 EAL domain 77 194 2.1E-15 T 11-10-2018 IPR001633 EAL domain VSVS12_00029 65730788ec8e7fadf43e102d432c8f5b 408 PIRSF PIRSF003180 1 408 8.5E-166 T 11-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing VSVS12_00029 65730788ec8e7fadf43e102d432c8f5b 408 Pfam PF08668 HDOD domain 208 324 2.0E-12 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD VSVS12_00029 65730788ec8e7fadf43e102d432c8f5b 408 SMART SM00052 2 199 8.9E-5 T 11-10-2018 IPR001633 EAL domain VSVS12_00029 65730788ec8e7fadf43e102d432c8f5b 408 SUPERFAMILY SSF141868 4 199 6.8E-30 T 11-10-2018 IPR035919 EAL domain superfamily VSVS12_00029 65730788ec8e7fadf43e102d432c8f5b 408 SUPERFAMILY SSF109604 185 404 8.16E-40 T 11-10-2018 VSVS12_00029 65730788ec8e7fadf43e102d432c8f5b 408 Gene3D G3DSA:1.10.3210.10 205 383 5.5E-20 T 11-10-2018 VSVS12_02223 8623dee7fa52c9be2ce50d73be42a51b 721 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 580 718 4.4E-48 T 11-10-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VSVS12_02223 8623dee7fa52c9be2ce50d73be42a51b 721 SMART SM00382 37 179 7.6E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_02223 8623dee7fa52c9be2ce50d73be42a51b 721 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 362 1.8E-32 T 11-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 VSVS12_02223 8623dee7fa52c9be2ce50d73be42a51b 721 SUPERFAMILY SSF52540 32 222 2.18E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02223 8623dee7fa52c9be2ce50d73be42a51b 721 Gene3D G3DSA:3.30.300.150 565 703 1.4E-40 T 11-10-2018 IPR038249 DNA polymerase III, tau subunit, C-terminal domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VSVS12_02223 8623dee7fa52c9be2ce50d73be42a51b 721 Gene3D G3DSA:3.40.50.300 13 177 3.0E-103 T 11-10-2018 VSVS12_02223 8623dee7fa52c9be2ce50d73be42a51b 721 Gene3D G3DSA:1.10.8.60 8 240 3.0E-103 T 11-10-2018 VSVS12_02223 8623dee7fa52c9be2ce50d73be42a51b 721 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 355 7.7E-135 T 11-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 VSVS12_02223 8623dee7fa52c9be2ce50d73be42a51b 721 Pfam PF13177 DNA polymerase III, delta subunit 20 178 7.8E-44 T 11-10-2018 VSVS12_02223 8623dee7fa52c9be2ce50d73be42a51b 721 Gene3D G3DSA:1.20.272.10 242 361 2.2E-41 T 11-10-2018 VSVS12_02223 8623dee7fa52c9be2ce50d73be42a51b 721 SUPERFAMILY SSF48019 243 364 4.68E-34 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 VSVS12_02223 8623dee7fa52c9be2ce50d73be42a51b 721 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 501 578 1.3E-17 T 11-10-2018 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VSVS12_00811 3f13e153e16d500aa1ba018bb9c717bd 617 SUPERFAMILY SSF100920 384 537 1.7E-50 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 VSVS12_00811 3f13e153e16d500aa1ba018bb9c717bd 617 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VSVS12_00811 3f13e153e16d500aa1ba018bb9c717bd 617 Gene3D G3DSA:3.90.640.10 238 311 5.9E-115 T 11-10-2018 VSVS12_00811 3f13e153e16d500aa1ba018bb9c717bd 617 Gene3D G3DSA:3.30.420.40 23 374 5.9E-115 T 11-10-2018 VSVS12_00811 3f13e153e16d500aa1ba018bb9c717bd 617 SUPERFAMILY SSF53067 19 196 2.33E-50 T 11-10-2018 VSVS12_00811 3f13e153e16d500aa1ba018bb9c717bd 617 Gene3D G3DSA:2.60.34.10 379 519 8.7E-49 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 VSVS12_00811 3f13e153e16d500aa1ba018bb9c717bd 617 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 616 3.6E-264 T 11-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 VSVS12_00811 3f13e153e16d500aa1ba018bb9c717bd 617 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VSVS12_00811 3f13e153e16d500aa1ba018bb9c717bd 617 Gene3D G3DSA:3.30.420.40 194 361 5.9E-115 T 11-10-2018 VSVS12_00811 3f13e153e16d500aa1ba018bb9c717bd 617 SUPERFAMILY SSF53067 200 377 2.13E-51 T 11-10-2018 VSVS12_00811 3f13e153e16d500aa1ba018bb9c717bd 617 Pfam PF00012 Hsp70 protein 22 601 1.3E-190 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VSVS12_00811 3f13e153e16d500aa1ba018bb9c717bd 617 PRINTS PR00301 70kDa heat shock protein signature 20 33 2.6E-54 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VSVS12_00811 3f13e153e16d500aa1ba018bb9c717bd 617 PRINTS PR00301 70kDa heat shock protein signature 152 172 2.6E-54 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VSVS12_00811 3f13e153e16d500aa1ba018bb9c717bd 617 PRINTS PR00301 70kDa heat shock protein signature 466 482 2.6E-54 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VSVS12_00811 3f13e153e16d500aa1ba018bb9c717bd 617 PRINTS PR00301 70kDa heat shock protein signature 211 221 2.6E-54 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VSVS12_00811 3f13e153e16d500aa1ba018bb9c717bd 617 PRINTS PR00301 70kDa heat shock protein signature 329 345 2.6E-54 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VSVS12_00811 3f13e153e16d500aa1ba018bb9c717bd 617 PRINTS PR00301 70kDa heat shock protein signature 385 404 2.6E-54 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VSVS12_00811 3f13e153e16d500aa1ba018bb9c717bd 617 PRINTS PR00301 70kDa heat shock protein signature 360 380 2.6E-54 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VSVS12_00811 3f13e153e16d500aa1ba018bb9c717bd 617 PRINTS PR00301 70kDa heat shock protein signature 48 60 2.6E-54 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VSVS12_00811 3f13e153e16d500aa1ba018bb9c717bd 617 Gene3D G3DSA:1.20.1270.10 520 616 5.1E-25 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 VSVS12_00811 3f13e153e16d500aa1ba018bb9c717bd 617 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 617 45.499 T 11-10-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 VSVS12_00811 3f13e153e16d500aa1ba018bb9c717bd 617 SUPERFAMILY SSF100934 504 616 4.12E-33 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 VSVS12_01603 2dab6b7d584ff890d8ade888146345f1 226 Pfam PF08732 HIM1 75 162 1.3E-9 T 11-10-2018 IPR014843 Protein Him1/Fmp52 VSVS12_01603 2dab6b7d584ff890d8ade888146345f1 226 SUPERFAMILY SSF51735 3 207 2.88E-32 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_01603 2dab6b7d584ff890d8ade888146345f1 226 Gene3D G3DSA:3.40.50.720 1 224 3.1E-47 T 11-10-2018 VSVS12_01882 fe1c8bc0da93e1f9a830ec91045e2932 512 Pfam PF01471 Putative peptidoglycan binding domain 231 264 1.8E-9 T 11-10-2018 IPR002477 Peptidoglycan binding-like VSVS12_01882 fe1c8bc0da93e1f9a830ec91045e2932 512 SUPERFAMILY SSF141523 289 452 2.75E-19 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like VSVS12_01882 fe1c8bc0da93e1f9a830ec91045e2932 512 SUPERFAMILY SSF47090 197 272 4.0E-12 T 11-10-2018 IPR036365 PGBD-like superfamily VSVS12_01882 fe1c8bc0da93e1f9a830ec91045e2932 512 Pfam PF03734 L,D-transpeptidase catalytic domain 291 460 1.6E-28 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 VSVS12_04291 f07c367ae89d04ef3472f7d055be612a 117 SUPERFAMILY SSF74731 2 116 4.32E-50 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_04291 f07c367ae89d04ef3472f7d055be612a 117 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 1.1E-52 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_04291 f07c367ae89d04ef3472f7d055be612a 117 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 4.0E-22 T 11-10-2018 VSVS12_04291 f07c367ae89d04ef3472f7d055be612a 117 Gene3D G3DSA:1.10.1900.20 56 117 1.0E-28 T 11-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_04291 f07c367ae89d04ef3472f7d055be612a 117 PRINTS PR00062 Ribosomal protein L20 signature 42 71 3.6E-42 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_04291 f07c367ae89d04ef3472f7d055be612a 117 PRINTS PR00062 Ribosomal protein L20 signature 12 41 3.6E-42 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_04291 f07c367ae89d04ef3472f7d055be612a 117 PRINTS PR00062 Ribosomal protein L20 signature 75 101 3.6E-42 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_04291 f07c367ae89d04ef3472f7d055be612a 117 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_04291 f07c367ae89d04ef3472f7d055be612a 117 Gene3D G3DSA:1.10.720.90 2 55 3.7E-25 T 11-10-2018 VSVS12_04291 f07c367ae89d04ef3472f7d055be612a 117 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.654 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_04291 f07c367ae89d04ef3472f7d055be612a 117 Pfam PF00453 Ribosomal protein L20 3 108 5.0E-49 T 11-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_03392 79a316d8e1fc1335ebf90cacd1c6cf1b 305 Gene3D G3DSA:1.10.10.10 1 88 1.8E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_03392 79a316d8e1fc1335ebf90cacd1c6cf1b 305 Gene3D G3DSA:3.40.190.290 90 293 1.9E-44 T 11-10-2018 VSVS12_03392 79a316d8e1fc1335ebf90cacd1c6cf1b 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.2E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_03392 79a316d8e1fc1335ebf90cacd1c6cf1b 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.2E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_03392 79a316d8e1fc1335ebf90cacd1c6cf1b 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.2E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_03392 79a316d8e1fc1335ebf90cacd1c6cf1b 305 SUPERFAMILY SSF46785 1 87 6.97E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_03392 79a316d8e1fc1335ebf90cacd1c6cf1b 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 4.6E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_03392 79a316d8e1fc1335ebf90cacd1c6cf1b 305 Pfam PF03466 LysR substrate binding domain 87 290 5.6E-31 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_03392 79a316d8e1fc1335ebf90cacd1c6cf1b 305 SUPERFAMILY SSF53850 87 294 4.19E-37 T 11-10-2018 VSVS12_03763 38b1b69b604416555183e0b6cfe819e1 202 Gene3D G3DSA:1.10.150.240 21 91 1.5E-41 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VSVS12_03763 38b1b69b604416555183e0b6cfe819e1 202 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 127 188 5.5E-12 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VSVS12_03763 38b1b69b604416555183e0b6cfe819e1 202 Gene3D G3DSA:3.40.50.1000 10 190 1.5E-41 T 11-10-2018 IPR023214 HAD superfamily VSVS12_03763 38b1b69b604416555183e0b6cfe819e1 202 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 8 188 2.8E-51 T 11-10-2018 IPR010976 Beta-phosphoglucomutase hydrolase VSVS12_03763 38b1b69b604416555183e0b6cfe819e1 202 Pfam PF13419 Haloacid dehalogenase-like hydrolase 12 188 1.5E-22 T 11-10-2018 VSVS12_03763 38b1b69b604416555183e0b6cfe819e1 202 SUPERFAMILY SSF56784 8 191 7.84E-43 T 11-10-2018 IPR036412 HAD-like superfamily VSVS12_03750 be460b63cbb0b855cfda82fa039beda9 162 Pfam PF13592 Winged helix-turn helix 100 156 2.1E-13 T 11-10-2018 IPR025959 Winged helix-turn helix domain VSVS12_03750 be460b63cbb0b855cfda82fa039beda9 162 SUPERFAMILY SSF46689 16 132 3.58E-18 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_03750 be460b63cbb0b855cfda82fa039beda9 162 Pfam PF13551 Winged helix-turn helix 24 83 1.6E-13 T 11-10-2018 VSVS12_02220 0632c31f8c36a961aaf9698558b39365 232 ProSitePatterns PS00221 MIP family signature. 60 68 - T 11-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 VSVS12_02220 0632c31f8c36a961aaf9698558b39365 232 SUPERFAMILY SSF81338 2 227 3.4E-68 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VSVS12_02220 0632c31f8c36a961aaf9698558b39365 232 Pfam PF00230 Major intrinsic protein 2 222 1.6E-50 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VSVS12_02220 0632c31f8c36a961aaf9698558b39365 232 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 222 5.1E-61 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VSVS12_02220 0632c31f8c36a961aaf9698558b39365 232 Gene3D G3DSA:1.20.1080.10 1 229 3.9E-85 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VSVS12_02220 0632c31f8c36a961aaf9698558b39365 232 PRINTS PR00783 Major intrinsic protein family signature 79 98 1.9E-51 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VSVS12_02220 0632c31f8c36a961aaf9698558b39365 232 PRINTS PR00783 Major intrinsic protein family signature 136 154 1.9E-51 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VSVS12_02220 0632c31f8c36a961aaf9698558b39365 232 PRINTS PR00783 Major intrinsic protein family signature 2 21 1.9E-51 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VSVS12_02220 0632c31f8c36a961aaf9698558b39365 232 PRINTS PR00783 Major intrinsic protein family signature 42 66 1.9E-51 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VSVS12_02220 0632c31f8c36a961aaf9698558b39365 232 PRINTS PR00783 Major intrinsic protein family signature 166 188 1.9E-51 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VSVS12_02220 0632c31f8c36a961aaf9698558b39365 232 PRINTS PR00783 Major intrinsic protein family signature 205 225 1.9E-51 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VSVS12_02220 0632c31f8c36a961aaf9698558b39365 232 Hamap MF_01146 Aquaporin Z [aqpZ]. 1 229 35.053 T 11-10-2018 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 VSVS12_02304 03f401e2904872764b048b55414081c4 581 Pfam PF08345 Flagellar M-ring protein C-terminal 283 453 5.3E-41 T 11-10-2018 IPR013556 Flagellar M-ring C-terminal VSVS12_02304 03f401e2904872764b048b55414081c4 581 PRINTS PR01009 Flagellar M-ring protein signature 376 400 1.5E-21 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VSVS12_02304 03f401e2904872764b048b55414081c4 581 PRINTS PR01009 Flagellar M-ring protein signature 183 197 1.5E-21 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VSVS12_02304 03f401e2904872764b048b55414081c4 581 PRINTS PR01009 Flagellar M-ring protein signature 296 314 1.5E-21 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VSVS12_02304 03f401e2904872764b048b55414081c4 581 PRINTS PR01009 Flagellar M-ring protein signature 226 244 1.5E-21 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VSVS12_02304 03f401e2904872764b048b55414081c4 581 PIRSF PIRSF004862 30 581 5.7E-156 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VSVS12_02304 03f401e2904872764b048b55414081c4 581 Pfam PF01514 Secretory protein of YscJ/FliF family 64 250 1.2E-52 T 11-10-2018 IPR006182 Secretory protein YscJ/FliF VSVS12_02304 03f401e2904872764b048b55414081c4 581 Gene3D G3DSA:3.30.300.30 153 248 4.7E-10 T 11-10-2018 VSVS12_02304 03f401e2904872764b048b55414081c4 581 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 56 579 2.4E-73 T 11-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 VSVS12_04312 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_04312 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_03300 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_03300 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_04089 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_04089 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_03650 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_03650 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_04027 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_04027 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_03827 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_03827 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_04029 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_04029 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_04083 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_04083 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_01845 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_01845 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_02874 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_02874 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_03945 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_03945 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_02523 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_02523 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_01841 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_01841 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_03307 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_03307 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_03206 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_03206 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_01555 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_01555 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_03927 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_03927 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_04184 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_04184 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_04108 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_04108 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_04189 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_04189 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_04125 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_04125 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_01791 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_01791 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_04475 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_04475 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_01464 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_01464 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_04001 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_04001 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_02519 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_02519 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_01991 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_01991 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_04097 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_04097 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_03817 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_03817 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_00090 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_00090 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_03953 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_03953 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_01950 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_01950 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_03667 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_03667 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_01912 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_01912 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_01954 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_01954 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_04309 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_04309 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_03451 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_03451 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_04197 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_04197 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_04092 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_04092 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_03494 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_03494 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_00594 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_00594 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_03648 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_03648 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_04192 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_04192 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_04248 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_04248 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_01434 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_01434 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_01148 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_01148 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_03743 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_03743 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_02715 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_02715 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_01760 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_01760 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_03741 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_03741 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_01142 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_01142 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_01780 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_01780 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_00019 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_00019 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_01453 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_01453 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_03297 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_03297 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_00674 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_00674 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_04030 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_04030 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_02695 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_02695 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_04032 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_04032 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_01436 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_01436 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_02694 fa46dc3e34ff4998f42d03a49fdc4d6a 402 SUPERFAMILY SSF53098 1 376 3.41E-69 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_02694 fa46dc3e34ff4998f42d03a49fdc4d6a 402 Pfam PF01609 Transposase DDE domain 91 327 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_04551 35e4e3f48b8a76ff351c87440f57c0ff 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 4.8E-5 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VSVS12_04551 35e4e3f48b8a76ff351c87440f57c0ff 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 4.8E-5 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VSVS12_04551 35e4e3f48b8a76ff351c87440f57c0ff 251 Gene3D G3DSA:1.10.10.10 1 55 1.1E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_04551 35e4e3f48b8a76ff351c87440f57c0ff 251 SMART SM00420 6 58 2.0E-16 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VSVS12_04551 35e4e3f48b8a76ff351c87440f57c0ff 251 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 11-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VSVS12_04551 35e4e3f48b8a76ff351c87440f57c0ff 251 SMART SM01134 74 232 1.3E-40 T 11-10-2018 VSVS12_04551 35e4e3f48b8a76ff351c87440f57c0ff 251 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 5.7E-16 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VSVS12_04551 35e4e3f48b8a76ff351c87440f57c0ff 251 SUPERFAMILY SSF100950 75 233 1.15E-23 T 11-10-2018 IPR037171 NagB/RpiA transferase-like VSVS12_04551 35e4e3f48b8a76ff351c87440f57c0ff 251 SUPERFAMILY SSF46785 5 61 2.69E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_04551 35e4e3f48b8a76ff351c87440f57c0ff 251 Pfam PF00455 DeoR C terminal sensor domain 76 230 4.4E-39 T 11-10-2018 IPR014036 DeoR C-terminal sensor domain VSVS12_04578 35e4e3f48b8a76ff351c87440f57c0ff 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 4.8E-5 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VSVS12_04578 35e4e3f48b8a76ff351c87440f57c0ff 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 4.8E-5 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VSVS12_04578 35e4e3f48b8a76ff351c87440f57c0ff 251 Gene3D G3DSA:1.10.10.10 1 55 1.1E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_04578 35e4e3f48b8a76ff351c87440f57c0ff 251 SMART SM00420 6 58 2.0E-16 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VSVS12_04578 35e4e3f48b8a76ff351c87440f57c0ff 251 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 11-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VSVS12_04578 35e4e3f48b8a76ff351c87440f57c0ff 251 SMART SM01134 74 232 1.3E-40 T 11-10-2018 VSVS12_04578 35e4e3f48b8a76ff351c87440f57c0ff 251 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 5.7E-16 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VSVS12_04578 35e4e3f48b8a76ff351c87440f57c0ff 251 SUPERFAMILY SSF100950 75 233 1.15E-23 T 11-10-2018 IPR037171 NagB/RpiA transferase-like VSVS12_04578 35e4e3f48b8a76ff351c87440f57c0ff 251 SUPERFAMILY SSF46785 5 61 2.69E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_04578 35e4e3f48b8a76ff351c87440f57c0ff 251 Pfam PF00455 DeoR C terminal sensor domain 76 230 4.4E-39 T 11-10-2018 IPR014036 DeoR C-terminal sensor domain VSVS12_00716 159d368a99d3c6199adbde773720c54e 367 Gene3D G3DSA:1.10.287.470 113 172 2.6E-49 T 11-10-2018 VSVS12_00716 159d368a99d3c6199adbde773720c54e 367 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 64 271 1.8E-21 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VSVS12_00716 159d368a99d3c6199adbde773720c54e 367 SUPERFAMILY SSF111369 68 281 9.94E-30 T 11-10-2018 VSVS12_00716 159d368a99d3c6199adbde773720c54e 367 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 61 355 2.9E-45 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VSVS12_00716 159d368a99d3c6199adbde773720c54e 367 Gene3D G3DSA:2.40.420.20 287 355 2.6E-49 T 11-10-2018 VSVS12_00716 159d368a99d3c6199adbde773720c54e 367 Gene3D G3DSA:2.40.50.100 78 206 2.6E-49 T 11-10-2018 VSVS12_00716 159d368a99d3c6199adbde773720c54e 367 Gene3D G3DSA:2.40.30.170 66 286 2.6E-49 T 11-10-2018 VSVS12_01348 e62606683ab8b41d22d5a16296650fc6 389 Gene3D G3DSA:1.10.10.680 169 250 3.7E-77 T 11-10-2018 VSVS12_01348 e62606683ab8b41d22d5a16296650fc6 389 SUPERFAMILY SSF52980 1 382 2.86E-118 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VSVS12_01348 e62606683ab8b41d22d5a16296650fc6 389 Pfam PF09002 Domain of unknown function (DUF1887) 1 379 1.1E-164 T 11-10-2018 IPR015093 Protein of unknown function DUF1887 VSVS12_01348 e62606683ab8b41d22d5a16296650fc6 389 Gene3D G3DSA:3.40.1350.10 251 376 3.7E-77 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 VSVS12_01348 e62606683ab8b41d22d5a16296650fc6 389 Gene3D G3DSA:3.40.50.10770 1 140 6.6E-59 T 11-10-2018 VSVS12_03146 8cf56660d43d9c847aa1c660fc4f99e1 232 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 13 227 34.465 T 11-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 VSVS12_03146 8cf56660d43d9c847aa1c660fc4f99e1 232 Gene3D G3DSA:3.20.20.70 3 230 2.0E-78 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_03146 8cf56660d43d9c847aa1c660fc4f99e1 232 SUPERFAMILY SSF51366 13 224 1.73E-48 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VSVS12_03146 8cf56660d43d9c847aa1c660fc4f99e1 232 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 37 227 3.2E-83 T 11-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 VSVS12_01876 bc47ca763579bb7a8bbd3cb103947ac8 177 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 30 162 1.3E-26 T 11-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VSVS12_01309 279795e0a67b8e6787ba558866aec660 1183 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 265 472 2.3E-8 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VSVS12_01309 279795e0a67b8e6787ba558866aec660 1183 Gene3D G3DSA:3.40.190.10 258 474 1.6E-18 T 11-10-2018 VSVS12_01309 279795e0a67b8e6787ba558866aec660 1183 SUPERFAMILY SSF53850 254 476 7.71E-16 T 11-10-2018 VSVS12_01309 279795e0a67b8e6787ba558866aec660 1183 Gene3D G3DSA:3.40.190.10 115 205 1.2E-19 T 11-10-2018 VSVS12_01309 279795e0a67b8e6787ba558866aec660 1183 Gene3D G3DSA:3.40.190.10 348 440 1.6E-18 T 11-10-2018 VSVS12_01309 279795e0a67b8e6787ba558866aec660 1183 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 772 879 4.5E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_01309 279795e0a67b8e6787ba558866aec660 1183 SMART SM00387 771 882 2.3E-31 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_01309 279795e0a67b8e6787ba558866aec660 1183 SMART SM00062 262 476 1.2E-4 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VSVS12_01309 279795e0a67b8e6787ba558866aec660 1183 SUPERFAMILY SSF53850 29 229 3.75E-16 T 11-10-2018 VSVS12_01309 279795e0a67b8e6787ba558866aec660 1183 SUPERFAMILY SSF47226 1052 1160 1.96E-6 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 VSVS12_01309 279795e0a67b8e6787ba558866aec660 1183 SUPERFAMILY SSF55874 713 882 6.42E-42 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_01309 279795e0a67b8e6787ba558866aec660 1183 SMART SM00448 953 1069 5.9E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_01309 279795e0a67b8e6787ba558866aec660 1183 PRINTS PR00344 Bacterial sensor protein C-terminal signature 807 821 2.0E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_01309 279795e0a67b8e6787ba558866aec660 1183 PRINTS PR00344 Bacterial sensor protein C-terminal signature 842 860 2.0E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_01309 279795e0a67b8e6787ba558866aec660 1183 PRINTS PR00344 Bacterial sensor protein C-terminal signature 866 879 2.0E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_01309 279795e0a67b8e6787ba558866aec660 1183 PRINTS PR00344 Bacterial sensor protein C-terminal signature 825 835 2.0E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_01309 279795e0a67b8e6787ba558866aec660 1183 SUPERFAMILY SSF52172 955 1073 1.41E-30 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_01309 279795e0a67b8e6787ba558866aec660 1183 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 48 229 9.4E-11 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VSVS12_01309 279795e0a67b8e6787ba558866aec660 1183 Gene3D G3DSA:3.30.565.10 725 883 3.7E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_01309 279795e0a67b8e6787ba558866aec660 1183 Gene3D G3DSA:1.10.287.130 634 722 1.0E-19 T 11-10-2018 VSVS12_01309 279795e0a67b8e6787ba558866aec660 1183 Gene3D G3DSA:3.40.190.10 28 229 1.2E-19 T 11-10-2018 VSVS12_01309 279795e0a67b8e6787ba558866aec660 1183 Pfam PF00512 His Kinase A (phospho-acceptor) domain 660 723 1.5E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_01309 279795e0a67b8e6787ba558866aec660 1183 SUPERFAMILY SSF47384 646 725 8.44E-18 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VSVS12_01309 279795e0a67b8e6787ba558866aec660 1183 Pfam PF00072 Response regulator receiver domain 955 1069 4.2E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_01309 279795e0a67b8e6787ba558866aec660 1183 Gene3D G3DSA:3.40.50.2300 937 1074 5.1E-32 T 11-10-2018 VSVS12_01309 279795e0a67b8e6787ba558866aec660 1183 SMART SM00388 659 724 8.6E-17 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_01271 f242a2972b407bdb5172229192d604e8 157 Pfam PF03830 PTS system sorbose subfamily IIB component 4 149 4.7E-50 T 11-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 VSVS12_01271 f242a2972b407bdb5172229192d604e8 157 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 3 151 7.0E-66 T 11-10-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 VSVS12_01271 f242a2972b407bdb5172229192d604e8 157 SUPERFAMILY SSF52728 3 156 1.31E-50 T 11-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 VSVS12_01271 f242a2972b407bdb5172229192d604e8 157 Gene3D G3DSA:3.40.35.10 1 156 2.2E-54 T 11-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 VSVS12_03158 015a9c65c8a18c69ea5ee996aeac9683 468 Gene3D G3DSA:3.30.70.360 213 294 2.2E-127 T 11-10-2018 VSVS12_03158 015a9c65c8a18c69ea5ee996aeac9683 468 TIGRFAM TIGR01887 dipeptidaselike: putative dipeptidase 19 461 4.6E-109 T 11-10-2018 IPR010964 Peptidase M20A, peptidase V-related GO:0008270|GO:0016805 VSVS12_03158 015a9c65c8a18c69ea5ee996aeac9683 468 SUPERFAMILY SSF55031 193 382 5.02E-20 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VSVS12_03158 015a9c65c8a18c69ea5ee996aeac9683 468 Gene3D G3DSA:3.30.70.360 193 382 2.2E-127 T 11-10-2018 VSVS12_03158 015a9c65c8a18c69ea5ee996aeac9683 468 Pfam PF01546 Peptidase family M20/M25/M40 90 463 1.0E-24 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 VSVS12_03158 015a9c65c8a18c69ea5ee996aeac9683 468 SUPERFAMILY SSF53187 9 466 4.29E-60 T 11-10-2018 VSVS12_03158 015a9c65c8a18c69ea5ee996aeac9683 468 Gene3D G3DSA:3.40.630.10 20 466 2.2E-127 T 11-10-2018 VSVS12_00586 5f526fd4f7fcc3a37e67862324956a9e 655 SUPERFAMILY SSF55073 220 373 4.0E-15 T 11-10-2018 IPR029787 Nucleotide cyclase VSVS12_00586 5f526fd4f7fcc3a37e67862324956a9e 655 SUPERFAMILY SSF141868 394 624 4.45E-41 T 11-10-2018 IPR035919 EAL domain superfamily VSVS12_00586 5f526fd4f7fcc3a37e67862324956a9e 655 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 26 121 2.9E-26 T 11-10-2018 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 VSVS12_00586 5f526fd4f7fcc3a37e67862324956a9e 655 Pfam PF00990 Diguanylate cyclase, GGDEF domain 216 366 2.3E-19 T 11-10-2018 IPR000160 GGDEF domain VSVS12_00586 5f526fd4f7fcc3a37e67862324956a9e 655 Gene3D G3DSA:3.20.20.450 385 642 2.6E-40 T 11-10-2018 IPR035919 EAL domain superfamily VSVS12_00586 5f526fd4f7fcc3a37e67862324956a9e 655 SMART SM00267 203 373 1.9E-6 T 11-10-2018 IPR000160 GGDEF domain VSVS12_00586 5f526fd4f7fcc3a37e67862324956a9e 655 Pfam PF00563 EAL domain 402 623 2.0E-43 T 11-10-2018 IPR001633 EAL domain VSVS12_00586 5f526fd4f7fcc3a37e67862324956a9e 655 Gene3D G3DSA:3.30.70.270 198 373 1.3E-19 T 11-10-2018 VSVS12_00586 5f526fd4f7fcc3a37e67862324956a9e 655 SMART SM00052 384 626 8.3E-18 T 11-10-2018 IPR001633 EAL domain VSVS12_02159 3fc41f487d63c3d2f6dee8f874edf636 283 Pfam PF01226 Formate/nitrite transporter 13 275 3.0E-73 T 11-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 VSVS12_02159 3fc41f487d63c3d2f6dee8f874edf636 283 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 13 278 9.8E-115 T 11-10-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 VSVS12_02159 3fc41f487d63c3d2f6dee8f874edf636 283 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 82 91 - T 11-10-2018 IPR024002 Formate/nitrite transporter, conserved site VSVS12_02159 3fc41f487d63c3d2f6dee8f874edf636 283 Gene3D G3DSA:1.20.1080.10 27 280 7.8E-94 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VSVS12_02159 3fc41f487d63c3d2f6dee8f874edf636 283 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 25 279 6.7E-78 T 11-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 VSVS12_01574 8a789529628f5d18de71aa1b21f730d0 1008 Gene3D G3DSA:3.30.70.2740 414 495 8.1E-6 T 11-10-2018 VSVS12_01574 8a789529628f5d18de71aa1b21f730d0 1008 Pfam PF13183 4Fe-4S dicluster domain 570 680 3.7E-12 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VSVS12_01574 8a789529628f5d18de71aa1b21f730d0 1008 Gene3D G3DSA:3.30.465.40 15 213 7.4E-45 T 11-10-2018 VSVS12_01574 8a789529628f5d18de71aa1b21f730d0 1008 SUPERFAMILY SSF55103 252 537 1.18E-52 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 VSVS12_01574 8a789529628f5d18de71aa1b21f730d0 1008 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 666 677 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VSVS12_01574 8a789529628f5d18de71aa1b21f730d0 1008 Pfam PF02913 FAD linked oxidases, C-terminal domain 276 534 2.2E-61 T 11-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 VSVS12_01574 8a789529628f5d18de71aa1b21f730d0 1008 SUPERFAMILY SSF46548 556 684 1.59E-6 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VSVS12_01574 8a789529628f5d18de71aa1b21f730d0 1008 Pfam PF01565 FAD binding domain 52 191 3.5E-34 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 VSVS12_01574 8a789529628f5d18de71aa1b21f730d0 1008 SUPERFAMILY SSF56176 17 277 1.42E-50 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VSVS12_00739 2460524e60293f1b68de3275b5feef6a 489 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 39 131 3.7E-24 T 11-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 VSVS12_00739 2460524e60293f1b68de3275b5feef6a 489 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 146 459 1.6E-25 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VSVS12_00739 2460524e60293f1b68de3275b5feef6a 489 PRINTS PR00419 Adrenodoxin reductase family signature 211 221 1.3E-22 T 11-10-2018 VSVS12_00739 2460524e60293f1b68de3275b5feef6a 489 PRINTS PR00419 Adrenodoxin reductase family signature 146 168 1.3E-22 T 11-10-2018 VSVS12_00739 2460524e60293f1b68de3275b5feef6a 489 PRINTS PR00419 Adrenodoxin reductase family signature 169 182 1.3E-22 T 11-10-2018 VSVS12_00739 2460524e60293f1b68de3275b5feef6a 489 PRINTS PR00419 Adrenodoxin reductase family signature 286 300 1.3E-22 T 11-10-2018 VSVS12_00739 2460524e60293f1b68de3275b5feef6a 489 SUPERFAMILY SSF51971 386 474 3.65E-8 T 11-10-2018 VSVS12_00739 2460524e60293f1b68de3275b5feef6a 489 Gene3D G3DSA:3.50.50.60 252 406 1.9E-37 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_00739 2460524e60293f1b68de3275b5feef6a 489 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 478 2.9E-197 T 11-10-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 VSVS12_00739 2460524e60293f1b68de3275b5feef6a 489 Gene3D G3DSA:3.40.50.720 145 251 4.9E-13 T 11-10-2018 VSVS12_00739 2460524e60293f1b68de3275b5feef6a 489 SUPERFAMILY SSF46548 2 155 1.2E-35 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VSVS12_00739 2460524e60293f1b68de3275b5feef6a 489 Gene3D G3DSA:3.50.50.60 410 476 3.2E-5 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_00739 2460524e60293f1b68de3275b5feef6a 489 Gene3D G3DSA:1.10.1060.10 12 144 2.8E-24 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VSVS12_00739 2460524e60293f1b68de3275b5feef6a 489 SUPERFAMILY SSF51971 143 407 7.65E-63 T 11-10-2018 VSVS12_03492 47f0e76d045edab867dffcdb7a784d1e 193 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 15 190 6.7E-33 T 11-10-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like VSVS12_03492 47f0e76d045edab867dffcdb7a784d1e 193 SUPERFAMILY SSF51197 7 192 7.69E-66 T 11-10-2018 VSVS12_03492 47f0e76d045edab867dffcdb7a784d1e 193 Gene3D G3DSA:2.60.120.590 3 193 3.9E-67 T 11-10-2018 IPR037151 Alpha-ketoglutarate-dependent dioxygenase AlkB-like superfamily VSVS12_00577 65f84ce87b0eaebe71519211133ea72a 343 SMART SM00382 122 247 0.0034 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_00577 65f84ce87b0eaebe71519211133ea72a 343 Gene3D G3DSA:3.30.450.90 1 100 1.5E-34 T 11-10-2018 VSVS12_00577 65f84ce87b0eaebe71519211133ea72a 343 Pfam PF00437 Type II/IV secretion system protein 12 270 5.2E-47 T 11-10-2018 IPR001482 Type II/IV secretion system protein VSVS12_00577 65f84ce87b0eaebe71519211133ea72a 343 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 3 333 1.8E-148 T 11-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 VSVS12_00577 65f84ce87b0eaebe71519211133ea72a 343 SUPERFAMILY SSF52540 6 336 2.42E-75 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00577 65f84ce87b0eaebe71519211133ea72a 343 Gene3D G3DSA:3.40.50.300 101 341 1.4E-101 T 11-10-2018 VSVS12_00577 65f84ce87b0eaebe71519211133ea72a 343 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 193 207 - T 11-10-2018 IPR001482 Type II/IV secretion system protein VSVS12_04377 5f805e452a566fa6eaf748414bc288f9 237 Pfam PF01609 Transposase DDE domain 103 231 9.8E-16 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_04377 5f805e452a566fa6eaf748414bc288f9 237 Pfam PF13808 DDE_Tnp_1-associated 8 94 3.3E-26 T 11-10-2018 IPR032806 H repeat-associated protein, N-terminal VSVS12_02943 6865d3a6b39d9c61fbecdb24e80c6133 394 Gene3D G3DSA:2.40.30.10 338 393 1.1E-28 T 11-10-2018 VSVS12_02943 6865d3a6b39d9c61fbecdb24e80c6133 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 5.1E-33 T 11-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal VSVS12_02943 6865d3a6b39d9c61fbecdb24e80c6133 394 SUPERFAMILY SSF50447 205 301 3.53E-30 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VSVS12_02943 6865d3a6b39d9c61fbecdb24e80c6133 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 3.8E-230 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VSVS12_02943 6865d3a6b39d9c61fbecdb24e80c6133 394 Gene3D G3DSA:3.40.50.300 1 203 2.7E-70 T 11-10-2018 VSVS12_02943 6865d3a6b39d9c61fbecdb24e80c6133 394 SUPERFAMILY SSF52540 6 219 3.26E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02943 6865d3a6b39d9c61fbecdb24e80c6133 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 1.5E-16 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VSVS12_02943 6865d3a6b39d9c61fbecdb24e80c6133 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site VSVS12_02943 6865d3a6b39d9c61fbecdb24e80c6133 394 SUPERFAMILY SSF50465 298 393 4.32E-35 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VSVS12_02943 6865d3a6b39d9c61fbecdb24e80c6133 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 7.0E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_02943 6865d3a6b39d9c61fbecdb24e80c6133 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 7.0E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_02943 6865d3a6b39d9c61fbecdb24e80c6133 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 7.0E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_02943 6865d3a6b39d9c61fbecdb24e80c6133 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 7.0E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_02943 6865d3a6b39d9c61fbecdb24e80c6133 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 7.0E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_02943 6865d3a6b39d9c61fbecdb24e80c6133 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 3.6E-14 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VSVS12_02943 6865d3a6b39d9c61fbecdb24e80c6133 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.578 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VSVS12_02943 6865d3a6b39d9c61fbecdb24e80c6133 394 Gene3D G3DSA:2.40.30.10 206 334 6.6E-52 T 11-10-2018 VSVS12_02943 6865d3a6b39d9c61fbecdb24e80c6133 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 4.6E-58 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_01820 78598cbfa4cdeceb30f9e50d67e5af97 260 Gene3D G3DSA:3.40.50.150 34 258 1.1E-72 T 11-10-2018 VSVS12_01820 78598cbfa4cdeceb30f9e50d67e5af97 260 Pfam PF13489 Methyltransferase domain 75 222 2.6E-22 T 11-10-2018 VSVS12_01820 78598cbfa4cdeceb30f9e50d67e5af97 260 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 34 258 37.14 T 11-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 VSVS12_01820 78598cbfa4cdeceb30f9e50d67e5af97 260 SUPERFAMILY SSF53335 27 242 2.17E-42 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_01820 78598cbfa4cdeceb30f9e50d67e5af97 260 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 34 252 2.7E-85 T 11-10-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 VSVS12_04490 4790d7820974fb3c9ba154daaaf8277c 84 Gene3D G3DSA:1.10.1220.170 41 84 1.3E-14 T 11-10-2018 VSVS12_04490 4790d7820974fb3c9ba154daaaf8277c 84 Gene3D G3DSA:3.40.1620.10 1 40 6.2E-9 T 11-10-2018 VSVS12_04490 4790d7820974fb3c9ba154daaaf8277c 84 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 1 74 6.1E-23 T 11-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM VSVS12_04490 4790d7820974fb3c9ba154daaaf8277c 84 SUPERFAMILY SSF143120 1 81 1.44E-24 T 11-10-2018 IPR036165 YefM-like superfamily VSVS12_04490 4790d7820974fb3c9ba154daaaf8277c 84 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 4 55 3.6E-9 T 11-10-2018 VSVS12_04282 111139bb2ece20b5a948d570fe0f43a0 207 SUPERFAMILY SSF51182 98 204 1.94E-24 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily VSVS12_04282 111139bb2ece20b5a948d570fe0f43a0 207 Gene3D G3DSA:1.10.260.40 24 96 1.2E-15 T 11-10-2018 VSVS12_04282 111139bb2ece20b5a948d570fe0f43a0 207 SMART SM00530 31 86 2.3E-14 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VSVS12_04282 111139bb2ece20b5a948d570fe0f43a0 207 SUPERFAMILY SSF47413 26 91 2.36E-15 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VSVS12_04282 111139bb2ece20b5a948d570fe0f43a0 207 Pfam PF07883 Cupin domain 146 204 6.2E-11 T 11-10-2018 IPR013096 Cupin 2, conserved barrel VSVS12_04282 111139bb2ece20b5a948d570fe0f43a0 207 Pfam PF01381 Helix-turn-helix 32 84 5.2E-13 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VSVS12_04282 111139bb2ece20b5a948d570fe0f43a0 207 Gene3D G3DSA:2.60.120.10 97 205 1.0E-24 T 11-10-2018 IPR014710 RmlC-like jelly roll fold VSVS12_03541 c2bbe2dac632bf38fab4d3342100badd 144 SUPERFAMILY SSF55785 10 128 3.66E-11 T 11-10-2018 IPR035965 PAS domain superfamily VSVS12_03541 c2bbe2dac632bf38fab4d3342100badd 144 Gene3D G3DSA:3.30.450.20 6 140 1.7E-31 T 11-10-2018 VSVS12_03541 c2bbe2dac632bf38fab4d3342100badd 144 Pfam PF00989 PAS fold 16 134 7.8E-8 T 11-10-2018 IPR013767 PAS fold GO:0006355 VSVS12_00539 a18b4fb2e2d2c9ae369b8aa43426d126 486 PIRSF PIRSF000774 1 486 1.3E-152 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VSVS12_00539 a18b4fb2e2d2c9ae369b8aa43426d126 486 Gene3D G3DSA:1.10.10.60 426 483 2.1E-23 T 11-10-2018 VSVS12_00539 a18b4fb2e2d2c9ae369b8aa43426d126 486 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 464 471 - T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VSVS12_00539 a18b4fb2e2d2c9ae369b8aa43426d126 486 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 483 1.3E-152 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VSVS12_00539 a18b4fb2e2d2c9ae369b8aa43426d126 486 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 373 392 - T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VSVS12_00539 a18b4fb2e2d2c9ae369b8aa43426d126 486 PRINTS PR00045 Sigma-54 factor signature 459 477 3.5E-30 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VSVS12_00539 a18b4fb2e2d2c9ae369b8aa43426d126 486 PRINTS PR00045 Sigma-54 factor signature 385 397 3.5E-30 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VSVS12_00539 a18b4fb2e2d2c9ae369b8aa43426d126 486 PRINTS PR00045 Sigma-54 factor signature 401 412 3.5E-30 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VSVS12_00539 a18b4fb2e2d2c9ae369b8aa43426d126 486 PRINTS PR00045 Sigma-54 factor signature 197 214 3.5E-30 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VSVS12_00539 a18b4fb2e2d2c9ae369b8aa43426d126 486 Pfam PF04963 Sigma-54 factor, core binding domain 125 314 4.3E-58 T 11-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 VSVS12_00539 a18b4fb2e2d2c9ae369b8aa43426d126 486 Gene3D G3DSA:1.10.10.1330 127 244 7.8E-23 T 11-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily VSVS12_00539 a18b4fb2e2d2c9ae369b8aa43426d126 486 Pfam PF04552 Sigma-54, DNA binding domain 326 484 3.3E-72 T 11-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding VSVS12_00539 a18b4fb2e2d2c9ae369b8aa43426d126 486 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 4 49 5.8E-17 T 11-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 VSVS12_04299 6665b5ca3f6c8eb06628b99cb3a6dec2 260 SUPERFAMILY SSF63380 12 122 1.51E-12 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VSVS12_04299 6665b5ca3f6c8eb06628b99cb3a6dec2 260 Gene3D G3DSA:2.40.30.10 5 124 1.5E-30 T 11-10-2018 VSVS12_04299 6665b5ca3f6c8eb06628b99cb3a6dec2 260 Pfam PF08021 Siderophore-interacting FAD-binding domain 17 124 2.6E-27 T 11-10-2018 IPR013113 FAD-binding 9, siderophore-interacting VSVS12_04299 6665b5ca3f6c8eb06628b99cb3a6dec2 260 Pfam PF04954 Siderophore-interacting protein 132 242 1.2E-30 T 11-10-2018 IPR007037 Siderophore-interacting protein, C-terminal domain VSVS12_04299 6665b5ca3f6c8eb06628b99cb3a6dec2 260 Gene3D G3DSA:3.40.50.80 127 260 2.9E-44 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VSVS12_03404 8638639c7f7eb6e53ab1ff730abc592a 516 Gene3D G3DSA:3.30.70.20 367 435 1.0E-5 T 11-10-2018 VSVS12_03404 8638639c7f7eb6e53ab1ff730abc592a 516 Pfam PF12838 4Fe-4S dicluster domain 371 433 1.4E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VSVS12_03404 8638639c7f7eb6e53ab1ff730abc592a 516 SUPERFAMILY SSF54862 330 434 1.53E-8 T 11-10-2018 VSVS12_03404 8638639c7f7eb6e53ab1ff730abc592a 516 Pfam PF13486 Reductive dehalogenase subunit 252 355 2.2E-8 T 11-10-2018 IPR028894 Reductive dehalogenase domain VSVS12_03404 8638639c7f7eb6e53ab1ff730abc592a 516 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 24 48 2.5E-5 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VSVS12_03404 8638639c7f7eb6e53ab1ff730abc592a 516 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 24 46 0.0012 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VSVS12_03404 8638639c7f7eb6e53ab1ff730abc592a 516 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 371 382 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VSVS12_02102 8ade8c1e6426208b8cf0f3e229cc104f 469 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 30 237 8.5E-17 T 11-10-2018 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 Reactome: R-HSA-5173105 VSVS12_04331 bce2b7ea10c4e02134d15a4d0adcb33a 435 Gene3D G3DSA:3.10.450.350 159 263 5.7E-35 T 11-10-2018 VSVS12_04331 bce2b7ea10c4e02134d15a4d0adcb33a 435 Gene3D G3DSA:2.70.70.10 264 394 4.2E-47 T 11-10-2018 IPR011055 Duplicated hybrid motif VSVS12_04331 bce2b7ea10c4e02134d15a4d0adcb33a 435 Gene3D G3DSA:3.10.450.350 65 157 1.9E-33 T 11-10-2018 VSVS12_04331 bce2b7ea10c4e02134d15a4d0adcb33a 435 Pfam PF01551 Peptidase family M23 294 387 4.8E-30 T 11-10-2018 IPR016047 Peptidase M23 VSVS12_04331 bce2b7ea10c4e02134d15a4d0adcb33a 435 SUPERFAMILY SSF51261 143 389 1.78E-66 T 11-10-2018 IPR011055 Duplicated hybrid motif VSVS12_04331 bce2b7ea10c4e02134d15a4d0adcb33a 435 Pfam PF04225 Opacity-associated protein A LysM-like domain 72 153 5.2E-7 T 11-10-2018 IPR007340 Opacity-associated protein A VSVS12_00210 20aaf20d7f9fe9a6ef64c889dad2bcf3 806 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 806 0.0 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VSVS12_00210 20aaf20d7f9fe9a6ef64c889dad2bcf3 806 Gene3D G3DSA:3.10.20.690 594 685 3.3E-34 T 11-10-2018 VSVS12_00210 20aaf20d7f9fe9a6ef64c889dad2bcf3 806 Gene3D G3DSA:3.30.565.10 1 221 1.5E-94 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_00210 20aaf20d7f9fe9a6ef64c889dad2bcf3 806 PRINTS PR01159 DNA gyrase subunit B signature 244 262 1.9E-85 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VSVS12_00210 20aaf20d7f9fe9a6ef64c889dad2bcf3 806 PRINTS PR01159 DNA gyrase subunit B signature 362 376 1.9E-85 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VSVS12_00210 20aaf20d7f9fe9a6ef64c889dad2bcf3 806 PRINTS PR01159 DNA gyrase subunit B signature 775 791 1.9E-85 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VSVS12_00210 20aaf20d7f9fe9a6ef64c889dad2bcf3 806 PRINTS PR01159 DNA gyrase subunit B signature 181 196 1.9E-85 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VSVS12_00210 20aaf20d7f9fe9a6ef64c889dad2bcf3 806 PRINTS PR01159 DNA gyrase subunit B signature 376 396 1.9E-85 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VSVS12_00210 20aaf20d7f9fe9a6ef64c889dad2bcf3 806 PRINTS PR01159 DNA gyrase subunit B signature 759 771 1.9E-85 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VSVS12_00210 20aaf20d7f9fe9a6ef64c889dad2bcf3 806 PRINTS PR01159 DNA gyrase subunit B signature 5 15 1.9E-85 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VSVS12_00210 20aaf20d7f9fe9a6ef64c889dad2bcf3 806 PRINTS PR01159 DNA gyrase subunit B signature 314 330 1.9E-85 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VSVS12_00210 20aaf20d7f9fe9a6ef64c889dad2bcf3 806 PRINTS PR01159 DNA gyrase subunit B signature 196 209 1.9E-85 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VSVS12_00210 20aaf20d7f9fe9a6ef64c889dad2bcf3 806 PRINTS PR01159 DNA gyrase subunit B signature 221 243 1.9E-85 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VSVS12_00210 20aaf20d7f9fe9a6ef64c889dad2bcf3 806 PRINTS PR01159 DNA gyrase subunit B signature 472 481 1.9E-85 T 11-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 VSVS12_00210 20aaf20d7f9fe9a6ef64c889dad2bcf3 806 SMART SM00433 35 799 3.9E-269 T 11-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VSVS12_00210 20aaf20d7f9fe9a6ef64c889dad2bcf3 806 ProSitePatterns PS00177 DNA topoisomerase II signature. 424 432 - T 11-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VSVS12_00210 20aaf20d7f9fe9a6ef64c889dad2bcf3 806 Pfam PF00204 DNA gyrase B 222 392 3.7E-60 T 11-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VSVS12_00210 20aaf20d7f9fe9a6ef64c889dad2bcf3 806 SUPERFAMILY SSF56719 396 797 7.32E-88 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VSVS12_00210 20aaf20d7f9fe9a6ef64c889dad2bcf3 806 Pfam PF01751 Toprim domain 421 533 1.1E-18 T 11-10-2018 IPR006171 TOPRIM domain VSVS12_00210 20aaf20d7f9fe9a6ef64c889dad2bcf3 806 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 735 795 2.6E-30 T 11-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VSVS12_00210 20aaf20d7f9fe9a6ef64c889dad2bcf3 806 SUPERFAMILY SSF55874 4 213 1.83E-74 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_00210 20aaf20d7f9fe9a6ef64c889dad2bcf3 806 SMART SM00387 31 175 4.8E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_00210 20aaf20d7f9fe9a6ef64c889dad2bcf3 806 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 806 108.419 T 11-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VSVS12_00210 20aaf20d7f9fe9a6ef64c889dad2bcf3 806 PRINTS PR00418 DNA topoisomerase II family signature 489 505 8.2E-71 T 11-10-2018 VSVS12_00210 20aaf20d7f9fe9a6ef64c889dad2bcf3 806 PRINTS PR00418 DNA topoisomerase II family signature 527 539 8.2E-71 T 11-10-2018 VSVS12_00210 20aaf20d7f9fe9a6ef64c889dad2bcf3 806 PRINTS PR00418 DNA topoisomerase II family signature 270 283 8.2E-71 T 11-10-2018 VSVS12_00210 20aaf20d7f9fe9a6ef64c889dad2bcf3 806 PRINTS PR00418 DNA topoisomerase II family signature 35 50 8.2E-71 T 11-10-2018 VSVS12_00210 20aaf20d7f9fe9a6ef64c889dad2bcf3 806 PRINTS PR00418 DNA topoisomerase II family signature 113 127 8.2E-71 T 11-10-2018 VSVS12_00210 20aaf20d7f9fe9a6ef64c889dad2bcf3 806 PRINTS PR00418 DNA topoisomerase II family signature 422 436 8.2E-71 T 11-10-2018 VSVS12_00210 20aaf20d7f9fe9a6ef64c889dad2bcf3 806 PRINTS PR00418 DNA topoisomerase II family signature 507 524 8.2E-71 T 11-10-2018 VSVS12_00210 20aaf20d7f9fe9a6ef64c889dad2bcf3 806 PRINTS PR00418 DNA topoisomerase II family signature 738 754 8.2E-71 T 11-10-2018 VSVS12_00210 20aaf20d7f9fe9a6ef64c889dad2bcf3 806 PRINTS PR00418 DNA topoisomerase II family signature 70 83 8.2E-71 T 11-10-2018 VSVS12_00210 20aaf20d7f9fe9a6ef64c889dad2bcf3 806 SUPERFAMILY SSF54211 222 394 8.91E-59 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VSVS12_00210 20aaf20d7f9fe9a6ef64c889dad2bcf3 806 Gene3D G3DSA:3.30.230.10 222 394 2.3E-72 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VSVS12_00210 20aaf20d7f9fe9a6ef64c889dad2bcf3 806 Gene3D G3DSA:3.40.50.670 400 585 3.6E-75 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VSVS12_00210 20aaf20d7f9fe9a6ef64c889dad2bcf3 806 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 172 2.9E-23 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_00210 20aaf20d7f9fe9a6ef64c889dad2bcf3 806 Gene3D G3DSA:3.40.50.670 707 805 2.6E-27 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VSVS12_03477 b97fda61bfdc18847019efe2cff2220f 338 Pfam PF00571 CBS domain 284 331 3.9E-8 T 11-10-2018 IPR000644 CBS domain VSVS12_03477 b97fda61bfdc18847019efe2cff2220f 338 Pfam PF01595 Domain of unknown function DUF21 10 200 1.9E-32 T 11-10-2018 IPR002550 CNNM, transmembrane domain VSVS12_03477 b97fda61bfdc18847019efe2cff2220f 338 Gene3D G3DSA:3.10.580.10 202 335 8.1E-17 T 11-10-2018 VSVS12_03477 b97fda61bfdc18847019efe2cff2220f 338 SMART SM00116 285 332 4.4E-5 T 11-10-2018 IPR000644 CBS domain VSVS12_03477 b97fda61bfdc18847019efe2cff2220f 338 SUPERFAMILY SSF54631 208 331 2.15E-16 T 11-10-2018 VSVS12_00717 2e1c8a3ab6c80bc366d430ede29392eb 1055 SUPERFAMILY SSF82714 706 787 3.53E-5 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VSVS12_00717 2e1c8a3ab6c80bc366d430ede29392eb 1055 SUPERFAMILY SSF82693 140 325 3.3E-12 T 11-10-2018 VSVS12_00717 2e1c8a3ab6c80bc366d430ede29392eb 1055 Gene3D G3DSA:1.20.1640.10 11 511 8.9E-258 T 11-10-2018 VSVS12_00717 2e1c8a3ab6c80bc366d430ede29392eb 1055 Gene3D G3DSA:3.30.70.1440 654 852 8.9E-258 T 11-10-2018 VSVS12_00717 2e1c8a3ab6c80bc366d430ede29392eb 1055 Gene3D G3DSA:1.20.1640.10 512 1018 8.9E-258 T 11-10-2018 VSVS12_00717 2e1c8a3ab6c80bc366d430ede29392eb 1055 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 3.0E-28 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_00717 2e1c8a3ab6c80bc366d430ede29392eb 1055 PRINTS PR00702 Acriflavin resistance protein family signature 331 354 3.0E-28 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_00717 2e1c8a3ab6c80bc366d430ede29392eb 1055 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 3.0E-28 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_00717 2e1c8a3ab6c80bc366d430ede29392eb 1055 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 3.0E-28 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_00717 2e1c8a3ab6c80bc366d430ede29392eb 1055 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 3.0E-28 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_00717 2e1c8a3ab6c80bc366d430ede29392eb 1055 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 3.0E-28 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_00717 2e1c8a3ab6c80bc366d430ede29392eb 1055 Gene3D G3DSA:3.30.70.1430 567 653 8.9E-258 T 11-10-2018 VSVS12_00717 2e1c8a3ab6c80bc366d430ede29392eb 1055 Gene3D G3DSA:3.30.70.1320 135 325 8.9E-258 T 11-10-2018 VSVS12_00717 2e1c8a3ab6c80bc366d430ede29392eb 1055 SUPERFAMILY SSF82866 292 491 4.58E-40 T 11-10-2018 VSVS12_00717 2e1c8a3ab6c80bc366d430ede29392eb 1055 Pfam PF00873 AcrB/AcrD/AcrF family 5 1021 2.4E-169 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_00717 2e1c8a3ab6c80bc366d430ede29392eb 1055 Gene3D G3DSA:3.30.70.1430 41 801 8.9E-258 T 11-10-2018 VSVS12_00717 2e1c8a3ab6c80bc366d430ede29392eb 1055 Gene3D G3DSA:3.30.2090.10 705 793 8.9E-258 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VSVS12_00717 2e1c8a3ab6c80bc366d430ede29392eb 1055 SUPERFAMILY SSF82693 41 133 2.59E-22 T 11-10-2018 VSVS12_00717 2e1c8a3ab6c80bc366d430ede29392eb 1055 Gene3D G3DSA:3.30.2090.10 179 270 8.9E-258 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VSVS12_00717 2e1c8a3ab6c80bc366d430ede29392eb 1055 SUPERFAMILY SSF82866 791 1023 4.84E-48 T 11-10-2018 VSVS12_00717 2e1c8a3ab6c80bc366d430ede29392eb 1055 SUPERFAMILY SSF82714 184 263 7.46E-11 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VSVS12_02064 8c537283c66839aac18eaf1901b93d22 298 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 203 297 4.4E-30 T 11-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 VSVS12_02064 8c537283c66839aac18eaf1901b93d22 298 Gene3D G3DSA:3.30.70.120 225 298 9.7E-34 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VSVS12_02064 8c537283c66839aac18eaf1901b93d22 298 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 155 176 - T 11-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 VSVS12_02064 8c537283c66839aac18eaf1901b93d22 298 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 6 196 3.9E-55 T 11-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 VSVS12_02064 8c537283c66839aac18eaf1901b93d22 298 SUPERFAMILY SSF53850 5 222 2.76E-67 T 11-10-2018 VSVS12_02064 8c537283c66839aac18eaf1901b93d22 298 Gene3D G3DSA:3.40.190.10 102 191 3.5E-70 T 11-10-2018 VSVS12_02064 8c537283c66839aac18eaf1901b93d22 298 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 5 298 35.391 T 11-10-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 VSVS12_02064 8c537283c66839aac18eaf1901b93d22 298 Pfam PF01634 ATP phosphoribosyltransferase 53 218 2.4E-45 T 11-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 VSVS12_02064 8c537283c66839aac18eaf1901b93d22 298 Pfam PF08029 HisG, C-terminal domain 222 295 3.3E-24 T 11-10-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 VSVS12_02064 8c537283c66839aac18eaf1901b93d22 298 Gene3D G3DSA:3.40.190.10 6 219 3.5E-70 T 11-10-2018 VSVS12_02064 8c537283c66839aac18eaf1901b93d22 298 SUPERFAMILY SSF54913 225 297 4.45E-21 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta VSVS12_01685 8d41cb9fc19f97dfe37c28a547597db5 326 Gene3D G3DSA:1.10.760.10 145 320 1.1E-71 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VSVS12_01685 8d41cb9fc19f97dfe37c28a547597db5 326 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 156 229 5.7E-12 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_01685 8d41cb9fc19f97dfe37c28a547597db5 326 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 242 317 1.0E-9 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_01685 8d41cb9fc19f97dfe37c28a547597db5 326 TIGRFAM TIGR00782 ccoP: cytochrome c oxidase, cbb3-type, subunit III 114 324 1.9E-56 T 11-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III VSVS12_01685 8d41cb9fc19f97dfe37c28a547597db5 326 PRINTS PR00605 Class IC cytochrome C signature 295 317 1.8E-5 T 11-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VSVS12_01685 8d41cb9fc19f97dfe37c28a547597db5 326 PRINTS PR00605 Class IC cytochrome C signature 166 177 1.8E-5 T 11-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 VSVS12_01685 8d41cb9fc19f97dfe37c28a547597db5 326 Gene3D G3DSA:1.10.760.10 211 297 1.1E-71 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VSVS12_01685 8d41cb9fc19f97dfe37c28a547597db5 326 Gene3D G3DSA:1.20.58.1490 1 93 5.0E-34 T 11-10-2018 IPR038414 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal domain superfamily VSVS12_01685 8d41cb9fc19f97dfe37c28a547597db5 326 SUPERFAMILY SSF46626 55 240 5.01E-30 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VSVS12_01685 8d41cb9fc19f97dfe37c28a547597db5 326 Pfam PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP 38 83 3.8E-23 T 11-10-2018 IPR032858 Cbb3-type cytochrome c oxidase subunit CcoP, N-terminal VSVS12_01685 8d41cb9fc19f97dfe37c28a547597db5 326 SUPERFAMILY SSF46626 240 324 4.35E-22 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VSVS12_01685 8d41cb9fc19f97dfe37c28a547597db5 326 PIRSF PIRSF000006 1 324 4.4E-105 T 11-10-2018 IPR004678 Cytochrome c oxidase cbb3-type, subunit III VSVS12_02493 48e29af25e7d3c1a9e032df798f57ceb 436 Gene3D G3DSA:3.20.20.60 1 419 1.1E-182 T 11-10-2018 VSVS12_02493 48e29af25e7d3c1a9e032df798f57ceb 436 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 258 436 2.4E-89 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 VSVS12_02493 48e29af25e7d3c1a9e032df798f57ceb 436 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 10 257 1.1E-113 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 VSVS12_02493 48e29af25e7d3c1a9e032df798f57ceb 436 PIRSF PIRSF001362 1 436 5.0E-223 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 VSVS12_02493 48e29af25e7d3c1a9e032df798f57ceb 436 ProSitePatterns PS00161 Isocitrate lyase signature. 195 200 - T 11-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 VSVS12_02493 48e29af25e7d3c1a9e032df798f57ceb 436 Pfam PF00463 Isocitrate lyase family 258 436 1.7E-52 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 VSVS12_02493 48e29af25e7d3c1a9e032df798f57ceb 436 Pfam PF00463 Isocitrate lyase family 14 257 3.3E-62 T 11-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 VSVS12_02493 48e29af25e7d3c1a9e032df798f57ceb 436 SUPERFAMILY SSF51621 6 436 5.38E-152 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VSVS12_03811 c2519a61750155b9106c170f3c14b4bf 629 SUPERFAMILY SSF51206 7 135 4.06E-27 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like VSVS12_03811 c2519a61750155b9106c170f3c14b4bf 629 Pfam PF03445 Putative nucleotidyltransferase DUF294 305 442 2.2E-44 T 11-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 VSVS12_03811 c2519a61750155b9106c170f3c14b4bf 629 Pfam PF00027 Cyclic nucleotide-binding domain 37 119 2.8E-13 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain VSVS12_03811 c2519a61750155b9106c170f3c14b4bf 629 Gene3D G3DSA:3.10.580.10 145 283 1.3E-31 T 11-10-2018 VSVS12_03811 c2519a61750155b9106c170f3c14b4bf 629 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 479 622 8.5E-46 T 11-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding VSVS12_03811 c2519a61750155b9106c170f3c14b4bf 629 SMART SM00116 233 280 3.8E-6 T 11-10-2018 IPR000644 CBS domain VSVS12_03811 c2519a61750155b9106c170f3c14b4bf 629 SMART SM00116 159 216 0.99 T 11-10-2018 IPR000644 CBS domain VSVS12_03811 c2519a61750155b9106c170f3c14b4bf 629 SMART SM00100 17 134 7.8E-7 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain VSVS12_03811 c2519a61750155b9106c170f3c14b4bf 629 Gene3D G3DSA:2.60.120.10 1 144 1.3E-23 T 11-10-2018 IPR014710 RmlC-like jelly roll fold VSVS12_03811 c2519a61750155b9106c170f3c14b4bf 629 Pfam PF00571 CBS domain 226 278 4.3E-10 T 11-10-2018 IPR000644 CBS domain VSVS12_03811 c2519a61750155b9106c170f3c14b4bf 629 Pfam PF00571 CBS domain 154 214 4.5E-7 T 11-10-2018 IPR000644 CBS domain VSVS12_03811 c2519a61750155b9106c170f3c14b4bf 629 SUPERFAMILY SSF54631 145 279 2.02E-26 T 11-10-2018 VSVS12_00616 f8aabafd78e759ffd0cd50f4f00030fe 140 SUPERFAMILY SSF89946 8 126 1.7E-38 T 11-10-2018 IPR036701 RraB-like superfamily VSVS12_00616 f8aabafd78e759ffd0cd50f4f00030fe 140 Pfam PF06877 Regulator of ribonuclease activity B 18 120 1.9E-33 T 11-10-2018 IPR009671 Regulator of ribonuclease activity B domain VSVS12_00616 f8aabafd78e759ffd0cd50f4f00030fe 140 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 11 124 29.306 T 11-10-2018 IPR016716 Regulator of ribonuclease activity B VSVS12_00616 f8aabafd78e759ffd0cd50f4f00030fe 140 PIRSF PIRSF018193 8 140 1.9E-58 T 11-10-2018 IPR016716 Regulator of ribonuclease activity B VSVS12_00616 f8aabafd78e759ffd0cd50f4f00030fe 140 Gene3D G3DSA:3.30.70.970 1 131 2.4E-58 T 11-10-2018 IPR036701 RraB-like superfamily VSVS12_03933 edb647afd1dc7dc6ff591e65c0f9f929 577 Gene3D G3DSA:1.10.287.130 173 281 2.8E-5 T 11-10-2018 VSVS12_03933 edb647afd1dc7dc6ff591e65c0f9f929 577 SMART SM00387 474 570 5.6E-11 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_03933 edb647afd1dc7dc6ff591e65c0f9f929 577 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 34 127 3.0E-21 T 11-10-2018 IPR029095 NarX-like, N-terminal VSVS12_03933 edb647afd1dc7dc6ff591e65c0f9f929 577 SUPERFAMILY SSF158472 176 225 2.75E-6 T 11-10-2018 VSVS12_03933 edb647afd1dc7dc6ff591e65c0f9f929 577 Gene3D G3DSA:3.30.565.10 435 576 1.3E-23 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_03933 edb647afd1dc7dc6ff591e65c0f9f929 577 SUPERFAMILY SSF55874 445 567 8.51E-17 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_03933 edb647afd1dc7dc6ff591e65c0f9f929 577 Gene3D G3DSA:1.20.120.960 40 148 4.8E-13 T 11-10-2018 VSVS12_03933 edb647afd1dc7dc6ff591e65c0f9f929 577 SMART SM00304 176 228 1.1E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_03933 edb647afd1dc7dc6ff591e65c0f9f929 577 PIRSF PIRSF003167 2 313 7.6E-74 T 11-10-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 VSVS12_03933 edb647afd1dc7dc6ff591e65c0f9f929 577 PIRSF PIRSF003167 293 576 4.0E-95 T 11-10-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 VSVS12_03933 edb647afd1dc7dc6ff591e65c0f9f929 577 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 476 569 9.2E-10 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_03933 edb647afd1dc7dc6ff591e65c0f9f929 577 Pfam PF07730 Histidine kinase 365 433 1.3E-16 T 11-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 VSVS12_01586 ce626947fff042f69d3552b84fca2159 423 TIGRFAM TIGR01224 hutI: imidazolonepropionase 48 420 1.6E-145 T 11-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VSVS12_01586 ce626947fff042f69d3552b84fca2159 423 SUPERFAMILY SSF51338 23 420 9.88E-25 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VSVS12_01586 ce626947fff042f69d3552b84fca2159 423 Gene3D G3DSA:3.20.20.140 83 381 1.3E-157 T 11-10-2018 VSVS12_01586 ce626947fff042f69d3552b84fca2159 423 Pfam PF01979 Amidohydrolase family 80 399 1.4E-15 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VSVS12_01586 ce626947fff042f69d3552b84fca2159 423 Gene3D G3DSA:2.30.40.10 29 418 1.3E-157 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VSVS12_01586 ce626947fff042f69d3552b84fca2159 423 Hamap MF_00372 Imidazolonepropionase [hutI]. 24 421 40.32 T 11-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VSVS12_01586 ce626947fff042f69d3552b84fca2159 423 SUPERFAMILY SSF51556 82 381 2.91E-80 T 11-10-2018 IPR032466 Metal-dependent hydrolase VSVS12_03090 593f90617d2eac2522d8e0f93cb0fa79 219 SUPERFAMILY SSF55469 8 216 2.49E-52 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VSVS12_03090 593f90617d2eac2522d8e0f93cb0fa79 219 Gene3D G3DSA:3.40.109.10 1 219 4.8E-48 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VSVS12_03090 593f90617d2eac2522d8e0f93cb0fa79 219 Pfam PF00881 Nitroreductase family 10 194 1.9E-18 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 VSVS12_02266 8b11c66cb275118fc10b4953b9d96b5d 1124 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 1095 1111 5.2E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VSVS12_02266 8b11c66cb275118fc10b4953b9d96b5d 1124 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 1080 1095 5.2E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VSVS12_02266 8b11c66cb275118fc10b4953b9d96b5d 1124 SUPERFAMILY SSF63829 203 414 2.88E-6 T 11-10-2018 VSVS12_02266 8b11c66cb275118fc10b4953b9d96b5d 1124 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 1066 1107 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VSVS12_02266 8b11c66cb275118fc10b4953b9d96b5d 1124 SMART SM00342 1029 1111 2.3E-24 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VSVS12_02266 8b11c66cb275118fc10b4953b9d96b5d 1124 SUPERFAMILY SSF63829 430 617 3.4E-7 T 11-10-2018 VSVS12_02266 8b11c66cb275118fc10b4953b9d96b5d 1124 Gene3D G3DSA:2.130.10.10 125 342 1.5E-19 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VSVS12_02266 8b11c66cb275118fc10b4953b9d96b5d 1124 Gene3D G3DSA:1.10.10.60 1009 1118 4.7E-24 T 11-10-2018 VSVS12_02266 8b11c66cb275118fc10b4953b9d96b5d 1124 Pfam PF12833 Helix-turn-helix domain 1036 1111 1.1E-21 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VSVS12_02266 8b11c66cb275118fc10b4953b9d96b5d 1124 SUPERFAMILY SSF46689 1065 1113 4.17E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_02266 8b11c66cb275118fc10b4953b9d96b5d 1124 Gene3D G3DSA:2.130.10.10 351 621 1.6E-23 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VSVS12_00096 8ec774b38b46add44953ed5ec4472cf2 556 SUPERFAMILY SSF53649 245 537 4.58E-19 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VSVS12_00096 8ec774b38b46add44953ed5ec4472cf2 556 Gene3D G3DSA:3.40.720.10 225 554 1.0E-88 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VSVS12_00096 8ec774b38b46add44953ed5ec4472cf2 556 Pfam PF08019 Domain of unknown function (DUF1705) 64 214 9.3E-50 T 11-10-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 VSVS12_00096 8ec774b38b46add44953ed5ec4472cf2 556 Pfam PF00884 Sulfatase 245 535 1.2E-49 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VSVS12_00868 cc22dbb4a14acfd21f2104ee748c2ae0 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 7.1E-75 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 VSVS12_00868 cc22dbb4a14acfd21f2104ee748c2ae0 185 Gene3D G3DSA:3.30.1360.40 36 100 3.6E-30 T 11-10-2018 VSVS12_00868 cc22dbb4a14acfd21f2104ee748c2ae0 185 Gene3D G3DSA:1.10.132.20 1 35 6.9E-10 T 11-10-2018 VSVS12_00868 cc22dbb4a14acfd21f2104ee748c2ae0 185 Gene3D G3DSA:1.10.132.20 101 185 2.1E-26 T 11-10-2018 VSVS12_00868 cc22dbb4a14acfd21f2104ee748c2ae0 185 SUPERFAMILY SSF55194 2 184 6.8E-71 T 11-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 VSVS12_00868 cc22dbb4a14acfd21f2104ee748c2ae0 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.408 T 11-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 VSVS12_00868 cc22dbb4a14acfd21f2104ee748c2ae0 185 Pfam PF01765 Ribosome recycling factor 20 183 7.8E-62 T 11-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 VSVS12_03920 cee0b6b5536c0672c2bbf7cdc5c3af29 576 PRINTS PR01607 Apyrase family signature 233 256 1.8E-18 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VSVS12_03920 cee0b6b5536c0672c2bbf7cdc5c3af29 576 PRINTS PR01607 Apyrase family signature 214 231 1.8E-18 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VSVS12_03920 cee0b6b5536c0672c2bbf7cdc5c3af29 576 PRINTS PR01607 Apyrase family signature 513 532 1.8E-18 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VSVS12_03920 cee0b6b5536c0672c2bbf7cdc5c3af29 576 PRINTS PR01607 Apyrase family signature 9 27 1.8E-18 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VSVS12_03920 cee0b6b5536c0672c2bbf7cdc5c3af29 576 PRINTS PR01607 Apyrase family signature 273 293 1.8E-18 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VSVS12_03920 cee0b6b5536c0672c2bbf7cdc5c3af29 576 Pfam PF02872 5'-nucleotidase, C-terminal domain 373 537 2.3E-23 T 11-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VSVS12_03920 cee0b6b5536c0672c2bbf7cdc5c3af29 576 SUPERFAMILY SSF56300 10 325 3.8E-70 T 11-10-2018 VSVS12_03920 cee0b6b5536c0672c2bbf7cdc5c3af29 576 Pfam PF00149 Calcineurin-like phosphoesterase 11 250 2.3E-6 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VSVS12_03920 cee0b6b5536c0672c2bbf7cdc5c3af29 576 SUPERFAMILY SSF55816 368 566 7.46E-41 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VSVS12_03920 cee0b6b5536c0672c2bbf7cdc5c3af29 576 Gene3D G3DSA:3.60.21.10 2 367 4.2E-84 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like VSVS12_03920 cee0b6b5536c0672c2bbf7cdc5c3af29 576 Gene3D G3DSA:3.90.780.10 368 574 1.2E-39 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VSVS12_02457 830dd9a6f8d2eb52b7f97b175a766387 419 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 1 417 8.1E-194 T 11-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 VSVS12_02457 830dd9a6f8d2eb52b7f97b175a766387 419 Pfam PF00583 Acetyltransferase (GNAT) family 308 391 1.5E-6 T 11-10-2018 IPR000182 GNAT domain VSVS12_02457 830dd9a6f8d2eb52b7f97b175a766387 419 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 419 208.656 T 11-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 VSVS12_02457 830dd9a6f8d2eb52b7f97b175a766387 419 PIRSF PIRSF000423 1 419 2.0E-192 T 11-10-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 VSVS12_02457 830dd9a6f8d2eb52b7f97b175a766387 419 Pfam PF00696 Amino acid kinase family 2 244 3.4E-30 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VSVS12_02457 830dd9a6f8d2eb52b7f97b175a766387 419 SUPERFAMILY SSF55729 274 399 5.58E-19 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_02457 830dd9a6f8d2eb52b7f97b175a766387 419 Gene3D G3DSA:3.40.630.30 271 419 2.7E-38 T 11-10-2018 VSVS12_02457 830dd9a6f8d2eb52b7f97b175a766387 419 Gene3D G3DSA:3.40.1160.10 1 269 3.7E-78 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VSVS12_02457 830dd9a6f8d2eb52b7f97b175a766387 419 SUPERFAMILY SSF53633 1 268 8.12E-61 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VSVS12_00432 a7f5b25cb9fb334ee3e1d527e5a1528b 295 SUPERFAMILY SSF53850 89 293 1.81E-36 T 11-10-2018 VSVS12_00432 a7f5b25cb9fb334ee3e1d527e5a1528b 295 SUPERFAMILY SSF46785 1 86 2.1E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_00432 a7f5b25cb9fb334ee3e1d527e5a1528b 295 Gene3D G3DSA:1.10.10.10 1 84 1.9E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_00432 a7f5b25cb9fb334ee3e1d527e5a1528b 295 Gene3D G3DSA:3.40.190.10 161 261 5.6E-65 T 11-10-2018 VSVS12_00432 a7f5b25cb9fb334ee3e1d527e5a1528b 295 Gene3D G3DSA:3.40.190.10 91 290 5.6E-65 T 11-10-2018 VSVS12_00432 a7f5b25cb9fb334ee3e1d527e5a1528b 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 2.4E-20 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_00432 a7f5b25cb9fb334ee3e1d527e5a1528b 295 Pfam PF03466 LysR substrate binding domain 89 292 1.0E-41 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_00432 a7f5b25cb9fb334ee3e1d527e5a1528b 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.1E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_00432 a7f5b25cb9fb334ee3e1d527e5a1528b 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.1E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_00432 a7f5b25cb9fb334ee3e1d527e5a1528b 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.1E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_03820 ddc75490c5ddb6f3646fb8acb4bd5e90 404 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 VSVS12_03820 ddc75490c5ddb6f3646fb8acb4bd5e90 404 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 VSVS12_03820 ddc75490c5ddb6f3646fb8acb4bd5e90 404 SUPERFAMILY SSF53901 271 399 5.24E-39 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 VSVS12_03820 ddc75490c5ddb6f3646fb8acb4bd5e90 404 Gene3D G3DSA:3.40.47.10 6 276 6.2E-149 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 VSVS12_03820 ddc75490c5ddb6f3646fb8acb4bd5e90 404 Pfam PF02803 Thiolase, C-terminal domain 270 399 7.6E-45 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 VSVS12_03820 ddc75490c5ddb6f3646fb8acb4bd5e90 404 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 VSVS12_03820 ddc75490c5ddb6f3646fb8acb4bd5e90 404 Pfam PF00108 Thiolase, N-terminal domain 4 263 1.3E-96 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 VSVS12_03820 ddc75490c5ddb6f3646fb8acb4bd5e90 404 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 4.9E-146 T 11-10-2018 IPR002155 Thiolase GO:0016747 VSVS12_03820 ddc75490c5ddb6f3646fb8acb4bd5e90 404 PIRSF PIRSF000429 1 402 2.3E-128 T 11-10-2018 IPR002155 Thiolase GO:0016747 VSVS12_03820 ddc75490c5ddb6f3646fb8acb4bd5e90 404 SUPERFAMILY SSF53901 4 270 1.63E-83 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 VSVS12_03820 ddc75490c5ddb6f3646fb8acb4bd5e90 404 Gene3D G3DSA:3.40.47.10 126 398 6.2E-149 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 VSVS12_04279 4b4d26c26cf2d05634e2d0669a9ad2b6 223 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 213 5.3E-21 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_04279 4b4d26c26cf2d05634e2d0669a9ad2b6 223 Gene3D G3DSA:1.10.10.10 150 217 1.6E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_04279 4b4d26c26cf2d05634e2d0669a9ad2b6 223 ProSitePatterns PS00622 LuxR-type HTH domain signature. 173 200 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_04279 4b4d26c26cf2d05634e2d0669a9ad2b6 223 SMART SM00421 156 213 5.1E-25 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_04279 4b4d26c26cf2d05634e2d0669a9ad2b6 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 189 201 2.0E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_04279 4b4d26c26cf2d05634e2d0669a9ad2b6 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 173 2.0E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_04279 4b4d26c26cf2d05634e2d0669a9ad2b6 223 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 189 2.0E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_04279 4b4d26c26cf2d05634e2d0669a9ad2b6 223 Gene3D G3DSA:3.40.50.2300 7 149 1.9E-34 T 11-10-2018 VSVS12_04279 4b4d26c26cf2d05634e2d0669a9ad2b6 223 SUPERFAMILY SSF46894 149 215 7.14E-21 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VSVS12_00662 f40ca68c703007bbb1f503b04e858c80 174 PIRSF PIRSF038996 1 174 4.1E-58 T 11-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 VSVS12_00662 f40ca68c703007bbb1f503b04e858c80 174 TIGRFAM TIGR01752 flav_long: flavodoxin 3 169 2.0E-64 T 11-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 VSVS12_00662 f40ca68c703007bbb1f503b04e858c80 174 Gene3D G3DSA:3.40.50.360 2 174 3.5E-48 T 11-10-2018 IPR029039 Flavoprotein-like superfamily VSVS12_00662 f40ca68c703007bbb1f503b04e858c80 174 Pfam PF00258 Flavodoxin 6 162 1.8E-28 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VSVS12_00662 f40ca68c703007bbb1f503b04e858c80 174 SUPERFAMILY SSF52218 2 170 1.55E-48 T 11-10-2018 IPR029039 Flavoprotein-like superfamily VSVS12_03915 a9d38f85f6532f1bf906408dddbc3251 185 Pfam PF08274 PhnA Zinc-Ribbon 13 52 9.1E-8 T 11-10-2018 IPR013987 PhnA protein, N-terminal VSVS12_03915 a9d38f85f6532f1bf906408dddbc3251 185 Pfam PF03831 PhnA domain 120 184 7.6E-23 T 11-10-2018 IPR013988 PhnA protein, C-terminal VSVS12_03915 a9d38f85f6532f1bf906408dddbc3251 185 Gene3D G3DSA:2.30.30.40 116 185 6.8E-24 T 11-10-2018 VSVS12_03915 a9d38f85f6532f1bf906408dddbc3251 185 SMART SM00782 6 52 7.2E-26 T 11-10-2018 IPR013991 PhnA protein N-terminal, proteobacterial VSVS12_03915 a9d38f85f6532f1bf906408dddbc3251 185 SUPERFAMILY SSF82057 118 184 1.88E-20 T 11-10-2018 VSVS12_03415 f9b9448fd493042801255ac26277d722 665 SUPERFAMILY SSF52058 273 446 1.79E-7 T 11-10-2018 VSVS12_03415 f9b9448fd493042801255ac26277d722 665 Pfam PF13306 Leucine rich repeats (6 copies) 310 428 1.2E-31 T 11-10-2018 IPR026906 Leucine rich repeat 5 VSVS12_03415 f9b9448fd493042801255ac26277d722 665 Pfam PF13306 Leucine rich repeats (6 copies) 557 646 1.2E-13 T 11-10-2018 IPR026906 Leucine rich repeat 5 VSVS12_03415 f9b9448fd493042801255ac26277d722 665 Pfam PF13306 Leucine rich repeats (6 copies) 49 166 8.3E-31 T 11-10-2018 IPR026906 Leucine rich repeat 5 VSVS12_03415 f9b9448fd493042801255ac26277d722 665 Gene3D G3DSA:3.80.10.10 114 193 6.1E-16 T 11-10-2018 IPR032675 Leucine-rich repeat domain superfamily VSVS12_03415 f9b9448fd493042801255ac26277d722 665 Gene3D G3DSA:3.80.10.10 8 113 1.3E-23 T 11-10-2018 IPR032675 Leucine-rich repeat domain superfamily VSVS12_03415 f9b9448fd493042801255ac26277d722 665 Gene3D G3DSA:3.80.10.10 194 364 1.3E-46 T 11-10-2018 IPR032675 Leucine-rich repeat domain superfamily VSVS12_03415 f9b9448fd493042801255ac26277d722 665 Gene3D G3DSA:3.80.10.10 541 652 4.7E-18 T 11-10-2018 IPR032675 Leucine-rich repeat domain superfamily VSVS12_03415 f9b9448fd493042801255ac26277d722 665 Gene3D G3DSA:3.80.10.10 365 540 1.2E-39 T 11-10-2018 IPR032675 Leucine-rich repeat domain superfamily VSVS12_03184 20eff12fcf4d3da4d7ea27419589d7ee 69 Pfam PF11686 Protein of unknown function (DUF3283) 4 64 7.7E-33 T 11-10-2018 IPR021700 Protein of unknown function DUF3283 VSVS12_03184 20eff12fcf4d3da4d7ea27419589d7ee 69 SUPERFAMILY SSF46575 1 63 3.53E-6 T 11-10-2018 VSVS12_00939 e195ec92d9c6423ef35684d3a495ab1a 149 Gene3D G3DSA:2.40.50.140 80 149 8.0E-11 T 11-10-2018 VSVS12_00939 e195ec92d9c6423ef35684d3a495ab1a 149 SUPERFAMILY SSF141322 93 147 6.02E-5 T 11-10-2018 VSVS12_00939 e195ec92d9c6423ef35684d3a495ab1a 149 Pfam PF01957 NfeD-like C-terminal, partner-binding 12 148 1.3E-25 T 11-10-2018 IPR002810 NfeD-like, C-terminal domain VSVS12_04054 70808f04267d079371b85ed72ad4808a 95 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 3 89 3.8E-15 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VSVS12_04054 70808f04267d079371b85ed72ad4808a 95 Gene3D G3DSA:3.30.2310.20 1 93 1.2E-17 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily VSVS12_04509 aa5751ffe8ee2e399bfb1304b4d7385b 256 SUPERFAMILY SSF55729 83 207 3.12E-6 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_04509 aa5751ffe8ee2e399bfb1304b4d7385b 256 Pfam PF00583 Acetyltransferase (GNAT) family 133 205 4.6E-6 T 11-10-2018 IPR000182 GNAT domain VSVS12_04509 aa5751ffe8ee2e399bfb1304b4d7385b 256 Gene3D G3DSA:3.40.630.30 109 225 2.3E-6 T 11-10-2018 VSVS12_04383 aa5751ffe8ee2e399bfb1304b4d7385b 256 SUPERFAMILY SSF55729 83 207 3.12E-6 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_04383 aa5751ffe8ee2e399bfb1304b4d7385b 256 Pfam PF00583 Acetyltransferase (GNAT) family 133 205 4.6E-6 T 11-10-2018 IPR000182 GNAT domain VSVS12_04383 aa5751ffe8ee2e399bfb1304b4d7385b 256 Gene3D G3DSA:3.40.630.30 109 225 2.3E-6 T 11-10-2018 VSVS12_00582 0c113655dda20071d778f39b1a416557 940 Gene3D G3DSA:3.40.50.300 6 593 3.0E-244 T 11-10-2018 VSVS12_00582 0c113655dda20071d778f39b1a416557 940 Gene3D G3DSA:1.20.1580.10 90 491 3.0E-244 T 11-10-2018 VSVS12_00582 0c113655dda20071d778f39b1a416557 940 Gene3D G3DSA:1.10.8.280 286 402 3.0E-244 T 11-10-2018 VSVS12_00582 0c113655dda20071d778f39b1a416557 940 Gene3D G3DSA:1.20.1580.10 691 829 1.4E-139 T 11-10-2018 VSVS12_00582 0c113655dda20071d778f39b1a416557 940 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 923 0.0 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 VSVS12_00582 0c113655dda20071d778f39b1a416557 940 SUPERFAMILY SSF52540 4 568 3.45E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00582 0c113655dda20071d778f39b1a416557 940 SUPERFAMILY SSF52540 619 912 9.1E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00582 0c113655dda20071d778f39b1a416557 940 Pfam PF00005 ABC transporter 622 859 4.9E-10 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_00582 0c113655dda20071d778f39b1a416557 940 ProSitePatterns PS00211 ABC transporters family signature. 829 843 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_00582 0c113655dda20071d778f39b1a416557 940 Gene3D G3DSA:3.40.50.300 616 935 1.4E-139 T 11-10-2018 VSVS12_00582 0c113655dda20071d778f39b1a416557 940 Gene3D G3DSA:3.30.190.20 130 243 3.0E-244 T 11-10-2018 VSVS12_00582 0c113655dda20071d778f39b1a416557 940 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 939 22.725 T 11-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 VSVS12_00582 0c113655dda20071d778f39b1a416557 940 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_03842 16ced1ec0874a9486270fd71b6eebd65 107 SUPERFAMILY SSF82771 8 80 3.79E-9 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 VSVS12_03842 16ced1ec0874a9486270fd71b6eebd65 107 Gene3D G3DSA:3.40.1440.10 3 100 2.1E-23 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 VSVS12_03842 16ced1ec0874a9486270fd71b6eebd65 107 Pfam PF01541 GIY-YIG catalytic domain 9 81 1.1E-10 T 11-10-2018 IPR000305 GIY-YIG endonuclease VSVS12_01444 7d26d15fe9c8af5a22ddb2969b950b56 802 Gene3D G3DSA:3.20.20.80 283 629 1.7E-119 T 11-10-2018 VSVS12_01444 7d26d15fe9c8af5a22ddb2969b950b56 802 SUPERFAMILY SSF49303 191 285 2.1E-14 T 11-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily VSVS12_01444 7d26d15fe9c8af5a22ddb2969b950b56 802 Gene3D G3DSA:2.60.120.260 2 189 1.3E-47 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily VSVS12_01444 7d26d15fe9c8af5a22ddb2969b950b56 802 SUPERFAMILY SSF49303 732 799 2.59E-7 T 11-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily VSVS12_01444 7d26d15fe9c8af5a22ddb2969b950b56 802 Pfam PF00703 Glycosyl hydrolases family 2 201 286 8.1E-5 T 11-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 VSVS12_01444 7d26d15fe9c8af5a22ddb2969b950b56 802 SUPERFAMILY SSF51445 283 631 4.58E-100 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily VSVS12_01444 7d26d15fe9c8af5a22ddb2969b950b56 802 SUPERFAMILY SSF49785 3 186 9.69E-47 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily VSVS12_01444 7d26d15fe9c8af5a22ddb2969b950b56 802 Gene3D G3DSA:2.60.40.10 190 282 5.4E-9 T 11-10-2018 IPR013783 Immunoglobulin-like fold VSVS12_01444 7d26d15fe9c8af5a22ddb2969b950b56 802 SUPERFAMILY SSF49303 637 721 2.01E-6 T 11-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily VSVS12_02141 ddc826f536dcc3b646861ee112954a59 450 Pfam PF07676 WD40-like Beta Propeller Repeat 300 336 4.3E-14 T 11-10-2018 IPR011659 WD40-like Beta Propeller VSVS12_02141 ddc826f536dcc3b646861ee112954a59 450 Pfam PF07676 WD40-like Beta Propeller Repeat 222 248 4.2E-9 T 11-10-2018 IPR011659 WD40-like Beta Propeller VSVS12_02141 ddc826f536dcc3b646861ee112954a59 450 Pfam PF07676 WD40-like Beta Propeller Repeat 257 292 8.2E-7 T 11-10-2018 IPR011659 WD40-like Beta Propeller VSVS12_02141 ddc826f536dcc3b646861ee112954a59 450 Pfam PF04052 TolB amino-terminal domain 24 126 5.7E-35 T 11-10-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 VSVS12_02141 ddc826f536dcc3b646861ee112954a59 450 Hamap MF_00671 Tol-Pal system protein TolB [tolB]. 5 446 51.572 T 11-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 VSVS12_02141 ddc826f536dcc3b646861ee112954a59 450 Gene3D G3DSA:3.40.50.10070 23 183 6.7E-50 T 11-10-2018 IPR036752 TolB, N-terminal domain superfamily GO:0015031|GO:0042597 VSVS12_02141 ddc826f536dcc3b646861ee112954a59 450 SUPERFAMILY SSF52964 29 181 7.06E-42 T 11-10-2018 VSVS12_02141 ddc826f536dcc3b646861ee112954a59 450 Gene3D G3DSA:2.120.10.30 185 450 1.7E-98 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like VSVS12_02141 ddc826f536dcc3b646861ee112954a59 450 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 17 447 1.1E-170 T 11-10-2018 IPR014167 Tol-Pal system protein TolB GO:0017038|GO:0042597 VSVS12_02141 ddc826f536dcc3b646861ee112954a59 450 SUPERFAMILY SSF69304 176 448 2.35E-58 T 11-10-2018 VSVS12_01935 ba4778ee9ee5f276c2adc332fc9e4ec6 332 Pfam PF13515 Fusaric acid resistance protein-like 190 313 3.9E-19 T 11-10-2018 VSVS12_02196 e251f7303d141dd38b98ac2dbb62f233 431 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 426 3.0E-155 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 VSVS12_02196 e251f7303d141dd38b98ac2dbb62f233 431 Gene3D G3DSA:3.65.10.10 247 424 9.0E-156 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 VSVS12_02196 e251f7303d141dd38b98ac2dbb62f233 431 PIRSF PIRSF000505 1 431 2.8E-152 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 VSVS12_02196 e251f7303d141dd38b98ac2dbb62f233 431 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 431 34.009 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 VSVS12_02196 e251f7303d141dd38b98ac2dbb62f233 431 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 429 5.5E-141 T 11-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 VSVS12_02196 e251f7303d141dd38b98ac2dbb62f233 431 SUPERFAMILY SSF55205 1 429 8.97E-141 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 VSVS12_02196 e251f7303d141dd38b98ac2dbb62f233 431 ProSitePatterns PS00104 EPSP synthase signature 1. 95 109 - T 11-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 VSVS12_02196 e251f7303d141dd38b98ac2dbb62f233 431 ProSitePatterns PS00885 EPSP synthase signature 2. 344 362 - T 11-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 VSVS12_02196 e251f7303d141dd38b98ac2dbb62f233 431 Gene3D G3DSA:3.65.10.10 20 229 9.0E-156 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 VSVS12_03573 9faecb635b3dd1867198207ba60755f6 264 PRINTS PR00737 Glycosyl hydrolase family 16 signature 90 108 2.6E-10 T 11-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 VSVS12_03573 9faecb635b3dd1867198207ba60755f6 264 PRINTS PR00737 Glycosyl hydrolase family 16 signature 109 125 2.6E-10 T 11-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 VSVS12_03573 9faecb635b3dd1867198207ba60755f6 264 Pfam PF00722 Glycosyl hydrolases family 16 56 237 9.7E-31 T 11-10-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 VSVS12_03573 9faecb635b3dd1867198207ba60755f6 264 Gene3D G3DSA:2.60.120.200 112 263 2.2E-29 T 11-10-2018 VSVS12_03573 9faecb635b3dd1867198207ba60755f6 264 Gene3D G3DSA:2.60.120.200 22 111 7.3E-14 T 11-10-2018 VSVS12_03573 9faecb635b3dd1867198207ba60755f6 264 SUPERFAMILY SSF49899 11 232 2.31E-40 T 11-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily VSVS12_00221 9aca2f27087bb45ab6e5d32cfe4e9c1c 613 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 607 45.026 T 11-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VSVS12_00221 9aca2f27087bb45ab6e5d32cfe4e9c1c 613 Pfam PF00920 Dehydratase family 34 604 8.1E-218 T 11-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VSVS12_00221 9aca2f27087bb45ab6e5d32cfe4e9c1c 613 SUPERFAMILY SSF52016 421 608 1.65E-60 T 11-10-2018 VSVS12_00221 9aca2f27087bb45ab6e5d32cfe4e9c1c 613 SUPERFAMILY SSF143975 3 420 5.62E-134 T 11-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VSVS12_00221 9aca2f27087bb45ab6e5d32cfe4e9c1c 613 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VSVS12_00221 9aca2f27087bb45ab6e5d32cfe4e9c1c 613 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 607 2.9E-263 T 11-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VSVS12_00221 9aca2f27087bb45ab6e5d32cfe4e9c1c 613 Gene3D G3DSA:3.50.30.80 421 573 1.6E-55 T 11-10-2018 VSVS12_00221 9aca2f27087bb45ab6e5d32cfe4e9c1c 613 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VSVS12_00873 f82e2d8a1ed16d1fec7e5364806a1f00 800 Gene3D G3DSA:2.40.160.50 425 800 1.0E-119 T 11-10-2018 VSVS12_00873 f82e2d8a1ed16d1fec7e5364806a1f00 800 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 800 1.0E-278 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 VSVS12_00873 f82e2d8a1ed16d1fec7e5364806a1f00 800 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 800 25.856 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 VSVS12_00873 f82e2d8a1ed16d1fec7e5364806a1f00 800 Pfam PF01103 Surface antigen 448 800 7.8E-88 T 11-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 VSVS12_00873 f82e2d8a1ed16d1fec7e5364806a1f00 800 Pfam PF07244 Surface antigen variable number repeat 266 344 4.4E-10 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 VSVS12_00873 f82e2d8a1ed16d1fec7e5364806a1f00 800 Pfam PF07244 Surface antigen variable number repeat 176 263 2.5E-18 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 VSVS12_00873 f82e2d8a1ed16d1fec7e5364806a1f00 800 Pfam PF07244 Surface antigen variable number repeat 347 420 3.1E-16 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 VSVS12_00873 f82e2d8a1ed16d1fec7e5364806a1f00 800 Pfam PF07244 Surface antigen variable number repeat 92 172 3.1E-11 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 VSVS12_00873 f82e2d8a1ed16d1fec7e5364806a1f00 800 Gene3D G3DSA:3.10.20.310 347 424 3.4E-25 T 11-10-2018 VSVS12_00873 f82e2d8a1ed16d1fec7e5364806a1f00 800 Gene3D G3DSA:3.10.20.310 175 264 2.1E-26 T 11-10-2018 VSVS12_00873 f82e2d8a1ed16d1fec7e5364806a1f00 800 PIRSF PIRSF006076 1 800 9.3E-248 T 11-10-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 VSVS12_00873 f82e2d8a1ed16d1fec7e5364806a1f00 800 Gene3D G3DSA:3.10.20.310 18 91 1.0E-18 T 11-10-2018 VSVS12_00873 f82e2d8a1ed16d1fec7e5364806a1f00 800 Gene3D G3DSA:3.10.20.310 92 174 9.3E-17 T 11-10-2018 VSVS12_00873 f82e2d8a1ed16d1fec7e5364806a1f00 800 Gene3D G3DSA:3.10.20.310 265 346 3.1E-13 T 11-10-2018 VSVS12_04396 4a69dc5e16bbc994b1f11de30d7d8119 349 Gene3D G3DSA:3.30.428.10 178 349 1.7E-70 T 11-10-2018 IPR036265 HIT-like superfamily VSVS12_04396 4a69dc5e16bbc994b1f11de30d7d8119 349 Gene3D G3DSA:3.30.428.10 47 177 2.1E-54 T 11-10-2018 IPR036265 HIT-like superfamily VSVS12_04396 4a69dc5e16bbc994b1f11de30d7d8119 349 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 5 348 9.6E-180 T 11-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VSVS12_04396 4a69dc5e16bbc994b1f11de30d7d8119 349 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 6 178 1.6E-64 T 11-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VSVS12_04396 4a69dc5e16bbc994b1f11de30d7d8119 349 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 153 170 - T 11-10-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VSVS12_04396 4a69dc5e16bbc994b1f11de30d7d8119 349 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 187 348 1.5E-62 T 11-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VSVS12_04396 4a69dc5e16bbc994b1f11de30d7d8119 349 PIRSF PIRSF000808 3 345 5.1E-120 T 11-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VSVS12_04396 4a69dc5e16bbc994b1f11de30d7d8119 349 SUPERFAMILY SSF54197 6 179 2.16E-70 T 11-10-2018 IPR036265 HIT-like superfamily VSVS12_04396 4a69dc5e16bbc994b1f11de30d7d8119 349 SUPERFAMILY SSF54197 181 348 9.02E-53 T 11-10-2018 IPR036265 HIT-like superfamily VSVS12_04522 4a69dc5e16bbc994b1f11de30d7d8119 349 Gene3D G3DSA:3.30.428.10 178 349 1.7E-70 T 11-10-2018 IPR036265 HIT-like superfamily VSVS12_04522 4a69dc5e16bbc994b1f11de30d7d8119 349 Gene3D G3DSA:3.30.428.10 47 177 2.1E-54 T 11-10-2018 IPR036265 HIT-like superfamily VSVS12_04522 4a69dc5e16bbc994b1f11de30d7d8119 349 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 5 348 9.6E-180 T 11-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VSVS12_04522 4a69dc5e16bbc994b1f11de30d7d8119 349 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 6 178 1.6E-64 T 11-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VSVS12_04522 4a69dc5e16bbc994b1f11de30d7d8119 349 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 153 170 - T 11-10-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VSVS12_04522 4a69dc5e16bbc994b1f11de30d7d8119 349 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 187 348 1.5E-62 T 11-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VSVS12_04522 4a69dc5e16bbc994b1f11de30d7d8119 349 PIRSF PIRSF000808 3 345 5.1E-120 T 11-10-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 VSVS12_04522 4a69dc5e16bbc994b1f11de30d7d8119 349 SUPERFAMILY SSF54197 6 179 2.16E-70 T 11-10-2018 IPR036265 HIT-like superfamily VSVS12_04522 4a69dc5e16bbc994b1f11de30d7d8119 349 SUPERFAMILY SSF54197 181 348 9.02E-53 T 11-10-2018 IPR036265 HIT-like superfamily VSVS12_01051 1838b46fc932a372b333a5c16dc645d8 211 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 7.6E-5 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 VSVS12_01051 1838b46fc932a372b333a5c16dc645d8 211 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 11-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 VSVS12_01051 1838b46fc932a372b333a5c16dc645d8 211 TIGRFAM TIGR01083 nth: endonuclease III 4 194 2.5E-88 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 VSVS12_01051 1838b46fc932a372b333a5c16dc645d8 211 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 11-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 VSVS12_01051 1838b46fc932a372b333a5c16dc645d8 211 PIRSF PIRSF001435 1 210 1.9E-50 T 11-10-2018 VSVS12_01051 1838b46fc932a372b333a5c16dc645d8 211 Gene3D G3DSA:1.10.340.30 21 132 3.6E-78 T 11-10-2018 VSVS12_01051 1838b46fc932a372b333a5c16dc645d8 211 Pfam PF00633 Helix-hairpin-helix motif 100 127 5.8E-8 T 11-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 VSVS12_01051 1838b46fc932a372b333a5c16dc645d8 211 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.867 T 11-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 VSVS12_01051 1838b46fc932a372b333a5c16dc645d8 211 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 1.8E-18 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 VSVS12_01051 1838b46fc932a372b333a5c16dc645d8 211 SMART SM00525 186 206 5.9E-6 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 VSVS12_01051 1838b46fc932a372b333a5c16dc645d8 211 SMART SM00478 38 185 2.6E-53 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 VSVS12_01051 1838b46fc932a372b333a5c16dc645d8 211 SUPERFAMILY SSF48150 4 208 9.26E-72 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 VSVS12_01051 1838b46fc932a372b333a5c16dc645d8 211 Gene3D G3DSA:1.10.1670.10 11 203 3.6E-78 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 VSVS12_01005 79a499633e2d163d144925ba1b0ab1dc 290 Pfam PF00288 GHMP kinases N terminal domain 88 145 4.8E-8 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 VSVS12_01005 79a499633e2d163d144925ba1b0ab1dc 290 Gene3D G3DSA:3.30.230.10 2 160 1.0E-53 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VSVS12_01005 79a499633e2d163d144925ba1b0ab1dc 290 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 5 279 9.1E-94 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 VSVS12_01005 79a499633e2d163d144925ba1b0ab1dc 290 PIRSF PIRSF010376 4 280 5.2E-86 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 VSVS12_01005 79a499633e2d163d144925ba1b0ab1dc 290 SUPERFAMILY SSF55060 162 278 2.35E-34 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily VSVS12_01005 79a499633e2d163d144925ba1b0ab1dc 290 Pfam PF08544 GHMP kinases C terminal 196 259 7.0E-8 T 11-10-2018 IPR013750 GHMP kinase, C-terminal domain VSVS12_01005 79a499633e2d163d144925ba1b0ab1dc 290 SUPERFAMILY SSF54211 6 158 1.52E-44 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VSVS12_01005 79a499633e2d163d144925ba1b0ab1dc 290 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 6 272 31.878 T 11-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 VSVS12_01005 79a499633e2d163d144925ba1b0ab1dc 290 Gene3D G3DSA:3.30.70.890 162 280 7.1E-28 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily VSVS12_01456 cdc6cfcb554969ba71466c548b10321b 299 Gene3D G3DSA:1.10.8.1080 220 298 5.9E-17 T 11-10-2018 VSVS12_01456 cdc6cfcb554969ba71466c548b10321b 299 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 10 284 3.3E-97 T 11-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 VSVS12_01456 cdc6cfcb554969ba71466c548b10321b 299 Pfam PF13580 SIS domain 46 166 1.2E-10 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VSVS12_01456 cdc6cfcb554969ba71466c548b10321b 299 SUPERFAMILY SSF53697 9 250 1.31E-60 T 11-10-2018 VSVS12_01456 cdc6cfcb554969ba71466c548b10321b 299 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 186 203 - T 11-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 VSVS12_01456 cdc6cfcb554969ba71466c548b10321b 299 Gene3D G3DSA:3.40.50.10490 3 219 1.3E-66 T 11-10-2018 VSVS12_01456 cdc6cfcb554969ba71466c548b10321b 299 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 3 296 35.442 T 11-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 VSVS12_01843 5211dbf0613bd876f717d639d21695f8 221 Pfam PF00043 Glutathione S-transferase, C-terminal domain 125 197 4.0E-7 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal VSVS12_01843 5211dbf0613bd876f717d639d21695f8 221 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 85 1.8E-8 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VSVS12_01843 5211dbf0613bd876f717d639d21695f8 221 Gene3D G3DSA:1.20.1050.10 101 219 9.7E-10 T 11-10-2018 VSVS12_01843 5211dbf0613bd876f717d639d21695f8 221 Gene3D G3DSA:3.40.30.10 3 100 3.0E-10 T 11-10-2018 VSVS12_01843 5211dbf0613bd876f717d639d21695f8 221 SUPERFAMILY SSF47616 102 215 3.76E-16 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VSVS12_01843 5211dbf0613bd876f717d639d21695f8 221 SUPERFAMILY SSF52833 5 96 5.58E-11 T 11-10-2018 IPR036249 Thioredoxin-like superfamily VSVS12_00135 f3f8a99cff78bc2e83fa1ab175d9dd4d 598 Gene3D G3DSA:3.50.30.80 418 562 5.5E-47 T 11-10-2018 VSVS12_00135 f3f8a99cff78bc2e83fa1ab175d9dd4d 598 Hamap MF_02094 Phosphogluconate dehydratase [edd]. 2 598 53.865 T 11-10-2018 VSVS12_00135 f3f8a99cff78bc2e83fa1ab175d9dd4d 598 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 3 596 9.5E-252 T 11-10-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 VSVS12_00135 f3f8a99cff78bc2e83fa1ab175d9dd4d 598 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 504 515 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VSVS12_00135 f3f8a99cff78bc2e83fa1ab175d9dd4d 598 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 155 165 - T 11-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VSVS12_00135 f3f8a99cff78bc2e83fa1ab175d9dd4d 598 Pfam PF00920 Dehydratase family 68 594 4.2E-148 T 11-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VSVS12_00135 f3f8a99cff78bc2e83fa1ab175d9dd4d 598 SUPERFAMILY SSF143975 3 417 1.83E-131 T 11-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 VSVS12_00135 f3f8a99cff78bc2e83fa1ab175d9dd4d 598 SUPERFAMILY SSF52016 418 596 1.65E-51 T 11-10-2018 VSVS12_03517 dd1483435bc88b39c27ea2acc03b3686 672 SUPERFAMILY SSF50249 84 173 1.13E-23 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_03517 dd1483435bc88b39c27ea2acc03b3686 672 SUPERFAMILY SSF50249 568 649 1.61E-17 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_03517 dd1483435bc88b39c27ea2acc03b3686 672 Gene3D G3DSA:2.40.50.640 83 157 8.2E-30 T 11-10-2018 VSVS12_03517 dd1483435bc88b39c27ea2acc03b3686 672 Gene3D G3DSA:2.40.50.140 1 81 6.3E-28 T 11-10-2018 VSVS12_03517 dd1483435bc88b39c27ea2acc03b3686 672 SUPERFAMILY SSF50249 192 562 9.14E-109 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_03517 dd1483435bc88b39c27ea2acc03b3686 672 SMART SM00316 566 650 1.9E-4 T 11-10-2018 IPR022967 RNA-binding domain, S1 VSVS12_03517 dd1483435bc88b39c27ea2acc03b3686 672 SUPERFAMILY SSF50249 8 81 1.1E-14 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_03517 dd1483435bc88b39c27ea2acc03b3686 672 SMART SM00955 193 523 5.4E-117 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 VSVS12_03517 dd1483435bc88b39c27ea2acc03b3686 672 SMART SM00357 23 79 1.8E-8 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 VSVS12_03517 dd1483435bc88b39c27ea2acc03b3686 672 Pfam PF00575 S1 RNA binding domain 565 646 8.3E-9 T 11-10-2018 IPR003029 S1 domain GO:0003676 VSVS12_03517 dd1483435bc88b39c27ea2acc03b3686 672 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 649 0.0 T 11-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 VSVS12_03517 dd1483435bc88b39c27ea2acc03b3686 672 Gene3D G3DSA:2.40.50.140 565 651 9.4E-32 T 11-10-2018 VSVS12_03517 dd1483435bc88b39c27ea2acc03b3686 672 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 648 2.8E-184 T 11-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 VSVS12_03517 dd1483435bc88b39c27ea2acc03b3686 672 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 650 41.774 T 11-10-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 VSVS12_03517 dd1483435bc88b39c27ea2acc03b3686 672 Pfam PF08206 Ribonuclease B OB domain 24 79 4.1E-17 T 11-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain VSVS12_03517 dd1483435bc88b39c27ea2acc03b3686 672 ProSitePatterns PS01175 Ribonuclease II family signature. 490 514 - T 11-10-2018 IPR022966 Ribonuclease II/R, conserved site VSVS12_03517 dd1483435bc88b39c27ea2acc03b3686 672 Pfam PF00773 RNB domain 193 521 3.9E-85 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 VSVS12_03571 b2c3c01f381c41b39723b62706720128 460 Pfam PF11329 Protein of unknown function (DUF3131) 52 428 1.3E-111 T 11-10-2018 IPR021478 Protein of unknown function DUF3131 VSVS12_00281 dc40691718feba5ee3ad89758f0ab631 311 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 19 276 1.7E-81 T 11-10-2018 IPR017039 Virulence factor BrkB VSVS12_00281 dc40691718feba5ee3ad89758f0ab631 311 Pfam PF03631 Virulence factor BrkB 30 276 6.5E-60 T 11-10-2018 IPR017039 Virulence factor BrkB VSVS12_00281 dc40691718feba5ee3ad89758f0ab631 311 PIRSF PIRSF035875 4 289 3.9E-55 T 11-10-2018 IPR017039 Virulence factor BrkB VSVS12_00281 dc40691718feba5ee3ad89758f0ab631 311 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 17 296 23.387 T 11-10-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial VSVS12_03351 94491a5ece9c5a896570925103f33a0e 333 Gene3D G3DSA:3.40.190.100 114 250 1.3E-37 T 11-10-2018 VSVS12_03351 94491a5ece9c5a896570925103f33a0e 333 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 29 310 2.1E-61 T 11-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 VSVS12_03351 94491a5ece9c5a896570925103f33a0e 333 SUPERFAMILY SSF53850 23 328 1.47E-66 T 11-10-2018 VSVS12_03351 94491a5ece9c5a896570925103f33a0e 333 Gene3D G3DSA:3.40.190.10 30 321 1.3E-37 T 11-10-2018 VSVS12_03749 6a822c15baf2215fcb413220f041f45c 117 Gene3D G3DSA:3.30.420.470 5 111 5.8E-12 T 11-10-2018 VSVS12_03749 6a822c15baf2215fcb413220f041f45c 117 Pfam PF13358 DDE superfamily endonuclease 5 85 3.7E-17 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain VSVS12_02253 41f3e763d71d01f72742144885300d23 126 Pfam PF00072 Response regulator receiver domain 7 119 1.2E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_02253 41f3e763d71d01f72742144885300d23 126 Gene3D G3DSA:3.40.50.2300 1 126 3.6E-40 T 11-10-2018 VSVS12_02253 41f3e763d71d01f72742144885300d23 126 SUPERFAMILY SSF52172 3 124 7.54E-38 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_02253 41f3e763d71d01f72742144885300d23 126 SMART SM00448 5 119 6.2E-35 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_02661 dfe0b49bb33ac73da927a56389e1e521 68 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 63 2.0E-28 T 11-10-2018 IPR009491 Protein of unknown function DUF1107 VSVS12_02661 dfe0b49bb33ac73da927a56389e1e521 68 Gene3D G3DSA:3.30.1910.10 1 63 9.4E-30 T 11-10-2018 VSVS12_02661 dfe0b49bb33ac73da927a56389e1e521 68 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 8.2E-29 T 11-10-2018 IPR009491 Protein of unknown function DUF1107 VSVS12_04244 427c0bb9ae7caa629ba5f03da110992d 212 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 2 198 37.508 T 11-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 VSVS12_04244 427c0bb9ae7caa629ba5f03da110992d 212 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 130 144 - T 11-10-2018 IPR033694 Pyroglutamyl peptidase I, Cys active site MetaCyc: PWY-7942 VSVS12_04244 427c0bb9ae7caa629ba5f03da110992d 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 4 27 2.7E-44 T 11-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 VSVS12_04244 427c0bb9ae7caa629ba5f03da110992d 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 62 74 2.7E-44 T 11-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 VSVS12_04244 427c0bb9ae7caa629ba5f03da110992d 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 160 172 2.7E-44 T 11-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 VSVS12_04244 427c0bb9ae7caa629ba5f03da110992d 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 132 148 2.7E-44 T 11-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 VSVS12_04244 427c0bb9ae7caa629ba5f03da110992d 212 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 80 100 2.7E-44 T 11-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 VSVS12_04244 427c0bb9ae7caa629ba5f03da110992d 212 SUPERFAMILY SSF53182 1 203 8.5E-70 T 11-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 VSVS12_04244 427c0bb9ae7caa629ba5f03da110992d 212 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 69 85 - T 11-10-2018 IPR033693 Pyroglutamyl peptidase I, Glu active site MetaCyc: PWY-7942 VSVS12_04244 427c0bb9ae7caa629ba5f03da110992d 212 Gene3D G3DSA:3.40.630.20 1 212 4.6E-75 T 11-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 VSVS12_04244 427c0bb9ae7caa629ba5f03da110992d 212 PIRSF PIRSF015592 1 210 5.4E-79 T 11-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 VSVS12_04244 427c0bb9ae7caa629ba5f03da110992d 212 Pfam PF01470 Pyroglutamyl peptidase 2 199 9.9E-73 T 11-10-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like MetaCyc: PWY-7942 VSVS12_04244 427c0bb9ae7caa629ba5f03da110992d 212 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 3 210 1.1E-72 T 11-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 VSVS12_03603 3eafb7bea757630a6029632f21859250 334 Pfam PF01212 Beta-eliminating lyase 2 282 3.4E-99 T 11-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 VSVS12_03603 3eafb7bea757630a6029632f21859250 334 SUPERFAMILY SSF53383 1 327 6.65E-117 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VSVS12_03603 3eafb7bea757630a6029632f21859250 334 Gene3D G3DSA:3.40.640.10 1 243 1.6E-97 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VSVS12_03603 3eafb7bea757630a6029632f21859250 334 PIRSF PIRSF017617 1 334 3.3E-133 T 11-10-2018 IPR023603 Threonine aldolase VSVS12_03603 3eafb7bea757630a6029632f21859250 334 Gene3D G3DSA:3.90.1150.10 244 333 2.4E-23 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VSVS12_00696 b3158e21e9d43ebcf062f05a062586fa 541 Gene3D G3DSA:1.10.3720.10 284 540 1.9E-34 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_00696 b3158e21e9d43ebcf062f05a062586fa 541 SUPERFAMILY SSF161098 281 535 2.4E-39 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_00696 b3158e21e9d43ebcf062f05a062586fa 541 Gene3D G3DSA:1.10.3720.10 10 267 1.9E-53 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_00696 b3158e21e9d43ebcf062f05a062586fa 541 SUPERFAMILY SSF161098 7 258 2.09E-44 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_00696 b3158e21e9d43ebcf062f05a062586fa 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 68 261 1.8E-15 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VSVS12_00696 b3158e21e9d43ebcf062f05a062586fa 541 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 341 530 8.8E-7 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VSVS12_01690 de4ae66a1f0cd4fbb46ea6b5a53733a6 248 SUPERFAMILY SSF51206 22 161 2.23E-31 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like VSVS12_01690 de4ae66a1f0cd4fbb46ea6b5a53733a6 248 ProSitePatterns PS00042 Crp-type HTH domain signature. 194 217 - T 11-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 VSVS12_01690 de4ae66a1f0cd4fbb46ea6b5a53733a6 248 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 192 208 2.5E-11 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VSVS12_01690 de4ae66a1f0cd4fbb46ea6b5a53733a6 248 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 208 223 2.5E-11 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VSVS12_01690 de4ae66a1f0cd4fbb46ea6b5a53733a6 248 Gene3D G3DSA:1.10.10.10 164 246 3.3E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_01690 de4ae66a1f0cd4fbb46ea6b5a53733a6 248 Pfam PF00027 Cyclic nucleotide-binding domain 50 131 1.6E-15 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain VSVS12_01690 de4ae66a1f0cd4fbb46ea6b5a53733a6 248 Gene3D G3DSA:2.60.120.10 42 163 4.3E-49 T 11-10-2018 IPR014710 RmlC-like jelly roll fold VSVS12_01690 de4ae66a1f0cd4fbb46ea6b5a53733a6 248 SMART SM00419 186 234 4.3E-15 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VSVS12_01690 de4ae66a1f0cd4fbb46ea6b5a53733a6 248 Pfam PF13545 Crp-like helix-turn-helix domain 167 240 2.4E-17 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VSVS12_01690 de4ae66a1f0cd4fbb46ea6b5a53733a6 248 SUPERFAMILY SSF46785 164 243 3.13E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_01690 de4ae66a1f0cd4fbb46ea6b5a53733a6 248 SMART SM00100 29 150 1.4E-20 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain VSVS12_00478 abc0a95d3b1f5f1fd7223b93a4e566e9 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 37.508 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00478 abc0a95d3b1f5f1fd7223b93a4e566e9 136 Gene3D G3DSA:3.90.1170.10 1 136 4.7E-54 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 VSVS12_00478 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 3.4E-40 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00478 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 3.4E-40 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00478 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 3.4E-40 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00478 abc0a95d3b1f5f1fd7223b93a4e566e9 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 3.4E-40 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00478 abc0a95d3b1f5f1fd7223b93a4e566e9 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 125 4.7E-57 T 11-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00478 abc0a95d3b1f5f1fd7223b93a4e566e9 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 11-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00478 abc0a95d3b1f5f1fd7223b93a4e566e9 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 8.8E-47 T 11-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 VSVS12_00478 abc0a95d3b1f5f1fd7223b93a4e566e9 136 SUPERFAMILY SSF54686 3 133 4.19E-53 T 11-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 VSVS12_02902 aa1f41677c2d44f51b09ca788370bb45 327 Pfam PF01145 SPFH domain / Band 7 family 22 244 3.8E-28 T 11-10-2018 IPR001107 Band 7 domain VSVS12_02902 aa1f41677c2d44f51b09ca788370bb45 327 SMART SM00244 18 219 5.8E-44 T 11-10-2018 IPR001107 Band 7 domain VSVS12_02902 aa1f41677c2d44f51b09ca788370bb45 327 SUPERFAMILY SSF117892 56 224 4.32E-22 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily VSVS12_02902 aa1f41677c2d44f51b09ca788370bb45 327 PIRSF PIRSF005651 1 327 1.5E-94 T 11-10-2018 IPR010200 HflC GO:0016021|GO:0052547 VSVS12_02902 aa1f41677c2d44f51b09ca788370bb45 327 TIGRFAM TIGR01932 hflC: HflC protein 1 319 5.6E-134 T 11-10-2018 IPR010200 HflC GO:0016021|GO:0052547 VSVS12_01337 c7947a7d8c80b7791d22f8fbb70b2c30 104 Pfam PF01527 Transposase 7 82 1.1E-14 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 VSVS12_01337 c7947a7d8c80b7791d22f8fbb70b2c30 104 Gene3D G3DSA:1.10.10.60 10 96 2.1E-9 T 11-10-2018 VSVS12_01337 c7947a7d8c80b7791d22f8fbb70b2c30 104 SUPERFAMILY SSF46689 6 99 4.66E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_02532 c7947a7d8c80b7791d22f8fbb70b2c30 104 Pfam PF01527 Transposase 7 82 1.1E-14 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 VSVS12_02532 c7947a7d8c80b7791d22f8fbb70b2c30 104 Gene3D G3DSA:1.10.10.60 10 96 2.1E-9 T 11-10-2018 VSVS12_02532 c7947a7d8c80b7791d22f8fbb70b2c30 104 SUPERFAMILY SSF46689 6 99 4.66E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_00648 577c177c52787063bb8615ebd6efc972 309 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VSVS12_00648 577c177c52787063bb8615ebd6efc972 309 Gene3D G3DSA:3.40.50.1370 8 304 1.6E-120 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VSVS12_00648 577c177c52787063bb8615ebd6efc972 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 2.1E-27 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VSVS12_00648 577c177c52787063bb8615ebd6efc972 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 2.1E-27 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VSVS12_00648 577c177c52787063bb8615ebd6efc972 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 2.1E-27 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VSVS12_00648 577c177c52787063bb8615ebd6efc972 309 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 2.1E-27 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VSVS12_00648 577c177c52787063bb8615ebd6efc972 309 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 9.9E-116 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VSVS12_00648 577c177c52787063bb8615ebd6efc972 309 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 5.8E-33 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 VSVS12_00648 577c177c52787063bb8615ebd6efc972 309 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 38.714 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VSVS12_00648 577c177c52787063bb8615ebd6efc972 309 SUPERFAMILY SSF53671 4 307 1.07E-102 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VSVS12_00648 577c177c52787063bb8615ebd6efc972 309 Gene3D G3DSA:3.40.50.1370 135 292 1.6E-120 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VSVS12_00648 577c177c52787063bb8615ebd6efc972 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 8.1E-38 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VSVS12_00648 577c177c52787063bb8615ebd6efc972 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 8.1E-38 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VSVS12_00648 577c177c52787063bb8615ebd6efc972 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 8.1E-38 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VSVS12_00648 577c177c52787063bb8615ebd6efc972 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 8.1E-38 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VSVS12_00648 577c177c52787063bb8615ebd6efc972 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 8.1E-38 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VSVS12_00648 577c177c52787063bb8615ebd6efc972 309 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 8.1E-38 T 11-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VSVS12_00648 577c177c52787063bb8615ebd6efc972 309 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 1.0E-44 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 VSVS12_02844 6e6e9af7bbbdd6fdbd2dc203179862e4 664 SUPERFAMILY SSF52922 533 664 2.49E-43 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VSVS12_02844 6e6e9af7bbbdd6fdbd2dc203179862e4 664 SUPERFAMILY SSF52518 348 527 1.83E-68 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold VSVS12_02844 6e6e9af7bbbdd6fdbd2dc203179862e4 664 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 663 0.0 T 11-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 VSVS12_02844 6e6e9af7bbbdd6fdbd2dc203179862e4 664 Gene3D G3DSA:3.40.50.920 538 664 6.5E-45 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VSVS12_02844 6e6e9af7bbbdd6fdbd2dc203179862e4 664 SMART SM00861 354 525 3.6E-68 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VSVS12_02844 6e6e9af7bbbdd6fdbd2dc203179862e4 664 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 333 9.3E-166 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VSVS12_02844 6e6e9af7bbbdd6fdbd2dc203179862e4 664 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VSVS12_02844 6e6e9af7bbbdd6fdbd2dc203179862e4 664 Gene3D G3DSA:3.40.50.970 1 325 1.8E-130 T 11-10-2018 VSVS12_02844 6e6e9af7bbbdd6fdbd2dc203179862e4 664 Gene3D G3DSA:3.40.50.970 326 537 6.3E-85 T 11-10-2018 VSVS12_02844 6e6e9af7bbbdd6fdbd2dc203179862e4 664 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 1.0E-47 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VSVS12_02844 6e6e9af7bbbdd6fdbd2dc203179862e4 664 Pfam PF02780 Transketolase, C-terminal domain 541 655 5.6E-20 T 11-10-2018 IPR033248 Transketolase, C-terminal domain VSVS12_02844 6e6e9af7bbbdd6fdbd2dc203179862e4 664 SUPERFAMILY SSF52518 6 319 4.36E-119 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold VSVS12_02844 6e6e9af7bbbdd6fdbd2dc203179862e4 664 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VSVS12_00486 461086f02b179e5f8517713a2e99997e 177 Pfam PF00347 Ribosomal protein L6 91 164 5.7E-19 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00486 461086f02b179e5f8517713a2e99997e 177 Pfam PF00347 Ribosomal protein L6 11 82 5.3E-20 T 11-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00486 461086f02b179e5f8517713a2e99997e 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 11-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00486 461086f02b179e5f8517713a2e99997e 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 1.7E-73 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VSVS12_00486 461086f02b179e5f8517713a2e99997e 177 PIRSF PIRSF002162 1 177 1.2E-43 T 11-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00486 461086f02b179e5f8517713a2e99997e 177 Gene3D G3DSA:3.90.930.12 1 82 1.9E-30 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00486 461086f02b179e5f8517713a2e99997e 177 Gene3D G3DSA:3.90.930.12 83 177 9.4E-39 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00486 461086f02b179e5f8517713a2e99997e 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 2.3E-33 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VSVS12_00486 461086f02b179e5f8517713a2e99997e 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 2.3E-33 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VSVS12_00486 461086f02b179e5f8517713a2e99997e 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 2.3E-33 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VSVS12_00486 461086f02b179e5f8517713a2e99997e 177 SUPERFAMILY SSF56053 1 82 1.09E-24 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00486 461086f02b179e5f8517713a2e99997e 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.397 T 11-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 VSVS12_00486 461086f02b179e5f8517713a2e99997e 177 SUPERFAMILY SSF56053 83 177 2.88E-35 T 11-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00901 064248d80a7da3aec7d7381a200451bc 269 SUPERFAMILY SSF53850 32 269 1.45E-80 T 11-10-2018 VSVS12_00901 064248d80a7da3aec7d7381a200451bc 269 Pfam PF03180 NLPA lipoprotein 33 269 3.2E-98 T 11-10-2018 IPR004872 Lipoprotein NlpA family VSVS12_00901 064248d80a7da3aec7d7381a200451bc 269 Gene3D G3DSA:3.40.190.10 115 219 1.3E-95 T 11-10-2018 VSVS12_00901 064248d80a7da3aec7d7381a200451bc 269 PIRSF PIRSF002854 1 269 1.2E-100 T 11-10-2018 IPR004872 Lipoprotein NlpA family VSVS12_00901 064248d80a7da3aec7d7381a200451bc 269 Gene3D G3DSA:3.40.190.10 34 263 1.3E-95 T 11-10-2018 VSVS12_00901 064248d80a7da3aec7d7381a200451bc 269 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 15 269 3.2E-127 T 11-10-2018 IPR004872 Lipoprotein NlpA family VSVS12_01809 bf34f6fa0e075215d6e79edbe1162e48 323 SUPERFAMILY SSF53850 28 322 4.98E-76 T 11-10-2018 VSVS12_01809 bf34f6fa0e075215d6e79edbe1162e48 323 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 1 321 1.5E-95 T 11-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family VSVS12_01809 bf34f6fa0e075215d6e79edbe1162e48 323 Gene3D G3DSA:3.40.190.10 119 257 2.9E-96 T 11-10-2018 VSVS12_01809 bf34f6fa0e075215d6e79edbe1162e48 323 Pfam PF16868 NMT1-like family 32 321 6.3E-90 T 11-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family VSVS12_01809 bf34f6fa0e075215d6e79edbe1162e48 323 Gene3D G3DSA:3.40.190.10 32 321 2.9E-96 T 11-10-2018 VSVS12_02759 6f99df5a42d0e79c70f8520220764ca4 346 SUPERFAMILY SSF52540 4 267 1.32E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02759 6f99df5a42d0e79c70f8520220764ca4 346 Hamap MF_00268 Protein RecA [recA]. 5 329 50.364 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VSVS12_02759 6f99df5a42d0e79c70f8520220764ca4 346 SUPERFAMILY SSF54752 269 325 1.15E-20 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal VSVS12_02759 6f99df5a42d0e79c70f8520220764ca4 346 SMART SM00382 57 228 4.7E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_02759 6f99df5a42d0e79c70f8520220764ca4 346 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 4 324 2.2E-169 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VSVS12_02759 6f99df5a42d0e79c70f8520220764ca4 346 Gene3D G3DSA:3.30.250.10 268 326 3.3E-25 T 11-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal VSVS12_02759 6f99df5a42d0e79c70f8520220764ca4 346 PRINTS PR00142 RecA protein signature 243 272 2.3E-83 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VSVS12_02759 6f99df5a42d0e79c70f8520220764ca4 346 PRINTS PR00142 RecA protein signature 93 122 2.3E-83 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VSVS12_02759 6f99df5a42d0e79c70f8520220764ca4 346 PRINTS PR00142 RecA protein signature 210 238 2.3E-83 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VSVS12_02759 6f99df5a42d0e79c70f8520220764ca4 346 PRINTS PR00142 RecA protein signature 127 156 2.3E-83 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VSVS12_02759 6f99df5a42d0e79c70f8520220764ca4 346 PRINTS PR00142 RecA protein signature 297 314 2.3E-83 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VSVS12_02759 6f99df5a42d0e79c70f8520220764ca4 346 PRINTS PR00142 RecA protein signature 165 194 2.3E-83 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VSVS12_02759 6f99df5a42d0e79c70f8520220764ca4 346 ProSitePatterns PS00321 recA signature. 213 221 - T 11-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 VSVS12_02759 6f99df5a42d0e79c70f8520220764ca4 346 Gene3D G3DSA:3.40.50.300 26 267 7.7E-82 T 11-10-2018 VSVS12_02759 6f99df5a42d0e79c70f8520220764ca4 346 Pfam PF00154 recA bacterial DNA recombination protein 7 267 5.7E-142 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VSVS12_03142 a4e8a18233b03e0c85216baacf42b707 298 PIRSF PIRSF001365 1 298 6.5E-67 T 11-10-2018 IPR002220 DapA-like GO:0016829 VSVS12_03142 a4e8a18233b03e0c85216baacf42b707 298 Gene3D G3DSA:3.20.20.70 1 298 7.3E-98 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_03142 a4e8a18233b03e0c85216baacf42b707 298 Pfam PF00701 Dihydrodipicolinate synthetase family 4 288 7.6E-50 T 11-10-2018 IPR002220 DapA-like GO:0016829 VSVS12_03142 a4e8a18233b03e0c85216baacf42b707 298 SMART SM01130 3 294 6.7E-61 T 11-10-2018 IPR002220 DapA-like GO:0016829 VSVS12_03142 a4e8a18233b03e0c85216baacf42b707 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 1.3E-7 T 11-10-2018 IPR002220 DapA-like GO:0016829 VSVS12_03142 a4e8a18233b03e0c85216baacf42b707 298 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 1.3E-7 T 11-10-2018 IPR002220 DapA-like GO:0016829 VSVS12_03142 a4e8a18233b03e0c85216baacf42b707 298 SUPERFAMILY SSF51569 1 295 9.84E-71 T 11-10-2018 VSVS12_04028 b3b79f9fd3f8e7ae2c3e5a2e59f00932 555 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 27 363 6.2E-26 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VSVS12_04028 b3b79f9fd3f8e7ae2c3e5a2e59f00932 555 Gene3D G3DSA:3.40.50.300 1 399 3.4E-27 T 11-10-2018 VSVS12_04028 b3b79f9fd3f8e7ae2c3e5a2e59f00932 555 SUPERFAMILY SSF52540 1 382 3.11E-24 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02330 9b16b61b72efe179ada18e6d83d8feec 377 Gene3D G3DSA:3.40.630.10 9 364 7.2E-128 T 11-10-2018 VSVS12_02330 9b16b61b72efe179ada18e6d83d8feec 377 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 4 377 52.138 T 11-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 VSVS12_02330 9b16b61b72efe179ada18e6d83d8feec 377 SUPERFAMILY SSF53187 6 375 4.19E-65 T 11-10-2018 VSVS12_02330 9b16b61b72efe179ada18e6d83d8feec 377 Pfam PF01546 Peptidase family M20/M25/M40 64 374 1.4E-43 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 VSVS12_02330 9b16b61b72efe179ada18e6d83d8feec 377 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 7 375 3.4E-181 T 11-10-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 VSVS12_02330 9b16b61b72efe179ada18e6d83d8feec 377 SUPERFAMILY SSF55031 181 290 4.19E-28 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VSVS12_02330 9b16b61b72efe179ada18e6d83d8feec 377 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 99 137 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VSVS12_02330 9b16b61b72efe179ada18e6d83d8feec 377 Gene3D G3DSA:3.30.70.360 181 294 7.2E-128 T 11-10-2018 VSVS12_02330 9b16b61b72efe179ada18e6d83d8feec 377 Pfam PF07687 Peptidase dimerisation domain 177 284 3.8E-22 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain VSVS12_00326 f031830ddfd81efa7df72297e0e313af 196 SUPERFAMILY SSF46689 5 78 2.33E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_00326 f031830ddfd81efa7df72297e0e313af 196 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 196 41.303 T 11-10-2018 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 VSVS12_00326 f031830ddfd81efa7df72297e0e313af 196 Gene3D G3DSA:1.10.357.10 3 196 9.0E-79 T 11-10-2018 VSVS12_00326 f031830ddfd81efa7df72297e0e313af 196 SUPERFAMILY SSF48498 81 195 5.34E-11 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VSVS12_00326 f031830ddfd81efa7df72297e0e313af 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 58 4.9E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VSVS12_00511 7a2d4841c699bb2c4e4b2d6cb40f08b6 152 Gene3D G3DSA:1.10.10.10 3 89 1.6E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_00511 7a2d4841c699bb2c4e4b2d6cb40f08b6 152 SUPERFAMILY SSF46785 12 144 4.68E-35 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_00511 7a2d4841c699bb2c4e4b2d6cb40f08b6 152 Pfam PF01475 Ferric uptake regulator family 20 138 1.8E-19 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 VSVS12_00511 7a2d4841c699bb2c4e4b2d6cb40f08b6 152 Gene3D G3DSA:3.30.1490.190 90 150 1.7E-17 T 11-10-2018 VSVS12_00903 e34939f39267420f4699dd27375c99a6 344 SMART SM00930 265 340 5.7E-28 T 11-10-2018 IPR018449 NIL domain VSVS12_00903 e34939f39267420f4699dd27375c99a6 344 Gene3D G3DSA:3.30.70.260 244 344 8.4E-40 T 11-10-2018 VSVS12_00903 e34939f39267420f4699dd27375c99a6 344 SMART SM00382 30 235 6.5E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_00903 e34939f39267420f4699dd27375c99a6 344 Pfam PF09383 NIL domain 268 339 6.2E-21 T 11-10-2018 IPR018449 NIL domain VSVS12_00903 e34939f39267420f4699dd27375c99a6 344 SUPERFAMILY SSF55021 248 343 1.13E-25 T 11-10-2018 VSVS12_00903 e34939f39267420f4699dd27375c99a6 344 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 5.3E-196 T 11-10-2018 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 VSVS12_00903 e34939f39267420f4699dd27375c99a6 344 Gene3D G3DSA:3.40.50.300 1 232 4.0E-73 T 11-10-2018 VSVS12_00903 e34939f39267420f4699dd27375c99a6 344 Pfam PF00005 ABC transporter 23 169 1.4E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_00903 e34939f39267420f4699dd27375c99a6 344 SUPERFAMILY SSF52540 1 239 8.17E-81 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00903 e34939f39267420f4699dd27375c99a6 344 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_02963 971df9855ad2e02958c80e4713f52887 460 Pfam PF00672 HAMP domain 190 235 1.1E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_02963 971df9855ad2e02958c80e4713f52887 460 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 349 458 2.7E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_02963 971df9855ad2e02958c80e4713f52887 460 SMART SM00304 189 242 2.9E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_02963 971df9855ad2e02958c80e4713f52887 460 Pfam PF00512 His Kinase A (phospho-acceptor) domain 245 303 3.5E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_02963 971df9855ad2e02958c80e4713f52887 460 Gene3D G3DSA:3.30.565.10 309 458 5.2E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_02963 971df9855ad2e02958c80e4713f52887 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 1.8E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_02963 971df9855ad2e02958c80e4713f52887 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 456 1.8E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_02963 971df9855ad2e02958c80e4713f52887 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 412 1.8E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_02963 971df9855ad2e02958c80e4713f52887 460 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 398 1.8E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_02963 971df9855ad2e02958c80e4713f52887 460 SMART SM00388 243 305 1.7E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_02963 971df9855ad2e02958c80e4713f52887 460 SUPERFAMILY SSF47384 228 303 1.96E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VSVS12_02963 971df9855ad2e02958c80e4713f52887 460 Gene3D G3DSA:3.30.450.210 31 156 1.4E-45 T 11-10-2018 IPR038515 CpxA, periplasmic domain superfamily VSVS12_02963 971df9855ad2e02958c80e4713f52887 460 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 36 167 3.0E-45 T 11-10-2018 IPR032404 Two-component sensor protein CpxA, periplasmic domain VSVS12_02963 971df9855ad2e02958c80e4713f52887 460 SUPERFAMILY SSF55874 295 457 3.41E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_02963 971df9855ad2e02958c80e4713f52887 460 Gene3D G3DSA:1.10.287.130 193 306 2.0E-33 T 11-10-2018 VSVS12_02963 971df9855ad2e02958c80e4713f52887 460 SMART SM00387 349 459 1.0E-30 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_01540 ff29a62f5bf438e089b1e20b0bae2456 802 SUPERFAMILY SSF102114 371 605 3.4E-10 T 11-10-2018 VSVS12_01540 ff29a62f5bf438e089b1e20b0bae2456 802 SMART SM00729 367 617 1.4E-4 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VSVS12_01540 ff29a62f5bf438e089b1e20b0bae2456 802 Pfam PF08497 Radical SAM N-terminal 24 370 6.9E-141 T 11-10-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal VSVS12_01540 ff29a62f5bf438e089b1e20b0bae2456 802 Pfam PF04055 Radical SAM superfamily 371 576 1.3E-18 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VSVS12_01540 ff29a62f5bf438e089b1e20b0bae2456 802 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 24 636 3.2E-260 T 11-10-2018 IPR022946 Uncharacterised protein family UPF0313 VSVS12_01540 ff29a62f5bf438e089b1e20b0bae2456 802 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 371 391 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 VSVS12_01540 ff29a62f5bf438e089b1e20b0bae2456 802 Gene3D G3DSA:3.80.30.20 366 631 1.1E-12 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VSVS12_01540 ff29a62f5bf438e089b1e20b0bae2456 802 Pfam PF11842 Domain of unknown function (DUF3362) 585 737 5.0E-41 T 11-10-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal VSVS12_01540 ff29a62f5bf438e089b1e20b0bae2456 802 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 24 638 48.892 T 11-10-2018 IPR022946 Uncharacterised protein family UPF0313 VSVS12_01493 33906ef14230476662e06b0def45a04c 281 Pfam PF12833 Helix-turn-helix domain 188 269 6.1E-19 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VSVS12_01493 33906ef14230476662e06b0def45a04c 281 SMART SM00342 182 267 6.8E-12 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VSVS12_01493 33906ef14230476662e06b0def45a04c 281 Gene3D G3DSA:1.10.10.60 166 272 1.4E-20 T 11-10-2018 VSVS12_01493 33906ef14230476662e06b0def45a04c 281 SUPERFAMILY SSF46689 180 216 8.24E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_00349 4ef0f8438184375fdf77ae9d6c92debd 306 Gene3D G3DSA:3.40.50.2000 1 114 1.6E-29 T 11-10-2018 VSVS12_00349 4ef0f8438184375fdf77ae9d6c92debd 306 SUPERFAMILY SSF55729 163 299 7.33E-16 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_00349 4ef0f8438184375fdf77ae9d6c92debd 306 Gene3D G3DSA:3.40.630.30 162 301 1.7E-15 T 11-10-2018 VSVS12_00349 4ef0f8438184375fdf77ae9d6c92debd 306 Pfam PF13302 Acetyltransferase (GNAT) domain 165 290 5.2E-10 T 11-10-2018 IPR000182 GNAT domain VSVS12_00349 4ef0f8438184375fdf77ae9d6c92debd 306 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 22 125 2.5E-6 T 11-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 VSVS12_00349 4ef0f8438184375fdf77ae9d6c92debd 306 SUPERFAMILY SSF53756 9 151 3.77E-11 T 11-10-2018 VSVS12_02834 2bb4bc01724b4ded58546d24031c3591 253 SMART SM01134 73 234 1.6E-54 T 11-10-2018 VSVS12_02834 2bb4bc01724b4ded58546d24031c3591 253 Pfam PF08220 DeoR-like helix-turn-helix domain 9 62 9.8E-16 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VSVS12_02834 2bb4bc01724b4ded58546d24031c3591 253 Gene3D G3DSA:1.10.10.10 1 56 5.5E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_02834 2bb4bc01724b4ded58546d24031c3591 253 SUPERFAMILY SSF100950 79 233 6.7E-31 T 11-10-2018 IPR037171 NagB/RpiA transferase-like VSVS12_02834 2bb4bc01724b4ded58546d24031c3591 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 9 43 - T 11-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VSVS12_02834 2bb4bc01724b4ded58546d24031c3591 253 SMART SM00420 9 61 5.1E-14 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VSVS12_02834 2bb4bc01724b4ded58546d24031c3591 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 4.6E-6 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VSVS12_02834 2bb4bc01724b4ded58546d24031c3591 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 4.6E-6 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VSVS12_02834 2bb4bc01724b4ded58546d24031c3591 253 SUPERFAMILY SSF46785 4 65 1.11E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_02834 2bb4bc01724b4ded58546d24031c3591 253 Pfam PF00455 DeoR C terminal sensor domain 78 232 8.3E-42 T 11-10-2018 IPR014036 DeoR C-terminal sensor domain VSVS12_00667 61cae6e1061e1f976f71a2a1879ccd14 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 103 298 4.4E-10 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VSVS12_00667 61cae6e1061e1f976f71a2a1879ccd14 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 360 426 3.0E-6 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VSVS12_00667 61cae6e1061e1f976f71a2a1879ccd14 887 SUPERFAMILY SSF52518 474 701 1.65E-97 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold VSVS12_00667 61cae6e1061e1f976f71a2a1879ccd14 887 SUPERFAMILY SSF52922 702 886 1.32E-58 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VSVS12_00667 61cae6e1061e1f976f71a2a1879ccd14 887 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 4 886 0.0 T 11-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 VSVS12_00667 61cae6e1061e1f976f71a2a1879ccd14 887 PIRSF PIRSF000156 1 887 0.0 T 11-10-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 VSVS12_00667 61cae6e1061e1f976f71a2a1879ccd14 887 Gene3D G3DSA:3.40.50.970 472 706 1.4E-111 T 11-10-2018 VSVS12_00667 61cae6e1061e1f976f71a2a1879ccd14 887 Gene3D G3DSA:3.40.50.920 707 887 8.6E-71 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VSVS12_00667 61cae6e1061e1f976f71a2a1879ccd14 887 SUPERFAMILY SSF52518 56 469 3.63E-140 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold VSVS12_00667 61cae6e1061e1f976f71a2a1879ccd14 887 Gene3D G3DSA:3.40.50.970 55 471 1.6E-133 T 11-10-2018 VSVS12_00207 1d401ac26b7b1f91da02131732096876 468 Pfam PF00308 Bacterial dnaA protein 134 350 2.4E-97 T 11-10-2018 IPR013317 Chromosomal replication initiator protein DnaA VSVS12_00207 1d401ac26b7b1f91da02131732096876 468 SUPERFAMILY SSF48295 364 467 2.88E-37 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 VSVS12_00207 1d401ac26b7b1f91da02131732096876 468 Gene3D G3DSA:1.10.8.60 299 369 1.6E-24 T 11-10-2018 VSVS12_00207 1d401ac26b7b1f91da02131732096876 468 Gene3D G3DSA:3.40.50.300 118 297 1.0E-49 T 11-10-2018 VSVS12_00207 1d401ac26b7b1f91da02131732096876 468 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 467 34.326 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 VSVS12_00207 1d401ac26b7b1f91da02131732096876 468 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 466 8.2E-187 T 11-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 VSVS12_00207 1d401ac26b7b1f91da02131732096876 468 SUPERFAMILY SSF52540 133 344 8.92E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00207 1d401ac26b7b1f91da02131732096876 468 SMART SM00382 165 378 3.6E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_00207 1d401ac26b7b1f91da02131732096876 468 Gene3D G3DSA:1.10.1750.10 375 468 8.2E-39 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 VSVS12_00207 1d401ac26b7b1f91da02131732096876 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 166 186 1.8E-54 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like VSVS12_00207 1d401ac26b7b1f91da02131732096876 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 198 212 1.8E-54 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like VSVS12_00207 1d401ac26b7b1f91da02131732096876 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 230 244 1.8E-54 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like VSVS12_00207 1d401ac26b7b1f91da02131732096876 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 264 291 1.8E-54 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like VSVS12_00207 1d401ac26b7b1f91da02131732096876 468 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 426 445 1.8E-54 T 11-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like VSVS12_00207 1d401ac26b7b1f91da02131732096876 468 Pfam PF11638 DnaA N-terminal domain 4 65 4.8E-20 T 11-10-2018 IPR024633 DnaA N-terminal domain VSVS12_00207 1d401ac26b7b1f91da02131732096876 468 Gene3D G3DSA:3.30.300.180 2 115 6.1E-42 T 11-10-2018 IPR038454 DnaA, N-terminal domain superfamily VSVS12_00207 1d401ac26b7b1f91da02131732096876 468 ProSitePatterns PS01008 DnaA protein signature. 426 445 - T 11-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 VSVS12_00207 1d401ac26b7b1f91da02131732096876 468 SMART SM00760 376 445 9.0E-45 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 VSVS12_00207 1d401ac26b7b1f91da02131732096876 468 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 377 445 3.6E-32 T 11-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 VSVS12_00316 2bd37829e688721942e55e19f1972b66 90 Gene3D G3DSA:3.90.940.10 1 90 2.1E-29 T 11-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 VSVS12_00316 2bd37829e688721942e55e19f1972b66 90 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 5.4E-29 T 11-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VSVS12_00316 2bd37829e688721942e55e19f1972b66 90 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.791 T 11-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VSVS12_00316 2bd37829e688721942e55e19f1972b66 90 SUPERFAMILY SSF63562 1 78 1.44E-25 T 11-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 VSVS12_00316 2bd37829e688721942e55e19f1972b66 90 Pfam PF01192 RNA polymerase Rpb6 10 60 5.7E-18 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 VSVS12_00316 2bd37829e688721942e55e19f1972b66 90 SMART SM01409 8 61 2.5E-16 T 11-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 VSVS12_02294 2a7facb30559b07d7c45c6fd69a78632 291 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 94 289 3.1E-81 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VSVS12_02294 2a7facb30559b07d7c45c6fd69a78632 291 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 263 288 1.3E-65 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VSVS12_02294 2a7facb30559b07d7c45c6fd69a78632 291 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 131 150 1.3E-65 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VSVS12_02294 2a7facb30559b07d7c45c6fd69a78632 291 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 218 238 1.3E-65 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VSVS12_02294 2a7facb30559b07d7c45c6fd69a78632 291 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 239 260 1.3E-65 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VSVS12_02294 2a7facb30559b07d7c45c6fd69a78632 291 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 111 131 1.3E-65 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VSVS12_02294 2a7facb30559b07d7c45c6fd69a78632 291 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 92 111 1.3E-65 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VSVS12_02294 2a7facb30559b07d7c45c6fd69a78632 291 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 190 202 8.3E-17 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VSVS12_02294 2a7facb30559b07d7c45c6fd69a78632 291 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 162 176 8.3E-17 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VSVS12_02294 2a7facb30559b07d7c45c6fd69a78632 291 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 279 289 8.3E-17 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VSVS12_02294 2a7facb30559b07d7c45c6fd69a78632 291 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 90 99 8.3E-17 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VSVS12_02294 2a7facb30559b07d7c45c6fd69a78632 291 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 150 162 8.3E-17 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VSVS12_02294 2a7facb30559b07d7c45c6fd69a78632 291 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 211 223 8.3E-17 T 11-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 VSVS12_02294 2a7facb30559b07d7c45c6fd69a78632 291 Pfam PF00813 FliP family 94 285 6.2E-79 T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VSVS12_02294 2a7facb30559b07d7c45c6fd69a78632 291 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 266 278 - T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VSVS12_02294 2a7facb30559b07d7c45c6fd69a78632 291 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 218 233 - T 11-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 VSVS12_01594 43c2bcffb872c9c7b92287bd69a2af44 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 401 419 2.7E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_01594 43c2bcffb872c9c7b92287bd69a2af44 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 437 2.7E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_01594 43c2bcffb872c9c7b92287bd69a2af44 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 382 2.7E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_01594 43c2bcffb872c9c7b92287bd69a2af44 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 396 2.7E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_01594 43c2bcffb872c9c7b92287bd69a2af44 440 Gene3D G3DSA:3.30.565.10 288 437 3.2E-31 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_01594 43c2bcffb872c9c7b92287bd69a2af44 440 Gene3D G3DSA:1.10.287.130 269 287 3.2E-31 T 11-10-2018 VSVS12_01594 43c2bcffb872c9c7b92287bd69a2af44 440 Pfam PF00027 Cyclic nucleotide-binding domain 23 100 1.3E-8 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain VSVS12_01594 43c2bcffb872c9c7b92287bd69a2af44 440 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 330 438 1.0E-14 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_01594 43c2bcffb872c9c7b92287bd69a2af44 440 SUPERFAMILY SSF55874 294 438 9.17E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_01594 43c2bcffb872c9c7b92287bd69a2af44 440 SUPERFAMILY SSF51206 19 132 1.31E-12 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like VSVS12_01594 43c2bcffb872c9c7b92287bd69a2af44 440 SMART SM00387 329 440 1.3E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_01594 43c2bcffb872c9c7b92287bd69a2af44 440 Gene3D G3DSA:2.60.120.10 5 135 1.7E-9 T 11-10-2018 IPR014710 RmlC-like jelly roll fold VSVS12_03382 248e3ac205c59ca187e4dd1558d3a864 220 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 190 4.3E-29 T 11-10-2018 VSVS12_03382 248e3ac205c59ca187e4dd1558d3a864 220 Gene3D G3DSA:3.40.50.1000 6 215 1.9E-56 T 11-10-2018 IPR023214 HAD superfamily VSVS12_03382 248e3ac205c59ca187e4dd1558d3a864 220 SUPERFAMILY SSF56784 1 210 5.65E-32 T 11-10-2018 IPR036412 HAD-like superfamily VSVS12_03382 248e3ac205c59ca187e4dd1558d3a864 220 Gene3D G3DSA:1.20.1440.100 17 90 1.9E-56 T 11-10-2018 VSVS12_03382 248e3ac205c59ca187e4dd1558d3a864 220 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 5 204 5.4E-52 T 11-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like VSVS12_03382 248e3ac205c59ca187e4dd1558d3a864 220 Pfam PF12710 haloacid dehalogenase-like hydrolase 7 189 4.9E-29 T 11-10-2018 VSVS12_02472 b8deeb811b837afa9e2cc556166d3c8b 232 Gene3D G3DSA:1.20.58.220 1 117 8.2E-42 T 11-10-2018 IPR038078 PhoU-like domain superfamily VSVS12_02472 b8deeb811b837afa9e2cc556166d3c8b 232 Gene3D G3DSA:1.20.58.220 118 229 3.9E-32 T 11-10-2018 IPR038078 PhoU-like domain superfamily VSVS12_02472 b8deeb811b837afa9e2cc556166d3c8b 232 Pfam PF01895 PhoU domain 23 109 2.4E-22 T 11-10-2018 IPR026022 PhoU domain VSVS12_02472 b8deeb811b837afa9e2cc556166d3c8b 232 Pfam PF01895 PhoU domain 128 210 6.3E-15 T 11-10-2018 IPR026022 PhoU domain VSVS12_02472 b8deeb811b837afa9e2cc556166d3c8b 232 PIRSF PIRSF003107 4 223 6.4E-70 T 11-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 VSVS12_02472 b8deeb811b837afa9e2cc556166d3c8b 232 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 10 219 3.5E-75 T 11-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 VSVS12_02472 b8deeb811b837afa9e2cc556166d3c8b 232 SUPERFAMILY SSF109755 10 225 8.06E-70 T 11-10-2018 VSVS12_02639 25653fe4aa8cf32df2466955e23a6eba 433 Gene3D G3DSA:3.30.390.10 1 127 1.0E-54 T 11-10-2018 IPR029017 Enolase-like, N-terminal VSVS12_02639 25653fe4aa8cf32df2466955e23a6eba 433 SMART SM01193 4 134 9.1E-92 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VSVS12_02639 25653fe4aa8cf32df2466955e23a6eba 433 SUPERFAMILY SSF54826 3 138 3.36E-56 T 11-10-2018 VSVS12_02639 25653fe4aa8cf32df2466955e23a6eba 433 Gene3D G3DSA:3.20.20.120 128 433 9.6E-132 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VSVS12_02639 25653fe4aa8cf32df2466955e23a6eba 433 SMART SM01192 143 431 4.2E-212 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VSVS12_02639 25653fe4aa8cf32df2466955e23a6eba 433 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 429 2.7E-205 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VSVS12_02639 25653fe4aa8cf32df2466955e23a6eba 433 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 430 4.8E-136 T 11-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VSVS12_02639 25653fe4aa8cf32df2466955e23a6eba 433 SUPERFAMILY SSF51604 143 428 8.43E-126 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VSVS12_02639 25653fe4aa8cf32df2466955e23a6eba 433 Hamap MF_00318 Enolase [eno]. 2 417 44.261 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VSVS12_02639 25653fe4aa8cf32df2466955e23a6eba 433 Pfam PF03952 Enolase, N-terminal domain 4 134 5.0E-58 T 11-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VSVS12_02639 25653fe4aa8cf32df2466955e23a6eba 433 PIRSF PIRSF001400 1 431 4.5E-191 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VSVS12_02639 25653fe4aa8cf32df2466955e23a6eba 433 PRINTS PR00148 Enolase signature 369 386 4.0E-44 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VSVS12_02639 25653fe4aa8cf32df2466955e23a6eba 433 PRINTS PR00148 Enolase signature 317 328 4.0E-44 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VSVS12_02639 25653fe4aa8cf32df2466955e23a6eba 433 PRINTS PR00148 Enolase signature 165 178 4.0E-44 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VSVS12_02639 25653fe4aa8cf32df2466955e23a6eba 433 PRINTS PR00148 Enolase signature 340 354 4.0E-44 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VSVS12_02639 25653fe4aa8cf32df2466955e23a6eba 433 PRINTS PR00148 Enolase signature 37 51 4.0E-44 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VSVS12_02639 25653fe4aa8cf32df2466955e23a6eba 433 PRINTS PR00148 Enolase signature 107 123 4.0E-44 T 11-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VSVS12_02639 25653fe4aa8cf32df2466955e23a6eba 433 ProSitePatterns PS00164 Enolase signature. 340 353 - T 11-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_00081 5797062e0af87050c46a62871b613339 451 Gene3D G3DSA:3.50.50.60 144 261 2.7E-123 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_00081 5797062e0af87050c46a62871b613339 451 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 340 450 4.3E-33 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VSVS12_00081 5797062e0af87050c46a62871b613339 451 SUPERFAMILY SSF51905 1 366 1.04E-57 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_00081 5797062e0af87050c46a62871b613339 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 2.3E-29 T 11-10-2018 VSVS12_00081 5797062e0af87050c46a62871b613339 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 2.3E-29 T 11-10-2018 VSVS12_00081 5797062e0af87050c46a62871b613339 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 2.3E-29 T 11-10-2018 VSVS12_00081 5797062e0af87050c46a62871b613339 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.3E-29 T 11-10-2018 VSVS12_00081 5797062e0af87050c46a62871b613339 451 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 2.3E-29 T 11-10-2018 VSVS12_00081 5797062e0af87050c46a62871b613339 451 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 319 1.5E-69 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VSVS12_00081 5797062e0af87050c46a62871b613339 451 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 4 451 1.7E-211 T 11-10-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 VSVS12_00081 5797062e0af87050c46a62871b613339 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 6.1E-63 T 11-10-2018 VSVS12_00081 5797062e0af87050c46a62871b613339 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 6.1E-63 T 11-10-2018 VSVS12_00081 5797062e0af87050c46a62871b613339 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 336 357 6.1E-63 T 11-10-2018 VSVS12_00081 5797062e0af87050c46a62871b613339 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 6.1E-63 T 11-10-2018 VSVS12_00081 5797062e0af87050c46a62871b613339 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 6.1E-63 T 11-10-2018 VSVS12_00081 5797062e0af87050c46a62871b613339 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 6.1E-63 T 11-10-2018 VSVS12_00081 5797062e0af87050c46a62871b613339 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 425 445 6.1E-63 T 11-10-2018 VSVS12_00081 5797062e0af87050c46a62871b613339 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 6.1E-63 T 11-10-2018 VSVS12_00081 5797062e0af87050c46a62871b613339 451 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 403 418 6.1E-63 T 11-10-2018 VSVS12_00081 5797062e0af87050c46a62871b613339 451 SUPERFAMILY SSF55424 337 451 2.58E-35 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VSVS12_00081 5797062e0af87050c46a62871b613339 451 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 VSVS12_00081 5797062e0af87050c46a62871b613339 451 Gene3D G3DSA:3.50.50.60 5 315 2.7E-123 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_00081 5797062e0af87050c46a62871b613339 451 Gene3D G3DSA:3.30.390.30 339 451 1.0E-46 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VSVS12_00081 5797062e0af87050c46a62871b613339 451 PIRSF PIRSF000350 1 445 4.8E-83 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 VSVS12_01969 142136f2c9421f5f4006a17b2b10871e 138 SUPERFAMILY SSF55298 14 128 8.8E-29 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VSVS12_01969 142136f2c9421f5f4006a17b2b10871e 138 Gene3D G3DSA:3.30.1330.40 5 133 7.0E-28 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VSVS12_01969 142136f2c9421f5f4006a17b2b10871e 138 Pfam PF01042 Endoribonuclease L-PSP 17 126 2.2E-21 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 VSVS12_02891 ddad28969766cfb5ed5d9be65f11eebe 699 SMART SM00889 485 603 1.2E-74 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VSVS12_02891 ddad28969766cfb5ed5d9be65f11eebe 699 Hamap MF_00054_B Elongation factor G [fusA]. 6 697 112.004 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VSVS12_02891 ddad28969766cfb5ed5d9be65f11eebe 699 Gene3D G3DSA:2.40.30.10 299 405 2.4E-46 T 11-10-2018 VSVS12_02891 ddad28969766cfb5ed5d9be65f11eebe 699 PRINTS PR00315 GTP-binding elongation factor signature 58 66 7.1E-17 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_02891 ddad28969766cfb5ed5d9be65f11eebe 699 PRINTS PR00315 GTP-binding elongation factor signature 101 112 7.1E-17 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_02891 ddad28969766cfb5ed5d9be65f11eebe 699 PRINTS PR00315 GTP-binding elongation factor signature 85 95 7.1E-17 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_02891 ddad28969766cfb5ed5d9be65f11eebe 699 PRINTS PR00315 GTP-binding elongation factor signature 137 146 7.1E-17 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_02891 ddad28969766cfb5ed5d9be65f11eebe 699 PRINTS PR00315 GTP-binding elongation factor signature 12 25 7.1E-17 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_02891 ddad28969766cfb5ed5d9be65f11eebe 699 Gene3D G3DSA:3.30.70.240 609 680 3.7E-91 T 11-10-2018 VSVS12_02891 ddad28969766cfb5ed5d9be65f11eebe 699 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 4.2E-67 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_02891 ddad28969766cfb5ed5d9be65f11eebe 699 Gene3D G3DSA:3.30.70.870 410 488 2.7E-31 T 11-10-2018 VSVS12_02891 ddad28969766cfb5ed5d9be65f11eebe 699 SUPERFAMILY SSF54211 484 604 3.54E-46 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VSVS12_02891 ddad28969766cfb5ed5d9be65f11eebe 699 SUPERFAMILY SSF54980 608 695 3.02E-30 T 11-10-2018 IPR035647 EF-G domain III/V-like VSVS12_02891 ddad28969766cfb5ed5d9be65f11eebe 699 Pfam PF03144 Elongation factor Tu domain 2 329 396 1.1E-17 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VSVS12_02891 ddad28969766cfb5ed5d9be65f11eebe 699 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site VSVS12_02891 ddad28969766cfb5ed5d9be65f11eebe 699 SUPERFAMILY SSF52540 6 288 1.67E-106 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02891 ddad28969766cfb5ed5d9be65f11eebe 699 SMART SM00838 605 693 3.9E-57 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like VSVS12_02891 ddad28969766cfb5ed5d9be65f11eebe 699 Gene3D G3DSA:3.30.230.10 489 693 3.7E-91 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VSVS12_02891 ddad28969766cfb5ed5d9be65f11eebe 699 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 697 0.0 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VSVS12_02891 ddad28969766cfb5ed5d9be65f11eebe 699 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 187 6.1E-35 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VSVS12_02891 ddad28969766cfb5ed5d9be65f11eebe 699 Pfam PF00679 Elongation factor G C-terminus 605 691 2.2E-31 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like VSVS12_02891 ddad28969766cfb5ed5d9be65f11eebe 699 Gene3D G3DSA:3.40.50.300 1 298 2.8E-116 T 11-10-2018 VSVS12_02891 ddad28969766cfb5ed5d9be65f11eebe 699 SUPERFAMILY SSF50447 271 409 1.1E-35 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VSVS12_02891 ddad28969766cfb5ed5d9be65f11eebe 699 Pfam PF03764 Elongation factor G, domain IV 484 603 6.8E-48 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VSVS12_02891 ddad28969766cfb5ed5d9be65f11eebe 699 Pfam PF14492 Elongation Factor G, domain II 409 483 2.2E-32 T 11-10-2018 VSVS12_02891 ddad28969766cfb5ed5d9be65f11eebe 699 SUPERFAMILY SSF54980 407 485 2.52E-24 T 11-10-2018 IPR035647 EF-G domain III/V-like VSVS12_01937 76f57abdf90311395c691b3897587de7 35 Pfam PF01625 Peptide methionine sulfoxide reductase 3 34 1.1E-9 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VSVS12_01937 76f57abdf90311395c691b3897587de7 35 Gene3D G3DSA:3.30.1060.10 1 35 2.2E-9 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VSVS12_01937 76f57abdf90311395c691b3897587de7 35 SUPERFAMILY SSF55068 1 34 7.46E-12 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VSVS12_00782 273ddd27f4d2fb424827fdeead46ca9c 392 Pfam PF00800 Prephenate dehydratase 110 291 8.8E-58 T 11-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 VSVS12_00782 273ddd27f4d2fb424827fdeead46ca9c 392 Pfam PF01817 Chorismate mutase type II 12 91 7.4E-17 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VSVS12_00782 273ddd27f4d2fb424827fdeead46ca9c 392 Gene3D G3DSA:3.40.190.10 112 285 4.3E-53 T 11-10-2018 VSVS12_00782 273ddd27f4d2fb424827fdeead46ca9c 392 PIRSF PIRSF001500 1 384 6.5E-142 T 11-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 VSVS12_00782 273ddd27f4d2fb424827fdeead46ca9c 392 SMART SM00830 12 93 7.6E-22 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VSVS12_00782 273ddd27f4d2fb424827fdeead46ca9c 392 SUPERFAMILY SSF53850 109 295 1.04E-54 T 11-10-2018 VSVS12_00782 273ddd27f4d2fb424827fdeead46ca9c 392 Gene3D G3DSA:3.30.70.260 296 383 8.9E-25 T 11-10-2018 VSVS12_00782 273ddd27f4d2fb424827fdeead46ca9c 392 SUPERFAMILY SSF48600 7 95 6.96E-20 T 11-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VSVS12_00782 273ddd27f4d2fb424827fdeead46ca9c 392 Gene3D G3DSA:3.40.190.10 193 278 4.3E-53 T 11-10-2018 VSVS12_00782 273ddd27f4d2fb424827fdeead46ca9c 392 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 329 336 - T 11-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 VSVS12_00782 273ddd27f4d2fb424827fdeead46ca9c 392 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 265 287 - T 11-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 VSVS12_00782 273ddd27f4d2fb424827fdeead46ca9c 392 Gene3D G3DSA:1.20.59.10 2 111 2.5E-31 T 11-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VSVS12_00782 273ddd27f4d2fb424827fdeead46ca9c 392 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 9 91 1.3E-28 T 11-10-2018 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 VSVS12_00782 273ddd27f4d2fb424827fdeead46ca9c 392 SUPERFAMILY SSF55021 284 381 7.2E-26 T 11-10-2018 VSVS12_01725 51a77ec45f9d504eabad26ceb7489168 195 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 5 190 29.939 T 11-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 VSVS12_01725 51a77ec45f9d504eabad26ceb7489168 195 Pfam PF12804 MobA-like NTP transferase domain 10 158 3.4E-33 T 11-10-2018 IPR025877 MobA-like NTP transferase VSVS12_01725 51a77ec45f9d504eabad26ceb7489168 195 Gene3D G3DSA:3.90.550.10 3 192 4.0E-56 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VSVS12_01725 51a77ec45f9d504eabad26ceb7489168 195 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 8 188 8.5E-72 T 11-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 VSVS12_01725 51a77ec45f9d504eabad26ceb7489168 195 SUPERFAMILY SSF53448 7 189 7.04E-34 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VSVS12_03348 4150d1a12813fcea8a669a06c70d6dda 236 Gene3D G3DSA:3.30.930.10 17 236 3.4E-43 T 11-10-2018 VSVS12_03348 4150d1a12813fcea8a669a06c70d6dda 236 SUPERFAMILY SSF55681 9 235 3.65E-44 T 11-10-2018 VSVS12_04392 a46b47102e1e8e4a13d96b784e79ce85 358 Pfam PF00005 ABC transporter 22 163 4.7E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_04392 a46b47102e1e8e4a13d96b784e79ce85 358 Gene3D G3DSA:2.40.50.940 224 352 1.8E-11 T 11-10-2018 VSVS12_04392 a46b47102e1e8e4a13d96b784e79ce85 358 SUPERFAMILY SSF52540 5 243 2.1E-80 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_04392 a46b47102e1e8e4a13d96b784e79ce85 358 SUPERFAMILY SSF50331 239 352 2.34E-8 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VSVS12_04392 a46b47102e1e8e4a13d96b784e79ce85 358 Gene3D G3DSA:3.40.50.300 5 223 2.5E-61 T 11-10-2018 VSVS12_04392 a46b47102e1e8e4a13d96b784e79ce85 358 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_04392 a46b47102e1e8e4a13d96b784e79ce85 358 SMART SM00382 30 213 2.8E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_04392 a46b47102e1e8e4a13d96b784e79ce85 358 Gene3D G3DSA:2.40.50.140 288 347 1.8E-11 T 11-10-2018 VSVS12_04518 a46b47102e1e8e4a13d96b784e79ce85 358 Pfam PF00005 ABC transporter 22 163 4.7E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_04518 a46b47102e1e8e4a13d96b784e79ce85 358 Gene3D G3DSA:2.40.50.940 224 352 1.8E-11 T 11-10-2018 VSVS12_04518 a46b47102e1e8e4a13d96b784e79ce85 358 SUPERFAMILY SSF52540 5 243 2.1E-80 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_04518 a46b47102e1e8e4a13d96b784e79ce85 358 SUPERFAMILY SSF50331 239 352 2.34E-8 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VSVS12_04518 a46b47102e1e8e4a13d96b784e79ce85 358 Gene3D G3DSA:3.40.50.300 5 223 2.5E-61 T 11-10-2018 VSVS12_04518 a46b47102e1e8e4a13d96b784e79ce85 358 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_04518 a46b47102e1e8e4a13d96b784e79ce85 358 SMART SM00382 30 213 2.8E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_04518 a46b47102e1e8e4a13d96b784e79ce85 358 Gene3D G3DSA:2.40.50.140 288 347 1.8E-11 T 11-10-2018 VSVS12_02862 11036710cc5196ab0769d29bdaaae4cf 336 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 5 333 42.785 T 11-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VSVS12_02862 11036710cc5196ab0769d29bdaaae4cf 336 Gene3D G3DSA:3.40.190.80 200 335 6.4E-60 T 11-10-2018 VSVS12_02862 11036710cc5196ab0769d29bdaaae4cf 336 Gene3D G3DSA:3.30.540.10 4 198 1.6E-76 T 11-10-2018 VSVS12_02862 11036710cc5196ab0769d29bdaaae4cf 336 PIRSF PIRSF000904 1 335 4.9E-126 T 11-10-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VSVS12_02862 11036710cc5196ab0769d29bdaaae4cf 336 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 6 197 8.1E-77 T 11-10-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VSVS12_02862 11036710cc5196ab0769d29bdaaae4cf 336 SUPERFAMILY SSF56655 3 328 5.07E-114 T 11-10-2018 VSVS12_02862 11036710cc5196ab0769d29bdaaae4cf 336 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 273 285 - T 11-10-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VSVS12_02862 11036710cc5196ab0769d29bdaaae4cf 336 PIRSF PIRSF500210 1 335 2.2E-129 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VSVS12_02862 11036710cc5196ab0769d29bdaaae4cf 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 307 332 2.1E-75 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VSVS12_02862 11036710cc5196ab0769d29bdaaae4cf 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 30 57 2.1E-75 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VSVS12_02862 11036710cc5196ab0769d29bdaaae4cf 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 182 205 2.1E-75 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VSVS12_02862 11036710cc5196ab0769d29bdaaae4cf 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 208 235 2.1E-75 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VSVS12_02862 11036710cc5196ab0769d29bdaaae4cf 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 151 174 2.1E-75 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VSVS12_02862 11036710cc5196ab0769d29bdaaae4cf 336 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 67 93 2.1E-75 T 11-10-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 VSVS12_03859 e1491629b6830149ddd0adcc82831fdb 380 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 11-10-2018 IPR002178 PTS EIIA type-2 domain VSVS12_03859 e1491629b6830149ddd0adcc82831fdb 380 SUPERFAMILY SSF55804 4 141 7.46E-40 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VSVS12_03859 e1491629b6830149ddd0adcc82831fdb 380 Gene3D G3DSA:3.40.930.10 1 142 2.7E-41 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VSVS12_03859 e1491629b6830149ddd0adcc82831fdb 380 Gene3D G3DSA:3.30.1340.10 291 380 1.3E-25 T 11-10-2018 IPR035895 HPr-like superfamily VSVS12_03859 e1491629b6830149ddd0adcc82831fdb 380 Pfam PF00381 PTS HPr component phosphorylation site 294 374 5.5E-24 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like VSVS12_03859 e1491629b6830149ddd0adcc82831fdb 380 SUPERFAMILY SSF55804 149 274 5.76E-13 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VSVS12_03859 e1491629b6830149ddd0adcc82831fdb 380 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 293 373 4.9E-21 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like VSVS12_03859 e1491629b6830149ddd0adcc82831fdb 380 SUPERFAMILY SSF55594 294 379 1.31E-23 T 11-10-2018 IPR035895 HPr-like superfamily VSVS12_03859 e1491629b6830149ddd0adcc82831fdb 380 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 302 309 - T 11-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VSVS12_03859 e1491629b6830149ddd0adcc82831fdb 380 PRINTS PR00107 Phosphocarrier protein signature 345 362 3.5E-15 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like VSVS12_03859 e1491629b6830149ddd0adcc82831fdb 380 PRINTS PR00107 Phosphocarrier protein signature 302 318 3.5E-15 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like VSVS12_03859 e1491629b6830149ddd0adcc82831fdb 380 PRINTS PR00107 Phosphocarrier protein signature 330 345 3.5E-15 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like VSVS12_03859 e1491629b6830149ddd0adcc82831fdb 380 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 140 1.6E-32 T 11-10-2018 IPR002178 PTS EIIA type-2 domain VSVS12_04503 f646ae64ee0a4e6e908e87bada7dc31f 373 Pfam PF01609 Transposase DDE domain 103 335 2.6E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_04503 f646ae64ee0a4e6e908e87bada7dc31f 373 Pfam PF13808 DDE_Tnp_1-associated 8 94 8.0E-26 T 11-10-2018 IPR032806 H repeat-associated protein, N-terminal VSVS12_03734 f646ae64ee0a4e6e908e87bada7dc31f 373 Pfam PF01609 Transposase DDE domain 103 335 2.6E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_03734 f646ae64ee0a4e6e908e87bada7dc31f 373 Pfam PF13808 DDE_Tnp_1-associated 8 94 8.0E-26 T 11-10-2018 IPR032806 H repeat-associated protein, N-terminal VSVS12_00552 bf0ec89a2da1a58fee779562963142f7 421 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 416 2.8E-183 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VSVS12_00552 bf0ec89a2da1a58fee779562963142f7 421 SUPERFAMILY SSF55205 4 418 3.43E-143 T 11-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 VSVS12_00552 bf0ec89a2da1a58fee779562963142f7 421 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 10 407 1.2E-122 T 11-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 VSVS12_00552 bf0ec89a2da1a58fee779562963142f7 421 Gene3D G3DSA:3.65.10.10 12 414 3.8E-171 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 VSVS12_00552 bf0ec89a2da1a58fee779562963142f7 421 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 43.896 T 11-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VSVS12_00552 bf0ec89a2da1a58fee779562963142f7 421 Gene3D G3DSA:3.65.10.10 22 229 3.8E-171 T 11-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 VSVS12_03501 ba5a0b58c153a4d72cce2486d574de8e 198 Pfam PF01810 LysE type translocator 12 197 2.0E-41 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VSVS12_04393 7c1078f3b381b6c61f319be9e46ca8a6 276 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 18 136 8.2E-23 T 11-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 VSVS12_04393 7c1078f3b381b6c61f319be9e46ca8a6 276 SUPERFAMILY SSF51695 18 264 4.71E-46 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VSVS12_04393 7c1078f3b381b6c61f319be9e46ca8a6 276 Gene3D G3DSA:3.20.20.190 4 261 6.4E-44 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VSVS12_04519 7c1078f3b381b6c61f319be9e46ca8a6 276 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 18 136 8.2E-23 T 11-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 VSVS12_04519 7c1078f3b381b6c61f319be9e46ca8a6 276 SUPERFAMILY SSF51695 18 264 4.71E-46 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VSVS12_04519 7c1078f3b381b6c61f319be9e46ca8a6 276 Gene3D G3DSA:3.20.20.190 4 261 6.4E-44 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VSVS12_04126 f5cffb0f98cd9ef7d4960b590eef0249 466 SUPERFAMILY SSF51735 145 272 1.77E-8 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_04126 f5cffb0f98cd9ef7d4960b590eef0249 466 Pfam PF02397 Bacterial sugar transferase 276 458 7.4E-66 T 11-10-2018 IPR003362 Bacterial sugar transferase VSVS12_04126 f5cffb0f98cd9ef7d4960b590eef0249 466 Gene3D G3DSA:3.40.50.720 140 265 1.1E-16 T 11-10-2018 VSVS12_04126 f5cffb0f98cd9ef7d4960b590eef0249 466 Pfam PF13727 CoA-binding domain 62 240 1.4E-33 T 11-10-2018 VSVS12_04126 f5cffb0f98cd9ef7d4960b590eef0249 466 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 22 466 1.1E-166 T 11-10-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 VSVS12_04126 f5cffb0f98cd9ef7d4960b590eef0249 466 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 21 466 6.1E-148 T 11-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase VSVS12_03087 1caccec47c5eff02c69a7403bb3b42ba 740 Gene3D G3DSA:3.20.20.80 184 729 5.2E-119 T 11-10-2018 VSVS12_03087 1caccec47c5eff02c69a7403bb3b42ba 740 Pfam PF02446 4-alpha-glucanotransferase 190 712 7.3E-125 T 11-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 VSVS12_03087 1caccec47c5eff02c69a7403bb3b42ba 740 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 140 731 2.6E-186 T 11-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 VSVS12_03087 1caccec47c5eff02c69a7403bb3b42ba 740 SUPERFAMILY SSF51445 174 732 1.17E-147 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily VSVS12_02261 1edcfeea28c4c14dcf495a2c9f883e69 577 SUPERFAMILY SSF47323 455 577 1.83E-35 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VSVS12_02261 1edcfeea28c4c14dcf495a2c9f883e69 577 Gene3D G3DSA:1.10.730.10 455 577 7.9E-35 T 11-10-2018 VSVS12_02261 1edcfeea28c4c14dcf495a2c9f883e69 577 SUPERFAMILY SSF52374 109 454 5.63E-95 T 11-10-2018 VSVS12_02261 1edcfeea28c4c14dcf495a2c9f883e69 577 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 1.2E-19 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VSVS12_02261 1edcfeea28c4c14dcf495a2c9f883e69 577 Gene3D G3DSA:3.40.50.620 107 454 3.4E-109 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VSVS12_02261 1edcfeea28c4c14dcf495a2c9f883e69 577 SMART SM01016 5 87 5.0E-28 T 11-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VSVS12_02261 1edcfeea28c4c14dcf495a2c9f883e69 577 Pfam PF05746 DALR anticodon binding domain 461 577 1.3E-35 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 VSVS12_02261 1edcfeea28c4c14dcf495a2c9f883e69 577 SUPERFAMILY SSF55190 2 97 1.1E-21 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 VSVS12_02261 1edcfeea28c4c14dcf495a2c9f883e69 577 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VSVS12_02261 1edcfeea28c4c14dcf495a2c9f883e69 577 Gene3D G3DSA:3.30.1360.70 1 106 4.3E-33 T 11-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 VSVS12_02261 1edcfeea28c4c14dcf495a2c9f883e69 577 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 577 8.7E-198 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VSVS12_02261 1edcfeea28c4c14dcf495a2c9f883e69 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 3.6E-25 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VSVS12_02261 1edcfeea28c4c14dcf495a2c9f883e69 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 3.6E-25 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VSVS12_02261 1edcfeea28c4c14dcf495a2c9f883e69 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 3.6E-25 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VSVS12_02261 1edcfeea28c4c14dcf495a2c9f883e69 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 304 325 3.6E-25 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VSVS12_02261 1edcfeea28c4c14dcf495a2c9f883e69 577 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 577 27.782 T 11-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 VSVS12_02261 1edcfeea28c4c14dcf495a2c9f883e69 577 SMART SM00836 461 577 1.1E-40 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 VSVS12_02261 1edcfeea28c4c14dcf495a2c9f883e69 577 Pfam PF00750 tRNA synthetases class I (R) 100 447 9.4E-161 T 11-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 VSVS12_02827 abb48bae4387e75d2961ae103076c96b 110 Pfam PF00893 Small Multidrug Resistance protein 1 95 2.0E-17 T 11-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 VSVS12_02827 abb48bae4387e75d2961ae103076c96b 110 SUPERFAMILY SSF103481 5 107 1.2E-15 T 11-10-2018 VSVS12_02827 abb48bae4387e75d2961ae103076c96b 110 Gene3D G3DSA:1.10.3730.20 1 110 1.9E-25 T 11-10-2018 VSVS12_00984 68454421e150f8715e94f51c9ddea587 379 Pfam PF07196 Flagellin hook IN motif 194 246 1.0E-7 T 11-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VSVS12_00984 68454421e150f8715e94f51c9ddea587 379 SUPERFAMILY SSF64518 1 379 3.92E-97 T 11-10-2018 VSVS12_00984 68454421e150f8715e94f51c9ddea587 379 PRINTS PR00207 Flagellin signature 111 134 5.9E-25 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VSVS12_00984 68454421e150f8715e94f51c9ddea587 379 PRINTS PR00207 Flagellin signature 76 95 5.9E-25 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VSVS12_00984 68454421e150f8715e94f51c9ddea587 379 PRINTS PR00207 Flagellin signature 37 54 5.9E-25 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VSVS12_00984 68454421e150f8715e94f51c9ddea587 379 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 8.8E-43 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VSVS12_00984 68454421e150f8715e94f51c9ddea587 379 Pfam PF00700 Bacterial flagellin C-terminal helical region 294 378 3.6E-26 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VSVS12_00984 68454421e150f8715e94f51c9ddea587 379 Gene3D G3DSA:1.20.1330.10 44 328 1.1E-76 T 11-10-2018 VSVS12_00984 68454421e150f8715e94f51c9ddea587 379 Gene3D G3DSA:3.30.70.2120 174 277 1.1E-76 T 11-10-2018 VSVS12_00984 68454421e150f8715e94f51c9ddea587 379 Gene3D G3DSA:1.10.8.410 329 379 2.2E-21 T 11-10-2018 VSVS12_00087 70db87588d9c83976de6004a163b165d 648 SUPERFAMILY SSF58104 337 645 6.41E-63 T 11-10-2018 VSVS12_00087 70db87588d9c83976de6004a163b165d 648 SMART SM00304 316 369 1.5E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_00087 70db87588d9c83976de6004a163b165d 648 Gene3D G3DSA:1.10.287.950 316 646 6.0E-62 T 11-10-2018 VSVS12_00087 70db87588d9c83976de6004a163b165d 648 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 446 609 6.8E-38 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_00087 70db87588d9c83976de6004a163b165d 648 SMART SM00283 384 645 1.8E-54 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_00087 70db87588d9c83976de6004a163b165d 648 Gene3D G3DSA:3.30.450.20 174 293 1.6E-9 T 11-10-2018 VSVS12_00087 70db87588d9c83976de6004a163b165d 648 Pfam PF00672 HAMP domain 316 365 1.6E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_02015 0f5f17aa0eeaae125326f5d26f3c899f 682 SMART SM00052 424 664 8.6E-47 T 11-10-2018 IPR001633 EAL domain VSVS12_02015 0f5f17aa0eeaae125326f5d26f3c899f 682 Pfam PF02378 Phosphotransferase system, EIIC 16 317 2.7E-21 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VSVS12_02015 0f5f17aa0eeaae125326f5d26f3c899f 682 SUPERFAMILY SSF141868 435 672 4.58E-59 T 11-10-2018 IPR035919 EAL domain superfamily VSVS12_02015 0f5f17aa0eeaae125326f5d26f3c899f 682 Pfam PF00563 EAL domain 434 658 4.6E-50 T 11-10-2018 IPR001633 EAL domain VSVS12_02015 0f5f17aa0eeaae125326f5d26f3c899f 682 Gene3D G3DSA:3.20.20.450 411 666 2.3E-60 T 11-10-2018 IPR035919 EAL domain superfamily VSVS12_02071 0d7433baeae2365a1c656240ec1629fc 456 SUPERFAMILY SSF48557 4 448 4.87E-109 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 VSVS12_02071 0d7433baeae2365a1c656240ec1629fc 456 Gene3D G3DSA:1.20.200.10 118 447 4.2E-158 T 11-10-2018 VSVS12_02071 0d7433baeae2365a1c656240ec1629fc 456 ProSitePatterns PS00163 Fumarate lyases signature. 295 304 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 VSVS12_02071 0d7433baeae2365a1c656240ec1629fc 456 PRINTS PR00149 Fumarate lyase superfamily signature 252 279 2.1E-18 T 11-10-2018 IPR000362 Fumarate lyase family VSVS12_02071 0d7433baeae2365a1c656240ec1629fc 456 PRINTS PR00149 Fumarate lyase superfamily signature 295 311 2.1E-18 T 11-10-2018 IPR000362 Fumarate lyase family VSVS12_02071 0d7433baeae2365a1c656240ec1629fc 456 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 2.1E-18 T 11-10-2018 IPR000362 Fumarate lyase family VSVS12_02071 0d7433baeae2365a1c656240ec1629fc 456 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 2.1E-18 T 11-10-2018 IPR000362 Fumarate lyase family VSVS12_02071 0d7433baeae2365a1c656240ec1629fc 456 Pfam PF00206 Lyase 14 313 3.8E-75 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal VSVS12_02071 0d7433baeae2365a1c656240ec1629fc 456 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 456 3.9E-150 T 11-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VSVS12_02071 0d7433baeae2365a1c656240ec1629fc 456 Gene3D G3DSA:1.10.40.30 383 446 4.2E-158 T 11-10-2018 VSVS12_02071 0d7433baeae2365a1c656240ec1629fc 456 Pfam PF08328 Adenylosuccinate lyase C-terminal 332 446 4.0E-52 T 11-10-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 VSVS12_02071 0d7433baeae2365a1c656240ec1629fc 456 Gene3D G3DSA:1.10.275.10 1 117 8.6E-51 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal VSVS12_03510 b41f49e6680861fde7c0d5d9d737a85d 305 Hamap MF_01987 Ribokinase [rbsK]. 2 301 26.154 T 11-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 VSVS12_03510 b41f49e6680861fde7c0d5d9d737a85d 305 Gene3D G3DSA:3.40.1190.20 1 300 5.2E-103 T 11-10-2018 IPR029056 Ribokinase-like VSVS12_03510 b41f49e6680861fde7c0d5d9d737a85d 305 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 5 299 2.5E-110 T 11-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 VSVS12_03510 b41f49e6680861fde7c0d5d9d737a85d 305 PRINTS PR00990 Ribokinase signature 33 52 1.2E-33 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VSVS12_03510 b41f49e6680861fde7c0d5d9d737a85d 305 PRINTS PR00990 Ribokinase signature 173 188 1.2E-33 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VSVS12_03510 b41f49e6680861fde7c0d5d9d737a85d 305 PRINTS PR00990 Ribokinase signature 217 228 1.2E-33 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VSVS12_03510 b41f49e6680861fde7c0d5d9d737a85d 305 PRINTS PR00990 Ribokinase signature 105 118 1.2E-33 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VSVS12_03510 b41f49e6680861fde7c0d5d9d737a85d 305 PRINTS PR00990 Ribokinase signature 6 27 1.2E-33 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VSVS12_03510 b41f49e6680861fde7c0d5d9d737a85d 305 SUPERFAMILY SSF53613 1 301 6.08E-83 T 11-10-2018 IPR029056 Ribokinase-like VSVS12_03510 b41f49e6680861fde7c0d5d9d737a85d 305 Pfam PF00294 pfkB family carbohydrate kinase 1 294 5.4E-73 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB VSVS12_03510 b41f49e6680861fde7c0d5d9d737a85d 305 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 246 259 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VSVS12_04318 889b6d11a65fb5dbfe7b9f7185a06546 406 Gene3D G3DSA:1.10.287.70 134 228 1.1E-16 T 11-10-2018 VSVS12_04318 889b6d11a65fb5dbfe7b9f7185a06546 406 Pfam PF02254 TrkA-N domain 250 369 1.1E-21 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VSVS12_04318 889b6d11a65fb5dbfe7b9f7185a06546 406 Pfam PF07885 Ion channel 153 225 1.4E-14 T 11-10-2018 IPR013099 Potassium channel domain VSVS12_04318 889b6d11a65fb5dbfe7b9f7185a06546 406 SUPERFAMILY SSF51735 246 382 1.38E-26 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_04318 889b6d11a65fb5dbfe7b9f7185a06546 406 Gene3D G3DSA:3.40.50.720 245 397 7.9E-35 T 11-10-2018 VSVS12_04318 889b6d11a65fb5dbfe7b9f7185a06546 406 SUPERFAMILY SSF81324 35 225 1.44E-18 T 11-10-2018 VSVS12_01465 7f761fc5405da15192d62fbcc2b2e42c 651 SMART SM00849 123 345 9.0E-22 T 11-10-2018 IPR001279 Metallo-beta-lactamase VSVS12_01465 7f761fc5405da15192d62fbcc2b2e42c 651 Pfam PF14864 Alkyl sulfatase C-terminal 528 651 4.3E-41 T 11-10-2018 IPR029229 Alkyl sulfatase, C-terminal VSVS12_01465 7f761fc5405da15192d62fbcc2b2e42c 651 Pfam PF14863 Alkyl sulfatase dimerisation 384 520 6.1E-59 T 11-10-2018 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 VSVS12_01465 7f761fc5405da15192d62fbcc2b2e42c 651 SUPERFAMILY SSF55718 530 651 5.42E-38 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily VSVS12_01465 7f761fc5405da15192d62fbcc2b2e42c 651 Pfam PF00753 Metallo-beta-lactamase superfamily 120 345 1.0E-37 T 11-10-2018 IPR001279 Metallo-beta-lactamase VSVS12_01465 7f761fc5405da15192d62fbcc2b2e42c 651 Gene3D G3DSA:1.25.40.880 381 521 5.8E-60 T 11-10-2018 IPR038536 Alkyl/aryl-sulfatase, dimerisation domain superfamily VSVS12_01465 7f761fc5405da15192d62fbcc2b2e42c 651 SUPERFAMILY SSF56281 21 522 1.54E-157 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VSVS12_01465 7f761fc5405da15192d62fbcc2b2e42c 651 Gene3D G3DSA:3.30.1050.10 524 651 4.3E-46 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily VSVS12_01465 7f761fc5405da15192d62fbcc2b2e42c 651 Gene3D G3DSA:3.60.15.30 19 380 3.7E-168 T 11-10-2018 VSVS12_04322 fed7228e910cc5d899f56e8ab348c17e 188 Pfam PF02525 Flavodoxin-like fold 1 164 6.0E-33 T 11-10-2018 IPR003680 Flavodoxin-like fold VSVS12_04322 fed7228e910cc5d899f56e8ab348c17e 188 Gene3D G3DSA:3.40.50.360 2 180 5.3E-43 T 11-10-2018 IPR029039 Flavoprotein-like superfamily VSVS12_04322 fed7228e910cc5d899f56e8ab348c17e 188 SUPERFAMILY SSF52218 1 172 9.85E-40 T 11-10-2018 IPR029039 Flavoprotein-like superfamily VSVS12_03832 c67ef61ff28c37f073d08f8e8385b379 393 PRINTS PR00799 Aspartate aminotransferase signature 270 295 3.0E-28 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VSVS12_03832 c67ef61ff28c37f073d08f8e8385b379 393 PRINTS PR00799 Aspartate aminotransferase signature 203 215 3.0E-28 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VSVS12_03832 c67ef61ff28c37f073d08f8e8385b379 393 PRINTS PR00799 Aspartate aminotransferase signature 172 191 3.0E-28 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VSVS12_03832 c67ef61ff28c37f073d08f8e8385b379 393 PRINTS PR00799 Aspartate aminotransferase signature 338 356 3.0E-28 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VSVS12_03832 c67ef61ff28c37f073d08f8e8385b379 393 Gene3D G3DSA:3.90.1150.10 11 389 2.9E-136 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VSVS12_03832 c67ef61ff28c37f073d08f8e8385b379 393 Gene3D G3DSA:3.40.640.10 45 312 2.9E-136 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VSVS12_03832 c67ef61ff28c37f073d08f8e8385b379 393 Pfam PF00155 Aminotransferase class I and II 27 389 1.6E-67 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VSVS12_03832 c67ef61ff28c37f073d08f8e8385b379 393 SUPERFAMILY SSF53383 1 392 9.65E-98 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VSVS12_03395 e6f45ec60ea35655accf593fee53fac8 263 SUPERFAMILY SSF56931 30 262 6.28E-62 T 11-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 VSVS12_03395 e6f45ec60ea35655accf593fee53fac8 263 PRINTS PR01486 Bacterial phospholipase A1 protein signature 176 194 6.0E-8 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 VSVS12_03395 e6f45ec60ea35655accf593fee53fac8 263 PRINTS PR01486 Bacterial phospholipase A1 protein signature 66 83 6.0E-8 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 VSVS12_03395 e6f45ec60ea35655accf593fee53fac8 263 PRINTS PR01486 Bacterial phospholipase A1 protein signature 234 254 6.0E-8 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 VSVS12_03395 e6f45ec60ea35655accf593fee53fac8 263 Gene3D G3DSA:2.40.230.10 23 263 5.2E-59 T 11-10-2018 IPR036541 Phospholipase A1 superfamily GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 VSVS12_03395 e6f45ec60ea35655accf593fee53fac8 263 Pfam PF02253 Phospholipase A1 29 260 2.7E-55 T 11-10-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 VSVS12_02631 feffdd3207f0043c536394e3bd84f5a3 266 PRINTS PR00169 Potassium channel signature 183 209 1.6E-8 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VSVS12_02631 feffdd3207f0043c536394e3bd84f5a3 266 PRINTS PR00169 Potassium channel signature 154 176 1.6E-8 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VSVS12_02631 feffdd3207f0043c536394e3bd84f5a3 266 PRINTS PR00169 Potassium channel signature 123 146 1.6E-8 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VSVS12_02631 feffdd3207f0043c536394e3bd84f5a3 266 Pfam PF07885 Ion channel 131 210 7.1E-15 T 11-10-2018 IPR013099 Potassium channel domain VSVS12_02631 feffdd3207f0043c536394e3bd84f5a3 266 Gene3D G3DSA:1.10.287.70 11 211 1.8E-42 T 11-10-2018 VSVS12_02631 feffdd3207f0043c536394e3bd84f5a3 266 SUPERFAMILY SSF81324 13 210 3.53E-46 T 11-10-2018 VSVS12_00250 69d42be69be126b4c73cb8d36a28760c 458 SUPERFAMILY SSF116726 148 226 2.62E-9 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VSVS12_00250 69d42be69be126b4c73cb8d36a28760c 458 SUPERFAMILY SSF51735 1 151 2.06E-36 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_00250 69d42be69be126b4c73cb8d36a28760c 458 Gene3D G3DSA:3.30.70.1450 367 458 4.7E-28 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VSVS12_00250 69d42be69be126b4c73cb8d36a28760c 458 Gene3D G3DSA:3.30.70.1450 140 232 1.5E-21 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VSVS12_00250 69d42be69be126b4c73cb8d36a28760c 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 4.7E-34 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VSVS12_00250 69d42be69be126b4c73cb8d36a28760c 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 4.7E-34 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VSVS12_00250 69d42be69be126b4c73cb8d36a28760c 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 4.7E-34 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VSVS12_00250 69d42be69be126b4c73cb8d36a28760c 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 4.7E-34 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VSVS12_00250 69d42be69be126b4c73cb8d36a28760c 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 4.7E-34 T 11-10-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 VSVS12_00250 69d42be69be126b4c73cb8d36a28760c 458 SUPERFAMILY SSF51735 232 376 4.43E-34 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_00250 69d42be69be126b4c73cb8d36a28760c 458 Gene3D G3DSA:3.40.50.720 233 366 1.4E-38 T 11-10-2018 VSVS12_00250 69d42be69be126b4c73cb8d36a28760c 458 SUPERFAMILY SSF116726 375 437 1.26E-7 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VSVS12_00250 69d42be69be126b4c73cb8d36a28760c 458 Pfam PF02080 TrkA-C domain 391 449 2.1E-9 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VSVS12_00250 69d42be69be126b4c73cb8d36a28760c 458 Pfam PF02080 TrkA-C domain 156 225 4.2E-11 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VSVS12_00250 69d42be69be126b4c73cb8d36a28760c 458 Pfam PF02254 TrkA-N domain 235 350 1.4E-25 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VSVS12_00250 69d42be69be126b4c73cb8d36a28760c 458 Pfam PF02254 TrkA-N domain 3 115 1.9E-29 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VSVS12_00250 69d42be69be126b4c73cb8d36a28760c 458 Gene3D G3DSA:3.40.50.720 2 139 2.9E-52 T 11-10-2018 VSVS12_00447 560b4a8a6093ecd2d9f88f408e48b823 338 Gene3D G3DSA:3.40.50.620 5 333 8.2E-140 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VSVS12_00447 560b4a8a6093ecd2d9f88f408e48b823 338 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 335 40.615 T 11-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 VSVS12_00447 560b4a8a6093ecd2d9f88f408e48b823 338 Pfam PF00579 tRNA synthetases class I (W and Y) 3 289 9.7E-77 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 VSVS12_00447 560b4a8a6093ecd2d9f88f408e48b823 338 Gene3D G3DSA:1.10.240.10 191 304 8.2E-140 T 11-10-2018 VSVS12_00447 560b4a8a6093ecd2d9f88f408e48b823 338 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 334 3.5E-108 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VSVS12_00447 560b4a8a6093ecd2d9f88f408e48b823 338 SUPERFAMILY SSF52374 5 334 2.81E-90 T 11-10-2018 VSVS12_00447 560b4a8a6093ecd2d9f88f408e48b823 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 198 208 3.4E-26 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VSVS12_00447 560b4a8a6093ecd2d9f88f408e48b823 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 3.4E-26 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VSVS12_00447 560b4a8a6093ecd2d9f88f408e48b823 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 3.4E-26 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VSVS12_00447 560b4a8a6093ecd2d9f88f408e48b823 338 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 3.4E-26 T 11-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 VSVS12_01192 3c3b3caca358d5de4842608b99115a07 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VSVS12_01192 3c3b3caca358d5de4842608b99115a07 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 8.1E-20 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VSVS12_01192 3c3b3caca358d5de4842608b99115a07 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 8.1E-20 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VSVS12_01192 3c3b3caca358d5de4842608b99115a07 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 8.1E-20 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VSVS12_01192 3c3b3caca358d5de4842608b99115a07 90 SMART SM00411 1 90 2.1E-41 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VSVS12_01192 3c3b3caca358d5de4842608b99115a07 90 SUPERFAMILY SSF47729 1 90 2.65E-31 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VSVS12_01192 3c3b3caca358d5de4842608b99115a07 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 9.1E-33 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VSVS12_01192 3c3b3caca358d5de4842608b99115a07 90 Gene3D G3DSA:4.10.520.10 1 90 2.0E-35 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VSVS12_03844 b7da22434a10cef8233303aa36e2c6bf 855 SUPERFAMILY SSF103190 53 267 2.12E-56 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VSVS12_03844 b7da22434a10cef8233303aa36e2c6bf 855 Gene3D G3DSA:1.10.287.130 464 538 6.2E-21 T 11-10-2018 VSVS12_03844 b7da22434a10cef8233303aa36e2c6bf 855 Gene3D G3DSA:3.40.50.2300 714 853 7.0E-29 T 11-10-2018 VSVS12_03844 b7da22434a10cef8233303aa36e2c6bf 855 Gene3D G3DSA:3.30.565.10 539 704 3.2E-47 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_03844 b7da22434a10cef8233303aa36e2c6bf 855 Gene3D G3DSA:3.30.450.220 50 206 6.9E-59 T 11-10-2018 VSVS12_03844 b7da22434a10cef8233303aa36e2c6bf 855 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 586 698 1.0E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_03844 b7da22434a10cef8233303aa36e2c6bf 855 SUPERFAMILY SSF55874 527 702 3.01E-44 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_03844 b7da22434a10cef8233303aa36e2c6bf 855 Pfam PF00512 His Kinase A (phospho-acceptor) domain 474 538 6.4E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_03844 b7da22434a10cef8233303aa36e2c6bf 855 SUPERFAMILY SSF52172 723 844 2.13E-28 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_03844 b7da22434a10cef8233303aa36e2c6bf 855 Pfam PF00072 Response regulator receiver domain 726 837 1.6E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_03844 b7da22434a10cef8233303aa36e2c6bf 855 SMART SM00387 585 700 4.0E-34 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_03844 b7da22434a10cef8233303aa36e2c6bf 855 PRINTS PR00344 Bacterial sensor protein C-terminal signature 643 653 1.7E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_03844 b7da22434a10cef8233303aa36e2c6bf 855 PRINTS PR00344 Bacterial sensor protein C-terminal signature 660 678 1.7E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_03844 b7da22434a10cef8233303aa36e2c6bf 855 PRINTS PR00344 Bacterial sensor protein C-terminal signature 684 697 1.7E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_03844 b7da22434a10cef8233303aa36e2c6bf 855 PRINTS PR00344 Bacterial sensor protein C-terminal signature 625 639 1.7E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_03844 b7da22434a10cef8233303aa36e2c6bf 855 SMART SM00448 724 837 6.1E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_03844 b7da22434a10cef8233303aa36e2c6bf 855 SMART SM00388 473 538 6.7E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_03844 b7da22434a10cef8233303aa36e2c6bf 855 ProDom PD142495 MEMBRANE SENSOR TRANSFERASE LUXQ 2.7.3.- TRANSMEMBRANE INNER PHOSPHORYLATION SENSORY AUTOINDUCER 10 355 1.0E-66 T 11-10-2018 IPR015387 LuxQ, periplasmic GO:0004673|GO:0016791 VSVS12_03844 b7da22434a10cef8233303aa36e2c6bf 855 SUPERFAMILY SSF55785 344 451 7.96E-7 T 11-10-2018 IPR035965 PAS domain superfamily VSVS12_03844 b7da22434a10cef8233303aa36e2c6bf 855 Gene3D G3DSA:3.30.450.20 341 463 6.0E-8 T 11-10-2018 VSVS12_03844 b7da22434a10cef8233303aa36e2c6bf 855 Pfam PF09308 LuxQ, periplasmic 42 275 5.7E-69 T 11-10-2018 IPR015387 LuxQ, periplasmic GO:0004673|GO:0016791 VSVS12_03844 b7da22434a10cef8233303aa36e2c6bf 855 SUPERFAMILY SSF47384 462 539 1.02E-18 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VSVS12_01663 28556b038f349e0b5f59fdb598743c81 122 SUPERFAMILY SSF55781 2 109 1.37E-35 T 11-10-2018 VSVS12_01663 28556b038f349e0b5f59fdb598743c81 122 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 54 71 - T 11-10-2018 IPR000614 Free Met sulfoxide reductase conserved site VSVS12_01663 28556b038f349e0b5f59fdb598743c81 122 Pfam PF13185 GAF domain 9 112 2.7E-10 T 11-10-2018 IPR003018 GAF domain GO:0005515 VSVS12_01663 28556b038f349e0b5f59fdb598743c81 122 Gene3D G3DSA:3.30.450.40 1 122 2.8E-53 T 11-10-2018 IPR029016 GAF-like domain superfamily VSVS12_03951 40ad1145982201dfb64d3a79bfac11bd 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 3.6E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_03951 40ad1145982201dfb64d3a79bfac11bd 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 3.6E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_03951 40ad1145982201dfb64d3a79bfac11bd 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 3.6E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_03951 40ad1145982201dfb64d3a79bfac11bd 311 Gene3D G3DSA:3.40.190.10 105 299 3.0E-19 T 11-10-2018 VSVS12_03951 40ad1145982201dfb64d3a79bfac11bd 311 SUPERFAMILY SSF53850 99 301 4.34E-21 T 11-10-2018 VSVS12_03951 40ad1145982201dfb64d3a79bfac11bd 311 Pfam PF03466 LysR substrate binding domain 99 299 6.7E-15 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_03951 40ad1145982201dfb64d3a79bfac11bd 311 Gene3D G3DSA:1.10.10.10 4 90 1.5E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_03951 40ad1145982201dfb64d3a79bfac11bd 311 Gene3D G3DSA:3.40.190.10 176 273 3.0E-19 T 11-10-2018 VSVS12_03951 40ad1145982201dfb64d3a79bfac11bd 311 SUPERFAMILY SSF46785 9 89 1.05E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_03951 40ad1145982201dfb64d3a79bfac11bd 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 70 2.6E-12 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_02194 aea86143fde81ba01d476e547bd825f7 873 SUPERFAMILY SSF57783 589 627 1.67E-7 T 11-10-2018 VSVS12_02194 aea86143fde81ba01d476e547bd825f7 873 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 736 53.861 T 11-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 VSVS12_02194 aea86143fde81ba01d476e547bd825f7 873 Gene3D G3DSA:2.70.20.10 219 478 2.8E-160 T 11-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 VSVS12_02194 aea86143fde81ba01d476e547bd825f7 873 Gene3D G3DSA:3.40.50.140 1 169 1.8E-65 T 11-10-2018 VSVS12_02194 aea86143fde81ba01d476e547bd825f7 873 SUPERFAMILY SSF57783 703 746 2.04E-5 T 11-10-2018 VSVS12_02194 aea86143fde81ba01d476e547bd825f7 873 Pfam PF08272 Topoisomerase I zinc-ribbon-like 828 868 9.0E-16 T 11-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 VSVS12_02194 aea86143fde81ba01d476e547bd825f7 873 Pfam PF08272 Topoisomerase I zinc-ribbon-like 761 797 1.4E-10 T 11-10-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 VSVS12_02194 aea86143fde81ba01d476e547bd825f7 873 SUPERFAMILY SSF56712 3 614 7.72E-196 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain VSVS12_02194 aea86143fde81ba01d476e547bd825f7 873 SMART SM00437 278 532 3.2E-119 T 11-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 VSVS12_02194 aea86143fde81ba01d476e547bd825f7 873 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 639 1.5E-243 T 11-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 VSVS12_02194 aea86143fde81ba01d476e547bd825f7 873 Gene3D G3DSA:1.10.290.10 286 410 2.8E-160 T 11-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 VSVS12_02194 aea86143fde81ba01d476e547bd825f7 873 Gene3D G3DSA:3.30.65.10 749 811 6.4E-32 T 11-10-2018 VSVS12_02194 aea86143fde81ba01d476e547bd825f7 873 Gene3D G3DSA:3.30.65.10 699 748 2.2E-6 T 11-10-2018 VSVS12_02194 aea86143fde81ba01d476e547bd825f7 873 Gene3D G3DSA:2.20.25.10 812 869 1.3E-25 T 11-10-2018 VSVS12_02194 aea86143fde81ba01d476e547bd825f7 873 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 315 329 - T 11-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 VSVS12_02194 aea86143fde81ba01d476e547bd825f7 873 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 602 627 4.0E-5 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VSVS12_02194 aea86143fde81ba01d476e547bd825f7 873 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 713 749 7.1E-9 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VSVS12_02194 aea86143fde81ba01d476e547bd825f7 873 SUPERFAMILY SSF57783 814 869 2.38E-19 T 11-10-2018 VSVS12_02194 aea86143fde81ba01d476e547bd825f7 873 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 112 125 3.0E-36 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VSVS12_02194 aea86143fde81ba01d476e547bd825f7 873 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 197 215 3.0E-36 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VSVS12_02194 aea86143fde81ba01d476e547bd825f7 873 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 495 509 3.0E-36 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VSVS12_02194 aea86143fde81ba01d476e547bd825f7 873 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 320 329 3.0E-36 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VSVS12_02194 aea86143fde81ba01d476e547bd825f7 873 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 396 412 3.0E-36 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VSVS12_02194 aea86143fde81ba01d476e547bd825f7 873 Pfam PF01131 DNA topoisomerase 164 570 8.4E-126 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VSVS12_02194 aea86143fde81ba01d476e547bd825f7 873 SMART SM00493 3 138 1.3E-27 T 11-10-2018 IPR006171 TOPRIM domain VSVS12_02194 aea86143fde81ba01d476e547bd825f7 873 Pfam PF01751 Toprim domain 5 148 6.2E-31 T 11-10-2018 IPR006171 TOPRIM domain VSVS12_02194 aea86143fde81ba01d476e547bd825f7 873 Gene3D G3DSA:1.10.460.10 171 576 2.8E-160 T 11-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VSVS12_02194 aea86143fde81ba01d476e547bd825f7 873 SUPERFAMILY SSF57783 748 811 3.4E-19 T 11-10-2018 VSVS12_02194 aea86143fde81ba01d476e547bd825f7 873 SMART SM00436 139 227 3.4E-47 T 11-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 VSVS12_01134 b3943eb2e671a4fd2cca678a0780857b 422 Pfam PF11871 Domain of unknown function (DUF3391) 6 130 1.4E-17 T 11-10-2018 IPR021812 Protein of unknown function DUF3391 VSVS12_01134 b3943eb2e671a4fd2cca678a0780857b 422 TIGRFAM TIGR00277 HDIG: HDIG domain 177 267 2.1E-7 T 11-10-2018 IPR006675 HDIG domain VSVS12_01134 b3943eb2e671a4fd2cca678a0780857b 422 Pfam PF13487 HD domain 229 290 1.1E-13 T 11-10-2018 VSVS12_01134 b3943eb2e671a4fd2cca678a0780857b 422 SMART SM00471 171 308 1.5E-5 T 11-10-2018 IPR003607 HD/PDEase domain VSVS12_01134 b3943eb2e671a4fd2cca678a0780857b 422 Gene3D G3DSA:1.10.3210.10 17 338 1.9E-42 T 11-10-2018 VSVS12_01134 b3943eb2e671a4fd2cca678a0780857b 422 SUPERFAMILY SSF109604 177 325 4.94E-17 T 11-10-2018 VSVS12_00570 d3c98c65964ed14635b6702447f1d6c3 391 Pfam PF06969 HemN C-terminal domain 314 375 7.1E-9 T 11-10-2018 IPR010723 HemN, C-terminal VSVS12_00570 d3c98c65964ed14635b6702447f1d6c3 391 SUPERFAMILY SSF102114 5 387 1.57E-109 T 11-10-2018 VSVS12_00570 d3c98c65964ed14635b6702447f1d6c3 391 Gene3D G3DSA:3.80.30.20 3 307 2.0E-96 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VSVS12_00570 d3c98c65964ed14635b6702447f1d6c3 391 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 8 379 8.3E-139 T 11-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 VSVS12_00570 d3c98c65964ed14635b6702447f1d6c3 391 SMART SM00729 7 228 8.6E-53 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VSVS12_00570 d3c98c65964ed14635b6702447f1d6c3 391 Pfam PF04055 Radical SAM superfamily 12 180 6.8E-18 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VSVS12_01243 f0ec693eb5e57ca56880c6fb341f8508 413 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 7.3E-66 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal VSVS12_01243 f0ec693eb5e57ca56880c6fb341f8508 413 SUPERFAMILY SSF53901 215 412 2.69E-67 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 VSVS12_01243 f0ec693eb5e57ca56880c6fb341f8508 413 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 370 1.0E-36 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal VSVS12_01243 f0ec693eb5e57ca56880c6fb341f8508 413 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 376 389 - T 11-10-2018 IPR018313 Solute-binding protein family 3, conserved site VSVS12_01243 f0ec693eb5e57ca56880c6fb341f8508 413 SMART SM00825 Beta-ketoacyl synthase 6 413 3.8E-15 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VSVS12_01243 f0ec693eb5e57ca56880c6fb341f8508 413 SUPERFAMILY SSF53901 3 252 2.61E-81 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 VSVS12_01243 f0ec693eb5e57ca56880c6fb341f8508 413 Gene3D G3DSA:3.40.47.10 1 255 1.5E-93 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 VSVS12_01243 f0ec693eb5e57ca56880c6fb341f8508 413 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 411 2.9E-194 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 VSVS12_01243 f0ec693eb5e57ca56880c6fb341f8508 413 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 11-10-2018 IPR018201 Beta-ketoacyl synthase, active site VSVS12_01243 f0ec693eb5e57ca56880c6fb341f8508 413 Gene3D G3DSA:3.40.47.10 261 413 5.1E-50 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 VSVS12_01243 f0ec693eb5e57ca56880c6fb341f8508 413 PIRSF PIRSF000447 1 413 4.4E-205 T 11-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 VSVS12_01343 296d534f347ad3318593b9379ea16606 528 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 514 5.1E-300 T 11-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 VSVS12_01343 296d534f347ad3318593b9379ea16606 528 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 528 375.146 T 11-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 VSVS12_01343 296d534f347ad3318593b9379ea16606 528 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 515 0.0 T 11-10-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 VSVS12_00749 69f01db834093d914bb0a0f9beb306d5 222 SUPERFAMILY SSF52980 2 221 5.09E-81 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VSVS12_00749 69f01db834093d914bb0a0f9beb306d5 222 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 6 219 2.3E-104 T 11-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 VSVS12_00749 69f01db834093d914bb0a0f9beb306d5 222 Pfam PF02976 DNA mismatch repair enzyme MutH 54 152 4.0E-34 T 11-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 VSVS12_00749 69f01db834093d914bb0a0f9beb306d5 222 SMART SM00927 54 152 2.4E-64 T 11-10-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 VSVS12_00749 69f01db834093d914bb0a0f9beb306d5 222 Gene3D G3DSA:3.40.600.10 1 221 2.4E-54 T 11-10-2018 IPR037057 DNA mismatch repair MutH/Restriction endonuclease, type II superfamily GO:0003677|GO:0004519 VSVS12_00749 69f01db834093d914bb0a0f9beb306d5 222 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 222 148.124 T 11-10-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 VSVS12_00802 a461d20f96075e2ad2058ac79127587e 242 Gene3D G3DSA:3.30.420.10 73 238 1.1E-16 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VSVS12_00802 a461d20f96075e2ad2058ac79127587e 242 Pfam PF00665 Integrase core domain 77 192 2.4E-27 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VSVS12_00802 a461d20f96075e2ad2058ac79127587e 242 SUPERFAMILY SSF53098 74 230 1.49E-36 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_00786 a461d20f96075e2ad2058ac79127587e 242 Gene3D G3DSA:3.30.420.10 73 238 1.1E-16 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VSVS12_00786 a461d20f96075e2ad2058ac79127587e 242 Pfam PF00665 Integrase core domain 77 192 2.4E-27 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VSVS12_00786 a461d20f96075e2ad2058ac79127587e 242 SUPERFAMILY SSF53098 74 230 1.49E-36 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_01862 a461d20f96075e2ad2058ac79127587e 242 Gene3D G3DSA:3.30.420.10 73 238 1.1E-16 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VSVS12_01862 a461d20f96075e2ad2058ac79127587e 242 Pfam PF00665 Integrase core domain 77 192 2.4E-27 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VSVS12_01862 a461d20f96075e2ad2058ac79127587e 242 SUPERFAMILY SSF53098 74 230 1.49E-36 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_01611 25e31b9c6abb8ce9e17bbe66e0622910 331 Gene3D G3DSA:1.10.3470.10 4 328 6.8E-91 T 11-10-2018 IPR037294 ABC transporter, BtuC-like VSVS12_01611 25e31b9c6abb8ce9e17bbe66e0622910 331 Pfam PF01032 FecCD transport family 23 326 1.8E-79 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VSVS12_01611 25e31b9c6abb8ce9e17bbe66e0622910 331 SUPERFAMILY SSF81345 7 326 2.09E-77 T 11-10-2018 IPR037294 ABC transporter, BtuC-like VSVS12_01611 25e31b9c6abb8ce9e17bbe66e0622910 331 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 3 329 29.75 T 11-10-2018 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 VSVS12_01948 baff0ecdd5058b12e3da66be25e35553 168 SUPERFAMILY SSF55729 34 108 2.83E-10 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_01948 baff0ecdd5058b12e3da66be25e35553 168 Gene3D G3DSA:3.40.630.30 5 157 7.6E-12 T 11-10-2018 VSVS12_01948 baff0ecdd5058b12e3da66be25e35553 168 Pfam PF00583 Acetyltransferase (GNAT) family 25 95 1.4E-9 T 11-10-2018 IPR000182 GNAT domain VSVS12_01596 8769c38b0f615ca2bd61dfb20414827d 403 Gene3D G3DSA:1.10.3210.10 10 327 5.6E-69 T 11-10-2018 VSVS12_01596 8769c38b0f615ca2bd61dfb20414827d 403 Pfam PF13487 HD domain 216 277 2.7E-14 T 11-10-2018 VSVS12_01596 8769c38b0f615ca2bd61dfb20414827d 403 SUPERFAMILY SSF109604 155 326 3.14E-30 T 11-10-2018 VSVS12_01596 8769c38b0f615ca2bd61dfb20414827d 403 Pfam PF11871 Domain of unknown function (DUF3391) 9 132 1.9E-17 T 11-10-2018 IPR021812 Protein of unknown function DUF3391 VSVS12_01596 8769c38b0f615ca2bd61dfb20414827d 403 SMART SM00471 160 296 8.0E-9 T 11-10-2018 IPR003607 HD/PDEase domain VSVS12_02384 339a632d8c6db8c876f9a7a058be0e6a 404 Gene3D G3DSA:1.10.10.10 3 79 3.1E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_02384 339a632d8c6db8c876f9a7a058be0e6a 404 Pfam PF01047 MarR family 22 60 1.3E-5 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VSVS12_02384 339a632d8c6db8c876f9a7a058be0e6a 404 Gene3D G3DSA:3.30.420.40 207 376 4.4E-91 T 11-10-2018 VSVS12_02384 339a632d8c6db8c876f9a7a058be0e6a 404 SUPERFAMILY SSF46785 11 75 6.69E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_02384 339a632d8c6db8c876f9a7a058be0e6a 404 Gene3D G3DSA:3.30.420.40 90 382 4.4E-91 T 11-10-2018 VSVS12_02384 339a632d8c6db8c876f9a7a058be0e6a 404 Pfam PF00480 ROK family 86 390 1.2E-73 T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VSVS12_02384 339a632d8c6db8c876f9a7a058be0e6a 404 SUPERFAMILY SSF53067 85 381 5.4E-54 T 11-10-2018 VSVS12_02384 339a632d8c6db8c876f9a7a058be0e6a 404 ProSitePatterns PS01125 ROK family signature. 217 244 - T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VSVS12_02398 df5375634f6f01b8f813e4cb90383eea 63 Pfam PF14056 Domain of unknown function (DUF4250) 9 62 4.7E-19 T 11-10-2018 IPR025346 Protein of unknown function DUF4250 VSVS12_03063 4bc0bd11e13c589547ba308b2f0515be 434 Gene3D G3DSA:1.10.3860.10 2 413 6.1E-140 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VSVS12_03063 4bc0bd11e13c589547ba308b2f0515be 434 SUPERFAMILY SSF118215 9 407 5.62E-121 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VSVS12_03063 4bc0bd11e13c589547ba308b2f0515be 434 PRINTS PR00173 Glutamate-aspartate symporter signature 298 324 1.4E-49 T 11-10-2018 VSVS12_03063 4bc0bd11e13c589547ba308b2f0515be 434 PRINTS PR00173 Glutamate-aspartate symporter signature 86 111 1.4E-49 T 11-10-2018 VSVS12_03063 4bc0bd11e13c589547ba308b2f0515be 434 PRINTS PR00173 Glutamate-aspartate symporter signature 196 215 1.4E-49 T 11-10-2018 VSVS12_03063 4bc0bd11e13c589547ba308b2f0515be 434 PRINTS PR00173 Glutamate-aspartate symporter signature 56 76 1.4E-49 T 11-10-2018 VSVS12_03063 4bc0bd11e13c589547ba308b2f0515be 434 PRINTS PR00173 Glutamate-aspartate symporter signature 333 352 1.4E-49 T 11-10-2018 VSVS12_03063 4bc0bd11e13c589547ba308b2f0515be 434 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 1.4E-49 T 11-10-2018 VSVS12_03063 4bc0bd11e13c589547ba308b2f0515be 434 PRINTS PR00173 Glutamate-aspartate symporter signature 360 380 1.4E-49 T 11-10-2018 VSVS12_03063 4bc0bd11e13c589547ba308b2f0515be 434 Pfam PF00375 Sodium:dicarboxylate symporter family 9 405 1.1E-129 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 VSVS12_00649 3c7aaef04187547cf3f7001cd49f477f 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 8.1E-45 T 11-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 VSVS12_00649 3c7aaef04187547cf3f7001cd49f477f 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VSVS12_00649 3c7aaef04187547cf3f7001cd49f477f 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 7.2E-26 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VSVS12_00649 3c7aaef04187547cf3f7001cd49f477f 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 7.2E-26 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VSVS12_00649 3c7aaef04187547cf3f7001cd49f477f 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 7.2E-26 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VSVS12_00649 3c7aaef04187547cf3f7001cd49f477f 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 7.2E-26 T 11-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 VSVS12_00649 3c7aaef04187547cf3f7001cd49f477f 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 6.1E-32 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VSVS12_00649 3c7aaef04187547cf3f7001cd49f477f 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 6.1E-32 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VSVS12_00649 3c7aaef04187547cf3f7001cd49f477f 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 6.1E-32 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VSVS12_00649 3c7aaef04187547cf3f7001cd49f477f 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 6.1E-32 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VSVS12_00649 3c7aaef04187547cf3f7001cd49f477f 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 230 240 6.1E-32 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VSVS12_00649 3c7aaef04187547cf3f7001cd49f477f 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 333 83.31 T 11-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 VSVS12_00649 3c7aaef04187547cf3f7001cd49f477f 334 SUPERFAMILY SSF53671 4 333 1.31E-99 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VSVS12_00649 3c7aaef04187547cf3f7001cd49f477f 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 158 330 4.1E-56 T 11-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 VSVS12_00649 3c7aaef04187547cf3f7001cd49f477f 334 Gene3D G3DSA:3.40.50.1370 151 319 5.7E-145 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VSVS12_00649 3c7aaef04187547cf3f7001cd49f477f 334 Gene3D G3DSA:3.40.50.1370 5 329 5.7E-145 T 11-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 VSVS12_00649 3c7aaef04187547cf3f7001cd49f477f 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 332 5.9E-133 T 11-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 VSVS12_03083 984bbd976a8af7b2685f090600b30aa4 340 Pfam PF01757 Acyltransferase family 8 324 6.2E-28 T 11-10-2018 IPR002656 Acyltransferase 3 GO:0016747 VSVS12_03751 2a11e78d2bbe89c6a01ea0c1c03db213 117 Gene3D G3DSA:1.10.3730.20 10 117 2.4E-33 T 11-10-2018 VSVS12_03751 2a11e78d2bbe89c6a01ea0c1c03db213 117 Pfam PF00893 Small Multidrug Resistance protein 12 101 4.8E-24 T 11-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 VSVS12_03751 2a11e78d2bbe89c6a01ea0c1c03db213 117 SUPERFAMILY SSF103481 14 112 2.75E-19 T 11-10-2018 VSVS12_04265 69f0d4e91c468ef63dd970c3ddd2ae1e 640 Gene3D G3DSA:3.40.50.720 419 579 1.7E-33 T 11-10-2018 VSVS12_04265 69f0d4e91c468ef63dd970c3ddd2ae1e 640 Pfam PF02254 TrkA-N domain 422 535 7.4E-23 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VSVS12_04265 69f0d4e91c468ef63dd970c3ddd2ae1e 640 Gene3D G3DSA:1.20.1530.20 2 399 5.4E-78 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily VSVS12_04265 69f0d4e91c468ef63dd970c3ddd2ae1e 640 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 12 303 1.2E-75 T 11-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 VSVS12_04265 69f0d4e91c468ef63dd970c3ddd2ae1e 640 SUPERFAMILY SSF51735 419 559 2.9E-32 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_04265 69f0d4e91c468ef63dd970c3ddd2ae1e 640 Pfam PF00999 Sodium/hydrogen exchanger family 10 390 1.3E-57 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VSVS12_01797 5e2a390571507b93c47b5abf17ac5660 275 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 43 263 9.2E-51 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VSVS12_01797 5e2a390571507b93c47b5abf17ac5660 275 Gene3D G3DSA:3.40.190.10 128 219 1.2E-60 T 11-10-2018 VSVS12_01797 5e2a390571507b93c47b5abf17ac5660 275 SMART SM00062 42 265 1.3E-46 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VSVS12_01797 5e2a390571507b93c47b5abf17ac5660 275 SUPERFAMILY SSF53850 39 263 1.43E-56 T 11-10-2018 VSVS12_01797 5e2a390571507b93c47b5abf17ac5660 275 Gene3D G3DSA:3.40.190.10 34 252 1.2E-60 T 11-10-2018 VSVS12_00929 803e926d905ddbbd90c024ed4672314d 574 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 2.6E-20 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VSVS12_00929 803e926d905ddbbd90c024ed4672314d 574 SUPERFAMILY SSF51621 249 549 1.13E-108 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VSVS12_00929 803e926d905ddbbd90c024ed4672314d 574 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 7.0E-32 T 11-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VSVS12_00929 803e926d905ddbbd90c024ed4672314d 574 SUPERFAMILY SSF47831 24 143 2.35E-32 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 VSVS12_00929 803e926d905ddbbd90c024ed4672314d 574 Gene3D G3DSA:1.10.274.10 21 146 1.4E-79 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 VSVS12_00929 803e926d905ddbbd90c024ed4672314d 574 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 11-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 VSVS12_00929 803e926d905ddbbd90c024ed4672314d 574 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 541 6.5E-123 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 VSVS12_00929 803e926d905ddbbd90c024ed4672314d 574 Gene3D G3DSA:3.50.30.10 4 233 1.4E-79 T 11-10-2018 VSVS12_00929 803e926d905ddbbd90c024ed4672314d 574 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 565 2.4E-245 T 11-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 VSVS12_00929 803e926d905ddbbd90c024ed4672314d 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 1.4E-29 T 11-10-2018 VSVS12_00929 803e926d905ddbbd90c024ed4672314d 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 1.4E-29 T 11-10-2018 VSVS12_00929 803e926d905ddbbd90c024ed4672314d 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 1.4E-29 T 11-10-2018 VSVS12_00929 803e926d905ddbbd90c024ed4672314d 574 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 1.4E-29 T 11-10-2018 VSVS12_00929 803e926d905ddbbd90c024ed4672314d 574 SUPERFAMILY SSF52009 125 243 2.09E-34 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 VSVS12_00929 803e926d905ddbbd90c024ed4672314d 574 Gene3D G3DSA:3.20.20.60 234 574 1.4E-123 T 11-10-2018 VSVS12_00929 803e926d905ddbbd90c024ed4672314d 574 PIRSF PIRSF000732 1 574 1.2E-217 T 11-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 VSVS12_00913 9b46362e9d9bad22ebc8b560ad480cad 278 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 102 197 5.1E-43 T 11-10-2018 IPR012997 Rare lipoprotein A VSVS12_00913 9b46362e9d9bad22ebc8b560ad480cad 278 SUPERFAMILY SSF110997 207 276 4.58E-12 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VSVS12_00913 9b46362e9d9bad22ebc8b560ad480cad 278 Pfam PF05036 Sporulation related domain 207 276 1.0E-8 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 VSVS12_00913 9b46362e9d9bad22ebc8b560ad480cad 278 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 22 192 24.384 T 11-10-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 VSVS12_00913 9b46362e9d9bad22ebc8b560ad480cad 278 Pfam PF03330 Lytic transglycolase 100 189 4.7E-26 T 11-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain VSVS12_00913 9b46362e9d9bad22ebc8b560ad480cad 278 Gene3D G3DSA:2.40.40.10 99 193 3.1E-37 T 11-10-2018 IPR036908 RlpA-like domain superfamily VSVS12_00913 9b46362e9d9bad22ebc8b560ad480cad 278 Gene3D G3DSA:3.30.70.1070 207 277 6.0E-6 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VSVS12_00913 9b46362e9d9bad22ebc8b560ad480cad 278 SUPERFAMILY SSF50685 109 190 5.23E-9 T 11-10-2018 IPR036908 RlpA-like domain superfamily VSVS12_03222 f2c2defc742f9a88742910b93bfc3969 112 Gene3D G3DSA:3.10.450.40 1 109 5.7E-17 T 11-10-2018 VSVS12_03222 f2c2defc742f9a88742910b93bfc3969 112 Pfam PF04965 Gene 25-like lysozyme 15 96 1.9E-14 T 11-10-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD VSVS12_03222 f2c2defc742f9a88742910b93bfc3969 112 SUPERFAMILY SSF160719 12 106 6.02E-20 T 11-10-2018 VSVS12_00890 885cae266bf2d4f57d505d5d96a545d8 247 Pfam PF00929 Exonuclease 13 180 2.9E-38 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VSVS12_00890 885cae266bf2d4f57d505d5d96a545d8 247 SMART SM00479 11 189 3.5E-51 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VSVS12_00890 885cae266bf2d4f57d505d5d96a545d8 247 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 11 247 4.3E-100 T 11-10-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VSVS12_00890 885cae266bf2d4f57d505d5d96a545d8 247 SUPERFAMILY SSF53098 8 190 5.6E-55 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_00890 885cae266bf2d4f57d505d5d96a545d8 247 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 10 230 5.9E-79 T 11-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VSVS12_00890 885cae266bf2d4f57d505d5d96a545d8 247 Gene3D G3DSA:3.30.420.10 4 193 1.2E-58 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VSVS12_00111 bf4ce841fb5543acf9d54b9e076237c3 1041 SUPERFAMILY SSF82714 701 782 1.96E-17 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VSVS12_00111 bf4ce841fb5543acf9d54b9e076237c3 1041 Gene3D G3DSA:3.30.70.1440 648 843 2.7E-286 T 11-10-2018 VSVS12_00111 bf4ce841fb5543acf9d54b9e076237c3 1041 SUPERFAMILY SSF82866 290 489 3.66E-46 T 11-10-2018 VSVS12_00111 bf4ce841fb5543acf9d54b9e076237c3 1041 SUPERFAMILY SSF82866 782 1005 1.96E-46 T 11-10-2018 VSVS12_00111 bf4ce841fb5543acf9d54b9e076237c3 1041 Gene3D G3DSA:3.30.2090.10 178 268 2.7E-286 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VSVS12_00111 bf4ce841fb5543acf9d54b9e076237c3 1041 Gene3D G3DSA:1.20.1640.10 10 500 2.7E-286 T 11-10-2018 VSVS12_00111 bf4ce841fb5543acf9d54b9e076237c3 1041 Gene3D G3DSA:3.30.2090.10 698 786 2.7E-286 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VSVS12_00111 bf4ce841fb5543acf9d54b9e076237c3 1041 Gene3D G3DSA:1.20.1640.10 501 1001 2.7E-286 T 11-10-2018 VSVS12_00111 bf4ce841fb5543acf9d54b9e076237c3 1041 SUPERFAMILY SSF82714 182 263 9.68E-16 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VSVS12_00111 bf4ce841fb5543acf9d54b9e076237c3 1041 SUPERFAMILY SSF82693 136 323 2.22E-22 T 11-10-2018 VSVS12_00111 bf4ce841fb5543acf9d54b9e076237c3 1041 SUPERFAMILY SSF82693 553 650 3.31E-21 T 11-10-2018 VSVS12_00111 bf4ce841fb5543acf9d54b9e076237c3 1041 Gene3D G3DSA:3.30.70.1430 40 794 2.7E-286 T 11-10-2018 VSVS12_00111 bf4ce841fb5543acf9d54b9e076237c3 1041 PRINTS PR00702 Acriflavin resistance protein family signature 329 352 7.9E-75 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_00111 bf4ce841fb5543acf9d54b9e076237c3 1041 PRINTS PR00702 Acriflavin resistance protein family signature 384 408 7.9E-75 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_00111 bf4ce841fb5543acf9d54b9e076237c3 1041 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 7.9E-75 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_00111 bf4ce841fb5543acf9d54b9e076237c3 1041 PRINTS PR00702 Acriflavin resistance protein family signature 603 617 7.9E-75 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_00111 bf4ce841fb5543acf9d54b9e076237c3 1041 PRINTS PR00702 Acriflavin resistance protein family signature 356 377 7.9E-75 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_00111 bf4ce841fb5543acf9d54b9e076237c3 1041 PRINTS PR00702 Acriflavin resistance protein family signature 437 460 7.9E-75 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_00111 bf4ce841fb5543acf9d54b9e076237c3 1041 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 7.9E-75 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_00111 bf4ce841fb5543acf9d54b9e076237c3 1041 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 7.9E-75 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_00111 bf4ce841fb5543acf9d54b9e076237c3 1041 PRINTS PR00702 Acriflavin resistance protein family signature 462 485 7.9E-75 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_00111 bf4ce841fb5543acf9d54b9e076237c3 1041 Gene3D G3DSA:3.30.70.1430 555 647 2.7E-286 T 11-10-2018 VSVS12_00111 bf4ce841fb5543acf9d54b9e076237c3 1041 Pfam PF00873 AcrB/AcrD/AcrF family 4 1003 4.7E-271 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_00111 bf4ce841fb5543acf9d54b9e076237c3 1041 Gene3D G3DSA:3.30.70.1320 134 325 2.7E-286 T 11-10-2018 VSVS12_00111 bf4ce841fb5543acf9d54b9e076237c3 1041 SUPERFAMILY SSF82693 41 130 7.06E-23 T 11-10-2018 VSVS12_03979 16777f217dfd5216f8342f265273a6d0 311 Pfam PF01032 FecCD transport family 8 305 2.6E-62 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VSVS12_03979 16777f217dfd5216f8342f265273a6d0 311 Gene3D G3DSA:1.10.3470.10 1 310 2.3E-61 T 11-10-2018 IPR037294 ABC transporter, BtuC-like VSVS12_03979 16777f217dfd5216f8342f265273a6d0 311 SUPERFAMILY SSF81345 4 305 2.09E-63 T 11-10-2018 IPR037294 ABC transporter, BtuC-like VSVS12_02169 75374c663a5a946c67e3f7359591cda9 230 Pfam PF00849 RNA pseudouridylate synthase 55 199 1.2E-15 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VSVS12_02169 75374c663a5a946c67e3f7359591cda9 230 SUPERFAMILY SSF55120 51 229 7.84E-45 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VSVS12_02169 75374c663a5a946c67e3f7359591cda9 230 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 59 229 1.4E-56 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VSVS12_02169 75374c663a5a946c67e3f7359591cda9 230 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 90 104 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VSVS12_02169 75374c663a5a946c67e3f7359591cda9 230 Gene3D G3DSA:3.30.70.580 43 118 6.3E-27 T 11-10-2018 VSVS12_02169 75374c663a5a946c67e3f7359591cda9 230 Gene3D G3DSA:3.30.70.1560 119 218 2.4E-39 T 11-10-2018 VSVS12_01682 e0c50f003fd0867cc4793172c93c1dd7 475 TIGRFAM TIGR00780 ccoN: cytochrome c oxidase, cbb3-type, subunit I 10 465 2.8E-227 T 11-10-2018 IPR004677 Cytochrome c oxidase cbb3-type, subunit I GO:0004129|GO:0045278|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 VSVS12_01682 e0c50f003fd0867cc4793172c93c1dd7 475 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 205 260 - T 11-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_01682 e0c50f003fd0867cc4793172c93c1dd7 475 SUPERFAMILY SSF81442 11 464 1.05E-120 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_01682 e0c50f003fd0867cc4793172c93c1dd7 475 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 15 445 3.3E-114 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_01682 e0c50f003fd0867cc4793172c93c1dd7 475 Gene3D G3DSA:1.20.210.10 4 471 4.9E-204 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_00304 b19339727a5c9a24da1d96373232057a 310 Pfam PF03466 LysR substrate binding domain 86 302 5.6E-41 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_00304 b19339727a5c9a24da1d96373232057a 310 Gene3D G3DSA:3.40.190.10 161 269 9.2E-59 T 11-10-2018 VSVS12_00304 b19339727a5c9a24da1d96373232057a 310 Gene3D G3DSA:1.10.10.10 1 87 2.1E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_00304 b19339727a5c9a24da1d96373232057a 310 SUPERFAMILY SSF46785 3 110 9.35E-23 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_00304 b19339727a5c9a24da1d96373232057a 310 Gene3D G3DSA:3.40.190.10 89 298 9.2E-59 T 11-10-2018 VSVS12_00304 b19339727a5c9a24da1d96373232057a 310 SUPERFAMILY SSF53850 87 305 1.07E-39 T 11-10-2018 VSVS12_00304 b19339727a5c9a24da1d96373232057a 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 61 4.2E-20 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_02322 4186de6ee9257d72c54bd8f66d59597f 231 Pfam PF13247 4Fe-4S dicluster domain 92 189 1.2E-26 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VSVS12_02322 4186de6ee9257d72c54bd8f66d59597f 231 SUPERFAMILY SSF54862 43 226 5.44E-64 T 11-10-2018 VSVS12_02322 4186de6ee9257d72c54bd8f66d59597f 231 TIGRFAM TIGR03149 cyt_nit_nrfC: cytochrome c nitrite reductase, Fe-S protein 2 230 3.7E-127 T 11-10-2018 IPR017567 Cytochrome c nitrite reductase, Fe-S protein VSVS12_02322 4186de6ee9257d72c54bd8f66d59597f 231 Gene3D G3DSA:3.30.70.20 35 230 1.3E-58 T 11-10-2018 VSVS12_02322 4186de6ee9257d72c54bd8f66d59597f 231 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 133 144 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VSVS12_01334 4039dbbd797d5afa93e85f5061a49803 717 SUPERFAMILY SSF75138 229 353 6.28E-24 T 11-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily VSVS12_01334 4039dbbd797d5afa93e85f5061a49803 717 SUPERFAMILY SSF53659 392 709 1.52E-95 T 11-10-2018 VSVS12_01334 4039dbbd797d5afa93e85f5061a49803 717 PIRSF PIRSF006107 1 714 0.0 T 11-10-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 VSVS12_01334 4039dbbd797d5afa93e85f5061a49803 717 Pfam PF01515 Phosphate acetyl/butaryl transferase 391 706 6.2E-125 T 11-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 VSVS12_01334 4039dbbd797d5afa93e85f5061a49803 717 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 406 706 2.7E-132 T 11-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 VSVS12_01334 4039dbbd797d5afa93e85f5061a49803 717 SUPERFAMILY SSF52540 1 240 2.2E-30 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01334 4039dbbd797d5afa93e85f5061a49803 717 Gene3D G3DSA:3.40.1390.20 225 365 2.8E-13 T 11-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily VSVS12_01334 4039dbbd797d5afa93e85f5061a49803 717 Gene3D G3DSA:3.40.50.10750 529 682 5.1E-134 T 11-10-2018 VSVS12_01334 4039dbbd797d5afa93e85f5061a49803 717 Gene3D G3DSA:3.40.50.10950 398 709 5.1E-134 T 11-10-2018 VSVS12_01334 4039dbbd797d5afa93e85f5061a49803 717 Pfam PF13500 AAA domain 3 229 2.4E-51 T 11-10-2018 VSVS12_01334 4039dbbd797d5afa93e85f5061a49803 717 Gene3D G3DSA:3.40.50.300 5 215 1.9E-14 T 11-10-2018 VSVS12_01334 4039dbbd797d5afa93e85f5061a49803 717 Pfam PF07085 DRTGG domain 233 344 1.5E-27 T 11-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 VSVS12_04381 374c67b78ee7ba462b1224b8a5a8cda4 719 Pfam PF01751 Toprim domain 3 130 2.1E-18 T 11-10-2018 IPR006171 TOPRIM domain VSVS12_04381 374c67b78ee7ba462b1224b8a5a8cda4 719 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 306 321 - T 11-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 VSVS12_04381 374c67b78ee7ba462b1224b8a5a8cda4 719 SMART SM00437 269 562 2.1E-62 T 11-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 VSVS12_04381 374c67b78ee7ba462b1224b8a5a8cda4 719 Gene3D G3DSA:2.70.20.10 213 487 1.6E-148 T 11-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 VSVS12_04381 374c67b78ee7ba462b1224b8a5a8cda4 719 Gene3D G3DSA:1.10.460.10 159 606 1.6E-148 T 11-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VSVS12_04381 374c67b78ee7ba462b1224b8a5a8cda4 719 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 189 207 7.2E-26 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VSVS12_04381 374c67b78ee7ba462b1224b8a5a8cda4 719 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 98 111 7.2E-26 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VSVS12_04381 374c67b78ee7ba462b1224b8a5a8cda4 719 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 521 535 7.2E-26 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VSVS12_04381 374c67b78ee7ba462b1224b8a5a8cda4 719 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 312 321 7.2E-26 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VSVS12_04381 374c67b78ee7ba462b1224b8a5a8cda4 719 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 394 410 7.2E-26 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VSVS12_04381 374c67b78ee7ba462b1224b8a5a8cda4 719 SMART SM00436 124 219 3.2E-28 T 11-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 VSVS12_04381 374c67b78ee7ba462b1224b8a5a8cda4 719 SMART SM00493 1 124 4.9E-20 T 11-10-2018 IPR006171 TOPRIM domain VSVS12_04381 374c67b78ee7ba462b1224b8a5a8cda4 719 Pfam PF01131 DNA topoisomerase 151 597 6.8E-109 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VSVS12_04381 374c67b78ee7ba462b1224b8a5a8cda4 719 SUPERFAMILY SSF56712 1 611 9.42E-165 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain VSVS12_04381 374c67b78ee7ba462b1224b8a5a8cda4 719 Gene3D G3DSA:3.40.50.140 1 151 1.9E-48 T 11-10-2018 VSVS12_04381 374c67b78ee7ba462b1224b8a5a8cda4 719 Gene3D G3DSA:1.10.290.10 278 408 1.6E-148 T 11-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 VSVS12_04381 374c67b78ee7ba462b1224b8a5a8cda4 719 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 669 9.9E-205 T 11-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 VSVS12_04507 374c67b78ee7ba462b1224b8a5a8cda4 719 Pfam PF01751 Toprim domain 3 130 2.1E-18 T 11-10-2018 IPR006171 TOPRIM domain VSVS12_04507 374c67b78ee7ba462b1224b8a5a8cda4 719 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 306 321 - T 11-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 VSVS12_04507 374c67b78ee7ba462b1224b8a5a8cda4 719 SMART SM00437 269 562 2.1E-62 T 11-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 VSVS12_04507 374c67b78ee7ba462b1224b8a5a8cda4 719 Gene3D G3DSA:2.70.20.10 213 487 1.6E-148 T 11-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 VSVS12_04507 374c67b78ee7ba462b1224b8a5a8cda4 719 Gene3D G3DSA:1.10.460.10 159 606 1.6E-148 T 11-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VSVS12_04507 374c67b78ee7ba462b1224b8a5a8cda4 719 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 189 207 7.2E-26 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VSVS12_04507 374c67b78ee7ba462b1224b8a5a8cda4 719 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 98 111 7.2E-26 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VSVS12_04507 374c67b78ee7ba462b1224b8a5a8cda4 719 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 521 535 7.2E-26 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VSVS12_04507 374c67b78ee7ba462b1224b8a5a8cda4 719 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 312 321 7.2E-26 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VSVS12_04507 374c67b78ee7ba462b1224b8a5a8cda4 719 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 394 410 7.2E-26 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VSVS12_04507 374c67b78ee7ba462b1224b8a5a8cda4 719 SMART SM00436 124 219 3.2E-28 T 11-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 VSVS12_04507 374c67b78ee7ba462b1224b8a5a8cda4 719 SMART SM00493 1 124 4.9E-20 T 11-10-2018 IPR006171 TOPRIM domain VSVS12_04507 374c67b78ee7ba462b1224b8a5a8cda4 719 Pfam PF01131 DNA topoisomerase 151 597 6.8E-109 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VSVS12_04507 374c67b78ee7ba462b1224b8a5a8cda4 719 SUPERFAMILY SSF56712 1 611 9.42E-165 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain VSVS12_04507 374c67b78ee7ba462b1224b8a5a8cda4 719 Gene3D G3DSA:3.40.50.140 1 151 1.9E-48 T 11-10-2018 VSVS12_04507 374c67b78ee7ba462b1224b8a5a8cda4 719 Gene3D G3DSA:1.10.290.10 278 408 1.6E-148 T 11-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 VSVS12_04507 374c67b78ee7ba462b1224b8a5a8cda4 719 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 669 9.9E-205 T 11-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 VSVS12_02789 c9426c258f19e081f4835b1df22b298c 338 Gene3D G3DSA:3.30.420.40 3 315 4.5E-129 T 11-10-2018 VSVS12_02789 c9426c258f19e081f4835b1df22b298c 338 Pfam PF00814 Glycoprotease family 24 307 5.4E-102 T 11-10-2018 IPR000905 Gcp-like domain VSVS12_02789 c9426c258f19e081f4835b1df22b298c 338 Gene3D G3DSA:3.30.420.40 129 293 4.5E-129 T 11-10-2018 VSVS12_02789 c9426c258f19e081f4835b1df22b298c 338 SUPERFAMILY SSF53067 101 309 2.78E-42 T 11-10-2018 VSVS12_02789 c9426c258f19e081f4835b1df22b298c 338 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 3.6E-132 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 VSVS12_02789 c9426c258f19e081f4835b1df22b298c 338 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 62.498 T 11-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 VSVS12_02789 c9426c258f19e081f4835b1df22b298c 338 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 5 306 3.9E-122 T 11-10-2018 IPR017861 Kae1/TsaD family VSVS12_02789 c9426c258f19e081f4835b1df22b298c 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 1.3E-50 T 11-10-2018 IPR017861 Kae1/TsaD family VSVS12_02789 c9426c258f19e081f4835b1df22b298c 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 1.3E-50 T 11-10-2018 IPR017861 Kae1/TsaD family VSVS12_02789 c9426c258f19e081f4835b1df22b298c 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 1.3E-50 T 11-10-2018 IPR017861 Kae1/TsaD family VSVS12_02789 c9426c258f19e081f4835b1df22b298c 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 1.3E-50 T 11-10-2018 IPR017861 Kae1/TsaD family VSVS12_02789 c9426c258f19e081f4835b1df22b298c 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 1.3E-50 T 11-10-2018 IPR017861 Kae1/TsaD family VSVS12_02789 c9426c258f19e081f4835b1df22b298c 338 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 1.3E-50 T 11-10-2018 IPR017861 Kae1/TsaD family VSVS12_02789 c9426c258f19e081f4835b1df22b298c 338 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 11-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 VSVS12_02789 c9426c258f19e081f4835b1df22b298c 338 SUPERFAMILY SSF53067 3 123 6.47E-31 T 11-10-2018 VSVS12_02856 ea73bd0648cf020508a9108816b193e6 234 Pfam PF00005 ABC transporter 18 157 1.0E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_02856 ea73bd0648cf020508a9108816b193e6 234 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 4 210 2.7E-101 T 11-10-2018 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0016021|GO:0042626|GO:0071934 VSVS12_02856 ea73bd0648cf020508a9108816b193e6 234 SMART SM00382 24 215 2.0E-18 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_02856 ea73bd0648cf020508a9108816b193e6 234 Gene3D G3DSA:3.40.50.300 1 234 8.1E-64 T 11-10-2018 VSVS12_02856 ea73bd0648cf020508a9108816b193e6 234 SUPERFAMILY SSF52540 1 231 3.63E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02856 ea73bd0648cf020508a9108816b193e6 234 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_02582 f5867e18e6b7f995babccafeacfd8093 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.544 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 VSVS12_02582 f5867e18e6b7f995babccafeacfd8093 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 11-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 VSVS12_02582 f5867e18e6b7f995babccafeacfd8093 142 PIRSF PIRSF002181 1 142 1.5E-52 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 VSVS12_02582 f5867e18e6b7f995babccafeacfd8093 142 Pfam PF00572 Ribosomal protein L13 15 138 1.2E-56 T 11-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 VSVS12_02582 f5867e18e6b7f995babccafeacfd8093 142 SUPERFAMILY SSF52161 1 140 3.4E-60 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 VSVS12_02582 f5867e18e6b7f995babccafeacfd8093 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 5.8E-65 T 11-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02582 f5867e18e6b7f995babccafeacfd8093 142 Gene3D G3DSA:3.90.1180.10 1 142 6.7E-64 T 11-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 VSVS12_00751 a8bc22565bfa1f8cb29cd4343aa141b0 748 SUPERFAMILY SSF55781 2 170 6.11E-33 T 11-10-2018 VSVS12_00751 a8bc22565bfa1f8cb29cd4343aa141b0 748 Pfam PF05524 PEP-utilising enzyme, N-terminal 172 294 2.9E-24 T 11-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 VSVS12_00751 a8bc22565bfa1f8cb29cd4343aa141b0 748 Gene3D G3DSA:3.20.20.60 400 740 1.0E-101 T 11-10-2018 VSVS12_00751 a8bc22565bfa1f8cb29cd4343aa141b0 748 SUPERFAMILY SSF51621 423 714 1.97E-95 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VSVS12_00751 a8bc22565bfa1f8cb29cd4343aa141b0 748 Gene3D G3DSA:3.30.450.40 1 163 6.5E-43 T 11-10-2018 IPR029016 GAF-like domain superfamily VSVS12_00751 a8bc22565bfa1f8cb29cd4343aa141b0 748 SMART SM00065 17 163 7.0E-22 T 11-10-2018 IPR003018 GAF domain GO:0005515 VSVS12_00751 a8bc22565bfa1f8cb29cd4343aa141b0 748 SUPERFAMILY SSF52009 293 413 1.44E-25 T 11-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 VSVS12_00751 a8bc22565bfa1f8cb29cd4343aa141b0 748 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 351 362 - T 11-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 VSVS12_00751 a8bc22565bfa1f8cb29cd4343aa141b0 748 Pfam PF00391 PEP-utilising enzyme, mobile domain 319 391 2.3E-15 T 11-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 VSVS12_00751 a8bc22565bfa1f8cb29cd4343aa141b0 748 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 171 728 1.4E-132 T 11-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 VSVS12_00751 a8bc22565bfa1f8cb29cd4343aa141b0 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 612 627 6.1E-23 T 11-10-2018 VSVS12_00751 a8bc22565bfa1f8cb29cd4343aa141b0 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 665 677 6.1E-23 T 11-10-2018 VSVS12_00751 a8bc22565bfa1f8cb29cd4343aa141b0 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 6.1E-23 T 11-10-2018 VSVS12_00751 a8bc22565bfa1f8cb29cd4343aa141b0 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 629 644 6.1E-23 T 11-10-2018 VSVS12_00751 a8bc22565bfa1f8cb29cd4343aa141b0 748 Gene3D G3DSA:3.50.30.10 173 399 2.0E-58 T 11-10-2018 VSVS12_00751 a8bc22565bfa1f8cb29cd4343aa141b0 748 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 612 630 - T 11-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 VSVS12_00751 a8bc22565bfa1f8cb29cd4343aa141b0 748 Gene3D G3DSA:1.10.274.10 190 314 2.0E-58 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 VSVS12_00751 a8bc22565bfa1f8cb29cd4343aa141b0 748 SUPERFAMILY SSF47831 200 311 7.19E-27 T 11-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 VSVS12_00751 a8bc22565bfa1f8cb29cd4343aa141b0 748 Pfam PF01590 GAF domain 18 153 2.0E-14 T 11-10-2018 IPR003018 GAF domain GO:0005515 VSVS12_00751 a8bc22565bfa1f8cb29cd4343aa141b0 748 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 424 706 2.6E-93 T 11-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 VSVS12_03123 7b8af8d400e8ade2a44bf640b59d0e54 109 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 3 109 1.2E-39 T 11-10-2018 IPR004624 PhnA protein VSVS12_03123 7b8af8d400e8ade2a44bf640b59d0e54 109 Gene3D G3DSA:2.30.30.40 40 109 1.7E-26 T 11-10-2018 VSVS12_03123 7b8af8d400e8ade2a44bf640b59d0e54 109 SUPERFAMILY SSF57783 2 37 8.16E-14 T 11-10-2018 VSVS12_03123 7b8af8d400e8ade2a44bf640b59d0e54 109 Pfam PF03831 PhnA domain 41 109 2.2E-25 T 11-10-2018 IPR013988 PhnA protein, C-terminal VSVS12_03123 7b8af8d400e8ade2a44bf640b59d0e54 109 SUPERFAMILY SSF82057 37 109 1.51E-23 T 11-10-2018 VSVS12_03123 7b8af8d400e8ade2a44bf640b59d0e54 109 Gene3D G3DSA:2.20.25.10 1 39 2.6E-18 T 11-10-2018 VSVS12_03123 7b8af8d400e8ade2a44bf640b59d0e54 109 Pfam PF08274 PhnA Zinc-Ribbon 3 30 1.4E-14 T 11-10-2018 IPR013987 PhnA protein, N-terminal VSVS12_00045 d4511f829ea33e8dcf123248c1f0f675 392 Pfam PF07219 HemY protein N-terminus 26 130 1.3E-25 T 11-10-2018 IPR010817 HemY, N-terminal VSVS12_00045 d4511f829ea33e8dcf123248c1f0f675 392 SUPERFAMILY SSF48452 304 390 4.61E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_00045 d4511f829ea33e8dcf123248c1f0f675 392 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 2 386 3.2E-105 T 11-10-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 VSVS12_00045 d4511f829ea33e8dcf123248c1f0f675 392 SUPERFAMILY SSF48452 86 214 8.54E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_00761 e32bd3c8925125297671b85e8c481a1e 946 SUPERFAMILY SSF50677 204 411 2.41E-52 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VSVS12_00761 e32bd3c8925125297671b85e8c481a1e 946 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 5.2E-32 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VSVS12_00761 e32bd3c8925125297671b85e8c481a1e 946 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 535 548 5.2E-32 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VSVS12_00761 e32bd3c8925125297671b85e8c481a1e 946 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 409 424 5.2E-32 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VSVS12_00761 e32bd3c8925125297671b85e8c481a1e 946 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 570 579 5.2E-32 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VSVS12_00761 e32bd3c8925125297671b85e8c481a1e 946 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 241 264 5.2E-32 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VSVS12_00761 e32bd3c8925125297671b85e8c481a1e 946 Pfam PF06827 Zinc finger found in FPG and IleRS 906 934 3.3E-7 T 11-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 VSVS12_00761 e32bd3c8925125297671b85e8c481a1e 946 Gene3D G3DSA:3.90.740.10 195 416 7.7E-241 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VSVS12_00761 e32bd3c8925125297671b85e8c481a1e 946 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 937 21.493 T 11-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 VSVS12_00761 e32bd3c8925125297671b85e8c481a1e 946 SUPERFAMILY SSF52374 4 656 1.15E-137 T 11-10-2018 VSVS12_00761 e32bd3c8925125297671b85e8c481a1e 946 Gene3D G3DSA:1.10.730.20 649 938 6.8E-87 T 11-10-2018 VSVS12_00761 e32bd3c8925125297671b85e8c481a1e 946 Gene3D G3DSA:3.40.50.620 25 638 7.7E-241 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VSVS12_00761 e32bd3c8925125297671b85e8c481a1e 946 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 649 1.7E-215 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 VSVS12_00761 e32bd3c8925125297671b85e8c481a1e 946 SUPERFAMILY SSF47323 661 937 5.05E-76 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VSVS12_00761 e32bd3c8925125297671b85e8c481a1e 946 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VSVS12_00761 e32bd3c8925125297671b85e8c481a1e 946 Pfam PF08264 Anticodon-binding domain of tRNA 694 849 8.0E-26 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 VSVS12_00761 e32bd3c8925125297671b85e8c481a1e 946 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 851 1.3E-295 T 11-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 VSVS12_01150 264006303a8e72da89628ab1c87300e5 162 Gene3D G3DSA:3.40.35.10 1 162 1.6E-44 T 11-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 VSVS12_01150 264006303a8e72da89628ab1c87300e5 162 SUPERFAMILY SSF52728 3 160 2.62E-45 T 11-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 VSVS12_01150 264006303a8e72da89628ab1c87300e5 162 Pfam PF03830 PTS system sorbose subfamily IIB component 4 149 9.6E-42 T 11-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 VSVS12_03585 e50597920b246236168ac5b435565e03 857 PRINTS PR00397 Sirohaem Fe-binding site signature 679 697 7.3E-6 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VSVS12_03585 e50597920b246236168ac5b435565e03 857 PRINTS PR00397 Sirohaem Fe-binding site signature 636 654 7.3E-6 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VSVS12_03585 e50597920b246236168ac5b435565e03 857 SUPERFAMILY SSF56014 633 808 1.44E-45 T 11-10-2018 VSVS12_03585 e50597920b246236168ac5b435565e03 857 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 1.3E-10 T 11-10-2018 VSVS12_03585 e50597920b246236168ac5b435565e03 857 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 105 114 1.3E-10 T 11-10-2018 VSVS12_03585 e50597920b246236168ac5b435565e03 857 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 1.3E-10 T 11-10-2018 VSVS12_03585 e50597920b246236168ac5b435565e03 857 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 1.3E-10 T 11-10-2018 VSVS12_03585 e50597920b246236168ac5b435565e03 857 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 633 767 1.3E-14 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VSVS12_03585 e50597920b246236168ac5b435565e03 857 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 679 695 - T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VSVS12_03585 e50597920b246236168ac5b435565e03 857 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 287 1.4E-53 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VSVS12_03585 e50597920b246236168ac5b435565e03 857 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.3E-14 T 11-10-2018 VSVS12_03585 e50597920b246236168ac5b435565e03 857 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 1.3E-14 T 11-10-2018 VSVS12_03585 e50597920b246236168ac5b435565e03 857 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 1.3E-14 T 11-10-2018 VSVS12_03585 e50597920b246236168ac5b435565e03 857 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 1.3E-14 T 11-10-2018 VSVS12_03585 e50597920b246236168ac5b435565e03 857 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 1.3E-14 T 11-10-2018 VSVS12_03585 e50597920b246236168ac5b435565e03 857 SUPERFAMILY SSF55124 502 629 4.36E-30 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VSVS12_03585 e50597920b246236168ac5b435565e03 857 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 800 0.0 T 11-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 VSVS12_03585 e50597920b246236168ac5b435565e03 857 Gene3D G3DSA:3.50.50.60 7 283 8.3E-83 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_03585 e50597920b246236168ac5b435565e03 857 SUPERFAMILY SSF51905 149 309 2.16E-25 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_03585 e50597920b246236168ac5b435565e03 857 PIRSF PIRSF037149 1 835 0.0 T 11-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 VSVS12_03585 e50597920b246236168ac5b435565e03 857 Gene3D G3DSA:1.10.10.1100 423 477 4.7E-12 T 11-10-2018 VSVS12_03585 e50597920b246236168ac5b435565e03 857 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 560 622 4.1E-11 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VSVS12_03585 e50597920b246236168ac5b435565e03 857 SUPERFAMILY SSF51905 3 188 1.23E-39 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_03585 e50597920b246236168ac5b435565e03 857 Gene3D G3DSA:3.50.50.60 110 246 8.3E-83 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_03585 e50597920b246236168ac5b435565e03 857 Gene3D G3DSA:3.30.413.10 631 785 2.8E-31 T 11-10-2018 VSVS12_03585 e50597920b246236168ac5b435565e03 857 Pfam PF04324 BFD-like [2Fe-2S] binding domain 423 471 2.1E-14 T 11-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain VSVS12_01375 96a6b1b1b78aed82b8f2c1dc2253208f 362 Gene3D G3DSA:3.60.60.10 21 352 9.9E-109 T 11-10-2018 VSVS12_01375 96a6b1b1b78aed82b8f2c1dc2253208f 362 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 21 341 4.9E-71 T 11-10-2018 IPR029132 Choloylglycine hydrolase/NAAA C-terminal VSVS12_01375 96a6b1b1b78aed82b8f2c1dc2253208f 362 SUPERFAMILY SSF56235 21 346 3.55E-93 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VSVS12_03728 0b298f0607ec1d571bb6c55faaf93096 817 Pfam PF00343 Carbohydrate phosphorylase 99 812 0.0 T 11-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 VSVS12_03728 0b298f0607ec1d571bb6c55faaf93096 817 Gene3D G3DSA:3.40.50.2000 5 474 1.3E-190 T 11-10-2018 VSVS12_03728 0b298f0607ec1d571bb6c55faaf93096 817 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 11 812 0.0 T 11-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 VSVS12_03728 0b298f0607ec1d571bb6c55faaf93096 817 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 656 668 - T 11-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 VSVS12_03728 0b298f0607ec1d571bb6c55faaf93096 817 Gene3D G3DSA:3.40.50.2000 475 797 5.7E-140 T 11-10-2018 VSVS12_03728 0b298f0607ec1d571bb6c55faaf93096 817 SUPERFAMILY SSF53756 7 815 6.2E-304 T 11-10-2018 VSVS12_03728 0b298f0607ec1d571bb6c55faaf93096 817 PIRSF PIRSF000460 1 817 1.7E-209 T 11-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 VSVS12_00462 72313c9a284d7cac9be9ce7dd56293ac 64 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 2 58 4.1E-32 T 11-10-2018 IPR012658 Conserved hypothetical protein CHP02443 VSVS12_00462 72313c9a284d7cac9be9ce7dd56293ac 64 Pfam PF09526 Probable metal-binding protein (DUF2387) 1 54 7.2E-21 T 11-10-2018 IPR012658 Conserved hypothetical protein CHP02443 VSVS12_02449 fc67010ae20b6cbe12a73636773e6541 422 PIRSF PIRSF001549 2 421 3.6E-123 T 11-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 VSVS12_02449 fc67010ae20b6cbe12a73636773e6541 422 SUPERFAMILY SSF52954 327 422 5.4E-25 T 11-10-2018 VSVS12_02449 fc67010ae20b6cbe12a73636773e6541 422 Pfam PF13393 Histidyl-tRNA synthetase 10 312 9.3E-46 T 11-10-2018 VSVS12_02449 fc67010ae20b6cbe12a73636773e6541 422 SUPERFAMILY SSF55681 5 320 5.18E-104 T 11-10-2018 VSVS12_02449 fc67010ae20b6cbe12a73636773e6541 422 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 420 33.547 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 VSVS12_02449 fc67010ae20b6cbe12a73636773e6541 422 Gene3D G3DSA:3.40.50.800 326 422 2.2E-22 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily VSVS12_02449 fc67010ae20b6cbe12a73636773e6541 422 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 409 2.6E-157 T 11-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 VSVS12_02449 fc67010ae20b6cbe12a73636773e6541 422 Gene3D G3DSA:3.30.930.10 2 323 6.4E-120 T 11-10-2018 VSVS12_02449 fc67010ae20b6cbe12a73636773e6541 422 Pfam PF03129 Anticodon binding domain 339 419 2.9E-8 T 11-10-2018 IPR004154 Anticodon-binding VSVS12_03461 308fdadf0dde40315d87eebaffbf0fb2 320 Pfam PF14027 Protein of unknown function (DUF4243) 23 295 6.7E-35 T 11-10-2018 IPR025337 Questin oxidase-like GO:0016491 VSVS12_00507 a817e2e12e44c921f1c51971a977edd8 475 Gene3D G3DSA:3.40.50.300 6 239 1.1E-71 T 11-10-2018 VSVS12_00507 a817e2e12e44c921f1c51971a977edd8 475 Gene3D G3DSA:2.40.30.10 331 433 1.1E-27 T 11-10-2018 VSVS12_00507 a817e2e12e44c921f1c51971a977edd8 475 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 18 474 53.475 T 11-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 VSVS12_00507 a817e2e12e44c921f1c51971a977edd8 475 SUPERFAMILY SSF50447 243 324 4.16E-24 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VSVS12_00507 a817e2e12e44c921f1c51971a977edd8 475 Gene3D G3DSA:2.40.30.10 242 327 1.2E-26 T 11-10-2018 VSVS12_00507 a817e2e12e44c921f1c51971a977edd8 475 Pfam PF00009 Elongation factor Tu GTP binding domain 26 226 2.9E-44 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_00507 a817e2e12e44c921f1c51971a977edd8 475 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 82 97 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site VSVS12_00507 a817e2e12e44c921f1c51971a977edd8 475 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 33 212 2.4E-13 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VSVS12_00507 a817e2e12e44c921f1c51971a977edd8 475 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 27 433 1.4E-195 T 11-10-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 VSVS12_00507 a817e2e12e44c921f1c51971a977edd8 475 PRINTS PR00315 GTP-binding elongation factor signature 125 136 1.1E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_00507 a817e2e12e44c921f1c51971a977edd8 475 PRINTS PR00315 GTP-binding elongation factor signature 162 171 1.1E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_00507 a817e2e12e44c921f1c51971a977edd8 475 PRINTS PR00315 GTP-binding elongation factor signature 89 97 1.1E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_00507 a817e2e12e44c921f1c51971a977edd8 475 PRINTS PR00315 GTP-binding elongation factor signature 28 41 1.1E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_00507 a817e2e12e44c921f1c51971a977edd8 475 PRINTS PR00315 GTP-binding elongation factor signature 109 119 1.1E-12 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_00507 a817e2e12e44c921f1c51971a977edd8 475 SUPERFAMILY SSF52540 19 236 7.25E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00507 a817e2e12e44c921f1c51971a977edd8 475 SUPERFAMILY SSF50465 332 434 1.44E-28 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VSVS12_03936 20d6ac37f6fc638f674985a4ab8a2aab 829 Pfam PF00384 Molybdopterin oxidoreductase 98 570 8.4E-92 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VSVS12_03936 20d6ac37f6fc638f674985a4ab8a2aab 829 Hamap MF_01630 Periplasmic nitrate reductase [napA]. 1 828 32.499 T 11-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 VSVS12_03936 20d6ac37f6fc638f674985a4ab8a2aab 829 SUPERFAMILY SSF53706 38 701 9.42E-199 T 11-10-2018 VSVS12_03936 20d6ac37f6fc638f674985a4ab8a2aab 829 Gene3D G3DSA:3.40.228.10 177 702 0.0 T 11-10-2018 VSVS12_03936 20d6ac37f6fc638f674985a4ab8a2aab 829 Gene3D G3DSA:2.40.40.20 705 828 5.9E-45 T 11-10-2018 VSVS12_03936 20d6ac37f6fc638f674985a4ab8a2aab 829 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 2 828 0.0 T 11-10-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042597|GO:0055114 KEGG: 00910+1.9.6.1|MetaCyc: PWY-5674 VSVS12_03936 20d6ac37f6fc638f674985a4ab8a2aab 829 Gene3D G3DSA:3.30.200.210 41 666 0.0 T 11-10-2018 VSVS12_03936 20d6ac37f6fc638f674985a4ab8a2aab 829 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 42 94 3.2E-16 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VSVS12_03936 20d6ac37f6fc638f674985a4ab8a2aab 829 SMART SM00926 41 95 4.3E-13 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VSVS12_03936 20d6ac37f6fc638f674985a4ab8a2aab 829 Gene3D G3DSA:3.40.50.740 98 623 0.0 T 11-10-2018 VSVS12_03936 20d6ac37f6fc638f674985a4ab8a2aab 829 SUPERFAMILY SSF50692 688 828 1.36E-42 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily VSVS12_03936 20d6ac37f6fc638f674985a4ab8a2aab 829 Pfam PF01568 Molydopterin dinucleotide binding domain 714 822 5.8E-26 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VSVS12_02050 7908bd2f1783fe247d61fb5a69473b51 547 Gene3D G3DSA:3.40.190.10 225 534 4.0E-139 T 11-10-2018 VSVS12_02050 7908bd2f1783fe247d61fb5a69473b51 547 SUPERFAMILY SSF53850 42 542 4.16E-126 T 11-10-2018 VSVS12_02050 7908bd2f1783fe247d61fb5a69473b51 547 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 85 463 4.4E-81 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain VSVS12_02050 7908bd2f1783fe247d61fb5a69473b51 547 Gene3D G3DSA:3.90.76.10 52 224 4.0E-139 T 11-10-2018 VSVS12_02050 7908bd2f1783fe247d61fb5a69473b51 547 Gene3D G3DSA:3.10.105.10 304 522 4.0E-139 T 11-10-2018 VSVS12_02050 7908bd2f1783fe247d61fb5a69473b51 547 PIRSF PIRSF002741 3 547 6.5E-91 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VSVS12_02323 57bfc1b1327feaec9691ab4fac97a82c 195 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 152 187 3.2E-5 T 11-10-2018 IPR010177 Doubled CXXCH motif VSVS12_02323 57bfc1b1327feaec9691ab4fac97a82c 195 TIGRFAM TIGR03146 cyt_nit_nrfB: cytochrome c nitrite reductase, pentaheme subunit 42 188 1.0E-63 T 11-10-2018 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit GO:0006807|GO:0020037|GO:0042597 VSVS12_02323 57bfc1b1327feaec9691ab4fac97a82c 195 SUPERFAMILY SSF48695 5 189 2.88E-26 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily VSVS12_02323 57bfc1b1327feaec9691ab4fac97a82c 195 Gene3D G3DSA:1.10.1130.10 105 193 2.8E-6 T 11-10-2018 VSVS12_02323 57bfc1b1327feaec9691ab4fac97a82c 195 Pfam PF13435 Cytochrome c554 and c-prime 44 89 0.0013 T 11-10-2018 IPR023155 Cytochrome c-552/4 VSVS12_00189 60753dcfefdfc363561e521164bfe627 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 3.0E-28 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VSVS12_00189 60753dcfefdfc363561e521164bfe627 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 3.0E-28 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VSVS12_00189 60753dcfefdfc363561e521164bfe627 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 3.0E-28 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VSVS12_00189 60753dcfefdfc363561e521164bfe627 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 3.0E-28 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VSVS12_00189 60753dcfefdfc363561e521164bfe627 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 3.0E-28 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VSVS12_00189 60753dcfefdfc363561e521164bfe627 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.787 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VSVS12_00189 60753dcfefdfc363561e521164bfe627 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 11-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VSVS12_00189 60753dcfefdfc363561e521164bfe627 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 175 1.1E-52 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VSVS12_00189 60753dcfefdfc363561e521164bfe627 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 2.5E-62 T 11-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VSVS12_00189 60753dcfefdfc363561e521164bfe627 177 SUPERFAMILY SSF47928 3 105 1.83E-28 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VSVS12_00189 60753dcfefdfc363561e521164bfe627 177 Gene3D G3DSA:1.10.520.20 2 106 8.9E-39 T 11-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VSVS12_04226 a02e09914d66ed6aa0eaccd17b6a69fb 294 Gene3D G3DSA:1.10.287.70 1 77 6.9E-16 T 11-10-2018 VSVS12_04226 a02e09914d66ed6aa0eaccd17b6a69fb 294 Pfam PF00510 Cytochrome c oxidase subunit III 7 118 5.4E-11 T 11-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_04226 a02e09914d66ed6aa0eaccd17b6a69fb 294 Pfam PF00510 Cytochrome c oxidase subunit III 154 293 3.9E-37 T 11-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_04226 a02e09914d66ed6aa0eaccd17b6a69fb 294 SUPERFAMILY SSF81452 4 294 8.69E-77 T 11-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_04226 a02e09914d66ed6aa0eaccd17b6a69fb 294 Gene3D G3DSA:1.20.120.80 79 294 1.3E-60 T 11-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_00843 ae8864c0c83bda3155345634d4db3dc6 301 Gene3D G3DSA:3.30.1490.20 115 181 3.4E-26 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VSVS12_00843 ae8864c0c83bda3155345634d4db3dc6 301 Gene3D G3DSA:3.30.470.80 182 299 3.3E-43 T 11-10-2018 VSVS12_00843 ae8864c0c83bda3155345634d4db3dc6 301 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 53.39 T 11-10-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK VSVS12_00843 ae8864c0c83bda3155345634d4db3dc6 301 Pfam PF08443 RimK-like ATP-grasp domain 98 286 7.8E-68 T 11-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 VSVS12_00843 ae8864c0c83bda3155345634d4db3dc6 301 SUPERFAMILY SSF56059 98 288 1.47E-49 T 11-10-2018 VSVS12_00843 ae8864c0c83bda3155345634d4db3dc6 301 Gene3D G3DSA:3.40.50.20 1 114 4.2E-39 T 11-10-2018 VSVS12_00843 ae8864c0c83bda3155345634d4db3dc6 301 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 286 1.9E-86 T 11-10-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 VSVS12_01414 6e5d13c0027bc0e95439ba3c9468a250 332 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 3 331 39.592 T 11-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 VSVS12_01414 6e5d13c0027bc0e95439ba3c9468a250 332 SUPERFAMILY SSF52418 70 328 1.31E-93 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VSVS12_01414 6e5d13c0027bc0e95439ba3c9468a250 332 SUPERFAMILY SSF47648 1 67 1.05E-17 T 11-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VSVS12_01414 6e5d13c0027bc0e95439ba3c9468a250 332 Pfam PF00591 Glycosyl transferase family, a/b domain 72 322 7.6E-104 T 11-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VSVS12_01414 6e5d13c0027bc0e95439ba3c9468a250 332 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 5 329 2.1E-127 T 11-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 VSVS12_01414 6e5d13c0027bc0e95439ba3c9468a250 332 Gene3D G3DSA:1.20.970.10 10 183 8.2E-122 T 11-10-2018 VSVS12_01414 6e5d13c0027bc0e95439ba3c9468a250 332 Gene3D G3DSA:3.40.1030.10 67 321 8.2E-122 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VSVS12_01414 6e5d13c0027bc0e95439ba3c9468a250 332 Pfam PF02885 Glycosyl transferase family, helical bundle domain 3 63 1.9E-16 T 11-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 VSVS12_00257 6c9de34051e08985c36d12cfa9df909e 192 SUPERFAMILY SSF57783 71 112 6.63E-14 T 11-10-2018 VSVS12_00257 6c9de34051e08985c36d12cfa9df909e 192 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 20 62 4.9E-10 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VSVS12_00257 6c9de34051e08985c36d12cfa9df909e 192 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 118 155 9.8E-15 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VSVS12_00257 6c9de34051e08985c36d12cfa9df909e 192 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 72 108 1.8E-16 T 11-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 VSVS12_00257 6c9de34051e08985c36d12cfa9df909e 192 Gene3D G3DSA:3.30.65.10 63 117 1.4E-9 T 11-10-2018 VSVS12_00257 6c9de34051e08985c36d12cfa9df909e 192 SUPERFAMILY SSF57783 17 69 5.95E-11 T 11-10-2018 VSVS12_01557 c8bee362eb8e693770a671b0ff16a4bb 129 Pfam PF12614 Ribosome recycling factor 4 127 3.2E-41 T 11-10-2018 IPR022253 Ribosome recycling factor. bacterial VSVS12_00877 7332bb4252b5122072661134c64886b9 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 3.1E-97 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 VSVS12_00877 7332bb4252b5122072661134c64886b9 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 4.7E-7 T 11-10-2018 IPR001451 Hexapeptide repeat VSVS12_00877 7332bb4252b5122072661134c64886b9 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 2 33 2.8E-7 T 11-10-2018 IPR001451 Hexapeptide repeat VSVS12_00877 7332bb4252b5122072661134c64886b9 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 144 176 0.0024 T 11-10-2018 IPR001451 Hexapeptide repeat VSVS12_00877 7332bb4252b5122072661134c64886b9 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 35 69 2.0E-4 T 11-10-2018 IPR001451 Hexapeptide repeat VSVS12_00877 7332bb4252b5122072661134c64886b9 262 SUPERFAMILY SSF51161 1 262 7.17E-75 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily VSVS12_00877 7332bb4252b5122072661134c64886b9 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 42.873 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 VSVS12_00877 7332bb4252b5122072661134c64886b9 262 Gene3D G3DSA:1.20.1180.10 197 262 2.1E-21 T 11-10-2018 IPR037157 UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamily KEGG: 00540+2.3.1.129 VSVS12_00877 7332bb4252b5122072661134c64886b9 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 2.0E-25 T 11-10-2018 IPR029098 UDP N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00540+2.3.1.129 VSVS12_00877 7332bb4252b5122072661134c64886b9 262 PIRSF PIRSF000456 4 262 1.7E-97 T 11-10-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00540+2.3.1.129 VSVS12_00877 7332bb4252b5122072661134c64886b9 262 Gene3D G3DSA:2.160.10.10 1 196 6.8E-51 T 11-10-2018 VSVS12_00296 d1d093ae92de964b25c6f5eb01063fd4 337 PIRSF PIRSF002786 1 328 5.4E-66 T 11-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 VSVS12_00296 d1d093ae92de964b25c6f5eb01063fd4 337 Gene3D G3DSA:1.10.40.60 216 285 4.6E-86 T 11-10-2018 IPR038072 GspK, central domain superfamily VSVS12_00296 d1d093ae92de964b25c6f5eb01063fd4 337 SUPERFAMILY SSF54523 36 325 1.49E-34 T 11-10-2018 VSVS12_00296 d1d093ae92de964b25c6f5eb01063fd4 337 SUPERFAMILY SSF158544 101 212 8.89E-27 T 11-10-2018 IPR038072 GspK, central domain superfamily VSVS12_00296 d1d093ae92de964b25c6f5eb01063fd4 337 Gene3D G3DSA:3.30.1300.30 42 309 4.6E-86 T 11-10-2018 VSVS12_00296 d1d093ae92de964b25c6f5eb01063fd4 337 Gene3D G3DSA:1.10.40.60 99 215 4.6E-86 T 11-10-2018 IPR038072 GspK, central domain superfamily VSVS12_00296 d1d093ae92de964b25c6f5eb01063fd4 337 SUPERFAMILY SSF158544 216 284 1.15E-18 T 11-10-2018 IPR038072 GspK, central domain superfamily VSVS12_00296 d1d093ae92de964b25c6f5eb01063fd4 337 Pfam PF03934 Type II secretion system (T2SS), protein K 33 317 5.6E-81 T 11-10-2018 IPR005628 General secretion pathway protein K GO:0009306|GO:0016021 VSVS12_02211 46dd2f202ed4047067c439bf9c1bb325 293 Gene3D G3DSA:2.70.98.10 1 293 3.1E-83 T 11-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 VSVS12_02211 46dd2f202ed4047067c439bf9c1bb325 293 Pfam PF01263 Aldose 1-epimerase 30 291 4.4E-49 T 11-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 VSVS12_02211 46dd2f202ed4047067c439bf9c1bb325 293 SUPERFAMILY SSF74650 6 290 4.46E-70 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VSVS12_02211 46dd2f202ed4047067c439bf9c1bb325 293 PIRSF PIRSF016020 5 293 7.2E-63 T 11-10-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 VSVS12_03425 62111b7c8e13cb9da02f2dbcc5f35360 443 SUPERFAMILY SSF103473 11 427 1.7E-37 T 11-10-2018 IPR036259 MFS transporter superfamily VSVS12_03425 62111b7c8e13cb9da02f2dbcc5f35360 443 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 59 84 - T 11-10-2018 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 VSVS12_03425 62111b7c8e13cb9da02f2dbcc5f35360 443 Gene3D G3DSA:1.20.1250.20 11 424 3.1E-29 T 11-10-2018 VSVS12_03425 62111b7c8e13cb9da02f2dbcc5f35360 443 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 8 441 8.9E-119 T 11-10-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 VSVS12_03425 62111b7c8e13cb9da02f2dbcc5f35360 443 Pfam PF13347 MFS/sugar transport protein 10 430 5.7E-101 T 11-10-2018 VSVS12_03748 695a2ccee9b60d41d4b5756d82ad1e33 439 Pfam PF03109 ABC1 family 115 230 8.3E-29 T 11-10-2018 IPR004147 UbiB domain VSVS12_03748 695a2ccee9b60d41d4b5756d82ad1e33 439 SUPERFAMILY SSF56112 98 321 5.31E-15 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily VSVS12_02975 b8ecd6b0bdf0226445ca1074467a10fc 396 SUPERFAMILY SSF103473 9 373 1.31E-35 T 11-10-2018 IPR036259 MFS transporter superfamily VSVS12_02975 b8ecd6b0bdf0226445ca1074467a10fc 396 PIRSF PIRSF004925 3 389 1.2E-103 T 11-10-2018 IPR026032 Probable 3-phenylpropionic acid transporter VSVS12_02975 b8ecd6b0bdf0226445ca1074467a10fc 396 Pfam PF12832 MFS_1 like family 13 361 5.1E-40 T 11-10-2018 IPR024989 Major facilitator superfamily associated domain VSVS12_02975 b8ecd6b0bdf0226445ca1074467a10fc 396 Gene3D G3DSA:1.20.1250.20 195 384 7.3E-32 T 11-10-2018 VSVS12_02975 b8ecd6b0bdf0226445ca1074467a10fc 396 Gene3D G3DSA:1.20.1250.20 5 187 2.2E-17 T 11-10-2018 VSVS12_00356 ba07163eeedb3b522388f9d0ea791e56 439 PIRSF PIRSF000850 1 439 1.5E-214 T 11-10-2018 VSVS12_00356 ba07163eeedb3b522388f9d0ea791e56 439 SMART SM00155 119 145 0.0066 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 VSVS12_00356 ba07163eeedb3b522388f9d0ea791e56 439 SMART SM00155 340 367 0.026 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 VSVS12_00356 ba07163eeedb3b522388f9d0ea791e56 439 Pfam PF13091 PLD-like domain 245 395 3.1E-23 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VSVS12_00356 ba07163eeedb3b522388f9d0ea791e56 439 Pfam PF13091 PLD-like domain 27 140 4.3E-8 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VSVS12_00356 ba07163eeedb3b522388f9d0ea791e56 439 Gene3D G3DSA:3.30.870.10 11 218 4.8E-165 T 11-10-2018 VSVS12_00356 ba07163eeedb3b522388f9d0ea791e56 439 SUPERFAMILY SSF56024 241 413 6.28E-25 T 11-10-2018 VSVS12_00356 ba07163eeedb3b522388f9d0ea791e56 439 SUPERFAMILY SSF56024 10 174 1.67E-26 T 11-10-2018 VSVS12_00356 ba07163eeedb3b522388f9d0ea791e56 439 Gene3D G3DSA:3.30.870.10 5 435 4.8E-165 T 11-10-2018 VSVS12_03972 ae1afe086a5db16bd21137d2608016cf 726 Gene3D G3DSA:1.10.420.10 581 702 9.6E-137 T 11-10-2018 VSVS12_03972 ae1afe086a5db16bd21137d2608016cf 726 SUPERFAMILY SSF48113 17 429 6.19E-150 T 11-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 VSVS12_03972 ae1afe086a5db16bd21137d2608016cf 726 Gene3D G3DSA:1.10.520.10 431 726 9.6E-137 T 11-10-2018 VSVS12_03972 ae1afe086a5db16bd21137d2608016cf 726 PRINTS PR00458 Haem peroxidase superfamily signature 148 165 2.3E-18 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VSVS12_03972 ae1afe086a5db16bd21137d2608016cf 726 PRINTS PR00458 Haem peroxidase superfamily signature 316 331 2.3E-18 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VSVS12_03972 ae1afe086a5db16bd21137d2608016cf 726 PRINTS PR00458 Haem peroxidase superfamily signature 88 102 2.3E-18 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VSVS12_03972 ae1afe086a5db16bd21137d2608016cf 726 PRINTS PR00458 Haem peroxidase superfamily signature 166 178 2.3E-18 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VSVS12_03972 ae1afe086a5db16bd21137d2608016cf 726 PRINTS PR00458 Haem peroxidase superfamily signature 257 272 2.3E-18 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VSVS12_03972 ae1afe086a5db16bd21137d2608016cf 726 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 9 726 0.0 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 VSVS12_03972 ae1afe086a5db16bd21137d2608016cf 726 SUPERFAMILY SSF48113 435 726 4.57E-102 T 11-10-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 VSVS12_03972 ae1afe086a5db16bd21137d2608016cf 726 Hamap MF_01961 Catalase-peroxidase [katG]. 5 726 39.121 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 VSVS12_03972 ae1afe086a5db16bd21137d2608016cf 726 ProSitePatterns PS00436 Peroxidases active site signature. 88 99 - T 11-10-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 VSVS12_03972 ae1afe086a5db16bd21137d2608016cf 726 Gene3D G3DSA:1.10.420.20 189 395 2.1E-213 T 11-10-2018 VSVS12_03972 ae1afe086a5db16bd21137d2608016cf 726 Gene3D G3DSA:1.10.520.10 26 429 2.1E-213 T 11-10-2018 VSVS12_03972 ae1afe086a5db16bd21137d2608016cf 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 65 90 2.0E-50 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 VSVS12_03972 ae1afe086a5db16bd21137d2608016cf 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 24 46 2.0E-50 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 VSVS12_03972 ae1afe086a5db16bd21137d2608016cf 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 479 505 2.0E-50 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 VSVS12_03972 ae1afe086a5db16bd21137d2608016cf 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 50 63 2.0E-50 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 VSVS12_03972 ae1afe086a5db16bd21137d2608016cf 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 265 288 2.0E-50 T 11-10-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|KEGG: 00983+1.11.1.21|MetaCyc: PWY-5506 VSVS12_03972 ae1afe086a5db16bd21137d2608016cf 726 Pfam PF00141 Peroxidase 403 701 5.2E-33 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VSVS12_03972 ae1afe086a5db16bd21137d2608016cf 726 Pfam PF00141 Peroxidase 77 395 9.9E-51 T 11-10-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 VSVS12_02235 9f8283e41dc62e2667177d3de81cd466 438 Gene3D G3DSA:2.40.160.60 26 438 1.0E-123 T 11-10-2018 VSVS12_02235 9f8283e41dc62e2667177d3de81cd466 438 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 17 438 1.1E-130 T 11-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VSVS12_02235 9f8283e41dc62e2667177d3de81cd466 438 SUPERFAMILY SSF56935 26 438 9.16E-99 T 11-10-2018 VSVS12_00224 036d689ec7b56152472970ca3a17eeb5 548 SUPERFAMILY SSF52518 1 177 6.79E-62 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold VSVS12_00224 036d689ec7b56152472970ca3a17eeb5 548 Gene3D G3DSA:3.40.50.1220 180 350 1.5E-50 T 11-10-2018 VSVS12_00224 036d689ec7b56152472970ca3a17eeb5 548 SUPERFAMILY SSF52518 358 546 4.79E-65 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold VSVS12_00224 036d689ec7b56152472970ca3a17eeb5 548 Gene3D G3DSA:3.40.50.970 351 548 6.9E-66 T 11-10-2018 VSVS12_00224 036d689ec7b56152472970ca3a17eeb5 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 412 431 - T 11-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 VSVS12_00224 036d689ec7b56152472970ca3a17eeb5 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 546 1.1E-210 T 11-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 VSVS12_00224 036d689ec7b56152472970ca3a17eeb5 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 167 4.0E-55 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VSVS12_00224 036d689ec7b56152472970ca3a17eeb5 548 Gene3D G3DSA:3.40.50.970 1 177 9.6E-67 T 11-10-2018 VSVS12_00224 036d689ec7b56152472970ca3a17eeb5 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 375 523 3.4E-48 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VSVS12_00224 036d689ec7b56152472970ca3a17eeb5 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 188 320 9.9E-40 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 VSVS12_00224 036d689ec7b56152472970ca3a17eeb5 548 SUPERFAMILY SSF52467 183 341 3.6E-55 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VSVS12_02448 8fa88035248ae6d16c7d4833af189d82 204 Pfam PF09976 Tetratricopeptide repeat-like domain 15 204 1.8E-57 T 11-10-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 VSVS12_02448 8fa88035248ae6d16c7d4833af189d82 204 SUPERFAMILY SSF48452 90 188 9.29E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_02448 8fa88035248ae6d16c7d4833af189d82 204 PIRSF PIRSF006170 1 204 1.5E-54 T 11-10-2018 IPR026039 Uncharacterised protein family UPF0070 VSVS12_02448 8fa88035248ae6d16c7d4833af189d82 204 Gene3D G3DSA:1.25.40.10 26 202 7.4E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_01290 1032293e8fa4674f0c3d972b9c32bffe 488 Pfam PF00367 phosphotransferase system, EIIB 415 446 3.0E-14 T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VSVS12_01290 1032293e8fa4674f0c3d972b9c32bffe 488 SUPERFAMILY SSF55604 411 485 2.88E-19 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VSVS12_01290 1032293e8fa4674f0c3d972b9c32bffe 488 Gene3D G3DSA:3.30.1360.60 407 488 1.3E-24 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VSVS12_01290 1032293e8fa4674f0c3d972b9c32bffe 488 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 424 441 - T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VSVS12_01290 1032293e8fa4674f0c3d972b9c32bffe 488 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 483 3.5E-189 T 11-10-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 VSVS12_01290 1032293e8fa4674f0c3d972b9c32bffe 488 Pfam PF02378 Phosphotransferase system, EIIC 11 324 2.1E-70 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VSVS12_01290 1032293e8fa4674f0c3d972b9c32bffe 488 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 384 471 1.7E-21 T 11-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VSVS12_00606 d5536902e66d792e745ff9beae0c9247 347 SUPERFAMILY SSF53067 9 152 5.75E-38 T 11-10-2018 VSVS12_00606 d5536902e66d792e745ff9beae0c9247 347 Pfam PF06723 MreB/Mbl protein 11 338 1.3E-148 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VSVS12_00606 d5536902e66d792e745ff9beae0c9247 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 7.7E-165 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VSVS12_00606 d5536902e66d792e745ff9beae0c9247 347 Gene3D G3DSA:3.90.640.10 190 263 2.3E-131 T 11-10-2018 VSVS12_00606 d5536902e66d792e745ff9beae0c9247 347 Gene3D G3DSA:3.30.420.40 14 331 2.3E-131 T 11-10-2018 VSVS12_00606 d5536902e66d792e745ff9beae0c9247 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 1.6E-63 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VSVS12_00606 d5536902e66d792e745ff9beae0c9247 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 1.6E-63 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VSVS12_00606 d5536902e66d792e745ff9beae0c9247 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 1.6E-63 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VSVS12_00606 d5536902e66d792e745ff9beae0c9247 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 1.6E-63 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VSVS12_00606 d5536902e66d792e745ff9beae0c9247 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 1.6E-63 T 11-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 VSVS12_00606 d5536902e66d792e745ff9beae0c9247 347 Gene3D G3DSA:3.30.420.40 158 321 2.3E-131 T 11-10-2018 VSVS12_00606 d5536902e66d792e745ff9beae0c9247 347 SUPERFAMILY SSF53067 154 340 2.57E-51 T 11-10-2018 VSVS12_02136 dd3658ed142c84f2b13cd5106adf38ee 194 SUPERFAMILY SSF101327 5 184 2.35E-32 T 11-10-2018 IPR036255 YgfB-like superfamily VSVS12_02136 dd3658ed142c84f2b13cd5106adf38ee 194 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 6 175 8.0E-43 T 11-10-2018 IPR011978 Uncharacterised protein family UPF0149 VSVS12_02136 dd3658ed142c84f2b13cd5106adf38ee 194 Pfam PF03695 Uncharacterised protein family (UPF0149) 7 179 6.3E-35 T 11-10-2018 IPR011978 Uncharacterised protein family UPF0149 VSVS12_02426 42a5ea51db29ebd05feb075cc45342e2 286 Gene3D G3DSA:3.30.40.60 167 273 1.7E-7 T 11-10-2018 VSVS12_02426 42a5ea51db29ebd05feb075cc45342e2 286 Pfam PF01844 HNH endonuclease 207 256 1.2E-8 T 11-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 VSVS12_02426 42a5ea51db29ebd05feb075cc45342e2 286 SMART SM00507 194 253 0.004 T 11-10-2018 IPR003615 HNH nuclease VSVS12_03631 ece581d5049f939bd5e78e4f2ad92f59 314 SUPERFAMILY SSF52540 12 186 3.63E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03631 ece581d5049f939bd5e78e4f2ad92f59 314 Pfam PF01926 50S ribosome-binding GTPase 120 185 1.1E-14 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 VSVS12_03631 ece581d5049f939bd5e78e4f2ad92f59 314 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 6 275 1.0E-107 T 11-10-2018 IPR019991 GTP-binding protein, ribosome biogenesis VSVS12_03631 ece581d5049f939bd5e78e4f2ad92f59 314 Gene3D G3DSA:1.10.1580.10 177 268 6.2E-30 T 11-10-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily VSVS12_03631 ece581d5049f939bd5e78e4f2ad92f59 314 PIRSF PIRSF006230 2 280 9.0E-106 T 11-10-2018 IPR016478 GTPase, MTG1 VSVS12_03631 ece581d5049f939bd5e78e4f2ad92f59 314 PIRSF PIRSF006230 285 313 160.0 T 11-10-2018 IPR016478 GTPase, MTG1 VSVS12_03631 ece581d5049f939bd5e78e4f2ad92f59 314 Gene3D G3DSA:3.40.50.300 6 174 4.8E-44 T 11-10-2018 VSVS12_03795 edf7182734550732cdd469fef8fefadd 411 SMART SM00852 184 321 4.5E-42 T 11-10-2018 IPR001453 MoaB/Mog domain VSVS12_03795 edf7182734550732cdd469fef8fefadd 411 Gene3D G3DSA:3.90.105.10 31 178 5.7E-144 T 11-10-2018 VSVS12_03795 edf7182734550732cdd469fef8fefadd 411 Gene3D G3DSA:2.40.340.10 332 401 5.7E-144 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VSVS12_03795 edf7182734550732cdd469fef8fefadd 411 Gene3D G3DSA:3.40.980.10 179 331 5.7E-144 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily VSVS12_03795 edf7182734550732cdd469fef8fefadd 411 SUPERFAMILY SSF53218 181 327 1.28E-41 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily VSVS12_03795 edf7182734550732cdd469fef8fefadd 411 SUPERFAMILY SSF63867 331 410 1.07E-23 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VSVS12_03795 edf7182734550732cdd469fef8fefadd 411 Pfam PF03454 MoeA C-terminal region (domain IV) 336 406 2.7E-21 T 11-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VSVS12_03795 edf7182734550732cdd469fef8fefadd 411 SUPERFAMILY SSF63882 7 180 7.46E-56 T 11-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VSVS12_03795 edf7182734550732cdd469fef8fefadd 411 Gene3D G3DSA:2.170.190.11 53 145 5.7E-144 T 11-10-2018 VSVS12_03795 edf7182734550732cdd469fef8fefadd 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 180 317 3.7E-33 T 11-10-2018 IPR001453 MoaB/Mog domain VSVS12_03795 edf7182734550732cdd469fef8fefadd 411 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 257 290 - T 11-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 VSVS12_03795 edf7182734550732cdd469fef8fefadd 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 11 171 3.6E-46 T 11-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VSVS12_03795 edf7182734550732cdd469fef8fefadd 411 Pfam PF00994 Probable molybdopterin binding domain 186 320 1.1E-25 T 11-10-2018 IPR001453 MoaB/Mog domain VSVS12_02974 664dd7d3d9c8e3b21b5e201161d68248 1143 SMART SM00387 897 1006 1.2E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_02974 664dd7d3d9c8e3b21b5e201161d68248 1143 SUPERFAMILY SSF47384 772 854 2.35E-14 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VSVS12_02974 664dd7d3d9c8e3b21b5e201161d68248 1143 SMART SM00388 788 853 5.7E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_02974 664dd7d3d9c8e3b21b5e201161d68248 1143 Gene3D G3DSA:3.30.450.20 616 748 4.0E-10 T 11-10-2018 VSVS12_02974 664dd7d3d9c8e3b21b5e201161d68248 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 933 947 1.4E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_02974 664dd7d3d9c8e3b21b5e201161d68248 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 990 1003 1.4E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_02974 664dd7d3d9c8e3b21b5e201161d68248 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 951 961 1.4E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_02974 664dd7d3d9c8e3b21b5e201161d68248 1143 PRINTS PR00344 Bacterial sensor protein C-terminal signature 966 984 1.4E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_02974 664dd7d3d9c8e3b21b5e201161d68248 1143 SUPERFAMILY SSF55874 843 1004 1.06E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_02974 664dd7d3d9c8e3b21b5e201161d68248 1143 SUPERFAMILY SSF55785 626 741 2.93E-8 T 11-10-2018 IPR035965 PAS domain superfamily VSVS12_02974 664dd7d3d9c8e3b21b5e201161d68248 1143 Gene3D G3DSA:1.20.1730.10 33 509 2.4E-8 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily VSVS12_02974 664dd7d3d9c8e3b21b5e201161d68248 1143 Pfam PF12860 PAS fold 634 747 1.1E-41 T 11-10-2018 VSVS12_02974 664dd7d3d9c8e3b21b5e201161d68248 1143 Gene3D G3DSA:3.40.50.2300 1022 1143 3.0E-15 T 11-10-2018 VSVS12_02974 664dd7d3d9c8e3b21b5e201161d68248 1143 Gene3D G3DSA:3.30.565.10 858 1012 1.2E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_02974 664dd7d3d9c8e3b21b5e201161d68248 1143 SUPERFAMILY SSF52172 1025 1141 1.12E-17 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_02974 664dd7d3d9c8e3b21b5e201161d68248 1143 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 898 1004 7.6E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_02974 664dd7d3d9c8e3b21b5e201161d68248 1143 Pfam PF00512 His Kinase A (phospho-acceptor) domain 788 853 7.1E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_02974 664dd7d3d9c8e3b21b5e201161d68248 1143 Gene3D G3DSA:1.10.287.130 751 851 1.2E-14 T 11-10-2018 VSVS12_02974 664dd7d3d9c8e3b21b5e201161d68248 1143 Pfam PF00072 Response regulator receiver domain 1028 1139 8.0E-12 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_02974 664dd7d3d9c8e3b21b5e201161d68248 1143 SMART SM00448 1026 1139 5.9E-14 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_03106 b2d6f25e8821fb770e892fba45f0560c 497 SMART SM00382 281 476 0.028 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_03106 b2d6f25e8821fb770e892fba45f0560c 497 SMART SM00382 31 221 5.5E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_03106 b2d6f25e8821fb770e892fba45f0560c 497 Gene3D G3DSA:3.40.50.300 250 496 6.8E-46 T 11-10-2018 VSVS12_03106 b2d6f25e8821fb770e892fba45f0560c 497 ProSitePatterns PS00211 ABC transporters family signature. 400 414 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_03106 b2d6f25e8821fb770e892fba45f0560c 497 SUPERFAMILY SSF52540 5 233 6.18E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03106 b2d6f25e8821fb770e892fba45f0560c 497 Pfam PF00005 ABC transporter 22 173 3.8E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_03106 b2d6f25e8821fb770e892fba45f0560c 497 SUPERFAMILY SSF52540 247 483 3.28E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03106 b2d6f25e8821fb770e892fba45f0560c 497 Pfam PF00005 ABC transporter 273 427 5.6E-22 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_03106 b2d6f25e8821fb770e892fba45f0560c 497 Gene3D G3DSA:3.40.50.300 2 237 6.9E-58 T 11-10-2018 VSVS12_01075 96654cd5ac43fe7cbba53fd8ec1faa6c 213 Gene3D G3DSA:3.40.50.300 3 213 5.0E-59 T 11-10-2018 VSVS12_01075 96654cd5ac43fe7cbba53fd8ec1faa6c 213 PRINTS PR00988 Uridine kinase signature 178 191 5.8E-36 T 11-10-2018 VSVS12_01075 96654cd5ac43fe7cbba53fd8ec1faa6c 213 PRINTS PR00988 Uridine kinase signature 156 167 5.8E-36 T 11-10-2018 VSVS12_01075 96654cd5ac43fe7cbba53fd8ec1faa6c 213 PRINTS PR00988 Uridine kinase signature 142 152 5.8E-36 T 11-10-2018 VSVS12_01075 96654cd5ac43fe7cbba53fd8ec1faa6c 213 PRINTS PR00988 Uridine kinase signature 41 52 5.8E-36 T 11-10-2018 VSVS12_01075 96654cd5ac43fe7cbba53fd8ec1faa6c 213 PRINTS PR00988 Uridine kinase signature 7 24 5.8E-36 T 11-10-2018 VSVS12_01075 96654cd5ac43fe7cbba53fd8ec1faa6c 213 PRINTS PR00988 Uridine kinase signature 86 101 5.8E-36 T 11-10-2018 VSVS12_01075 96654cd5ac43fe7cbba53fd8ec1faa6c 213 TIGRFAM TIGR00235 udk: uridine kinase 3 211 9.9E-89 T 11-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 VSVS12_01075 96654cd5ac43fe7cbba53fd8ec1faa6c 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 9 198 6.3E-41 T 11-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 VSVS12_01075 96654cd5ac43fe7cbba53fd8ec1faa6c 213 Hamap MF_00551 Uridine kinase [udk]. 4 212 38.887 T 11-10-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 VSVS12_01075 96654cd5ac43fe7cbba53fd8ec1faa6c 213 SUPERFAMILY SSF52540 6 204 3.81E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02206 118be2d84bbca8dae9a782753411e654 135 SUPERFAMILY SSF54427 1 95 3.5E-27 T 11-10-2018 IPR032710 NTF2-like domain superfamily VSVS12_02206 118be2d84bbca8dae9a782753411e654 135 Pfam PF02810 SEC-C motif 118 135 3.6E-10 T 11-10-2018 IPR004027 SEC-C motif VSVS12_02206 118be2d84bbca8dae9a782753411e654 135 SUPERFAMILY SSF103642 115 135 2.45E-8 T 11-10-2018 VSVS12_02206 118be2d84bbca8dae9a782753411e654 135 Gene3D G3DSA:3.10.450.50 1 135 6.4E-42 T 11-10-2018 VSVS12_02307 1da880128871a7b6c500ecfb55d5a094 344 SUPERFAMILY SSF55785 13 80 6.07E-10 T 11-10-2018 IPR035965 PAS domain superfamily VSVS12_02307 1da880128871a7b6c500ecfb55d5a094 344 SMART SM00091 13 76 2.5E-5 T 11-10-2018 IPR000014 PAS domain VSVS12_02307 1da880128871a7b6c500ecfb55d5a094 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 263 277 2.0E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_02307 1da880128871a7b6c500ecfb55d5a094 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 316 329 2.0E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_02307 1da880128871a7b6c500ecfb55d5a094 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 281 291 2.0E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_02307 1da880128871a7b6c500ecfb55d5a094 344 PRINTS PR00344 Bacterial sensor protein C-terminal signature 292 310 2.0E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_02307 1da880128871a7b6c500ecfb55d5a094 344 Gene3D G3DSA:3.30.565.10 185 339 1.6E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_02307 1da880128871a7b6c500ecfb55d5a094 344 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 229 331 7.3E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_02307 1da880128871a7b6c500ecfb55d5a094 344 Gene3D G3DSA:3.30.450.20 6 103 1.4E-7 T 11-10-2018 VSVS12_02307 1da880128871a7b6c500ecfb55d5a094 344 SMART SM00387 226 332 4.6E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_02307 1da880128871a7b6c500ecfb55d5a094 344 SUPERFAMILY SSF55874 172 334 4.71E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_02307 1da880128871a7b6c500ecfb55d5a094 344 Pfam PF00512 His Kinase A (phospho-acceptor) domain 117 181 6.4E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_02307 1da880128871a7b6c500ecfb55d5a094 344 SUPERFAMILY SSF47384 112 183 4.12E-10 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VSVS12_02307 1da880128871a7b6c500ecfb55d5a094 344 Pfam PF13188 PAS domain 13 52 2.2E-7 T 11-10-2018 IPR000014 PAS domain VSVS12_02307 1da880128871a7b6c500ecfb55d5a094 344 SMART SM00388 117 183 2.1E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_02307 1da880128871a7b6c500ecfb55d5a094 344 Gene3D G3DSA:1.10.287.130 104 180 1.5E-9 T 11-10-2018 VSVS12_02234 8276c6ccf1236ca21ad5ec32595ebe47 432 Gene3D G3DSA:2.40.160.60 29 432 2.0E-104 T 11-10-2018 VSVS12_02234 8276c6ccf1236ca21ad5ec32595ebe47 432 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 21 432 7.5E-115 T 11-10-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) VSVS12_02234 8276c6ccf1236ca21ad5ec32595ebe47 432 SUPERFAMILY SSF56935 29 432 1.33E-81 T 11-10-2018 VSVS12_01491 aa3bb7db14b27594043b97edc24f48ae 1443 Pfam PF00384 Molybdopterin oxidoreductase 818 1244 1.2E-88 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VSVS12_01491 aa3bb7db14b27594043b97edc24f48ae 1443 Gene3D G3DSA:2.40.40.20 1317 1438 9.9E-41 T 11-10-2018 VSVS12_01491 aa3bb7db14b27594043b97edc24f48ae 1443 SUPERFAMILY SSF51971 206 446 2.0E-61 T 11-10-2018 VSVS12_01491 aa3bb7db14b27594043b97edc24f48ae 1443 SUPERFAMILY SSF54862 653 771 2.6E-9 T 11-10-2018 VSVS12_01491 aa3bb7db14b27594043b97edc24f48ae 1443 Pfam PF01568 Molydopterin dinucleotide binding domain 1327 1431 1.6E-29 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VSVS12_01491 aa3bb7db14b27594043b97edc24f48ae 1443 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 761 814 1.1E-15 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VSVS12_01491 aa3bb7db14b27594043b97edc24f48ae 1443 Gene3D G3DSA:1.10.1060.10 62 205 3.4E-25 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VSVS12_01491 aa3bb7db14b27594043b97edc24f48ae 1443 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 1190 1207 - T 11-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 VSVS12_01491 aa3bb7db14b27594043b97edc24f48ae 1443 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 208 504 4.4E-33 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VSVS12_01491 aa3bb7db14b27594043b97edc24f48ae 1443 SUPERFAMILY SSF46548 97 216 8.89E-17 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VSVS12_01491 aa3bb7db14b27594043b97edc24f48ae 1443 SMART SM00926 760 815 3.2E-17 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VSVS12_01491 aa3bb7db14b27594043b97edc24f48ae 1443 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 765 782 - T 11-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 VSVS12_01491 aa3bb7db14b27594043b97edc24f48ae 1443 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 112 191 3.1E-18 T 11-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 VSVS12_01491 aa3bb7db14b27594043b97edc24f48ae 1443 Pfam PF00037 4Fe-4S binding domain 729 746 2.5E-5 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VSVS12_01491 aa3bb7db14b27594043b97edc24f48ae 1443 Gene3D G3DSA:2.20.25.90 760 815 2.1E-19 T 11-10-2018 VSVS12_01491 aa3bb7db14b27594043b97edc24f48ae 1443 Gene3D G3DSA:3.40.50.740 823 1285 4.5E-178 T 11-10-2018 VSVS12_01491 aa3bb7db14b27594043b97edc24f48ae 1443 SUPERFAMILY SSF53706 758 1289 2.09E-203 T 11-10-2018 VSVS12_01491 aa3bb7db14b27594043b97edc24f48ae 1443 Gene3D G3DSA:3.30.70.20 640 749 1.9E-13 T 11-10-2018 VSVS12_01491 aa3bb7db14b27594043b97edc24f48ae 1443 PRINTS PR00419 Adrenodoxin reductase family signature 231 244 3.7E-14 T 11-10-2018 VSVS12_01491 aa3bb7db14b27594043b97edc24f48ae 1443 PRINTS PR00419 Adrenodoxin reductase family signature 208 230 3.7E-14 T 11-10-2018 VSVS12_01491 aa3bb7db14b27594043b97edc24f48ae 1443 PRINTS PR00419 Adrenodoxin reductase family signature 339 353 3.7E-14 T 11-10-2018 VSVS12_01491 aa3bb7db14b27594043b97edc24f48ae 1443 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 731 742 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VSVS12_01491 aa3bb7db14b27594043b97edc24f48ae 1443 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 765 1435 6.4E-249 T 11-10-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.17.1.9|KEGG: 00680+1.17.1.9|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696|MetaCyc: PWY-7985 VSVS12_01491 aa3bb7db14b27594043b97edc24f48ae 1443 SUPERFAMILY SSF54292 1 114 1.35E-20 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VSVS12_01491 aa3bb7db14b27594043b97edc24f48ae 1443 SUPERFAMILY SSF50692 1283 1436 5.42E-40 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily VSVS12_01491 aa3bb7db14b27594043b97edc24f48ae 1443 Gene3D G3DSA:3.50.50.60 206 325 2.5E-34 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_01491 aa3bb7db14b27594043b97edc24f48ae 1443 Gene3D G3DSA:3.50.50.60 334 539 8.4E-27 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_01491 aa3bb7db14b27594043b97edc24f48ae 1443 SUPERFAMILY SSF46548 502 676 3.35E-16 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VSVS12_01491 aa3bb7db14b27594043b97edc24f48ae 1443 Gene3D G3DSA:3.40.228.10 896 1097 4.5E-178 T 11-10-2018 VSVS12_01491 aa3bb7db14b27594043b97edc24f48ae 1443 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 2 91 1.8E-6 T 11-10-2018 VSVS12_00915 386e6d9933b85448b8bf261ef4ee98af 627 Pfam PF03717 Penicillin-binding Protein dimerisation domain 65 240 2.0E-51 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 VSVS12_00915 386e6d9933b85448b8bf261ef4ee98af 627 Gene3D G3DSA:3.40.710.10 250 626 5.3E-93 T 11-10-2018 VSVS12_00915 386e6d9933b85448b8bf261ef4ee98af 627 Gene3D G3DSA:3.90.1310.10 65 249 1.8E-54 T 11-10-2018 VSVS12_00915 386e6d9933b85448b8bf261ef4ee98af 627 Gene3D G3DSA:3.30.1390.30 86 161 1.8E-54 T 11-10-2018 VSVS12_00915 386e6d9933b85448b8bf261ef4ee98af 627 SUPERFAMILY SSF56519 57 253 2.35E-56 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 VSVS12_00915 386e6d9933b85448b8bf261ef4ee98af 627 Pfam PF00905 Penicillin binding protein transpeptidase domain 272 616 2.2E-74 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VSVS12_00915 386e6d9933b85448b8bf261ef4ee98af 627 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 21 617 1.4E-240 T 11-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VSVS12_00915 386e6d9933b85448b8bf261ef4ee98af 627 Hamap MF_02081 Peptidoglycan D,D-transpeptidase MrdA [mrdA]. 4 623 53.343 T 11-10-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0009002|GO:0009252|GO:0016020 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VSVS12_00915 386e6d9933b85448b8bf261ef4ee98af 627 SUPERFAMILY SSF56601 255 618 3.27E-94 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VSVS12_00342 eec7290d2a3e91ea5ad54d67f7ce1be8 337 Pfam PF02719 Polysaccharide biosynthesis protein 7 281 1.0E-100 T 11-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain VSVS12_00342 eec7290d2a3e91ea5ad54d67f7ce1be8 337 Gene3D G3DSA:3.90.25.30 171 314 2.1E-127 T 11-10-2018 VSVS12_00342 eec7290d2a3e91ea5ad54d67f7ce1be8 337 SUPERFAMILY SSF51735 1 266 2.58E-52 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_00342 eec7290d2a3e91ea5ad54d67f7ce1be8 337 TIGRFAM TIGR03589 PseB: UDP-N-acetylglucosamine 4,6-dehydratase (inverting) 1 326 3.1E-165 T 11-10-2018 IPR020025 UDP-N-acetylglucosamine 4,6-dehydratase (inverting) KEGG: 00520+4.2.1.115|MetaCyc: PWY-6143|MetaCyc: PWY-7330|MetaCyc: PWY-7331|MetaCyc: PWY-7332|MetaCyc: PWY-7719 VSVS12_00342 eec7290d2a3e91ea5ad54d67f7ce1be8 337 Gene3D G3DSA:3.40.50.720 4 310 2.1E-127 T 11-10-2018 VSVS12_01726 356939e489ee94cf39b348094031933f 605 Gene3D G3DSA:2.20.25.120 53 85 2.0E-56 T 11-10-2018 VSVS12_01726 356939e489ee94cf39b348094031933f 605 SUPERFAMILY SSF52540 7 168 6.23E-26 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01726 356939e489ee94cf39b348094031933f 605 PIRSF PIRSF036618 1 605 0.0 T 11-10-2018 IPR012182 Bifunctional molybdenum cofactor biosynthesis MobB/MoeA VSVS12_01726 356939e489ee94cf39b348094031933f 605 SUPERFAMILY SSF63882 201 374 5.63E-49 T 11-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VSVS12_01726 356939e489ee94cf39b348094031933f 605 Gene3D G3DSA:3.40.50.300 10 165 2.0E-56 T 11-10-2018 VSVS12_01726 356939e489ee94cf39b348094031933f 605 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 376 512 6.0E-33 T 11-10-2018 IPR001453 MoaB/Mog domain VSVS12_01726 356939e489ee94cf39b348094031933f 605 Pfam PF03453 MoeA N-terminal region (domain I and II) 202 366 9.6E-42 T 11-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VSVS12_01726 356939e489ee94cf39b348094031933f 605 Pfam PF00994 Probable molybdopterin binding domain 381 516 2.2E-27 T 11-10-2018 IPR001453 MoaB/Mog domain VSVS12_01726 356939e489ee94cf39b348094031933f 605 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 9 142 6.2E-48 T 11-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 VSVS12_01726 356939e489ee94cf39b348094031933f 605 Gene3D G3DSA:3.40.980.10 374 525 9.2E-138 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily VSVS12_01726 356939e489ee94cf39b348094031933f 605 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 452 485 - T 11-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 VSVS12_01726 356939e489ee94cf39b348094031933f 605 SUPERFAMILY SSF63867 525 603 2.22E-22 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VSVS12_01726 356939e489ee94cf39b348094031933f 605 Pfam PF03454 MoeA C-terminal region (domain IV) 530 601 2.1E-20 T 11-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VSVS12_01726 356939e489ee94cf39b348094031933f 605 SUPERFAMILY SSF53218 376 522 9.82E-44 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily VSVS12_01726 356939e489ee94cf39b348094031933f 605 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 9 167 3.3E-44 T 11-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 VSVS12_01726 356939e489ee94cf39b348094031933f 605 SMART SM00852 379 516 2.0E-41 T 11-10-2018 IPR001453 MoaB/Mog domain VSVS12_01726 356939e489ee94cf39b348094031933f 605 Gene3D G3DSA:3.90.105.10 220 373 9.2E-138 T 11-10-2018 VSVS12_01726 356939e489ee94cf39b348094031933f 605 Gene3D G3DSA:2.170.190.11 244 340 9.2E-138 T 11-10-2018 VSVS12_01726 356939e489ee94cf39b348094031933f 605 Gene3D G3DSA:2.40.340.10 526 596 9.2E-138 T 11-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VSVS12_02171 178c13a06d51310cd866be9d7022ca8a 171 SUPERFAMILY SSF52833 41 163 3.86E-26 T 11-10-2018 IPR036249 Thioredoxin-like superfamily VSVS12_02171 178c13a06d51310cd866be9d7022ca8a 171 Gene3D G3DSA:3.40.30.10 29 161 3.3E-22 T 11-10-2018 VSVS12_02171 178c13a06d51310cd866be9d7022ca8a 171 ProSitePatterns PS00194 Thioredoxin family active site. 70 88 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VSVS12_02171 178c13a06d51310cd866be9d7022ca8a 171 PRINTS PR00421 Thioredoxin family signature 69 77 5.9E-5 T 11-10-2018 VSVS12_02171 178c13a06d51310cd866be9d7022ca8a 171 PRINTS PR00421 Thioredoxin family signature 77 86 5.9E-5 T 11-10-2018 VSVS12_02171 178c13a06d51310cd866be9d7022ca8a 171 PRINTS PR00421 Thioredoxin family signature 136 147 5.9E-5 T 11-10-2018 VSVS12_02171 178c13a06d51310cd866be9d7022ca8a 171 Pfam PF00578 AhpC/TSA family 43 153 4.1E-12 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VSVS12_03934 5df34fa12775209df6d4dd1aa721c891 161 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 9 154 3.9E-40 T 11-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 VSVS12_03934 5df34fa12775209df6d4dd1aa721c891 161 Hamap MF_02201 Ferredoxin-type protein NapF [napF]. 23 160 24.004 T 11-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 VSVS12_03934 5df34fa12775209df6d4dd1aa721c891 161 Gene3D G3DSA:3.30.70.20 30 82 1.0E-9 T 11-10-2018 VSVS12_03934 5df34fa12775209df6d4dd1aa721c891 161 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 139 150 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VSVS12_03934 5df34fa12775209df6d4dd1aa721c891 161 Gene3D G3DSA:3.30.70.20 96 158 1.9E-9 T 11-10-2018 VSVS12_03934 5df34fa12775209df6d4dd1aa721c891 161 Pfam PF12838 4Fe-4S dicluster domain 35 79 3.4E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VSVS12_03934 5df34fa12775209df6d4dd1aa721c891 161 Pfam PF12838 4Fe-4S dicluster domain 106 151 5.0E-9 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VSVS12_03934 5df34fa12775209df6d4dd1aa721c891 161 SUPERFAMILY SSF54862 31 156 8.79E-19 T 11-10-2018 VSVS12_01811 70ff36bc8874085f9a60acbdc5e87bac 131 Pfam PF03846 Cell division inhibitor SulA 19 97 2.1E-6 T 11-10-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 VSVS12_01811 70ff36bc8874085f9a60acbdc5e87bac 131 SUPERFAMILY SSF52540 21 102 9.03E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01811 70ff36bc8874085f9a60acbdc5e87bac 131 Gene3D G3DSA:3.40.50.300 16 124 1.6E-9 T 11-10-2018 VSVS12_04199 418d003f9374bdb85a03dea7eb8155ad 409 Gene3D G3DSA:1.10.150.130 102 215 1.1E-25 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal VSVS12_04199 418d003f9374bdb85a03dea7eb8155ad 409 Gene3D G3DSA:1.10.443.10 216 388 1.4E-16 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VSVS12_04199 418d003f9374bdb85a03dea7eb8155ad 409 Pfam PF00589 Phage integrase family 213 375 1.8E-20 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VSVS12_04199 418d003f9374bdb85a03dea7eb8155ad 409 SUPERFAMILY SSF56349 106 387 3.24E-52 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VSVS12_04199 418d003f9374bdb85a03dea7eb8155ad 409 Gene3D G3DSA:3.30.160.390 6 95 3.2E-25 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily VSVS12_04199 418d003f9374bdb85a03dea7eb8155ad 409 Pfam PF13356 Arm DNA-binding domain 8 94 3.8E-19 T 11-10-2018 IPR025166 Integrase, DNA-binding domain VSVS12_00971 f9ccd9f92d5e1da10f5edaead9b764a4 308 Pfam PF00072 Response regulator receiver domain 184 302 1.3E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_00971 f9ccd9f92d5e1da10f5edaead9b764a4 308 Gene3D G3DSA:2.40.50.180 39 153 5.2E-28 T 11-10-2018 VSVS12_00971 f9ccd9f92d5e1da10f5edaead9b764a4 308 Gene3D G3DSA:2.30.30.40 23 147 5.2E-28 T 11-10-2018 VSVS12_00971 f9ccd9f92d5e1da10f5edaead9b764a4 308 Gene3D G3DSA:3.40.50.2300 168 308 2.5E-26 T 11-10-2018 VSVS12_00971 f9ccd9f92d5e1da10f5edaead9b764a4 308 SMART SM00448 182 302 3.8E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_00971 f9ccd9f92d5e1da10f5edaead9b764a4 308 SUPERFAMILY SSF52172 183 306 1.99E-26 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_00971 f9ccd9f92d5e1da10f5edaead9b764a4 308 SUPERFAMILY SSF50341 16 157 6.8E-35 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VSVS12_00971 f9ccd9f92d5e1da10f5edaead9b764a4 308 SMART SM00260 17 153 1.1E-26 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VSVS12_00971 f9ccd9f92d5e1da10f5edaead9b764a4 308 Pfam PF01584 CheW-like domain 21 155 3.9E-34 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VSVS12_00971 f9ccd9f92d5e1da10f5edaead9b764a4 308 PIRSF PIRSF002867 1 308 4.9E-103 T 11-10-2018 IPR024181 Chemotaxis response regulator CheV VSVS12_00829 45a1f9053a5030716c8e401c254aa7de 413 Hamap MF_00426 Na(+)-translocating NADH-quinone reductase subunit B [nqrB]. 1 411 36.377 T 11-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 VSVS12_00829 45a1f9053a5030716c8e401c254aa7de 413 PIRSF PIRSF016055 1 413 4.2E-197 T 11-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 VSVS12_00829 45a1f9053a5030716c8e401c254aa7de 413 Pfam PF03116 NQR2, RnfD, RnfE family 40 404 7.7E-107 T 11-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 VSVS12_00829 45a1f9053a5030716c8e401c254aa7de 413 TIGRFAM TIGR01937 nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit 2 407 1.7E-201 T 11-10-2018 IPR010966 Na(+)-translocating NADH-quinone reductase subunit B GO:0010181|GO:0016021|GO:0016655|GO:0022904 VSVS12_03696 619c52df48d9a5ba716c2959f47986ff 444 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 443 2.4E-15 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_03696 619c52df48d9a5ba716c2959f47986ff 444 Gene3D G3DSA:3.30.450.170 26 145 6.4E-30 T 11-10-2018 IPR038428 2-component histidine kinase, sensor domain superfamily VSVS12_03696 619c52df48d9a5ba716c2959f47986ff 444 SUPERFAMILY SSF55874 281 443 1.96E-31 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_03696 619c52df48d9a5ba716c2959f47986ff 444 SUPERFAMILY SSF158472 173 227 1.31E-6 T 11-10-2018 VSVS12_03696 619c52df48d9a5ba716c2959f47986ff 444 SUPERFAMILY SSF47384 213 291 2.35E-10 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VSVS12_03696 619c52df48d9a5ba716c2959f47986ff 444 Gene3D G3DSA:1.10.287.130 177 289 1.4E-23 T 11-10-2018 VSVS12_03696 619c52df48d9a5ba716c2959f47986ff 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 443 1.9E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_03696 619c52df48d9a5ba716c2959f47986ff 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 386 1.9E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_03696 619c52df48d9a5ba716c2959f47986ff 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 400 1.9E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_03696 619c52df48d9a5ba716c2959f47986ff 444 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 424 1.9E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_03696 619c52df48d9a5ba716c2959f47986ff 444 SMART SM00387 335 444 7.9E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_03696 619c52df48d9a5ba716c2959f47986ff 444 SMART SM00388 229 291 1.7E-7 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_03696 619c52df48d9a5ba716c2959f47986ff 444 Pfam PF00672 HAMP domain 173 223 3.6E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_03696 619c52df48d9a5ba716c2959f47986ff 444 Pfam PF16750 Sensor domain of 2-component histidine kinase 37 144 1.2E-32 T 11-10-2018 IPR031930 2-component histidine kinase, sensor domain VSVS12_03696 619c52df48d9a5ba716c2959f47986ff 444 SMART SM00304 173 228 3.5E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_03696 619c52df48d9a5ba716c2959f47986ff 444 Gene3D G3DSA:3.30.565.10 290 444 1.9E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_03696 619c52df48d9a5ba716c2959f47986ff 444 Pfam PF00512 His Kinase A (phospho-acceptor) domain 231 290 1.3E-8 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_00671 5bb6a1759150e1a84abb315a5b82949e 176 Gene3D G3DSA:3.40.50.2020 1 176 1.5E-65 T 11-10-2018 VSVS12_00671 5bb6a1759150e1a84abb315a5b82949e 176 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 172 5.6E-74 T 11-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 VSVS12_00671 5bb6a1759150e1a84abb315a5b82949e 176 SUPERFAMILY SSF53271 3 175 5.38E-55 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like VSVS12_00671 5bb6a1759150e1a84abb315a5b82949e 176 Pfam PF00156 Phosphoribosyl transferase domain 12 159 5.0E-25 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 VSVS12_03956 0173390591f896f29ec792132658a806 886 SMART SM00267 448 613 1.8E-7 T 11-10-2018 IPR000160 GGDEF domain VSVS12_03956 0173390591f896f29ec792132658a806 886 SMART SM00052 626 876 5.5E-89 T 11-10-2018 IPR001633 EAL domain VSVS12_03956 0173390591f896f29ec792132658a806 886 Gene3D G3DSA:3.30.70.270 454 618 4.1E-18 T 11-10-2018 VSVS12_03956 0173390591f896f29ec792132658a806 886 SMART SM00091 338 403 1.1E-5 T 11-10-2018 IPR000014 PAS domain VSVS12_03956 0173390591f896f29ec792132658a806 886 SUPERFAMILY SSF55785 329 444 3.84E-12 T 11-10-2018 IPR035965 PAS domain superfamily VSVS12_03956 0173390591f896f29ec792132658a806 886 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 336 449 8.3E-11 T 11-10-2018 IPR000014 PAS domain VSVS12_03956 0173390591f896f29ec792132658a806 886 SUPERFAMILY SSF141868 632 882 8.11E-77 T 11-10-2018 IPR035919 EAL domain superfamily VSVS12_03956 0173390591f896f29ec792132658a806 886 Pfam PF00563 EAL domain 632 871 5.9E-64 T 11-10-2018 IPR001633 EAL domain VSVS12_03956 0173390591f896f29ec792132658a806 886 Pfam PF00990 Diguanylate cyclase, GGDEF domain 461 598 2.0E-11 T 11-10-2018 IPR000160 GGDEF domain VSVS12_03956 0173390591f896f29ec792132658a806 886 Pfam PF05228 CHASE4 domain 36 193 4.7E-27 T 11-10-2018 IPR007892 CHASE4 VSVS12_03956 0173390591f896f29ec792132658a806 886 SUPERFAMILY SSF55073 465 601 8.63E-14 T 11-10-2018 IPR029787 Nucleotide cyclase VSVS12_03956 0173390591f896f29ec792132658a806 886 Gene3D G3DSA:3.30.450.20 334 445 2.2E-13 T 11-10-2018 VSVS12_03956 0173390591f896f29ec792132658a806 886 Gene3D G3DSA:3.20.20.450 627 885 1.4E-81 T 11-10-2018 IPR035919 EAL domain superfamily VSVS12_03956 0173390591f896f29ec792132658a806 886 Pfam PF13426 PAS domain 350 444 7.6E-8 T 11-10-2018 IPR000014 PAS domain VSVS12_03576 3bca88bce5f7fc160123b9adacebfab8 537 SUPERFAMILY SSF52172 10 138 4.55E-20 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_03576 3bca88bce5f7fc160123b9adacebfab8 537 Pfam PF00072 Response regulator receiver domain 14 130 9.0E-15 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_03576 3bca88bce5f7fc160123b9adacebfab8 537 SMART SM00448 12 130 1.7E-13 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_03576 3bca88bce5f7fc160123b9adacebfab8 537 Gene3D G3DSA:3.40.50.2300 9 150 2.4E-19 T 11-10-2018 VSVS12_03576 3bca88bce5f7fc160123b9adacebfab8 537 SUPERFAMILY SSF48452 200 267 3.8E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_01634 642018ea57150116fc0725cfce27666c 546 SMART SM00304 215 269 1.1E-15 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_01634 642018ea57150116fc0725cfce27666c 546 Pfam PF00672 HAMP domain 215 265 4.7E-13 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_01634 642018ea57150116fc0725cfce27666c 546 SUPERFAMILY SSF58104 237 545 4.05E-77 T 11-10-2018 VSVS12_01634 642018ea57150116fc0725cfce27666c 546 Gene3D G3DSA:1.10.287.950 214 546 2.4E-74 T 11-10-2018 VSVS12_01634 642018ea57150116fc0725cfce27666c 546 SMART SM00283 284 545 1.8E-69 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_01634 642018ea57150116fc0725cfce27666c 546 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 329 511 1.4E-43 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_03723 ebfd13ad1ce4e84163a4dd0e523dc7dd 370 Pfam PF08402 TOBE domain 281 353 1.8E-9 T 11-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VSVS12_03723 ebfd13ad1ce4e84163a4dd0e523dc7dd 370 Gene3D G3DSA:2.40.50.100 239 361 1.3E-45 T 11-10-2018 VSVS12_03723 ebfd13ad1ce4e84163a4dd0e523dc7dd 370 SUPERFAMILY SSF52540 4 244 2.21E-84 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03723 ebfd13ad1ce4e84163a4dd0e523dc7dd 370 Gene3D G3DSA:2.40.50.140 287 344 1.3E-45 T 11-10-2018 VSVS12_03723 ebfd13ad1ce4e84163a4dd0e523dc7dd 370 Gene3D G3DSA:3.40.50.300 1 238 6.1E-73 T 11-10-2018 VSVS12_03723 ebfd13ad1ce4e84163a4dd0e523dc7dd 370 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_03723 ebfd13ad1ce4e84163a4dd0e523dc7dd 370 Pfam PF00005 ABC transporter 20 161 3.5E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_03723 ebfd13ad1ce4e84163a4dd0e523dc7dd 370 SUPERFAMILY SSF50331 236 362 1.31E-30 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VSVS12_03723 ebfd13ad1ce4e84163a4dd0e523dc7dd 370 SMART SM00382 28 211 1.4E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_04169 a5c830c7031fb680e501eaa6457a98d1 735 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 242 507 1.8E-31 T 11-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain VSVS12_04169 a5c830c7031fb680e501eaa6457a98d1 735 SUPERFAMILY SSF52317 14 239 2.03E-56 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like VSVS12_04169 a5c830c7031fb680e501eaa6457a98d1 735 Gene3D G3DSA:3.10.180.10 557 724 6.0E-21 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VSVS12_04169 a5c830c7031fb680e501eaa6457a98d1 735 SUPERFAMILY SSF54593 559 726 3.15E-18 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VSVS12_04169 a5c830c7031fb680e501eaa6457a98d1 735 Gene3D G3DSA:3.90.245.10 237 543 3.5E-45 T 11-10-2018 IPR036452 Ribonucleoside hydrolase-like VSVS12_04169 a5c830c7031fb680e501eaa6457a98d1 735 Gene3D G3DSA:3.40.50.880 13 236 1.9E-59 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like VSVS12_04169 a5c830c7031fb680e501eaa6457a98d1 735 SUPERFAMILY SSF53590 241 502 5.49E-40 T 11-10-2018 IPR036452 Ribonucleoside hydrolase-like VSVS12_04169 a5c830c7031fb680e501eaa6457a98d1 735 Pfam PF01965 DJ-1/PfpI family 39 235 1.1E-9 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 VSVS12_04169 a5c830c7031fb680e501eaa6457a98d1 735 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 565 722 2.4E-10 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VSVS12_00430 02536e72022905035f20766f37941777 495 SUPERFAMILY SSF55424 358 480 1.89E-25 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VSVS12_00430 02536e72022905035f20766f37941777 495 PIRSF PIRSF000350 1 478 6.2E-62 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 VSVS12_00430 02536e72022905035f20766f37941777 495 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 274 288 1.5E-42 T 11-10-2018 VSVS12_00430 02536e72022905035f20766f37941777 495 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 179 204 1.5E-42 T 11-10-2018 VSVS12_00430 02536e72022905035f20766f37941777 495 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 12 34 1.5E-42 T 11-10-2018 VSVS12_00430 02536e72022905035f20766f37941777 495 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 355 376 1.5E-42 T 11-10-2018 VSVS12_00430 02536e72022905035f20766f37941777 495 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 152 1.5E-42 T 11-10-2018 VSVS12_00430 02536e72022905035f20766f37941777 495 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 318 325 1.5E-42 T 11-10-2018 VSVS12_00430 02536e72022905035f20766f37941777 495 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 445 465 1.5E-42 T 11-10-2018 VSVS12_00430 02536e72022905035f20766f37941777 495 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 44 59 1.5E-42 T 11-10-2018 VSVS12_00430 02536e72022905035f20766f37941777 495 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 423 438 1.5E-42 T 11-10-2018 VSVS12_00430 02536e72022905035f20766f37941777 495 Gene3D G3DSA:3.50.50.60 152 280 3.7E-94 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_00430 02536e72022905035f20766f37941777 495 Gene3D G3DSA:3.50.50.60 12 341 3.7E-94 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_00430 02536e72022905035f20766f37941777 495 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 361 470 1.1E-17 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VSVS12_00430 02536e72022905035f20766f37941777 495 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 13 32 5.0E-19 T 11-10-2018 VSVS12_00430 02536e72022905035f20766f37941777 495 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 179 197 5.0E-19 T 11-10-2018 VSVS12_00430 02536e72022905035f20766f37941777 495 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 303 325 5.0E-19 T 11-10-2018 VSVS12_00430 02536e72022905035f20766f37941777 495 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 273 289 5.0E-19 T 11-10-2018 VSVS12_00430 02536e72022905035f20766f37941777 495 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 140 158 5.0E-19 T 11-10-2018 VSVS12_00430 02536e72022905035f20766f37941777 495 Gene3D G3DSA:3.30.390.30 358 481 6.4E-42 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VSVS12_00430 02536e72022905035f20766f37941777 495 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 12 338 7.1E-42 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VSVS12_00430 02536e72022905035f20766f37941777 495 Gene3D G3DSA:1.10.287.990 42 112 3.7E-94 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VSVS12_00430 02536e72022905035f20766f37941777 495 SUPERFAMILY SSF51905 6 376 1.67E-43 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_00157 b2409e0a371f3fb07cf4a0a3ed989d5c 595 Pfam PF01321 Creatinase/Prolidase N-terminal domain 8 130 7.3E-18 T 11-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 VSVS12_00157 b2409e0a371f3fb07cf4a0a3ed989d5c 595 Gene3D G3DSA:3.40.350.10 147 292 4.2E-22 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VSVS12_00157 b2409e0a371f3fb07cf4a0a3ed989d5c 595 Pfam PF16189 Creatinase/Prolidase N-terminal domain 148 306 2.1E-32 T 11-10-2018 VSVS12_00157 b2409e0a371f3fb07cf4a0a3ed989d5c 595 SUPERFAMILY SSF53092 6 129 6.28E-18 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VSVS12_00157 b2409e0a371f3fb07cf4a0a3ed989d5c 595 Pfam PF00557 Metallopeptidase family M24 309 524 7.4E-43 T 11-10-2018 IPR000994 Peptidase M24 VSVS12_00157 b2409e0a371f3fb07cf4a0a3ed989d5c 595 Gene3D G3DSA:3.90.230.10 300 593 4.3E-92 T 11-10-2018 VSVS12_00157 b2409e0a371f3fb07cf4a0a3ed989d5c 595 SUPERFAMILY SSF55920 303 559 1.57E-53 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like VSVS12_00157 b2409e0a371f3fb07cf4a0a3ed989d5c 595 Pfam PF16188 C-terminal region of peptidase_M24 534 593 9.5E-20 T 11-10-2018 IPR032416 Peptidase M24, C-terminal domain VSVS12_00157 b2409e0a371f3fb07cf4a0a3ed989d5c 595 Gene3D G3DSA:3.40.350.10 1 146 4.2E-37 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VSVS12_03958 2f03b16e3254b0692cd601f397e0ccc2 259 Gene3D G3DSA:3.30.479.30 47 178 1.5E-47 T 11-10-2018 VSVS12_03958 2f03b16e3254b0692cd601f397e0ccc2 259 Pfam PF01145 SPFH domain / Band 7 family 24 192 1.1E-33 T 11-10-2018 IPR001107 Band 7 domain VSVS12_03958 2f03b16e3254b0692cd601f397e0ccc2 259 SUPERFAMILY SSF117892 50 183 3.27E-42 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily VSVS12_03958 2f03b16e3254b0692cd601f397e0ccc2 259 PRINTS PR00721 Stomatin signature 73 94 3.9E-62 T 11-10-2018 IPR001972 Stomatin family GO:0016020 VSVS12_03958 2f03b16e3254b0692cd601f397e0ccc2 259 PRINTS PR00721 Stomatin signature 26 48 3.9E-62 T 11-10-2018 IPR001972 Stomatin family GO:0016020 VSVS12_03958 2f03b16e3254b0692cd601f397e0ccc2 259 PRINTS PR00721 Stomatin signature 196 219 3.9E-62 T 11-10-2018 IPR001972 Stomatin family GO:0016020 VSVS12_03958 2f03b16e3254b0692cd601f397e0ccc2 259 PRINTS PR00721 Stomatin signature 128 151 3.9E-62 T 11-10-2018 IPR001972 Stomatin family GO:0016020 VSVS12_03958 2f03b16e3254b0692cd601f397e0ccc2 259 PRINTS PR00721 Stomatin signature 108 125 3.9E-62 T 11-10-2018 IPR001972 Stomatin family GO:0016020 VSVS12_03958 2f03b16e3254b0692cd601f397e0ccc2 259 PRINTS PR00721 Stomatin signature 152 170 3.9E-62 T 11-10-2018 IPR001972 Stomatin family GO:0016020 VSVS12_03958 2f03b16e3254b0692cd601f397e0ccc2 259 PRINTS PR00721 Stomatin signature 171 192 3.9E-62 T 11-10-2018 IPR001972 Stomatin family GO:0016020 VSVS12_03958 2f03b16e3254b0692cd601f397e0ccc2 259 SMART SM00244 19 176 1.3E-62 T 11-10-2018 IPR001107 Band 7 domain VSVS12_02662 c00dd60f7ec2439e508aed9c2a8901e3 408 Gene3D G3DSA:3.50.50.60 6 339 2.0E-122 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_02662 c00dd60f7ec2439e508aed9c2a8901e3 408 Pfam PF01494 FAD binding domain 5 348 7.9E-30 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 VSVS12_02662 c00dd60f7ec2439e508aed9c2a8901e3 408 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 4.7E-18 T 11-10-2018 VSVS12_02662 c00dd60f7ec2439e508aed9c2a8901e3 408 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 4.7E-18 T 11-10-2018 VSVS12_02662 c00dd60f7ec2439e508aed9c2a8901e3 408 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 4.7E-18 T 11-10-2018 VSVS12_02662 c00dd60f7ec2439e508aed9c2a8901e3 408 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 4.7E-18 T 11-10-2018 VSVS12_02662 c00dd60f7ec2439e508aed9c2a8901e3 408 Gene3D G3DSA:3.30.9.50 80 270 2.0E-122 T 11-10-2018 VSVS12_02662 c00dd60f7ec2439e508aed9c2a8901e3 408 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 11-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 VSVS12_02662 c00dd60f7ec2439e508aed9c2a8901e3 408 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 6 391 8.1E-137 T 11-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 VSVS12_02662 c00dd60f7ec2439e508aed9c2a8901e3 408 SUPERFAMILY SSF51905 5 383 3.74E-59 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_04290 9dfaeb05db505ffdb1c2b1d5981c0d60 326 SUPERFAMILY SSF56349 107 322 1.06E-44 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VSVS12_04290 9dfaeb05db505ffdb1c2b1d5981c0d60 326 Pfam PF00589 Phage integrase family 111 312 1.2E-43 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VSVS12_04290 9dfaeb05db505ffdb1c2b1d5981c0d60 326 Gene3D G3DSA:1.10.443.10 104 316 1.9E-71 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VSVS12_04290 9dfaeb05db505ffdb1c2b1d5981c0d60 326 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 12 89 1.6E-22 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VSVS12_04290 9dfaeb05db505ffdb1c2b1d5981c0d60 326 Gene3D G3DSA:1.10.150.130 7 100 6.7E-26 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal VSVS12_04290 9dfaeb05db505ffdb1c2b1d5981c0d60 326 TIGRFAM TIGR02249 integrase_gron: integron integrase 11 326 7.2E-145 T 11-10-2018 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 VSVS12_01914 9927e9c7346d11801af531ee11eb54e4 396 SUPERFAMILY SSF53383 1 391 9.83E-112 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VSVS12_01914 9927e9c7346d11801af531ee11eb54e4 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 2.0E-38 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VSVS12_01914 9927e9c7346d11801af531ee11eb54e4 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 2.0E-38 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VSVS12_01914 9927e9c7346d11801af531ee11eb54e4 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 2.0E-38 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VSVS12_01914 9927e9c7346d11801af531ee11eb54e4 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 2.0E-38 T 11-10-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 VSVS12_01914 9927e9c7346d11801af531ee11eb54e4 396 Gene3D G3DSA:3.40.640.10 45 315 3.5E-157 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VSVS12_01914 9927e9c7346d11801af531ee11eb54e4 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 11-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 VSVS12_01914 9927e9c7346d11801af531ee11eb54e4 396 Gene3D G3DSA:3.90.1150.10 11 389 3.5E-157 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VSVS12_01914 9927e9c7346d11801af531ee11eb54e4 396 Pfam PF00155 Aminotransferase class I and II 27 392 6.7E-80 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VSVS12_02848 2cf8c55e177eb48bd554b9fd8e74b834 165 Pfam PF17283 SprT-like zinc ribbon domain 120 160 2.0E-11 T 11-10-2018 IPR035240 SprT-like, zinc ribbon domain VSVS12_02848 2cf8c55e177eb48bd554b9fd8e74b834 165 Pfam PF10263 SprT-like family 16 114 1.2E-17 T 11-10-2018 IPR006640 SprT-like VSVS12_02848 2cf8c55e177eb48bd554b9fd8e74b834 165 SMART SM00731 11 160 3.5E-53 T 11-10-2018 IPR006640 SprT-like VSVS12_02848 2cf8c55e177eb48bd554b9fd8e74b834 165 Hamap MF_00746 Protein SprT [sprT]. 7 160 41.443 T 11-10-2018 IPR023483 Uncharacterised protein family SprT VSVS12_02338 95d7aab724e3c410f79a249f461b8cb1 455 Gene3D G3DSA:3.40.50.450 121 450 5.9E-124 T 11-10-2018 VSVS12_02338 95d7aab724e3c410f79a249f461b8cb1 455 Pfam PF14793 Domain of unknown function (DUF4478) 4 109 2.1E-50 T 11-10-2018 IPR027820 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH, N-terminal KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 VSVS12_02338 95d7aab724e3c410f79a249f461b8cb1 455 SUPERFAMILY SSF102405 119 327 1.98E-42 T 11-10-2018 VSVS12_02338 95d7aab724e3c410f79a249f461b8cb1 455 Gene3D G3DSA:3.30.1850.10 1 120 6.8E-57 T 11-10-2018 IPR037153 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidase YgdH-like superfamily KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 VSVS12_02338 95d7aab724e3c410f79a249f461b8cb1 455 Pfam PF11892 Domain of unknown function (DUF3412) 330 450 1.3E-56 T 11-10-2018 IPR021826 Domain of unknown function DUF3412 KEGG: 00230+3.2.2.4|KEGG: 00240+3.2.2.10|MetaCyc: PWY-6617|MetaCyc: PWY-7569|MetaCyc: PWY-7570 VSVS12_02338 95d7aab724e3c410f79a249f461b8cb1 455 Pfam PF03641 Possible lysine decarboxylase 187 326 1.5E-35 T 11-10-2018 IPR031100 LOG family VSVS12_02910 bcb45b25359e500c93e9dda59a37d5cb 373 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 10 344 7.0E-152 T 11-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 VSVS12_02910 bcb45b25359e500c93e9dda59a37d5cb 373 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 189 200 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VSVS12_02910 bcb45b25359e500c93e9dda59a37d5cb 373 Pfam PF13484 4Fe-4S double cluster binding domain 188 252 3.2E-19 T 11-10-2018 VSVS12_02910 bcb45b25359e500c93e9dda59a37d5cb 373 SUPERFAMILY SSF54862 165 311 1.55E-19 T 11-10-2018 VSVS12_02910 bcb45b25359e500c93e9dda59a37d5cb 373 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 3 311 50.836 T 11-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 VSVS12_02910 bcb45b25359e500c93e9dda59a37d5cb 373 Pfam PF08331 Domain of unknown function (DUF1730) 58 136 4.5E-24 T 11-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 VSVS12_01633 9fee0c4b738dcfa82d0e376a3bdbfed2 472 SUPERFAMILY SSF55811 33 163 2.98E-17 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VSVS12_01633 9fee0c4b738dcfa82d0e376a3bdbfed2 472 SUPERFAMILY SSF48317 200 354 1.14E-5 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily VSVS12_01633 9fee0c4b738dcfa82d0e376a3bdbfed2 472 Pfam PF00293 NUDIX domain 33 159 3.5E-12 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VSVS12_01633 9fee0c4b738dcfa82d0e376a3bdbfed2 472 Gene3D G3DSA:3.90.79.10 28 170 4.1E-12 T 11-10-2018 VSVS12_01633 9fee0c4b738dcfa82d0e376a3bdbfed2 472 ProSitePatterns PS00893 Nudix box signature. 59 80 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VSVS12_00534 f118ea4b584cabef9de86fa4c9e490c1 451 SUPERFAMILY SSF158791 12 136 1.31E-30 T 11-10-2018 VSVS12_00534 f118ea4b584cabef9de86fa4c9e490c1 451 Pfam PF01769 Divalent cation transporter 323 444 7.2E-23 T 11-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 VSVS12_00534 f118ea4b584cabef9de86fa4c9e490c1 451 Gene3D G3DSA:3.10.580.10 135 262 1.7E-36 T 11-10-2018 VSVS12_00534 f118ea4b584cabef9de86fa4c9e490c1 451 Gene3D G3DSA:1.25.60.10 8 134 6.7E-20 T 11-10-2018 IPR038076 MgtE, N-terminal domain superfamily VSVS12_00534 f118ea4b584cabef9de86fa4c9e490c1 451 SUPERFAMILY SSF54631 138 278 9.98E-27 T 11-10-2018 VSVS12_00534 f118ea4b584cabef9de86fa4c9e490c1 451 Gene3D G3DSA:1.10.357.20 277 451 1.3E-44 T 11-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain VSVS12_00534 f118ea4b584cabef9de86fa4c9e490c1 451 SMART SM00924 36 139 2.0E-36 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain VSVS12_00534 f118ea4b584cabef9de86fa4c9e490c1 451 SUPERFAMILY SSF161093 280 450 1.18E-43 T 11-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 VSVS12_00534 f118ea4b584cabef9de86fa4c9e490c1 451 TIGRFAM TIGR00400 mgtE: magnesium transporter 20 451 3.6E-86 T 11-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 VSVS12_00534 f118ea4b584cabef9de86fa4c9e490c1 451 Pfam PF00571 CBS domain 139 196 2.6E-6 T 11-10-2018 IPR000644 CBS domain VSVS12_00534 f118ea4b584cabef9de86fa4c9e490c1 451 Pfam PF03448 MgtE intracellular N domain 36 137 3.9E-26 T 11-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain VSVS12_03542 4dcb559c29c1313b23628c070358595f 541 Pfam PF03853 YjeF-related protein N-terminus 30 189 7.1E-43 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 VSVS12_03542 4dcb559c29c1313b23628c070358595f 541 Gene3D G3DSA:3.40.1190.20 241 518 3.7E-73 T 11-10-2018 IPR029056 Ribokinase-like VSVS12_03542 4dcb559c29c1313b23628c070358595f 541 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 250 515 6.9E-57 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 VSVS12_03542 4dcb559c29c1313b23628c070358595f 541 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 18 207 5.8E-47 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 VSVS12_03542 4dcb559c29c1313b23628c070358595f 541 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 244 527 20.156 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 VSVS12_03542 4dcb559c29c1313b23628c070358595f 541 Pfam PF01256 Carbohydrate kinase 268 513 3.3E-49 T 11-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 VSVS12_03542 4dcb559c29c1313b23628c070358595f 541 SUPERFAMILY SSF53613 244 514 1.41E-65 T 11-10-2018 IPR029056 Ribokinase-like VSVS12_03542 4dcb559c29c1313b23628c070358595f 541 SUPERFAMILY SSF64153 7 265 6.41E-58 T 11-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 VSVS12_03542 4dcb559c29c1313b23628c070358595f 541 Gene3D G3DSA:3.40.50.10260 4 215 1.4E-55 T 11-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 VSVS12_03542 4dcb559c29c1313b23628c070358595f 541 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 9 210 21.261 T 11-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 VSVS12_03542 4dcb559c29c1313b23628c070358595f 541 PIRSF PIRSF017184 6 520 1.3E-113 T 11-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 VSVS12_04100 d8bdd8960a63c8dc14ca91251b536db6 331 Gene3D G3DSA:3.40.1190.20 1 311 1.2E-95 T 11-10-2018 IPR029056 Ribokinase-like VSVS12_04100 d8bdd8960a63c8dc14ca91251b536db6 331 SUPERFAMILY SSF53613 1 305 6.55E-81 T 11-10-2018 IPR029056 Ribokinase-like VSVS12_04100 d8bdd8960a63c8dc14ca91251b536db6 331 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 243 256 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VSVS12_04100 d8bdd8960a63c8dc14ca91251b536db6 331 Pfam PF00294 pfkB family carbohydrate kinase 1 297 1.6E-70 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB VSVS12_04100 d8bdd8960a63c8dc14ca91251b536db6 331 PRINTS PR00990 Ribokinase signature 214 225 7.8E-5 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VSVS12_04100 d8bdd8960a63c8dc14ca91251b536db6 331 PRINTS PR00990 Ribokinase signature 22 41 7.8E-5 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VSVS12_04100 d8bdd8960a63c8dc14ca91251b536db6 331 PRINTS PR00990 Ribokinase signature 175 190 7.8E-5 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VSVS12_00490 aff67a546b865cf21dfcd29dcaccc5bc 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 11-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00490 aff67a546b865cf21dfcd29dcaccc5bc 144 SUPERFAMILY SSF52080 4 143 1.19E-46 T 11-10-2018 IPR036227 Ribosomal L18e/L15P superfamily VSVS12_00490 aff67a546b865cf21dfcd29dcaccc5bc 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 9.3E-32 T 11-10-2018 IPR021131 Ribosomal protein L18e/L15P VSVS12_00490 aff67a546b865cf21dfcd29dcaccc5bc 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.035 T 11-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 VSVS12_00490 aff67a546b865cf21dfcd29dcaccc5bc 144 Gene3D G3DSA:3.100.10.10 70 144 1.3E-13 T 11-10-2018 VSVS12_00490 aff67a546b865cf21dfcd29dcaccc5bc 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 1.4E-51 T 11-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00070 c6c5914f832e58710d6ebb65b1fe8a79 612 SUPERFAMILY SSF52540 18 203 5.01E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00070 c6c5914f832e58710d6ebb65b1fe8a79 612 Pfam PF09382 RQC domain 410 518 1.8E-37 T 11-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 VSVS12_00070 c6c5914f832e58710d6ebb65b1fe8a79 612 Pfam PF16124 RecQ zinc-binding 347 408 3.5E-18 T 11-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain VSVS12_00070 c6c5914f832e58710d6ebb65b1fe8a79 612 Pfam PF00271 Helicase conserved C-terminal domain 230 334 4.1E-20 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_00070 c6c5914f832e58710d6ebb65b1fe8a79 612 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 19 467 8.0E-188 T 11-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 VSVS12_00070 c6c5914f832e58710d6ebb65b1fe8a79 612 SUPERFAMILY SSF47819 535 611 5.01E-26 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 VSVS12_00070 c6c5914f832e58710d6ebb65b1fe8a79 612 Gene3D G3DSA:1.10.150.80 527 611 2.1E-28 T 11-10-2018 VSVS12_00070 c6c5914f832e58710d6ebb65b1fe8a79 612 SMART SM00487 26 222 9.4E-26 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VSVS12_00070 c6c5914f832e58710d6ebb65b1fe8a79 612 Gene3D G3DSA:1.10.10.10 410 522 2.9E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_00070 c6c5914f832e58710d6ebb65b1fe8a79 612 Gene3D G3DSA:3.40.50.300 214 409 5.9E-60 T 11-10-2018 VSVS12_00070 c6c5914f832e58710d6ebb65b1fe8a79 612 Pfam PF00570 HRDC domain 538 604 2.2E-22 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 VSVS12_00070 c6c5914f832e58710d6ebb65b1fe8a79 612 SMART SM00490 254 335 1.1E-28 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_00070 c6c5914f832e58710d6ebb65b1fe8a79 612 SUPERFAMILY SSF52540 212 462 1.06E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00070 c6c5914f832e58710d6ebb65b1fe8a79 612 Gene3D G3DSA:3.40.50.300 9 212 4.8E-80 T 11-10-2018 VSVS12_00070 c6c5914f832e58710d6ebb65b1fe8a79 612 SMART SM00341 534 612 1.7E-23 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 VSVS12_00070 c6c5914f832e58710d6ebb65b1fe8a79 612 SMART SM00956 415 518 2.0E-51 T 11-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 VSVS12_00070 c6c5914f832e58710d6ebb65b1fe8a79 612 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 18 607 4.0E-252 T 11-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 VSVS12_00070 c6c5914f832e58710d6ebb65b1fe8a79 612 Pfam PF00270 DEAD/DEAH box helicase 33 190 1.4E-17 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Gene3D G3DSA:2.150.10.10 683 722 4.5E-7 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 SUPERFAMILY SSF51120 180 252 3.27E-16 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 409 427 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 355 373 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 SUPERFAMILY SSF51120 3 61 3.01E-11 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1329 1347 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Gene3D G3DSA:2.150.10.10 244 295 6.1E-11 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Gene3D G3DSA:2.150.10.10 296 345 2.3E-10 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Gene3D G3DSA:2.150.10.10 1 162 1.3E-11 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Gene3D G3DSA:2.150.10.10 189 243 3.4E-11 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Gene3D G3DSA:2.150.10.10 397 465 5.2E-13 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 256 274 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Gene3D G3DSA:2.160.20.160 1021 1161 3.7E-19 T 11-10-2018 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 274 292 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Gene3D G3DSA:2.150.10.10 1254 1314 1.3E-14 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Gene3D G3DSA:2.150.10.10 1203 1253 4.7E-14 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Gene3D G3DSA:2.150.10.10 466 526 4.3E-10 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Gene3D G3DSA:2.150.10.10 346 396 2.4E-11 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Gene3D G3DSA:2.150.10.10 812 861 2.7E-8 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 SUPERFAMILY SSF51120 533 651 2.35E-22 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 SUPERFAMILY SSF51120 866 981 1.57E-22 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Gene3D G3DSA:2.150.10.10 1315 1448 7.0E-16 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Gene3D G3DSA:2.150.10.10 759 811 5.9E-8 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Gene3D G3DSA:2.150.10.10 640 682 1.4E-9 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Gene3D G3DSA:2.150.10.10 723 758 1.9E-7 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Gene3D G3DSA:2.150.10.10 903 943 5.8E-9 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 364 382 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 980 996 0.5 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 737 753 2.4 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 241 258 0.041 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1288 1304 0.038 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1037 1050 68.0 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 504 519 0.5 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1342 1358 0.27 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 431 447 0.13 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 39 55 0.26 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 832 843 5.9 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 449 465 0.36 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 331 347 0.026 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1324 1340 0.013 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3 19 1.2 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 192 204 0.77 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 817 828 38.0 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 683 699 0.21 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 845 860 4.8 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1162 1178 0.14 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1054 1069 8.1 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1234 1250 0.64 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 611 627 0.17 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 721 735 0.11 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 665 681 0.23 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 899 915 0.0022 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1127 1142 0.45 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1179 1195 0.32 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1270 1286 0.044 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1252 1268 0.18 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 962 978 0.014 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 998 1014 1.5 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 368 384 0.47 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 755 770 0.0033 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1216 1232 1.1E-4 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 646 663 0.016 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 702 717 0.34 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 278 294 0.48 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1091 1106 0.2 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 412 429 0.0071 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1072 1087 5.4 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 863 878 7.8 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 593 609 0.11 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 350 366 0.021 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 772 788 1.1 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 260 276 0.51 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 467 483 0.094 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 295 312 0.29 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1109 1124 9.0 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 636 645 57.0 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 792 806 0.96 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 485 501 0.7 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 917 933 2.2 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 521 537 3.3 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 882 896 0.11 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 557 573 63.0 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 206 222 2.1E-4 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1305 1322 0.76 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 394 411 0.51 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 935 951 0.23 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 540 555 0.57 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 314 330 0.26 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1198 1214 0.25 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 1144 1160 1.3 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 SUPERFAMILY SSF51120 421 568 9.0E-22 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Gene3D G3DSA:2.150.10.10 862 902 3.1E-7 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Gene3D G3DSA:2.150.10.10 1162 1202 5.6E-8 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 SUPERFAMILY SSF51120 1206 1294 2.96E-20 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 PRINTS PR00313 NodO calcium binding signature 194 205 5.9E-9 T 11-10-2018 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 PRINTS PR00313 NodO calcium binding signature 350 359 5.9E-9 T 11-10-2018 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 PRINTS PR00313 NodO calcium binding signature 287 295 5.9E-9 T 11-10-2018 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 PRINTS PR00313 NodO calcium binding signature 242 250 5.9E-9 T 11-10-2018 VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 994 1012 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 SUPERFAMILY SSF51120 1264 1406 5.76E-28 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 958 976 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 SUPERFAMILY SSF51120 238 403 1.99E-24 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1338 1356 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 SUPERFAMILY SSF51120 651 810 8.72E-27 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Gene3D G3DSA:2.150.10.10 950 1020 1.0E-12 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Gene3D G3DSA:2.150.10.10 527 584 2.6E-6 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 418 436 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 Gene3D G3DSA:2.150.10.10 585 639 4.7E-9 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_03562 d75884a5204d78f7ef6ad6f341f23d19 1511 SUPERFAMILY SSF51120 1023 1212 5.36E-17 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_03726 df2b264d63824786446c079c082780b5 686 PIRSF PIRSF036917 1 684 0.0 T 11-10-2018 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 VSVS12_03726 df2b264d63824786446c079c082780b5 686 Pfam PF00128 Alpha amylase, catalytic domain 238 605 6.2E-49 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VSVS12_03726 df2b264d63824786446c079c082780b5 686 SUPERFAMILY SSF51445 194 650 1.4E-82 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily VSVS12_03726 df2b264d63824786446c079c082780b5 686 SMART SM00642 205 645 5.5E-89 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VSVS12_03726 df2b264d63824786446c079c082780b5 686 Gene3D G3DSA:3.20.20.80 188 420 2.0E-55 T 11-10-2018 VSVS12_03726 df2b264d63824786446c079c082780b5 686 Gene3D G3DSA:3.20.20.80 432 652 5.8E-36 T 11-10-2018 VSVS12_03469 deec45c0af1d0335709fad7852a5e24a 459 SUPERFAMILY SSF51338 374 459 7.2E-11 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VSVS12_03469 deec45c0af1d0335709fad7852a5e24a 459 SUPERFAMILY SSF51556 79 398 2.5E-85 T 11-10-2018 IPR032466 Metal-dependent hydrolase VSVS12_03469 deec45c0af1d0335709fad7852a5e24a 459 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 29 455 1.0E-113 T 11-10-2018 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|Reactome: R-HSA-74259 VSVS12_03469 deec45c0af1d0335709fad7852a5e24a 459 Pfam PF01979 Amidohydrolase family 76 458 3.3E-51 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VSVS12_03469 deec45c0af1d0335709fad7852a5e24a 459 Gene3D G3DSA:3.20.20.140 80 401 4.6E-142 T 11-10-2018 VSVS12_03469 deec45c0af1d0335709fad7852a5e24a 459 Gene3D G3DSA:2.30.40.10 16 456 4.6E-142 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VSVS12_00289 f90969fef3bbf14a74508caefe4a0c95 674 TIGRFAM TIGR02517 type_II_gspD: type II secretion system protein D 30 620 1.4E-157 T 11-10-2018 IPR013356 Type II secretion system GspD GO:0008565|GO:0015627|GO:0015628|GO:0019867 VSVS12_00289 f90969fef3bbf14a74508caefe4a0c95 674 Pfam PF00263 Bacterial type II and III secretion system protein 449 611 2.2E-50 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 VSVS12_00289 f90969fef3bbf14a74508caefe4a0c95 674 Gene3D G3DSA:3.30.1370.120 188 258 4.1E-21 T 11-10-2018 IPR038591 NolW-like superfamily VSVS12_00289 f90969fef3bbf14a74508caefe4a0c95 674 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 556 589 - T 11-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 VSVS12_00289 f90969fef3bbf14a74508caefe4a0c95 674 PRINTS PR01032 Gene IV protein signature 538 566 2.3E-11 T 11-10-2018 VSVS12_00289 f90969fef3bbf14a74508caefe4a0c95 674 PRINTS PR01032 Gene IV protein signature 591 613 2.3E-11 T 11-10-2018 VSVS12_00289 f90969fef3bbf14a74508caefe4a0c95 674 PRINTS PR01032 Gene IV protein signature 470 493 2.3E-11 T 11-10-2018 VSVS12_00289 f90969fef3bbf14a74508caefe4a0c95 674 PRINTS PR00811 Bacterial general secretion pathway protein D signature 445 469 4.8E-38 T 11-10-2018 IPR001775 GspD/PilQ family VSVS12_00289 f90969fef3bbf14a74508caefe4a0c95 674 PRINTS PR00811 Bacterial general secretion pathway protein D signature 575 593 4.8E-38 T 11-10-2018 IPR001775 GspD/PilQ family VSVS12_00289 f90969fef3bbf14a74508caefe4a0c95 674 PRINTS PR00811 Bacterial general secretion pathway protein D signature 598 612 4.8E-38 T 11-10-2018 IPR001775 GspD/PilQ family VSVS12_00289 f90969fef3bbf14a74508caefe4a0c95 674 PRINTS PR00811 Bacterial general secretion pathway protein D signature 343 353 4.8E-38 T 11-10-2018 IPR001775 GspD/PilQ family VSVS12_00289 f90969fef3bbf14a74508caefe4a0c95 674 PRINTS PR00811 Bacterial general secretion pathway protein D signature 480 490 4.8E-38 T 11-10-2018 IPR001775 GspD/PilQ family VSVS12_00289 f90969fef3bbf14a74508caefe4a0c95 674 Gene3D G3DSA:3.30.1370.120 263 341 3.2E-17 T 11-10-2018 IPR038591 NolW-like superfamily VSVS12_00289 f90969fef3bbf14a74508caefe4a0c95 674 Pfam PF03958 Bacterial type II/III secretion system short domain 191 258 1.1E-15 T 11-10-2018 IPR005644 NolW-like VSVS12_00289 f90969fef3bbf14a74508caefe4a0c95 674 Pfam PF03958 Bacterial type II/III secretion system short domain 266 343 7.1E-19 T 11-10-2018 IPR005644 NolW-like VSVS12_00289 f90969fef3bbf14a74508caefe4a0c95 674 Pfam PF03958 Bacterial type II/III secretion system short domain 125 186 5.4E-9 T 11-10-2018 IPR005644 NolW-like VSVS12_00289 f90969fef3bbf14a74508caefe4a0c95 674 Gene3D G3DSA:3.30.1370.120 20 185 1.0E-52 T 11-10-2018 IPR038591 NolW-like superfamily VSVS12_01986 ce6fb972fda2c25f17b02f256d458653 186 Gene3D G3DSA:3.40.630.30 1 158 3.7E-43 T 11-10-2018 VSVS12_01986 ce6fb972fda2c25f17b02f256d458653 186 Pfam PF13302 Acetyltransferase (GNAT) domain 6 148 4.0E-35 T 11-10-2018 IPR000182 GNAT domain VSVS12_01986 ce6fb972fda2c25f17b02f256d458653 186 SUPERFAMILY SSF55729 1 151 5.13E-39 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_01575 13601378ca5b2ac1d04affec503995d3 153 Pfam PF04191 Phospholipid methyltransferase 43 142 4.7E-11 T 11-10-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 VSVS12_01575 13601378ca5b2ac1d04affec503995d3 153 Gene3D G3DSA:1.20.120.1630 4 153 2.4E-24 T 11-10-2018 VSVS12_01575 13601378ca5b2ac1d04affec503995d3 153 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 118 153 3.0E-10 T 11-10-2018 VSVS12_04293 1a3766b9e450cfde8638ccbc3d6c0ac5 129 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 41 127 1.2E-36 T 11-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 VSVS12_04293 1a3766b9e450cfde8638ccbc3d6c0ac5 129 SUPERFAMILY SSF55200 41 129 2.09E-34 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 VSVS12_04293 1a3766b9e450cfde8638ccbc3d6c0ac5 129 ProSitePatterns PS00938 Initiation factor 3 signature. 16 29 - T 11-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 VSVS12_04293 1a3766b9e450cfde8638ccbc3d6c0ac5 129 Gene3D G3DSA:3.10.20.80 1 33 1.4E-14 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 VSVS12_04293 1a3766b9e450cfde8638ccbc3d6c0ac5 129 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 1 129 2.2E-58 T 11-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 VSVS12_04293 1a3766b9e450cfde8638ccbc3d6c0ac5 129 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 1 34 4.5E-14 T 11-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 VSVS12_04293 1a3766b9e450cfde8638ccbc3d6c0ac5 129 Gene3D G3DSA:3.30.110.10 34 129 5.1E-39 T 11-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 VSVS12_04293 1a3766b9e450cfde8638ccbc3d6c0ac5 129 SUPERFAMILY SSF54364 1 36 1.57E-13 T 11-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 VSVS12_03036 d37dcdb1fae684f302375cb8a1b334b0 254 Pfam PF06035 Bacterial transglutaminase-like cysteine proteinase BTLCP 92 197 1.6E-13 T 11-10-2018 IPR010319 Transglutaminase-like cysteine peptidase, predicted VSVS12_03036 d37dcdb1fae684f302375cb8a1b334b0 254 Gene3D G3DSA:3.10.620.30 55 245 8.5E-73 T 11-10-2018 VSVS12_01552 5ccfa7b9dfa71dc4af5d7de3563e0f25 301 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 134 299 2.0E-76 T 11-10-2018 IPR005642 Lysine exporter LysO VSVS12_01552 5ccfa7b9dfa71dc4af5d7de3563e0f25 301 Pfam PF03956 Lysine exporter LysO 112 297 2.0E-52 T 11-10-2018 IPR005642 Lysine exporter LysO VSVS12_01009 8cd41c20eafadc263c64057f06a7730d 284 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 187 193 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VSVS12_01009 8cd41c20eafadc263c64057f06a7730d 284 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 7 282 3.5E-82 T 11-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 VSVS12_01009 8cd41c20eafadc263c64057f06a7730d 284 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 7 282 43.972 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 VSVS12_01009 8cd41c20eafadc263c64057f06a7730d 284 Gene3D G3DSA:3.40.50.150 91 283 1.6E-57 T 11-10-2018 VSVS12_01009 8cd41c20eafadc263c64057f06a7730d 284 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 29 278 2.4E-90 T 11-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 VSVS12_01009 8cd41c20eafadc263c64057f06a7730d 284 Gene3D G3DSA:1.10.8.10 6 90 1.7E-25 T 11-10-2018 VSVS12_01009 8cd41c20eafadc263c64057f06a7730d 284 SUPERFAMILY SSF53335 8 280 4.4E-56 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_01009 8cd41c20eafadc263c64057f06a7730d 284 Pfam PF13847 Methyltransferase domain 116 247 8.1E-18 T 11-10-2018 IPR025714 Methyltransferase domain VSVS12_00546 4742b27175379489d25a5a3b3f1467fc 279 Pfam PF00005 ABC transporter 37 184 4.5E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_00546 4742b27175379489d25a5a3b3f1467fc 279 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 234 249 1.1E-4 T 11-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal VSVS12_00546 4742b27175379489d25a5a3b3f1467fc 279 Gene3D G3DSA:3.40.50.300 18 266 9.1E-66 T 11-10-2018 VSVS12_00546 4742b27175379489d25a5a3b3f1467fc 279 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_00546 4742b27175379489d25a5a3b3f1467fc 279 SUPERFAMILY SSF52540 20 256 1.61E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00546 4742b27175379489d25a5a3b3f1467fc 279 SMART SM00382 45 259 1.2E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_02857 7e10689249dd6d6a6a3f792219ed6d2f 530 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 342 499 3.7E-9 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VSVS12_02857 7e10689249dd6d6a6a3f792219ed6d2f 530 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 53 244 2.4E-9 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VSVS12_02857 7e10689249dd6d6a6a3f792219ed6d2f 530 SUPERFAMILY SSF161098 4 244 1.7E-41 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_02857 7e10689249dd6d6a6a3f792219ed6d2f 530 Gene3D G3DSA:1.10.3720.10 1 249 6.6E-42 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_02857 7e10689249dd6d6a6a3f792219ed6d2f 530 Gene3D G3DSA:1.10.3720.10 272 518 1.4E-28 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_02857 7e10689249dd6d6a6a3f792219ed6d2f 530 SUPERFAMILY SSF161098 265 510 1.83E-33 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_02857 7e10689249dd6d6a6a3f792219ed6d2f 530 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 2 506 6.1E-160 T 11-10-2018 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 VSVS12_01537 43ff9dbe751b0ca368d60341351aebc5 642 SUPERFAMILY SSF51206 200 310 1.23E-19 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like VSVS12_01537 43ff9dbe751b0ca368d60341351aebc5 642 Gene3D G3DSA:2.60.120.10 151 318 7.9E-20 T 11-10-2018 IPR014710 RmlC-like jelly roll fold VSVS12_01537 43ff9dbe751b0ca368d60341351aebc5 642 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 530 638 3.9E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_01537 43ff9dbe751b0ca368d60341351aebc5 642 SMART SM00387 527 640 3.3E-26 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_01537 43ff9dbe751b0ca368d60341351aebc5 642 Gene3D G3DSA:3.40.50.2300 2 141 4.5E-8 T 11-10-2018 VSVS12_01537 43ff9dbe751b0ca368d60341351aebc5 642 PRINTS PR00344 Bacterial sensor protein C-terminal signature 568 582 1.2E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_01537 43ff9dbe751b0ca368d60341351aebc5 642 PRINTS PR00344 Bacterial sensor protein C-terminal signature 586 596 1.2E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_01537 43ff9dbe751b0ca368d60341351aebc5 642 PRINTS PR00344 Bacterial sensor protein C-terminal signature 600 618 1.2E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_01537 43ff9dbe751b0ca368d60341351aebc5 642 Pfam PF00027 Cyclic nucleotide-binding domain 202 289 3.3E-16 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain VSVS12_01537 43ff9dbe751b0ca368d60341351aebc5 642 Pfam PF00512 His Kinase A (phospho-acceptor) domain 340 377 7.2E-7 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_01537 43ff9dbe751b0ca368d60341351aebc5 642 SUPERFAMILY SSF55874 479 638 1.22E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_01537 43ff9dbe751b0ca368d60341351aebc5 642 Gene3D G3DSA:3.30.565.10 491 642 3.4E-37 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_01537 43ff9dbe751b0ca368d60341351aebc5 642 SUPERFAMILY SSF52172 3 134 1.69E-6 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_01537 43ff9dbe751b0ca368d60341351aebc5 642 SUPERFAMILY SSF47384 335 372 8.24E-7 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VSVS12_00602 b1f645fe4efcfa56e9bc5c9fd68e0a0a 250 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 25 1.4E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_00602 b1f645fe4efcfa56e9bc5c9fd68e0a0a 250 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_00602 b1f645fe4efcfa56e9bc5c9fd68e0a0a 250 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 25 9.4E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_03718 bd33a50c5d7e648cdc05701054023fc1 280 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 67 197 5.5E-29 T 11-10-2018 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 VSVS12_03580 2b755d9ac500b05aade7a5c5d8f01b08 693 SUPERFAMILY SSF56801 44 669 2.35E-107 T 11-10-2018 VSVS12_03580 2b755d9ac500b05aade7a5c5d8f01b08 693 ProSitePatterns PS00455 Putative AMP-binding domain signature. 312 323 - T 11-10-2018 IPR020845 AMP-binding, conserved site VSVS12_03580 2b755d9ac500b05aade7a5c5d8f01b08 693 Gene3D G3DSA:3.30.300.30 567 690 2.4E-14 T 11-10-2018 VSVS12_03580 2b755d9ac500b05aade7a5c5d8f01b08 693 TIGRFAM TIGR01217 ac_ac_CoA_syn: acetoacetate-CoA ligase 10 683 2.6E-223 T 11-10-2018 IPR005914 Acetoacetyl-CoA synthase GO:0006629|GO:0030729 KEGG: 00280+6.2.1.16|KEGG: 00650+6.2.1.16|Reactome: R-HSA-77111 VSVS12_03580 2b755d9ac500b05aade7a5c5d8f01b08 693 Gene3D G3DSA:3.40.50.12780 97 563 3.1E-49 T 11-10-2018 VSVS12_03580 2b755d9ac500b05aade7a5c5d8f01b08 693 Pfam PF00501 AMP-binding enzyme 135 567 8.8E-39 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VSVS12_02371 6e51fea47d17754fb8cf5edc3c34fd2e 252 Gene3D G3DSA:3.40.1390.30 14 237 8.4E-80 T 11-10-2018 VSVS12_02371 6e51fea47d17754fb8cf5edc3c34fd2e 252 SUPERFAMILY SSF102705 1 251 2.35E-80 T 11-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily VSVS12_02371 6e51fea47d17754fb8cf5edc3c34fd2e 252 Gene3D G3DSA:3.40.1390.30 97 223 8.4E-80 T 11-10-2018 VSVS12_02371 6e51fea47d17754fb8cf5edc3c34fd2e 252 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 251 2.0E-67 T 11-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 VSVS12_02371 6e51fea47d17754fb8cf5edc3c34fd2e 252 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 238 1.5E-55 T 11-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 VSVS12_00491 89f130eebc9c8cc8aad450f909dab95c 444 Pfam PF00344 SecY translocase 76 418 2.7E-117 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VSVS12_00491 89f130eebc9c8cc8aad450f909dab95c 444 Hamap MF_01465 Protein translocase subunit SecY [secY]. 10 434 29.262 T 11-10-2018 IPR026593 Protein translocase subunit SecY VSVS12_00491 89f130eebc9c8cc8aad450f909dab95c 444 PIRSF PIRSF004557 10 442 7.2E-121 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VSVS12_00491 89f130eebc9c8cc8aad450f909dab95c 444 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 430 4.5E-134 T 11-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VSVS12_00491 89f130eebc9c8cc8aad450f909dab95c 444 SUPERFAMILY SSF103491 15 425 1.57E-130 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VSVS12_00491 89f130eebc9c8cc8aad450f909dab95c 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 371 389 1.6E-95 T 11-10-2018 VSVS12_00491 89f130eebc9c8cc8aad450f909dab95c 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 403 421 1.6E-95 T 11-10-2018 VSVS12_00491 89f130eebc9c8cc8aad450f909dab95c 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 152 177 1.6E-95 T 11-10-2018 VSVS12_00491 89f130eebc9c8cc8aad450f909dab95c 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 1.6E-95 T 11-10-2018 VSVS12_00491 89f130eebc9c8cc8aad450f909dab95c 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 1.6E-95 T 11-10-2018 VSVS12_00491 89f130eebc9c8cc8aad450f909dab95c 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 316 338 1.6E-95 T 11-10-2018 VSVS12_00491 89f130eebc9c8cc8aad450f909dab95c 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 178 201 1.6E-95 T 11-10-2018 VSVS12_00491 89f130eebc9c8cc8aad450f909dab95c 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 1.6E-95 T 11-10-2018 VSVS12_00491 89f130eebc9c8cc8aad450f909dab95c 444 PRINTS PR00303 Preprotein translocase SecY subunit signature 270 289 1.6E-95 T 11-10-2018 VSVS12_00491 89f130eebc9c8cc8aad450f909dab95c 444 ProSitePatterns PS00756 Protein secY signature 2. 171 188 - T 11-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VSVS12_00491 89f130eebc9c8cc8aad450f909dab95c 444 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 11-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VSVS12_00491 89f130eebc9c8cc8aad450f909dab95c 444 Gene3D G3DSA:1.10.3370.10 11 430 1.1E-159 T 11-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VSVS12_00858 17649c81cbfaced96592721c7642b623 323 Gene3D G3DSA:3.90.650.10 145 321 2.4E-52 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VSVS12_00858 17649c81cbfaced96592721c7642b623 323 SUPERFAMILY SSF55326 3 137 2.88E-31 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VSVS12_00858 17649c81cbfaced96592721c7642b623 323 Gene3D G3DSA:3.30.1330.10 1 143 1.5E-41 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VSVS12_00858 17649c81cbfaced96592721c7642b623 323 SUPERFAMILY SSF56042 141 306 9.12E-37 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VSVS12_00858 17649c81cbfaced96592721c7642b623 323 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 2 320 26.706 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 VSVS12_00858 17649c81cbfaced96592721c7642b623 323 Pfam PF02769 AIR synthase related protein, C-terminal domain 149 304 1.2E-10 T 11-10-2018 IPR010918 PurM-like, C-terminal domain VSVS12_00858 17649c81cbfaced96592721c7642b623 323 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 3 320 4.9E-103 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 VSVS12_00858 17649c81cbfaced96592721c7642b623 323 Pfam PF00586 AIR synthase related protein, N-terminal domain 28 137 2.6E-21 T 11-10-2018 IPR016188 PurM-like, N-terminal domain VSVS12_00858 17649c81cbfaced96592721c7642b623 323 PIRSF PIRSF005303 1 320 2.1E-82 T 11-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 VSVS12_00643 219a23d57e916ce43db35c88725d8dd4 431 SUPERFAMILY SSF109998 28 199 5.89E-35 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily VSVS12_00643 219a23d57e916ce43db35c88725d8dd4 431 SUPERFAMILY SSF54534 281 383 9.81E-29 T 11-10-2018 VSVS12_00643 219a23d57e916ce43db35c88725d8dd4 431 Gene3D G3DSA:3.10.50.40 279 418 9.1E-38 T 11-10-2018 VSVS12_00643 219a23d57e916ce43db35c88725d8dd4 431 Hamap MF_01183 Chaperone SurA [surA]. 7 426 31.269 T 11-10-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0043165|GO:0050821|GO:0051082|GO:0060274 VSVS12_00643 219a23d57e916ce43db35c88725d8dd4 431 Pfam PF00639 PPIC-type PPIASE domain 180 271 2.9E-20 T 11-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 VSVS12_00643 219a23d57e916ce43db35c88725d8dd4 431 Pfam PF00639 PPIC-type PPIASE domain 287 378 2.7E-22 T 11-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 VSVS12_00643 219a23d57e916ce43db35c88725d8dd4 431 SUPERFAMILY SSF54534 175 273 1.24E-25 T 11-10-2018 VSVS12_00643 219a23d57e916ce43db35c88725d8dd4 431 Gene3D G3DSA:1.10.4030.30 28 276 5.4E-67 T 11-10-2018 VSVS12_00643 219a23d57e916ce43db35c88725d8dd4 431 Gene3D G3DSA:3.10.50.40 174 273 5.4E-67 T 11-10-2018 VSVS12_00643 219a23d57e916ce43db35c88725d8dd4 431 Pfam PF09312 SurA N-terminal domain 27 144 1.7E-39 T 11-10-2018 IPR015391 SurA N-terminal VSVS12_02010 15badd544236eb12fdf4c49c2dbf444f 610 Gene3D G3DSA:1.10.150.20 555 610 2.6E-25 T 11-10-2018 VSVS12_02010 15badd544236eb12fdf4c49c2dbf444f 610 Gene3D G3DSA:3.30.420.340 380 552 5.1E-45 T 11-10-2018 IPR038476 UvrC homology region 2 superfamily VSVS12_02010 15badd544236eb12fdf4c49c2dbf444f 610 SMART SM00465 17 98 1.2E-23 T 11-10-2018 IPR000305 GIY-YIG endonuclease VSVS12_02010 15badd544236eb12fdf4c49c2dbf444f 610 Pfam PF02151 UvrB/uvrC motif 204 238 4.3E-9 T 11-10-2018 IPR001943 UVR domain GO:0005515 VSVS12_02010 15badd544236eb12fdf4c49c2dbf444f 610 SUPERFAMILY SSF82771 16 100 1.12E-22 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 VSVS12_02010 15badd544236eb12fdf4c49c2dbf444f 610 Pfam PF14520 Helix-hairpin-helix domain 558 609 1.6E-10 T 11-10-2018 VSVS12_02010 15badd544236eb12fdf4c49c2dbf444f 610 Pfam PF01541 GIY-YIG catalytic domain 18 93 4.0E-11 T 11-10-2018 IPR000305 GIY-YIG endonuclease VSVS12_02010 15badd544236eb12fdf4c49c2dbf444f 610 SMART SM00278 588 607 18.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VSVS12_02010 15badd544236eb12fdf4c49c2dbf444f 610 SMART SM00278 556 575 0.14 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VSVS12_02010 15badd544236eb12fdf4c49c2dbf444f 610 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 9 589 3.6E-212 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 VSVS12_02010 15badd544236eb12fdf4c49c2dbf444f 610 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 387 542 1.2E-42 T 11-10-2018 IPR001162 UvrC family homology region VSVS12_02010 15badd544236eb12fdf4c49c2dbf444f 610 Gene3D G3DSA:3.40.1440.10 7 102 3.9E-30 T 11-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 VSVS12_02010 15badd544236eb12fdf4c49c2dbf444f 610 SUPERFAMILY SSF47781 520 609 2.32E-19 T 11-10-2018 IPR010994 RuvA domain 2-like VSVS12_02010 15badd544236eb12fdf4c49c2dbf444f 610 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 607 28.204 T 11-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 VSVS12_02010 15badd544236eb12fdf4c49c2dbf444f 610 SUPERFAMILY SSF46600 190 243 6.41E-14 T 11-10-2018 IPR036876 UVR domain superfamily VSVS12_00907 dcd4f8400a3efc0cd166938fe8f36d1e 416 SUPERFAMILY SSF53383 6 415 5.98E-183 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VSVS12_00907 dcd4f8400a3efc0cd166938fe8f36d1e 416 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 416 51.978 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VSVS12_00907 dcd4f8400a3efc0cd166938fe8f36d1e 416 Gene3D G3DSA:3.40.640.10 37 288 7.0E-185 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VSVS12_00907 dcd4f8400a3efc0cd166938fe8f36d1e 416 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 11-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VSVS12_00907 dcd4f8400a3efc0cd166938fe8f36d1e 416 PIRSF PIRSF000412 1 413 1.4E-167 T 11-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VSVS12_00907 dcd4f8400a3efc0cd166938fe8f36d1e 416 Pfam PF00464 Serine hydroxymethyltransferase 9 385 1.5E-180 T 11-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 VSVS12_00907 dcd4f8400a3efc0cd166938fe8f36d1e 416 Gene3D G3DSA:3.90.1150.10 10 393 7.0E-185 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VSVS12_01278 c766b410fa561f90ca534c6620108fd2 257 ProSitePatterns PS00894 DeoR-type HTH domain signature. 7 41 - T 11-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VSVS12_01278 c766b410fa561f90ca534c6620108fd2 257 SMART SM01134 74 235 3.1E-70 T 11-10-2018 VSVS12_01278 c766b410fa561f90ca534c6620108fd2 257 Pfam PF08220 DeoR-like helix-turn-helix domain 7 62 1.5E-15 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VSVS12_01278 c766b410fa561f90ca534c6620108fd2 257 SUPERFAMILY SSF100950 75 235 1.44E-33 T 11-10-2018 IPR037171 NagB/RpiA transferase-like VSVS12_01278 c766b410fa561f90ca534c6620108fd2 257 SUPERFAMILY SSF46785 6 72 7.89E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_01278 c766b410fa561f90ca534c6620108fd2 257 Pfam PF00455 DeoR C terminal sensor domain 78 234 5.9E-53 T 11-10-2018 IPR014036 DeoR C-terminal sensor domain VSVS12_01278 c766b410fa561f90ca534c6620108fd2 257 SMART SM00420 7 59 1.4E-12 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VSVS12_00854 4fcca9e36377315380a828c3fdcb2e21 217 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 201 9.4E-66 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VSVS12_00854 4fcca9e36377315380a828c3fdcb2e21 217 Pfam PF00677 Lumazine binding domain 100 184 9.0E-24 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VSVS12_00854 4fcca9e36377315380a828c3fdcb2e21 217 Pfam PF00677 Lumazine binding domain 3 87 2.5E-21 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VSVS12_00854 4fcca9e36377315380a828c3fdcb2e21 217 Gene3D G3DSA:2.40.30.20 1 89 1.7E-27 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VSVS12_00854 4fcca9e36377315380a828c3fdcb2e21 217 SUPERFAMILY SSF63380 93 196 9.35E-32 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VSVS12_00854 4fcca9e36377315380a828c3fdcb2e21 217 SUPERFAMILY SSF63380 1 89 2.98E-25 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VSVS12_00854 4fcca9e36377315380a828c3fdcb2e21 217 PIRSF PIRSF000498 1 211 5.6E-80 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VSVS12_00854 4fcca9e36377315380a828c3fdcb2e21 217 Gene3D G3DSA:2.40.30.20 102 205 2.0E-35 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VSVS12_04344 a66d295dc6d51133f907d3c22c441c00 313 SUPERFAMILY SSF56219 82 311 9.55E-26 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VSVS12_04344 a66d295dc6d51133f907d3c22c441c00 313 Gene3D G3DSA:3.60.10.10 89 312 3.7E-21 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VSVS12_04344 a66d295dc6d51133f907d3c22c441c00 313 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 95 246 6.6E-8 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase VSVS12_00308 8df9a7a1c49ceeb7919dc70b28c579d8 179 SUPERFAMILY SSF53271 7 178 2.62E-37 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like VSVS12_00308 8df9a7a1c49ceeb7919dc70b28c579d8 179 Gene3D G3DSA:3.40.50.2020 33 179 1.2E-17 T 11-10-2018 VSVS12_00308 8df9a7a1c49ceeb7919dc70b28c579d8 179 Pfam PF00156 Phosphoribosyl transferase domain 87 178 4.9E-9 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 VSVS12_01326 c1d9d71d2dda7b40756985faf5fc1bef 371 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 59 359 1.0E-65 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VSVS12_01326 c1d9d71d2dda7b40756985faf5fc1bef 371 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 63 273 7.9E-14 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VSVS12_01326 c1d9d71d2dda7b40756985faf5fc1bef 371 SUPERFAMILY SSF111369 62 223 1.01E-23 T 11-10-2018 VSVS12_01326 c1d9d71d2dda7b40756985faf5fc1bef 371 Gene3D G3DSA:2.40.30.170 57 281 9.1E-78 T 11-10-2018 VSVS12_01326 c1d9d71d2dda7b40756985faf5fc1bef 371 Gene3D G3DSA:2.40.50.100 71 204 9.1E-78 T 11-10-2018 VSVS12_01326 c1d9d71d2dda7b40756985faf5fc1bef 371 Gene3D G3DSA:1.10.287.470 105 164 9.1E-78 T 11-10-2018 VSVS12_01326 c1d9d71d2dda7b40756985faf5fc1bef 371 Gene3D G3DSA:2.40.420.20 50 357 9.1E-78 T 11-10-2018 VSVS12_01284 00a632d5d3714c61c9f043136505e46d 435 Pfam PF00425 chorismate binding enzyme 164 417 7.0E-72 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal VSVS12_01284 00a632d5d3714c61c9f043136505e46d 435 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 85 424 4.7E-103 T 11-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 VSVS12_01284 00a632d5d3714c61c9f043136505e46d 435 Hamap MF_01935 Isochorismate synthase MenF [menF]. 3 427 31.314 T 11-10-2018 IPR034681 Isochorismate synthase MenF GO:0008909|GO:0009234 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 VSVS12_01284 00a632d5d3714c61c9f043136505e46d 435 SUPERFAMILY SSF56322 24 425 7.06E-99 T 11-10-2018 IPR005801 ADC synthase GO:0009058 VSVS12_01284 00a632d5d3714c61c9f043136505e46d 435 Gene3D G3DSA:3.60.120.10 1 429 3.0E-128 T 11-10-2018 IPR005801 ADC synthase GO:0009058 VSVS12_02465 f3e4bcaa0c697c0aa8988e9df1270bbf 1045 Gene3D G3DSA:3.30.2090.10 178 269 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VSVS12_02465 f3e4bcaa0c697c0aa8988e9df1270bbf 1045 Gene3D G3DSA:3.30.70.1430 556 654 0.0 T 11-10-2018 VSVS12_02465 f3e4bcaa0c697c0aa8988e9df1270bbf 1045 SUPERFAMILY SSF82866 791 1009 2.88E-49 T 11-10-2018 VSVS12_02465 f3e4bcaa0c697c0aa8988e9df1270bbf 1045 SUPERFAMILY SSF82693 554 657 4.6E-15 T 11-10-2018 VSVS12_02465 f3e4bcaa0c697c0aa8988e9df1270bbf 1045 SUPERFAMILY SSF82693 139 324 5.23E-18 T 11-10-2018 VSVS12_02465 f3e4bcaa0c697c0aa8988e9df1270bbf 1045 Gene3D G3DSA:1.20.1640.10 10 501 0.0 T 11-10-2018 VSVS12_02465 f3e4bcaa0c697c0aa8988e9df1270bbf 1045 SUPERFAMILY SSF82693 40 134 7.59E-26 T 11-10-2018 VSVS12_02465 f3e4bcaa0c697c0aa8988e9df1270bbf 1045 Gene3D G3DSA:1.20.1640.10 502 1005 0.0 T 11-10-2018 VSVS12_02465 f3e4bcaa0c697c0aa8988e9df1270bbf 1045 Gene3D G3DSA:3.30.70.1320 134 326 0.0 T 11-10-2018 VSVS12_02465 f3e4bcaa0c697c0aa8988e9df1270bbf 1045 PRINTS PR00702 Acriflavin resistance protein family signature 611 625 3.5E-71 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_02465 f3e4bcaa0c697c0aa8988e9df1270bbf 1045 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 3.5E-71 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_02465 f3e4bcaa0c697c0aa8988e9df1270bbf 1045 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 3.5E-71 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_02465 f3e4bcaa0c697c0aa8988e9df1270bbf 1045 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 3.5E-71 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_02465 f3e4bcaa0c697c0aa8988e9df1270bbf 1045 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 3.5E-71 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_02465 f3e4bcaa0c697c0aa8988e9df1270bbf 1045 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 3.5E-71 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_02465 f3e4bcaa0c697c0aa8988e9df1270bbf 1045 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 3.5E-71 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_02465 f3e4bcaa0c697c0aa8988e9df1270bbf 1045 PRINTS PR00702 Acriflavin resistance protein family signature 541 558 3.5E-71 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_02465 f3e4bcaa0c697c0aa8988e9df1270bbf 1045 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 3.5E-71 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_02465 f3e4bcaa0c697c0aa8988e9df1270bbf 1045 Gene3D G3DSA:3.30.70.1440 655 848 0.0 T 11-10-2018 VSVS12_02465 f3e4bcaa0c697c0aa8988e9df1270bbf 1045 SUPERFAMILY SSF82714 704 788 8.76E-16 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VSVS12_02465 f3e4bcaa0c697c0aa8988e9df1270bbf 1045 Gene3D G3DSA:3.30.70.1430 40 799 0.0 T 11-10-2018 VSVS12_02465 f3e4bcaa0c697c0aa8988e9df1270bbf 1045 SUPERFAMILY SSF82866 291 489 1.57E-44 T 11-10-2018 VSVS12_02465 f3e4bcaa0c697c0aa8988e9df1270bbf 1045 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 1.2E-280 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_02465 f3e4bcaa0c697c0aa8988e9df1270bbf 1045 Gene3D G3DSA:3.30.2090.10 703 791 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VSVS12_02465 f3e4bcaa0c697c0aa8988e9df1270bbf 1045 SUPERFAMILY SSF82714 183 266 3.66E-15 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VSVS12_03429 10367d877878dedb1ee7283ea4829b45 312 SUPERFAMILY SSF46689 209 255 4.3E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_03429 10367d877878dedb1ee7283ea4829b45 312 Pfam PF01965 DJ-1/PfpI family 2 168 3.8E-11 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 VSVS12_03429 10367d877878dedb1ee7283ea4829b45 312 SUPERFAMILY SSF52317 1 189 7.2E-40 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like VSVS12_03429 10367d877878dedb1ee7283ea4829b45 312 Pfam PF12833 Helix-turn-helix domain 228 306 6.2E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VSVS12_03429 10367d877878dedb1ee7283ea4829b45 312 Gene3D G3DSA:1.10.10.60 206 311 4.4E-25 T 11-10-2018 VSVS12_03429 10367d877878dedb1ee7283ea4829b45 312 SUPERFAMILY SSF46689 259 308 2.33E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_03429 10367d877878dedb1ee7283ea4829b45 312 Gene3D G3DSA:3.40.50.880 1 203 1.1E-45 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like VSVS12_03429 10367d877878dedb1ee7283ea4829b45 312 SMART SM00342 222 305 9.2E-24 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VSVS12_02166 90d612cccf141a6eff10aa520edbcca9 106 Gene3D G3DSA:3.30.1390.10 1 106 7.3E-45 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VSVS12_02166 90d612cccf141a6eff10aa520edbcca9 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 8 101 27.848 T 11-10-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS VSVS12_02166 90d612cccf141a6eff10aa520edbcca9 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 23 102 2.2E-33 T 11-10-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 VSVS12_02166 90d612cccf141a6eff10aa520edbcca9 106 SUPERFAMILY SSF54736 21 105 1.36E-32 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VSVS12_03358 b9a4b8e12ab342ccc8e985336c7361dd 402 Pfam PF07670 Nucleoside recognition 90 185 1.1E-6 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VSVS12_03358 b9a4b8e12ab342ccc8e985336c7361dd 402 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 9 81 3.1E-23 T 11-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 VSVS12_03358 b9a4b8e12ab342ccc8e985336c7361dd 402 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 399 4.2E-135 T 11-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 VSVS12_03358 b9a4b8e12ab342ccc8e985336c7361dd 402 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 192 399 8.1E-71 T 11-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 VSVS12_04280 472cd85c239665693076c0406409beac 348 SUPERFAMILY SSF50494 9 276 3.35E-47 T 11-10-2018 IPR009003 Peptidase S1, PA clan VSVS12_04280 472cd85c239665693076c0406409beac 348 Gene3D G3DSA:2.40.10.10 17 276 1.7E-43 T 11-10-2018 VSVS12_04280 472cd85c239665693076c0406409beac 348 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 57 72 2.1E-11 T 11-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VSVS12_04280 472cd85c239665693076c0406409beac 348 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 118 132 2.1E-11 T 11-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VSVS12_04280 472cd85c239665693076c0406409beac 348 PRINTS PR00722 Chymotrypsin serine protease family (S1) signature 216 228 2.1E-11 T 11-10-2018 IPR001314 Peptidase S1A, chymotrypsin family GO:0004252|GO:0006508 VSVS12_04280 472cd85c239665693076c0406409beac 348 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 67 72 - T 11-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 VSVS12_04280 472cd85c239665693076c0406409beac 348 Pfam PF00089 Trypsin 25 271 2.8E-29 T 11-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VSVS12_04280 472cd85c239665693076c0406409beac 348 SMART SM00020 24 271 3.2E-26 T 11-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VSVS12_04280 472cd85c239665693076c0406409beac 348 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 217 228 - T 11-10-2018 IPR033116 Serine proteases, trypsin family, serine active site VSVS12_02224 e2b6c702ec22e09803c4a9d165aece6a 181 Gene3D G3DSA:3.40.50.2020 1 181 7.0E-67 T 11-10-2018 VSVS12_02224 e2b6c702ec22e09803c4a9d165aece6a 181 Pfam PF00156 Phosphoribosyl transferase domain 30 155 1.7E-14 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 VSVS12_02224 e2b6c702ec22e09803c4a9d165aece6a 181 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 9 178 37.778 T 11-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 VSVS12_02224 e2b6c702ec22e09803c4a9d165aece6a 181 SUPERFAMILY SSF53271 10 178 6.08E-52 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like VSVS12_02224 e2b6c702ec22e09803c4a9d165aece6a 181 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 9 177 5.1E-73 T 11-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 VSVS12_04300 238b5a94fe9d72cfbcf4c8c19346d84e 290 Gene3D G3DSA:3.40.190.290 92 288 4.4E-70 T 11-10-2018 VSVS12_04300 238b5a94fe9d72cfbcf4c8c19346d84e 290 SUPERFAMILY SSF46785 8 86 2.08E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_04300 238b5a94fe9d72cfbcf4c8c19346d84e 290 Gene3D G3DSA:1.10.10.10 4 91 8.1E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_04300 238b5a94fe9d72cfbcf4c8c19346d84e 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 63 7.5E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_04300 238b5a94fe9d72cfbcf4c8c19346d84e 290 SUPERFAMILY SSF53850 90 289 8.32E-48 T 11-10-2018 VSVS12_04300 238b5a94fe9d72cfbcf4c8c19346d84e 290 Pfam PF03466 LysR substrate binding domain 89 288 5.2E-47 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_00188 51e5c4f3c914c899228566b796d9b498 513 Gene3D G3DSA:1.20.150.20 383 513 7.8E-48 T 11-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VSVS12_00188 51e5c4f3c914c899228566b796d9b498 513 SUPERFAMILY SSF52540 96 381 7.31E-94 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00188 51e5c4f3c914c899228566b796d9b498 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 6.5E-251 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VSVS12_00188 51e5c4f3c914c899228566b796d9b498 513 SUPERFAMILY SSF50615 10 94 1.1E-25 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VSVS12_00188 51e5c4f3c914c899228566b796d9b498 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 49.62 T 11-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VSVS12_00188 51e5c4f3c914c899228566b796d9b498 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VSVS12_00188 51e5c4f3c914c899228566b796d9b498 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 2.3E-71 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VSVS12_00188 51e5c4f3c914c899228566b796d9b498 513 SUPERFAMILY SSF47917 383 511 2.62E-45 T 11-10-2018 VSVS12_00188 51e5c4f3c914c899228566b796d9b498 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 92 5.8E-14 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VSVS12_00188 51e5c4f3c914c899228566b796d9b498 513 Gene3D G3DSA:2.40.30.20 1 93 1.4E-29 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VSVS12_00188 51e5c4f3c914c899228566b796d9b498 513 Gene3D G3DSA:3.40.50.300 94 382 2.2E-129 T 11-10-2018 VSVS12_00188 51e5c4f3c914c899228566b796d9b498 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 5.1E-44 T 11-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VSVS12_03665 e77e4f7e5ca33651fd9f361327883571 543 SMART SM00304 212 266 5.2E-13 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_03665 e77e4f7e5ca33651fd9f361327883571 543 Gene3D G3DSA:1.10.287.950 212 543 1.1E-72 T 11-10-2018 VSVS12_03665 e77e4f7e5ca33651fd9f361327883571 543 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 325 507 7.7E-45 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_03665 e77e4f7e5ca33651fd9f361327883571 543 SMART SM00283 281 542 2.3E-80 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_03665 e77e4f7e5ca33651fd9f361327883571 543 SUPERFAMILY SSF58104 234 543 1.83E-75 T 11-10-2018 VSVS12_03665 e77e4f7e5ca33651fd9f361327883571 543 Pfam PF00672 HAMP domain 212 262 5.8E-11 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_02958 7cb6ab0aec8b03cb1b33d34023cbab47 169 Pfam PF02308 MgtC family 19 141 3.9E-28 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VSVS12_02958 7cb6ab0aec8b03cb1b33d34023cbab47 169 PRINTS PR01837 MgtC/SapB protein signature 22 41 1.0E-30 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VSVS12_02958 7cb6ab0aec8b03cb1b33d34023cbab47 169 PRINTS PR01837 MgtC/SapB protein signature 68 90 1.0E-30 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VSVS12_02958 7cb6ab0aec8b03cb1b33d34023cbab47 169 PRINTS PR01837 MgtC/SapB protein signature 95 119 1.0E-30 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VSVS12_02958 7cb6ab0aec8b03cb1b33d34023cbab47 169 PRINTS PR01837 MgtC/SapB protein signature 41 59 1.0E-30 T 11-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 VSVS12_01381 fc8328a5baf729906457d44fc1cf0c22 255 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 7 248 1.2E-82 T 11-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 VSVS12_01381 fc8328a5baf729906457d44fc1cf0c22 255 SMART SM00062 26 251 1.1E-71 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VSVS12_01381 fc8328a5baf729906457d44fc1cf0c22 255 Gene3D G3DSA:3.40.190.10 30 248 3.0E-73 T 11-10-2018 VSVS12_01381 fc8328a5baf729906457d44fc1cf0c22 255 SUPERFAMILY SSF53850 1 252 9.06E-72 T 11-10-2018 VSVS12_01381 fc8328a5baf729906457d44fc1cf0c22 255 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 249 4.8E-62 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VSVS12_01381 fc8328a5baf729906457d44fc1cf0c22 255 Gene3D G3DSA:3.40.190.10 112 207 3.0E-73 T 11-10-2018 VSVS12_01381 fc8328a5baf729906457d44fc1cf0c22 255 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 49 62 - T 11-10-2018 IPR018313 Solute-binding protein family 3, conserved site VSVS12_01381 fc8328a5baf729906457d44fc1cf0c22 255 SMART SM00079 26 250 1.9E-4 T 11-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 VSVS12_02868 c0dcc19e66e4e692a6a0c59d93a82d96 209 Gene3D G3DSA:3.30.1060.10 3 208 3.3E-87 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VSVS12_02868 c0dcc19e66e4e692a6a0c59d93a82d96 209 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 44 194 2.5E-65 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VSVS12_02868 c0dcc19e66e4e692a6a0c59d93a82d96 209 Pfam PF01625 Peptide methionine sulfoxide reductase 45 194 1.5E-65 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VSVS12_02868 c0dcc19e66e4e692a6a0c59d93a82d96 209 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 42 200 37.719 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VSVS12_02868 c0dcc19e66e4e692a6a0c59d93a82d96 209 SUPERFAMILY SSF55068 4 204 1.57E-77 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VSVS12_00315 305a50feeb5c776a1ceca64a1696b002 706 Gene3D G3DSA:3.10.20.30 382 456 2.9E-29 T 11-10-2018 IPR012675 Beta-grasp domain superfamily VSVS12_00315 305a50feeb5c776a1ceca64a1696b002 706 Gene3D G3DSA:3.30.70.260 627 706 2.0E-14 T 11-10-2018 VSVS12_00315 305a50feeb5c776a1ceca64a1696b002 706 Gene3D G3DSA:1.10.3210.10 3 190 4.9E-79 T 11-10-2018 VSVS12_00315 305a50feeb5c776a1ceca64a1696b002 706 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 2.0E-34 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 VSVS12_00315 305a50feeb5c776a1ceca64a1696b002 706 Gene3D G3DSA:3.30.460.10 193 325 4.8E-46 T 11-10-2018 VSVS12_00315 305a50feeb5c776a1ceca64a1696b002 706 SMART SM00954 235 345 2.3E-59 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 VSVS12_00315 305a50feeb5c776a1ceca64a1696b002 706 Pfam PF13328 HD domain 28 175 1.0E-52 T 11-10-2018 IPR003607 HD/PDEase domain VSVS12_00315 305a50feeb5c776a1ceca64a1696b002 706 SUPERFAMILY SSF81301 180 393 2.62E-59 T 11-10-2018 VSVS12_00315 305a50feeb5c776a1ceca64a1696b002 706 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 27 702 1.2E-269 T 11-10-2018 IPR004811 RelA/SpoT family GO:0015969 VSVS12_00315 305a50feeb5c776a1ceca64a1696b002 706 SUPERFAMILY SSF109604 3 190 7.85E-74 T 11-10-2018 VSVS12_00315 305a50feeb5c776a1ceca64a1696b002 706 SUPERFAMILY SSF55021 633 703 2.98E-9 T 11-10-2018 VSVS12_00315 305a50feeb5c776a1ceca64a1696b002 706 Pfam PF13291 ACT domain 627 703 4.7E-15 T 11-10-2018 IPR002912 ACT domain VSVS12_00315 305a50feeb5c776a1ceca64a1696b002 706 SUPERFAMILY SSF81271 376 448 2.13E-20 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VSVS12_00315 305a50feeb5c776a1ceca64a1696b002 706 Pfam PF02824 TGS domain 389 447 4.0E-19 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 VSVS12_00315 305a50feeb5c776a1ceca64a1696b002 706 SMART SM00471 41 153 3.2E-10 T 11-10-2018 IPR003607 HD/PDEase domain VSVS12_03941 7c186999aca09697ca1670d34b948cb6 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 614 627 1.7E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_03941 7c186999aca09697ca1670d34b948cb6 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 590 608 1.7E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_03941 7c186999aca09697ca1670d34b948cb6 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 555 569 1.7E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_03941 7c186999aca09697ca1670d34b948cb6 646 PRINTS PR00344 Bacterial sensor protein C-terminal signature 573 583 1.7E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_03941 7c186999aca09697ca1670d34b948cb6 646 SMART SM00388 394 459 8.8E-26 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_03941 7c186999aca09697ca1670d34b948cb6 646 Pfam PF00512 His Kinase A (phospho-acceptor) domain 394 459 7.1E-21 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_03941 7c186999aca09697ca1670d34b948cb6 646 SMART SM00387 506 630 1.2E-35 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_03941 7c186999aca09697ca1670d34b948cb6 646 Gene3D G3DSA:1.10.287.130 358 457 3.3E-30 T 11-10-2018 VSVS12_03941 7c186999aca09697ca1670d34b948cb6 646 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 507 628 6.8E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_03941 7c186999aca09697ca1670d34b948cb6 646 Gene3D G3DSA:3.30.565.10 458 633 5.5E-51 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_03941 7c186999aca09697ca1670d34b948cb6 646 SUPERFAMILY SSF55874 448 626 3.54E-43 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_03941 7c186999aca09697ca1670d34b948cb6 646 SUPERFAMILY SSF47384 382 459 1.18E-21 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VSVS12_00710 5580cfc543a605f54c5f68b1efb05f18 1134 SMART SM00387 579 690 6.1E-38 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_00710 5580cfc543a605f54c5f68b1efb05f18 1134 SUPERFAMILY SSF158472 385 434 3.14E-10 T 11-10-2018 VSVS12_00710 5580cfc543a605f54c5f68b1efb05f18 1134 Pfam PF00072 Response regulator receiver domain 731 841 3.5E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_00710 5580cfc543a605f54c5f68b1efb05f18 1134 Pfam PF00512 His Kinase A (phospho-acceptor) domain 466 531 6.3E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_00710 5580cfc543a605f54c5f68b1efb05f18 1134 SUPERFAMILY SSF55785 866 940 2.44E-9 T 11-10-2018 IPR035965 PAS domain superfamily VSVS12_00710 5580cfc543a605f54c5f68b1efb05f18 1134 Pfam PF13188 PAS domain 885 932 1.9E-5 T 11-10-2018 IPR000014 PAS domain VSVS12_00710 5580cfc543a605f54c5f68b1efb05f18 1134 SUPERFAMILY SSF47384 452 534 1.35E-18 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VSVS12_00710 5580cfc543a605f54c5f68b1efb05f18 1134 Gene3D G3DSA:1.20.1480.50 345 442 9.5E-24 T 11-10-2018 VSVS12_00710 5580cfc543a605f54c5f68b1efb05f18 1134 Gene3D G3DSA:1.10.287.130 451 533 2.6E-20 T 11-10-2018 VSVS12_00710 5580cfc543a605f54c5f68b1efb05f18 1134 PRINTS PR00344 Bacterial sensor protein C-terminal signature 674 687 1.0E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_00710 5580cfc543a605f54c5f68b1efb05f18 1134 PRINTS PR00344 Bacterial sensor protein C-terminal signature 633 643 1.0E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_00710 5580cfc543a605f54c5f68b1efb05f18 1134 PRINTS PR00344 Bacterial sensor protein C-terminal signature 650 668 1.0E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_00710 5580cfc543a605f54c5f68b1efb05f18 1134 PRINTS PR00344 Bacterial sensor protein C-terminal signature 615 629 1.0E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_00710 5580cfc543a605f54c5f68b1efb05f18 1134 Gene3D G3DSA:3.30.565.10 534 694 7.0E-44 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_00710 5580cfc543a605f54c5f68b1efb05f18 1134 Pfam PF00672 HAMP domain 386 433 4.5E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_00710 5580cfc543a605f54c5f68b1efb05f18 1134 SMART SM00091 879 944 5.7E-4 T 11-10-2018 IPR000014 PAS domain VSVS12_00710 5580cfc543a605f54c5f68b1efb05f18 1134 Gene3D G3DSA:3.40.50.2300 728 868 3.4E-40 T 11-10-2018 VSVS12_00710 5580cfc543a605f54c5f68b1efb05f18 1134 Gene3D G3DSA:3.30.450.20 869 963 1.1E-8 T 11-10-2018 VSVS12_00710 5580cfc543a605f54c5f68b1efb05f18 1134 SUPERFAMILY SSF55874 522 689 9.04E-46 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_00710 5580cfc543a605f54c5f68b1efb05f18 1134 SMART SM00448 728 841 6.1E-44 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_00710 5580cfc543a605f54c5f68b1efb05f18 1134 SUPERFAMILY SSF52172 724 852 3.98E-41 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_00710 5580cfc543a605f54c5f68b1efb05f18 1134 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 580 688 2.7E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_00710 5580cfc543a605f54c5f68b1efb05f18 1134 SMART SM00388 465 533 4.6E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_00710 5580cfc543a605f54c5f68b1efb05f18 1134 SMART SM00304 384 436 1.6E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_04262 700228ea276c0275227a6abb89cecc58 119 Pfam PF13417 Glutathione S-transferase, N-terminal domain 43 118 2.2E-11 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VSVS12_04262 700228ea276c0275227a6abb89cecc58 119 SUPERFAMILY SSF52833 40 118 8.46E-19 T 11-10-2018 IPR036249 Thioredoxin-like superfamily VSVS12_04262 700228ea276c0275227a6abb89cecc58 119 Gene3D G3DSA:3.40.30.10 21 118 2.8E-15 T 11-10-2018 VSVS12_02648 1aec58d2e75efde544cdfe98f02fe0bf 326 Pfam PF01926 50S ribosome-binding GTPase 35 149 9.1E-24 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 VSVS12_02648 1aec58d2e75efde544cdfe98f02fe0bf 326 Pfam PF07650 KH domain 233 310 4.9E-21 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_02648 1aec58d2e75efde544cdfe98f02fe0bf 326 Gene3D G3DSA:3.40.50.300 27 208 1.5E-51 T 11-10-2018 VSVS12_02648 1aec58d2e75efde544cdfe98f02fe0bf 326 SUPERFAMILY SSF52540 35 230 3.51E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02648 1aec58d2e75efde544cdfe98f02fe0bf 326 Hamap MF_00367 GTPase Era [era]. 30 322 35.917 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02648 1aec58d2e75efde544cdfe98f02fe0bf 326 Gene3D G3DSA:3.30.300.20 210 324 3.2E-42 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta VSVS12_02648 1aec58d2e75efde544cdfe98f02fe0bf 326 TIGRFAM TIGR00436 era: GTP-binding protein Era 33 305 2.5E-109 T 11-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02648 1aec58d2e75efde544cdfe98f02fe0bf 326 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 32 194 9.1E-38 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VSVS12_02648 1aec58d2e75efde544cdfe98f02fe0bf 326 SUPERFAMILY SSF54814 206 322 2.81E-41 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 VSVS12_00615 0bcff30a50e39c6f57041286952417a0 406 TIGRFAM TIGR01078 arcA: arginine deiminase 4 406 3.2E-166 T 11-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VSVS12_00615 0bcff30a50e39c6f57041286952417a0 406 Hamap MF_00242 Arginine deiminase [arcA]. 1 406 44.227 T 11-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VSVS12_00615 0bcff30a50e39c6f57041286952417a0 406 SUPERFAMILY SSF55909 3 406 2.94E-126 T 11-10-2018 VSVS12_00615 0bcff30a50e39c6f57041286952417a0 406 Pfam PF02274 Amidinotransferase 19 403 9.2E-108 T 11-10-2018 VSVS12_00615 0bcff30a50e39c6f57041286952417a0 406 PIRSF PIRSF006356 1 406 1.7E-153 T 11-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VSVS12_00615 0bcff30a50e39c6f57041286952417a0 406 Gene3D G3DSA:3.75.10.10 6 403 2.8E-145 T 11-10-2018 VSVS12_00615 0bcff30a50e39c6f57041286952417a0 406 PRINTS PR01466 Bacterial arginine deiminase signature 2 22 4.9E-44 T 11-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VSVS12_00615 0bcff30a50e39c6f57041286952417a0 406 PRINTS PR01466 Bacterial arginine deiminase signature 362 376 4.9E-44 T 11-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VSVS12_00615 0bcff30a50e39c6f57041286952417a0 406 PRINTS PR01466 Bacterial arginine deiminase signature 385 403 4.9E-44 T 11-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VSVS12_00615 0bcff30a50e39c6f57041286952417a0 406 PRINTS PR01466 Bacterial arginine deiminase signature 149 167 4.9E-44 T 11-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VSVS12_00615 0bcff30a50e39c6f57041286952417a0 406 PRINTS PR01466 Bacterial arginine deiminase signature 177 192 4.9E-44 T 11-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VSVS12_00615 0bcff30a50e39c6f57041286952417a0 406 PRINTS PR01466 Bacterial arginine deiminase signature 342 359 4.9E-44 T 11-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 VSVS12_00615 0bcff30a50e39c6f57041286952417a0 406 Gene3D G3DSA:1.10.3930.10 68 148 2.8E-145 T 11-10-2018 VSVS12_02710 925165d44c145cc21d4212630bfb4d23 66 Pfam PF13488 Glycine zipper 27 64 7.9E-8 T 11-10-2018 IPR039567 Glycine zipper domain VSVS12_02710 925165d44c145cc21d4212630bfb4d23 66 Pfam PF10439 Bacteriocin class II with double-glycine leader peptide 24 62 1.2E-6 T 11-10-2018 IPR019493 Bacteriocin, class IIb, lactacin-related GO:0042742 VSVS12_00961 e5bab6210d75626f4d57b7ebbb4c6541 474 SUPERFAMILY SSF52374 3 301 3.49E-108 T 11-10-2018 VSVS12_00961 e5bab6210d75626f4d57b7ebbb4c6541 474 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 464 32.007 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 VSVS12_00961 e5bab6210d75626f4d57b7ebbb4c6541 474 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VSVS12_00961 e5bab6210d75626f4d57b7ebbb4c6541 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 198 206 9.7E-28 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VSVS12_00961 e5bab6210d75626f4d57b7ebbb4c6541 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 182 192 9.7E-28 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VSVS12_00961 e5bab6210d75626f4d57b7ebbb4c6541 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 9.7E-28 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VSVS12_00961 e5bab6210d75626f4d57b7ebbb4c6541 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 9.7E-28 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VSVS12_00961 e5bab6210d75626f4d57b7ebbb4c6541 474 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 9.7E-28 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VSVS12_00961 e5bab6210d75626f4d57b7ebbb4c6541 474 Gene3D G3DSA:3.40.50.620 2 317 3.8E-133 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VSVS12_00961 e5bab6210d75626f4d57b7ebbb4c6541 474 SUPERFAMILY SSF48163 302 464 4.84E-46 T 11-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 VSVS12_00961 e5bab6210d75626f4d57b7ebbb4c6541 474 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 3 308 1.1E-114 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 VSVS12_00961 e5bab6210d75626f4d57b7ebbb4c6541 474 Gene3D G3DSA:1.10.10.350 369 472 1.5E-24 T 11-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 VSVS12_00961 e5bab6210d75626f4d57b7ebbb4c6541 474 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 3 465 5.8E-196 T 11-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 VSVS12_04389 d3ee9d15a592e543e54801b80354ed19 369 Pfam PF13416 Bacterial extracellular solute-binding protein 60 335 1.3E-31 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein VSVS12_04389 d3ee9d15a592e543e54801b80354ed19 369 SUPERFAMILY SSF53850 41 334 1.93E-41 T 11-10-2018 VSVS12_04389 d3ee9d15a592e543e54801b80354ed19 369 Gene3D G3DSA:3.40.190.10 150 344 2.9E-27 T 11-10-2018 VSVS12_04389 d3ee9d15a592e543e54801b80354ed19 369 Gene3D G3DSA:3.40.190.10 56 341 2.9E-27 T 11-10-2018 VSVS12_03088 3e3ca2ead65e0105bfc8c62d8ffa04eb 817 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 656 668 - T 11-10-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 VSVS12_03088 3e3ca2ead65e0105bfc8c62d8ffa04eb 817 PIRSF PIRSF000460 2 817 3.1E-214 T 11-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 VSVS12_03088 3e3ca2ead65e0105bfc8c62d8ffa04eb 817 SUPERFAMILY SSF53756 7 815 0.0 T 11-10-2018 VSVS12_03088 3e3ca2ead65e0105bfc8c62d8ffa04eb 817 Pfam PF00343 Carbohydrate phosphorylase 99 812 0.0 T 11-10-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 VSVS12_03088 3e3ca2ead65e0105bfc8c62d8ffa04eb 817 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 11 812 0.0 T 11-10-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 VSVS12_03088 3e3ca2ead65e0105bfc8c62d8ffa04eb 817 Gene3D G3DSA:3.40.50.2000 475 797 6.4E-143 T 11-10-2018 VSVS12_03088 3e3ca2ead65e0105bfc8c62d8ffa04eb 817 Gene3D G3DSA:3.40.50.2000 5 474 5.6E-193 T 11-10-2018 VSVS12_01475 1c5fa34e4d84a8fdcee4c0d1c65de447 539 Gene3D G3DSA:3.40.1080.10 1 264 6.5E-95 T 11-10-2018 VSVS12_01475 1c5fa34e4d84a8fdcee4c0d1c65de447 539 SUPERFAMILY SSF100950 2 258 3.67E-82 T 11-10-2018 IPR037171 NagB/RpiA transferase-like VSVS12_01475 1c5fa34e4d84a8fdcee4c0d1c65de447 539 Pfam PF01144 Coenzyme A transferase 7 241 7.3E-30 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 VSVS12_01475 1c5fa34e4d84a8fdcee4c0d1c65de447 539 Gene3D G3DSA:3.40.1080.10 278 526 4.0E-106 T 11-10-2018 VSVS12_01475 1c5fa34e4d84a8fdcee4c0d1c65de447 539 SUPERFAMILY SSF100950 279 520 2.21E-73 T 11-10-2018 IPR037171 NagB/RpiA transferase-like VSVS12_01475 1c5fa34e4d84a8fdcee4c0d1c65de447 539 PIRSF PIRSF000858 1 525 6.1E-206 T 11-10-2018 IPR014388 3-oxoacid CoA-transferase GO:0008410|GO:0046952 Reactome: R-HSA-77108 VSVS12_01475 1c5fa34e4d84a8fdcee4c0d1c65de447 539 SMART SM00882 5 242 2.7E-54 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 VSVS12_01475 1c5fa34e4d84a8fdcee4c0d1c65de447 539 SMART SM00882 284 492 7.4E-5 T 11-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 VSVS12_02696 755327a60656d073f33b1dd8dd67e5d5 218 SUPERFAMILY SSF50324 35 217 2.49E-46 T 11-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 VSVS12_02696 755327a60656d073f33b1dd8dd67e5d5 218 Pfam PF00719 Inorganic pyrophosphatase 52 217 1.3E-39 T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 VSVS12_02696 755327a60656d073f33b1dd8dd67e5d5 218 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 110 116 - T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 VSVS12_02696 755327a60656d073f33b1dd8dd67e5d5 218 Gene3D G3DSA:3.90.80.10 28 218 1.4E-49 T 11-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 VSVS12_03195 fe299adcf147d7f5caddaa0132183f59 99 Gene3D G3DSA:3.30.750.24 3 99 4.0E-17 T 11-10-2018 IPR036513 STAS domain superfamily VSVS12_03195 fe299adcf147d7f5caddaa0132183f59 99 SUPERFAMILY SSF52091 6 98 3.92E-18 T 11-10-2018 IPR036513 STAS domain superfamily VSVS12_03195 fe299adcf147d7f5caddaa0132183f59 99 Pfam PF01740 STAS domain 14 96 2.2E-9 T 11-10-2018 IPR002645 STAS domain VSVS12_02460 693f8b06b55ce17dbbc684899c1a6ce9 1206 Gene3D G3DSA:3.90.320.10 898 1195 2.0E-102 T 11-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal VSVS12_02460 693f8b06b55ce17dbbc684899c1a6ce9 1206 Gene3D G3DSA:3.40.50.300 10 437 7.7E-160 T 11-10-2018 VSVS12_02460 693f8b06b55ce17dbbc684899c1a6ce9 1206 Gene3D G3DSA:3.40.50.300 446 852 4.9E-157 T 11-10-2018 VSVS12_02460 693f8b06b55ce17dbbc684899c1a6ce9 1206 Gene3D G3DSA:1.10.3170.10 158 350 7.7E-160 T 11-10-2018 VSVS12_02460 693f8b06b55ce17dbbc684899c1a6ce9 1206 SUPERFAMILY SSF52540 16 849 1.85E-108 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02460 693f8b06b55ce17dbbc684899c1a6ce9 1206 Pfam PF00580 UvrD/REP helicase N-terminal domain 17 437 5.5E-60 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 VSVS12_02460 693f8b06b55ce17dbbc684899c1a6ce9 1206 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 10 1187 0.0 T 11-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 VSVS12_02460 693f8b06b55ce17dbbc684899c1a6ce9 1206 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 8 1188 22.922 T 11-10-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 VSVS12_02460 693f8b06b55ce17dbbc684899c1a6ce9 1206 Pfam PF13361 UvrD-like helicase C-terminal domain 444 816 1.1E-17 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VSVS12_02460 693f8b06b55ce17dbbc684899c1a6ce9 1206 Gene3D G3DSA:1.10.486.10 587 735 4.9E-157 T 11-10-2018 VSVS12_02460 693f8b06b55ce17dbbc684899c1a6ce9 1206 Pfam PF12705 PD-(D/E)XK nuclease superfamily 963 1160 4.3E-7 T 11-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type VSVS12_02460 693f8b06b55ce17dbbc684899c1a6ce9 1206 SUPERFAMILY SSF52980 908 1189 1.82E-83 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VSVS12_01583 d591c65f88bc1ea6a98451afdf2e80b0 510 SUPERFAMILY SSF48557 4 498 1.41E-192 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 VSVS12_01583 d591c65f88bc1ea6a98451afdf2e80b0 510 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 504 44.333 T 11-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VSVS12_01583 d591c65f88bc1ea6a98451afdf2e80b0 510 Gene3D G3DSA:1.20.200.10 198 508 9.5E-125 T 11-10-2018 VSVS12_01583 d591c65f88bc1ea6a98451afdf2e80b0 510 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 11-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 VSVS12_01583 d591c65f88bc1ea6a98451afdf2e80b0 510 Gene3D G3DSA:1.10.275.10 2 197 1.4E-69 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal VSVS12_01583 d591c65f88bc1ea6a98451afdf2e80b0 510 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 5 501 1.4E-213 T 11-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VSVS12_01583 d591c65f88bc1ea6a98451afdf2e80b0 510 Pfam PF00221 Aromatic amino acid lyase 11 471 4.0E-188 T 11-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 VSVS12_01228 ff8731e35ab88ae751a85adb12896f62 572 Gene3D G3DSA:3.30.300.310 458 559 3.9E-30 T 11-10-2018 VSVS12_01228 ff8731e35ab88ae751a85adb12896f62 572 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 11-10-2018 IPR020845 AMP-binding, conserved site VSVS12_01228 ff8731e35ab88ae751a85adb12896f62 572 SUPERFAMILY SSF56801 13 553 2.62E-147 T 11-10-2018 VSVS12_01228 ff8731e35ab88ae751a85adb12896f62 572 Gene3D G3DSA:3.40.50.12780 10 457 7.4E-115 T 11-10-2018 VSVS12_01228 ff8731e35ab88ae751a85adb12896f62 572 Pfam PF00501 AMP-binding enzyme 29 461 5.0E-105 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VSVS12_01228 ff8731e35ab88ae751a85adb12896f62 572 Pfam PF13193 AMP-binding enzyme C-terminal domain 470 544 7.7E-17 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VSVS12_02579 0f9ac692746046df5b4949fb336eaa7f 421 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 295 396 1.2E-40 T 11-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 VSVS12_02579 0f9ac692746046df5b4949fb336eaa7f 421 SUPERFAMILY SSF81342 6 296 1.88E-92 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 VSVS12_02579 0f9ac692746046df5b4949fb336eaa7f 421 PIRSF PIRSF038885 1 421 1.6E-153 T 11-10-2018 IPR030689 Cytochrome b GO:0006122|GO:0008121|GO:0009055|GO:0045275 Reactome: R-HSA-611105 VSVS12_02579 0f9ac692746046df5b4949fb336eaa7f 421 SUPERFAMILY SSF81648 297 412 2.83E-33 T 11-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 VSVS12_02579 0f9ac692746046df5b4949fb336eaa7f 421 Gene3D G3DSA:1.20.810.10 1 421 4.4E-150 T 11-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 VSVS12_02579 0f9ac692746046df5b4949fb336eaa7f 421 Pfam PF00033 Cytochrome b/b6/petB 23 211 5.7E-66 T 11-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 VSVS12_01282 8c9f56f966bf7326163516694a3f27f0 194 Pfam PF13023 HD domain 11 156 2.2E-14 T 11-10-2018 IPR006674 HD domain VSVS12_01282 8c9f56f966bf7326163516694a3f27f0 194 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 80 176 8.0E-29 T 11-10-2018 VSVS12_01282 8c9f56f966bf7326163516694a3f27f0 194 Gene3D G3DSA:1.10.3210.10 1 194 2.9E-81 T 11-10-2018 VSVS12_01282 8c9f56f966bf7326163516694a3f27f0 194 SMART SM00471 26 151 2.3E-6 T 11-10-2018 IPR003607 HD/PDEase domain VSVS12_01282 8c9f56f966bf7326163516694a3f27f0 194 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 3 194 45.281 T 11-10-2018 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 VSVS12_01282 8c9f56f966bf7326163516694a3f27f0 194 SUPERFAMILY SSF109604 4 185 1.32E-43 T 11-10-2018 VSVS12_01783 ded442d1d9d777dadab5967df1cd0f5f 368 Gene3D G3DSA:3.40.50.2000 178 351 3.9E-55 T 11-10-2018 VSVS12_01783 ded442d1d9d777dadab5967df1cd0f5f 368 SUPERFAMILY SSF53756 15 337 7.63E-63 T 11-10-2018 VSVS12_01783 ded442d1d9d777dadab5967df1cd0f5f 368 Gene3D G3DSA:3.40.50.2000 24 361 3.9E-55 T 11-10-2018 VSVS12_01783 ded442d1d9d777dadab5967df1cd0f5f 368 Pfam PF13439 Glycosyltransferase Family 4 23 182 6.7E-17 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 VSVS12_01783 ded442d1d9d777dadab5967df1cd0f5f 368 Pfam PF00534 Glycosyl transferases group 1 192 337 3.6E-33 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 VSVS12_00743 95ae1ece314d5e2be3e8a4a6ecce4214 781 SUPERFAMILY SSF47384 269 347 6.67E-16 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VSVS12_00743 95ae1ece314d5e2be3e8a4a6ecce4214 781 SUPERFAMILY SSF47226 670 780 2.22E-28 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 VSVS12_00743 95ae1ece314d5e2be3e8a4a6ecce4214 781 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 507 8.8E-27 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_00743 95ae1ece314d5e2be3e8a4a6ecce4214 781 Gene3D G3DSA:1.10.287.970 1 89 6.6E-38 T 11-10-2018 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain superfamily VSVS12_00743 95ae1ece314d5e2be3e8a4a6ecce4214 781 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 345 2.2E-11 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_00743 95ae1ece314d5e2be3e8a4a6ecce4214 781 Pfam PF00072 Response regulator receiver domain 530 639 2.0E-17 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_00743 95ae1ece314d5e2be3e8a4a6ecce4214 781 Gene3D G3DSA:3.40.50.2300 513 645 2.6E-26 T 11-10-2018 VSVS12_00743 95ae1ece314d5e2be3e8a4a6ecce4214 781 SUPERFAMILY SSF55874 336 508 7.07E-40 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_00743 95ae1ece314d5e2be3e8a4a6ecce4214 781 SMART SM00448 528 639 9.9E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_00743 95ae1ece314d5e2be3e8a4a6ecce4214 781 Gene3D G3DSA:1.10.287.130 268 345 2.1E-20 T 11-10-2018 VSVS12_00743 95ae1ece314d5e2be3e8a4a6ecce4214 781 Gene3D G3DSA:3.30.450.20 150 267 6.3E-23 T 11-10-2018 VSVS12_00743 95ae1ece314d5e2be3e8a4a6ecce4214 781 PRINTS PR00344 Bacterial sensor protein C-terminal signature 434 448 2.1E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_00743 95ae1ece314d5e2be3e8a4a6ecce4214 781 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 488 2.1E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_00743 95ae1ece314d5e2be3e8a4a6ecce4214 781 PRINTS PR00344 Bacterial sensor protein C-terminal signature 494 507 2.1E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_00743 95ae1ece314d5e2be3e8a4a6ecce4214 781 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 462 2.1E-14 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_00743 95ae1ece314d5e2be3e8a4a6ecce4214 781 Gene3D G3DSA:1.20.120.160 663 781 3.4E-28 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 VSVS12_00743 95ae1ece314d5e2be3e8a4a6ecce4214 781 SUPERFAMILY SSF52172 527 647 2.56E-24 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_00743 95ae1ece314d5e2be3e8a4a6ecce4214 781 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 276 1.5E-19 T 11-10-2018 IPR000014 PAS domain VSVS12_00743 95ae1ece314d5e2be3e8a4a6ecce4214 781 SMART SM00388 282 347 9.9E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_00743 95ae1ece314d5e2be3e8a4a6ecce4214 781 SUPERFAMILY SSF55785 140 267 4.54E-25 T 11-10-2018 IPR035965 PAS domain superfamily VSVS12_00743 95ae1ece314d5e2be3e8a4a6ecce4214 781 Pfam PF08448 PAS fold 162 271 9.3E-16 T 11-10-2018 IPR013656 PAS fold-4 VSVS12_00743 95ae1ece314d5e2be3e8a4a6ecce4214 781 SMART SM00387 394 510 5.1E-34 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_00743 95ae1ece314d5e2be3e8a4a6ecce4214 781 SMART SM00091 155 221 1.1E-7 T 11-10-2018 IPR000014 PAS domain VSVS12_00743 95ae1ece314d5e2be3e8a4a6ecce4214 781 Gene3D G3DSA:3.30.565.10 348 512 1.1E-43 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_00743 95ae1ece314d5e2be3e8a4a6ecce4214 781 PIRSF PIRSF003182 1 781 0.0 T 11-10-2018 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 VSVS12_00743 95ae1ece314d5e2be3e8a4a6ecce4214 781 SMART SM00073 681 778 1.0E-6 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VSVS12_00743 95ae1ece314d5e2be3e8a4a6ecce4214 781 Pfam PF01627 Hpt domain 692 765 6.4E-12 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VSVS12_00285 c3a032cbfa1f174bea580dbd5eaa6983 542 SUPERFAMILY SSF53795 230 541 3.66E-127 T 11-10-2018 VSVS12_00285 c3a032cbfa1f174bea580dbd5eaa6983 542 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 266 281 - T 11-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 VSVS12_00285 c3a032cbfa1f174bea580dbd5eaa6983 542 PIRSF PIRSF006294 4 541 3.4E-226 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 VSVS12_00285 c3a032cbfa1f174bea580dbd5eaa6983 542 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 18 539 54.698 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 VSVS12_00285 c3a032cbfa1f174bea580dbd5eaa6983 542 SUPERFAMILY SSF68923 11 228 9.59E-88 T 11-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 VSVS12_00285 c3a032cbfa1f174bea580dbd5eaa6983 542 Pfam PF01293 Phosphoenolpyruvate carboxykinase 24 491 1.5E-210 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 VSVS12_00285 c3a032cbfa1f174bea580dbd5eaa6983 542 Gene3D G3DSA:3.40.449.10 25 235 4.8E-235 T 11-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 VSVS12_00285 c3a032cbfa1f174bea580dbd5eaa6983 542 Gene3D G3DSA:3.90.228.20 236 526 4.8E-235 T 11-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 VSVS12_00285 c3a032cbfa1f174bea580dbd5eaa6983 542 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 10 541 1.1E-276 T 11-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 VSVS12_00285 c3a032cbfa1f174bea580dbd5eaa6983 542 Gene3D G3DSA:2.170.8.10 49 351 4.8E-235 T 11-10-2018 VSVS12_03852 fba5c14c799520904affcc5b95fb2b8a 961 Gene3D G3DSA:1.20.120.160 853 960 1.6E-19 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 VSVS12_03852 fba5c14c799520904affcc5b95fb2b8a 961 SUPERFAMILY SSF55874 523 690 1.07E-46 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_03852 fba5c14c799520904affcc5b95fb2b8a 961 SMART SM00388 469 534 1.6E-22 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_03852 fba5c14c799520904affcc5b95fb2b8a 961 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 581 691 4.6E-31 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_03852 fba5c14c799520904affcc5b95fb2b8a 961 Gene3D G3DSA:1.20.58.920 47 179 3.7E-40 T 11-10-2018 IPR038188 TorS, sensor domain superfamily VSVS12_03852 fba5c14c799520904affcc5b95fb2b8a 961 Gene3D G3DSA:1.20.58.920 181 322 1.8E-49 T 11-10-2018 IPR038188 TorS, sensor domain superfamily VSVS12_03852 fba5c14c799520904affcc5b95fb2b8a 961 PIRSF PIRSF036437 1 960 0.0 T 11-10-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 VSVS12_03852 fba5c14c799520904affcc5b95fb2b8a 961 Gene3D G3DSA:1.10.287.130 411 532 1.3E-26 T 11-10-2018 VSVS12_03852 fba5c14c799520904affcc5b95fb2b8a 961 Pfam PF00072 Response regulator receiver domain 711 828 7.7E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_03852 fba5c14c799520904affcc5b95fb2b8a 961 SMART SM00387 581 692 1.0E-37 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_03852 fba5c14c799520904affcc5b95fb2b8a 961 SUPERFAMILY SSF47226 851 956 8.9E-20 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 VSVS12_03852 fba5c14c799520904affcc5b95fb2b8a 961 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 128 9.7E-7 T 11-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VSVS12_03852 fba5c14c799520904affcc5b95fb2b8a 961 SUPERFAMILY SSF52172 709 847 5.55E-34 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_03852 fba5c14c799520904affcc5b95fb2b8a 961 SUPERFAMILY SSF47384 457 535 1.0E-19 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VSVS12_03852 fba5c14c799520904affcc5b95fb2b8a 961 Pfam PF00512 His Kinase A (phospho-acceptor) domain 469 534 5.9E-19 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_03852 fba5c14c799520904affcc5b95fb2b8a 961 Gene3D G3DSA:3.30.565.10 533 696 3.1E-50 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_03852 fba5c14c799520904affcc5b95fb2b8a 961 PRINTS PR00344 Bacterial sensor protein C-terminal signature 652 670 2.0E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_03852 fba5c14c799520904affcc5b95fb2b8a 961 PRINTS PR00344 Bacterial sensor protein C-terminal signature 618 632 2.0E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_03852 fba5c14c799520904affcc5b95fb2b8a 961 PRINTS PR00344 Bacterial sensor protein C-terminal signature 676 689 2.0E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_03852 fba5c14c799520904affcc5b95fb2b8a 961 PRINTS PR00344 Bacterial sensor protein C-terminal signature 636 646 2.0E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_03852 fba5c14c799520904affcc5b95fb2b8a 961 SMART SM00448 709 828 1.6E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_03852 fba5c14c799520904affcc5b95fb2b8a 961 Pfam PF01627 Hpt domain 875 935 1.7E-12 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VSVS12_03852 fba5c14c799520904affcc5b95fb2b8a 961 Gene3D G3DSA:3.40.50.2300 708 852 9.2E-34 T 11-10-2018 VSVS12_03852 fba5c14c799520904affcc5b95fb2b8a 961 TIGRFAM TIGR02956 TMAO_torS: TMAO reductase sytem sensor TorS 7 956 0.0 T 11-10-2018 IPR014302 Signal transduction histidine kinase, TMAO sensor TorS GO:0000155|GO:0000160|GO:0004673|GO:0016021 VSVS12_03852 fba5c14c799520904affcc5b95fb2b8a 961 SMART SM00073 864 960 0.0073 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VSVS12_02887 fcf71e50138307db2f03d8ea5bd7c550 126 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 93 6.6E-39 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02887 fcf71e50138307db2f03d8ea5bd7c550 126 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 22.122 T 11-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 VSVS12_02887 fcf71e50138307db2f03d8ea5bd7c550 126 Gene3D G3DSA:3.30.70.60 1 92 8.3E-33 T 11-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 VSVS12_02887 fcf71e50138307db2f03d8ea5bd7c550 126 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 11-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 VSVS12_02887 fcf71e50138307db2f03d8ea5bd7c550 126 SUPERFAMILY SSF54995 1 103 1.83E-38 T 11-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02887 fcf71e50138307db2f03d8ea5bd7c550 126 Pfam PF01250 Ribosomal protein S6 3 91 9.5E-29 T 11-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_01749 34edddfc9ef794979be0e1f76f81b6fe 423 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 81 102 3.7E-40 T 11-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VSVS12_01749 34edddfc9ef794979be0e1f76f81b6fe 423 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 201 219 3.7E-40 T 11-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VSVS12_01749 34edddfc9ef794979be0e1f76f81b6fe 423 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 242 267 3.7E-40 T 11-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VSVS12_01749 34edddfc9ef794979be0e1f76f81b6fe 423 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 112 132 3.7E-40 T 11-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VSVS12_01749 34edddfc9ef794979be0e1f76f81b6fe 423 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 291 317 3.7E-40 T 11-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VSVS12_01749 34edddfc9ef794979be0e1f76f81b6fe 423 PRINTS PR00071 Hydroxymethylglutaryl-coenzyme A reductase signature 344 365 3.7E-40 T 11-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VSVS12_01749 34edddfc9ef794979be0e1f76f81b6fe 423 ProSitePatterns PS00318 Hydroxymethylglutaryl-coenzyme A reductases signature 2. 356 363 - T 11-10-2018 IPR023076 Hydroxymethylglutaryl-CoA reductase, class I/II, conserved site GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VSVS12_01749 34edddfc9ef794979be0e1f76f81b6fe 423 Pfam PF00368 Hydroxymethylglutaryl-coenzyme A reductase 51 419 1.4E-113 T 11-10-2018 IPR002202 Hydroxymethylglutaryl-CoA reductase, class I/II GO:0004420|GO:0015936|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VSVS12_01749 34edddfc9ef794979be0e1f76f81b6fe 423 Gene3D G3DSA:3.90.770.10 92 405 5.1E-111 T 11-10-2018 IPR023074 Hydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain superfamily GO:0004420|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VSVS12_01749 34edddfc9ef794979be0e1f76f81b6fe 423 SUPERFAMILY SSF56542 30 409 4.84E-79 T 11-10-2018 IPR009029 Hydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain superfamily GO:0015936|GO:0016616|GO:0050662|GO:0055114 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VSVS12_01749 34edddfc9ef794979be0e1f76f81b6fe 423 SUPERFAMILY SSF55035 146 261 9.29E-36 T 11-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VSVS12_01749 34edddfc9ef794979be0e1f76f81b6fe 423 Gene3D G3DSA:3.30.70.420 146 261 5.1E-111 T 11-10-2018 IPR009023 Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain superfamily GO:0050662 KEGG: 00900+1.1.1.34|MetaCyc: PWY-6174|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-922|Reactome: R-HSA-191273|Reactome: R-HSA-1989781|Reactome: R-HSA-2426168 VSVS12_04117 8ca8341db386ceb36796215dc8567c74 551 Gene3D G3DSA:3.40.50.300 289 551 8.3E-78 T 11-10-2018 VSVS12_04117 8ca8341db386ceb36796215dc8567c74 551 Gene3D G3DSA:3.40.50.300 16 288 3.0E-83 T 11-10-2018 VSVS12_04117 8ca8341db386ceb36796215dc8567c74 551 SUPERFAMILY SSF52540 310 542 1.25E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_04117 8ca8341db386ceb36796215dc8567c74 551 SMART SM00382 325 529 4.9E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_04117 8ca8341db386ceb36796215dc8567c74 551 SMART SM00382 46 246 1.5E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_04117 8ca8341db386ceb36796215dc8567c74 551 Pfam PF00005 ABC transporter 37 196 5.0E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_04117 8ca8341db386ceb36796215dc8567c74 551 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_04117 8ca8341db386ceb36796215dc8567c74 551 SUPERFAMILY SSF52540 19 267 3.99E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_04117 8ca8341db386ceb36796215dc8567c74 551 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 522 549 0.17 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VSVS12_04117 8ca8341db386ceb36796215dc8567c74 551 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 248 274 8.1E-5 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VSVS12_04117 8ca8341db386ceb36796215dc8567c74 551 ProSitePatterns PS00211 ABC transporters family signature. 443 457 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_04117 8ca8341db386ceb36796215dc8567c74 551 Pfam PF00005 ABC transporter 317 471 9.5E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_01933 b4f7e91bb8d08da980ab9181a555bc78 471 PIRSF PIRSF000521 36 455 1.8E-33 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VSVS12_01933 b4f7e91bb8d08da980ab9181a555bc78 471 Gene3D G3DSA:3.90.1150.10 12 452 6.8E-155 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VSVS12_01933 b4f7e91bb8d08da980ab9181a555bc78 471 Pfam PF00202 Aminotransferase class-III 34 452 4.6E-81 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VSVS12_01933 b4f7e91bb8d08da980ab9181a555bc78 471 SUPERFAMILY SSF53383 30 454 1.34E-112 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VSVS12_01933 b4f7e91bb8d08da980ab9181a555bc78 471 Gene3D G3DSA:3.40.640.10 68 347 6.8E-155 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VSVS12_01933 b4f7e91bb8d08da980ab9181a555bc78 471 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 257 294 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VSVS12_04561 a54c58e027f4cbe0b1cddb1a8151c505 480 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 14 464 6.4E-133 T 11-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 VSVS12_04561 a54c58e027f4cbe0b1cddb1a8151c505 480 Pfam PF03553 Na+/H+ antiporter family 167 460 3.7E-56 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VSVS12_04261 7576484808285bfcfefd4dd85e10d38a 527 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 218 231 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VSVS12_04261 7576484808285bfcfefd4dd85e10d38a 527 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 280 295 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VSVS12_04261 7576484808285bfcfefd4dd85e10d38a 527 SUPERFAMILY SSF52540 193 428 4.92E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_04261 7576484808285bfcfefd4dd85e10d38a 527 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 407 416 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VSVS12_04261 7576484808285bfcfefd4dd85e10d38a 527 SUPERFAMILY SSF46689 469 517 9.86E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_04261 7576484808285bfcfefd4dd85e10d38a 527 Gene3D G3DSA:3.30.450.40 2 176 1.1E-14 T 11-10-2018 IPR029016 GAF-like domain superfamily VSVS12_04261 7576484808285bfcfefd4dd85e10d38a 527 Gene3D G3DSA:1.10.8.60 365 430 3.0E-19 T 11-10-2018 VSVS12_04261 7576484808285bfcfefd4dd85e10d38a 527 SUPERFAMILY SSF55781 8 162 3.71E-15 T 11-10-2018 VSVS12_04261 7576484808285bfcfefd4dd85e10d38a 527 SMART SM00382 214 357 6.1E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_04261 7576484808285bfcfefd4dd85e10d38a 527 Pfam PF00158 Sigma-54 interaction domain 194 360 1.5E-67 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VSVS12_04261 7576484808285bfcfefd4dd85e10d38a 527 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 481 498 5.6E-5 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VSVS12_04261 7576484808285bfcfefd4dd85e10d38a 527 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 498 518 5.6E-5 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VSVS12_04261 7576484808285bfcfefd4dd85e10d38a 527 Gene3D G3DSA:3.40.50.300 180 364 1.0E-62 T 11-10-2018 VSVS12_04261 7576484808285bfcfefd4dd85e10d38a 527 SMART SM00065 21 169 9.8E-8 T 11-10-2018 IPR003018 GAF domain GO:0005515 VSVS12_04261 7576484808285bfcfefd4dd85e10d38a 527 Pfam PF01590 GAF domain 23 163 2.9E-6 T 11-10-2018 IPR003018 GAF domain GO:0005515 VSVS12_04261 7576484808285bfcfefd4dd85e10d38a 527 Gene3D G3DSA:1.10.10.60 464 521 2.5E-10 T 11-10-2018 VSVS12_01723 eb95d00976cb29b59512db3eeed41fdb 232 Gene3D G3DSA:1.10.3720.10 1 229 2.0E-28 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_01723 eb95d00976cb29b59512db3eeed41fdb 232 SUPERFAMILY SSF161098 15 221 1.13E-29 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_01723 eb95d00976cb29b59512db3eeed41fdb 232 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 220 8.1E-10 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VSVS12_02279 91f7dda0dbdac96dd4b3e2c8a2aab5c6 403 SUPERFAMILY SSF53901 1 251 3.84E-67 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 VSVS12_02279 91f7dda0dbdac96dd4b3e2c8a2aab5c6 403 Gene3D G3DSA:3.40.47.10 1 253 1.3E-68 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 VSVS12_02279 91f7dda0dbdac96dd4b3e2c8a2aab5c6 403 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 152 168 - T 11-10-2018 IPR018201 Beta-ketoacyl synthase, active site VSVS12_02279 91f7dda0dbdac96dd4b3e2c8a2aab5c6 403 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 252 358 5.3E-27 T 11-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal VSVS12_02279 91f7dda0dbdac96dd4b3e2c8a2aab5c6 403 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 244 1.3E-45 T 11-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal VSVS12_02279 91f7dda0dbdac96dd4b3e2c8a2aab5c6 403 SUPERFAMILY SSF53901 213 400 9.46E-61 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 VSVS12_02279 91f7dda0dbdac96dd4b3e2c8a2aab5c6 403 SMART SM00825 Beta-ketoacyl synthase 4 403 2.5E-14 T 11-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain VSVS12_02279 91f7dda0dbdac96dd4b3e2c8a2aab5c6 403 Gene3D G3DSA:3.40.47.10 258 401 1.1E-49 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 VSVS12_01138 9f4cbd783bef50fd8a832b782a32d61f 446 TIGRFAM TIGR02765 crypto_DASH: cryptochrome, DASH family 5 419 6.9E-159 T 11-10-2018 IPR014133 Cryptochrome DASH GO:0003913|GO:0006281 VSVS12_01138 9f4cbd783bef50fd8a832b782a32d61f 446 Pfam PF03441 FAD binding domain of DNA photolyase 274 423 3.1E-41 T 11-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 VSVS12_01138 9f4cbd783bef50fd8a832b782a32d61f 446 SUPERFAMILY SSF52425 3 184 2.75E-35 T 11-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 VSVS12_01138 9f4cbd783bef50fd8a832b782a32d61f 446 Gene3D G3DSA:1.10.579.10 303 439 4.3E-50 T 11-10-2018 VSVS12_01138 9f4cbd783bef50fd8a832b782a32d61f 446 SUPERFAMILY SSF48173 194 423 1.83E-67 T 11-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 VSVS12_01138 9f4cbd783bef50fd8a832b782a32d61f 446 Pfam PF00875 DNA photolyase 7 163 1.6E-26 T 11-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 VSVS12_01138 9f4cbd783bef50fd8a832b782a32d61f 446 Gene3D G3DSA:1.25.40.80 135 294 7.0E-45 T 11-10-2018 VSVS12_01138 9f4cbd783bef50fd8a832b782a32d61f 446 PRINTS PR00147 DNA photolyase signature 341 359 7.6E-12 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VSVS12_01138 9f4cbd783bef50fd8a832b782a32d61f 446 PRINTS PR00147 DNA photolyase signature 321 337 7.6E-12 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VSVS12_01138 9f4cbd783bef50fd8a832b782a32d61f 446 PRINTS PR00147 DNA photolyase signature 380 394 7.6E-12 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VSVS12_01138 9f4cbd783bef50fd8a832b782a32d61f 446 Gene3D G3DSA:3.40.50.620 1 133 8.0E-24 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VSVS12_00517 bc1615e595c216b2b84fb96805b536b9 574 SUPERFAMILY SSF55124 15 146 3.27E-27 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VSVS12_00517 bc1615e595c216b2b84fb96805b536b9 574 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 433 555 8.7E-6 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VSVS12_00517 bc1615e595c216b2b84fb96805b536b9 574 Gene3D G3DSA:3.90.480.20 17 411 2.0E-82 T 11-10-2018 VSVS12_00517 bc1615e595c216b2b84fb96805b536b9 574 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 481 497 - T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VSVS12_00517 bc1615e595c216b2b84fb96805b536b9 574 SUPERFAMILY SSF55124 348 424 4.11E-20 T 11-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VSVS12_00517 bc1615e595c216b2b84fb96805b536b9 574 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 11 574 57.689 T 11-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VSVS12_00517 bc1615e595c216b2b84fb96805b536b9 574 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 20 562 1.1E-283 T 11-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VSVS12_00517 bc1615e595c216b2b84fb96805b536b9 574 Gene3D G3DSA:3.30.413.10 142 350 2.0E-82 T 11-10-2018 VSVS12_00517 bc1615e595c216b2b84fb96805b536b9 574 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 355 418 9.2E-13 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VSVS12_00517 bc1615e595c216b2b84fb96805b536b9 574 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 80 139 1.5E-13 T 11-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VSVS12_00517 bc1615e595c216b2b84fb96805b536b9 574 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 174 332 5.0E-46 T 11-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VSVS12_00517 bc1615e595c216b2b84fb96805b536b9 574 Gene3D G3DSA:3.30.413.10 428 571 1.8E-35 T 11-10-2018 VSVS12_00517 bc1615e595c216b2b84fb96805b536b9 574 SUPERFAMILY SSF56014 431 562 9.16E-35 T 11-10-2018 VSVS12_00517 bc1615e595c216b2b84fb96805b536b9 574 SUPERFAMILY SSF56014 150 346 3.01E-58 T 11-10-2018 VSVS12_00517 bc1615e595c216b2b84fb96805b536b9 574 PRINTS PR00397 Sirohaem Fe-binding site signature 481 499 4.6E-9 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VSVS12_00517 bc1615e595c216b2b84fb96805b536b9 574 PRINTS PR00397 Sirohaem Fe-binding site signature 432 450 4.6E-9 T 11-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VSVS12_02957 162d9c71fa74b75e6f592d8281a672ee 163 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 27 7.1E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_02957 162d9c71fa74b75e6f592d8281a672ee 163 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 27 7.4E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_02957 162d9c71fa74b75e6f592d8281a672ee 163 Gene3D G3DSA:3.30.700.10 8 135 3.3E-12 T 11-10-2018 VSVS12_02957 162d9c71fa74b75e6f592d8281a672ee 163 SUPERFAMILY SSF54523 8 128 7.61E-14 T 11-10-2018 VSVS12_04159 eadf7cc382a2f72d080ed327ec2fbb36 306 Pfam PF03466 LysR substrate binding domain 93 293 1.8E-19 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_04159 eadf7cc382a2f72d080ed327ec2fbb36 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.4E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_04159 eadf7cc382a2f72d080ed327ec2fbb36 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.4E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_04159 eadf7cc382a2f72d080ed327ec2fbb36 306 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.4E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_04159 eadf7cc382a2f72d080ed327ec2fbb36 306 SUPERFAMILY SSF46785 2 85 7.89E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_04159 eadf7cc382a2f72d080ed327ec2fbb36 306 Gene3D G3DSA:3.40.190.10 168 267 5.4E-49 T 11-10-2018 VSVS12_04159 eadf7cc382a2f72d080ed327ec2fbb36 306 Gene3D G3DSA:1.10.10.10 1 86 1.1E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_04159 eadf7cc382a2f72d080ed327ec2fbb36 306 Gene3D G3DSA:3.40.190.10 90 290 5.4E-49 T 11-10-2018 VSVS12_04159 eadf7cc382a2f72d080ed327ec2fbb36 306 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 2.5E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_04159 eadf7cc382a2f72d080ed327ec2fbb36 306 SUPERFAMILY SSF53850 88 294 1.23E-33 T 11-10-2018 VSVS12_02654 55bfafdd8d73562a570c730a5522a9e9 210 Gene3D G3DSA:1.10.10.880 6 71 2.2E-22 T 11-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 VSVS12_02654 55bfafdd8d73562a570c730a5522a9e9 210 SUPERFAMILY SSF89069 8 71 1.57E-19 T 11-10-2018 IPR036147 Anti sigma-E protein RseA, N-terminal domain superfamily GO:0016989 VSVS12_02654 55bfafdd8d73562a570c730a5522a9e9 210 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 141 193 9.4E-21 T 11-10-2018 IPR005573 Anti sigma-E protein RseA, C-terminal VSVS12_02654 55bfafdd8d73562a570c730a5522a9e9 210 PIRSF PIRSF016938 3 204 7.5E-35 T 11-10-2018 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0016989 VSVS12_02654 55bfafdd8d73562a570c730a5522a9e9 210 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 5 101 7.5E-33 T 11-10-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 VSVS12_03047 30a2462266639afe70a918de59d873d0 266 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 4.8E-136 T 11-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 VSVS12_03047 30a2462266639afe70a918de59d873d0 266 Gene3D G3DSA:3.40.50.1360 1 266 2.8E-118 T 11-10-2018 VSVS12_03047 30a2462266639afe70a918de59d873d0 266 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 224 1.5E-19 T 11-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 VSVS12_03047 30a2462266639afe70a918de59d873d0 266 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 11-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 VSVS12_03047 30a2462266639afe70a918de59d873d0 266 SUPERFAMILY SSF100950 1 263 1.2E-102 T 11-10-2018 IPR037171 NagB/RpiA transferase-like VSVS12_03047 30a2462266639afe70a918de59d873d0 266 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 40.573 T 11-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 VSVS12_02638 cb949a146af66b6bc378a228ffad4d7f 403 SUPERFAMILY SSF81891 121 401 1.22E-53 T 11-10-2018 VSVS12_02638 cb949a146af66b6bc378a228ffad4d7f 403 Gene3D G3DSA:3.30.460.10 1 121 3.3E-27 T 11-10-2018 VSVS12_02638 cb949a146af66b6bc378a228ffad4d7f 403 Gene3D G3DSA:1.10.3090.10 122 402 2.5E-42 T 11-10-2018 VSVS12_02638 cb949a146af66b6bc378a228ffad4d7f 403 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 149 212 8.1E-13 T 11-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 VSVS12_02638 cb949a146af66b6bc378a228ffad4d7f 403 Pfam PF01966 HD domain 229 343 6.3E-8 T 11-10-2018 IPR006674 HD domain VSVS12_02638 cb949a146af66b6bc378a228ffad4d7f 403 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 42.129 T 11-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 VSVS12_02638 cb949a146af66b6bc378a228ffad4d7f 403 Pfam PF01743 Poly A polymerase head domain 4 122 1.4E-16 T 11-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 VSVS12_02638 cb949a146af66b6bc378a228ffad4d7f 403 PIRSF PIRSF000813 1 403 4.5E-198 T 11-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 VSVS12_02638 cb949a146af66b6bc378a228ffad4d7f 403 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 403 51.377 T 11-10-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 VSVS12_02638 cb949a146af66b6bc378a228ffad4d7f 403 SUPERFAMILY SSF81301 3 119 7.3E-30 T 11-10-2018 VSVS12_01979 f23dc7185ca4db5109c3b4d1dfdbb5ae 432 SUPERFAMILY SSF118215 9 412 1.96E-84 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VSVS12_01979 f23dc7185ca4db5109c3b4d1dfdbb5ae 432 Pfam PF00375 Sodium:dicarboxylate symporter family 12 412 6.6E-87 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 VSVS12_01979 f23dc7185ca4db5109c3b4d1dfdbb5ae 432 Gene3D G3DSA:1.10.3860.10 3 430 5.3E-95 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VSVS12_01979 f23dc7185ca4db5109c3b4d1dfdbb5ae 432 PRINTS PR00173 Glutamate-aspartate symporter signature 366 386 2.8E-44 T 11-10-2018 VSVS12_01979 f23dc7185ca4db5109c3b4d1dfdbb5ae 432 PRINTS PR00173 Glutamate-aspartate symporter signature 55 75 2.8E-44 T 11-10-2018 VSVS12_01979 f23dc7185ca4db5109c3b4d1dfdbb5ae 432 PRINTS PR00173 Glutamate-aspartate symporter signature 155 177 2.8E-44 T 11-10-2018 VSVS12_01979 f23dc7185ca4db5109c3b4d1dfdbb5ae 432 PRINTS PR00173 Glutamate-aspartate symporter signature 237 256 2.8E-44 T 11-10-2018 VSVS12_01979 f23dc7185ca4db5109c3b4d1dfdbb5ae 432 PRINTS PR00173 Glutamate-aspartate symporter signature 339 358 2.8E-44 T 11-10-2018 VSVS12_01979 f23dc7185ca4db5109c3b4d1dfdbb5ae 432 PRINTS PR00173 Glutamate-aspartate symporter signature 304 330 2.8E-44 T 11-10-2018 VSVS12_01979 f23dc7185ca4db5109c3b4d1dfdbb5ae 432 PRINTS PR00173 Glutamate-aspartate symporter signature 85 110 2.8E-44 T 11-10-2018 VSVS12_03627 8cde5f972885aca0782fd2b253ccf51c 683 SMART SM00387 307 415 1.5E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_03627 8cde5f972885aca0782fd2b253ccf51c 683 SUPERFAMILY SSF52172 563 683 3.13E-34 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_03627 8cde5f972885aca0782fd2b253ccf51c 683 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 310 413 1.1E-15 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_03627 8cde5f972885aca0782fd2b253ccf51c 683 PRINTS PR00344 Bacterial sensor protein C-terminal signature 363 373 4.1E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_03627 8cde5f972885aca0782fd2b253ccf51c 683 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 393 4.1E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_03627 8cde5f972885aca0782fd2b253ccf51c 683 PRINTS PR00344 Bacterial sensor protein C-terminal signature 345 359 4.1E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_03627 8cde5f972885aca0782fd2b253ccf51c 683 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 412 4.1E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_03627 8cde5f972885aca0782fd2b253ccf51c 683 SMART SM00448 565 679 1.3E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_03627 8cde5f972885aca0782fd2b253ccf51c 683 SUPERFAMILY SSF55874 253 415 2.23E-31 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_03627 8cde5f972885aca0782fd2b253ccf51c 683 Gene3D G3DSA:3.40.50.2300 552 683 7.0E-35 T 11-10-2018 VSVS12_03627 8cde5f972885aca0782fd2b253ccf51c 683 Gene3D G3DSA:3.30.565.10 266 416 7.8E-27 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_03627 8cde5f972885aca0782fd2b253ccf51c 683 SUPERFAMILY SSF47384 168 210 8.04E-6 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VSVS12_03627 8cde5f972885aca0782fd2b253ccf51c 683 Pfam PF00072 Response regulator receiver domain 568 679 5.0E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_03627 8cde5f972885aca0782fd2b253ccf51c 683 Gene3D G3DSA:1.10.287.130 168 262 4.2E-5 T 11-10-2018 VSVS12_03057 630dc62380caacfaa0afc5d02a32e5bc 129 SMART SM00347 15 115 2.9E-26 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VSVS12_03057 630dc62380caacfaa0afc5d02a32e5bc 129 Pfam PF01047 MarR family 24 79 2.6E-15 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VSVS12_03057 630dc62380caacfaa0afc5d02a32e5bc 129 SUPERFAMILY SSF46785 4 128 9.11E-35 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_03057 630dc62380caacfaa0afc5d02a32e5bc 129 Gene3D G3DSA:1.10.10.10 1 129 3.3E-36 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_03057 630dc62380caacfaa0afc5d02a32e5bc 129 PRINTS PR00598 Bacterial regulatory protein MarR family signature 39 55 2.3E-13 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VSVS12_03057 630dc62380caacfaa0afc5d02a32e5bc 129 PRINTS PR00598 Bacterial regulatory protein MarR family signature 75 91 2.3E-13 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VSVS12_03057 630dc62380caacfaa0afc5d02a32e5bc 129 PRINTS PR00598 Bacterial regulatory protein MarR family signature 56 71 2.3E-13 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VSVS12_03057 630dc62380caacfaa0afc5d02a32e5bc 129 PRINTS PR00598 Bacterial regulatory protein MarR family signature 105 125 2.3E-13 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VSVS12_03564 dc940317d85df8a00c110daf4dfcaa98 417 Gene3D G3DSA:3.60.40.10 166 408 1.2E-50 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VSVS12_03564 dc940317d85df8a00c110daf4dfcaa98 417 SMART SM00448 2 116 2.1E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_03564 dc940317d85df8a00c110daf4dfcaa98 417 SUPERFAMILY SSF81606 179 393 2.54E-7 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VSVS12_03564 dc940317d85df8a00c110daf4dfcaa98 417 SUPERFAMILY SSF52172 2 153 3.42E-32 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_03564 dc940317d85df8a00c110daf4dfcaa98 417 SMART SM00331 164 393 1.1E-25 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VSVS12_03564 dc940317d85df8a00c110daf4dfcaa98 417 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 191 393 2.9E-37 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VSVS12_03564 dc940317d85df8a00c110daf4dfcaa98 417 Gene3D G3DSA:3.40.50.12740 2 161 5.7E-33 T 11-10-2018 VSVS12_03564 dc940317d85df8a00c110daf4dfcaa98 417 Pfam PF00072 Response regulator receiver domain 4 117 1.1E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_02984 2575495aef871798a88862dcd2069eba 98 SUPERFAMILY SSF46689 8 98 1.84E-24 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_02984 2575495aef871798a88862dcd2069eba 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 31.402 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VSVS12_02984 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 2.0E-31 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VSVS12_02984 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 2.0E-31 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VSVS12_02984 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 2.0E-31 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VSVS12_02984 2575495aef871798a88862dcd2069eba 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 2.0E-31 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VSVS12_02984 2575495aef871798a88862dcd2069eba 98 PIRSF PIRSF002097 1 98 2.6E-44 T 11-10-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 VSVS12_02984 2575495aef871798a88862dcd2069eba 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 4.0E-14 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VSVS12_02984 2575495aef871798a88862dcd2069eba 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 3.3E-13 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VSVS12_02984 2575495aef871798a88862dcd2069eba 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 3.3E-13 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VSVS12_02984 2575495aef871798a88862dcd2069eba 98 Gene3D G3DSA:1.10.10.60 1 98 2.7E-32 T 11-10-2018 VSVS12_03706 d5c603c17bce7e56eba25eb18f0400dd 392 Gene3D G3DSA:1.10.443.10 192 384 1.5E-38 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VSVS12_03706 d5c603c17bce7e56eba25eb18f0400dd 392 Pfam PF00589 Phage integrase family 205 368 3.7E-19 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VSVS12_03706 d5c603c17bce7e56eba25eb18f0400dd 392 SUPERFAMILY SSF56349 90 377 1.32E-52 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VSVS12_03706 d5c603c17bce7e56eba25eb18f0400dd 392 Gene3D G3DSA:1.10.150.130 85 191 1.4E-12 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal VSVS12_03706 d5c603c17bce7e56eba25eb18f0400dd 392 Pfam PF12167 Arm DNA-binding domain 1 64 1.1E-23 T 11-10-2018 IPR022000 Min27-like integrase, DNA-binding domain VSVS12_03706 d5c603c17bce7e56eba25eb18f0400dd 392 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 90 146 8.1E-8 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VSVS12_01353 1b13af74b90462fc7c57f644616522e9 196 Gene3D G3DSA:3.40.50.10610 39 188 9.6E-43 T 11-10-2018 VSVS12_01353 1b13af74b90462fc7c57f644616522e9 196 Pfam PF13036 Peptidoglycan-synthase activator LpoB 41 185 6.8E-54 T 11-10-2018 IPR014094 Penicillin-binding protein activator LpoB VSVS12_01353 1b13af74b90462fc7c57f644616522e9 196 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 3 187 2.4E-72 T 11-10-2018 IPR014094 Penicillin-binding protein activator LpoB VSVS12_01671 289287b43fb3060bbe450da557b9bfea 181 PIRSF PIRSF010252 1 178 1.3E-66 T 11-10-2018 IPR009809 Cell division protein ZapC VSVS12_01671 289287b43fb3060bbe450da557b9bfea 181 Hamap MF_00906 Cell division protein ZapC [zapC]. 1 178 35.649 T 11-10-2018 IPR009809 Cell division protein ZapC VSVS12_01671 289287b43fb3060bbe450da557b9bfea 181 Pfam PF07126 Cell-division protein ZapC 1 170 9.0E-63 T 11-10-2018 IPR009809 Cell division protein ZapC VSVS12_02174 b1494e550ff07cfe10fbab6261d79653 245 Gene3D G3DSA:3.40.50.150 21 245 1.9E-63 T 11-10-2018 VSVS12_02174 b1494e550ff07cfe10fbab6261d79653 245 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 8 245 5.9E-117 T 11-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 VSVS12_02174 b1494e550ff07cfe10fbab6261d79653 245 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 6 245 43.275 T 11-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 VSVS12_02174 b1494e550ff07cfe10fbab6261d79653 245 PIRSF PIRSF006325 4 245 5.6E-124 T 11-10-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 VSVS12_02174 b1494e550ff07cfe10fbab6261d79653 245 Pfam PF13649 Methyltransferase domain 63 161 1.5E-13 T 11-10-2018 VSVS12_02174 b1494e550ff07cfe10fbab6261d79653 245 SUPERFAMILY SSF53335 23 245 5.83E-40 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_01544 503ffc14d000ae945c9c1d00f238fb9d 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.6E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_01544 503ffc14d000ae945c9c1d00f238fb9d 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.6E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_01544 503ffc14d000ae945c9c1d00f238fb9d 303 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.6E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_01544 503ffc14d000ae945c9c1d00f238fb9d 303 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 7.3E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_01544 503ffc14d000ae945c9c1d00f238fb9d 303 Pfam PF03466 LysR substrate binding domain 89 293 9.1E-43 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_01544 503ffc14d000ae945c9c1d00f238fb9d 303 Gene3D G3DSA:3.40.190.10 93 289 4.0E-71 T 11-10-2018 VSVS12_01544 503ffc14d000ae945c9c1d00f238fb9d 303 Gene3D G3DSA:1.10.10.10 1 92 4.0E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_01544 503ffc14d000ae945c9c1d00f238fb9d 303 SUPERFAMILY SSF46785 1 112 7.08E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_01544 503ffc14d000ae945c9c1d00f238fb9d 303 Gene3D G3DSA:3.40.190.10 163 267 4.0E-71 T 11-10-2018 VSVS12_01544 503ffc14d000ae945c9c1d00f238fb9d 303 SUPERFAMILY SSF53850 89 297 2.48E-40 T 11-10-2018 VSVS12_01106 b1c5adb4edd1b12629b74d3d6dfac678 599 PIRSF PIRSF004950 6 597 2.2E-226 T 11-10-2018 IPR012159 Inner membrane protein YejM VSVS12_01106 b1c5adb4edd1b12629b74d3d6dfac678 599 Gene3D G3DSA:3.40.720.10 247 523 1.2E-32 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VSVS12_01106 b1c5adb4edd1b12629b74d3d6dfac678 599 SUPERFAMILY SSF53649 255 580 1.7E-43 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VSVS12_01106 b1c5adb4edd1b12629b74d3d6dfac678 599 Pfam PF00884 Sulfatase 284 512 1.3E-17 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VSVS12_01106 b1c5adb4edd1b12629b74d3d6dfac678 599 Pfam PF11893 Domain of unknown function (DUF3413) 6 250 1.1E-97 T 11-10-2018 IPR024588 Inner membrane protein YejM, N-terminal VSVS12_02324 d0b21380e59926425f8494a5a00919b9 475 Gene3D G3DSA:1.10.1130.10 40 470 3.1E-185 T 11-10-2018 VSVS12_02324 d0b21380e59926425f8494a5a00919b9 475 Gene3D G3DSA:1.20.140.10 309 451 3.1E-185 T 11-10-2018 VSVS12_02324 d0b21380e59926425f8494a5a00919b9 475 SUPERFAMILY SSF48695 37 471 1.24E-159 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily VSVS12_02324 d0b21380e59926425f8494a5a00919b9 475 Pfam PF02335 Cytochrome c552 41 470 3.1E-177 T 11-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 VSVS12_02324 d0b21380e59926425f8494a5a00919b9 475 PIRSF PIRSF000243 6 475 3.8E-123 T 11-10-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 VSVS12_02324 d0b21380e59926425f8494a5a00919b9 475 TIGRFAM TIGR03152 cyto_c552_HCOOH: formate-dependent cytochrome c nitrite reductase, c552 subunit 36 473 2.4E-246 T 11-10-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 VSVS12_02324 d0b21380e59926425f8494a5a00919b9 475 Hamap MF_01182 Cytochrome c-552 [nrfA]. 3 475 57.957 T 11-10-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 VSVS12_00313 d2c17a4f1dce5e40f08fd26731e09ff3 692 SUPERFAMILY SSF52540 205 452 2.6E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00313 d2c17a4f1dce5e40f08fd26731e09ff3 692 Pfam PF00271 Helicase conserved C-terminal domain 479 587 4.0E-17 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_00313 d2c17a4f1dce5e40f08fd26731e09ff3 692 SUPERFAMILY SSF52540 291 652 7.72E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00313 d2c17a4f1dce5e40f08fd26731e09ff3 692 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 28 663 1.3E-234 T 11-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 VSVS12_00313 d2c17a4f1dce5e40f08fd26731e09ff3 692 Gene3D G3DSA:3.40.50.300 456 629 1.7E-53 T 11-10-2018 VSVS12_00313 d2c17a4f1dce5e40f08fd26731e09ff3 692 SMART SM00487 264 458 3.8E-30 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VSVS12_00313 d2c17a4f1dce5e40f08fd26731e09ff3 692 Gene3D G3DSA:2.40.50.140 46 138 2.1E-10 T 11-10-2018 VSVS12_00313 d2c17a4f1dce5e40f08fd26731e09ff3 692 SMART SM00490 504 588 4.5E-22 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_00313 d2c17a4f1dce5e40f08fd26731e09ff3 692 SUPERFAMILY SSF50249 8 173 2.23E-39 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_00313 d2c17a4f1dce5e40f08fd26731e09ff3 692 Pfam PF00270 DEAD/DEAH box helicase 290 430 6.6E-19 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VSVS12_00313 d2c17a4f1dce5e40f08fd26731e09ff3 692 Gene3D G3DSA:3.40.50.300 208 449 7.2E-83 T 11-10-2018 VSVS12_00313 d2c17a4f1dce5e40f08fd26731e09ff3 692 Pfam PF17191 RecG wedge domain 13 170 5.4E-21 T 11-10-2018 IPR033454 RecG, wedge domain VSVS12_02981 f2933168a48bda949f507900bf0816a6 447 Gene3D G3DSA:3.30.470.20 86 433 7.5E-156 T 11-10-2018 VSVS12_02981 f2933168a48bda949f507900bf0816a6 447 Gene3D G3DSA:3.40.50.20 1 85 9.1E-34 T 11-10-2018 VSVS12_02981 f2933168a48bda949f507900bf0816a6 447 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VSVS12_02981 f2933168a48bda949f507900bf0816a6 447 SMART SM00878 336 441 1.2E-64 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VSVS12_02981 f2933168a48bda949f507900bf0816a6 447 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 5.5E-43 T 11-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VSVS12_02981 f2933168a48bda949f507900bf0816a6 447 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VSVS12_02981 f2933168a48bda949f507900bf0816a6 447 SUPERFAMILY SSF56059 83 348 1.17E-69 T 11-10-2018 VSVS12_02981 f2933168a48bda949f507900bf0816a6 447 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 445 5.3E-243 T 11-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 VSVS12_02981 f2933168a48bda949f507900bf0816a6 447 Gene3D G3DSA:3.30.1490.20 131 203 7.5E-156 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VSVS12_02981 f2933168a48bda949f507900bf0816a6 447 SUPERFAMILY SSF52440 1 113 1.58E-45 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VSVS12_02981 f2933168a48bda949f507900bf0816a6 447 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 2.3E-83 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VSVS12_02981 f2933168a48bda949f507900bf0816a6 447 SUPERFAMILY SSF51246 331 444 2.72E-43 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 VSVS12_02981 f2933168a48bda949f507900bf0816a6 447 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 1.1E-37 T 11-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VSVS12_03983 fe2a317eb91438ffe54006ef039ab31d 547 ProSitePatterns PS00211 ABC transporters family signature. 176 190 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_03983 fe2a317eb91438ffe54006ef039ab31d 547 ProSitePatterns PS00211 ABC transporters family signature. 444 458 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_03983 fe2a317eb91438ffe54006ef039ab31d 547 SUPERFAMILY SSF52540 294 543 3.62E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03983 fe2a317eb91438ffe54006ef039ab31d 547 Pfam PF00005 ABC transporter 322 472 1.2E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_03983 fe2a317eb91438ffe54006ef039ab31d 547 SUPERFAMILY SSF52540 24 274 3.84E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03983 fe2a317eb91438ffe54006ef039ab31d 547 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 255 283 4.8E-6 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VSVS12_03983 fe2a317eb91438ffe54006ef039ab31d 547 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 523 545 0.028 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VSVS12_03983 fe2a317eb91438ffe54006ef039ab31d 547 Pfam PF00005 ABC transporter 45 203 7.2E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_03983 fe2a317eb91438ffe54006ef039ab31d 547 SMART SM00382 330 521 2.3E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_03983 fe2a317eb91438ffe54006ef039ab31d 547 SMART SM00382 53 253 1.1E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_03983 fe2a317eb91438ffe54006ef039ab31d 547 Gene3D G3DSA:3.40.50.300 22 292 4.0E-83 T 11-10-2018 VSVS12_03983 fe2a317eb91438ffe54006ef039ab31d 547 Gene3D G3DSA:3.40.50.300 293 546 8.5E-77 T 11-10-2018 VSVS12_01849 c41a4de4b2504d8caa983221630b9951 243 Pfam PF00849 RNA pseudouridylate synthase 71 203 7.0E-17 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VSVS12_01849 c41a4de4b2504d8caa983221630b9951 243 SMART SM00363 11 73 4.0E-4 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_01849 c41a4de4b2504d8caa983221630b9951 243 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 108 122 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VSVS12_01849 c41a4de4b2504d8caa983221630b9951 243 Gene3D G3DSA:3.30.70.1560 137 220 2.9E-56 T 11-10-2018 VSVS12_01849 c41a4de4b2504d8caa983221630b9951 243 SUPERFAMILY SSF55120 70 238 1.58E-41 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VSVS12_01849 c41a4de4b2504d8caa983221630b9951 243 Pfam PF01479 S4 domain 12 56 1.9E-7 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_01849 c41a4de4b2504d8caa983221630b9951 243 Gene3D G3DSA:3.10.290.10 9 71 4.3E-15 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VSVS12_01849 c41a4de4b2504d8caa983221630b9951 243 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 76 235 6.2E-48 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VSVS12_01849 c41a4de4b2504d8caa983221630b9951 243 Gene3D G3DSA:3.30.70.580 72 238 2.9E-56 T 11-10-2018 VSVS12_01849 c41a4de4b2504d8caa983221630b9951 243 SUPERFAMILY SSF55174 6 91 1.47E-11 T 11-10-2018 VSVS12_04304 01945ba9f811b6b66e06ac83edaf9aa6 572 Gene3D G3DSA:3.30.2350.10 360 572 8.9E-61 T 11-10-2018 VSVS12_04304 01945ba9f811b6b66e06ac83edaf9aa6 572 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 416 430 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VSVS12_04304 01945ba9f811b6b66e06ac83edaf9aa6 572 SUPERFAMILY SSF55120 363 569 3.52E-56 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VSVS12_04304 01945ba9f811b6b66e06ac83edaf9aa6 572 Pfam PF00849 RNA pseudouridylate synthase 377 525 1.7E-31 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VSVS12_00032 13069724ce0bc746cb7b39f1365402f0 275 Gene3D G3DSA:3.30.1240.10 90 197 6.0E-74 T 11-10-2018 VSVS12_00032 13069724ce0bc746cb7b39f1365402f0 275 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 12 270 4.5E-62 T 11-10-2018 IPR000150 Cof family GO:0016787 VSVS12_00032 13069724ce0bc746cb7b39f1365402f0 275 ProSitePatterns PS01228 Hypothetical cof family signature 1. 12 23 - T 11-10-2018 VSVS12_00032 13069724ce0bc746cb7b39f1365402f0 275 SUPERFAMILY SSF56784 8 274 2.85E-69 T 11-10-2018 IPR036412 HAD-like superfamily VSVS12_00032 13069724ce0bc746cb7b39f1365402f0 275 Pfam PF08282 haloacid dehalogenase-like hydrolase 13 270 2.1E-69 T 11-10-2018 VSVS12_00032 13069724ce0bc746cb7b39f1365402f0 275 ProSitePatterns PS01229 Hypothetical cof family signature 2. 222 244 - T 11-10-2018 VSVS12_00032 13069724ce0bc746cb7b39f1365402f0 275 Gene3D G3DSA:3.40.50.1000 13 266 6.0E-74 T 11-10-2018 IPR023214 HAD superfamily VSVS12_00032 13069724ce0bc746cb7b39f1365402f0 275 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 12 241 3.3E-33 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 VSVS12_02552 37087da0717f43618e01de8cba68d973 269 Gene3D G3DSA:3.30.360.10 127 234 1.8E-100 T 11-10-2018 VSVS12_02552 37087da0717f43618e01de8cba68d973 269 SUPERFAMILY SSF51735 1 268 5.96E-50 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_02552 37087da0717f43618e01de8cba68d973 269 SUPERFAMILY SSF55347 127 236 1.02E-37 T 11-10-2018 VSVS12_02552 37087da0717f43618e01de8cba68d973 269 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 150 167 - T 11-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VSVS12_02552 37087da0717f43618e01de8cba68d973 269 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 128 264 6.8E-44 T 11-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VSVS12_02552 37087da0717f43618e01de8cba68d973 269 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 2 125 4.4E-39 T 11-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VSVS12_02552 37087da0717f43618e01de8cba68d973 269 PIRSF PIRSF000161 1 268 1.7E-88 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VSVS12_02552 37087da0717f43618e01de8cba68d973 269 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 1 265 6.1E-100 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VSVS12_02552 37087da0717f43618e01de8cba68d973 269 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 265 35.425 T 11-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VSVS12_02552 37087da0717f43618e01de8cba68d973 269 Gene3D G3DSA:3.40.50.720 3 264 1.8E-100 T 11-10-2018 VSVS12_01768 cfd92cb7b60a95a6784fecc1d1a359fa 383 Gene3D G3DSA:3.10.560.10 291 371 1.7E-11 T 11-10-2018 VSVS12_01768 cfd92cb7b60a95a6784fecc1d1a359fa 383 Gene3D G3DSA:3.10.560.10 201 290 5.9E-17 T 11-10-2018 VSVS12_01768 cfd92cb7b60a95a6784fecc1d1a359fa 383 Gene3D G3DSA:3.10.560.10 104 184 8.7E-15 T 11-10-2018 VSVS12_01768 cfd92cb7b60a95a6784fecc1d1a359fa 383 Pfam PF10531 SLBB domain 214 255 2.9E-6 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VSVS12_01768 cfd92cb7b60a95a6784fecc1d1a359fa 383 Pfam PF10531 SLBB domain 301 353 8.9E-13 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VSVS12_01768 cfd92cb7b60a95a6784fecc1d1a359fa 383 Pfam PF10531 SLBB domain 107 151 1.5E-4 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VSVS12_01768 cfd92cb7b60a95a6784fecc1d1a359fa 383 Pfam PF02563 Polysaccharide biosynthesis/export protein 30 93 1.5E-10 T 11-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 VSVS12_01768 cfd92cb7b60a95a6784fecc1d1a359fa 383 Gene3D G3DSA:3.30.1950.10 46 103 8.7E-15 T 11-10-2018 VSVS12_01115 af2e48bfb23ba573c07bb8cd7bf6e3d7 173 Gene3D G3DSA:3.30.700.10 8 155 3.4E-14 T 11-10-2018 VSVS12_01115 af2e48bfb23ba573c07bb8cd7bf6e3d7 173 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 28 5.3E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_01115 af2e48bfb23ba573c07bb8cd7bf6e3d7 173 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 28 3.1E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_01115 af2e48bfb23ba573c07bb8cd7bf6e3d7 173 SUPERFAMILY SSF54523 8 117 3.92E-14 T 11-10-2018 VSVS12_01115 af2e48bfb23ba573c07bb8cd7bf6e3d7 173 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_03318 5588c4829ca782266793459c422b9b4b 697 SMART SM00304 366 420 1.1E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_03318 5588c4829ca782266793459c422b9b4b 697 Gene3D G3DSA:3.30.450.20 72 226 8.2E-23 T 11-10-2018 VSVS12_03318 5588c4829ca782266793459c422b9b4b 697 SUPERFAMILY SSF58104 388 697 1.57E-70 T 11-10-2018 VSVS12_03318 5588c4829ca782266793459c422b9b4b 697 Gene3D G3DSA:1.10.287.950 366 697 4.2E-66 T 11-10-2018 VSVS12_03318 5588c4829ca782266793459c422b9b4b 697 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 484 661 6.5E-40 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_03318 5588c4829ca782266793459c422b9b4b 697 Gene3D G3DSA:3.30.450.20 63 322 8.2E-23 T 11-10-2018 VSVS12_03318 5588c4829ca782266793459c422b9b4b 697 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 562 591 6.1E-21 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VSVS12_03318 5588c4829ca782266793459c422b9b4b 697 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 533 560 6.1E-21 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VSVS12_03318 5588c4829ca782266793459c422b9b4b 697 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 456 485 6.1E-21 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VSVS12_03318 5588c4829ca782266793459c422b9b4b 697 SMART SM00283 435 696 2.1E-58 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_03984 8fd93b4f8bf21c16e595c4bf451429ff 367 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 30 76 5.1E-8 T 11-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VSVS12_03984 8fd93b4f8bf21c16e595c4bf451429ff 367 Gene3D G3DSA:1.10.3720.10 154 359 1.8E-16 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_03984 8fd93b4f8bf21c16e595c4bf451429ff 367 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 182 362 2.4E-26 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VSVS12_03984 8fd93b4f8bf21c16e595c4bf451429ff 367 SUPERFAMILY SSF161098 159 346 8.24E-19 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_02987 e921df93a7b72d5bbbebca5aae147f35 529 Gene3D G3DSA:3.40.50.1380 3 196 1.9E-87 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VSVS12_02987 e921df93a7b72d5bbbebca5aae147f35 529 Gene3D G3DSA:3.40.140.20 393 529 4.1E-60 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VSVS12_02987 e921df93a7b72d5bbbebca5aae147f35 529 SUPERFAMILY SSF52335 6 196 8.37E-72 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VSVS12_02987 e921df93a7b72d5bbbebca5aae147f35 529 PIRSF PIRSF000414 1 529 7.7E-229 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VSVS12_02987 e921df93a7b72d5bbbebca5aae147f35 529 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 7 529 6.5E-261 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VSVS12_02987 e921df93a7b72d5bbbebca5aae147f35 529 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 6 529 45.907 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VSVS12_02987 e921df93a7b72d5bbbebca5aae147f35 529 SMART SM00851 18 131 1.1E-61 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain VSVS12_02987 e921df93a7b72d5bbbebca5aae147f35 529 Gene3D G3DSA:3.40.140.20 218 374 5.7E-59 T 11-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VSVS12_02987 e921df93a7b72d5bbbebca5aae147f35 529 Pfam PF01808 AICARFT/IMPCHase bienzyme 136 460 4.8E-120 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VSVS12_02987 e921df93a7b72d5bbbebca5aae147f35 529 SUPERFAMILY SSF53927 221 529 2.01E-130 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VSVS12_02987 e921df93a7b72d5bbbebca5aae147f35 529 SMART SM00798 136 461 2.8E-219 T 11-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VSVS12_02987 e921df93a7b72d5bbbebca5aae147f35 529 Pfam PF02142 MGS-like domain 18 131 3.3E-31 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain VSVS12_03800 5daa679e4f6fc6a5069324d68423b148 186 Gene3D G3DSA:3.40.630.30 2 169 1.0E-29 T 11-10-2018 VSVS12_03800 5daa679e4f6fc6a5069324d68423b148 186 SUPERFAMILY SSF55729 1 148 3.93E-25 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_03800 5daa679e4f6fc6a5069324d68423b148 186 Pfam PF00583 Acetyltransferase (GNAT) family 56 141 2.1E-14 T 11-10-2018 IPR000182 GNAT domain VSVS12_02087 b434a208cfdf699cc396d51afabcc2f7 227 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 23 222 1.1E-34 T 11-10-2018 IPR018635 Uncharacterised protein family UPF0319 VSVS12_00818 e52db9a34fa33d2082d27f9835ba0bfc 293 SUPERFAMILY SSF48179 168 290 7.14E-32 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VSVS12_00818 e52db9a34fa33d2082d27f9835ba0bfc 293 Pfam PF02558 Ketopantoate reductase PanE/ApbA 4 142 6.6E-33 T 11-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain VSVS12_00818 e52db9a34fa33d2082d27f9835ba0bfc 293 SUPERFAMILY SSF51735 1 165 2.46E-48 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_00818 e52db9a34fa33d2082d27f9835ba0bfc 293 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 292 8.2E-79 T 11-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 VSVS12_00818 e52db9a34fa33d2082d27f9835ba0bfc 293 Gene3D G3DSA:3.40.50.720 1 166 5.2E-52 T 11-10-2018 VSVS12_00818 e52db9a34fa33d2082d27f9835ba0bfc 293 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 168 290 2.0E-32 T 11-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain VSVS12_00818 e52db9a34fa33d2082d27f9835ba0bfc 293 Gene3D G3DSA:1.10.1040.10 167 293 1.2E-38 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VSVS12_02885 172c44b6db02fe4c0a08641ec7d7996e 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 73 9.0E-24 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02885 172c44b6db02fe4c0a08641ec7d7996e 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 73 6.2E-38 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02885 172c44b6db02fe4c0a08641ec7d7996e 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 11-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02885 172c44b6db02fe4c0a08641ec7d7996e 75 Pfam PF01084 Ribosomal protein S18 19 68 2.8E-25 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02885 172c44b6db02fe4c0a08641ec7d7996e 75 Gene3D G3DSA:4.10.640.10 20 75 7.8E-29 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02885 172c44b6db02fe4c0a08641ec7d7996e 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.42 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02885 172c44b6db02fe4c0a08641ec7d7996e 75 SUPERFAMILY SSF46911 3 74 2.49E-29 T 11-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02885 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.6E-18 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02885 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.6E-18 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02885 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.6E-18 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02885 172c44b6db02fe4c0a08641ec7d7996e 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.6E-18 T 11-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02610 56f01bdbeba7f677ec637be0a87b9958 519 PRINTS PR01607 Apyrase family signature 29 47 2.1E-21 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VSVS12_02610 56f01bdbeba7f677ec637be0a87b9958 519 PRINTS PR01607 Apyrase family signature 272 292 2.1E-21 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VSVS12_02610 56f01bdbeba7f677ec637be0a87b9958 519 PRINTS PR01607 Apyrase family signature 386 409 2.1E-21 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VSVS12_02610 56f01bdbeba7f677ec637be0a87b9958 519 PRINTS PR01607 Apyrase family signature 455 474 2.1E-21 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VSVS12_02610 56f01bdbeba7f677ec637be0a87b9958 519 PRINTS PR01607 Apyrase family signature 242 265 2.1E-21 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VSVS12_02610 56f01bdbeba7f677ec637be0a87b9958 519 SUPERFAMILY SSF56300 25 332 1.14E-66 T 11-10-2018 VSVS12_02610 56f01bdbeba7f677ec637be0a87b9958 519 Pfam PF00149 Calcineurin-like phosphoesterase 32 257 4.5E-10 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VSVS12_02610 56f01bdbeba7f677ec637be0a87b9958 519 Gene3D G3DSA:3.60.21.10 26 336 7.9E-79 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like VSVS12_02610 56f01bdbeba7f677ec637be0a87b9958 519 Pfam PF02872 5'-nucleotidase, C-terminal domain 339 481 6.3E-43 T 11-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VSVS12_02610 56f01bdbeba7f677ec637be0a87b9958 519 SUPERFAMILY SSF55816 333 516 1.14E-51 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VSVS12_02610 56f01bdbeba7f677ec637be0a87b9958 519 Gene3D G3DSA:3.90.780.10 337 517 3.3E-52 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VSVS12_00804 1d6c8061278d06e372fed1ac48180fd7 267 SUPERFAMILY SSF56655 1 259 7.98E-83 T 11-10-2018 VSVS12_00804 1d6c8061278d06e372fed1ac48180fd7 267 Pfam PF00459 Inositol monophosphatase family 2 259 1.9E-69 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VSVS12_00804 1d6c8061278d06e372fed1ac48180fd7 267 Gene3D G3DSA:3.40.190.80 142 266 9.6E-37 T 11-10-2018 VSVS12_00804 1d6c8061278d06e372fed1ac48180fd7 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 11-10-2018 IPR020583 Inositol monophosphatase, metal-binding site VSVS12_00804 1d6c8061278d06e372fed1ac48180fd7 267 Gene3D G3DSA:3.30.540.10 1 140 2.7E-50 T 11-10-2018 VSVS12_00804 1d6c8061278d06e372fed1ac48180fd7 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 8.3E-58 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VSVS12_00804 1d6c8061278d06e372fed1ac48180fd7 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 8.3E-58 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VSVS12_00804 1d6c8061278d06e372fed1ac48180fd7 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 8.3E-58 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VSVS12_00804 1d6c8061278d06e372fed1ac48180fd7 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 8.3E-58 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VSVS12_00804 1d6c8061278d06e372fed1ac48180fd7 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 8.3E-58 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VSVS12_00804 1d6c8061278d06e372fed1ac48180fd7 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 8.3E-58 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VSVS12_00804 1d6c8061278d06e372fed1ac48180fd7 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 11-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 VSVS12_00804 1d6c8061278d06e372fed1ac48180fd7 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 7.5E-33 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VSVS12_00804 1d6c8061278d06e372fed1ac48180fd7 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 7.5E-33 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VSVS12_00804 1d6c8061278d06e372fed1ac48180fd7 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 7.5E-33 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VSVS12_00804 1d6c8061278d06e372fed1ac48180fd7 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 7.5E-33 T 11-10-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 VSVS12_03875 b0c946115e7179431753f6c2a8102d22 460 PIRSF PIRSF000204 1 460 1.4E-236 T 11-10-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 VSVS12_03875 b0c946115e7179431753f6c2a8102d22 460 SUPERFAMILY SSF52467 287 460 1.76E-80 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VSVS12_03875 b0c946115e7179431753f6c2a8102d22 460 Gene3D G3DSA:3.40.50.1220 284 460 2.4E-90 T 11-10-2018 VSVS12_03875 b0c946115e7179431753f6c2a8102d22 460 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 458 1.4E-203 T 11-10-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 VSVS12_02366 a31dbd45e0314c6ba843a63339285e44 237 SUPERFAMILY SSF46548 106 234 1.05E-39 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VSVS12_02366 a31dbd45e0314c6ba843a63339285e44 237 SUPERFAMILY SSF54292 2 105 7.36E-29 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VSVS12_02366 a31dbd45e0314c6ba843a63339285e44 237 Gene3D G3DSA:3.10.20.30 1 105 4.0E-32 T 11-10-2018 IPR012675 Beta-grasp domain superfamily VSVS12_02366 a31dbd45e0314c6ba843a63339285e44 237 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 6 110 1.7E-28 T 11-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 VSVS12_02366 a31dbd45e0314c6ba843a63339285e44 237 Pfam PF13534 4Fe-4S dicluster domain 147 220 1.5E-10 T 11-10-2018 VSVS12_02366 a31dbd45e0314c6ba843a63339285e44 237 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 9 229 1.8E-84 T 11-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 VSVS12_02366 a31dbd45e0314c6ba843a63339285e44 237 Gene3D G3DSA:1.10.1060.10 106 237 1.3E-55 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VSVS12_02366 a31dbd45e0314c6ba843a63339285e44 237 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 148 159 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VSVS12_01721 098931ca2d97fd48b4c09ff109f65fb4 483 Gene3D G3DSA:3.40.50.2300 14 145 6.2E-31 T 11-10-2018 VSVS12_01721 098931ca2d97fd48b4c09ff109f65fb4 483 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 179 192 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VSVS12_01721 098931ca2d97fd48b4c09ff109f65fb4 483 Pfam PF02954 Bacterial regulatory protein, Fis family 433 474 2.2E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VSVS12_01721 098931ca2d97fd48b4c09ff109f65fb4 483 Pfam PF00158 Sigma-54 interaction domain 155 320 2.4E-67 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VSVS12_01721 098931ca2d97fd48b4c09ff109f65fb4 483 Gene3D G3DSA:1.10.10.60 422 473 2.2E-12 T 11-10-2018 VSVS12_01721 098931ca2d97fd48b4c09ff109f65fb4 483 Gene3D G3DSA:1.10.8.60 325 389 5.8E-18 T 11-10-2018 VSVS12_01721 098931ca2d97fd48b4c09ff109f65fb4 483 SUPERFAMILY SSF52540 155 386 5.52E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01721 098931ca2d97fd48b4c09ff109f65fb4 483 Pfam PF00072 Response regulator receiver domain 18 127 1.9E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_01721 098931ca2d97fd48b4c09ff109f65fb4 483 SMART SM00448 16 127 8.6E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_01721 098931ca2d97fd48b4c09ff109f65fb4 483 SUPERFAMILY SSF46689 427 475 9.41E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_01721 098931ca2d97fd48b4c09ff109f65fb4 483 SUPERFAMILY SSF52172 16 199 1.57E-37 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_01721 098931ca2d97fd48b4c09ff109f65fb4 483 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 367 376 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VSVS12_01721 098931ca2d97fd48b4c09ff109f65fb4 483 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 240 255 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VSVS12_01721 098931ca2d97fd48b4c09ff109f65fb4 483 SMART SM00382 175 318 1.1E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_01721 098931ca2d97fd48b4c09ff109f65fb4 483 Gene3D G3DSA:3.40.50.300 146 324 3.4E-63 T 11-10-2018 VSVS12_02437 60b8a362d805a5e524a67432178699c7 422 Gene3D G3DSA:3.90.1150.10 289 422 2.3E-51 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VSVS12_02437 60b8a362d805a5e524a67432178699c7 422 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 3 420 6.1E-198 T 11-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 VSVS12_02437 60b8a362d805a5e524a67432178699c7 422 Gene3D G3DSA:3.40.640.10 1 285 2.8E-100 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VSVS12_02437 60b8a362d805a5e524a67432178699c7 422 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 196 210 - T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VSVS12_02437 60b8a362d805a5e524a67432178699c7 422 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 420 4.2E-140 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VSVS12_02437 60b8a362d805a5e524a67432178699c7 422 PIRSF PIRSF001434 1 422 2.8E-128 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VSVS12_02437 60b8a362d805a5e524a67432178699c7 422 SUPERFAMILY SSF53383 1 421 3.86E-127 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VSVS12_01731 52783edfbb160a0ef5692e2b42b3fd1d 677 SMART SM00283 414 675 4.7E-39 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_01731 52783edfbb160a0ef5692e2b42b3fd1d 677 SUPERFAMILY SSF58104 367 676 9.68E-59 T 11-10-2018 VSVS12_01731 52783edfbb160a0ef5692e2b42b3fd1d 677 Gene3D G3DSA:1.10.287.950 349 677 2.7E-59 T 11-10-2018 VSVS12_01731 52783edfbb160a0ef5692e2b42b3fd1d 677 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 328 348 1.8E-18 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VSVS12_01731 52783edfbb160a0ef5692e2b42b3fd1d 677 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 541 570 1.8E-18 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VSVS12_01731 52783edfbb160a0ef5692e2b42b3fd1d 677 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 512 539 1.8E-18 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VSVS12_01731 52783edfbb160a0ef5692e2b42b3fd1d 677 SMART SM00304 347 399 6.4E-5 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_01731 52783edfbb160a0ef5692e2b42b3fd1d 677 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 486 640 6.4E-37 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_02069 47fb9c962ef87a8cd742e98424ef7bd5 373 Gene3D G3DSA:2.40.30.10 291 373 4.6E-34 T 11-10-2018 VSVS12_02069 47fb9c962ef87a8cd742e98424ef7bd5 373 Gene3D G3DSA:3.40.50.620 1 218 1.2E-94 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VSVS12_02069 47fb9c962ef87a8cd742e98424ef7bd5 373 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 11 370 39.687 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 VSVS12_02069 47fb9c962ef87a8cd742e98424ef7bd5 373 Gene3D G3DSA:2.30.30.280 220 289 9.0E-27 T 11-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 VSVS12_02069 47fb9c962ef87a8cd742e98424ef7bd5 373 SUPERFAMILY SSF52402 9 251 1.5E-56 T 11-10-2018 VSVS12_02069 47fb9c962ef87a8cd742e98424ef7bd5 373 Pfam PF03054 tRNA methyl transferase 11 369 9.5E-143 T 11-10-2018 VSVS12_02069 47fb9c962ef87a8cd742e98424ef7bd5 373 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 11 369 3.4E-151 T 11-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 VSVS12_02928 66600b60535dc4fb5dd80e783c67c5a8 510 PIRSF PIRSF001492 1 510 2.0E-201 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VSVS12_02928 66600b60535dc4fb5dd80e783c67c5a8 510 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 83 297 3.0E-79 T 11-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VSVS12_02928 66600b60535dc4fb5dd80e783c67c5a8 510 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 5 510 49.246 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VSVS12_02928 66600b60535dc4fb5dd80e783c67c5a8 510 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 5 508 3.5E-226 T 11-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VSVS12_02928 66600b60535dc4fb5dd80e783c67c5a8 510 SUPERFAMILY SSF53649 4 509 1.83E-76 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VSVS12_02928 66600b60535dc4fb5dd80e783c67c5a8 510 SUPERFAMILY SSF64158 78 308 2.75E-81 T 11-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VSVS12_02928 66600b60535dc4fb5dd80e783c67c5a8 510 Gene3D G3DSA:3.40.720.10 6 507 4.3E-209 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VSVS12_02928 66600b60535dc4fb5dd80e783c67c5a8 510 Pfam PF01676 Metalloenzyme superfamily 5 498 2.7E-80 T 11-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 VSVS12_02928 66600b60535dc4fb5dd80e783c67c5a8 510 Gene3D G3DSA:3.40.1450.10 78 310 4.3E-209 T 11-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 VSVS12_02897 71df15c31c341cc43cd1f05c37524045 242 Pfam PF13309 HTH domain 174 231 1.8E-18 T 11-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain VSVS12_02897 71df15c31c341cc43cd1f05c37524045 242 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 30 143 5.0E-61 T 11-10-2018 IPR013559 YheO-like VSVS12_02897 71df15c31c341cc43cd1f05c37524045 242 Pfam PF08348 YheO-like PAS domain 31 139 2.3E-35 T 11-10-2018 IPR013559 YheO-like VSVS12_03497 a4201b966a6c972e32c0f775160ccb4e 478 Pfam PF06114 IrrE N-terminal-like domain 182 298 2.9E-5 T 11-10-2018 IPR010359 IrrE N-terminal-like domain VSVS12_03497 a4201b966a6c972e32c0f775160ccb4e 478 Gene3D G3DSA:1.10.260.40 2 66 1.5E-7 T 11-10-2018 VSVS12_03497 a4201b966a6c972e32c0f775160ccb4e 478 Pfam PF12268 Protein of unknown function (DUF3612) 299 473 6.8E-100 T 11-10-2018 IPR022055 Protein of unknown function DUF3612 VSVS12_03497 a4201b966a6c972e32c0f775160ccb4e 478 Pfam PF01381 Helix-turn-helix 18 51 3.8E-7 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VSVS12_03497 a4201b966a6c972e32c0f775160ccb4e 478 SUPERFAMILY SSF47413 18 56 1.94E-7 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VSVS12_01870 49b920d12f80dfd6f90818988fe8f6e5 446 Pfam PF02378 Phosphotransferase system, EIIC 32 352 1.5E-49 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VSVS12_01870 49b920d12f80dfd6f90818988fe8f6e5 446 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 16 425 7.6E-113 T 11-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 VSVS12_01870 49b920d12f80dfd6f90818988fe8f6e5 446 PIRSF PIRSF006351 5 435 3.6E-130 T 11-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 VSVS12_04098 84b515a0a11f350a92b1329d230945e4 328 SMART SM00354 1 71 9.8E-36 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VSVS12_04098 84b515a0a11f350a92b1329d230945e4 328 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 11-10-2018 VSVS12_04098 84b515a0a11f350a92b1329d230945e4 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.1E-6 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VSVS12_04098 84b515a0a11f350a92b1329d230945e4 328 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.1E-6 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VSVS12_04098 84b515a0a11f350a92b1329d230945e4 328 Pfam PF13377 Periplasmic binding protein-like domain 171 328 4.0E-22 T 11-10-2018 VSVS12_04098 84b515a0a11f350a92b1329d230945e4 328 SUPERFAMILY SSF47413 1 60 5.04E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VSVS12_04098 84b515a0a11f350a92b1329d230945e4 328 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 1.0E-19 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VSVS12_04098 84b515a0a11f350a92b1329d230945e4 328 SUPERFAMILY SSF53822 58 315 3.14E-55 T 11-10-2018 IPR028082 Periplasmic binding protein-like I VSVS12_04098 84b515a0a11f350a92b1329d230945e4 328 Gene3D G3DSA:1.10.260.40 2 59 7.6E-21 T 11-10-2018 VSVS12_04098 84b515a0a11f350a92b1329d230945e4 328 Gene3D G3DSA:3.40.50.2300 164 286 3.0E-58 T 11-10-2018 VSVS12_04098 84b515a0a11f350a92b1329d230945e4 328 Gene3D G3DSA:3.40.50.2300 65 308 3.0E-58 T 11-10-2018 VSVS12_02331 ba0cf68e24e5b7eff26e10ff6104e86a 228 SUPERFAMILY SSF55166 24 178 2.62E-19 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VSVS12_02331 ba0cf68e24e5b7eff26e10ff6104e86a 228 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 28 179 2.6E-34 T 11-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 VSVS12_02331 ba0cf68e24e5b7eff26e10ff6104e86a 228 Gene3D G3DSA:3.30.1380.10 2 198 3.9E-33 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VSVS12_02615 b11dc07ff1b75820a524554919c2ea90 711 SUPERFAMILY SSF54211 5 145 8.6E-49 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VSVS12_02615 b11dc07ff1b75820a524554919c2ea90 711 SMART SM00322 553 618 6.4E-11 T 11-10-2018 IPR004087 K Homology domain GO:0003676 VSVS12_02615 b11dc07ff1b75820a524554919c2ea90 711 SUPERFAMILY SSF54791 553 630 9.1E-16 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 VSVS12_02615 b11dc07ff1b75820a524554919c2ea90 711 Gene3D G3DSA:3.30.230.70 2 229 1.3E-77 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VSVS12_02615 b11dc07ff1b75820a524554919c2ea90 711 SUPERFAMILY SSF46915 239 321 3.14E-19 T 11-10-2018 IPR036456 Polyribonucleotide nucleotidyltransferase, RNA-binding domain superfamily GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VSVS12_02615 b11dc07ff1b75820a524554919c2ea90 711 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 4 694 30.11 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VSVS12_02615 b11dc07ff1b75820a524554919c2ea90 711 SUPERFAMILY SSF55666 146 236 6.15E-29 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VSVS12_02615 b11dc07ff1b75820a524554919c2ea90 711 SUPERFAMILY SSF50249 608 694 6.51E-22 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_02615 b11dc07ff1b75820a524554919c2ea90 711 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 11 692 0.0 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VSVS12_02615 b11dc07ff1b75820a524554919c2ea90 711 Pfam PF03725 3' exoribonuclease family, domain 2 148 211 2.3E-13 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VSVS12_02615 b11dc07ff1b75820a524554919c2ea90 711 Pfam PF01138 3' exoribonuclease family, domain 1 325 457 1.2E-20 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VSVS12_02615 b11dc07ff1b75820a524554919c2ea90 711 Pfam PF01138 3' exoribonuclease family, domain 1 17 145 1.0E-18 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VSVS12_02615 b11dc07ff1b75820a524554919c2ea90 711 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 242 321 1.1E-23 T 11-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VSVS12_02615 b11dc07ff1b75820a524554919c2ea90 711 SUPERFAMILY SSF55666 451 550 9.56E-28 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VSVS12_02615 b11dc07ff1b75820a524554919c2ea90 711 SUPERFAMILY SSF54211 294 489 5.57E-46 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VSVS12_02615 b11dc07ff1b75820a524554919c2ea90 711 Gene3D G3DSA:2.40.50.140 623 694 8.1E-30 T 11-10-2018 VSVS12_02615 b11dc07ff1b75820a524554919c2ea90 711 Pfam PF00575 S1 RNA binding domain 620 691 6.2E-19 T 11-10-2018 IPR003029 S1 domain GO:0003676 VSVS12_02615 b11dc07ff1b75820a524554919c2ea90 711 SMART SM00316 621 691 5.2E-26 T 11-10-2018 IPR022967 RNA-binding domain, S1 VSVS12_02615 b11dc07ff1b75820a524554919c2ea90 711 Gene3D G3DSA:3.30.230.70 235 550 1.0E-112 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VSVS12_02615 b11dc07ff1b75820a524554919c2ea90 711 PIRSF PIRSF005499 2 711 5.1E-295 T 11-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 VSVS12_02615 b11dc07ff1b75820a524554919c2ea90 711 Gene3D G3DSA:3.30.1370.10 551 622 5.3E-18 T 11-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 VSVS12_02615 b11dc07ff1b75820a524554919c2ea90 711 Pfam PF00013 KH domain 559 615 1.5E-8 T 11-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 VSVS12_02154 781ff3d6a69c779c43fa8d9d67ba8804 820 Gene3D G3DSA:3.40.228.10 179 641 3.8E-240 T 11-10-2018 VSVS12_02154 781ff3d6a69c779c43fa8d9d67ba8804 820 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 29 3.5E-4 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VSVS12_02154 781ff3d6a69c779c43fa8d9d67ba8804 820 Gene3D G3DSA:3.90.55.10 82 615 3.8E-240 T 11-10-2018 VSVS12_02154 781ff3d6a69c779c43fa8d9d67ba8804 820 TIGRFAM TIGR02164 torA: trimethylamine-N-oxide reductase TorA 1 819 0.0 T 11-10-2018 IPR011887 Trimethylamine-N-oxide reductase TorA GO:0030151|GO:0042597|GO:0050626 VSVS12_02154 781ff3d6a69c779c43fa8d9d67ba8804 820 SUPERFAMILY SSF50692 669 817 1.24E-41 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily VSVS12_02154 781ff3d6a69c779c43fa8d9d67ba8804 820 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 503 520 - T 11-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 VSVS12_02154 781ff3d6a69c779c43fa8d9d67ba8804 820 SUPERFAMILY SSF53706 40 660 7.85E-165 T 11-10-2018 VSVS12_02154 781ff3d6a69c779c43fa8d9d67ba8804 820 Pfam PF01568 Molydopterin dinucleotide binding domain 676 796 1.2E-23 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VSVS12_02154 781ff3d6a69c779c43fa8d9d67ba8804 820 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 716 743 - T 11-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 VSVS12_02154 781ff3d6a69c779c43fa8d9d67ba8804 820 Gene3D G3DSA:3.40.50.740 87 569 3.8E-240 T 11-10-2018 VSVS12_02154 781ff3d6a69c779c43fa8d9d67ba8804 820 Pfam PF00384 Molybdopterin oxidoreductase 87 560 6.2E-77 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VSVS12_02154 781ff3d6a69c779c43fa8d9d67ba8804 820 Gene3D G3DSA:2.40.40.20 649 813 4.4E-46 T 11-10-2018 VSVS12_01072 770e1cbd81c84cb19dd066939738dc85 252 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 65 80 - T 11-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 VSVS12_01072 770e1cbd81c84cb19dd066939738dc85 252 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 5 251 8.1E-110 T 11-10-2018 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|MetaCyc: PWY-5532 VSVS12_01072 770e1cbd81c84cb19dd066939738dc85 252 Pfam PF01048 Phosphorylase superfamily 20 246 1.8E-39 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VSVS12_01072 770e1cbd81c84cb19dd066939738dc85 252 SUPERFAMILY SSF53167 5 249 1.15E-71 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 VSVS12_01072 770e1cbd81c84cb19dd066939738dc85 252 Gene3D G3DSA:3.40.50.1580 1 252 2.9E-80 T 11-10-2018 VSVS12_03620 ab9eefa6d80857fe5a2e1dd6639ff994 144 Pfam PF13778 Domain of unknown function (DUF4174) 23 134 3.1E-20 T 11-10-2018 IPR025232 Domain of unknown function DUF4174 VSVS12_02865 8055b7ac89249bd79ccd70c671cd1189 115 Gene3D G3DSA:3.10.490.10 4 115 5.7E-39 T 11-10-2018 VSVS12_02865 8055b7ac89249bd79ccd70c671cd1189 115 SUPERFAMILY SSF110857 2 114 3.14E-32 T 11-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily VSVS12_02865 8055b7ac89249bd79ccd70c671cd1189 115 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 5 112 1.1E-26 T 11-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like VSVS12_03198 5e6be3271f9c54959141d5f9c556d334 214 SMART SM00857 3 134 2.8E-8 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VSVS12_03198 5e6be3271f9c54959141d5f9c556d334 214 Pfam PF00239 Resolvase, N terminal domain 4 137 8.2E-16 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VSVS12_03198 5e6be3271f9c54959141d5f9c556d334 214 Pfam PF13384 Homeodomain-like domain 155 200 5.7E-6 T 11-10-2018 VSVS12_03198 5e6be3271f9c54959141d5f9c556d334 214 SUPERFAMILY SSF53041 1 137 2.88E-16 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 VSVS12_03198 5e6be3271f9c54959141d5f9c556d334 214 Gene3D G3DSA:3.40.50.1390 3 141 3.3E-13 T 11-10-2018 VSVS12_03640 6978faee7166143f35f4c7c9b61ca790 442 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 6 439 4.3E-142 T 11-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VSVS12_03640 6978faee7166143f35f4c7c9b61ca790 442 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 373 1.9E-145 T 11-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VSVS12_03640 6978faee7166143f35f4c7c9b61ca790 442 PIRSF PIRSF004539 1 441 9.5E-178 T 11-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VSVS12_03033 857398312ca46a9681e38fbc7e400f63 172 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 132 172 9.4E-21 T 11-10-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VSVS12_03033 857398312ca46a9681e38fbc7e400f63 172 Gene3D G3DSA:2.30.110.10 1 172 2.4E-66 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VSVS12_03033 857398312ca46a9681e38fbc7e400f63 172 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 3 79 1.0E-21 T 11-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VSVS12_03033 857398312ca46a9681e38fbc7e400f63 172 PIRSF PIRSF000190 1 172 4.6E-70 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VSVS12_03033 857398312ca46a9681e38fbc7e400f63 172 SUPERFAMILY SSF50475 3 172 2.06E-56 T 11-10-2018 VSVS12_03033 857398312ca46a9681e38fbc7e400f63 172 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 142 155 - T 11-10-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VSVS12_03033 857398312ca46a9681e38fbc7e400f63 172 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 3 172 8.9E-73 T 11-10-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VSVS12_04297 5e6621d0ce4b10212e05547c5d39e59e 146 SUPERFAMILY SSF46785 1 60 2.17E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_04297 5e6621d0ce4b10212e05547c5d39e59e 146 Gene3D G3DSA:3.30.70.920 55 137 3.2E-19 T 11-10-2018 VSVS12_04297 5e6621d0ce4b10212e05547c5d39e59e 146 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 8.8E-16 T 11-10-2018 VSVS12_04297 5e6621d0ce4b10212e05547c5d39e59e 146 Pfam PF01037 Lrp/AsnC ligand binding domain 67 139 1.9E-17 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VSVS12_04297 5e6621d0ce4b10212e05547c5d39e59e 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 2.6E-14 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VSVS12_04297 5e6621d0ce4b10212e05547c5d39e59e 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 2.6E-14 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VSVS12_04297 5e6621d0ce4b10212e05547c5d39e59e 146 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 2.6E-14 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VSVS12_04297 5e6621d0ce4b10212e05547c5d39e59e 146 SMART SM00344 1 110 2.5E-34 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VSVS12_04297 5e6621d0ce4b10212e05547c5d39e59e 146 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 11-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VSVS12_04297 5e6621d0ce4b10212e05547c5d39e59e 146 Gene3D G3DSA:1.10.10.10 1 54 2.2E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_04297 5e6621d0ce4b10212e05547c5d39e59e 146 SUPERFAMILY SSF54909 63 144 3.22E-17 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel VSVS12_03905 35642375d33dea81e8df7217adc43769 330 Pfam PF07478 D-ala D-ala ligase C-terminus 126 324 9.9E-53 T 11-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VSVS12_03905 35642375d33dea81e8df7217adc43769 330 SUPERFAMILY SSF52440 3 115 1.53E-26 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VSVS12_03905 35642375d33dea81e8df7217adc43769 330 Pfam PF01820 D-ala D-ala ligase N-terminus 6 106 4.5E-21 T 11-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VSVS12_03905 35642375d33dea81e8df7217adc43769 330 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 330 32.923 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VSVS12_03905 35642375d33dea81e8df7217adc43769 330 PIRSF PIRSF039102 1 330 1.2E-77 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VSVS12_03905 35642375d33dea81e8df7217adc43769 330 Gene3D G3DSA:3.30.470.20 105 320 5.8E-83 T 11-10-2018 VSVS12_03905 35642375d33dea81e8df7217adc43769 330 Gene3D G3DSA:3.30.1490.20 132 199 5.8E-83 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VSVS12_03905 35642375d33dea81e8df7217adc43769 330 Gene3D G3DSA:3.40.50.20 19 325 5.8E-83 T 11-10-2018 VSVS12_03905 35642375d33dea81e8df7217adc43769 330 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 83 94 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VSVS12_03905 35642375d33dea81e8df7217adc43769 330 SUPERFAMILY SSF56059 116 326 1.28E-43 T 11-10-2018 VSVS12_03905 35642375d33dea81e8df7217adc43769 330 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 272 300 - T 11-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VSVS12_03905 35642375d33dea81e8df7217adc43769 330 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 6 328 3.8E-101 T 11-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VSVS12_00187 203c998e594a02776467102e9627e37f 288 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 288 37.389 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VSVS12_00187 203c998e594a02776467102e9627e37f 288 SUPERFAMILY SSF52943 2 288 3.01E-98 T 11-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VSVS12_00187 203c998e594a02776467102e9627e37f 288 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 274 287 - T 11-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VSVS12_00187 203c998e594a02776467102e9627e37f 288 Gene3D G3DSA:1.10.287.80 6 284 9.6E-113 T 11-10-2018 VSVS12_00187 203c998e594a02776467102e9627e37f 288 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 3.2E-37 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VSVS12_00187 203c998e594a02776467102e9627e37f 288 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 3.2E-37 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VSVS12_00187 203c998e594a02776467102e9627e37f 288 PRINTS PR00126 ATP synthase gamma subunit signature 235 254 3.2E-37 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VSVS12_00187 203c998e594a02776467102e9627e37f 288 PRINTS PR00126 ATP synthase gamma subunit signature 266 287 3.2E-37 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VSVS12_00187 203c998e594a02776467102e9627e37f 288 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 288 9.1E-114 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VSVS12_00187 203c998e594a02776467102e9627e37f 288 Gene3D G3DSA:3.40.1380.10 61 207 9.6E-113 T 11-10-2018 VSVS12_00187 203c998e594a02776467102e9627e37f 288 Pfam PF00231 ATP synthase 5 287 7.8E-100 T 11-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VSVS12_02739 01bf06389976d94c74805112c5503e20 172 PIRSF PIRSF006160 1 162 1.4E-65 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VSVS12_02739 01bf06389976d94c74805112c5503e20 172 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 140 1.0E-70 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VSVS12_02739 01bf06389976d94c74805112c5503e20 172 Gene3D G3DSA:3.30.1360.80 1 172 1.4E-71 T 11-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VSVS12_02739 01bf06389976d94c74805112c5503e20 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 6.2E-52 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VSVS12_02739 01bf06389976d94c74805112c5503e20 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 6.2E-52 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VSVS12_02739 01bf06389976d94c74805112c5503e20 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 6.2E-52 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VSVS12_02739 01bf06389976d94c74805112c5503e20 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 6.2E-52 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VSVS12_02739 01bf06389976d94c74805112c5503e20 172 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 6.2E-52 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VSVS12_02739 01bf06389976d94c74805112c5503e20 172 SUPERFAMILY SSF63411 4 162 4.76E-65 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VSVS12_02739 01bf06389976d94c74805112c5503e20 172 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 34.888 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VSVS12_02739 01bf06389976d94c74805112c5503e20 172 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 154 4.6E-60 T 11-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VSVS12_02203 b538be97f5c84a46702b041b8e21a7f5 164 SUPERFAMILY SSF50891 1 162 2.05E-57 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily VSVS12_02203 b538be97f5c84a46702b041b8e21a7f5 164 PIRSF PIRSF001467 1 163 1.6E-26 T 11-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 VSVS12_02203 b538be97f5c84a46702b041b8e21a7f5 164 Gene3D G3DSA:2.40.100.10 1 164 7.8E-65 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily VSVS12_02203 b538be97f5c84a46702b041b8e21a7f5 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 160 1.4E-47 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VSVS12_02203 b538be97f5c84a46702b041b8e21a7f5 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 1.1E-10 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VSVS12_02203 b538be97f5c84a46702b041b8e21a7f5 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 1.1E-10 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VSVS12_02203 b538be97f5c84a46702b041b8e21a7f5 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 1.1E-10 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VSVS12_02203 b538be97f5c84a46702b041b8e21a7f5 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 11-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 VSVS12_01248 adb761fc1e93bdefc06ff7287d5b3951 255 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VSVS12_01248 adb761fc1e93bdefc06ff7287d5b3951 255 SUPERFAMILY SSF51556 1 253 8.88E-88 T 11-10-2018 IPR032466 Metal-dependent hydrolase VSVS12_01248 adb761fc1e93bdefc06ff7287d5b3951 255 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VSVS12_01248 adb761fc1e93bdefc06ff7287d5b3951 255 PIRSF PIRSF005902 1 255 1.7E-82 T 11-10-2018 IPR001130 TatD family GO:0016788 VSVS12_01248 adb761fc1e93bdefc06ff7287d5b3951 255 Gene3D G3DSA:3.20.20.140 1 255 2.2E-99 T 11-10-2018 VSVS12_01248 adb761fc1e93bdefc06ff7287d5b3951 255 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 253 8.1E-93 T 11-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 VSVS12_01248 adb761fc1e93bdefc06ff7287d5b3951 255 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 125 135 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VSVS12_01248 adb761fc1e93bdefc06ff7287d5b3951 255 Pfam PF01026 TatD related DNase 3 253 1.6E-79 T 11-10-2018 IPR001130 TatD family GO:0016788 VSVS12_00780 4c1d2591561dc90d138933dca7581676 781 Gene3D G3DSA:3.30.70.270 332 516 1.4E-48 T 11-10-2018 VSVS12_00780 4c1d2591561dc90d138933dca7581676 781 Pfam PF00563 EAL domain 528 753 3.7E-63 T 11-10-2018 IPR001633 EAL domain VSVS12_00780 4c1d2591561dc90d138933dca7581676 781 SMART SM00267 327 505 2.3E-42 T 11-10-2018 IPR000160 GGDEF domain VSVS12_00780 4c1d2591561dc90d138933dca7581676 781 SMART SM00052 515 758 1.9E-74 T 11-10-2018 IPR001633 EAL domain VSVS12_00780 4c1d2591561dc90d138933dca7581676 781 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 337 503 6.3E-33 T 11-10-2018 IPR000160 GGDEF domain VSVS12_00780 4c1d2591561dc90d138933dca7581676 781 SUPERFAMILY SSF141868 521 764 1.31E-67 T 11-10-2018 IPR035919 EAL domain superfamily VSVS12_00780 4c1d2591561dc90d138933dca7581676 781 Pfam PF00990 Diguanylate cyclase, GGDEF domain 339 501 4.6E-38 T 11-10-2018 IPR000160 GGDEF domain VSVS12_00780 4c1d2591561dc90d138933dca7581676 781 SUPERFAMILY SSF55073 343 506 1.73E-37 T 11-10-2018 IPR029787 Nucleotide cyclase VSVS12_00780 4c1d2591561dc90d138933dca7581676 781 Gene3D G3DSA:3.20.20.450 517 771 1.3E-72 T 11-10-2018 IPR035919 EAL domain superfamily VSVS12_00736 8219c2ae3d4ca3bcd185ebacebb6c952 317 Gene3D G3DSA:2.30.130.10 249 312 1.7E-23 T 11-10-2018 IPR036974 PUA domain superfamily GO:0003723 VSVS12_00736 8219c2ae3d4ca3bcd185ebacebb6c952 317 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 10 218 5.0E-86 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 VSVS12_00736 8219c2ae3d4ca3bcd185ebacebb6c952 317 Gene3D G3DSA:3.30.2350.10 1 248 2.6E-94 T 11-10-2018 VSVS12_00736 8219c2ae3d4ca3bcd185ebacebb6c952 317 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 10 308 18.734 T 11-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 VSVS12_00736 8219c2ae3d4ca3bcd185ebacebb6c952 317 SUPERFAMILY SSF88697 250 310 1.79E-12 T 11-10-2018 IPR015947 PUA-like superfamily VSVS12_00736 8219c2ae3d4ca3bcd185ebacebb6c952 317 SUPERFAMILY SSF55120 9 247 1.06E-82 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VSVS12_00736 8219c2ae3d4ca3bcd185ebacebb6c952 317 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 247 1.4E-24 T 11-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 VSVS12_00736 8219c2ae3d4ca3bcd185ebacebb6c952 317 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 251 308 2.3E-17 T 11-10-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 VSVS12_00736 8219c2ae3d4ca3bcd185ebacebb6c952 317 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 32 179 4.9E-56 T 11-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 VSVS12_03545 9d4adc3d16b72a12226b9f629bd9e57c 234 SMART SM00448 7 120 5.1E-18 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_03545 9d4adc3d16b72a12226b9f629bd9e57c 234 Pfam PF00072 Response regulator receiver domain 10 120 4.6E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_03545 9d4adc3d16b72a12226b9f629bd9e57c 234 PIRSF PIRSF006171 5 233 7.9E-72 T 11-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 VSVS12_03545 9d4adc3d16b72a12226b9f629bd9e57c 234 SUPERFAMILY SSF52172 5 132 1.57E-28 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_03545 9d4adc3d16b72a12226b9f629bd9e57c 234 Gene3D G3DSA:3.40.50.2300 4 139 1.1E-24 T 11-10-2018 VSVS12_03458 fab854933db1ffb67cde1f4cc559c343 392 SUPERFAMILY SSF51905 107 312 1.68E-33 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_03458 fab854933db1ffb67cde1f4cc559c343 392 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 292 4.0E-48 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VSVS12_03458 fab854933db1ffb67cde1f4cc559c343 392 Gene3D G3DSA:3.50.50.60 113 250 4.5E-72 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_03458 fab854933db1ffb67cde1f4cc559c343 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 263 285 2.4E-18 T 11-10-2018 VSVS12_03458 fab854933db1ffb67cde1f4cc559c343 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 150 168 2.4E-18 T 11-10-2018 VSVS12_03458 fab854933db1ffb67cde1f4cc559c343 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 238 254 2.4E-18 T 11-10-2018 VSVS12_03458 fab854933db1ffb67cde1f4cc559c343 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 105 123 2.4E-18 T 11-10-2018 VSVS12_03458 fab854933db1ffb67cde1f4cc559c343 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 2.4E-18 T 11-10-2018 VSVS12_03458 fab854933db1ffb67cde1f4cc559c343 392 Gene3D G3DSA:3.30.390.120 323 384 4.5E-6 T 11-10-2018 VSVS12_03458 fab854933db1ffb67cde1f4cc559c343 392 Gene3D G3DSA:3.50.50.60 7 286 4.5E-72 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_03458 fab854933db1ffb67cde1f4cc559c343 392 SUPERFAMILY SSF51905 5 164 2.14E-9 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_03458 fab854933db1ffb67cde1f4cc559c343 392 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 278 285 4.5E-13 T 11-10-2018 VSVS12_03458 fab854933db1ffb67cde1f4cc559c343 392 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 4.5E-13 T 11-10-2018 VSVS12_03458 fab854933db1ffb67cde1f4cc559c343 392 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 239 253 4.5E-13 T 11-10-2018 VSVS12_03458 fab854933db1ffb67cde1f4cc559c343 392 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 150 175 4.5E-13 T 11-10-2018 VSVS12_01057 0bf1f69cd33ddb75ab57d456f8fde346 193 PIRSF PIRSF006102 1 193 1.1E-64 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VSVS12_01057 0bf1f69cd33ddb75ab57d456f8fde346 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 6.8E-62 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VSVS12_01057 0bf1f69cd33ddb75ab57d456f8fde346 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 3.0E-90 T 11-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 VSVS12_01057 0bf1f69cd33ddb75ab57d456f8fde346 193 Hamap MF_00459 Ion-translocating oxidoreductase complex subunit A [rsxA]. 2 191 26.372 T 11-10-2018 IPR011293 Ion-translocating oxidoreductase complex, subunit RnfA/RsxA GO:0022900 VSVS12_02589 2d67113953486f778653c6829ef9793e 626 Pfam PF00204 DNA gyrase B 218 384 1.6E-41 T 11-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VSVS12_02589 2d67113953486f778653c6829ef9793e 626 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 626 46.794 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VSVS12_02589 2d67113953486f778653c6829ef9793e 626 Gene3D G3DSA:3.30.565.10 2 215 1.8E-75 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_02589 2d67113953486f778653c6829ef9793e 626 SUPERFAMILY SSF56719 388 619 1.96E-78 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VSVS12_02589 2d67113953486f778653c6829ef9793e 626 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 6.3E-125 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VSVS12_02589 2d67113953486f778653c6829ef9793e 626 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 6.3E-125 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VSVS12_02589 2d67113953486f778653c6829ef9793e 626 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 6.3E-125 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VSVS12_02589 2d67113953486f778653c6829ef9793e 626 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 6.3E-125 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VSVS12_02589 2d67113953486f778653c6829ef9793e 626 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 6.3E-125 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VSVS12_02589 2d67113953486f778653c6829ef9793e 626 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 6.3E-125 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VSVS12_02589 2d67113953486f778653c6829ef9793e 626 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 6.3E-125 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VSVS12_02589 2d67113953486f778653c6829ef9793e 626 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 6.3E-125 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VSVS12_02589 2d67113953486f778653c6829ef9793e 626 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 6.3E-125 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VSVS12_02589 2d67113953486f778653c6829ef9793e 626 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 6.3E-125 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VSVS12_02589 2d67113953486f778653c6829ef9793e 626 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 6.3E-125 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VSVS12_02589 2d67113953486f778653c6829ef9793e 626 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 6.3E-125 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VSVS12_02589 2d67113953486f778653c6829ef9793e 626 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 6.3E-125 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VSVS12_02589 2d67113953486f778653c6829ef9793e 626 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 6.3E-125 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VSVS12_02589 2d67113953486f778653c6829ef9793e 626 Gene3D G3DSA:3.30.230.10 216 389 7.6E-57 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VSVS12_02589 2d67113953486f778653c6829ef9793e 626 PRINTS PR00418 DNA topoisomerase II family signature 109 123 5.9E-57 T 11-10-2018 VSVS12_02589 2d67113953486f778653c6829ef9793e 626 PRINTS PR00418 DNA topoisomerase II family signature 479 495 5.9E-57 T 11-10-2018 VSVS12_02589 2d67113953486f778653c6829ef9793e 626 PRINTS PR00418 DNA topoisomerase II family signature 497 514 5.9E-57 T 11-10-2018 VSVS12_02589 2d67113953486f778653c6829ef9793e 626 PRINTS PR00418 DNA topoisomerase II family signature 414 428 5.9E-57 T 11-10-2018 VSVS12_02589 2d67113953486f778653c6829ef9793e 626 PRINTS PR00418 DNA topoisomerase II family signature 560 576 5.9E-57 T 11-10-2018 VSVS12_02589 2d67113953486f778653c6829ef9793e 626 PRINTS PR00418 DNA topoisomerase II family signature 31 46 5.9E-57 T 11-10-2018 VSVS12_02589 2d67113953486f778653c6829ef9793e 626 PRINTS PR00418 DNA topoisomerase II family signature 266 279 5.9E-57 T 11-10-2018 VSVS12_02589 2d67113953486f778653c6829ef9793e 626 PRINTS PR00418 DNA topoisomerase II family signature 517 529 5.9E-57 T 11-10-2018 VSVS12_02589 2d67113953486f778653c6829ef9793e 626 PRINTS PR00418 DNA topoisomerase II family signature 66 79 5.9E-57 T 11-10-2018 VSVS12_02589 2d67113953486f778653c6829ef9793e 626 SMART SM00433 34 622 3.0E-209 T 11-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VSVS12_02589 2d67113953486f778653c6829ef9793e 626 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 556 618 7.5E-27 T 11-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 VSVS12_02589 2d67113953486f778653c6829ef9793e 626 SUPERFAMILY SSF55874 5 215 7.6E-66 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_02589 2d67113953486f778653c6829ef9793e 626 SMART SM00387 27 173 5.5E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_02589 2d67113953486f778653c6829ef9793e 626 SUPERFAMILY SSF54211 217 382 9.1E-46 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VSVS12_02589 2d67113953486f778653c6829ef9793e 626 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 170 3.6E-16 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_02589 2d67113953486f778653c6829ef9793e 626 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 3 623 0.0 T 11-10-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VSVS12_02589 2d67113953486f778653c6829ef9793e 626 Gene3D G3DSA:3.40.50.670 390 621 5.0E-92 T 11-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VSVS12_02589 2d67113953486f778653c6829ef9793e 626 Pfam PF01751 Toprim domain 413 522 8.9E-12 T 11-10-2018 IPR006171 TOPRIM domain VSVS12_01213 0edd98a648bfdaade948b07d20f2c048 435 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 109 2.8E-29 T 11-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 VSVS12_01213 0edd98a648bfdaade948b07d20f2c048 435 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 228 411 1.6E-34 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VSVS12_01213 0edd98a648bfdaade948b07d20f2c048 435 Gene3D G3DSA:1.10.287.40 1 106 4.9E-20 T 11-10-2018 VSVS12_01213 0edd98a648bfdaade948b07d20f2c048 435 SUPERFAMILY SSF55681 118 429 2.13E-97 T 11-10-2018 VSVS12_01213 0edd98a648bfdaade948b07d20f2c048 435 PIRSF PIRSF001529 1 435 1.7E-185 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VSVS12_01213 0edd98a648bfdaade948b07d20f2c048 435 SUPERFAMILY SSF46589 1 114 4.39E-27 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 VSVS12_01213 0edd98a648bfdaade948b07d20f2c048 435 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 433 40.157 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VSVS12_01213 0edd98a648bfdaade948b07d20f2c048 435 PRINTS PR00981 Seryl-tRNA synthetase signature 327 340 2.1E-33 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VSVS12_01213 0edd98a648bfdaade948b07d20f2c048 435 PRINTS PR00981 Seryl-tRNA synthetase signature 344 360 2.1E-33 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VSVS12_01213 0edd98a648bfdaade948b07d20f2c048 435 PRINTS PR00981 Seryl-tRNA synthetase signature 275 287 2.1E-33 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VSVS12_01213 0edd98a648bfdaade948b07d20f2c048 435 PRINTS PR00981 Seryl-tRNA synthetase signature 287 300 2.1E-33 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VSVS12_01213 0edd98a648bfdaade948b07d20f2c048 435 PRINTS PR00981 Seryl-tRNA synthetase signature 362 378 2.1E-33 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VSVS12_01213 0edd98a648bfdaade948b07d20f2c048 435 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 428 3.1E-171 T 11-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 VSVS12_01213 0edd98a648bfdaade948b07d20f2c048 435 Gene3D G3DSA:3.30.930.10 107 434 8.3E-114 T 11-10-2018 VSVS12_00553 09cf54a4b5c75d4fa3049e8b82d2c44b 242 SMART SM00563 67 182 1.7E-39 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VSVS12_00553 09cf54a4b5c75d4fa3049e8b82d2c44b 242 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 1.5E-40 T 11-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 VSVS12_00553 09cf54a4b5c75d4fa3049e8b82d2c44b 242 SUPERFAMILY SSF69593 4 235 3.4E-54 T 11-10-2018 VSVS12_00553 09cf54a4b5c75d4fa3049e8b82d2c44b 242 Pfam PF01553 Acyltransferase 58 180 8.2E-29 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VSVS12_02017 ace7f336d7d2ef1ce3ab30a5df05728b 188 SUPERFAMILY SSF50249 69 129 1.17E-11 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_02017 ace7f336d7d2ef1ce3ab30a5df05728b 188 SUPERFAMILY SSF50104 1 65 7.82E-11 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily VSVS12_02017 ace7f336d7d2ef1ce3ab30a5df05728b 188 PIRSF PIRSF005901 1 188 7.3E-59 T 11-10-2018 IPR020599 Translation elongation factor P/YeiP VSVS12_02017 ace7f336d7d2ef1ce3ab30a5df05728b 188 SUPERFAMILY SSF50249 131 188 2.23E-14 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_02017 ace7f336d7d2ef1ce3ab30a5df05728b 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 62 4.5E-15 T 11-10-2018 IPR013185 Translation elongation factor, KOW-like VSVS12_02017 ace7f336d7d2ef1ce3ab30a5df05728b 188 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 188 41.795 T 11-10-2018 IPR011897 Translation elongation factor P-like, YeiP VSVS12_02017 ace7f336d7d2ef1ce3ab30a5df05728b 188 SMART SM00841 132 187 3.3E-25 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 VSVS12_02017 ace7f336d7d2ef1ce3ab30a5df05728b 188 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 188 2.6E-92 T 11-10-2018 IPR011897 Translation elongation factor P-like, YeiP VSVS12_02017 ace7f336d7d2ef1ce3ab30a5df05728b 188 Pfam PF09285 Elongation factor P, C-terminal 132 187 6.0E-19 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 VSVS12_02017 ace7f336d7d2ef1ce3ab30a5df05728b 188 Gene3D G3DSA:2.30.30.30 1 65 7.6E-14 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 VSVS12_02017 ace7f336d7d2ef1ce3ab30a5df05728b 188 SMART SM01185 69 124 7.8E-15 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 VSVS12_02017 ace7f336d7d2ef1ce3ab30a5df05728b 188 ProSitePatterns PS01275 Elongation factor P signature. 153 172 - T 11-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site VSVS12_02017 ace7f336d7d2ef1ce3ab30a5df05728b 188 Gene3D G3DSA:2.40.50.140 67 130 3.3E-16 T 11-10-2018 VSVS12_02017 ace7f336d7d2ef1ce3ab30a5df05728b 188 Gene3D G3DSA:2.40.50.140 131 188 1.5E-19 T 11-10-2018 VSVS12_02017 ace7f336d7d2ef1ce3ab30a5df05728b 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 70 123 3.5E-14 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 VSVS12_03805 61ff15edc1dd297816f3cec9ede5de6e 283 SUPERFAMILY SSF46689 228 277 1.08E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_03805 61ff15edc1dd297816f3cec9ede5de6e 283 SUPERFAMILY SSF51215 30 138 3.53E-18 T 11-10-2018 IPR037923 Transcription regulator HTH-like VSVS12_03805 61ff15edc1dd297816f3cec9ede5de6e 283 Pfam PF12833 Helix-turn-helix domain 198 277 3.5E-19 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VSVS12_03805 61ff15edc1dd297816f3cec9ede5de6e 283 Gene3D G3DSA:2.60.120.280 38 142 6.3E-14 T 11-10-2018 VSVS12_03805 61ff15edc1dd297816f3cec9ede5de6e 283 SUPERFAMILY SSF46689 177 226 1.08E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_03805 61ff15edc1dd297816f3cec9ede5de6e 283 Gene3D G3DSA:1.10.10.60 176 280 1.0E-23 T 11-10-2018 VSVS12_03805 61ff15edc1dd297816f3cec9ede5de6e 283 Pfam PF02311 AraC-like ligand binding domain 35 115 2.0E-9 T 11-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VSVS12_03805 61ff15edc1dd297816f3cec9ede5de6e 283 SMART SM00342 192 275 3.1E-25 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VSVS12_00086 5ffee3533ba110a356893b351f7be893 124 Gene3D G3DSA:3.30.1330.40 1 124 1.4E-51 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VSVS12_00086 5ffee3533ba110a356893b351f7be893 124 SUPERFAMILY SSF55298 2 124 1.07E-47 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VSVS12_00086 5ffee3533ba110a356893b351f7be893 124 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 2 123 4.1E-51 T 11-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 VSVS12_00086 5ffee3533ba110a356893b351f7be893 124 Pfam PF01042 Endoribonuclease L-PSP 7 123 7.8E-46 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 VSVS12_00086 5ffee3533ba110a356893b351f7be893 124 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 100 118 - T 11-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 VSVS12_04224 e0eba66554a089b4d38fa55670d01934 231 Pfam PF02104 SURF1 family 2 206 7.1E-27 T 11-10-2018 IPR002994 Surfeit locus 1/Shy1 GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_03671 ce41314f718b5eab91dc753617cf7028 676 SMART SM00052 426 668 6.1E-64 T 11-10-2018 IPR001633 EAL domain VSVS12_03671 ce41314f718b5eab91dc753617cf7028 676 Pfam PF02378 Phosphotransferase system, EIIC 26 322 2.8E-16 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VSVS12_03671 ce41314f718b5eab91dc753617cf7028 676 Gene3D G3DSA:3.20.20.450 427 674 7.5E-67 T 11-10-2018 IPR035919 EAL domain superfamily VSVS12_03671 ce41314f718b5eab91dc753617cf7028 676 SUPERFAMILY SSF141868 433 671 1.57E-65 T 11-10-2018 IPR035919 EAL domain superfamily VSVS12_03671 ce41314f718b5eab91dc753617cf7028 676 Pfam PF00563 EAL domain 433 663 1.8E-58 T 11-10-2018 IPR001633 EAL domain VSVS12_01240 c247c0bd6a74c1a5ddbdf882b114cc44 307 Gene3D G3DSA:3.40.366.10 7 286 1.4E-104 T 11-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 VSVS12_01240 c247c0bd6a74c1a5ddbdf882b114cc44 307 Pfam PF00698 Acyl transferase domain 7 291 6.3E-38 T 11-10-2018 IPR014043 Acyl transferase VSVS12_01240 c247c0bd6a74c1a5ddbdf882b114cc44 307 PIRSF PIRSF000446 1 307 5.1E-133 T 11-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 VSVS12_01240 c247c0bd6a74c1a5ddbdf882b114cc44 307 Gene3D G3DSA:3.30.70.250 125 197 1.4E-104 T 11-10-2018 VSVS12_01240 c247c0bd6a74c1a5ddbdf882b114cc44 307 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 307 1.0E-41 T 11-10-2018 IPR020801 Polyketide synthase, acyl transferase domain VSVS12_01240 c247c0bd6a74c1a5ddbdf882b114cc44 307 SUPERFAMILY SSF52151 4 305 1.83E-78 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VSVS12_01240 c247c0bd6a74c1a5ddbdf882b114cc44 307 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 7.9E-123 T 11-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 VSVS12_01240 c247c0bd6a74c1a5ddbdf882b114cc44 307 SUPERFAMILY SSF55048 128 197 4.05E-18 T 11-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding VSVS12_00338 88d940e2d0b58a729ec0c765216d4416 125 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 76 87 - T 11-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 VSVS12_00338 88d940e2d0b58a729ec0c765216d4416 125 Gene3D G3DSA:1.10.3830.10 10 125 4.9E-39 T 11-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 VSVS12_00338 88d940e2d0b58a729ec0c765216d4416 125 Pfam PF01219 Prokaryotic diacylglycerol kinase 22 123 7.9E-35 T 11-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 VSVS12_02554 168edda66da3cb6a259b80292cbd2c4b 909 Gene3D G3DSA:3.10.450.50 829 908 3.2E-9 T 11-10-2018 VSVS12_02554 168edda66da3cb6a259b80292cbd2c4b 909 SUPERFAMILY SSF52540 418 610 4.58E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02554 168edda66da3cb6a259b80292cbd2c4b 909 Pfam PF07517 SecA DEAD-like domain 7 403 4.4E-131 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 VSVS12_02554 168edda66da3cb6a259b80292cbd2c4b 909 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 19.87 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VSVS12_02554 168edda66da3cb6a259b80292cbd2c4b 909 Pfam PF07516 SecA Wing and Scaffold domain 617 829 2.6E-66 T 11-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 VSVS12_02554 168edda66da3cb6a259b80292cbd2c4b 909 SUPERFAMILY SSF81767 227 369 2.49E-42 T 11-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 VSVS12_02554 168edda66da3cb6a259b80292cbd2c4b 909 SUPERFAMILY SSF81886 620 897 1.96E-84 T 11-10-2018 IPR036266 SecA, Wing/Scaffold superfamily VSVS12_02554 168edda66da3cb6a259b80292cbd2c4b 909 SMART SM00957 6 403 9.6E-300 T 11-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 VSVS12_02554 168edda66da3cb6a259b80292cbd2c4b 909 Gene3D G3DSA:1.10.3060.10 621 828 4.1E-75 T 11-10-2018 VSVS12_02554 168edda66da3cb6a259b80292cbd2c4b 909 Pfam PF02810 SEC-C motif 889 907 2.0E-10 T 11-10-2018 IPR004027 SEC-C motif VSVS12_02554 168edda66da3cb6a259b80292cbd2c4b 909 ProSitePatterns PS01312 SecA family signature. 501 516 - T 11-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 VSVS12_02554 168edda66da3cb6a259b80292cbd2c4b 909 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 816 0.0 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VSVS12_02554 168edda66da3cb6a259b80292cbd2c4b 909 Gene3D G3DSA:3.90.1440.10 229 369 3.7E-173 T 11-10-2018 VSVS12_02554 168edda66da3cb6a259b80292cbd2c4b 909 SUPERFAMILY SSF52540 5 416 1.95E-82 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02554 168edda66da3cb6a259b80292cbd2c4b 909 SMART SM00958 228 359 5.5E-79 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 VSVS12_02554 168edda66da3cb6a259b80292cbd2c4b 909 Gene3D G3DSA:3.40.50.300 22 416 3.7E-173 T 11-10-2018 VSVS12_02554 168edda66da3cb6a259b80292cbd2c4b 909 PRINTS PR00906 SecA protein signature 170 190 2.6E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VSVS12_02554 168edda66da3cb6a259b80292cbd2c4b 909 PRINTS PR00906 SecA protein signature 340 362 2.6E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VSVS12_02554 168edda66da3cb6a259b80292cbd2c4b 909 PRINTS PR00906 SecA protein signature 117 127 2.6E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VSVS12_02554 168edda66da3cb6a259b80292cbd2c4b 909 PRINTS PR00906 SecA protein signature 63 87 2.6E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VSVS12_02554 168edda66da3cb6a259b80292cbd2c4b 909 PRINTS PR00906 SecA protein signature 414 427 2.6E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VSVS12_02554 168edda66da3cb6a259b80292cbd2c4b 909 PRINTS PR00906 SecA protein signature 377 394 2.6E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VSVS12_02554 168edda66da3cb6a259b80292cbd2c4b 909 PRINTS PR00906 SecA protein signature 101 115 2.6E-71 T 11-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 VSVS12_02554 168edda66da3cb6a259b80292cbd2c4b 909 Gene3D G3DSA:3.40.50.300 418 620 1.2E-85 T 11-10-2018 VSVS12_02554 168edda66da3cb6a259b80292cbd2c4b 909 Pfam PF01043 SecA preprotein cross-linking domain 232 359 5.8E-38 T 11-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 VSVS12_04160 939e3f305d9339adb591799e1a5d6640 149 SUPERFAMILY SSF46785 1 55 1.47E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_04160 939e3f305d9339adb591799e1a5d6640 149 SMART SM00344 1 111 2.2E-14 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VSVS12_04160 939e3f305d9339adb591799e1a5d6640 149 SUPERFAMILY SSF54909 64 145 5.77E-11 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel VSVS12_04160 939e3f305d9339adb591799e1a5d6640 149 Gene3D G3DSA:3.30.70.920 54 148 4.1E-12 T 11-10-2018 VSVS12_04160 939e3f305d9339adb591799e1a5d6640 149 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 47 1.0E-15 T 11-10-2018 VSVS12_04160 939e3f305d9339adb591799e1a5d6640 149 Pfam PF01037 Lrp/AsnC ligand binding domain 78 140 4.4E-10 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VSVS12_04160 939e3f305d9339adb591799e1a5d6640 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 1.9E-12 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VSVS12_04160 939e3f305d9339adb591799e1a5d6640 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 1.9E-12 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VSVS12_04160 939e3f305d9339adb591799e1a5d6640 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 1.9E-12 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VSVS12_04160 939e3f305d9339adb591799e1a5d6640 149 Gene3D G3DSA:1.10.10.10 1 52 3.5E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_04160 939e3f305d9339adb591799e1a5d6640 149 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 11-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VSVS12_03016 ef8803852804691336d5cf9f34e8bc31 149 Gene3D G3DSA:1.10.357.10 1 145 1.1E-29 T 11-10-2018 VSVS12_03137 833b17b10e640090973bbb0e8cac0be0 101 Pfam PF08803 Putative mono-oxygenase ydhR 4 99 1.5E-41 T 11-10-2018 IPR014910 Putative monooxygenase YdhR VSVS12_03137 833b17b10e640090973bbb0e8cac0be0 101 Gene3D G3DSA:3.30.70.100 1 101 2.5E-43 T 11-10-2018 VSVS12_03137 833b17b10e640090973bbb0e8cac0be0 101 SUPERFAMILY SSF54909 3 96 1.61E-33 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel VSVS12_02352 eec484460ff2f3c1be5868d85ae11ca9 621 Gene3D G3DSA:3.40.50.920 495 621 2.5E-43 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VSVS12_02352 eec484460ff2f3c1be5868d85ae11ca9 621 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VSVS12_02352 eec484460ff2f3c1be5868d85ae11ca9 621 Pfam PF02779 Transketolase, pyrimidine binding domain 318 478 4.2E-37 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VSVS12_02352 eec484460ff2f3c1be5868d85ae11ca9 621 SUPERFAMILY SSF52518 8 381 8.5E-76 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold VSVS12_02352 eec484460ff2f3c1be5868d85ae11ca9 621 Pfam PF02780 Transketolase, C-terminal domain 495 611 5.9E-28 T 11-10-2018 IPR033248 Transketolase, C-terminal domain VSVS12_02352 eec484460ff2f3c1be5868d85ae11ca9 621 SUPERFAMILY SSF52518 317 504 5.3E-57 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold VSVS12_02352 eec484460ff2f3c1be5868d85ae11ca9 621 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VSVS12_02352 eec484460ff2f3c1be5868d85ae11ca9 621 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 14 282 9.4E-118 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VSVS12_02352 eec484460ff2f3c1be5868d85ae11ca9 621 SMART SM00861 319 483 3.4E-62 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VSVS12_02352 eec484460ff2f3c1be5868d85ae11ca9 621 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 12 619 2.5E-301 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VSVS12_02352 eec484460ff2f3c1be5868d85ae11ca9 621 Gene3D G3DSA:3.40.50.970 316 489 1.1E-64 T 11-10-2018 VSVS12_02352 eec484460ff2f3c1be5868d85ae11ca9 621 SUPERFAMILY SSF52922 492 619 1.44E-33 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VSVS12_02352 eec484460ff2f3c1be5868d85ae11ca9 621 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 620 45.59 T 11-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VSVS12_04296 314aeb7d516aeb1836777605a9cbd62f 331 Gene3D G3DSA:2.40.160.10 22 331 8.9E-60 T 11-10-2018 IPR023614 Porin domain superfamily VSVS12_04296 314aeb7d516aeb1836777605a9cbd62f 331 Pfam PF13609 Gram-negative porin 7 204 1.9E-16 T 11-10-2018 VSVS12_04296 314aeb7d516aeb1836777605a9cbd62f 331 SUPERFAMILY SSF56935 22 331 5.49E-45 T 11-10-2018 VSVS12_01313 774932289df715494baf9b03772eeb2a 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 1.2E-41 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VSVS12_01313 774932289df715494baf9b03772eeb2a 306 Gene3D G3DSA:1.10.3720.10 84 301 2.7E-22 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_01313 774932289df715494baf9b03772eeb2a 306 SUPERFAMILY SSF161098 89 291 8.83E-21 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_00516 2cb80e8c9fa6c67d4bd06d9552bc3acb 616 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 12 616 49.478 T 11-10-2018 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VSVS12_00516 2cb80e8c9fa6c67d4bd06d9552bc3acb 616 SUPERFAMILY SSF52218 80 227 8.38E-46 T 11-10-2018 IPR029039 Flavoprotein-like superfamily VSVS12_00516 2cb80e8c9fa6c67d4bd06d9552bc3acb 616 Pfam PF00175 Oxidoreductase NAD-binding domain 474 580 6.6E-18 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VSVS12_00516 2cb80e8c9fa6c67d4bd06d9552bc3acb 616 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 511 522 1.9E-28 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VSVS12_00516 2cb80e8c9fa6c67d4bd06d9552bc3acb 616 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 565 573 1.9E-28 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VSVS12_00516 2cb80e8c9fa6c67d4bd06d9552bc3acb 616 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 287 297 1.9E-28 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VSVS12_00516 2cb80e8c9fa6c67d4bd06d9552bc3acb 616 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 403 410 1.9E-28 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VSVS12_00516 2cb80e8c9fa6c67d4bd06d9552bc3acb 616 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 473 492 1.9E-28 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VSVS12_00516 2cb80e8c9fa6c67d4bd06d9552bc3acb 616 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 436 445 1.9E-28 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VSVS12_00516 2cb80e8c9fa6c67d4bd06d9552bc3acb 616 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 542 558 1.9E-28 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VSVS12_00516 2cb80e8c9fa6c67d4bd06d9552bc3acb 616 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 498 507 1.9E-28 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VSVS12_00516 2cb80e8c9fa6c67d4bd06d9552bc3acb 616 SUPERFAMILY SSF63380 246 462 8.72E-63 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VSVS12_00516 2cb80e8c9fa6c67d4bd06d9552bc3acb 616 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 19 616 1.3E-257 T 11-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VSVS12_00516 2cb80e8c9fa6c67d4bd06d9552bc3acb 616 PIRSF PIRSF000207 12 616 1.3E-273 T 11-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 VSVS12_00516 2cb80e8c9fa6c67d4bd06d9552bc3acb 616 Pfam PF00258 Flavodoxin 83 206 3.9E-28 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VSVS12_00516 2cb80e8c9fa6c67d4bd06d9552bc3acb 616 Gene3D G3DSA:3.40.50.80 462 616 1.4E-61 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VSVS12_00516 2cb80e8c9fa6c67d4bd06d9552bc3acb 616 Gene3D G3DSA:2.40.30.10 249 456 2.4E-70 T 11-10-2018 VSVS12_00516 2cb80e8c9fa6c67d4bd06d9552bc3acb 616 PRINTS PR00369 Flavodoxin signature 130 141 6.3E-10 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VSVS12_00516 2cb80e8c9fa6c67d4bd06d9552bc3acb 616 PRINTS PR00369 Flavodoxin signature 162 172 6.3E-10 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VSVS12_00516 2cb80e8c9fa6c67d4bd06d9552bc3acb 616 PRINTS PR00369 Flavodoxin signature 82 95 6.3E-10 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VSVS12_00516 2cb80e8c9fa6c67d4bd06d9552bc3acb 616 PRINTS PR00369 Flavodoxin signature 186 205 6.3E-10 T 11-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 VSVS12_00516 2cb80e8c9fa6c67d4bd06d9552bc3acb 616 Gene3D G3DSA:3.40.50.360 71 235 5.8E-46 T 11-10-2018 IPR029039 Flavoprotein-like superfamily VSVS12_00516 2cb80e8c9fa6c67d4bd06d9552bc3acb 616 SUPERFAMILY SSF52343 461 616 4.85E-53 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VSVS12_00516 2cb80e8c9fa6c67d4bd06d9552bc3acb 616 Pfam PF00667 FAD binding domain 249 440 1.3E-27 T 11-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 VSVS12_00516 2cb80e8c9fa6c67d4bd06d9552bc3acb 616 Gene3D G3DSA:1.20.990.10 297 401 2.4E-70 T 11-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 VSVS12_03685 c00b2888cada8abccd12e8dec73de453 492 PRINTS PR01050 Pyruvate kinase family signature 273 297 1.0E-53 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VSVS12_03685 c00b2888cada8abccd12e8dec73de453 492 PRINTS PR01050 Pyruvate kinase family signature 59 75 1.0E-53 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VSVS12_03685 c00b2888cada8abccd12e8dec73de453 492 PRINTS PR01050 Pyruvate kinase family signature 188 202 1.0E-53 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VSVS12_03685 c00b2888cada8abccd12e8dec73de453 492 PRINTS PR01050 Pyruvate kinase family signature 221 247 1.0E-53 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VSVS12_03685 c00b2888cada8abccd12e8dec73de453 492 PRINTS PR01050 Pyruvate kinase family signature 248 272 1.0E-53 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VSVS12_03685 c00b2888cada8abccd12e8dec73de453 492 PRINTS PR01050 Pyruvate kinase family signature 298 316 1.0E-53 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VSVS12_03685 c00b2888cada8abccd12e8dec73de453 492 PRINTS PR01050 Pyruvate kinase family signature 317 333 1.0E-53 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VSVS12_03685 c00b2888cada8abccd12e8dec73de453 492 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 3 477 1.5E-144 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VSVS12_03685 c00b2888cada8abccd12e8dec73de453 492 SUPERFAMILY SSF52935 327 478 1.19E-18 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VSVS12_03685 c00b2888cada8abccd12e8dec73de453 492 Gene3D G3DSA:2.40.33.10 70 170 1.5E-139 T 11-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VSVS12_03685 c00b2888cada8abccd12e8dec73de453 492 SUPERFAMILY SSF51621 3 343 1.12E-86 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VSVS12_03685 c00b2888cada8abccd12e8dec73de453 492 SUPERFAMILY SSF50800 71 168 3.14E-22 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily VSVS12_03685 c00b2888cada8abccd12e8dec73de453 492 Pfam PF00224 Pyruvate kinase, barrel domain 3 345 6.1E-123 T 11-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VSVS12_03685 c00b2888cada8abccd12e8dec73de453 492 Pfam PF02887 Pyruvate kinase, alpha/beta domain 381 475 1.5E-8 T 11-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VSVS12_03685 c00b2888cada8abccd12e8dec73de453 492 Gene3D G3DSA:3.40.1380.20 340 473 1.5E-139 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VSVS12_03685 c00b2888cada8abccd12e8dec73de453 492 Gene3D G3DSA:3.20.20.60 3 339 1.5E-139 T 11-10-2018 VSVS12_04164 cb10b999e51478c0016f1ae14e0f54d6 407 SUPERFAMILY SSF111369 187 296 1.7E-7 T 11-10-2018 VSVS12_04164 cb10b999e51478c0016f1ae14e0f54d6 407 Gene3D G3DSA:1.10.287.470 133 219 6.5E-5 T 11-10-2018 VSVS12_04164 cb10b999e51478c0016f1ae14e0f54d6 407 SUPERFAMILY SSF111369 71 155 2.48E-8 T 11-10-2018 VSVS12_04164 cb10b999e51478c0016f1ae14e0f54d6 407 Gene3D G3DSA:2.40.30.170 276 378 8.6E-9 T 11-10-2018 VSVS12_04164 cb10b999e51478c0016f1ae14e0f54d6 407 Gene3D G3DSA:1.10.287.470 100 132 4.8E-10 T 11-10-2018 VSVS12_04164 cb10b999e51478c0016f1ae14e0f54d6 407 Pfam PF13533 Biotin-lipoyl like 70 110 6.8E-10 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VSVS12_04164 cb10b999e51478c0016f1ae14e0f54d6 407 Gene3D G3DSA:2.40.50.100 71 99 4.8E-10 T 11-10-2018 VSVS12_02898 0c9133274175a9ba8be311366224569e 266 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 173 259 1.5E-26 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VSVS12_02898 0c9133274175a9ba8be311366224569e 266 SUPERFAMILY SSF54534 48 261 5.7E-60 T 11-10-2018 VSVS12_02898 0c9133274175a9ba8be311366224569e 266 Gene3D G3DSA:3.10.50.40 155 262 9.5E-42 T 11-10-2018 VSVS12_02898 0c9133274175a9ba8be311366224569e 266 Gene3D G3DSA:1.10.287.460 33 154 3.5E-29 T 11-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 VSVS12_02898 0c9133274175a9ba8be311366224569e 266 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 38 165 5.3E-28 T 11-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 VSVS12_04234 6c757603b9234b6db58eee0aac6bdf3b 275 Pfam PF02311 AraC-like ligand binding domain 19 150 2.0E-26 T 11-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VSVS12_04234 6c757603b9234b6db58eee0aac6bdf3b 275 SUPERFAMILY SSF51215 29 156 5.36E-18 T 11-10-2018 IPR037923 Transcription regulator HTH-like VSVS12_04234 6c757603b9234b6db58eee0aac6bdf3b 275 SUPERFAMILY SSF46689 227 273 4.93E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_04234 6c757603b9234b6db58eee0aac6bdf3b 275 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 227 268 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VSVS12_04234 6c757603b9234b6db58eee0aac6bdf3b 275 SUPERFAMILY SSF46689 174 224 5.02E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_04234 6c757603b9234b6db58eee0aac6bdf3b 275 SMART SM00342 190 272 9.7E-29 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VSVS12_04234 6c757603b9234b6db58eee0aac6bdf3b 275 Gene3D G3DSA:1.10.10.60 171 226 1.1E-12 T 11-10-2018 VSVS12_04234 6c757603b9234b6db58eee0aac6bdf3b 275 Pfam PF12833 Helix-turn-helix domain 196 273 4.1E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VSVS12_04234 6c757603b9234b6db58eee0aac6bdf3b 275 Gene3D G3DSA:1.10.10.60 227 275 1.5E-13 T 11-10-2018 VSVS12_03638 5455c0e47ad9fcbbeee5137ae1c3ba07 504 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 5 497 2.1E-223 T 11-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 VSVS12_03638 5455c0e47ad9fcbbeee5137ae1c3ba07 504 SUPERFAMILY SSF53067 5 256 1.81E-93 T 11-10-2018 VSVS12_03638 5455c0e47ad9fcbbeee5137ae1c3ba07 504 PIRSF PIRSF000538 4 503 2.9E-174 T 11-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VSVS12_03638 5455c0e47ad9fcbbeee5137ae1c3ba07 504 Gene3D G3DSA:3.30.420.40 2 254 3.8E-112 T 11-10-2018 VSVS12_03638 5455c0e47ad9fcbbeee5137ae1c3ba07 504 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 253 7.2E-86 T 11-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 VSVS12_03638 5455c0e47ad9fcbbeee5137ae1c3ba07 504 Hamap MF_00186 Glycerol kinase [glpK]. 4 498 57.85 T 11-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 VSVS12_03638 5455c0e47ad9fcbbeee5137ae1c3ba07 504 Gene3D G3DSA:3.30.420.40 255 500 3.4E-92 T 11-10-2018 VSVS12_03638 5455c0e47ad9fcbbeee5137ae1c3ba07 504 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 451 4.9E-60 T 11-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 VSVS12_03638 5455c0e47ad9fcbbeee5137ae1c3ba07 504 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 136 148 - T 11-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VSVS12_03638 5455c0e47ad9fcbbeee5137ae1c3ba07 504 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 363 383 - T 11-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VSVS12_03638 5455c0e47ad9fcbbeee5137ae1c3ba07 504 SUPERFAMILY SSF53067 255 497 4.53E-85 T 11-10-2018 VSVS12_00758 2aed21789979cf1619bfbcec2b3b7e34 86 SUPERFAMILY SSF46992 3 86 2.62E-32 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00758 2aed21789979cf1619bfbcec2b3b7e34 86 Gene3D G3DSA:1.20.58.110 1 86 1.0E-29 T 11-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00758 2aed21789979cf1619bfbcec2b3b7e34 86 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 86 9.0E-29 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00758 2aed21789979cf1619bfbcec2b3b7e34 86 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 85 3.5E-31 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00758 2aed21789979cf1619bfbcec2b3b7e34 86 Pfam PF01649 Ribosomal protein S20 2 84 1.8E-27 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00758 2aed21789979cf1619bfbcec2b3b7e34 86 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.536 T 11-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_02400 6c38f791fa33c5006ef55b42fc2090b1 1303 SUPERFAMILY SSF55326 619 817 6.54E-70 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VSVS12_02400 6c38f791fa33c5006ef55b42fc2090b1 1303 SUPERFAMILY SSF52317 1044 1302 2.02E-99 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like VSVS12_02400 6c38f791fa33c5006ef55b42fc2090b1 1303 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 1 1303 21.413 T 11-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VSVS12_02400 6c38f791fa33c5006ef55b42fc2090b1 1303 SUPERFAMILY SSF109736 155 221 1.96E-20 T 11-10-2018 VSVS12_02400 6c38f791fa33c5006ef55b42fc2090b1 1303 SUPERFAMILY SSF56042 433 616 1.2E-52 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VSVS12_02400 6c38f791fa33c5006ef55b42fc2090b1 1303 Gene3D G3DSA:3.90.650.10 823 988 5.3E-30 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VSVS12_02400 6c38f791fa33c5006ef55b42fc2090b1 1303 Gene3D G3DSA:3.90.650.10 423 607 4.7E-54 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VSVS12_02400 6c38f791fa33c5006ef55b42fc2090b1 1303 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 3 1301 0.0 T 11-10-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VSVS12_02400 6c38f791fa33c5006ef55b42fc2090b1 1303 Pfam PF02769 AIR synthase related protein, C-terminal domain 433 590 1.3E-26 T 11-10-2018 IPR010918 PurM-like, C-terminal domain VSVS12_02400 6c38f791fa33c5006ef55b42fc2090b1 1303 Pfam PF02769 AIR synthase related protein, C-terminal domain 840 973 8.4E-14 T 11-10-2018 IPR010918 PurM-like, C-terminal domain VSVS12_02400 6c38f791fa33c5006ef55b42fc2090b1 1303 Gene3D G3DSA:3.30.1330.10 215 422 6.2E-41 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VSVS12_02400 6c38f791fa33c5006ef55b42fc2090b1 1303 SMART SM01211 1047 1302 2.0E-157 T 11-10-2018 VSVS12_02400 6c38f791fa33c5006ef55b42fc2090b1 1303 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1047 1300 4.6E-107 T 11-10-2018 VSVS12_02400 6c38f791fa33c5006ef55b42fc2090b1 1303 Gene3D G3DSA:3.40.50.880 989 1303 7.6E-141 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like VSVS12_02400 6c38f791fa33c5006ef55b42fc2090b1 1303 SUPERFAMILY SSF56042 833 1041 3.89E-54 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VSVS12_02400 6c38f791fa33c5006ef55b42fc2090b1 1303 Gene3D G3DSA:3.30.1330.10 614 812 1.8E-25 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VSVS12_02400 6c38f791fa33c5006ef55b42fc2090b1 1303 Gene3D G3DSA:1.10.8.750 153 214 6.9E-27 T 11-10-2018 VSVS12_02400 6c38f791fa33c5006ef55b42fc2090b1 1303 SUPERFAMILY SSF82697 1 150 4.76E-50 T 11-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VSVS12_02400 6c38f791fa33c5006ef55b42fc2090b1 1303 SUPERFAMILY SSF55326 222 429 2.44E-64 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VSVS12_03792 668ff124aafe66402f4803e54f4b7446 258 SUPERFAMILY SSF52821 2 129 1.57E-29 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily VSVS12_03792 668ff124aafe66402f4803e54f4b7446 258 Gene3D G3DSA:3.40.250.10 1 124 2.2E-36 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily VSVS12_03792 668ff124aafe66402f4803e54f4b7446 258 SMART SM00450 14 110 1.5E-8 T 11-10-2018 IPR001763 Rhodanese-like domain VSVS12_03792 668ff124aafe66402f4803e54f4b7446 258 SMART SM00450 133 255 1.4E-11 T 11-10-2018 IPR001763 Rhodanese-like domain VSVS12_03792 668ff124aafe66402f4803e54f4b7446 258 Gene3D G3DSA:3.40.250.10 136 258 4.0E-34 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily VSVS12_03792 668ff124aafe66402f4803e54f4b7446 258 SUPERFAMILY SSF52821 136 258 1.7E-26 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily VSVS12_03792 668ff124aafe66402f4803e54f4b7446 258 Pfam PF00581 Rhodanese-like domain 24 106 8.7E-12 T 11-10-2018 IPR001763 Rhodanese-like domain VSVS12_03792 668ff124aafe66402f4803e54f4b7446 258 Pfam PF00581 Rhodanese-like domain 135 251 3.3E-8 T 11-10-2018 IPR001763 Rhodanese-like domain VSVS12_02316 b695c68404c4519827fcfa201eaa1aa2 300 Pfam PF04261 Dyp-type peroxidase family 5 293 1.7E-87 T 11-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 VSVS12_02316 b695c68404c4519827fcfa201eaa1aa2 300 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 293 2.7E-83 T 11-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 VSVS12_02316 b695c68404c4519827fcfa201eaa1aa2 300 SUPERFAMILY SSF54909 1 297 8.76E-90 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel VSVS12_01193 49b8da433bb499fb1594eb78de1d7718 619 Gene3D G3DSA:1.10.4030.30 40 173 2.4E-13 T 11-10-2018 VSVS12_01193 49b8da433bb499fb1594eb78de1d7718 619 SUPERFAMILY SSF109998 39 246 7.3E-36 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily VSVS12_01193 49b8da433bb499fb1594eb78de1d7718 619 Gene3D G3DSA:1.10.4030.30 241 365 3.2E-32 T 11-10-2018 VSVS12_01193 49b8da433bb499fb1594eb78de1d7718 619 SUPERFAMILY SSF54534 225 360 5.1E-29 T 11-10-2018 VSVS12_01193 49b8da433bb499fb1594eb78de1d7718 619 Pfam PF13616 PPIC-type PPIASE domain 262 360 6.6E-24 T 11-10-2018 VSVS12_01193 49b8da433bb499fb1594eb78de1d7718 619 Pfam PF13624 SurA N-terminal domain 1 165 3.3E-48 T 11-10-2018 VSVS12_01193 49b8da433bb499fb1594eb78de1d7718 619 Gene3D G3DSA:3.10.50.40 269 363 3.2E-32 T 11-10-2018 VSVS12_01193 49b8da433bb499fb1594eb78de1d7718 619 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 299 320 - T 11-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 VSVS12_01547 567fe8d127750783b82980ac8ade9e79 88 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 85 1.5E-46 T 11-10-2018 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 VSVS12_01547 567fe8d127750783b82980ac8ade9e79 88 SUPERFAMILY SSF52833 3 81 1.48E-19 T 11-10-2018 IPR036249 Thioredoxin-like superfamily VSVS12_01547 567fe8d127750783b82980ac8ade9e79 88 Pfam PF00462 Glutaredoxin 3 69 8.3E-16 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VSVS12_01547 567fe8d127750783b82980ac8ade9e79 88 PRINTS PR00160 Glutaredoxin signature 66 79 2.6E-10 T 11-10-2018 IPR014025 Glutaredoxin subgroup VSVS12_01547 567fe8d127750783b82980ac8ade9e79 88 PRINTS PR00160 Glutaredoxin signature 3 21 2.6E-10 T 11-10-2018 IPR014025 Glutaredoxin subgroup VSVS12_01547 567fe8d127750783b82980ac8ade9e79 88 PRINTS PR00160 Glutaredoxin signature 52 65 2.6E-10 T 11-10-2018 IPR014025 Glutaredoxin subgroup VSVS12_01547 567fe8d127750783b82980ac8ade9e79 88 Gene3D G3DSA:3.40.30.10 1 84 8.2E-24 T 11-10-2018 VSVS12_02860 950d0c952b2747e352c04af854a519a7 208 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 7 204 34.934 T 11-10-2018 IPR004507 Flavin prenyltransferase UbiX-like VSVS12_02860 950d0c952b2747e352c04af854a519a7 208 SUPERFAMILY SSF52507 7 203 2.62E-56 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 VSVS12_02860 950d0c952b2747e352c04af854a519a7 208 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 9 202 2.6E-56 T 11-10-2018 IPR004507 Flavin prenyltransferase UbiX-like VSVS12_02860 950d0c952b2747e352c04af854a519a7 208 Pfam PF02441 Flavoprotein 8 183 2.2E-25 T 11-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 VSVS12_02860 950d0c952b2747e352c04af854a519a7 208 Gene3D G3DSA:3.40.50.1950 1 205 2.8E-77 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 VSVS12_01186 163fcfc6732534cdc8135dc93cee6383 445 Pfam PF00072 Response regulator receiver domain 4 113 4.7E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_01186 163fcfc6732534cdc8135dc93cee6383 445 Gene3D G3DSA:1.10.10.60 385 442 8.9E-13 T 11-10-2018 VSVS12_01186 163fcfc6732534cdc8135dc93cee6383 445 SUPERFAMILY SSF52172 3 188 1.57E-37 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_01186 163fcfc6732534cdc8135dc93cee6383 445 SMART SM00382 164 307 5.0E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_01186 163fcfc6732534cdc8135dc93cee6383 445 Pfam PF02954 Bacterial regulatory protein, Fis family 397 437 1.3E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VSVS12_01186 163fcfc6732534cdc8135dc93cee6383 445 Gene3D G3DSA:3.40.50.2300 2 129 9.8E-31 T 11-10-2018 VSVS12_01186 163fcfc6732534cdc8135dc93cee6383 445 Pfam PF00158 Sigma-54 interaction domain 144 310 1.5E-67 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VSVS12_01186 163fcfc6732534cdc8135dc93cee6383 445 SUPERFAMILY SSF52540 144 374 3.72E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01186 163fcfc6732534cdc8135dc93cee6383 445 Gene3D G3DSA:1.10.8.60 315 380 2.0E-19 T 11-10-2018 VSVS12_01186 163fcfc6732534cdc8135dc93cee6383 445 SMART SM00448 2 114 1.5E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_01186 163fcfc6732534cdc8135dc93cee6383 445 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 168 181 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VSVS12_01186 163fcfc6732534cdc8135dc93cee6383 445 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 357 366 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VSVS12_01186 163fcfc6732534cdc8135dc93cee6383 445 SUPERFAMILY SSF46689 355 440 2.87E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_01186 163fcfc6732534cdc8135dc93cee6383 445 Gene3D G3DSA:3.40.50.300 130 314 9.6E-61 T 11-10-2018 VSVS12_01186 163fcfc6732534cdc8135dc93cee6383 445 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 230 245 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VSVS12_01020 b753c0da7e8031db6686a3b92966f991 114 SUPERFAMILY SSF52833 2 114 7.73E-32 T 11-10-2018 IPR036249 Thioredoxin-like superfamily VSVS12_01020 b753c0da7e8031db6686a3b92966f991 114 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 3 114 4.7E-42 T 11-10-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 VSVS12_01020 b753c0da7e8031db6686a3b92966f991 114 Gene3D G3DSA:3.40.30.10 1 114 2.4E-45 T 11-10-2018 VSVS12_01020 b753c0da7e8031db6686a3b92966f991 114 Pfam PF03960 ArsC family 6 112 1.6E-17 T 11-10-2018 IPR006660 Arsenate reductase-like VSVS12_01874 f3066979c08617026078205164011f23 451 SMART SM00387 353 447 1.0E-7 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_01874 f3066979c08617026078205164011f23 451 Gene3D G3DSA:3.30.565.10 313 448 3.6E-32 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_01874 f3066979c08617026078205164011f23 451 Gene3D G3DSA:3.30.450.20 28 203 1.8E-48 T 11-10-2018 VSVS12_01874 f3066979c08617026078205164011f23 451 SUPERFAMILY SSF55874 322 443 3.14E-20 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_01874 f3066979c08617026078205164011f23 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 356 446 4.7E-8 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_01874 f3066979c08617026078205164011f23 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 403 1.8E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_01874 f3066979c08617026078205164011f23 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 407 425 1.8E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_01874 f3066979c08617026078205164011f23 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 444 1.8E-5 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_01874 f3066979c08617026078205164011f23 451 Pfam PF17200 Single Cache domain 2 45 190 7.9E-43 T 11-10-2018 IPR033480 Single Cache domain 2 VSVS12_01874 f3066979c08617026078205164011f23 451 SMART SM01049 42 133 4.9E-31 T 11-10-2018 IPR033480 Single Cache domain 2 VSVS12_01874 f3066979c08617026078205164011f23 451 PIRSF PIRSF037314 1 451 2.5E-180 T 11-10-2018 IPR017171 Signal transduction histidine kinase, MctS VSVS12_01874 f3066979c08617026078205164011f23 451 Pfam PF07730 Histidine kinase 250 315 5.0E-14 T 11-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 VSVS12_03433 51d103bb84ad8dd31cf9961461434623 244 Pfam PF01925 Sulfite exporter TauE/SafE 14 234 3.8E-23 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VSVS12_04284 4399a3013b0c9c862fb6f43284b5e7fd 955 Pfam PF02347 Glycine cleavage system P-protein 460 736 2.6E-7 T 11-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 VSVS12_04284 4399a3013b0c9c862fb6f43284b5e7fd 955 Pfam PF02347 Glycine cleavage system P-protein 17 440 2.9E-181 T 11-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 VSVS12_04284 4399a3013b0c9c862fb6f43284b5e7fd 955 Gene3D G3DSA:3.90.1150.10 763 898 4.0E-40 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VSVS12_04284 4399a3013b0c9c862fb6f43284b5e7fd 955 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 954 25.413 T 11-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 VSVS12_04284 4399a3013b0c9c862fb6f43284b5e7fd 955 SUPERFAMILY SSF53383 443 949 7.35E-96 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VSVS12_04284 4399a3013b0c9c862fb6f43284b5e7fd 955 Gene3D G3DSA:3.40.640.10 95 353 7.0E-105 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VSVS12_04284 4399a3013b0c9c862fb6f43284b5e7fd 955 Gene3D G3DSA:3.40.640.10 524 749 2.4E-57 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VSVS12_04284 4399a3013b0c9c862fb6f43284b5e7fd 955 SUPERFAMILY SSF53383 17 440 2.02E-100 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VSVS12_04284 4399a3013b0c9c862fb6f43284b5e7fd 955 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 948 0.0 T 11-10-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 VSVS12_03357 1a53527e46566189a0ace3b08013d923 300 Pfam PF03466 LysR substrate binding domain 93 299 8.7E-37 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_03357 1a53527e46566189a0ace3b08013d923 300 SUPERFAMILY SSF53850 93 299 5.79E-41 T 11-10-2018 VSVS12_03357 1a53527e46566189a0ace3b08013d923 300 Gene3D G3DSA:3.40.190.10 97 297 7.3E-57 T 11-10-2018 VSVS12_03357 1a53527e46566189a0ace3b08013d923 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 68 7.4E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_03357 1a53527e46566189a0ace3b08013d923 300 Gene3D G3DSA:1.10.10.10 8 94 3.6E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_03357 1a53527e46566189a0ace3b08013d923 300 Gene3D G3DSA:3.40.190.10 169 271 7.3E-57 T 11-10-2018 VSVS12_03357 1a53527e46566189a0ace3b08013d923 300 SUPERFAMILY SSF46785 10 93 5.23E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_04338 5b375c23055b981c5f8c7145fde0577f 82 Gene3D G3DSA:1.20.5.190 26 81 9.6E-13 T 11-10-2018 VSVS12_04338 5b375c23055b981c5f8c7145fde0577f 82 Pfam PF04728 Lipoprotein leucine-zipper 30 82 9.2E-24 T 11-10-2018 IPR006817 Lipoprotein leucine-zipper GO:0019867 VSVS12_04338 5b375c23055b981c5f8c7145fde0577f 82 PIRSF PIRSF002855 1 82 6.5E-32 T 11-10-2018 IPR016367 Murein-lipoprotein VSVS12_04338 5b375c23055b981c5f8c7145fde0577f 82 SUPERFAMILY SSF58042 27 81 8.77E-16 T 11-10-2018 VSVS12_02833 81f9ba07248875e43a582daac157d3cb 610 Pfam PF13522 Glutamine amidotransferase domain 55 174 1.4E-21 T 11-10-2018 VSVS12_02833 81f9ba07248875e43a582daac157d3cb 610 Gene3D G3DSA:3.40.50.10490 249 609 7.5E-147 T 11-10-2018 VSVS12_02833 81f9ba07248875e43a582daac157d3cb 610 Gene3D G3DSA:3.60.20.10 2 241 4.5E-81 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VSVS12_02833 81f9ba07248875e43a582daac157d3cb 610 Pfam PF01380 SIS domain 290 419 6.1E-33 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VSVS12_02833 81f9ba07248875e43a582daac157d3cb 610 Pfam PF01380 SIS domain 463 592 4.4E-25 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VSVS12_02833 81f9ba07248875e43a582daac157d3cb 610 SUPERFAMILY SSF56235 2 234 2.57E-75 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VSVS12_02833 81f9ba07248875e43a582daac157d3cb 610 SUPERFAMILY SSF53697 245 610 2.97E-113 T 11-10-2018 VSVS12_02833 81f9ba07248875e43a582daac157d3cb 610 Gene3D G3DSA:3.40.50.10490 448 595 7.5E-147 T 11-10-2018 VSVS12_02833 81f9ba07248875e43a582daac157d3cb 610 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 610 3.0E-259 T 11-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 VSVS12_02833 81f9ba07248875e43a582daac157d3cb 610 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 610 40.443 T 11-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 VSVS12_04129 97528162d316c7ff9624048562c0075f 300 Gene3D G3DSA:1.10.3720.10 69 299 1.5E-32 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_04129 97528162d316c7ff9624048562c0075f 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 296 6.7E-23 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VSVS12_04129 97528162d316c7ff9624048562c0075f 300 SUPERFAMILY SSF161098 25 295 1.78E-35 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_04129 97528162d316c7ff9624048562c0075f 300 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 23 297 1.7E-91 T 11-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 VSVS12_00277 5fdd0f46d8d1b9281776685cf57c5e6a 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 3.7E-30 T 11-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 VSVS12_00277 5fdd0f46d8d1b9281776685cf57c5e6a 469 Gene3D G3DSA:3.30.590.10 105 457 7.3E-149 T 11-10-2018 VSVS12_00277 5fdd0f46d8d1b9281776685cf57c5e6a 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 11-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 VSVS12_00277 5fdd0f46d8d1b9281776685cf57c5e6a 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 11-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 VSVS12_00277 5fdd0f46d8d1b9281776685cf57c5e6a 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 1.9E-139 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VSVS12_00277 5fdd0f46d8d1b9281776685cf57c5e6a 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 5.5E-210 T 11-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VSVS12_00277 5fdd0f46d8d1b9281776685cf57c5e6a 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 11-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VSVS12_00277 5fdd0f46d8d1b9281776685cf57c5e6a 469 SMART SM01230 102 379 6.8E-152 T 11-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VSVS12_00277 5fdd0f46d8d1b9281776685cf57c5e6a 469 SUPERFAMILY SSF54368 3 100 3.01E-35 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VSVS12_00277 5fdd0f46d8d1b9281776685cf57c5e6a 469 Gene3D G3DSA:3.10.20.70 2 104 6.2E-40 T 11-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 VSVS12_00277 5fdd0f46d8d1b9281776685cf57c5e6a 469 SUPERFAMILY SSF55931 102 468 5.79E-138 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 VSVS12_03532 0fbf5dc7ba3e2d4eb6e60fd73f781b9a 218 Gene3D G3DSA:3.30.530.20 29 215 7.3E-49 T 11-10-2018 IPR023393 START-like domain superfamily VSVS12_03532 0fbf5dc7ba3e2d4eb6e60fd73f781b9a 218 SUPERFAMILY SSF55961 26 206 3.62E-36 T 11-10-2018 VSVS12_03532 0fbf5dc7ba3e2d4eb6e60fd73f781b9a 218 PIRSF PIRSF039033 5 218 2.3E-54 T 11-10-2018 IPR028347 START domain-containing protein VSVS12_01850 944f1b724d3fa0376fc28676b53d0c9c 580 SUPERFAMILY SSF52540 48 362 2.17E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01850 944f1b724d3fa0376fc28676b53d0c9c 580 SMART SM00487 1 178 6.2E-13 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VSVS12_01850 944f1b724d3fa0376fc28676b53d0c9c 580 SUPERFAMILY SSF57829 425 465 2.01E-6 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 VSVS12_01850 944f1b724d3fa0376fc28676b53d0c9c 580 Pfam PF00271 Helicase conserved C-terminal domain 239 342 1.0E-14 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_01850 944f1b724d3fa0376fc28676b53d0c9c 580 Pfam PF04851 Type III restriction enzyme, res subunit 2 154 6.0E-23 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VSVS12_01850 944f1b724d3fa0376fc28676b53d0c9c 580 Gene3D G3DSA:3.40.50.300 210 368 1.2E-32 T 11-10-2018 VSVS12_01850 944f1b724d3fa0376fc28676b53d0c9c 580 SMART SM00490 262 344 1.1E-11 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_01850 944f1b724d3fa0376fc28676b53d0c9c 580 Gene3D G3DSA:3.40.50.300 1 164 4.9E-29 T 11-10-2018 VSVS12_04260 418f989fd85c059ac1bc322282a2e5f7 386 SUPERFAMILY SSF46458 1 144 1.28E-39 T 11-10-2018 IPR009050 Globin-like superfamily VSVS12_04260 418f989fd85c059ac1bc322282a2e5f7 386 Pfam PF00970 Oxidoreductase FAD-binding domain 159 259 3.9E-9 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 VSVS12_04260 418f989fd85c059ac1bc322282a2e5f7 386 PRINTS PR00409 Phthalate dioxygenase reductase family signature 206 220 1.6E-8 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 VSVS12_04260 418f989fd85c059ac1bc322282a2e5f7 386 PRINTS PR00409 Phthalate dioxygenase reductase family signature 245 259 1.6E-8 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 VSVS12_04260 418f989fd85c059ac1bc322282a2e5f7 386 PRINTS PR00409 Phthalate dioxygenase reductase family signature 267 286 1.6E-8 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 VSVS12_04260 418f989fd85c059ac1bc322282a2e5f7 386 PRINTS PR00409 Phthalate dioxygenase reductase family signature 348 356 1.6E-8 T 11-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 VSVS12_04260 418f989fd85c059ac1bc322282a2e5f7 386 Pfam PF00175 Oxidoreductase NAD-binding domain 268 361 9.5E-9 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VSVS12_04260 418f989fd85c059ac1bc322282a2e5f7 386 SUPERFAMILY SSF63380 151 259 5.67E-24 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VSVS12_04260 418f989fd85c059ac1bc322282a2e5f7 386 Gene3D G3DSA:3.40.50.80 259 384 1.7E-29 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VSVS12_04260 418f989fd85c059ac1bc322282a2e5f7 386 Gene3D G3DSA:1.10.490.10 1 144 2.8E-53 T 11-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 VSVS12_04260 418f989fd85c059ac1bc322282a2e5f7 386 SUPERFAMILY SSF52343 258 383 2.36E-27 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VSVS12_04260 418f989fd85c059ac1bc322282a2e5f7 386 Pfam PF00042 Globin 8 102 2.3E-12 T 11-10-2018 IPR000971 Globin GO:0020037 VSVS12_04260 418f989fd85c059ac1bc322282a2e5f7 386 Gene3D G3DSA:2.40.30.10 152 258 1.3E-31 T 11-10-2018 VSVS12_02217 98c68c5825eefc5bbfebc0c4aaeebf8a 83 Pfam PF04226 Transglycosylase associated protein 33 82 3.1E-14 T 11-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 VSVS12_03946 14a3be55e697ae7f419af6dfe8414b1b 147 Pfam PF14352 Domain of unknown function (DUF4402) 59 146 5.1E-6 T 11-10-2018 IPR025514 Protein of unknown function DUF4402 VSVS12_01116 b507c6f7cd1f080f9d150717e23e7e4c 283 Pfam PF00520 Ion transport protein 24 236 6.6E-30 T 11-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 VSVS12_01116 b507c6f7cd1f080f9d150717e23e7e4c 283 PRINTS PR00169 Potassium channel signature 120 146 1.2E-36 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VSVS12_01116 b507c6f7cd1f080f9d150717e23e7e4c 283 PRINTS PR00169 Potassium channel signature 84 104 1.2E-36 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VSVS12_01116 b507c6f7cd1f080f9d150717e23e7e4c 283 PRINTS PR00169 Potassium channel signature 16 44 1.2E-36 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VSVS12_01116 b507c6f7cd1f080f9d150717e23e7e4c 283 PRINTS PR00169 Potassium channel signature 178 200 1.2E-36 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VSVS12_01116 b507c6f7cd1f080f9d150717e23e7e4c 283 PRINTS PR00169 Potassium channel signature 58 81 1.2E-36 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VSVS12_01116 b507c6f7cd1f080f9d150717e23e7e4c 283 PRINTS PR00169 Potassium channel signature 149 172 1.2E-36 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VSVS12_01116 b507c6f7cd1f080f9d150717e23e7e4c 283 PRINTS PR00169 Potassium channel signature 207 233 1.2E-36 T 11-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 VSVS12_01116 b507c6f7cd1f080f9d150717e23e7e4c 283 Gene3D G3DSA:1.20.120.350 2 132 1.9E-27 T 11-10-2018 IPR027359 Voltage-dependent channel domain superfamily VSVS12_01116 b507c6f7cd1f080f9d150717e23e7e4c 283 SUPERFAMILY SSF81324 23 236 6.21E-51 T 11-10-2018 VSVS12_01116 b507c6f7cd1f080f9d150717e23e7e4c 283 Gene3D G3DSA:1.10.287.70 134 243 6.0E-27 T 11-10-2018 VSVS12_00935 315c34f0bb2bb9e779f0d6a3c8890a19 669 Gene3D G3DSA:3.30.470.90 70 318 3.7E-98 T 11-10-2018 VSVS12_00935 315c34f0bb2bb9e779f0d6a3c8890a19 669 Pfam PF12826 Helix-hairpin-helix motif 511 574 3.2E-22 T 11-10-2018 VSVS12_00935 315c34f0bb2bb9e779f0d6a3c8890a19 669 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 323 399 2.1E-34 T 11-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 VSVS12_00935 315c34f0bb2bb9e779f0d6a3c8890a19 669 Gene3D G3DSA:2.20.70.80 392 432 2.4E-20 T 11-10-2018 VSVS12_00935 315c34f0bb2bb9e779f0d6a3c8890a19 669 SUPERFAMILY SSF47781 404 584 1.07E-57 T 11-10-2018 IPR010994 RuvA domain 2-like VSVS12_00935 315c34f0bb2bb9e779f0d6a3c8890a19 669 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 408 435 1.0E-10 T 11-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 VSVS12_00935 315c34f0bb2bb9e779f0d6a3c8890a19 669 Gene3D G3DSA:1.10.287.610 3 69 1.2E-28 T 11-10-2018 VSVS12_00935 315c34f0bb2bb9e779f0d6a3c8890a19 669 Gene3D G3DSA:1.10.150.20 433 506 3.5E-28 T 11-10-2018 VSVS12_00935 315c34f0bb2bb9e779f0d6a3c8890a19 669 Gene3D G3DSA:1.10.150.20 507 587 1.6E-28 T 11-10-2018 VSVS12_00935 315c34f0bb2bb9e779f0d6a3c8890a19 669 Hamap MF_01588 DNA ligase [ligA]. 3 669 53.118 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 VSVS12_00935 315c34f0bb2bb9e779f0d6a3c8890a19 669 PIRSF PIRSF001604 1 669 1.7E-251 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 VSVS12_00935 315c34f0bb2bb9e779f0d6a3c8890a19 669 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 332 347 - T 11-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site VSVS12_00935 315c34f0bb2bb9e779f0d6a3c8890a19 669 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 595 667 7.2E-12 T 11-10-2018 IPR001357 BRCT domain VSVS12_00935 315c34f0bb2bb9e779f0d6a3c8890a19 669 SUPERFAMILY SSF56091 3 317 1.18E-121 T 11-10-2018 VSVS12_00935 315c34f0bb2bb9e779f0d6a3c8890a19 669 SMART SM00292 595 669 3.2E-8 T 11-10-2018 IPR001357 BRCT domain VSVS12_00935 315c34f0bb2bb9e779f0d6a3c8890a19 669 SUPERFAMILY SSF50249 319 401 5.31E-28 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_00935 315c34f0bb2bb9e779f0d6a3c8890a19 669 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 4 319 5.0E-132 T 11-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 VSVS12_00935 315c34f0bb2bb9e779f0d6a3c8890a19 669 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 116 145 - T 11-10-2018 IPR018239 NAD-dependent DNA ligase, active site VSVS12_00935 315c34f0bb2bb9e779f0d6a3c8890a19 669 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 12 665 7.0E-262 T 11-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 VSVS12_00935 315c34f0bb2bb9e779f0d6a3c8890a19 669 SMART SM00278 481 500 190.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VSVS12_00935 315c34f0bb2bb9e779f0d6a3c8890a19 669 SMART SM00278 447 466 27.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VSVS12_00935 315c34f0bb2bb9e779f0d6a3c8890a19 669 SMART SM00278 545 564 870.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VSVS12_00935 315c34f0bb2bb9e779f0d6a3c8890a19 669 Pfam PF14520 Helix-hairpin-helix domain 447 501 7.0E-5 T 11-10-2018 VSVS12_00935 315c34f0bb2bb9e779f0d6a3c8890a19 669 SMART SM00532 4 449 1.2E-276 T 11-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 VSVS12_00935 315c34f0bb2bb9e779f0d6a3c8890a19 669 SUPERFAMILY SSF52113 596 668 1.8E-17 T 11-10-2018 IPR036420 BRCT domain superfamily VSVS12_00935 315c34f0bb2bb9e779f0d6a3c8890a19 669 Gene3D G3DSA:2.40.50.140 319 391 3.9E-33 T 11-10-2018 VSVS12_00935 315c34f0bb2bb9e779f0d6a3c8890a19 669 Gene3D G3DSA:3.40.50.10190 592 669 1.4E-24 T 11-10-2018 IPR036420 BRCT domain superfamily VSVS12_03183 e0a109d6afeeca9fcd15df001cce0c0b 238 SUPERFAMILY SSF75625 1 237 7.19E-76 T 11-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_03183 e0a109d6afeeca9fcd15df001cce0c0b 238 Gene3D G3DSA:1.10.10.200 17 78 2.1E-17 T 11-10-2018 IPR017856 Integrase-like, N-terminal VSVS12_03183 e0a109d6afeeca9fcd15df001cce0c0b 238 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 238 27.493 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_03183 e0a109d6afeeca9fcd15df001cce0c0b 238 Gene3D G3DSA:3.30.70.980 83 235 8.1E-44 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_03183 e0a109d6afeeca9fcd15df001cce0c0b 238 Pfam PF01709 Transcriptional regulator 5 236 7.7E-73 T 11-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_03183 e0a109d6afeeca9fcd15df001cce0c0b 238 Gene3D G3DSA:3.30.70.980 131 202 8.1E-44 T 11-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_04135 3c7a56c4dc93bf0bbf74854b4e7bc4a4 279 Gene3D G3DSA:1.10.10.60 176 226 1.5E-13 T 11-10-2018 VSVS12_04135 3c7a56c4dc93bf0bbf74854b4e7bc4a4 279 SUPERFAMILY SSF46689 229 277 5.38E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_04135 3c7a56c4dc93bf0bbf74854b4e7bc4a4 279 SMART SM00342 193 276 5.2E-30 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VSVS12_04135 3c7a56c4dc93bf0bbf74854b4e7bc4a4 279 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 260 276 5.5E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VSVS12_04135 3c7a56c4dc93bf0bbf74854b4e7bc4a4 279 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 260 5.5E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VSVS12_04135 3c7a56c4dc93bf0bbf74854b4e7bc4a4 279 Gene3D G3DSA:1.10.10.60 227 278 1.3E-16 T 11-10-2018 VSVS12_04135 3c7a56c4dc93bf0bbf74854b4e7bc4a4 279 Pfam PF12833 Helix-turn-helix domain 199 277 2.1E-19 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VSVS12_04135 3c7a56c4dc93bf0bbf74854b4e7bc4a4 279 SUPERFAMILY SSF46689 180 226 2.33E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_04135 3c7a56c4dc93bf0bbf74854b4e7bc4a4 279 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 230 272 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VSVS12_04135 3c7a56c4dc93bf0bbf74854b4e7bc4a4 279 SUPERFAMILY SSF51182 27 78 3.85E-5 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily VSVS12_03786 8052833673845d34800c34d8d292ac3e 322 ProSitePatterns PS01043 Transposases, IS30 family, signature. 266 282 - T 11-10-2018 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 VSVS12_03786 8052833673845d34800c34d8d292ac3e 322 Pfam PF13936 Helix-turn-helix domain 2 45 6.1E-13 T 11-10-2018 IPR025246 Transposase IS30-like HTH domain VSVS12_03786 8052833673845d34800c34d8d292ac3e 322 Gene3D G3DSA:3.30.420.10 171 321 9.5E-12 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VSVS12_03786 8052833673845d34800c34d8d292ac3e 322 Pfam PF00665 Integrase core domain 174 279 3.8E-11 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VSVS12_03786 8052833673845d34800c34d8d292ac3e 322 Gene3D G3DSA:1.10.10.60 4 46 3.8E-5 T 11-10-2018 VSVS12_03786 8052833673845d34800c34d8d292ac3e 322 SUPERFAMILY SSF53098 175 319 1.77E-26 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_04007 8052833673845d34800c34d8d292ac3e 322 ProSitePatterns PS01043 Transposases, IS30 family, signature. 266 282 - T 11-10-2018 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 VSVS12_04007 8052833673845d34800c34d8d292ac3e 322 Pfam PF13936 Helix-turn-helix domain 2 45 6.1E-13 T 11-10-2018 IPR025246 Transposase IS30-like HTH domain VSVS12_04007 8052833673845d34800c34d8d292ac3e 322 Gene3D G3DSA:3.30.420.10 171 321 9.5E-12 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VSVS12_04007 8052833673845d34800c34d8d292ac3e 322 Pfam PF00665 Integrase core domain 174 279 3.8E-11 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VSVS12_04007 8052833673845d34800c34d8d292ac3e 322 Gene3D G3DSA:1.10.10.60 4 46 3.8E-5 T 11-10-2018 VSVS12_04007 8052833673845d34800c34d8d292ac3e 322 SUPERFAMILY SSF53098 175 319 1.77E-26 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_01922 2f9300ad98588b19b9cbe1b709d76aaf 439 Gene3D G3DSA:3.30.70.270 265 436 2.2E-48 T 11-10-2018 VSVS12_01922 2f9300ad98588b19b9cbe1b709d76aaf 439 SUPERFAMILY SSF49785 43 216 3.15E-7 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily VSVS12_01922 2f9300ad98588b19b9cbe1b709d76aaf 439 SUPERFAMILY SSF55073 284 435 5.89E-40 T 11-10-2018 IPR029787 Nucleotide cyclase VSVS12_01922 2f9300ad98588b19b9cbe1b709d76aaf 439 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 277 434 3.1E-42 T 11-10-2018 IPR000160 GGDEF domain VSVS12_01922 2f9300ad98588b19b9cbe1b709d76aaf 439 Pfam PF00990 Diguanylate cyclase, GGDEF domain 279 431 1.6E-35 T 11-10-2018 IPR000160 GGDEF domain VSVS12_01922 2f9300ad98588b19b9cbe1b709d76aaf 439 SMART SM00267 268 435 1.7E-46 T 11-10-2018 IPR000160 GGDEF domain VSVS12_00505 8fcba63ff9d5e23e47d179cac5835273 288 Gene3D G3DSA:3.30.950.10 152 287 3.3E-45 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 VSVS12_00505 8fcba63ff9d5e23e47d179cac5835273 288 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 41 55 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VSVS12_00505 8fcba63ff9d5e23e47d179cac5835273 288 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 116 149 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VSVS12_00505 8fcba63ff9d5e23e47d179cac5835273 288 Gene3D G3DSA:3.40.1010.10 34 151 1.2E-43 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 VSVS12_00505 8fcba63ff9d5e23e47d179cac5835273 288 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 38 248 5.9E-47 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 VSVS12_00505 8fcba63ff9d5e23e47d179cac5835273 288 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 36 269 3.3E-91 T 11-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VSVS12_00505 8fcba63ff9d5e23e47d179cac5835273 288 SUPERFAMILY SSF53790 32 276 1.83E-78 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 VSVS12_00886 520b7ba459795c623366cb532c55abfa 523 SUPERFAMILY SSF53955 109 262 9.34E-40 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily VSVS12_00886 520b7ba459795c623366cb532c55abfa 523 SUPERFAMILY SSF54106 469 516 1.26E-9 T 11-10-2018 VSVS12_00886 520b7ba459795c623366cb532c55abfa 523 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 130 158 - T 11-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VSVS12_00886 520b7ba459795c623366cb532c55abfa 523 Pfam PF01476 LysM domain 341 383 6.5E-11 T 11-10-2018 IPR018392 LysM domain VSVS12_00886 520b7ba459795c623366cb532c55abfa 523 Pfam PF01476 LysM domain 472 514 1.7E-9 T 11-10-2018 IPR018392 LysM domain VSVS12_00886 520b7ba459795c623366cb532c55abfa 523 Pfam PF01476 LysM domain 415 457 4.3E-11 T 11-10-2018 IPR018392 LysM domain VSVS12_00886 520b7ba459795c623366cb532c55abfa 523 Gene3D G3DSA:3.10.350.10 469 517 3.3E-13 T 11-10-2018 IPR036779 LysM domain superfamily VSVS12_00886 520b7ba459795c623366cb532c55abfa 523 SUPERFAMILY SSF54106 413 458 3.14E-10 T 11-10-2018 VSVS12_00886 520b7ba459795c623366cb532c55abfa 523 Gene3D G3DSA:3.10.350.10 398 465 2.3E-14 T 11-10-2018 IPR036779 LysM domain superfamily VSVS12_00886 520b7ba459795c623366cb532c55abfa 523 Gene3D G3DSA:3.10.350.10 326 397 1.2E-14 T 11-10-2018 IPR036779 LysM domain superfamily VSVS12_00886 520b7ba459795c623366cb532c55abfa 523 Gene3D G3DSA:1.10.530.10 106 257 6.2E-29 T 11-10-2018 VSVS12_00886 520b7ba459795c623366cb532c55abfa 523 SUPERFAMILY SSF54106 340 383 1.96E-10 T 11-10-2018 VSVS12_00886 520b7ba459795c623366cb532c55abfa 523 SMART SM00257 471 515 9.6E-9 T 11-10-2018 IPR018392 LysM domain VSVS12_00886 520b7ba459795c623366cb532c55abfa 523 SMART SM00257 340 383 2.3E-11 T 11-10-2018 IPR018392 LysM domain VSVS12_00886 520b7ba459795c623366cb532c55abfa 523 SMART SM00257 414 458 4.0E-12 T 11-10-2018 IPR018392 LysM domain VSVS12_00886 520b7ba459795c623366cb532c55abfa 523 Pfam PF01464 Transglycosylase SLT domain 124 223 8.2E-21 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 VSVS12_01754 a9ed7c0ad214cd304605eeb2681e4b08 271 Gene3D G3DSA:3.90.226.10 1 271 4.5E-52 T 11-10-2018 VSVS12_01754 a9ed7c0ad214cd304605eeb2681e4b08 271 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 214 2.7E-29 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 VSVS12_01754 a9ed7c0ad214cd304605eeb2681e4b08 271 SUPERFAMILY SSF52096 2 246 9.74E-45 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VSVS12_01754 a9ed7c0ad214cd304605eeb2681e4b08 271 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 97 117 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 VSVS12_00476 892f85d2ca4450a5c8e6c9995b3b1a18 110 Gene3D G3DSA:3.90.470.10 1 110 3.9E-49 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 VSVS12_00476 892f85d2ca4450a5c8e6c9995b3b1a18 110 SUPERFAMILY SSF54843 1 109 3.92E-45 T 11-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 VSVS12_00476 892f85d2ca4450a5c8e6c9995b3b1a18 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 11-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00476 892f85d2ca4450a5c8e6c9995b3b1a18 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 29.764 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00476 892f85d2ca4450a5c8e6c9995b3b1a18 110 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 4.0E-40 T 11-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 VSVS12_00476 892f85d2ca4450a5c8e6c9995b3b1a18 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 1.4E-50 T 11-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_01892 fdd0a969508fb86184eec711151d1bb4 514 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 290 305 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VSVS12_01892 fdd0a969508fb86184eec711151d1bb4 514 Gene3D G3DSA:1.10.8.60 375 454 1.6E-15 T 11-10-2018 VSVS12_01892 fdd0a969508fb86184eec711151d1bb4 514 SUPERFAMILY SSF52540 205 444 1.93E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01892 fdd0a969508fb86184eec711151d1bb4 514 Gene3D G3DSA:3.30.70.260 1 80 4.5E-26 T 11-10-2018 VSVS12_01892 fdd0a969508fb86184eec711151d1bb4 514 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 417 426 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VSVS12_01892 fdd0a969508fb86184eec711151d1bb4 514 SUPERFAMILY SSF46689 460 512 7.77E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_01892 fdd0a969508fb86184eec711151d1bb4 514 Gene3D G3DSA:3.30.450.20 82 187 5.9E-23 T 11-10-2018 VSVS12_01892 fdd0a969508fb86184eec711151d1bb4 514 Pfam PF13188 PAS domain 84 136 1.0E-5 T 11-10-2018 IPR000014 PAS domain VSVS12_01892 fdd0a969508fb86184eec711151d1bb4 514 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 465 513 1.3E-27 T 11-10-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 VSVS12_01892 fdd0a969508fb86184eec711151d1bb4 514 SUPERFAMILY SSF55021 1 68 2.34E-6 T 11-10-2018 VSVS12_01892 fdd0a969508fb86184eec711151d1bb4 514 SUPERFAMILY SSF55785 83 160 1.05E-7 T 11-10-2018 IPR035965 PAS domain superfamily VSVS12_01892 fdd0a969508fb86184eec711151d1bb4 514 Gene3D G3DSA:1.10.10.60 460 513 9.6E-25 T 11-10-2018 VSVS12_01892 fdd0a969508fb86184eec711151d1bb4 514 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 229 242 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VSVS12_01892 fdd0a969508fb86184eec711151d1bb4 514 SMART SM00091 80 146 2.8E-8 T 11-10-2018 IPR000014 PAS domain VSVS12_01892 fdd0a969508fb86184eec711151d1bb4 514 Pfam PF00158 Sigma-54 interaction domain 206 370 2.9E-57 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VSVS12_01892 fdd0a969508fb86184eec711151d1bb4 514 Gene3D G3DSA:3.40.50.300 196 374 1.0E-57 T 11-10-2018 VSVS12_01892 fdd0a969508fb86184eec711151d1bb4 514 SMART SM00382 225 368 5.2E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_03523 f71a315c99cfde59de2cfff80d9eac51 151 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 67 99 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VSVS12_03523 f71a315c99cfde59de2cfff80d9eac51 151 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 4 108 9.1E-25 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain VSVS12_03523 f71a315c99cfde59de2cfff80d9eac51 151 Gene3D G3DSA:3.40.140.10 2 147 3.2E-39 T 11-10-2018 VSVS12_03523 f71a315c99cfde59de2cfff80d9eac51 151 SUPERFAMILY SSF53927 7 126 1.44E-29 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VSVS12_03523 f71a315c99cfde59de2cfff80d9eac51 151 PIRSF PIRSF006019 1 148 1.2E-43 T 11-10-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 VSVS12_01654 c6fdc03841195229f9119e4af75266f4 161 SUPERFAMILY SSF89963 89 161 3.14E-28 T 11-10-2018 IPR036183 YajQ-like superfamily VSVS12_01654 c6fdc03841195229f9119e4af75266f4 161 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 161 28.493 T 11-10-2018 IPR007551 Protein of unknown function DUF520 VSVS12_01654 c6fdc03841195229f9119e4af75266f4 161 Gene3D G3DSA:3.30.70.990 9 98 8.8E-60 T 11-10-2018 IPR035570 UPF0234, N-terminal VSVS12_01654 c6fdc03841195229f9119e4af75266f4 161 Pfam PF04461 Protein of unknown function (DUF520) 2 160 1.7E-63 T 11-10-2018 IPR007551 Protein of unknown function DUF520 VSVS12_01654 c6fdc03841195229f9119e4af75266f4 161 SUPERFAMILY SSF89963 2 86 3.66E-29 T 11-10-2018 IPR036183 YajQ-like superfamily VSVS12_01654 c6fdc03841195229f9119e4af75266f4 161 Gene3D G3DSA:3.30.70.860 3 160 8.8E-60 T 11-10-2018 IPR035571 UPF0234-like, C-terminal VSVS12_03460 3ed8c0545f554f31a464d94a17389ec3 522 Gene3D G3DSA:1.10.10.60 464 522 2.8E-12 T 11-10-2018 VSVS12_03460 3ed8c0545f554f31a464d94a17389ec3 522 SMART SM00065 20 168 2.8E-9 T 11-10-2018 IPR003018 GAF domain GO:0005515 VSVS12_03460 3ed8c0545f554f31a464d94a17389ec3 522 Gene3D G3DSA:1.10.8.60 359 425 2.5E-19 T 11-10-2018 VSVS12_03460 3ed8c0545f554f31a464d94a17389ec3 522 SMART SM00382 208 351 3.8E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_03460 3ed8c0545f554f31a464d94a17389ec3 522 SUPERFAMILY SSF52540 187 422 2.96E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03460 3ed8c0545f554f31a464d94a17389ec3 522 Pfam PF01590 GAF domain 24 154 7.1E-9 T 11-10-2018 IPR003018 GAF domain GO:0005515 VSVS12_03460 3ed8c0545f554f31a464d94a17389ec3 522 Gene3D G3DSA:3.40.50.300 175 358 2.7E-62 T 11-10-2018 VSVS12_03460 3ed8c0545f554f31a464d94a17389ec3 522 SUPERFAMILY SSF55781 9 167 6.54E-17 T 11-10-2018 VSVS12_03460 3ed8c0545f554f31a464d94a17389ec3 522 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 401 410 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VSVS12_03460 3ed8c0545f554f31a464d94a17389ec3 522 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 212 225 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VSVS12_03460 3ed8c0545f554f31a464d94a17389ec3 522 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 274 289 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VSVS12_03460 3ed8c0545f554f31a464d94a17389ec3 522 SUPERFAMILY SSF46689 471 521 7.17E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_03460 3ed8c0545f554f31a464d94a17389ec3 522 Gene3D G3DSA:3.30.450.40 5 172 6.4E-18 T 11-10-2018 IPR029016 GAF-like domain superfamily VSVS12_03460 3ed8c0545f554f31a464d94a17389ec3 522 Pfam PF00158 Sigma-54 interaction domain 188 354 4.1E-67 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VSVS12_01171 b876d3af3b0696b2cfd9faf613bd1f77 226 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 28 180 1.7E-28 T 11-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VSVS12_03194 9164c8f977e9cd1744793118e009b871 698 Gene3D G3DSA:3.40.50.12320 197 360 6.8E-44 T 11-10-2018 VSVS12_03194 9164c8f977e9cd1744793118e009b871 698 SUPERFAMILY SSF55729 400 547 1.44E-9 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_03194 9164c8f977e9cd1744793118e009b871 698 Pfam PF13718 GNAT acetyltransferase 2 405 521 3.1E-18 T 11-10-2018 IPR000182 GNAT domain VSVS12_03194 9164c8f977e9cd1744793118e009b871 698 SUPERFAMILY SSF52540 177 313 1.18E-10 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03194 9164c8f977e9cd1744793118e009b871 698 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 19 698 40.78 T 11-10-2018 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 VSVS12_03194 9164c8f977e9cd1744793118e009b871 698 Gene3D G3DSA:3.40.50.11040 4 165 5.3E-16 T 11-10-2018 VSVS12_03194 9164c8f977e9cd1744793118e009b871 698 Gene3D G3DSA:3.40.630.30 364 565 3.9E-65 T 11-10-2018 VSVS12_03194 9164c8f977e9cd1744793118e009b871 698 Pfam PF08351 Domain of unknown function (DUF1726) 65 111 5.8E-9 T 11-10-2018 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal Reactome: R-HSA-6790901 VSVS12_03194 9164c8f977e9cd1744793118e009b871 698 Pfam PF05127 Helicase 199 370 3.2E-54 T 11-10-2018 IPR007807 Helicase domain Reactome: R-HSA-6790901 VSVS12_00653 0b5a0e7c6018c9866474790f8927cd31 320 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 225 241 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VSVS12_00653 0b5a0e7c6018c9866474790f8927cd31 320 SUPERFAMILY SSF51735 103 290 1.18E-52 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_00653 0b5a0e7c6018c9866474790f8927cd31 320 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 32 320 1.1E-23 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 VSVS12_00653 0b5a0e7c6018c9866474790f8927cd31 320 Gene3D G3DSA:3.40.50.720 27 317 8.7E-115 T 11-10-2018 VSVS12_00653 0b5a0e7c6018c9866474790f8927cd31 320 SUPERFAMILY SSF52283 4 139 6.8E-30 T 11-10-2018 VSVS12_00653 0b5a0e7c6018c9866474790f8927cd31 320 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 196 218 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VSVS12_00653 0b5a0e7c6018c9866474790f8927cd31 320 Gene3D G3DSA:3.40.50.720 99 288 8.7E-115 T 11-10-2018 VSVS12_00653 0b5a0e7c6018c9866474790f8927cd31 320 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 289 9.0E-56 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VSVS12_01344 b09453da5c8618187cee7cc266ce343f 279 SUPERFAMILY SSF48008 79 270 1.26E-56 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VSVS12_01344 b09453da5c8618187cee7cc266ce343f 279 SUPERFAMILY SSF46785 12 74 1.82E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_01344 b09453da5c8618187cee7cc266ce343f 279 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 279 137.32 T 11-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 VSVS12_01344 b09453da5c8618187cee7cc266ce343f 279 Pfam PF07840 FadR C-terminal domain 72 274 1.2E-67 T 11-10-2018 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 VSVS12_01344 b09453da5c8618187cee7cc266ce343f 279 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 71 3.4E-20 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VSVS12_01344 b09453da5c8618187cee7cc266ce343f 279 Gene3D G3DSA:1.10.10.10 1 79 2.6E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_01344 b09453da5c8618187cee7cc266ce343f 279 SMART SM00345 12 71 2.0E-22 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VSVS12_01344 b09453da5c8618187cee7cc266ce343f 279 Gene3D G3DSA:1.20.120.530 80 278 5.9E-34 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VSVS12_01344 b09453da5c8618187cee7cc266ce343f 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 3.5E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VSVS12_01344 b09453da5c8618187cee7cc266ce343f 279 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 3.5E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VSVS12_01344 b09453da5c8618187cee7cc266ce343f 279 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 276 6.8E-117 T 11-10-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 VSVS12_01778 bd3669e87965259f31359acc84895c52 238 Gene3D G3DSA:2.160.10.10 54 238 2.7E-35 T 11-10-2018 VSVS12_01778 bd3669e87965259f31359acc84895c52 238 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 187 215 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VSVS12_01778 bd3669e87965259f31359acc84895c52 238 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 180 213 2.6E-8 T 11-10-2018 IPR001451 Hexapeptide repeat VSVS12_01778 bd3669e87965259f31359acc84895c52 238 SUPERFAMILY SSF51161 41 236 9.43E-33 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily VSVS12_02491 a42d0d3fc9baa6859aaa6d09297cb607 646 Gene3D G3DSA:1.10.287.950 325 646 1.5E-66 T 11-10-2018 VSVS12_02491 a42d0d3fc9baa6859aaa6d09297cb607 646 SMART SM01358 33 286 3.5E-41 T 11-10-2018 IPR032255 Helical bimodular sensor domain VSVS12_02491 a42d0d3fc9baa6859aaa6d09297cb607 646 SMART SM00283 384 645 6.1E-66 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_02491 a42d0d3fc9baa6859aaa6d09297cb607 646 SUPERFAMILY SSF58104 360 646 1.01E-67 T 11-10-2018 VSVS12_02491 a42d0d3fc9baa6859aaa6d09297cb607 646 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 447 608 4.7E-41 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_02491 a42d0d3fc9baa6859aaa6d09297cb607 646 Pfam PF12729 Four helix bundle sensory module for signal transduction 1 164 1.1E-7 T 11-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VSVS12_02845 9cb68e354b4828ae057950af161397fe 384 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 2.6E-43 T 11-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VSVS12_02845 9cb68e354b4828ae057950af161397fe 384 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 379 1.3E-195 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VSVS12_02845 9cb68e354b4828ae057950af161397fe 384 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 58.514 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VSVS12_02845 9cb68e354b4828ae057950af161397fe 384 SUPERFAMILY SSF55973 3 109 1.06E-47 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VSVS12_02845 9cb68e354b4828ae057950af161397fe 384 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 1.8E-43 T 11-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VSVS12_02845 9cb68e354b4828ae057950af161397fe 384 SUPERFAMILY SSF55973 233 382 9.42E-71 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VSVS12_02845 9cb68e354b4828ae057950af161397fe 384 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 369 2.9E-69 T 11-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VSVS12_02845 9cb68e354b4828ae057950af161397fe 384 Gene3D G3DSA:3.30.300.10 102 373 1.7E-177 T 11-10-2018 VSVS12_02845 9cb68e354b4828ae057950af161397fe 384 Gene3D G3DSA:3.30.300.10 5 233 1.7E-177 T 11-10-2018 VSVS12_02845 9cb68e354b4828ae057950af161397fe 384 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VSVS12_02845 9cb68e354b4828ae057950af161397fe 384 SUPERFAMILY SSF55973 111 232 5.49E-50 T 11-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VSVS12_02845 9cb68e354b4828ae057950af161397fe 384 Gene3D G3DSA:3.30.300.10 11 270 1.7E-177 T 11-10-2018 VSVS12_02845 9cb68e354b4828ae057950af161397fe 384 PIRSF PIRSF000497 1 381 2.8E-175 T 11-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VSVS12_02845 9cb68e354b4828ae057950af161397fe 384 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 11-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 VSVS12_01274 fe11bb037803cc2e986b3db8902e9192 258 SMART SM00420 6 58 1.5E-11 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VSVS12_01274 fe11bb037803cc2e986b3db8902e9192 258 SMART SM01134 73 234 1.5E-66 T 11-10-2018 VSVS12_01274 fe11bb037803cc2e986b3db8902e9192 258 SUPERFAMILY SSF100950 74 234 3.14E-33 T 11-10-2018 IPR037171 NagB/RpiA transferase-like VSVS12_01274 fe11bb037803cc2e986b3db8902e9192 258 Pfam PF00455 DeoR C terminal sensor domain 75 233 3.7E-51 T 11-10-2018 IPR014036 DeoR C-terminal sensor domain VSVS12_01274 fe11bb037803cc2e986b3db8902e9192 258 SUPERFAMILY SSF46785 5 69 1.06E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_01274 fe11bb037803cc2e986b3db8902e9192 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 5.3E-5 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VSVS12_01274 fe11bb037803cc2e986b3db8902e9192 258 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 5.3E-5 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VSVS12_01274 fe11bb037803cc2e986b3db8902e9192 258 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 3.4E-14 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VSVS12_00419 a2732954abee5e4e7d9830817665fe0c 144 Gene3D G3DSA:3.40.250.10 22 143 2.5E-26 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily VSVS12_00419 a2732954abee5e4e7d9830817665fe0c 144 SMART SM00450 40 138 3.2E-22 T 11-10-2018 IPR001763 Rhodanese-like domain VSVS12_00419 a2732954abee5e4e7d9830817665fe0c 144 SUPERFAMILY SSF52821 16 143 2.36E-31 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily VSVS12_00419 a2732954abee5e4e7d9830817665fe0c 144 Pfam PF00581 Rhodanese-like domain 43 135 8.0E-18 T 11-10-2018 IPR001763 Rhodanese-like domain VSVS12_03430 b7d9f87d0e06340753f3db82dbb45109 131 SUPERFAMILY SSF52821 27 129 1.96E-22 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily VSVS12_03430 b7d9f87d0e06340753f3db82dbb45109 131 SMART SM00450 30 127 3.4E-12 T 11-10-2018 IPR001763 Rhodanese-like domain VSVS12_03430 b7d9f87d0e06340753f3db82dbb45109 131 Pfam PF00581 Rhodanese-like domain 41 122 7.7E-10 T 11-10-2018 IPR001763 Rhodanese-like domain VSVS12_03430 b7d9f87d0e06340753f3db82dbb45109 131 Gene3D G3DSA:3.40.250.10 11 128 4.2E-27 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily VSVS12_03675 c61e5e28d389a721bc039dcc29e8896f 4081 Gene3D G3DSA:2.150.10.10 3908 4056 1.6E-24 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_03675 c61e5e28d389a721bc039dcc29e8896f 4081 SUPERFAMILY SSF51120 3909 4045 6.54E-27 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_03675 c61e5e28d389a721bc039dcc29e8896f 4081 SUPERFAMILY SSF141072 2093 2211 5.1E-8 T 11-10-2018 IPR038081 CalX-like domain superfamily VSVS12_03675 c61e5e28d389a721bc039dcc29e8896f 4081 SUPERFAMILY SSF141072 869 984 1.57E-5 T 11-10-2018 IPR038081 CalX-like domain superfamily VSVS12_03675 c61e5e28d389a721bc039dcc29e8896f 4081 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 3947 3965 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VSVS12_03675 c61e5e28d389a721bc039dcc29e8896f 4081 SUPERFAMILY SSF141072 1957 2072 3.14E-6 T 11-10-2018 IPR038081 CalX-like domain superfamily VSVS12_03675 c61e5e28d389a721bc039dcc29e8896f 4081 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 3938 3956 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VSVS12_03675 c61e5e28d389a721bc039dcc29e8896f 4081 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3959 3976 0.0051 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03675 c61e5e28d389a721bc039dcc29e8896f 4081 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3914 3931 1.8 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03675 c61e5e28d389a721bc039dcc29e8896f 4081 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 3942 3958 0.094 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03675 c61e5e28d389a721bc039dcc29e8896f 4081 SUPERFAMILY SSF53300 3574 3771 9.85E-6 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VSVS12_03675 c61e5e28d389a721bc039dcc29e8896f 4081 SUPERFAMILY SSF141072 1005 1108 1.96E-10 T 11-10-2018 IPR038081 CalX-like domain superfamily VSVS12_03675 c61e5e28d389a721bc039dcc29e8896f 4081 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 3956 3974 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VSVS12_03675 c61e5e28d389a721bc039dcc29e8896f 4081 Gene3D G3DSA:3.40.50.410 3573 3785 1.9E-7 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VSVS12_03675 c61e5e28d389a721bc039dcc29e8896f 4081 PRINTS PR00313 NodO calcium binding signature 3951 3959 2.0E-7 T 11-10-2018 VSVS12_03675 c61e5e28d389a721bc039dcc29e8896f 4081 PRINTS PR00313 NodO calcium binding signature 3960 3968 2.0E-7 T 11-10-2018 VSVS12_03675 c61e5e28d389a721bc039dcc29e8896f 4081 PRINTS PR00313 NodO calcium binding signature 3939 3950 2.0E-7 T 11-10-2018 VSVS12_03675 c61e5e28d389a721bc039dcc29e8896f 4081 PRINTS PR00313 NodO calcium binding signature 3969 3978 2.0E-7 T 11-10-2018 VSVS12_00845 ecba5a81039185b0aecaf6f3be91743e 490 Pfam PF01546 Peptidase family M20/M25/M40 77 473 1.7E-19 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 VSVS12_00845 ecba5a81039185b0aecaf6f3be91743e 490 PRINTS PR00934 X-His dipeptidase (M25) signature 163 181 3.4E-87 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VSVS12_00845 ecba5a81039185b0aecaf6f3be91743e 490 PRINTS PR00934 X-His dipeptidase (M25) signature 255 274 3.4E-87 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VSVS12_00845 ecba5a81039185b0aecaf6f3be91743e 490 PRINTS PR00934 X-His dipeptidase (M25) signature 105 123 3.4E-87 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VSVS12_00845 ecba5a81039185b0aecaf6f3be91743e 490 PRINTS PR00934 X-His dipeptidase (M25) signature 367 385 3.4E-87 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VSVS12_00845 ecba5a81039185b0aecaf6f3be91743e 490 PRINTS PR00934 X-His dipeptidase (M25) signature 210 227 3.4E-87 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VSVS12_00845 ecba5a81039185b0aecaf6f3be91743e 490 PRINTS PR00934 X-His dipeptidase (M25) signature 432 448 3.4E-87 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VSVS12_00845 ecba5a81039185b0aecaf6f3be91743e 490 PRINTS PR00934 X-His dipeptidase (M25) signature 454 476 3.4E-87 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VSVS12_00845 ecba5a81039185b0aecaf6f3be91743e 490 PRINTS PR00934 X-His dipeptidase (M25) signature 139 156 3.4E-87 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VSVS12_00845 ecba5a81039185b0aecaf6f3be91743e 490 PRINTS PR00934 X-His dipeptidase (M25) signature 84 103 3.4E-87 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VSVS12_00845 ecba5a81039185b0aecaf6f3be91743e 490 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 14 486 1.6E-175 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VSVS12_00845 ecba5a81039185b0aecaf6f3be91743e 490 PIRSF PIRSF016599 5 489 8.6E-209 T 11-10-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 VSVS12_00845 ecba5a81039185b0aecaf6f3be91743e 490 SUPERFAMILY SSF53187 16 486 7.65E-60 T 11-10-2018 VSVS12_00845 ecba5a81039185b0aecaf6f3be91743e 490 Pfam PF07687 Peptidase dimerisation domain 212 295 8.7E-7 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain VSVS12_00845 ecba5a81039185b0aecaf6f3be91743e 490 Gene3D G3DSA:3.40.630.10 376 490 1.5E-22 T 11-10-2018 VSVS12_00845 ecba5a81039185b0aecaf6f3be91743e 490 Gene3D G3DSA:3.40.630.10 1 233 1.1E-62 T 11-10-2018 VSVS12_01556 ec569710b26382c7822ccdc706f8bfb3 161 SUPERFAMILY SSF159894 1 68 2.25E-13 T 11-10-2018 VSVS12_01556 ec569710b26382c7822ccdc706f8bfb3 161 Gene3D G3DSA:3.30.1460.30 1 69 7.6E-9 T 11-10-2018 VSVS12_01556 ec569710b26382c7822ccdc706f8bfb3 161 Gene3D G3DSA:1.10.150.20 79 161 3.3E-19 T 11-10-2018 VSVS12_01556 ec569710b26382c7822ccdc706f8bfb3 161 Pfam PF04993 TfoX N-terminal domain 1 67 6.9E-13 T 11-10-2018 IPR007076 TfoX, N-terminal VSVS12_01556 ec569710b26382c7822ccdc706f8bfb3 161 Pfam PF04994 TfoX C-terminal domain 80 159 7.3E-29 T 11-10-2018 IPR007077 TfoX, C-terminal VSVS12_03980 231ef4837875dba61441223314cb80cf 302 Gene3D G3DSA:3.40.50.1980 24 280 4.8E-89 T 11-10-2018 VSVS12_03980 231ef4837875dba61441223314cb80cf 302 Pfam PF01497 Periplasmic binding protein 40 275 4.9E-22 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain VSVS12_03980 231ef4837875dba61441223314cb80cf 302 Gene3D G3DSA:3.40.50.1980 170 274 4.8E-89 T 11-10-2018 VSVS12_03980 231ef4837875dba61441223314cb80cf 302 SUPERFAMILY SSF53807 17 282 7.06E-55 T 11-10-2018 VSVS12_03770 44077de26ee3c6c6f30af53bca226b21 106 SUPERFAMILY SSF54913 2 105 5.93E-32 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta VSVS12_03770 44077de26ee3c6c6f30af53bca226b21 106 Gene3D G3DSA:3.30.70.120 1 104 2.4E-32 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VSVS12_03770 44077de26ee3c6c6f30af53bca226b21 106 Pfam PF03091 CutA1 divalent ion tolerance protein 6 102 1.2E-30 T 11-10-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 VSVS12_02412 1e03fed58a40df265498701692fd1a20 637 SUPERFAMILY SSF53067 186 381 1.04E-64 T 11-10-2018 VSVS12_02412 1e03fed58a40df265498701692fd1a20 637 SUPERFAMILY SSF100934 534 607 1.26E-5 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 VSVS12_02412 1e03fed58a40df265498701692fd1a20 637 Gene3D G3DSA:3.30.420.40 5 378 7.9E-164 T 11-10-2018 VSVS12_02412 1e03fed58a40df265498701692fd1a20 637 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 2.1E-280 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 VSVS12_02412 1e03fed58a40df265498701692fd1a20 637 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 336 350 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VSVS12_02412 1e03fed58a40df265498701692fd1a20 637 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VSVS12_02412 1e03fed58a40df265498701692fd1a20 637 Gene3D G3DSA:3.30.420.40 179 365 7.9E-164 T 11-10-2018 VSVS12_02412 1e03fed58a40df265498701692fd1a20 637 Pfam PF00012 Hsp70 protein 4 601 2.2E-257 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VSVS12_02412 1e03fed58a40df265498701692fd1a20 637 Gene3D G3DSA:3.90.640.10 228 315 7.9E-164 T 11-10-2018 VSVS12_02412 1e03fed58a40df265498701692fd1a20 637 SUPERFAMILY SSF53067 1 182 2.59E-64 T 11-10-2018 VSVS12_02412 1e03fed58a40df265498701692fd1a20 637 SUPERFAMILY SSF100920 383 539 3.66E-58 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 VSVS12_02412 1e03fed58a40df265498701692fd1a20 637 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 632 35.764 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 VSVS12_02412 1e03fed58a40df265498701692fd1a20 637 Gene3D G3DSA:1.20.1270.10 523 602 1.1E-25 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 VSVS12_02412 1e03fed58a40df265498701692fd1a20 637 PRINTS PR00301 70kDa heat shock protein signature 53 61 3.3E-78 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VSVS12_02412 1e03fed58a40df265498701692fd1a20 637 PRINTS PR00301 70kDa heat shock protein signature 3 16 3.3E-78 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VSVS12_02412 1e03fed58a40df265498701692fd1a20 637 PRINTS PR00301 70kDa heat shock protein signature 197 207 3.3E-78 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VSVS12_02412 1e03fed58a40df265498701692fd1a20 637 PRINTS PR00301 70kDa heat shock protein signature 387 406 3.3E-78 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VSVS12_02412 1e03fed58a40df265498701692fd1a20 637 PRINTS PR00301 70kDa heat shock protein signature 137 157 3.3E-78 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VSVS12_02412 1e03fed58a40df265498701692fd1a20 637 PRINTS PR00301 70kDa heat shock protein signature 333 349 3.3E-78 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VSVS12_02412 1e03fed58a40df265498701692fd1a20 637 PRINTS PR00301 70kDa heat shock protein signature 31 43 3.3E-78 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VSVS12_02412 1e03fed58a40df265498701692fd1a20 637 PRINTS PR00301 70kDa heat shock protein signature 364 384 3.3E-78 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VSVS12_02412 1e03fed58a40df265498701692fd1a20 637 PRINTS PR00301 70kDa heat shock protein signature 468 484 3.3E-78 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VSVS12_02412 1e03fed58a40df265498701692fd1a20 637 Gene3D G3DSA:2.60.34.10 382 522 1.7E-63 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 VSVS12_02412 1e03fed58a40df265498701692fd1a20 637 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VSVS12_02258 8220bf7fabed3ab90440691bd0fd1af8 154 Gene3D G3DSA:3.40.50.1240 1 154 7.6E-35 T 11-10-2018 IPR029033 Histidine phosphatase superfamily VSVS12_02258 8220bf7fabed3ab90440691bd0fd1af8 154 SMART SM00855 2 116 6.7E-5 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 VSVS12_02258 8220bf7fabed3ab90440691bd0fd1af8 154 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 154 4.8E-38 T 11-10-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0101006 VSVS12_02258 8220bf7fabed3ab90440691bd0fd1af8 154 SUPERFAMILY SSF53254 1 149 2.78E-22 T 11-10-2018 IPR029033 Histidine phosphatase superfamily VSVS12_02258 8220bf7fabed3ab90440691bd0fd1af8 154 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 67 1.1E-8 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 VSVS12_00201 c80ffbf5445b69c0944184e8bf3dc16d 85 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 23 75 3.0E-23 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor VSVS12_00201 c80ffbf5445b69c0944184e8bf3dc16d 85 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 8 76 24.6 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor VSVS12_00201 c80ffbf5445b69c0944184e8bf3dc16d 85 Pfam PF01809 Haemolytic domain 11 75 1.9E-28 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor VSVS12_00201 c80ffbf5445b69c0944184e8bf3dc16d 85 SMART SM01234 8 75 5.6E-40 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor VSVS12_00201 c80ffbf5445b69c0944184e8bf3dc16d 85 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 13 82 2.8E-31 T 11-10-2018 IPR002696 Putative membrane protein insertion efficiency factor VSVS12_01480 1be33f1a8501bd7438680a621eac4d32 631 Gene3D G3DSA:3.90.640.10 228 315 2.9E-165 T 11-10-2018 VSVS12_01480 1be33f1a8501bd7438680a621eac4d32 631 Pfam PF00012 Hsp70 protein 4 601 2.5E-257 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VSVS12_01480 1be33f1a8501bd7438680a621eac4d32 631 SUPERFAMILY SSF53067 186 381 2.98E-66 T 11-10-2018 VSVS12_01480 1be33f1a8501bd7438680a621eac4d32 631 SUPERFAMILY SSF100934 534 607 6.67E-5 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 VSVS12_01480 1be33f1a8501bd7438680a621eac4d32 631 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 191 204 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VSVS12_01480 1be33f1a8501bd7438680a621eac4d32 631 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 336 350 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VSVS12_01480 1be33f1a8501bd7438680a621eac4d32 631 Gene3D G3DSA:1.20.1270.10 523 602 9.4E-24 T 11-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 VSVS12_01480 1be33f1a8501bd7438680a621eac4d32 631 Gene3D G3DSA:3.30.420.40 5 378 2.9E-165 T 11-10-2018 VSVS12_01480 1be33f1a8501bd7438680a621eac4d32 631 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 602 1.5E-280 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 VSVS12_01480 1be33f1a8501bd7438680a621eac4d32 631 Gene3D G3DSA:2.60.34.10 382 522 8.3E-64 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 VSVS12_01480 1be33f1a8501bd7438680a621eac4d32 631 PRINTS PR00301 70kDa heat shock protein signature 53 61 1.6E-77 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VSVS12_01480 1be33f1a8501bd7438680a621eac4d32 631 PRINTS PR00301 70kDa heat shock protein signature 364 384 1.6E-77 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VSVS12_01480 1be33f1a8501bd7438680a621eac4d32 631 PRINTS PR00301 70kDa heat shock protein signature 333 349 1.6E-77 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VSVS12_01480 1be33f1a8501bd7438680a621eac4d32 631 PRINTS PR00301 70kDa heat shock protein signature 468 484 1.6E-77 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VSVS12_01480 1be33f1a8501bd7438680a621eac4d32 631 PRINTS PR00301 70kDa heat shock protein signature 387 406 1.6E-77 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VSVS12_01480 1be33f1a8501bd7438680a621eac4d32 631 PRINTS PR00301 70kDa heat shock protein signature 137 157 1.6E-77 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VSVS12_01480 1be33f1a8501bd7438680a621eac4d32 631 PRINTS PR00301 70kDa heat shock protein signature 3 16 1.6E-77 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VSVS12_01480 1be33f1a8501bd7438680a621eac4d32 631 PRINTS PR00301 70kDa heat shock protein signature 31 43 1.6E-77 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VSVS12_01480 1be33f1a8501bd7438680a621eac4d32 631 PRINTS PR00301 70kDa heat shock protein signature 197 207 1.6E-77 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VSVS12_01480 1be33f1a8501bd7438680a621eac4d32 631 SUPERFAMILY SSF53067 1 182 1.58E-64 T 11-10-2018 VSVS12_01480 1be33f1a8501bd7438680a621eac4d32 631 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 630 35.739 T 11-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 VSVS12_01480 1be33f1a8501bd7438680a621eac4d32 631 SUPERFAMILY SSF100920 383 539 5.62E-59 T 11-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 VSVS12_01480 1be33f1a8501bd7438680a621eac4d32 631 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VSVS12_01480 1be33f1a8501bd7438680a621eac4d32 631 Gene3D G3DSA:3.30.420.40 179 365 2.9E-165 T 11-10-2018 VSVS12_03632 e7a5f8440bbc428c2f5f265ac10dff6d 427 Pfam PF13183 4Fe-4S dicluster domain 31 95 2.4E-8 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VSVS12_03632 e7a5f8440bbc428c2f5f265ac10dff6d 427 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 81 92 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VSVS12_03632 e7a5f8440bbc428c2f5f265ac10dff6d 427 Gene3D G3DSA:1.10.1060.10 16 111 5.5E-8 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VSVS12_03632 e7a5f8440bbc428c2f5f265ac10dff6d 427 Pfam PF02754 Cysteine-rich domain 191 277 9.6E-15 T 11-10-2018 IPR004017 Cysteine-rich domain VSVS12_03632 e7a5f8440bbc428c2f5f265ac10dff6d 427 Pfam PF02754 Cysteine-rich domain 322 404 2.1E-11 T 11-10-2018 IPR004017 Cysteine-rich domain VSVS12_03632 e7a5f8440bbc428c2f5f265ac10dff6d 427 SUPERFAMILY SSF46548 30 108 2.09E-17 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VSVS12_03632 e7a5f8440bbc428c2f5f265ac10dff6d 427 TIGRFAM TIGR03379 glycerol3P_GlpC: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit 28 423 4.0E-219 T 11-10-2018 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit GO:0009061|GO:0016020 VSVS12_01347 66df4b4570c7a9922ec7e8a7e76e2b2a 519 SUPERFAMILY SSF46689 467 517 4.26E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_01347 66df4b4570c7a9922ec7e8a7e76e2b2a 519 SUPERFAMILY SSF55781 11 169 5.45E-17 T 11-10-2018 VSVS12_01347 66df4b4570c7a9922ec7e8a7e76e2b2a 519 Gene3D G3DSA:1.10.10.60 465 519 4.4E-6 T 11-10-2018 VSVS12_01347 66df4b4570c7a9922ec7e8a7e76e2b2a 519 SUPERFAMILY SSF52540 197 442 8.14E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01347 66df4b4570c7a9922ec7e8a7e76e2b2a 519 Gene3D G3DSA:3.40.50.300 184 368 2.3E-65 T 11-10-2018 VSVS12_01347 66df4b4570c7a9922ec7e8a7e76e2b2a 519 SMART SM00065 25 174 1.3E-6 T 11-10-2018 IPR003018 GAF domain GO:0005515 VSVS12_01347 66df4b4570c7a9922ec7e8a7e76e2b2a 519 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 411 420 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VSVS12_01347 66df4b4570c7a9922ec7e8a7e76e2b2a 519 Pfam PF00158 Sigma-54 interaction domain 198 365 9.2E-70 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VSVS12_01347 66df4b4570c7a9922ec7e8a7e76e2b2a 519 SMART SM00382 218 362 6.2E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_01347 66df4b4570c7a9922ec7e8a7e76e2b2a 519 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 284 299 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VSVS12_01347 66df4b4570c7a9922ec7e8a7e76e2b2a 519 Gene3D G3DSA:3.30.450.40 10 178 8.1E-15 T 11-10-2018 IPR029016 GAF-like domain superfamily VSVS12_01347 66df4b4570c7a9922ec7e8a7e76e2b2a 519 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 222 235 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VSVS12_01347 66df4b4570c7a9922ec7e8a7e76e2b2a 519 Gene3D G3DSA:1.10.8.60 369 436 8.5E-16 T 11-10-2018 VSVS12_01245 dddcdb88f73555e47339ed287f3650bc 338 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 5 333 32.221 T 11-10-2018 IPR003770 Endolytic murein transglycosylase VSVS12_01245 dddcdb88f73555e47339ed287f3650bc 338 Pfam PF02618 YceG-like family 43 328 4.0E-81 T 11-10-2018 IPR003770 Endolytic murein transglycosylase VSVS12_01245 dddcdb88f73555e47339ed287f3650bc 338 Gene3D G3DSA:3.30.160.60 302 338 4.6E-18 T 11-10-2018 VSVS12_01245 dddcdb88f73555e47339ed287f3650bc 338 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 4 335 6.5E-103 T 11-10-2018 IPR003770 Endolytic murein transglycosylase VSVS12_01245 dddcdb88f73555e47339ed287f3650bc 338 Gene3D G3DSA:1.10.8.1150 38 110 5.1E-8 T 11-10-2018 VSVS12_00770 93b6aa2b6ae1caa77758e1063a83c5b4 244 Gene3D G3DSA:3.40.50.2300 1 122 6.0E-31 T 11-10-2018 VSVS12_00770 93b6aa2b6ae1caa77758e1063a83c5b4 244 Pfam PF04397 LytTr DNA-binding domain 149 241 7.9E-24 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 VSVS12_00770 93b6aa2b6ae1caa77758e1063a83c5b4 244 SUPERFAMILY SSF52172 1 124 5.55E-32 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_00770 93b6aa2b6ae1caa77758e1063a83c5b4 244 Pfam PF00072 Response regulator receiver domain 5 112 1.8E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_00770 93b6aa2b6ae1caa77758e1063a83c5b4 244 SMART SM00850 148 242 2.7E-26 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 VSVS12_00770 93b6aa2b6ae1caa77758e1063a83c5b4 244 SMART SM00448 2 112 2.4E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_00770 93b6aa2b6ae1caa77758e1063a83c5b4 244 Gene3D G3DSA:2.40.50.1020 145 243 1.1E-10 T 11-10-2018 VSVS12_03515 64aafec1147c9233f47ad91c6863b465 674 Pfam PF00270 DEAD/DEAH box helicase 30 195 2.6E-49 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VSVS12_03515 64aafec1147c9233f47ad91c6863b465 674 Gene3D G3DSA:3.40.50.300 215 434 7.1E-54 T 11-10-2018 VSVS12_03515 64aafec1147c9233f47ad91c6863b465 674 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 1 556 41.583 T 11-10-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 VSVS12_03515 64aafec1147c9233f47ad91c6863b465 674 SMART SM00487 25 223 3.5E-62 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VSVS12_03515 64aafec1147c9233f47ad91c6863b465 674 Gene3D G3DSA:3.40.50.300 1 211 2.0E-74 T 11-10-2018 VSVS12_03515 64aafec1147c9233f47ad91c6863b465 674 SMART SM00490 259 340 1.1E-34 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_03515 64aafec1147c9233f47ad91c6863b465 674 SUPERFAMILY SSF52540 74 361 2.14E-74 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03515 64aafec1147c9233f47ad91c6863b465 674 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VSVS12_03515 64aafec1147c9233f47ad91c6863b465 674 Pfam PF00271 Helicase conserved C-terminal domain 232 340 1.5E-29 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_03515 64aafec1147c9233f47ad91c6863b465 674 Pfam PF03880 DbpA RNA binding domain 484 551 5.2E-15 T 11-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain VSVS12_03515 64aafec1147c9233f47ad91c6863b465 674 Gene3D G3DSA:3.30.70.330 485 554 3.0E-9 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily VSVS12_02993 5633556b6d3f91cd8cf7a9305d6857c5 308 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 100 273 7.9E-49 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VSVS12_02993 5633556b6d3f91cd8cf7a9305d6857c5 308 Gene3D G3DSA:3.40.50.720 92 277 6.3E-94 T 11-10-2018 VSVS12_02993 5633556b6d3f91cd8cf7a9305d6857c5 308 Gene3D G3DSA:3.40.50.720 35 299 6.3E-94 T 11-10-2018 VSVS12_02993 5633556b6d3f91cd8cf7a9305d6857c5 308 SUPERFAMILY SSF52283 18 109 2.3E-6 T 11-10-2018 VSVS12_02993 5633556b6d3f91cd8cf7a9305d6857c5 308 SUPERFAMILY SSF51735 92 274 1.38E-46 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_02057 bd54f33fa0c214a3b2eebd9cf146e192 211 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 38 110 1.4E-29 T 11-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 VSVS12_02057 bd54f33fa0c214a3b2eebd9cf146e192 211 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 61 110 2.0E-20 T 11-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 VSVS12_02057 bd54f33fa0c214a3b2eebd9cf146e192 211 SUPERFAMILY SSF141734 11 123 1.23E-44 T 11-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 VSVS12_02057 bd54f33fa0c214a3b2eebd9cf146e192 211 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 120 206 19.413 T 11-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 VSVS12_02057 bd54f33fa0c214a3b2eebd9cf146e192 211 SUPERFAMILY SSF101386 123 210 1.29E-25 T 11-10-2018 VSVS12_02057 bd54f33fa0c214a3b2eebd9cf146e192 211 Gene3D G3DSA:3.10.20.400 3 102 6.1E-34 T 11-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 VSVS12_02057 bd54f33fa0c214a3b2eebd9cf146e192 211 Gene3D G3DSA:1.10.287.1080 121 211 9.4E-30 T 11-10-2018 VSVS12_02057 bd54f33fa0c214a3b2eebd9cf146e192 211 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 13 211 37.074 T 11-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 VSVS12_02057 bd54f33fa0c214a3b2eebd9cf146e192 211 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 123 210 2.7E-18 T 11-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 VSVS12_02057 bd54f33fa0c214a3b2eebd9cf146e192 211 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 123 206 7.1E-32 T 11-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 VSVS12_02936 8edf9f13d4208080ad77f68ec743e4a5 1342 Gene3D G3DSA:3.90.1800.10 1251 1305 8.1E-11 T 11-10-2018 VSVS12_02936 8edf9f13d4208080ad77f68ec743e4a5 1342 Gene3D G3DSA:3.90.1110.10 158 277 5.8E-28 T 11-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VSVS12_02936 8edf9f13d4208080ad77f68ec743e4a5 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 233 4.7E-8 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VSVS12_02936 8edf9f13d4208080ad77f68ec743e4a5 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 336 454 5.9E-17 T 11-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VSVS12_02936 8edf9f13d4208080ad77f68ec743e4a5 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 2.9E-22 T 11-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VSVS12_02936 8edf9f13d4208080ad77f68ec743e4a5 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 7.3E-29 T 11-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VSVS12_02936 8edf9f13d4208080ad77f68ec743e4a5 1342 Gene3D G3DSA:2.40.270.10 1035 1241 4.5E-87 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VSVS12_02936 8edf9f13d4208080ad77f68ec743e4a5 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1341 12.294 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VSVS12_02936 8edf9f13d4208080ad77f68ec743e4a5 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 3.9E-57 T 11-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VSVS12_02936 8edf9f13d4208080ad77f68ec743e4a5 1342 Gene3D G3DSA:3.90.1110.10 301 441 5.8E-33 T 11-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VSVS12_02936 8edf9f13d4208080ad77f68ec743e4a5 1342 SUPERFAMILY SSF64484 11 1341 0.0 T 11-10-2018 VSVS12_02936 8edf9f13d4208080ad77f68ec743e4a5 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1338 0.0 T 11-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VSVS12_02936 8edf9f13d4208080ad77f68ec743e4a5 1342 Gene3D G3DSA:2.40.50.100 714 788 1.1E-32 T 11-10-2018 VSVS12_02936 8edf9f13d4208080ad77f68ec743e4a5 1342 Gene3D G3DSA:3.90.1100.10 19 157 3.0E-48 T 11-10-2018 VSVS12_02936 8edf9f13d4208080ad77f68ec743e4a5 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1265 1339 3.0E-27 T 11-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VSVS12_02936 8edf9f13d4208080ad77f68ec743e4a5 1342 Gene3D G3DSA:3.90.1100.10 646 713 2.7E-21 T 11-10-2018 VSVS12_02936 8edf9f13d4208080ad77f68ec743e4a5 1342 Gene3D G3DSA:3.90.1100.10 442 620 2.6E-65 T 11-10-2018 VSVS12_02936 8edf9f13d4208080ad77f68ec743e4a5 1342 Gene3D G3DSA:2.40.270.10 790 832 1.1E-6 T 11-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VSVS12_02936 8edf9f13d4208080ad77f68ec743e4a5 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1263 3.1E-156 T 11-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VSVS12_02936 8edf9f13d4208080ad77f68ec743e4a5 1342 Gene3D G3DSA:2.40.50.150 833 954 3.1E-44 T 11-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VSVS12_02936 8edf9f13d4208080ad77f68ec743e4a5 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 11-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VSVS12_04421 3df7e2505126996de845cd6eda1e4309 330 Gene3D G3DSA:2.40.10.10 25 104 5.3E-6 T 11-10-2018 VSVS12_04421 3df7e2505126996de845cd6eda1e4309 330 Pfam PF00089 Trypsin 35 204 6.5E-13 T 11-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 VSVS12_04421 3df7e2505126996de845cd6eda1e4309 330 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 48 53 - T 11-10-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 VSVS12_04421 3df7e2505126996de845cd6eda1e4309 330 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 299 318 0.0044 T 11-10-2018 IPR020008 GlyGly-CTERM domain VSVS12_04421 3df7e2505126996de845cd6eda1e4309 330 Gene3D G3DSA:2.40.10.10 105 210 2.5E-8 T 11-10-2018 VSVS12_04421 3df7e2505126996de845cd6eda1e4309 330 SUPERFAMILY SSF50494 1 208 1.37E-25 T 11-10-2018 IPR009003 Peptidase S1, PA clan VSVS12_04421 3df7e2505126996de845cd6eda1e4309 330 PRINTS PR00839 V8 serine protease family signature 170 182 1.6E-6 T 11-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 VSVS12_04421 3df7e2505126996de845cd6eda1e4309 330 PRINTS PR00839 V8 serine protease family signature 114 127 1.6E-6 T 11-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 VSVS12_04421 3df7e2505126996de845cd6eda1e4309 330 PRINTS PR00839 V8 serine protease family signature 37 54 1.6E-6 T 11-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 VSVS12_03874 cd497a910713d77c4eb94de57f9fada3 517 Gene3D G3DSA:3.40.50.720 3 371 7.2E-156 T 11-10-2018 VSVS12_03874 cd497a910713d77c4eb94de57f9fada3 517 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 2 517 1.3E-271 T 11-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 VSVS12_03874 cd497a910713d77c4eb94de57f9fada3 517 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 143 4.8E-46 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VSVS12_03874 cd497a910713d77c4eb94de57f9fada3 517 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 433 516 5.3E-36 T 11-10-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 VSVS12_03874 cd497a910713d77c4eb94de57f9fada3 517 Gene3D G3DSA:3.40.50.720 143 324 7.2E-156 T 11-10-2018 VSVS12_03874 cd497a910713d77c4eb94de57f9fada3 517 SUPERFAMILY SSF51735 143 320 1.97E-36 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_03874 cd497a910713d77c4eb94de57f9fada3 517 SMART SM01002 152 317 9.2E-82 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VSVS12_03874 cd497a910713d77c4eb94de57f9fada3 517 PIRSF PIRSF000203 1 516 5.4E-269 T 11-10-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0055114|GO:1902600 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 VSVS12_03874 cd497a910713d77c4eb94de57f9fada3 517 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 147 374 5.1E-74 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VSVS12_03874 cd497a910713d77c4eb94de57f9fada3 517 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 11-10-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 VSVS12_03874 cd497a910713d77c4eb94de57f9fada3 517 SMART SM01003 4 143 5.3E-68 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VSVS12_03874 cd497a910713d77c4eb94de57f9fada3 517 SUPERFAMILY SSF52283 1 174 5.61E-51 T 11-10-2018 VSVS12_04329 66a29dd1fad4ce7bdf00988934a9caab 176 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 38 173 1.3E-41 T 11-10-2018 IPR005247 YbhB/YbcL VSVS12_04329 66a29dd1fad4ce7bdf00988934a9caab 176 SUPERFAMILY SSF49777 20 175 4.19E-51 T 11-10-2018 IPR036610 PEBP-like superfamily VSVS12_04329 66a29dd1fad4ce7bdf00988934a9caab 176 Pfam PF01161 Phosphatidylethanolamine-binding protein 42 173 2.7E-37 T 11-10-2018 IPR008914 Phosphatidylethanolamine-binding protein VSVS12_04329 66a29dd1fad4ce7bdf00988934a9caab 176 Gene3D G3DSA:3.90.280.10 11 175 1.6E-56 T 11-10-2018 IPR036610 PEBP-like superfamily VSVS12_00376 cda176dd599239380f7fe5c582cbbe3f 375 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 25 373 2.9E-119 T 11-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VSVS12_00376 cda176dd599239380f7fe5c582cbbe3f 375 Gene3D G3DSA:3.40.50.2000 190 359 3.5E-151 T 11-10-2018 VSVS12_00376 cda176dd599239380f7fe5c582cbbe3f 375 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 5 373 1.4E-156 T 11-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 VSVS12_00376 cda176dd599239380f7fe5c582cbbe3f 375 SUPERFAMILY SSF53756 3 373 6.67E-135 T 11-10-2018 VSVS12_00376 cda176dd599239380f7fe5c582cbbe3f 375 Gene3D G3DSA:3.40.50.2000 5 370 3.5E-151 T 11-10-2018 VSVS12_02890 07ad9737fc19e984f71d3cea23c12988 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 5.1E-33 T 11-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal VSVS12_02890 07ad9737fc19e984f71d3cea23c12988 394 Gene3D G3DSA:2.40.30.10 338 393 1.1E-28 T 11-10-2018 VSVS12_02890 07ad9737fc19e984f71d3cea23c12988 394 SUPERFAMILY SSF50447 205 301 3.53E-30 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VSVS12_02890 07ad9737fc19e984f71d3cea23c12988 394 Gene3D G3DSA:3.40.50.300 1 203 2.7E-70 T 11-10-2018 VSVS12_02890 07ad9737fc19e984f71d3cea23c12988 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 1.0E-229 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VSVS12_02890 07ad9737fc19e984f71d3cea23c12988 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 1.5E-16 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VSVS12_02890 07ad9737fc19e984f71d3cea23c12988 394 SUPERFAMILY SSF52540 6 219 3.26E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02890 07ad9737fc19e984f71d3cea23c12988 394 SUPERFAMILY SSF50465 298 393 4.32E-35 T 11-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal VSVS12_02890 07ad9737fc19e984f71d3cea23c12988 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site VSVS12_02890 07ad9737fc19e984f71d3cea23c12988 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 7.0E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_02890 07ad9737fc19e984f71d3cea23c12988 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 7.0E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_02890 07ad9737fc19e984f71d3cea23c12988 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 7.0E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_02890 07ad9737fc19e984f71d3cea23c12988 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 7.0E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_02890 07ad9737fc19e984f71d3cea23c12988 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 7.0E-24 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_02890 07ad9737fc19e984f71d3cea23c12988 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 3.6E-14 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VSVS12_02890 07ad9737fc19e984f71d3cea23c12988 394 Gene3D G3DSA:2.40.30.10 206 334 6.6E-52 T 11-10-2018 VSVS12_02890 07ad9737fc19e984f71d3cea23c12988 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 59.424 T 11-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VSVS12_02890 07ad9737fc19e984f71d3cea23c12988 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 4.6E-58 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_03481 610e804105a1168c2c07fd99f8970454 673 SUPERFAMILY SSF55718 546 669 1.91E-27 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily VSVS12_03481 610e804105a1168c2c07fd99f8970454 673 ProSitePatterns PS00743 Beta-lactamases class B signature 1. 177 196 - T 11-10-2018 IPR001018 Beta-lactamase, class-B, conserved site GO:0008270|GO:0008800|GO:0017001 VSVS12_03481 610e804105a1168c2c07fd99f8970454 673 SMART SM00849 129 356 2.4E-16 T 11-10-2018 IPR001279 Metallo-beta-lactamase VSVS12_03481 610e804105a1168c2c07fd99f8970454 673 Gene3D G3DSA:3.60.15.30 31 396 2.4E-117 T 11-10-2018 VSVS12_03481 610e804105a1168c2c07fd99f8970454 673 SUPERFAMILY SSF56281 31 538 1.38E-104 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VSVS12_03481 610e804105a1168c2c07fd99f8970454 673 Pfam PF14863 Alkyl sulfatase dimerisation 398 537 2.6E-34 T 11-10-2018 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 VSVS12_03481 610e804105a1168c2c07fd99f8970454 673 Gene3D G3DSA:1.25.40.880 398 537 8.9E-34 T 11-10-2018 IPR038536 Alkyl/aryl-sulfatase, dimerisation domain superfamily VSVS12_03481 610e804105a1168c2c07fd99f8970454 673 Pfam PF00753 Metallo-beta-lactamase superfamily 125 343 2.3E-16 T 11-10-2018 IPR001279 Metallo-beta-lactamase VSVS12_03481 610e804105a1168c2c07fd99f8970454 673 Gene3D G3DSA:3.30.1050.10 539 671 1.6E-29 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily VSVS12_03481 610e804105a1168c2c07fd99f8970454 673 Pfam PF14864 Alkyl sulfatase C-terminal 545 668 1.4E-25 T 11-10-2018 IPR029229 Alkyl sulfatase, C-terminal VSVS12_00023 513b1a831553c99b62783572e8bf1aa8 109 Pfam PF10694 Protein of unknown function (DUF2500) 3 105 4.0E-24 T 11-10-2018 IPR019635 Protein of unknown function DUF2500 VSVS12_00023 513b1a831553c99b62783572e8bf1aa8 109 Gene3D G3DSA:2.40.50.660 32 109 6.0E-7 T 11-10-2018 VSVS12_02828 c985d7ec560e67697c32acc892e47f5a 382 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 13 380 4.6E-225 T 11-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 VSVS12_02828 c985d7ec560e67697c32acc892e47f5a 382 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 72 86 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 VSVS12_02828 c985d7ec560e67697c32acc892e47f5a 382 Gene3D G3DSA:3.90.180.10 17 375 3.5E-152 T 11-10-2018 VSVS12_02828 c985d7ec560e67697c32acc892e47f5a 382 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 39 165 4.4E-26 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VSVS12_02828 c985d7ec560e67697c32acc892e47f5a 382 SMART SM00829 23 378 0.0017 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VSVS12_02828 c985d7ec560e67697c32acc892e47f5a 382 Gene3D G3DSA:3.40.50.720 185 323 3.5E-152 T 11-10-2018 VSVS12_02828 c985d7ec560e67697c32acc892e47f5a 382 SUPERFAMILY SSF50129 10 196 1.22E-71 T 11-10-2018 IPR011032 GroES-like superfamily VSVS12_02828 c985d7ec560e67697c32acc892e47f5a 382 SUPERFAMILY SSF50129 329 379 5.65E-11 T 11-10-2018 IPR011032 GroES-like superfamily VSVS12_02828 c985d7ec560e67697c32acc892e47f5a 382 Pfam PF00107 Zinc-binding dehydrogenase 208 337 4.8E-26 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VSVS12_02828 c985d7ec560e67697c32acc892e47f5a 382 SUPERFAMILY SSF51735 171 345 9.03E-50 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_01189 961130c1c4df5de8215b40305bdb2187 204 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 13 203 44.58 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VSVS12_01189 961130c1c4df5de8215b40305bdb2187 204 SUPERFAMILY SSF52096 20 203 1.08E-75 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VSVS12_01189 961130c1c4df5de8215b40305bdb2187 204 PRINTS PR00127 Clp protease catalytic subunit P signature 178 197 3.7E-54 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VSVS12_01189 961130c1c4df5de8215b40305bdb2187 204 PRINTS PR00127 Clp protease catalytic subunit P signature 69 89 3.7E-54 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VSVS12_01189 961130c1c4df5de8215b40305bdb2187 204 PRINTS PR00127 Clp protease catalytic subunit P signature 100 117 3.7E-54 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VSVS12_01189 961130c1c4df5de8215b40305bdb2187 204 PRINTS PR00127 Clp protease catalytic subunit P signature 29 44 3.7E-54 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VSVS12_01189 961130c1c4df5de8215b40305bdb2187 204 PRINTS PR00127 Clp protease catalytic subunit P signature 121 140 3.7E-54 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VSVS12_01189 961130c1c4df5de8215b40305bdb2187 204 Pfam PF00574 Clp protease 22 202 3.9E-90 T 11-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA VSVS12_01189 961130c1c4df5de8215b40305bdb2187 204 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 122 135 - T 11-10-2018 IPR033135 ClpP, histidine active site VSVS12_01189 961130c1c4df5de8215b40305bdb2187 204 Gene3D G3DSA:3.90.226.10 2 204 3.2E-86 T 11-10-2018 VSVS12_01189 961130c1c4df5de8215b40305bdb2187 204 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 12 202 9.9E-108 T 11-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 VSVS12_03634 22a3421d60a753b36d63173bd3bd8533 559 Gene3D G3DSA:1.10.10.1100 418 490 1.7E-18 T 11-10-2018 VSVS12_03634 22a3421d60a753b36d63173bd3bd8533 559 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 9 21 8.6E-18 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VSVS12_03634 22a3421d60a753b36d63173bd3bd8533 559 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 22 32 8.6E-18 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VSVS12_03634 22a3421d60a753b36d63173bd3bd8533 559 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 311 317 8.6E-18 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VSVS12_03634 22a3421d60a753b36d63173bd3bd8533 559 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 347 359 8.6E-18 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VSVS12_03634 22a3421d60a753b36d63173bd3bd8533 559 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 38 50 8.6E-18 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VSVS12_03634 22a3421d60a753b36d63173bd3bd8533 559 Gene3D G3DSA:3.50.50.60 11 365 6.7E-74 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_03634 22a3421d60a753b36d63173bd3bd8533 559 Gene3D G3DSA:3.30.9.10 86 318 6.7E-74 T 11-10-2018 VSVS12_03634 22a3421d60a753b36d63173bd3bd8533 559 TIGRFAM TIGR03377 glycerol3P_GlpA: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit 11 538 7.9E-263 T 11-10-2018 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit GO:0004368|GO:0005886|GO:0010181|GO:0046174|GO:0050660|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 VSVS12_03634 22a3421d60a753b36d63173bd3bd8533 559 Pfam PF01266 FAD dependent oxidoreductase 11 358 2.2E-48 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VSVS12_03634 22a3421d60a753b36d63173bd3bd8533 559 Pfam PF04324 BFD-like [2Fe-2S] binding domain 431 483 7.5E-10 T 11-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain VSVS12_03634 22a3421d60a753b36d63173bd3bd8533 559 SUPERFAMILY SSF51905 10 319 1.3E-36 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_04004 8c7337db009f8b44ad315ef111652537 348 SUPERFAMILY SSF51726 7 344 4.06E-69 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VSVS12_04004 8c7337db009f8b44ad315ef111652537 348 Gene3D G3DSA:3.20.20.210 4 347 5.5E-135 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VSVS12_04004 8c7337db009f8b44ad315ef111652537 348 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 10 334 1.5E-36 T 11-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 VSVS12_04004 8c7337db009f8b44ad315ef111652537 348 PIRSF PIRSF005632 1 347 8.9E-197 T 11-10-2018 IPR016456 Predicted cobalamin-independent methionine synthase, catalytic subunit VSVS12_04311 0625bf59af8452dbd2f4baedd2bd5e9a 541 Gene3D G3DSA:3.20.20.140 85 519 1.9E-127 T 11-10-2018 VSVS12_04311 0625bf59af8452dbd2f4baedd2bd5e9a 541 Gene3D G3DSA:3.10.310.70 108 219 1.9E-127 T 11-10-2018 VSVS12_04311 0625bf59af8452dbd2f4baedd2bd5e9a 541 SUPERFAMILY SSF51338 24 540 8.93E-23 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VSVS12_04311 0625bf59af8452dbd2f4baedd2bd5e9a 541 SUPERFAMILY SSF51556 84 520 6.81E-19 T 11-10-2018 IPR032466 Metal-dependent hydrolase VSVS12_04311 0625bf59af8452dbd2f4baedd2bd5e9a 541 Pfam PF07969 Amidohydrolase family 73 540 2.5E-82 T 11-10-2018 IPR013108 Amidohydrolase 3 VSVS12_04311 0625bf59af8452dbd2f4baedd2bd5e9a 541 Gene3D G3DSA:2.30.40.10 32 537 1.9E-127 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VSVS12_00035 378b7e79f589b63cb83e2862b7814ef0 237 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 118 199 7.8E-9 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VSVS12_00035 378b7e79f589b63cb83e2862b7814ef0 237 SUPERFAMILY SSF56784 9 236 1.68E-37 T 11-10-2018 IPR036412 HAD-like superfamily VSVS12_00035 378b7e79f589b63cb83e2862b7814ef0 237 Pfam PF13419 Haloacid dehalogenase-like hydrolase 15 206 1.2E-12 T 11-10-2018 VSVS12_00035 378b7e79f589b63cb83e2862b7814ef0 237 Gene3D G3DSA:1.20.120.1600 24 110 6.4E-58 T 11-10-2018 VSVS12_00035 378b7e79f589b63cb83e2862b7814ef0 237 Gene3D G3DSA:3.40.50.1000 12 231 6.4E-58 T 11-10-2018 IPR023214 HAD superfamily VSVS12_00918 90ae0ad55e0ebeb515dc06167f50ffdf 337 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 331 3.0E-33 T 11-10-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VSVS12_00918 90ae0ad55e0ebeb515dc06167f50ffdf 337 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 331 7.4E-109 T 11-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 VSVS12_00918 90ae0ad55e0ebeb515dc06167f50ffdf 337 Gene3D G3DSA:1.20.272.10 213 336 5.5E-41 T 11-10-2018 VSVS12_00918 90ae0ad55e0ebeb515dc06167f50ffdf 337 SUPERFAMILY SSF48019 211 332 2.64E-33 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 VSVS12_00918 90ae0ad55e0ebeb515dc06167f50ffdf 337 SUPERFAMILY SSF52540 1 208 4.63E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00918 90ae0ad55e0ebeb515dc06167f50ffdf 337 Gene3D G3DSA:1.10.8.60 143 212 9.7E-21 T 11-10-2018 VSVS12_00918 90ae0ad55e0ebeb515dc06167f50ffdf 337 Pfam PF06144 DNA polymerase III, delta subunit 20 188 3.5E-49 T 11-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 VSVS12_00918 90ae0ad55e0ebeb515dc06167f50ffdf 337 Gene3D G3DSA:3.40.50.300 1 139 2.0E-49 T 11-10-2018 VSVS12_03591 c7ac39c5a1ed0991eb9e685d2b53339c 160 Gene3D G3DSA:3.40.50.1010 1 157 6.1E-54 T 11-10-2018 VSVS12_03591 c7ac39c5a1ed0991eb9e685d2b53339c 160 Pfam PF01936 NYN domain 3 150 5.1E-37 T 11-10-2018 IPR021139 NYN domain, limkain-b1-type VSVS12_00981 e5a33e0a8a5ca9b9a409658827a65c8f 307 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 168 304 2.4E-21 T 11-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 VSVS12_00981 e5a33e0a8a5ca9b9a409658827a65c8f 307 PRINTS PR01002 Flagellar protein FlgJ signature 181 199 9.1E-30 T 11-10-2018 VSVS12_00981 e5a33e0a8a5ca9b9a409658827a65c8f 307 PRINTS PR01002 Flagellar protein FlgJ signature 222 243 9.1E-30 T 11-10-2018 VSVS12_00981 e5a33e0a8a5ca9b9a409658827a65c8f 307 PRINTS PR01002 Flagellar protein FlgJ signature 287 305 9.1E-30 T 11-10-2018 VSVS12_00981 e5a33e0a8a5ca9b9a409658827a65c8f 307 PRINTS PR01002 Flagellar protein FlgJ signature 79 101 9.1E-30 T 11-10-2018 VSVS12_00981 e5a33e0a8a5ca9b9a409658827a65c8f 307 PRINTS PR01002 Flagellar protein FlgJ signature 31 54 9.1E-30 T 11-10-2018 VSVS12_00981 e5a33e0a8a5ca9b9a409658827a65c8f 307 PRINTS PR01002 Flagellar protein FlgJ signature 157 180 9.1E-30 T 11-10-2018 VSVS12_00981 e5a33e0a8a5ca9b9a409658827a65c8f 307 PRINTS PR01002 Flagellar protein FlgJ signature 244 265 9.1E-30 T 11-10-2018 VSVS12_00981 e5a33e0a8a5ca9b9a409658827a65c8f 307 Gene3D G3DSA:1.10.530.10 162 300 3.7E-45 T 11-10-2018 VSVS12_00981 e5a33e0a8a5ca9b9a409658827a65c8f 307 SUPERFAMILY SSF53955 111 199 9.0E-6 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily VSVS12_00981 e5a33e0a8a5ca9b9a409658827a65c8f 307 SMART SM00047 148 305 4.7E-54 T 11-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 VSVS12_00981 e5a33e0a8a5ca9b9a409658827a65c8f 307 Gene3D G3DSA:2.10.70.40 196 247 3.7E-45 T 11-10-2018 VSVS12_00981 e5a33e0a8a5ca9b9a409658827a65c8f 307 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 10 304 4.0E-104 T 11-10-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 VSVS12_00981 e5a33e0a8a5ca9b9a409658827a65c8f 307 Pfam PF10135 Rod binding protein 53 102 1.4E-14 T 11-10-2018 IPR019301 Flagellar protein FlgJ, N-terminal VSVS12_00924 cbdc66da3686ff56cf8a005b04324d85 154 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 39 143 2.8E-37 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 VSVS12_00924 cbdc66da3686ff56cf8a005b04324d85 154 Gene3D G3DSA:3.40.390.30 1 154 1.2E-57 T 11-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 VSVS12_00924 cbdc66da3686ff56cf8a005b04324d85 154 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 113 123 - T 11-10-2018 IPR020549 Endoribonuclease YbeY, conserved site VSVS12_00924 cbdc66da3686ff56cf8a005b04324d85 154 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 147 24.009 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 VSVS12_00924 cbdc66da3686ff56cf8a005b04324d85 154 SUPERFAMILY SSF55486 5 150 3.17E-49 T 11-10-2018 VSVS12_00924 cbdc66da3686ff56cf8a005b04324d85 154 Pfam PF02130 Uncharacterized protein family UPF0054 24 142 1.2E-37 T 11-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 VSVS12_01833 711888fe9bcb23474d34b43d6e762270 384 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 8 373 3.8E-187 T 11-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VSVS12_01833 711888fe9bcb23474d34b43d6e762270 384 Pfam PF06965 Na+/H+ antiporter 1 7 373 1.9E-144 T 11-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VSVS12_01833 711888fe9bcb23474d34b43d6e762270 384 Gene3D G3DSA:1.20.1530.10 3 381 2.1E-148 T 11-10-2018 IPR023171 Na/H antiporter domain superfamily VSVS12_01833 711888fe9bcb23474d34b43d6e762270 384 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 5 379 23.561 T 11-10-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 VSVS12_00568 7e81d0721c4e4add4dcc3b75fb07e084 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 23 238 30.632 T 11-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 VSVS12_00568 7e81d0721c4e4add4dcc3b75fb07e084 239 Pfam PF02390 Putative methyltransferase 62 232 2.9E-59 T 11-10-2018 VSVS12_00568 7e81d0721c4e4add4dcc3b75fb07e084 239 SUPERFAMILY SSF53335 15 236 1.98E-37 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_00568 7e81d0721c4e4add4dcc3b75fb07e084 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 47 238 1.2E-68 T 11-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 VSVS12_00568 7e81d0721c4e4add4dcc3b75fb07e084 239 Gene3D G3DSA:3.40.50.150 29 239 6.3E-72 T 11-10-2018 VSVS12_02276 50bd73280711f2f75d3e826c0a298c4a 1672 Gene3D G3DSA:1.20.58.2200 1611 1669 2.5E-14 T 11-10-2018 IPR038440 FimV, C-terminal domain superfamily VSVS12_02276 50bd73280711f2f75d3e826c0a298c4a 1672 TIGRFAM TIGR03504 FimV_Cterm: FimV C-terminal domain 1627 1668 7.9E-15 T 11-10-2018 IPR020011 Motility protein FimV, C-terminal VSVS12_02276 50bd73280711f2f75d3e826c0a298c4a 1672 TIGRFAM TIGR03505 FimV_core: FimV N-terminal domain 68 139 7.8E-26 T 11-10-2018 IPR020012 Motility protein FimV, N-terminal VSVS12_04589 83d168f6715a9cb7b86d803006826daa 122 Pfam PF01051 Initiator Replication protein 18 118 1.8E-8 T 11-10-2018 IPR000525 Initiator Rep protein GO:0003887|GO:0005727|GO:0006270 VSVS12_04589 83d168f6715a9cb7b86d803006826daa 122 Gene3D G3DSA:1.10.10.10 10 120 2.5E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_04589 83d168f6715a9cb7b86d803006826daa 122 SUPERFAMILY SSF46785 22 114 7.53E-11 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_02869 d298e420eed3d9666aa15c396592617a 183 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 24 182 5.0E-75 T 11-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ VSVS12_02869 d298e420eed3d9666aa15c396592617a 183 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 183 1.6E-85 T 11-10-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ VSVS12_02869 d298e420eed3d9666aa15c396592617a 183 Gene3D G3DSA:3.40.30.10 19 181 1.0E-5 T 11-10-2018 VSVS12_01190 27bbbacd4a4522a4f6183e28b3ece569 426 Pfam PF06689 ClpX C4-type zinc finger 13 50 1.1E-19 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 VSVS12_01190 27bbbacd4a4522a4f6183e28b3ece569 426 SMART SM00382 112 265 2.0E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_01190 27bbbacd4a4522a4f6183e28b3ece569 426 SMART SM00994 12 51 2.3E-23 T 11-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 VSVS12_01190 27bbbacd4a4522a4f6183e28b3ece569 426 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 5 416 53.361 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 VSVS12_01190 27bbbacd4a4522a4f6183e28b3ece569 426 SUPERFAMILY SSF57716 13 48 1.71E-11 T 11-10-2018 VSVS12_01190 27bbbacd4a4522a4f6183e28b3ece569 426 Gene3D G3DSA:3.40.50.300 58 316 1.8E-108 T 11-10-2018 VSVS12_01190 27bbbacd4a4522a4f6183e28b3ece569 426 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 318 395 9.2E-16 T 11-10-2018 IPR019489 Clp ATPase, C-terminal VSVS12_01190 27bbbacd4a4522a4f6183e28b3ece569 426 Pfam PF07724 AAA domain (Cdc48 subfamily) 113 311 1.3E-48 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VSVS12_01190 27bbbacd4a4522a4f6183e28b3ece569 426 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 7 413 1.6E-209 T 11-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 VSVS12_01190 27bbbacd4a4522a4f6183e28b3ece569 426 Gene3D G3DSA:1.10.8.60 317 425 2.7E-41 T 11-10-2018 VSVS12_01190 27bbbacd4a4522a4f6183e28b3ece569 426 SMART SM01086 318 413 7.7E-34 T 11-10-2018 IPR019489 Clp ATPase, C-terminal VSVS12_01190 27bbbacd4a4522a4f6183e28b3ece569 426 SUPERFAMILY SSF52540 62 403 3.64E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01190 27bbbacd4a4522a4f6183e28b3ece569 426 Gene3D G3DSA:3.30.50.30 2 52 1.7E-25 T 11-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily VSVS12_01312 668bde13058595d82f662921b7f541f0 542 Gene3D G3DSA:3.10.105.10 297 512 5.8E-192 T 11-10-2018 VSVS12_01312 668bde13058595d82f662921b7f541f0 542 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 88 109 - T 11-10-2018 IPR023765 Solute-binding protein family 5, conserved site VSVS12_01312 668bde13058595d82f662921b7f541f0 542 Gene3D G3DSA:3.40.190.10 42 524 5.8E-192 T 11-10-2018 VSVS12_01312 668bde13058595d82f662921b7f541f0 542 SUPERFAMILY SSF53850 40 531 1.23E-146 T 11-10-2018 VSVS12_01312 668bde13058595d82f662921b7f541f0 542 Gene3D G3DSA:3.90.76.10 72 195 5.8E-192 T 11-10-2018 VSVS12_01312 668bde13058595d82f662921b7f541f0 542 PIRSF PIRSF002741 1 542 2.7E-112 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VSVS12_01312 668bde13058595d82f662921b7f541f0 542 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 461 2.6E-92 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain VSVS12_00367 53c0d128b96b2c0fce57908bda184dfb 803 SUPERFAMILY SSF53633 5 291 4.19E-59 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VSVS12_00367 53c0d128b96b2c0fce57908bda184dfb 803 PIRSF PIRSF000727 5 803 1.9E-286 T 11-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VSVS12_00367 53c0d128b96b2c0fce57908bda184dfb 803 Gene3D G3DSA:3.30.2130.10 335 451 3.4E-6 T 11-10-2018 VSVS12_00367 53c0d128b96b2c0fce57908bda184dfb 803 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 457 593 2.5E-14 T 11-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 VSVS12_00367 53c0d128b96b2c0fce57908bda184dfb 803 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 8 445 1.1E-63 T 11-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VSVS12_00367 53c0d128b96b2c0fce57908bda184dfb 803 SUPERFAMILY SSF55347 601 784 1.24E-44 T 11-10-2018 VSVS12_00367 53c0d128b96b2c0fce57908bda184dfb 803 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 11-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VSVS12_00367 53c0d128b96b2c0fce57908bda184dfb 803 Pfam PF00742 Homoserine dehydrogenase 601 796 2.1E-42 T 11-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 VSVS12_00367 53c0d128b96b2c0fce57908bda184dfb 803 Pfam PF00696 Amino acid kinase family 5 277 2.5E-44 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VSVS12_00367 53c0d128b96b2c0fce57908bda184dfb 803 SUPERFAMILY SSF51735 448 623 1.74E-35 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_00367 53c0d128b96b2c0fce57908bda184dfb 803 Gene3D G3DSA:3.30.360.10 612 782 3.0E-103 T 11-10-2018 VSVS12_00367 53c0d128b96b2c0fce57908bda184dfb 803 Gene3D G3DSA:3.40.50.720 452 797 3.0E-103 T 11-10-2018 VSVS12_00367 53c0d128b96b2c0fce57908bda184dfb 803 Gene3D G3DSA:3.40.1160.10 8 290 1.9E-74 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VSVS12_00367 53c0d128b96b2c0fce57908bda184dfb 803 Gene3D G3DSA:1.20.120.1320 44 137 1.9E-74 T 11-10-2018 VSVS12_00367 53c0d128b96b2c0fce57908bda184dfb 803 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 647 669 - T 11-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 VSVS12_00969 155c4e7d51ca2ac361b9bb91234cd675 105 SUPERFAMILY SSF101498 4 100 1.02E-19 T 11-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily VSVS12_00969 155c4e7d51ca2ac361b9bb91234cd675 105 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 10 101 6.8E-25 T 11-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 VSVS12_00969 155c4e7d51ca2ac361b9bb91234cd675 105 Pfam PF04316 Anti-sigma-28 factor, FlgM 44 97 2.3E-18 T 11-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal VSVS12_01487 43d419c70aea2ed19e8e2e290bf7259b 443 SUPERFAMILY SSF53098 92 418 2.35E-27 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_01487 43d419c70aea2ed19e8e2e290bf7259b 443 Pfam PF01609 Transposase DDE domain 129 352 1.5E-21 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_01487 43d419c70aea2ed19e8e2e290bf7259b 443 Pfam PF13006 Insertion element 4 transposase N-terminal 19 109 5.0E-27 T 11-10-2018 IPR024473 Transposase, IS4, N-terminal VSVS12_02340 43d419c70aea2ed19e8e2e290bf7259b 443 SUPERFAMILY SSF53098 92 418 2.35E-27 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_02340 43d419c70aea2ed19e8e2e290bf7259b 443 Pfam PF01609 Transposase DDE domain 129 352 1.5E-21 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_02340 43d419c70aea2ed19e8e2e290bf7259b 443 Pfam PF13006 Insertion element 4 transposase N-terminal 19 109 5.0E-27 T 11-10-2018 IPR024473 Transposase, IS4, N-terminal VSVS12_01477 6f3a32505645af1c2b0c052ae41b2c37 244 SUPERFAMILY SSF51735 4 243 1.11E-82 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_01477 6f3a32505645af1c2b0c052ae41b2c37 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 7.0E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01477 6f3a32505645af1c2b0c052ae41b2c37 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 7.0E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01477 6f3a32505645af1c2b0c052ae41b2c37 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 150 169 7.0E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01477 6f3a32505645af1c2b0c052ae41b2c37 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 7.1E-46 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01477 6f3a32505645af1c2b0c052ae41b2c37 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 150 169 7.1E-46 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01477 6f3a32505645af1c2b0c052ae41b2c37 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 7.1E-46 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01477 6f3a32505645af1c2b0c052ae41b2c37 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 7.1E-46 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01477 6f3a32505645af1c2b0c052ae41b2c37 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 7.1E-46 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01477 6f3a32505645af1c2b0c052ae41b2c37 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 7.1E-46 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01477 6f3a32505645af1c2b0c052ae41b2c37 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 187 7.9E-4 T 11-10-2018 VSVS12_01477 6f3a32505645af1c2b0c052ae41b2c37 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 137 165 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VSVS12_01477 6f3a32505645af1c2b0c052ae41b2c37 244 Gene3D G3DSA:3.40.50.720 1 244 1.6E-83 T 11-10-2018 VSVS12_01477 6f3a32505645af1c2b0c052ae41b2c37 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 242 8.6E-65 T 11-10-2018 VSVS12_02673 a4c895ce1fe4eefca13855a3ade62c76 515 Gene3D G3DSA:1.10.238.260 280 393 4.3E-32 T 11-10-2018 VSVS12_02673 a4c895ce1fe4eefca13855a3ade62c76 515 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 508 42.215 T 11-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VSVS12_02673 a4c895ce1fe4eefca13855a3ade62c76 515 Pfam PF00682 HMGL-like 4 273 2.2E-101 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 VSVS12_02673 a4c895ce1fe4eefca13855a3ade62c76 515 SUPERFAMILY SSF110921 393 498 7.85E-21 T 11-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VSVS12_02673 a4c895ce1fe4eefca13855a3ade62c76 515 Gene3D G3DSA:3.20.20.70 1 277 3.9E-107 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_02673 a4c895ce1fe4eefca13855a3ade62c76 515 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VSVS12_02673 a4c895ce1fe4eefca13855a3ade62c76 515 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 11-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VSVS12_02673 a4c895ce1fe4eefca13855a3ade62c76 515 SMART SM00917 369 499 7.8E-28 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VSVS12_02673 a4c895ce1fe4eefca13855a3ade62c76 515 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 496 5.0E-237 T 11-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VSVS12_02673 a4c895ce1fe4eefca13855a3ade62c76 515 SUPERFAMILY SSF51569 1 291 1.83E-100 T 11-10-2018 VSVS12_02673 a4c895ce1fe4eefca13855a3ade62c76 515 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 498 1.5E-29 T 11-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 VSVS12_02673 a4c895ce1fe4eefca13855a3ade62c76 515 Gene3D G3DSA:3.30.160.270 394 500 1.9E-7 T 11-10-2018 VSVS12_03476 a99d64dd7449e34112ca53d03a037216 458 SMART SM01091 356 450 2.5E-15 T 11-10-2018 IPR005170 Transporter-associated domain VSVS12_03476 a99d64dd7449e34112ca53d03a037216 458 Pfam PF03471 Transporter associated domain 358 449 3.0E-18 T 11-10-2018 IPR005170 Transporter-associated domain VSVS12_03476 a99d64dd7449e34112ca53d03a037216 458 Gene3D G3DSA:3.30.465.10 352 449 1.1E-20 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 VSVS12_03476 a99d64dd7449e34112ca53d03a037216 458 SUPERFAMILY SSF56176 355 451 6.54E-15 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VSVS12_03476 a99d64dd7449e34112ca53d03a037216 458 Pfam PF01595 Domain of unknown function DUF21 14 204 5.1E-34 T 11-10-2018 IPR002550 CNNM, transmembrane domain VSVS12_03476 a99d64dd7449e34112ca53d03a037216 458 Gene3D G3DSA:3.10.580.10 205 351 1.2E-38 T 11-10-2018 VSVS12_03476 a99d64dd7449e34112ca53d03a037216 458 Pfam PF00571 CBS domain 228 277 3.3E-9 T 11-10-2018 IPR000644 CBS domain VSVS12_03476 a99d64dd7449e34112ca53d03a037216 458 Pfam PF00571 CBS domain 286 340 9.2E-4 T 11-10-2018 IPR000644 CBS domain VSVS12_03476 a99d64dd7449e34112ca53d03a037216 458 SUPERFAMILY SSF54631 217 353 4.3E-26 T 11-10-2018 VSVS12_02120 3ffe7799ff033f5f4dbe71a487a487bc 133 Gene3D G3DSA:3.30.420.270 61 129 3.1E-10 T 11-10-2018 VSVS12_02120 3ffe7799ff033f5f4dbe71a487a487bc 133 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 132 9.4E-28 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 VSVS12_02656 37c4385fe77ef8e36c7a4513db7f7cce 538 SUPERFAMILY SSF51905 5 447 3.89E-76 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_02656 37c4385fe77ef8e36c7a4513db7f7cce 538 SUPERFAMILY SSF46977 425 526 1.83E-32 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VSVS12_02656 37c4385fe77ef8e36c7a4513db7f7cce 538 Gene3D G3DSA:3.50.50.60 10 404 1.1E-152 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_02656 37c4385fe77ef8e36c7a4513db7f7cce 538 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 7 520 4.1E-210 T 11-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 VSVS12_02656 37c4385fe77ef8e36c7a4513db7f7cce 538 Pfam PF00890 FAD binding domain 10 392 2.4E-102 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 VSVS12_02656 37c4385fe77ef8e36c7a4513db7f7cce 538 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 1.4E-9 T 11-10-2018 VSVS12_02656 37c4385fe77ef8e36c7a4513db7f7cce 538 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 1.4E-9 T 11-10-2018 VSVS12_02656 37c4385fe77ef8e36c7a4513db7f7cce 538 Gene3D G3DSA:3.90.700.10 248 358 1.1E-152 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VSVS12_02656 37c4385fe77ef8e36c7a4513db7f7cce 538 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 370 377 2.7E-7 T 11-10-2018 VSVS12_02656 37c4385fe77ef8e36c7a4513db7f7cce 538 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 2.7E-7 T 11-10-2018 VSVS12_02656 37c4385fe77ef8e36c7a4513db7f7cce 538 Gene3D G3DSA:1.20.58.100 425 537 1.5E-44 T 11-10-2018 VSVS12_02656 37c4385fe77ef8e36c7a4513db7f7cce 538 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 521 2.1E-14 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VSVS12_02656 37c4385fe77ef8e36c7a4513db7f7cce 538 PIRSF PIRSF000171 1 250 5.8E-24 T 11-10-2018 VSVS12_02656 37c4385fe77ef8e36c7a4513db7f7cce 538 PIRSF PIRSF000171 331 535 4.6E-12 T 11-10-2018 VSVS12_02656 37c4385fe77ef8e36c7a4513db7f7cce 538 SUPERFAMILY SSF56425 238 353 5.38E-41 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VSVS12_00579 72c0439e81f96d57cd5b0a75c33f5f52 450 SUPERFAMILY SSF55021 377 449 6.54E-15 T 11-10-2018 VSVS12_00579 72c0439e81f96d57cd5b0a75c33f5f52 450 Gene3D G3DSA:3.30.70.260 310 383 5.0E-46 T 11-10-2018 VSVS12_00579 72c0439e81f96d57cd5b0a75c33f5f52 450 Gene3D G3DSA:1.20.120.1320 42 135 5.6E-101 T 11-10-2018 VSVS12_00579 72c0439e81f96d57cd5b0a75c33f5f52 450 PIRSF PIRSF000726 2 450 5.4E-130 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VSVS12_00579 72c0439e81f96d57cd5b0a75c33f5f52 450 Pfam PF00696 Amino acid kinase family 6 278 2.3E-50 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VSVS12_00579 72c0439e81f96d57cd5b0a75c33f5f52 450 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 6 449 1.5E-123 T 11-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VSVS12_00579 72c0439e81f96d57cd5b0a75c33f5f52 450 Gene3D G3DSA:3.40.1160.10 6 290 5.6E-101 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VSVS12_00579 72c0439e81f96d57cd5b0a75c33f5f52 450 Gene3D G3DSA:3.30.70.260 304 447 5.0E-46 T 11-10-2018 VSVS12_00579 72c0439e81f96d57cd5b0a75c33f5f52 450 ProSitePatterns PS00324 Aspartokinase signature. 6 14 - T 11-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VSVS12_00579 72c0439e81f96d57cd5b0a75c33f5f52 450 SUPERFAMILY SSF55021 297 394 5.83E-19 T 11-10-2018 VSVS12_00579 72c0439e81f96d57cd5b0a75c33f5f52 450 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 6 449 2.2E-123 T 11-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VSVS12_00579 72c0439e81f96d57cd5b0a75c33f5f52 450 SUPERFAMILY SSF53633 6 293 1.44E-78 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VSVS12_03712 4159653cb11ef2765ddd8a17d707e98c 282 SUPERFAMILY SSF52540 35 262 3.07E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03712 4159653cb11ef2765ddd8a17d707e98c 282 Pfam PF00005 ABC transporter 51 190 9.2E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_03712 4159653cb11ef2765ddd8a17d707e98c 282 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_03712 4159653cb11ef2765ddd8a17d707e98c 282 SMART SM00382 49 238 1.7E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_03712 4159653cb11ef2765ddd8a17d707e98c 282 Gene3D G3DSA:3.40.50.300 16 281 8.5E-75 T 11-10-2018 VSVS12_01188 abf9bbd3780693efc421cc47e65dd31b 433 Gene3D G3DSA:3.30.70.1050 1 115 1.8E-40 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 VSVS12_01188 abf9bbd3780693efc421cc47e65dd31b 433 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 263 412 5.8E-40 T 11-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 VSVS12_01188 abf9bbd3780693efc421cc47e65dd31b 433 PIRSF PIRSF003095 1 433 4.7E-125 T 11-10-2018 IPR005215 Trigger factor GO:0015031 VSVS12_01188 abf9bbd3780693efc421cc47e65dd31b 433 SUPERFAMILY SSF109998 248 429 9.81E-49 T 11-10-2018 IPR027304 Trigger factor/SurA domain superfamily VSVS12_01188 abf9bbd3780693efc421cc47e65dd31b 433 Pfam PF05697 Bacterial trigger factor protein (TF) 1 143 3.9E-41 T 11-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 VSVS12_01188 abf9bbd3780693efc421cc47e65dd31b 433 SUPERFAMILY SSF102735 1 130 3.53E-40 T 11-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 VSVS12_01188 abf9bbd3780693efc421cc47e65dd31b 433 TIGRFAM TIGR00115 tig: trigger factor 11 412 2.4E-140 T 11-10-2018 IPR005215 Trigger factor GO:0015031 VSVS12_01188 abf9bbd3780693efc421cc47e65dd31b 433 Hamap MF_00303 Trigger factor [tig]. 1 418 21.58 T 11-10-2018 IPR005215 Trigger factor GO:0015031 VSVS12_01188 abf9bbd3780693efc421cc47e65dd31b 433 Gene3D G3DSA:3.10.50.40 150 246 1.7E-104 T 11-10-2018 VSVS12_01188 abf9bbd3780693efc421cc47e65dd31b 433 SUPERFAMILY SSF54534 90 241 2.95E-35 T 11-10-2018 VSVS12_01188 abf9bbd3780693efc421cc47e65dd31b 433 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 156 233 8.7E-13 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VSVS12_01188 abf9bbd3780693efc421cc47e65dd31b 433 Gene3D G3DSA:1.10.3120.10 116 417 1.7E-104 T 11-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 VSVS12_02892 4a318c9ab0188d10b6edb63cd2f40479 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 11-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_02892 4a318c9ab0188d10b6edb63cd2f40479 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.778 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 VSVS12_02892 4a318c9ab0188d10b6edb63cd2f40479 156 SUPERFAMILY SSF47973 6 149 3.27E-59 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily VSVS12_02892 4a318c9ab0188d10b6edb63cd2f40479 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 3.7E-65 T 11-10-2018 IPR023798 Ribosomal protein S7 domain VSVS12_02892 4a318c9ab0188d10b6edb63cd2f40479 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 6.9E-71 T 11-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 VSVS12_02892 4a318c9ab0188d10b6edb63cd2f40479 156 PIRSF PIRSF002122 3 156 9.6E-63 T 11-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 VSVS12_02892 4a318c9ab0188d10b6edb63cd2f40479 156 Gene3D G3DSA:1.10.455.10 2 155 9.3E-64 T 11-10-2018 IPR036823 Ribosomal protein S7 domain superfamily VSVS12_03479 de20783abf611df9e988af43ace919eb 265 Gene3D G3DSA:1.10.10.60 154 258 1.6E-21 T 11-10-2018 VSVS12_03479 de20783abf611df9e988af43ace919eb 265 SUPERFAMILY SSF46689 154 205 8.6E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_03479 de20783abf611df9e988af43ace919eb 265 SMART SM00342 171 253 3.0E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VSVS12_03479 de20783abf611df9e988af43ace919eb 265 Pfam PF12833 Helix-turn-helix domain 178 254 3.5E-19 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VSVS12_03479 de20783abf611df9e988af43ace919eb 265 SUPERFAMILY SSF51182 29 80 2.0E-5 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily VSVS12_03479 de20783abf611df9e988af43ace919eb 265 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 208 249 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VSVS12_03479 de20783abf611df9e988af43ace919eb 265 SUPERFAMILY SSF46689 207 256 1.97E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_02212 d98fe3e813515da3f3cd4969dcf526b0 275 Pfam PF13847 Methyltransferase domain 84 219 3.2E-15 T 11-10-2018 IPR025714 Methyltransferase domain VSVS12_02212 d98fe3e813515da3f3cd4969dcf526b0 275 SUPERFAMILY SSF53335 4 256 3.44E-47 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_02212 d98fe3e813515da3f3cd4969dcf526b0 275 Gene3D G3DSA:3.40.50.150 1 273 5.6E-80 T 11-10-2018 VSVS12_02212 d98fe3e813515da3f3cd4969dcf526b0 275 PIRSF PIRSF018249 1 272 8.9E-85 T 11-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 VSVS12_03657 24737180e10ccad6144a49eef3674b83 199 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 39 57 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VSVS12_03657 24737180e10ccad6144a49eef3674b83 199 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 66 84 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VSVS12_03657 24737180e10ccad6144a49eef3674b83 199 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 57 75 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VSVS12_03657 24737180e10ccad6144a49eef3674b83 199 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 25 41 0.17 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03657 24737180e10ccad6144a49eef3674b83 199 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 42 59 0.0016 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03657 24737180e10ccad6144a49eef3674b83 199 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 61 77 0.0043 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03657 24737180e10ccad6144a49eef3674b83 199 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 78 95 0.38 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_03657 24737180e10ccad6144a49eef3674b83 199 PRINTS PR00313 NodO calcium binding signature 61 69 1.4E-10 T 11-10-2018 VSVS12_03657 24737180e10ccad6144a49eef3674b83 199 PRINTS PR00313 NodO calcium binding signature 40 51 1.4E-10 T 11-10-2018 VSVS12_03657 24737180e10ccad6144a49eef3674b83 199 PRINTS PR00313 NodO calcium binding signature 70 78 1.4E-10 T 11-10-2018 VSVS12_03657 24737180e10ccad6144a49eef3674b83 199 PRINTS PR00313 NodO calcium binding signature 79 88 1.4E-10 T 11-10-2018 VSVS12_03657 24737180e10ccad6144a49eef3674b83 199 Gene3D G3DSA:2.150.10.10 3 63 6.7E-11 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_03657 24737180e10ccad6144a49eef3674b83 199 Pfam PF08548 Peptidase M10 serralysin C terminal 96 186 1.4E-6 T 11-10-2018 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 VSVS12_03657 24737180e10ccad6144a49eef3674b83 199 Gene3D G3DSA:2.150.10.10 64 186 1.0E-18 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_03657 24737180e10ccad6144a49eef3674b83 199 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 110 193 6.6E-11 T 11-10-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass VSVS12_03657 24737180e10ccad6144a49eef3674b83 199 SUPERFAMILY SSF51120 8 163 1.31E-29 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_03657 24737180e10ccad6144a49eef3674b83 199 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 48 66 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VSVS12_03635 617fcffec15ec4e46a1aa069c8a48c97 432 Gene3D G3DSA:1.20.1250.20 218 428 3.0E-19 T 11-10-2018 VSVS12_03635 617fcffec15ec4e46a1aa069c8a48c97 432 Pfam PF07690 Major Facilitator Superfamily 21 371 1.8E-22 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VSVS12_03635 617fcffec15ec4e46a1aa069c8a48c97 432 SUPERFAMILY SSF103473 16 425 6.41E-37 T 11-10-2018 IPR036259 MFS transporter superfamily VSVS12_03635 617fcffec15ec4e46a1aa069c8a48c97 432 Gene3D G3DSA:1.20.1250.20 12 208 3.7E-12 T 11-10-2018 VSVS12_02070 e0804b9b2f1c874f55251ee4d8f7b587 205 Pfam PF04356 Protein of unknown function (DUF489) 7 195 1.8E-75 T 11-10-2018 IPR007451 High frequency lysogenization protein HflD VSVS12_02070 e0804b9b2f1c874f55251ee4d8f7b587 205 SUPERFAMILY SSF101322 2 204 1.57E-78 T 11-10-2018 IPR035932 HflD-like superfamily VSVS12_02070 e0804b9b2f1c874f55251ee4d8f7b587 205 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 194 2.0E-93 T 11-10-2018 VSVS12_02070 e0804b9b2f1c874f55251ee4d8f7b587 205 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 203 35.495 T 11-10-2018 IPR007451 High frequency lysogenization protein HflD VSVS12_02070 e0804b9b2f1c874f55251ee4d8f7b587 205 Gene3D G3DSA:1.10.3890.10 1 205 1.4E-76 T 11-10-2018 IPR035932 HflD-like superfamily VSVS12_01058 cfeeafb318b263ada311ffc78e7df4d6 437 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 6 437 3.6E-181 T 11-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VSVS12_01058 cfeeafb318b263ada311ffc78e7df4d6 437 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 368 5.8E-152 T 11-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VSVS12_01058 cfeeafb318b263ada311ffc78e7df4d6 437 PIRSF PIRSF004539 1 437 1.1E-178 T 11-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VSVS12_04084 493ce3936fe039c38920f9fcc2a46b90 126 Gene3D G3DSA:2.170.150.70 5 125 6.9E-26 T 11-10-2018 VSVS12_04084 493ce3936fe039c38920f9fcc2a46b90 126 SUPERFAMILY SSF51316 1 86 7.74E-23 T 11-10-2018 IPR011057 Mss4-like superfamily VSVS12_04084 493ce3936fe039c38920f9fcc2a46b90 126 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 27 86 4.0E-6 T 11-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 VSVS12_03895 f17727ec82129784873545c43b975a25 94 SUPERFAMILY SSF50249 1 86 1.18E-23 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_03895 f17727ec82129784873545c43b975a25 94 ProDom PD015272 DNA DNA-BINDING SINGLE-STRANDED PHAGE-RELATED HELIX-DESTABILIZING REPLICATION BINDING GPV 3D-STRUCTURE DIRECT 1 85 1.0E-27 T 11-10-2018 IPR003512 Bacteriophage M13, G5P, DNA-binding GO:0003697|GO:0006260 VSVS12_03895 f17727ec82129784873545c43b975a25 94 Gene3D G3DSA:2.40.50.140 1 88 3.6E-27 T 11-10-2018 VSVS12_03895 f17727ec82129784873545c43b975a25 94 Pfam PF02303 Helix-destabilising protein 2 84 1.2E-30 T 11-10-2018 IPR003512 Bacteriophage M13, G5P, DNA-binding GO:0003697|GO:0006260 VSVS12_03887 f17727ec82129784873545c43b975a25 94 SUPERFAMILY SSF50249 1 86 1.18E-23 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_03887 f17727ec82129784873545c43b975a25 94 ProDom PD015272 DNA DNA-BINDING SINGLE-STRANDED PHAGE-RELATED HELIX-DESTABILIZING REPLICATION BINDING GPV 3D-STRUCTURE DIRECT 1 85 1.0E-27 T 11-10-2018 IPR003512 Bacteriophage M13, G5P, DNA-binding GO:0003697|GO:0006260 VSVS12_03887 f17727ec82129784873545c43b975a25 94 Gene3D G3DSA:2.40.50.140 1 88 3.6E-27 T 11-10-2018 VSVS12_03887 f17727ec82129784873545c43b975a25 94 Pfam PF02303 Helix-destabilising protein 2 84 1.2E-30 T 11-10-2018 IPR003512 Bacteriophage M13, G5P, DNA-binding GO:0003697|GO:0006260 VSVS12_03630 b9c1e8da8730757a10b5ab7d76fea9e3 333 Gene3D G3DSA:3.40.50.300 3 198 5.5E-47 T 11-10-2018 VSVS12_03630 b9c1e8da8730757a10b5ab7d76fea9e3 333 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 176 2.1E-43 T 11-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain VSVS12_03630 b9c1e8da8730757a10b5ab7d76fea9e3 333 SUPERFAMILY SSF52540 6 169 4.08E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02187 7568937a938d432f398543f10cfed018 334 SMART SM00354 1 71 6.0E-38 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VSVS12_02187 7568937a938d432f398543f10cfed018 334 Gene3D G3DSA:1.10.260.40 3 59 5.6E-25 T 11-10-2018 VSVS12_02187 7568937a938d432f398543f10cfed018 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 11-10-2018 VSVS12_02187 7568937a938d432f398543f10cfed018 334 SUPERFAMILY SSF53822 60 331 1.79E-95 T 11-10-2018 IPR028082 Periplasmic binding protein-like I VSVS12_02187 7568937a938d432f398543f10cfed018 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.1E-20 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VSVS12_02187 7568937a938d432f398543f10cfed018 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.0E-6 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VSVS12_02187 7568937a938d432f398543f10cfed018 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.0E-6 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VSVS12_02187 7568937a938d432f398543f10cfed018 334 Gene3D G3DSA:3.40.50.2300 161 323 1.7E-92 T 11-10-2018 VSVS12_02187 7568937a938d432f398543f10cfed018 334 Pfam PF13377 Periplasmic binding protein-like domain 170 330 3.6E-44 T 11-10-2018 VSVS12_02187 7568937a938d432f398543f10cfed018 334 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 334 63.456 T 11-10-2018 IPR023588 Transcription regulator HTH, PurR GO:0006355 VSVS12_02187 7568937a938d432f398543f10cfed018 334 Gene3D G3DSA:3.40.50.2300 69 322 1.7E-92 T 11-10-2018 VSVS12_02187 7568937a938d432f398543f10cfed018 334 SUPERFAMILY SSF47413 1 59 8.84E-18 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VSVS12_03668 f05ad252dc8ead016538655ad0682008 400 SUPERFAMILY SSF53187 6 391 5.24E-76 T 11-10-2018 VSVS12_03668 f05ad252dc8ead016538655ad0682008 400 TIGRFAM TIGR01882 peptidase-T: peptidase T 6 394 6.0E-152 T 11-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 VSVS12_03668 f05ad252dc8ead016538655ad0682008 400 Gene3D G3DSA:3.40.630.10 5 391 4.0E-166 T 11-10-2018 VSVS12_03668 f05ad252dc8ead016538655ad0682008 400 Hamap MF_00550 Peptidase T [pepT]. 1 395 52.949 T 11-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 VSVS12_03668 f05ad252dc8ead016538655ad0682008 400 Pfam PF01546 Peptidase family M20/M25/M40 130 392 1.1E-12 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 VSVS12_03668 f05ad252dc8ead016538655ad0682008 400 SUPERFAMILY SSF55031 200 310 4.76E-38 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VSVS12_03668 f05ad252dc8ead016538655ad0682008 400 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 129 168 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VSVS12_03668 f05ad252dc8ead016538655ad0682008 400 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 64 73 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VSVS12_03668 f05ad252dc8ead016538655ad0682008 400 Pfam PF07687 Peptidase dimerisation domain 197 300 2.9E-9 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain VSVS12_03668 f05ad252dc8ead016538655ad0682008 400 Gene3D G3DSA:3.30.70.360 200 310 4.0E-166 T 11-10-2018 VSVS12_03668 f05ad252dc8ead016538655ad0682008 400 PIRSF PIRSF037215 3 398 7.3E-174 T 11-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 VSVS12_01340 bde1a9204a3aa36f1c3327fa7bc371db 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 59 6.2E-22 T 11-10-2018 VSVS12_01340 bde1a9204a3aa36f1c3327fa7bc371db 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 9.1E-23 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VSVS12_01340 bde1a9204a3aa36f1c3327fa7bc371db 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 9.1E-23 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VSVS12_01340 bde1a9204a3aa36f1c3327fa7bc371db 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 9.1E-23 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VSVS12_01340 bde1a9204a3aa36f1c3327fa7bc371db 164 SUPERFAMILY SSF54909 74 158 1.21E-21 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel VSVS12_01340 bde1a9204a3aa36f1c3327fa7bc371db 164 Gene3D G3DSA:3.30.70.920 64 159 2.8E-24 T 11-10-2018 VSVS12_01340 bde1a9204a3aa36f1c3327fa7bc371db 164 Gene3D G3DSA:1.10.10.10 1 63 2.6E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_01340 bde1a9204a3aa36f1c3327fa7bc371db 164 SUPERFAMILY SSF46785 12 70 2.14E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_01340 bde1a9204a3aa36f1c3327fa7bc371db 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 1.3E-23 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VSVS12_01340 bde1a9204a3aa36f1c3327fa7bc371db 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 11-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VSVS12_01340 bde1a9204a3aa36f1c3327fa7bc371db 164 SMART SM00344 12 121 7.3E-55 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VSVS12_01037 989fe78a38cddabbc940841d03401300 154 Pfam PF00578 AhpC/TSA family 6 133 9.7E-38 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VSVS12_01037 989fe78a38cddabbc940841d03401300 154 Gene3D G3DSA:3.40.30.10 1 154 2.8E-47 T 11-10-2018 VSVS12_01037 989fe78a38cddabbc940841d03401300 154 PIRSF PIRSF000239 1 146 1.2E-17 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VSVS12_01037 989fe78a38cddabbc940841d03401300 154 SUPERFAMILY SSF52833 3 153 3.39E-48 T 11-10-2018 IPR036249 Thioredoxin-like superfamily VSVS12_01827 15c86d9e868bb5351d8f9487fdfaae29 170 PIRSF PIRSF028103 1 169 4.3E-42 T 11-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 VSVS12_01827 15c86d9e868bb5351d8f9487fdfaae29 170 Pfam PF13740 ACT domain 4 66 3.5E-9 T 11-10-2018 VSVS12_01827 15c86d9e868bb5351d8f9487fdfaae29 170 SUPERFAMILY SSF55021 89 167 2.25E-11 T 11-10-2018 VSVS12_01827 15c86d9e868bb5351d8f9487fdfaae29 170 Gene3D G3DSA:3.30.70.260 83 170 4.6E-13 T 11-10-2018 VSVS12_03994 01f7f899d03e818e16dcc0321194c02b 154 Pfam PF07308 Protein of unknown function (DUF1456) 85 151 4.0E-24 T 11-10-2018 IPR009921 Domain of unknown function DUF1456 VSVS12_03994 01f7f899d03e818e16dcc0321194c02b 154 Pfam PF07308 Protein of unknown function (DUF1456) 3 70 1.8E-25 T 11-10-2018 IPR009921 Domain of unknown function DUF1456 VSVS12_00872 8b5a7846d41a65bbedd97db95df349b2 452 SUPERFAMILY SSF50156 92 186 2.63E-11 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 VSVS12_00872 8b5a7846d41a65bbedd97db95df349b2 452 Pfam PF02163 Peptidase family M50 11 440 7.9E-86 T 11-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 VSVS12_00872 8b5a7846d41a65bbedd97db95df349b2 452 SUPERFAMILY SSF50156 196 291 6.18E-16 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 VSVS12_00872 8b5a7846d41a65bbedd97db95df349b2 452 SMART SM00228 115 186 0.25 T 11-10-2018 IPR001478 PDZ domain GO:0005515 VSVS12_00872 8b5a7846d41a65bbedd97db95df349b2 452 SMART SM00228 212 281 9.8E-6 T 11-10-2018 IPR001478 PDZ domain GO:0005515 VSVS12_00872 8b5a7846d41a65bbedd97db95df349b2 452 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 228 277 3.2E-6 T 11-10-2018 IPR001478 PDZ domain GO:0005515 VSVS12_00872 8b5a7846d41a65bbedd97db95df349b2 452 Gene3D G3DSA:2.30.42.10 224 311 3.7E-18 T 11-10-2018 VSVS12_00872 8b5a7846d41a65bbedd97db95df349b2 452 Gene3D G3DSA:2.30.42.10 126 221 3.2E-31 T 11-10-2018 VSVS12_00872 8b5a7846d41a65bbedd97db95df349b2 452 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 4 452 1.7E-134 T 11-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 VSVS12_02502 4a837e90f07239dcd16aa91eb7c2b6cb 184 SUPERFAMILY SSF110857 3 125 2.22E-11 T 11-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily VSVS12_02502 4a837e90f07239dcd16aa91eb7c2b6cb 184 Gene3D G3DSA:3.10.490.10 1 111 1.5E-7 T 11-10-2018 VSVS12_02502 4a837e90f07239dcd16aa91eb7c2b6cb 184 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 5 109 1.4E-9 T 11-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like VSVS12_02822 f3945efdffc74cf9be0969a2880bc334 379 Gene3D G3DSA:1.20.120.50 4 139 1.0E-28 T 11-10-2018 IPR035938 Hemerythrin-like superfamily VSVS12_02822 f3945efdffc74cf9be0969a2880bc334 379 SUPERFAMILY SSF55073 211 371 1.1E-37 T 11-10-2018 IPR029787 Nucleotide cyclase VSVS12_02822 f3945efdffc74cf9be0969a2880bc334 379 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 11 133 1.3E-25 T 11-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 VSVS12_02822 f3945efdffc74cf9be0969a2880bc334 379 Pfam PF01814 Hemerythrin HHE cation binding domain 18 132 1.1E-8 T 11-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 VSVS12_02822 f3945efdffc74cf9be0969a2880bc334 379 Gene3D G3DSA:3.30.70.270 191 370 2.6E-47 T 11-10-2018 VSVS12_02822 f3945efdffc74cf9be0969a2880bc334 379 SMART SM00267 195 371 6.4E-49 T 11-10-2018 IPR000160 GGDEF domain VSVS12_02822 f3945efdffc74cf9be0969a2880bc334 379 Pfam PF00990 Diguanylate cyclase, GGDEF domain 206 367 1.4E-40 T 11-10-2018 IPR000160 GGDEF domain VSVS12_02822 f3945efdffc74cf9be0969a2880bc334 379 SUPERFAMILY SSF47188 6 133 6.54E-24 T 11-10-2018 IPR035938 Hemerythrin-like superfamily VSVS12_02822 f3945efdffc74cf9be0969a2880bc334 379 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 202 369 2.6E-41 T 11-10-2018 IPR000160 GGDEF domain VSVS12_02742 cde39b37f9fcaebc69c51520ca50de56 952 Gene3D G3DSA:3.30.830.10 274 470 1.3E-33 T 11-10-2018 VSVS12_02742 cde39b37f9fcaebc69c51520ca50de56 952 Pfam PF00675 Insulinase (Peptidase family M16) 539 655 2.8E-10 T 11-10-2018 IPR011765 Peptidase M16, N-terminal VSVS12_02742 cde39b37f9fcaebc69c51520ca50de56 952 Pfam PF00675 Insulinase (Peptidase family M16) 63 179 1.1E-17 T 11-10-2018 IPR011765 Peptidase M16, N-terminal VSVS12_02742 cde39b37f9fcaebc69c51520ca50de56 952 Pfam PF05193 Peptidase M16 inactive domain 687 857 5.8E-21 T 11-10-2018 IPR007863 Peptidase M16, C-terminal VSVS12_02742 cde39b37f9fcaebc69c51520ca50de56 952 Pfam PF05193 Peptidase M16 inactive domain 220 395 2.5E-30 T 11-10-2018 IPR007863 Peptidase M16, C-terminal VSVS12_02742 cde39b37f9fcaebc69c51520ca50de56 952 Gene3D G3DSA:3.30.830.10 743 935 1.7E-35 T 11-10-2018 VSVS12_02742 cde39b37f9fcaebc69c51520ca50de56 952 SUPERFAMILY SSF63411 51 259 2.0E-55 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VSVS12_02742 cde39b37f9fcaebc69c51520ca50de56 952 SUPERFAMILY SSF63411 281 469 1.43E-30 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VSVS12_02742 cde39b37f9fcaebc69c51520ca50de56 952 SUPERFAMILY SSF63411 520 722 1.91E-40 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VSVS12_02742 cde39b37f9fcaebc69c51520ca50de56 952 Gene3D G3DSA:3.30.830.10 47 272 2.4E-66 T 11-10-2018 VSVS12_02742 cde39b37f9fcaebc69c51520ca50de56 952 Gene3D G3DSA:3.30.830.10 526 727 1.1E-38 T 11-10-2018 VSVS12_02742 cde39b37f9fcaebc69c51520ca50de56 952 SUPERFAMILY SSF63411 740 942 4.5E-36 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VSVS12_03698 9a76a50a63245a5cce97fc80fecb84ab 112 Gene3D G3DSA:2.40.50.200 11 112 8.5E-33 T 11-10-2018 IPR036700 Bacterial OB-fold superfamily VSVS12_03698 9a76a50a63245a5cce97fc80fecb84ab 112 SUPERFAMILY SSF101756 8 111 1.05E-32 T 11-10-2018 IPR036700 Bacterial OB-fold superfamily VSVS12_03698 9a76a50a63245a5cce97fc80fecb84ab 112 Pfam PF04076 Bacterial OB fold (BOF) protein 18 110 2.1E-27 T 11-10-2018 IPR005220 Bacterial OB-fold VSVS12_01763 bb8c4c21f49221b660df2d7c08ffeb85 304 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 8 298 1.3E-128 T 11-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 VSVS12_01763 bb8c4c21f49221b660df2d7c08ffeb85 304 Pfam PF13580 SIS domain 44 166 3.0E-6 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VSVS12_01763 bb8c4c21f49221b660df2d7c08ffeb85 304 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 187 204 - T 11-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 VSVS12_01763 bb8c4c21f49221b660df2d7c08ffeb85 304 Gene3D G3DSA:3.40.50.10490 1 220 2.0E-81 T 11-10-2018 VSVS12_01763 bb8c4c21f49221b660df2d7c08ffeb85 304 SUPERFAMILY SSF53697 7 250 1.4E-69 T 11-10-2018 VSVS12_01763 bb8c4c21f49221b660df2d7c08ffeb85 304 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 4 297 42.711 T 11-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 VSVS12_01763 bb8c4c21f49221b660df2d7c08ffeb85 304 Gene3D G3DSA:1.10.8.1080 221 298 6.8E-30 T 11-10-2018 VSVS12_00862 5e399e6afce1c5a2ce9744793cb151a6 127 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 127 30.48 T 11-10-2018 IPR020911 Uncharacterised protein family UPF0325 VSVS12_00862 5e399e6afce1c5a2ce9744793cb151a6 127 Pfam PF11944 Protein of unknown function (DUF3461) 1 126 4.5E-54 T 11-10-2018 IPR020911 Uncharacterised protein family UPF0325 VSVS12_00862 5e399e6afce1c5a2ce9744793cb151a6 127 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 126 3.0E-60 T 11-10-2018 IPR020911 Uncharacterised protein family UPF0325 VSVS12_02867 aac3178b94ad73e0a8c412d548dc250c 571 Pfam PF01103 Surface antigen 275 567 9.0E-31 T 11-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 VSVS12_02867 aac3178b94ad73e0a8c412d548dc250c 571 Gene3D G3DSA:3.10.20.310 98 185 1.7E-29 T 11-10-2018 VSVS12_02867 aac3178b94ad73e0a8c412d548dc250c 571 Gene3D G3DSA:3.10.20.310 21 97 2.0E-23 T 11-10-2018 VSVS12_02867 aac3178b94ad73e0a8c412d548dc250c 571 Pfam PF07244 Surface antigen variable number repeat 106 164 2.3E-5 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 VSVS12_02867 aac3178b94ad73e0a8c412d548dc250c 571 Pfam PF17243 POTRA domain TamA domain 1 25 95 4.0E-20 T 11-10-2018 IPR035243 TamA, POTRA domain 1 VSVS12_02867 aac3178b94ad73e0a8c412d548dc250c 571 Gene3D G3DSA:2.40.160.50 263 571 3.6E-100 T 11-10-2018 VSVS12_02867 aac3178b94ad73e0a8c412d548dc250c 571 Gene3D G3DSA:3.10.20.310 186 262 1.6E-14 T 11-10-2018 VSVS12_02650 8e00a572d0f984dfe5da9f7e39730c46 298 ProSitePatterns PS00501 Signal peptidases I serine active site. 88 95 - T 11-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 VSVS12_02650 8e00a572d0f984dfe5da9f7e39730c46 298 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 65 271 2.2E-45 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VSVS12_02650 8e00a572d0f984dfe5da9f7e39730c46 298 Pfam PF10502 Signal peptidase, peptidase S26 227 268 1.2E-7 T 11-10-2018 IPR019533 Peptidase S26 VSVS12_02650 8e00a572d0f984dfe5da9f7e39730c46 298 Pfam PF00717 Peptidase S24-like 85 162 1.3E-19 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C VSVS12_02650 8e00a572d0f984dfe5da9f7e39730c46 298 ProSitePatterns PS00760 Signal peptidases I lysine active site. 145 157 - T 11-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 VSVS12_02650 8e00a572d0f984dfe5da9f7e39730c46 298 SUPERFAMILY SSF51306 77 296 1.31E-67 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily VSVS12_02650 8e00a572d0f984dfe5da9f7e39730c46 298 ProSitePatterns PS00761 Signal peptidases I signature 3. 236 249 - T 11-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 VSVS12_02650 8e00a572d0f984dfe5da9f7e39730c46 298 Gene3D G3DSA:2.170.230.10 154 230 5.7E-73 T 11-10-2018 VSVS12_02650 8e00a572d0f984dfe5da9f7e39730c46 298 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 231 250 2.7E-26 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VSVS12_02650 8e00a572d0f984dfe5da9f7e39730c46 298 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 79 95 2.7E-26 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VSVS12_02650 8e00a572d0f984dfe5da9f7e39730c46 298 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 143 155 2.7E-26 T 11-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 VSVS12_02650 8e00a572d0f984dfe5da9f7e39730c46 298 Gene3D G3DSA:2.10.109.10 77 271 5.7E-73 T 11-10-2018 VSVS12_03111 5d122f8e109b1bc93b2de61f5000e3fd 387 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 2.5E-5 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VSVS12_03111 5d122f8e109b1bc93b2de61f5000e3fd 387 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 2.5E-5 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VSVS12_03111 5d122f8e109b1bc93b2de61f5000e3fd 387 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 2.5E-5 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VSVS12_03111 5d122f8e109b1bc93b2de61f5000e3fd 387 Gene3D G3DSA:1.10.1660.10 1 110 6.5E-24 T 11-10-2018 VSVS12_03111 5d122f8e109b1bc93b2de61f5000e3fd 387 Pfam PF13411 MerR HTH family regulatory protein 2 69 2.5E-18 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VSVS12_03111 5d122f8e109b1bc93b2de61f5000e3fd 387 SUPERFAMILY SSF53335 139 383 2.61E-35 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_03111 5d122f8e109b1bc93b2de61f5000e3fd 387 SMART SM00422 2 70 1.8E-19 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VSVS12_03111 5d122f8e109b1bc93b2de61f5000e3fd 387 SUPERFAMILY SSF46955 2 102 1.03E-22 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily VSVS12_03111 5d122f8e109b1bc93b2de61f5000e3fd 387 Gene3D G3DSA:3.40.50.150 141 387 3.2E-53 T 11-10-2018 VSVS12_03111 5d122f8e109b1bc93b2de61f5000e3fd 387 Pfam PF13649 Methyltransferase domain 187 279 3.3E-17 T 11-10-2018 VSVS12_00628 131f827c564cffc81a4fd44482dd57d7 322 SUPERFAMILY SSF53850 25 321 7.6E-88 T 11-10-2018 VSVS12_00628 131f827c564cffc81a4fd44482dd57d7 322 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 8 319 1.3E-111 T 11-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family VSVS12_00628 131f827c564cffc81a4fd44482dd57d7 322 Gene3D G3DSA:3.40.190.10 117 255 2.2E-109 T 11-10-2018 VSVS12_00628 131f827c564cffc81a4fd44482dd57d7 322 Pfam PF16868 NMT1-like family 30 319 2.6E-97 T 11-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family VSVS12_00628 131f827c564cffc81a4fd44482dd57d7 322 Gene3D G3DSA:3.40.190.10 30 319 2.2E-109 T 11-10-2018 VSVS12_00263 26f86a0bda54fb63ea7ff2895fe56ebd 277 SUPERFAMILY SSF51735 106 273 4.32E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_00263 26f86a0bda54fb63ea7ff2895fe56ebd 277 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 119 195 2.5E-14 T 11-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase VSVS12_00263 26f86a0bda54fb63ea7ff2895fe56ebd 277 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 8 274 5.0E-88 T 11-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 VSVS12_00263 26f86a0bda54fb63ea7ff2895fe56ebd 277 SUPERFAMILY SSF53223 6 105 2.76E-31 T 11-10-2018 VSVS12_00263 26f86a0bda54fb63ea7ff2895fe56ebd 277 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 5 273 32.188 T 11-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 VSVS12_00263 26f86a0bda54fb63ea7ff2895fe56ebd 277 Gene3D G3DSA:3.40.50.10860 8 258 2.0E-82 T 11-10-2018 VSVS12_00263 26f86a0bda54fb63ea7ff2895fe56ebd 277 Gene3D G3DSA:3.40.50.720 119 239 2.0E-82 T 11-10-2018 VSVS12_00263 26f86a0bda54fb63ea7ff2895fe56ebd 277 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 10 92 1.5E-23 T 11-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 VSVS12_04139 c84db1172b4e0ea0878a0ca1bac145d0 464 SUPERFAMILY SSF46689 58 107 7.17E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_04139 c84db1172b4e0ea0878a0ca1bac145d0 464 Gene3D G3DSA:1.10.10.60 57 119 4.9E-13 T 11-10-2018 VSVS12_04139 c84db1172b4e0ea0878a0ca1bac145d0 464 SUPERFAMILY SSF46689 8 53 2.43E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_04139 c84db1172b4e0ea0878a0ca1bac145d0 464 Pfam PF12833 Helix-turn-helix domain 26 104 2.3E-18 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VSVS12_04139 c84db1172b4e0ea0878a0ca1bac145d0 464 Gene3D G3DSA:1.10.10.60 4 56 6.6E-13 T 11-10-2018 VSVS12_04139 c84db1172b4e0ea0878a0ca1bac145d0 464 SMART SM00342 20 103 3.8E-23 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VSVS12_02243 f9eef58af0f7d2d72c1055cc2bcab260 254 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 3.8E-65 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VSVS12_02243 f9eef58af0f7d2d72c1055cc2bcab260 254 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 3.8E-65 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VSVS12_02243 f9eef58af0f7d2d72c1055cc2bcab260 254 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 204 228 3.8E-65 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VSVS12_02243 f9eef58af0f7d2d72c1055cc2bcab260 254 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 3.8E-65 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VSVS12_02243 f9eef58af0f7d2d72c1055cc2bcab260 254 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 3.8E-65 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VSVS12_02243 f9eef58af0f7d2d72c1055cc2bcab260 254 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 3.8E-65 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VSVS12_02243 f9eef58af0f7d2d72c1055cc2bcab260 254 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 228 6.1E-85 T 11-10-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 VSVS12_02243 f9eef58af0f7d2d72c1055cc2bcab260 254 Pfam PF01578 Cytochrome C assembly protein 29 184 3.5E-31 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 VSVS12_01300 52b12ef1fd24530a6f39c7d444eff166 287 Gene3D G3DSA:3.10.129.90 3 286 3.2E-107 T 11-10-2018 VSVS12_01300 52b12ef1fd24530a6f39c7d444eff166 287 SUPERFAMILY SSF54637 7 115 4.98E-40 T 11-10-2018 IPR029069 HotDog domain superfamily VSVS12_01300 52b12ef1fd24530a6f39c7d444eff166 287 Pfam PF13622 Thioesterase-like superfamily 34 283 5.2E-61 T 11-10-2018 VSVS12_01300 52b12ef1fd24530a6f39c7d444eff166 287 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 13 284 1.4E-94 T 11-10-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247|Reactome: R-HSA-9033241 VSVS12_01300 52b12ef1fd24530a6f39c7d444eff166 287 SUPERFAMILY SSF54637 117 284 1.04E-59 T 11-10-2018 IPR029069 HotDog domain superfamily VSVS12_00768 57bf9154446f403402fbcfac6f0a267b 329 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 12 284 7.4E-82 T 11-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 VSVS12_00768 57bf9154446f403402fbcfac6f0a267b 329 SUPERFAMILY SSF51445 2 288 3.37E-84 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily VSVS12_00768 57bf9154446f403402fbcfac6f0a267b 329 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 229 246 - T 11-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 VSVS12_00768 57bf9154446f403402fbcfac6f0a267b 329 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 3 327 45.962 T 11-10-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VSVS12_00768 57bf9154446f403402fbcfac6f0a267b 329 Gene3D G3DSA:3.20.20.300 1 328 7.7E-127 T 11-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 VSVS12_01065 38001dddeec5e13f3e8a0a1f492d9a37 170 SUPERFAMILY SSF53218 7 168 6.02E-47 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily VSVS12_01065 38001dddeec5e13f3e8a0a1f492d9a37 170 Gene3D G3DSA:3.40.980.10 2 170 8.2E-52 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily VSVS12_01065 38001dddeec5e13f3e8a0a1f492d9a37 170 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 12 152 3.8E-37 T 11-10-2018 IPR001453 MoaB/Mog domain VSVS12_01065 38001dddeec5e13f3e8a0a1f492d9a37 170 SMART SM00852 14 158 6.0E-28 T 11-10-2018 IPR001453 MoaB/Mog domain VSVS12_01065 38001dddeec5e13f3e8a0a1f492d9a37 170 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 72 85 - T 11-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 VSVS12_01065 38001dddeec5e13f3e8a0a1f492d9a37 170 Pfam PF00994 Probable molybdopterin binding domain 14 156 4.2E-34 T 11-10-2018 IPR001453 MoaB/Mog domain VSVS12_01065 38001dddeec5e13f3e8a0a1f492d9a37 170 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 7 168 2.8E-84 T 11-10-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 VSVS12_01065 38001dddeec5e13f3e8a0a1f492d9a37 170 PIRSF PIRSF006443 1 166 5.4E-66 T 11-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 VSVS12_03411 ff9484b2c593f1777e5aaa2ae75153cf 576 Pfam PF00990 Diguanylate cyclase, GGDEF domain 385 541 4.2E-46 T 11-10-2018 IPR000160 GGDEF domain VSVS12_03411 ff9484b2c593f1777e5aaa2ae75153cf 576 SUPERFAMILY SSF55781 219 379 3.75E-12 T 11-10-2018 VSVS12_03411 ff9484b2c593f1777e5aaa2ae75153cf 576 SMART SM00065 240 381 3.1E-9 T 11-10-2018 IPR003018 GAF domain GO:0005515 VSVS12_03411 ff9484b2c593f1777e5aaa2ae75153cf 576 SUPERFAMILY SSF55073 389 545 5.34E-46 T 11-10-2018 IPR029787 Nucleotide cyclase VSVS12_03411 ff9484b2c593f1777e5aaa2ae75153cf 576 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 381 543 8.6E-50 T 11-10-2018 IPR000160 GGDEF domain VSVS12_03411 ff9484b2c593f1777e5aaa2ae75153cf 576 Gene3D G3DSA:3.30.70.270 381 552 8.0E-54 T 11-10-2018 VSVS12_03411 ff9484b2c593f1777e5aaa2ae75153cf 576 SMART SM00267 373 546 4.7E-58 T 11-10-2018 IPR000160 GGDEF domain VSVS12_03411 ff9484b2c593f1777e5aaa2ae75153cf 576 Gene3D G3DSA:3.30.450.40 213 380 1.6E-12 T 11-10-2018 IPR029016 GAF-like domain superfamily VSVS12_02410 85b2c27c2077309db24282518ca3bdef 139 Pfam PF16732 Type IV minor pilin ComP, DNA uptake sequence receptor 30 117 3.6E-11 T 11-10-2018 IPR031982 Type IV minor pilin ComP VSVS12_02410 85b2c27c2077309db24282518ca3bdef 139 Pfam PF07963 Prokaryotic N-terminal methylation motif 5 29 3.8E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_02410 85b2c27c2077309db24282518ca3bdef 139 SUPERFAMILY SSF54523 9 132 6.04E-16 T 11-10-2018 VSVS12_02410 85b2c27c2077309db24282518ca3bdef 139 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 29 1.4E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_02410 85b2c27c2077309db24282518ca3bdef 139 Gene3D G3DSA:3.30.700.10 10 138 2.5E-13 T 11-10-2018 VSVS12_03384 001b50a8da9c8aa96cff3b53a5956c86 261 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 258 9.1E-15 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VSVS12_03384 001b50a8da9c8aa96cff3b53a5956c86 261 Gene3D G3DSA:1.10.3720.10 3 255 2.3E-37 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_03384 001b50a8da9c8aa96cff3b53a5956c86 261 SUPERFAMILY SSF161098 11 257 1.78E-42 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_00681 aa7c3bb4ffbaadfa395e605b7097ffb2 458 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 208 268 6.3E-21 T 11-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 VSVS12_00681 aa7c3bb4ffbaadfa395e605b7097ffb2 458 SUPERFAMILY SSF81301 24 178 2.72E-39 T 11-10-2018 VSVS12_00681 aa7c3bb4ffbaadfa395e605b7097ffb2 458 SUPERFAMILY SSF81891 179 416 3.27E-48 T 11-10-2018 VSVS12_00681 aa7c3bb4ffbaadfa395e605b7097ffb2 458 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 7 453 37.36 T 11-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 VSVS12_00681 aa7c3bb4ffbaadfa395e605b7097ffb2 458 Gene3D G3DSA:1.10.3090.10 179 429 5.4E-95 T 11-10-2018 VSVS12_00681 aa7c3bb4ffbaadfa395e605b7097ffb2 458 Pfam PF12626 Polymerase A arginine-rich C-terminus 328 443 3.4E-38 T 11-10-2018 IPR025866 Polymerase A arginine-rich C-terminal domain VSVS12_00681 aa7c3bb4ffbaadfa395e605b7097ffb2 458 Gene3D G3DSA:3.30.460.10 18 177 4.2E-61 T 11-10-2018 VSVS12_00681 aa7c3bb4ffbaadfa395e605b7097ffb2 458 Pfam PF01743 Poly A polymerase head domain 52 181 3.8E-37 T 11-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 VSVS12_00681 aa7c3bb4ffbaadfa395e605b7097ffb2 458 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 21 451 1.5E-161 T 11-10-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 VSVS12_00010 dd23a6d866068f97b8b98585e0c09299 274 SUPERFAMILY SSF144091 96 272 1.57E-42 T 11-10-2018 VSVS12_00010 dd23a6d866068f97b8b98585e0c09299 274 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 3 272 6.5E-121 T 11-10-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 VSVS12_00010 dd23a6d866068f97b8b98585e0c09299 274 Gene3D G3DSA:3.30.70.2350 1 70 2.6E-24 T 11-10-2018 IPR038236 GlpG peptidase, N-terminal domain superfamily VSVS12_00010 dd23a6d866068f97b8b98585e0c09299 274 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 86 6.2E-32 T 11-10-2018 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 VSVS12_00010 dd23a6d866068f97b8b98585e0c09299 274 Pfam PF01694 Rhomboid family 134 272 5.8E-31 T 11-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 VSVS12_00010 dd23a6d866068f97b8b98585e0c09299 274 Gene3D G3DSA:1.20.1540.10 94 272 8.4E-54 T 11-10-2018 IPR035952 Rhomboid-like superfamily VSVS12_02172 0968a6e33dec855e1a4356b4be97581d 592 Gene3D G3DSA:3.30.930.10 118 578 5.2E-196 T 11-10-2018 VSVS12_02172 0968a6e33dec855e1a4356b4be97581d 592 Pfam PF00152 tRNA synthetases class II (D, K and N) 117 558 1.6E-104 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VSVS12_02172 0968a6e33dec855e1a4356b4be97581d 592 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 1.9E-16 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VSVS12_02172 0968a6e33dec855e1a4356b4be97581d 592 SUPERFAMILY SSF50249 1 105 2.86E-34 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_02172 0968a6e33dec855e1a4356b4be97581d 592 Gene3D G3DSA:3.30.1360.30 271 420 5.2E-196 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 VSVS12_02172 0968a6e33dec855e1a4356b4be97581d 592 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 583 4.5E-265 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 VSVS12_02172 0968a6e33dec855e1a4356b4be97581d 592 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 584 33.183 T 11-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 VSVS12_02172 0968a6e33dec855e1a4356b4be97581d 592 Pfam PF02938 GAD domain 307 406 2.2E-32 T 11-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 VSVS12_02172 0968a6e33dec855e1a4356b4be97581d 592 SUPERFAMILY SSF55681 108 583 1.19E-100 T 11-10-2018 VSVS12_02172 0968a6e33dec855e1a4356b4be97581d 592 SUPERFAMILY SSF55261 288 419 5.23E-47 T 11-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 VSVS12_02172 0968a6e33dec855e1a4356b4be97581d 592 Gene3D G3DSA:2.40.50.140 1 106 1.3E-34 T 11-10-2018 VSVS12_02172 0968a6e33dec855e1a4356b4be97581d 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 3.0E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VSVS12_02172 0968a6e33dec855e1a4356b4be97581d 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 3.0E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VSVS12_02172 0968a6e33dec855e1a4356b4be97581d 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 3.0E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VSVS12_02172 0968a6e33dec855e1a4356b4be97581d 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 3.0E-26 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VSVS12_01905 8115ddfe675eca94a674cf14d369c67e 545 SMART SM00283 271 532 8.7E-49 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_01905 8115ddfe675eca94a674cf14d369c67e 545 SUPERFAMILY SSF58104 225 533 6.54E-62 T 11-10-2018 VSVS12_01905 8115ddfe675eca94a674cf14d369c67e 545 Gene3D G3DSA:1.10.287.950 203 534 9.0E-64 T 11-10-2018 VSVS12_01905 8115ddfe675eca94a674cf14d369c67e 545 SMART SM00304 203 256 5.8E-5 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_01905 8115ddfe675eca94a674cf14d369c67e 545 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 343 497 6.4E-40 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_01905 8115ddfe675eca94a674cf14d369c67e 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 369 396 7.6E-23 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VSVS12_01905 8115ddfe675eca94a674cf14d369c67e 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 292 321 7.6E-23 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VSVS12_01905 8115ddfe675eca94a674cf14d369c67e 545 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 398 427 7.6E-23 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VSVS12_00291 8d77549900a1c93cbd10da1eda6b9c27 409 Gene3D G3DSA:1.20.81.30 259 370 1.2E-25 T 11-10-2018 VSVS12_00291 8d77549900a1c93cbd10da1eda6b9c27 409 Gene3D G3DSA:1.20.81.30 58 175 2.1E-36 T 11-10-2018 VSVS12_00291 8d77549900a1c93cbd10da1eda6b9c27 409 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 168 196 - T 11-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 VSVS12_00291 8d77549900a1c93cbd10da1eda6b9c27 409 TIGRFAM TIGR02120 GspF: type II secretion system protein F 4 405 3.4E-155 T 11-10-2018 IPR011850 General secretion pathway protein F GO:0008565|GO:0015627|GO:0015628 VSVS12_00291 8d77549900a1c93cbd10da1eda6b9c27 409 PRINTS PR00812 Bacterial general secretion pathway protein F signature 387 406 1.2E-36 T 11-10-2018 IPR003004 GspF/PilC family VSVS12_00291 8d77549900a1c93cbd10da1eda6b9c27 409 PRINTS PR00812 Bacterial general secretion pathway protein F signature 168 196 1.2E-36 T 11-10-2018 IPR003004 GspF/PilC family VSVS12_00291 8d77549900a1c93cbd10da1eda6b9c27 409 PRINTS PR00812 Bacterial general secretion pathway protein F signature 371 385 1.2E-36 T 11-10-2018 IPR003004 GspF/PilC family VSVS12_00291 8d77549900a1c93cbd10da1eda6b9c27 409 PRINTS PR00812 Bacterial general secretion pathway protein F signature 69 81 1.2E-36 T 11-10-2018 IPR003004 GspF/PilC family VSVS12_00291 8d77549900a1c93cbd10da1eda6b9c27 409 Pfam PF00482 Type II secretion system (T2SS), protein F 276 398 1.5E-24 T 11-10-2018 IPR018076 Type II secretion system F domain VSVS12_00291 8d77549900a1c93cbd10da1eda6b9c27 409 Pfam PF00482 Type II secretion system (T2SS), protein F 74 196 2.4E-33 T 11-10-2018 IPR018076 Type II secretion system F domain VSVS12_03053 e3e1715de7459a0e0d9964d8c4f032ec 432 SUPERFAMILY SSF53474 48 421 1.09E-32 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold VSVS12_03053 e3e1715de7459a0e0d9964d8c4f032ec 432 Pfam PF00561 alpha/beta hydrolase fold 51 236 8.5E-24 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VSVS12_03053 e3e1715de7459a0e0d9964d8c4f032ec 432 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 53 61 2.5E-8 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 VSVS12_03053 e3e1715de7459a0e0d9964d8c4f032ec 432 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 140 154 2.5E-8 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 VSVS12_03053 e3e1715de7459a0e0d9964d8c4f032ec 432 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 83 94 2.5E-8 T 11-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 VSVS12_03053 e3e1715de7459a0e0d9964d8c4f032ec 432 Gene3D G3DSA:3.40.50.1820 33 423 1.3E-25 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold VSVS12_00363 8b39e1928cc65f8b3c0d766716448cb6 489 SUPERFAMILY SSF103190 139 232 1.1E-6 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VSVS12_00363 8b39e1928cc65f8b3c0d766716448cb6 489 Gene3D G3DSA:3.30.70.270 310 485 2.5E-44 T 11-10-2018 VSVS12_00363 8b39e1928cc65f8b3c0d766716448cb6 489 SMART SM00267 313 486 6.0E-44 T 11-10-2018 IPR000160 GGDEF domain VSVS12_00363 8b39e1928cc65f8b3c0d766716448cb6 489 SUPERFAMILY SSF55073 329 484 5.41E-36 T 11-10-2018 IPR029787 Nucleotide cyclase VSVS12_00363 8b39e1928cc65f8b3c0d766716448cb6 489 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 321 485 4.4E-36 T 11-10-2018 IPR000160 GGDEF domain VSVS12_00363 8b39e1928cc65f8b3c0d766716448cb6 489 Gene3D G3DSA:3.30.450.20 127 226 2.9E-8 T 11-10-2018 VSVS12_00363 8b39e1928cc65f8b3c0d766716448cb6 489 Pfam PF00990 Diguanylate cyclase, GGDEF domain 324 482 1.1E-32 T 11-10-2018 IPR000160 GGDEF domain VSVS12_00180 11ec223dd63e5698ddaab3069de6eda9 723 SUPERFAMILY SSF52096 2 306 5.51E-64 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VSVS12_00180 11ec223dd63e5698ddaab3069de6eda9 723 SUPERFAMILY SSF48179 496 603 1.96E-28 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VSVS12_00180 11ec223dd63e5698ddaab3069de6eda9 723 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 716 51.684 T 11-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VSVS12_00180 11ec223dd63e5698ddaab3069de6eda9 723 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 494 518 - T 11-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VSVS12_00180 11ec223dd63e5698ddaab3069de6eda9 723 Gene3D G3DSA:3.90.226.10 1 312 1.5E-90 T 11-10-2018 VSVS12_00180 11ec223dd63e5698ddaab3069de6eda9 723 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 210 3.2E-39 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 VSVS12_00180 11ec223dd63e5698ddaab3069de6eda9 723 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 317 495 8.4E-59 T 11-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VSVS12_00180 11ec223dd63e5698ddaab3069de6eda9 723 Gene3D G3DSA:3.40.50.720 314 497 2.9E-65 T 11-10-2018 VSVS12_00180 11ec223dd63e5698ddaab3069de6eda9 723 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 715 0.0 T 11-10-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-7292|MetaCyc: PWY-7307|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VSVS12_00180 11ec223dd63e5698ddaab3069de6eda9 723 Gene3D G3DSA:1.10.1040.50 498 710 5.0E-72 T 11-10-2018 VSVS12_00180 11ec223dd63e5698ddaab3069de6eda9 723 SUPERFAMILY SSF48179 625 716 1.19E-24 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VSVS12_00180 11ec223dd63e5698ddaab3069de6eda9 723 SUPERFAMILY SSF51735 314 496 5.4E-56 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_00180 11ec223dd63e5698ddaab3069de6eda9 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 497 593 1.7E-25 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VSVS12_00180 11ec223dd63e5698ddaab3069de6eda9 723 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 628 712 2.4E-7 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VSVS12_01064 cf8a195071d435931d94419faa21e7a8 329 SMART SM00729 14 219 9.0E-5 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VSVS12_01064 cf8a195071d435931d94419faa21e7a8 329 Pfam PF06463 Molybdenum Cofactor Synthesis C 186 312 7.2E-39 T 11-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VSVS12_01064 cf8a195071d435931d94419faa21e7a8 329 Pfam PF13353 4Fe-4S single cluster domain 23 125 2.6E-9 T 11-10-2018 VSVS12_01064 cf8a195071d435931d94419faa21e7a8 329 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 5 329 36.523 T 11-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VSVS12_01064 cf8a195071d435931d94419faa21e7a8 329 Pfam PF04055 Radical SAM superfamily 19 181 1.5E-24 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VSVS12_01064 cf8a195071d435931d94419faa21e7a8 329 SUPERFAMILY SSF102114 5 278 1.44E-68 T 11-10-2018 VSVS12_01064 cf8a195071d435931d94419faa21e7a8 329 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 5 329 4.4E-103 T 11-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VSVS12_01064 cf8a195071d435931d94419faa21e7a8 329 Gene3D G3DSA:3.20.20.70 1 329 8.1E-83 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_03474 e4b32b5f51fafc6a13fd348592462ba9 380 Pfam PF13378 Enolase C-terminal domain-like 159 373 7.9E-54 T 11-10-2018 IPR029065 Enolase C-terminal domain-like VSVS12_03474 e4b32b5f51fafc6a13fd348592462ba9 380 Gene3D G3DSA:3.30.390.10 8 377 6.5E-125 T 11-10-2018 IPR029017 Enolase-like, N-terminal VSVS12_03474 e4b32b5f51fafc6a13fd348592462ba9 380 SUPERFAMILY SSF51604 119 379 1.57E-65 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VSVS12_03474 e4b32b5f51fafc6a13fd348592462ba9 380 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 32 131 5.4E-16 T 11-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain VSVS12_03474 e4b32b5f51fafc6a13fd348592462ba9 380 SUPERFAMILY SSF54826 6 136 3.21E-27 T 11-10-2018 VSVS12_03474 e4b32b5f51fafc6a13fd348592462ba9 380 SMART SM00922 151 253 1.7E-8 T 11-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal VSVS12_03474 e4b32b5f51fafc6a13fd348592462ba9 380 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 106 131 - T 11-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 VSVS12_03474 e4b32b5f51fafc6a13fd348592462ba9 380 Gene3D G3DSA:3.20.20.120 124 370 6.5E-125 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VSVS12_00286 e5bfc3956bddb36680a8039d3d899713 296 SUPERFAMILY SSF64397 9 236 9.94E-75 T 11-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 VSVS12_00286 e5bfc3956bddb36680a8039d3d899713 296 Gene3D G3DSA:1.10.287.480 183 229 3.5E-22 T 11-10-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain superfamily VSVS12_00286 e5bfc3956bddb36680a8039d3d899713 296 PIRSF PIRSF005261 2 289 2.5E-71 T 11-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 VSVS12_00286 e5bfc3956bddb36680a8039d3d899713 296 Hamap MF_00117 33 kDa chaperonin [hslO]. 8 288 31.7 T 11-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 VSVS12_00286 e5bfc3956bddb36680a8039d3d899713 296 Gene3D G3DSA:3.90.1280.10 230 289 4.3E-20 T 11-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 VSVS12_00286 e5bfc3956bddb36680a8039d3d899713 296 Gene3D G3DSA:3.55.30.10 4 180 2.9E-62 T 11-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 VSVS12_00286 e5bfc3956bddb36680a8039d3d899713 296 Pfam PF01430 Hsp33 protein 11 277 4.8E-79 T 11-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 VSVS12_00286 e5bfc3956bddb36680a8039d3d899713 296 SUPERFAMILY SSF118352 228 285 2.22E-18 T 11-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 VSVS12_01073 b05ae3e1afe67ee291b64271af99228d 685 Pfam PF01588 Putative tRNA binding domain 590 682 1.3E-26 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 VSVS12_01073 b05ae3e1afe67ee291b64271af99228d 685 Gene3D G3DSA:3.40.50.620 9 384 7.3E-161 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VSVS12_01073 b05ae3e1afe67ee291b64271af99228d 685 SUPERFAMILY SSF50249 583 684 1.03E-34 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_01073 b05ae3e1afe67ee291b64271af99228d 685 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 9 535 4.7E-200 T 11-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VSVS12_01073 b05ae3e1afe67ee291b64271af99228d 685 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 545 41.538 T 11-10-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VSVS12_01073 b05ae3e1afe67ee291b64271af99228d 685 Gene3D G3DSA:1.10.730.10 389 526 2.4E-34 T 11-10-2018 VSVS12_01073 b05ae3e1afe67ee291b64271af99228d 685 Pfam PF09334 tRNA synthetases class I (M) 9 396 5.0E-165 T 11-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 VSVS12_01073 b05ae3e1afe67ee291b64271af99228d 685 Gene3D G3DSA:2.40.50.140 575 685 2.4E-36 T 11-10-2018 VSVS12_01073 b05ae3e1afe67ee291b64271af99228d 685 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 6.9E-25 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VSVS12_01073 b05ae3e1afe67ee291b64271af99228d 685 PRINTS PR01041 Methionyl-tRNA synthetase signature 384 395 6.9E-25 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VSVS12_01073 b05ae3e1afe67ee291b64271af99228d 685 PRINTS PR01041 Methionyl-tRNA synthetase signature 251 262 6.9E-25 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VSVS12_01073 b05ae3e1afe67ee291b64271af99228d 685 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 6.9E-25 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VSVS12_01073 b05ae3e1afe67ee291b64271af99228d 685 PRINTS PR01041 Methionyl-tRNA synthetase signature 291 306 6.9E-25 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VSVS12_01073 b05ae3e1afe67ee291b64271af99228d 685 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 6.9E-25 T 11-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VSVS12_01073 b05ae3e1afe67ee291b64271af99228d 685 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VSVS12_01073 b05ae3e1afe67ee291b64271af99228d 685 SUPERFAMILY SSF52374 4 387 1.92E-101 T 11-10-2018 VSVS12_01073 b05ae3e1afe67ee291b64271af99228d 685 SUPERFAMILY SSF57770 142 176 5.89E-13 T 11-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VSVS12_01073 b05ae3e1afe67ee291b64271af99228d 685 SUPERFAMILY SSF47323 386 598 2.4E-44 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VSVS12_01073 b05ae3e1afe67ee291b64271af99228d 685 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 551 684 4.9E-47 T 11-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 VSVS12_01073 b05ae3e1afe67ee291b64271af99228d 685 Gene3D G3DSA:2.20.28.20 142 176 7.3E-161 T 11-10-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VSVS12_01218 4f84dcf38ecb61268276cadcb845daa0 616 Gene3D G3DSA:3.40.1750.10 186 497 1.1E-159 T 11-10-2018 VSVS12_01218 4f84dcf38ecb61268276cadcb845daa0 616 SUPERFAMILY SSF52096 315 529 3.15E-40 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VSVS12_01218 4f84dcf38ecb61268276cadcb845daa0 616 Gene3D G3DSA:3.90.226.10 94 314 1.1E-159 T 11-10-2018 VSVS12_01218 4f84dcf38ecb61268276cadcb845daa0 616 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 608 3.3E-195 T 11-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 VSVS12_01218 4f84dcf38ecb61268276cadcb845daa0 616 SUPERFAMILY SSF52096 47 284 6.09E-27 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VSVS12_01218 4f84dcf38ecb61268276cadcb845daa0 616 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 327 540 4.1E-52 T 11-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 VSVS12_01218 4f84dcf38ecb61268276cadcb845daa0 616 Pfam PF01343 Peptidase family S49 391 541 4.9E-45 T 11-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 VSVS12_01218 4f84dcf38ecb61268276cadcb845daa0 616 Pfam PF01343 Peptidase family S49 138 292 1.2E-30 T 11-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 VSVS12_01218 4f84dcf38ecb61268276cadcb845daa0 616 Gene3D G3DSA:3.90.226.10 315 540 1.1E-159 T 11-10-2018 VSVS12_01218 4f84dcf38ecb61268276cadcb845daa0 616 PIRSF PIRSF001217 8 616 1.1E-225 T 11-10-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 VSVS12_02525 5deee9125b1284bd88ecab1ee07eb146 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 67 1.9E-20 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_02525 5deee9125b1284bd88ecab1ee07eb146 297 Pfam PF03466 LysR substrate binding domain 91 294 1.4E-32 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_02525 5deee9125b1284bd88ecab1ee07eb146 297 SUPERFAMILY SSF53850 91 296 6.33E-36 T 11-10-2018 VSVS12_02525 5deee9125b1284bd88ecab1ee07eb146 297 Gene3D G3DSA:3.40.190.10 165 264 2.0E-47 T 11-10-2018 VSVS12_02525 5deee9125b1284bd88ecab1ee07eb146 297 Gene3D G3DSA:1.10.10.10 6 92 1.4E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_02525 5deee9125b1284bd88ecab1ee07eb146 297 SUPERFAMILY SSF46785 5 78 4.33E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_02525 5deee9125b1284bd88ecab1ee07eb146 297 Gene3D G3DSA:3.40.190.10 103 291 2.0E-47 T 11-10-2018 VSVS12_02525 5deee9125b1284bd88ecab1ee07eb146 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 5.4E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_02525 5deee9125b1284bd88ecab1ee07eb146 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 5.4E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_02525 5deee9125b1284bd88ecab1ee07eb146 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 5.4E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_02861 581bcb6045ed4737040cfecd3e36ff38 450 Gene3D G3DSA:3.40.1190.10 91 313 3.2E-57 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VSVS12_02861 581bcb6045ed4737040cfecd3e36ff38 450 Gene3D G3DSA:3.90.190.20 314 450 1.0E-32 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VSVS12_02861 581bcb6045ed4737040cfecd3e36ff38 450 Gene3D G3DSA:3.40.50.720 1 90 5.6E-36 T 11-10-2018 VSVS12_02861 581bcb6045ed4737040cfecd3e36ff38 450 Pfam PF02875 Mur ligase family, glutamate ligase domain 311 387 2.4E-10 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VSVS12_02861 581bcb6045ed4737040cfecd3e36ff38 450 TIGRFAM TIGR01081 mpl: UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase 2 448 1.8E-261 T 11-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 VSVS12_02861 581bcb6045ed4737040cfecd3e36ff38 450 SUPERFAMILY SSF51984 1 89 5.49E-23 T 11-10-2018 VSVS12_02861 581bcb6045ed4737040cfecd3e36ff38 450 Pfam PF01225 Mur ligase family, catalytic domain 2 101 4.4E-20 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 VSVS12_02861 581bcb6045ed4737040cfecd3e36ff38 450 SUPERFAMILY SSF53623 97 308 7.2E-52 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VSVS12_02861 581bcb6045ed4737040cfecd3e36ff38 450 Hamap MF_02020 UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptandioate ligase [mpl]. 1 449 59.179 T 11-10-2018 IPR005757 Murein peptide ligase GO:0009252|GO:0016881|GO:0071555 MetaCyc: PWY-7883 VSVS12_02861 581bcb6045ed4737040cfecd3e36ff38 450 Pfam PF08245 Mur ligase middle domain 108 291 1.3E-21 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VSVS12_02861 581bcb6045ed4737040cfecd3e36ff38 450 SUPERFAMILY SSF53244 311 447 3.4E-38 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VSVS12_04006 b1885055412c70c93bdaf32083806817 102 SUPERFAMILY SSF46689 7 99 1.72E-19 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_04006 b1885055412c70c93bdaf32083806817 102 Gene3D G3DSA:1.10.10.60 10 93 2.9E-13 T 11-10-2018 VSVS12_04006 b1885055412c70c93bdaf32083806817 102 Pfam PF01527 Transposase 8 80 9.6E-15 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 VSVS12_00426 39e370006accbcd72770dcc4bb33e4d1 333 Gene3D G3DSA:3.30.360.10 153 311 2.1E-120 T 11-10-2018 VSVS12_00426 39e370006accbcd72770dcc4bb33e4d1 333 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 332 1.5E-116 T 11-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VSVS12_00426 39e370006accbcd72770dcc4bb33e4d1 333 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 4 145 1.3E-29 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VSVS12_00426 39e370006accbcd72770dcc4bb33e4d1 333 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 163 310 6.4E-12 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VSVS12_00426 39e370006accbcd72770dcc4bb33e4d1 333 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 333 37.656 T 11-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VSVS12_00426 39e370006accbcd72770dcc4bb33e4d1 333 Gene3D G3DSA:3.40.50.720 6 328 2.1E-120 T 11-10-2018 VSVS12_00426 39e370006accbcd72770dcc4bb33e4d1 333 SUPERFAMILY SSF55347 154 307 1.96E-47 T 11-10-2018 VSVS12_00426 39e370006accbcd72770dcc4bb33e4d1 333 SUPERFAMILY SSF51735 3 183 2.61E-42 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_00426 39e370006accbcd72770dcc4bb33e4d1 333 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 11-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VSVS12_00426 39e370006accbcd72770dcc4bb33e4d1 333 SMART SM00859 3 146 3.9E-45 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VSVS12_01002 b54db5035e4f82558ac0cf02c7a7d3a5 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 45.145 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 VSVS12_01002 b54db5035e4f82558ac0cf02c7a7d3a5 363 SUPERFAMILY SSF52540 3 301 3.74E-83 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01002 b54db5035e4f82558ac0cf02c7a7d3a5 363 Pfam PF01926 50S ribosome-binding GTPase 5 115 5.8E-22 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 VSVS12_01002 b54db5035e4f82558ac0cf02c7a7d3a5 363 Gene3D G3DSA:1.10.150.300 120 200 9.4E-151 T 11-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 VSVS12_01002 b54db5035e4f82558ac0cf02c7a7d3a5 363 PIRSF PIRSF006641 1 363 5.6E-157 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 VSVS12_01002 b54db5035e4f82558ac0cf02c7a7d3a5 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.9E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 VSVS12_01002 b54db5035e4f82558ac0cf02c7a7d3a5 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.9E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 VSVS12_01002 b54db5035e4f82558ac0cf02c7a7d3a5 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.9E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 VSVS12_01002 b54db5035e4f82558ac0cf02c7a7d3a5 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.9E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 VSVS12_01002 b54db5035e4f82558ac0cf02c7a7d3a5 363 Gene3D G3DSA:3.10.20.30 48 362 9.4E-151 T 11-10-2018 IPR012675 Beta-grasp domain superfamily VSVS12_01002 b54db5035e4f82558ac0cf02c7a7d3a5 363 SUPERFAMILY SSF81271 279 360 1.53E-36 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VSVS12_01002 b54db5035e4f82558ac0cf02c7a7d3a5 363 Gene3D G3DSA:3.40.50.300 4 278 9.4E-151 T 11-10-2018 VSVS12_01002 b54db5035e4f82558ac0cf02c7a7d3a5 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 2.0E-168 T 11-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 VSVS12_01002 b54db5035e4f82558ac0cf02c7a7d3a5 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 3.5E-39 T 11-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 VSVS12_03923 fb45df1fce623234a4c1b5c0aaa2185f 301 Gene3D G3DSA:1.10.10.10 3 89 1.8E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_03923 fb45df1fce623234a4c1b5c0aaa2185f 301 SUPERFAMILY SSF53850 90 287 7.84E-41 T 11-10-2018 VSVS12_03923 fb45df1fce623234a4c1b5c0aaa2185f 301 Pfam PF03466 LysR substrate binding domain 90 286 3.2E-45 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_03923 fb45df1fce623234a4c1b5c0aaa2185f 301 Gene3D G3DSA:3.40.190.10 92 276 9.3E-39 T 11-10-2018 VSVS12_03923 fb45df1fce623234a4c1b5c0aaa2185f 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.5E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_03923 fb45df1fce623234a4c1b5c0aaa2185f 301 Gene3D G3DSA:3.40.190.10 165 268 9.3E-39 T 11-10-2018 VSVS12_03923 fb45df1fce623234a4c1b5c0aaa2185f 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 4.7E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_03923 fb45df1fce623234a4c1b5c0aaa2185f 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 4.7E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_03923 fb45df1fce623234a4c1b5c0aaa2185f 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 4.7E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_03923 fb45df1fce623234a4c1b5c0aaa2185f 301 SUPERFAMILY SSF46785 2 112 1.59E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_03797 4a85c18c1a691bb202278ea364a9a1d0 458 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VSVS12_03797 4a85c18c1a691bb202278ea364a9a1d0 458 SMART SM00490 256 337 8.5E-29 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_03797 4a85c18c1a691bb202278ea364a9a1d0 458 Pfam PF00270 DEAD/DEAH box helicase 27 193 6.0E-47 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VSVS12_03797 4a85c18c1a691bb202278ea364a9a1d0 458 Pfam PF03880 DbpA RNA binding domain 385 455 1.2E-20 T 11-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain VSVS12_03797 4a85c18c1a691bb202278ea364a9a1d0 458 SMART SM00487 22 219 1.3E-60 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VSVS12_03797 4a85c18c1a691bb202278ea364a9a1d0 458 Gene3D G3DSA:3.40.50.300 1 209 8.0E-75 T 11-10-2018 VSVS12_03797 4a85c18c1a691bb202278ea364a9a1d0 458 Gene3D G3DSA:3.30.70.330 384 458 6.1E-19 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily VSVS12_03797 4a85c18c1a691bb202278ea364a9a1d0 458 Gene3D G3DSA:3.40.50.300 210 369 8.7E-45 T 11-10-2018 VSVS12_03797 4a85c18c1a691bb202278ea364a9a1d0 458 SUPERFAMILY SSF52540 72 354 1.23E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03797 4a85c18c1a691bb202278ea364a9a1d0 458 Pfam PF00271 Helicase conserved C-terminal domain 230 337 1.4E-26 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_02461 104c0c2176ee80db2d820950d0d11921 1173 SUPERFAMILY SSF52540 2 366 1.06E-120 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02461 104c0c2176ee80db2d820950d0d11921 1173 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 2 831 1.7E-298 T 11-10-2018 VSVS12_02461 104c0c2176ee80db2d820950d0d11921 1173 SUPERFAMILY SSF52980 858 1159 2.47E-73 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VSVS12_02461 104c0c2176ee80db2d820950d0d11921 1173 Gene3D G3DSA:3.40.50.300 354 833 1.1E-191 T 11-10-2018 VSVS12_02461 104c0c2176ee80db2d820950d0d11921 1173 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1171 20.75 T 11-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 VSVS12_02461 104c0c2176ee80db2d820950d0d11921 1173 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1134 0.0 T 11-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 VSVS12_02461 104c0c2176ee80db2d820950d0d11921 1173 Gene3D G3DSA:1.10.10.990 894 972 2.8E-20 T 11-10-2018 VSVS12_02461 104c0c2176ee80db2d820950d0d11921 1173 SUPERFAMILY SSF52540 381 837 1.27E-102 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02461 104c0c2176ee80db2d820950d0d11921 1173 Gene3D G3DSA:1.10.486.10 472 684 1.1E-191 T 11-10-2018 VSVS12_02461 104c0c2176ee80db2d820950d0d11921 1173 PIRSF PIRSF000980 1 1172 0.0 T 11-10-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 VSVS12_02461 104c0c2176ee80db2d820950d0d11921 1173 Gene3D G3DSA:1.10.10.160 79 187 1.0E-124 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily VSVS12_02461 104c0c2176ee80db2d820950d0d11921 1173 Gene3D G3DSA:3.40.50.10930 4 336 1.0E-124 T 11-10-2018 VSVS12_03330 f1d264bf68db581abff95e5c5d91fc16 148 Gene3D G3DSA:3.40.630.30 1 142 2.1E-19 T 11-10-2018 VSVS12_03330 f1d264bf68db581abff95e5c5d91fc16 148 Pfam PF00583 Acetyltransferase (GNAT) family 26 128 5.4E-9 T 11-10-2018 IPR000182 GNAT domain VSVS12_03330 f1d264bf68db581abff95e5c5d91fc16 148 SUPERFAMILY SSF55729 1 134 1.1E-22 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_03388 422398d4e95a7177e94a228bf715d59a 238 Gene3D G3DSA:3.40.1410.10 78 235 1.2E-29 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VSVS12_03388 422398d4e95a7177e94a228bf715d59a 238 SUPERFAMILY SSF64288 57 232 6.12E-37 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VSVS12_03388 422398d4e95a7177e94a228bf715d59a 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 2.7E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VSVS12_03388 422398d4e95a7177e94a228bf715d59a 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 2.7E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VSVS12_03388 422398d4e95a7177e94a228bf715d59a 238 SUPERFAMILY SSF46785 10 74 4.99E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_03388 422398d4e95a7177e94a228bf715d59a 238 Pfam PF07702 UTRA domain 91 227 3.4E-31 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VSVS12_03388 422398d4e95a7177e94a228bf715d59a 238 SMART SM00866 90 229 4.1E-18 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VSVS12_03388 422398d4e95a7177e94a228bf715d59a 238 SMART SM00345 10 69 6.2E-11 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VSVS12_03388 422398d4e95a7177e94a228bf715d59a 238 Gene3D G3DSA:1.10.10.10 7 74 1.2E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_03388 422398d4e95a7177e94a228bf715d59a 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 69 1.1E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VSVS12_03143 c38a429c4e442316b77b781e7cc9928b 427 PIRSF PIRSF006066 1 425 5.2E-137 T 11-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VSVS12_03143 c38a429c4e442316b77b781e7cc9928b 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 414 2.8E-116 T 11-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VSVS12_03143 c38a429c4e442316b77b781e7cc9928b 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 15 419 1.1E-137 T 11-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VSVS12_00347 1e0498a9e9fc59ef18686431c2b92555 229 Pfam PF02348 Cytidylyltransferase 3 216 3.9E-37 T 11-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 VSVS12_00347 1e0498a9e9fc59ef18686431c2b92555 229 Gene3D G3DSA:3.90.550.10 2 225 5.6E-67 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VSVS12_00347 1e0498a9e9fc59ef18686431c2b92555 229 SUPERFAMILY SSF53448 3 224 1.06E-57 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VSVS12_00347 1e0498a9e9fc59ef18686431c2b92555 229 TIGRFAM TIGR03584 PseF: pseudaminic acid cytidylyltransferase 3 224 6.9E-104 T 11-10-2018 IPR020039 Pseudaminic acid cytidylyltransferase KEGG: 00520+2.7.7.81|MetaCyc: PWY-6143 VSVS12_02718 f7586bcecbc7213bf04b5add199112a6 412 SUPERFAMILY SSF56349 119 396 3.92E-44 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VSVS12_02718 f7586bcecbc7213bf04b5add199112a6 412 Pfam PF00589 Phage integrase family 224 388 1.1E-22 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VSVS12_02718 f7586bcecbc7213bf04b5add199112a6 412 Pfam PF13356 Arm DNA-binding domain 7 107 1.1E-8 T 11-10-2018 IPR025166 Integrase, DNA-binding domain VSVS12_02718 f7586bcecbc7213bf04b5add199112a6 412 Gene3D G3DSA:1.10.150.130 111 220 3.7E-5 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal VSVS12_02718 f7586bcecbc7213bf04b5add199112a6 412 Gene3D G3DSA:1.10.443.10 222 404 1.6E-28 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VSVS12_02718 f7586bcecbc7213bf04b5add199112a6 412 Gene3D G3DSA:3.30.160.390 6 108 9.8E-7 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily VSVS12_00209 2f33680952cfef43e5dbed7426c677ba 359 ProSitePatterns PS00618 RecF protein signature 2. 299 317 - T 11-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 VSVS12_00209 2f33680952cfef43e5dbed7426c677ba 359 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 354 3.2E-37 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal VSVS12_00209 2f33680952cfef43e5dbed7426c677ba 359 ProSitePatterns PS00617 RecF protein signature 1. 118 138 - T 11-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 VSVS12_00209 2f33680952cfef43e5dbed7426c677ba 359 Gene3D G3DSA:3.40.50.300 8 332 5.9E-81 T 11-10-2018 VSVS12_00209 2f33680952cfef43e5dbed7426c677ba 359 SUPERFAMILY SSF52540 1 341 3.76E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00209 2f33680952cfef43e5dbed7426c677ba 359 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 359 97.053 T 11-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 VSVS12_00209 2f33680952cfef43e5dbed7426c677ba 359 Gene3D G3DSA:1.20.1050.90 121 298 5.9E-81 T 11-10-2018 VSVS12_00209 2f33680952cfef43e5dbed7426c677ba 359 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 356 4.0E-119 T 11-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 VSVS12_00208 be333009b720c6a82220f22294cb20b0 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 130 243 3.6E-34 T 11-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 VSVS12_00208 be333009b720c6a82220f22294cb20b0 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 3.3E-38 T 11-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 VSVS12_00208 be333009b720c6a82220f22294cb20b0 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 9.8E-108 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 VSVS12_00208 be333009b720c6a82220f22294cb20b0 366 SUPERFAMILY SSF55979 1 118 1.22E-30 T 11-10-2018 VSVS12_00208 be333009b720c6a82220f22294cb20b0 366 SUPERFAMILY SSF55979 126 244 4.45E-28 T 11-10-2018 VSVS12_00208 be333009b720c6a82220f22294cb20b0 366 PIRSF PIRSF000804 1 366 3.5E-118 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 VSVS12_00208 be333009b720c6a82220f22294cb20b0 366 SUPERFAMILY SSF55979 245 366 2.11E-36 T 11-10-2018 VSVS12_00208 be333009b720c6a82220f22294cb20b0 366 Gene3D G3DSA:3.10.150.10 248 366 6.0E-40 T 11-10-2018 VSVS12_00208 be333009b720c6a82220f22294cb20b0 366 Gene3D G3DSA:3.10.150.10 124 247 3.3E-35 T 11-10-2018 VSVS12_00208 be333009b720c6a82220f22294cb20b0 366 SMART SM00480 17 362 1.2E-145 T 11-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 VSVS12_00208 be333009b720c6a82220f22294cb20b0 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 119 3.3E-38 T 11-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 VSVS12_00208 be333009b720c6a82220f22294cb20b0 366 Gene3D G3DSA:3.10.150.10 1 122 1.7E-42 T 11-10-2018 VSVS12_00495 c6d0f12cf6669482b076265582bdd99c 206 SMART SM01390 3 95 6.8E-50 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 VSVS12_00495 c6d0f12cf6669482b076265582bdd99c 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.14 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 VSVS12_00495 c6d0f12cf6669482b076265582bdd99c 206 SUPERFAMILY SSF55174 3 206 1.24E-71 T 11-10-2018 VSVS12_00495 c6d0f12cf6669482b076265582bdd99c 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 1.6E-32 T 11-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 VSVS12_00495 c6d0f12cf6669482b076265582bdd99c 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 7.0E-85 T 11-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 VSVS12_00495 c6d0f12cf6669482b076265582bdd99c 206 Gene3D G3DSA:3.10.290.10 103 191 1.1E-35 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VSVS12_00495 c6d0f12cf6669482b076265582bdd99c 206 SMART SM00363 96 160 6.8E-19 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00495 c6d0f12cf6669482b076265582bdd99c 206 Pfam PF01479 S4 domain 97 143 1.3E-17 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00495 c6d0f12cf6669482b076265582bdd99c 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 11-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00495 c6d0f12cf6669482b076265582bdd99c 206 Gene3D G3DSA:1.10.1050.10 1 102 5.8E-45 T 11-10-2018 VSVS12_01285 610c6589b5f18ea13d24a1a9d8c28cfb 579 Gene3D G3DSA:3.40.50.1220 219 353 3.6E-34 T 11-10-2018 VSVS12_01285 610c6589b5f18ea13d24a1a9d8c28cfb 579 SUPERFAMILY SSF52518 399 565 3.19E-23 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold VSVS12_01285 610c6589b5f18ea13d24a1a9d8c28cfb 579 SUPERFAMILY SSF52518 12 182 1.61E-29 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold VSVS12_01285 610c6589b5f18ea13d24a1a9d8c28cfb 579 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 17 147 4.5E-28 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VSVS12_01285 610c6589b5f18ea13d24a1a9d8c28cfb 579 Pfam PF16582 Middle domain of thiamine pyrophosphate 192 408 1.0E-36 T 11-10-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 VSVS12_01285 610c6589b5f18ea13d24a1a9d8c28cfb 579 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 443 557 5.6E-6 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VSVS12_01285 610c6589b5f18ea13d24a1a9d8c28cfb 579 PIRSF PIRSF004983 7 579 1.5E-171 T 11-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 VSVS12_01285 610c6589b5f18ea13d24a1a9d8c28cfb 579 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 10 575 31.457 T 11-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 VSVS12_01285 610c6589b5f18ea13d24a1a9d8c28cfb 579 Gene3D G3DSA:3.40.50.970 8 204 2.3E-56 T 11-10-2018 VSVS12_01285 610c6589b5f18ea13d24a1a9d8c28cfb 579 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 16 451 9.9E-125 T 11-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 VSVS12_01285 610c6589b5f18ea13d24a1a9d8c28cfb 579 Gene3D G3DSA:3.40.50.970 374 576 3.4E-49 T 11-10-2018 VSVS12_00496 bf28b0eadeab1122763517c72a57e7e3 330 SMART SM00662 23 235 9.5E-104 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VSVS12_00496 bf28b0eadeab1122763517c72a57e7e3 330 SUPERFAMILY SSF47789 252 326 1.44E-25 T 11-10-2018 VSVS12_00496 bf28b0eadeab1122763517c72a57e7e3 330 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 318 34.642 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VSVS12_00496 bf28b0eadeab1122763517c72a57e7e3 330 Gene3D G3DSA:2.170.120.12 53 178 4.2E-83 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VSVS12_00496 bf28b0eadeab1122763517c72a57e7e3 330 SUPERFAMILY SSF55257 7 234 5.99E-30 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VSVS12_00496 bf28b0eadeab1122763517c72a57e7e3 330 Gene3D G3DSA:1.10.150.20 245 330 1.4E-38 T 11-10-2018 VSVS12_00496 bf28b0eadeab1122763517c72a57e7e3 330 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 229 1.7E-23 T 11-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VSVS12_00496 bf28b0eadeab1122763517c72a57e7e3 330 Gene3D G3DSA:3.30.1360.10 17 229 4.2E-83 T 11-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VSVS12_00496 bf28b0eadeab1122763517c72a57e7e3 330 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 317 2.0E-111 T 11-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VSVS12_00496 bf28b0eadeab1122763517c72a57e7e3 330 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 246 309 7.1E-24 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VSVS12_00496 bf28b0eadeab1122763517c72a57e7e3 330 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 257 330 2.0E-36 T 11-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VSVS12_00496 bf28b0eadeab1122763517c72a57e7e3 330 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 62 157 5.7E-24 T 11-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VSVS12_00496 bf28b0eadeab1122763517c72a57e7e3 330 SUPERFAMILY SSF56553 53 179 1.33E-40 T 11-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VSVS12_02277 7cf45ab63dff70c0017aa174bb190a54 337 Gene3D G3DSA:3.30.360.10 130 316 9.8E-150 T 11-10-2018 VSVS12_02277 7cf45ab63dff70c0017aa174bb190a54 337 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 333 35.747 T 11-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VSVS12_02277 7cf45ab63dff70c0017aa174bb190a54 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 319 2.8E-60 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VSVS12_02277 7cf45ab63dff70c0017aa174bb190a54 337 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 6 334 5.8E-129 T 11-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VSVS12_02277 7cf45ab63dff70c0017aa174bb190a54 337 SMART SM00859 6 121 8.4E-38 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VSVS12_02277 7cf45ab63dff70c0017aa174bb190a54 337 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 232 246 - T 11-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VSVS12_02277 7cf45ab63dff70c0017aa174bb190a54 337 SUPERFAMILY SSF55347 131 320 6.85E-77 T 11-10-2018 VSVS12_02277 7cf45ab63dff70c0017aa174bb190a54 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 120 2.0E-30 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VSVS12_02277 7cf45ab63dff70c0017aa174bb190a54 337 SUPERFAMILY SSF51735 5 159 3.64E-51 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_02277 7cf45ab63dff70c0017aa174bb190a54 337 PIRSF PIRSF000148 4 337 2.2E-131 T 11-10-2018 VSVS12_02277 7cf45ab63dff70c0017aa174bb190a54 337 Gene3D G3DSA:3.40.50.720 7 330 9.8E-150 T 11-10-2018 VSVS12_01146 318c7c41bcd3e98b1e4b6e054b7d1cfc 350 Pfam PF05343 M42 glutamyl aminopeptidase 44 329 1.0E-75 T 11-10-2018 IPR008007 Peptidase M42 VSVS12_01146 318c7c41bcd3e98b1e4b6e054b7d1cfc 350 Gene3D G3DSA:2.40.30.40 69 154 9.2E-93 T 11-10-2018 IPR023367 Peptidase M42, domain 2 VSVS12_01146 318c7c41bcd3e98b1e4b6e054b7d1cfc 350 SUPERFAMILY SSF53187 5 342 4.19E-55 T 11-10-2018 VSVS12_01146 318c7c41bcd3e98b1e4b6e054b7d1cfc 350 Gene3D G3DSA:3.40.630.10 6 330 9.2E-93 T 11-10-2018 VSVS12_01146 318c7c41bcd3e98b1e4b6e054b7d1cfc 350 PIRSF PIRSF001123 1 346 1.0E-93 T 11-10-2018 IPR008007 Peptidase M42 VSVS12_01146 318c7c41bcd3e98b1e4b6e054b7d1cfc 350 SUPERFAMILY SSF101821 69 171 1.3E-20 T 11-10-2018 VSVS12_00656 602485b8cf32b9c30ee28a4d49795b87 506 SUPERFAMILY SSF52949 1 184 6.47E-52 T 11-10-2018 VSVS12_00656 602485b8cf32b9c30ee28a4d49795b87 506 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 187 489 4.3E-123 T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VSVS12_00656 602485b8cf32b9c30ee28a4d49795b87 506 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 7.8E-34 T 11-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VSVS12_00656 602485b8cf32b9c30ee28a4d49795b87 506 PRINTS PR00481 Cytosol aminopeptidase signature 345 365 5.0E-55 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VSVS12_00656 602485b8cf32b9c30ee28a4d49795b87 506 PRINTS PR00481 Cytosol aminopeptidase signature 286 307 5.0E-55 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VSVS12_00656 602485b8cf32b9c30ee28a4d49795b87 506 PRINTS PR00481 Cytosol aminopeptidase signature 323 344 5.0E-55 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VSVS12_00656 602485b8cf32b9c30ee28a4d49795b87 506 PRINTS PR00481 Cytosol aminopeptidase signature 373 388 5.0E-55 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VSVS12_00656 602485b8cf32b9c30ee28a4d49795b87 506 PRINTS PR00481 Cytosol aminopeptidase signature 264 281 5.0E-55 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VSVS12_00656 602485b8cf32b9c30ee28a4d49795b87 506 Gene3D G3DSA:3.40.220.10 1 159 1.6E-59 T 11-10-2018 VSVS12_00656 602485b8cf32b9c30ee28a4d49795b87 506 SUPERFAMILY SSF53187 179 496 1.35E-124 T 11-10-2018 VSVS12_00656 602485b8cf32b9c30ee28a4d49795b87 506 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 497 40.845 T 11-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 VSVS12_00656 602485b8cf32b9c30ee28a4d49795b87 506 Gene3D G3DSA:3.40.630.10 181 497 2.1E-140 T 11-10-2018 VSVS12_00656 602485b8cf32b9c30ee28a4d49795b87 506 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 349 356 - T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VSVS12_01624 d90292d4f40790f898c64e399f9fbef7 253 Pfam PF13181 Tetratricopeptide repeat 152 182 0.012 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_01624 d90292d4f40790f898c64e399f9fbef7 253 TIGRFAM TIGR02521 type_IV_pilW: type IV pilus biogenesis/stability protein PilW 20 250 1.4E-68 T 11-10-2018 IPR013360 Pilus biogenesis/stability type IV, PilW VSVS12_01624 d90292d4f40790f898c64e399f9fbef7 253 Pfam PF07719 Tetratricopeptide repeat 46 79 4.2E-7 T 11-10-2018 IPR013105 Tetratricopeptide repeat 2 VSVS12_01624 d90292d4f40790f898c64e399f9fbef7 253 SMART SM00028 114 147 13.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_01624 d90292d4f40790f898c64e399f9fbef7 253 SMART SM00028 46 79 5.2E-5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_01624 d90292d4f40790f898c64e399f9fbef7 253 SMART SM00028 150 183 0.43 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_01624 d90292d4f40790f898c64e399f9fbef7 253 SMART SM00028 80 113 0.015 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_01624 d90292d4f40790f898c64e399f9fbef7 253 Gene3D G3DSA:1.25.40.10 40 252 5.4E-41 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_01624 d90292d4f40790f898c64e399f9fbef7 253 SUPERFAMILY SSF48452 45 211 4.43E-27 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_01624 d90292d4f40790f898c64e399f9fbef7 253 Pfam PF13431 Tetratricopeptide repeat 102 134 4.4E-7 T 11-10-2018 VSVS12_01407 7d291093d323183de70a772f0737e181 1309 Pfam PF11898 Domain of unknown function (DUF3418) 723 1307 3.0E-230 T 11-10-2018 IPR024590 RNA helicase HrpA, C-terminal VSVS12_01407 7d291093d323183de70a772f0737e181 1309 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 26 1306 0.0 T 11-10-2018 IPR010222 RNA helicase HrpA GO:0004004 VSVS12_01407 7d291093d323183de70a772f0737e181 1309 Gene3D G3DSA:3.40.50.300 265 432 4.1E-55 T 11-10-2018 VSVS12_01407 7d291093d323183de70a772f0737e181 1309 Pfam PF00270 DEAD/DEAH box helicase 99 245 7.0E-8 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VSVS12_01407 7d291093d323183de70a772f0737e181 1309 SMART SM00490 315 415 5.5E-16 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_01407 7d291093d323183de70a772f0737e181 1309 SMART SM00487 87 271 5.7E-30 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VSVS12_01407 7d291093d323183de70a772f0737e181 1309 SMART SM00382 104 395 6.2E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_01407 7d291093d323183de70a772f0737e181 1309 Gene3D G3DSA:3.40.50.300 40 264 2.3E-77 T 11-10-2018 VSVS12_01407 7d291093d323183de70a772f0737e181 1309 SUPERFAMILY SSF52540 84 578 1.54E-113 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01407 7d291093d323183de70a772f0737e181 1309 Pfam PF04408 Helicase associated domain (HA2) 477 568 1.5E-17 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 VSVS12_01407 7d291093d323183de70a772f0737e181 1309 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 633 710 1.1E-22 T 11-10-2018 IPR011709 Domain of unknown function DUF1605 VSVS12_01407 7d291093d323183de70a772f0737e181 1309 SMART SM00847 475 570 3.5E-34 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 VSVS12_01407 7d291093d323183de70a772f0737e181 1309 Gene3D G3DSA:1.20.120.1080 459 560 1.9E-17 T 11-10-2018 VSVS12_01407 7d291093d323183de70a772f0737e181 1309 Pfam PF00271 Helicase conserved C-terminal domain 300 414 5.5E-12 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_01814 c760eb4c51d1f89b3fef422be301fd20 298 Pfam PF04055 Radical SAM superfamily 28 230 1.4E-18 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VSVS12_01814 c760eb4c51d1f89b3fef422be301fd20 298 Gene3D G3DSA:3.20.20.70 9 57 3.6E-12 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_01814 c760eb4c51d1f89b3fef422be301fd20 298 Gene3D G3DSA:3.20.20.70 58 287 6.5E-34 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_01814 c760eb4c51d1f89b3fef422be301fd20 298 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 50 61 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VSVS12_01814 c760eb4c51d1f89b3fef422be301fd20 298 Pfam PF13353 4Fe-4S single cluster domain 20 186 2.8E-10 T 11-10-2018 VSVS12_01814 c760eb4c51d1f89b3fef422be301fd20 298 TIGRFAM TIGR04041 activase_YjjW: glycine radical enzyme activase, YjjW family 9 290 1.6E-122 T 11-10-2018 IPR023912 Putative glycyl-radical enzyme activating enzyme YjjW VSVS12_01814 c760eb4c51d1f89b3fef422be301fd20 298 SUPERFAMILY SSF54862 27 148 5.23E-14 T 11-10-2018 VSVS12_01814 c760eb4c51d1f89b3fef422be301fd20 298 PIRSF PIRSF000371 2 298 9.3E-87 T 11-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 VSVS12_01814 c760eb4c51d1f89b3fef422be301fd20 298 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 86 97 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VSVS12_01814 c760eb4c51d1f89b3fef422be301fd20 298 ProSitePatterns PS01087 Radical activating enzymes signature. 22 43 - T 11-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 VSVS12_01082 eaf73e77d22e3afe3e5ee356418893e5 111 Pfam PF00462 Glutaredoxin 16 80 5.3E-17 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VSVS12_01082 eaf73e77d22e3afe3e5ee356418893e5 111 PIRSF PIRSF005894 1 107 4.0E-51 T 11-10-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 VSVS12_01082 eaf73e77d22e3afe3e5ee356418893e5 111 Gene3D G3DSA:3.40.30.10 2 107 5.7E-31 T 11-10-2018 VSVS12_01082 eaf73e77d22e3afe3e5ee356418893e5 111 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 4 100 1.5E-45 T 11-10-2018 IPR004480 Monothiol glutaredoxin-related VSVS12_01082 eaf73e77d22e3afe3e5ee356418893e5 111 SUPERFAMILY SSF52833 1 104 7.0E-34 T 11-10-2018 IPR036249 Thioredoxin-like superfamily VSVS12_00225 e57b786502617d05a5858ca3b69a8566 80 SUPERFAMILY SSF54211 4 67 4.93E-9 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VSVS12_00225 e57b786502617d05a5858ca3b69a8566 80 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 67 3.7E-16 T 11-10-2018 VSVS12_04233 b3ca4c1474e2a756da47a051fb840c83 211 Pfam PF01810 LysE type translocator 16 204 1.9E-29 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VSVS12_04233 b3ca4c1474e2a756da47a051fb840c83 211 PIRSF PIRSF006324 1 209 6.8E-53 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VSVS12_04110 6b15608f06317cbf20019bdf70945b83 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 1.8E-39 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VSVS12_04110 6b15608f06317cbf20019bdf70945b83 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 5 20 1.8E-39 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VSVS12_04110 6b15608f06317cbf20019bdf70945b83 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 1.8E-39 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VSVS12_04110 6b15608f06317cbf20019bdf70945b83 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 112 132 1.8E-39 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VSVS12_04110 6b15608f06317cbf20019bdf70945b83 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 74 90 1.8E-39 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VSVS12_04110 6b15608f06317cbf20019bdf70945b83 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 96 109 1.8E-39 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VSVS12_04110 6b15608f06317cbf20019bdf70945b83 450 PRINTS PR00732 Glycosyl hydrolase family 4 signature 141 158 1.8E-39 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VSVS12_04110 6b15608f06317cbf20019bdf70945b83 450 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 420 4.3E-61 T 11-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 VSVS12_04110 6b15608f06317cbf20019bdf70945b83 450 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 141 172 - T 11-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 VSVS12_04110 6b15608f06317cbf20019bdf70945b83 450 Pfam PF02056 Family 4 glycosyl hydrolase 5 187 1.4E-75 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VSVS12_04110 6b15608f06317cbf20019bdf70945b83 450 Gene3D G3DSA:3.90.1820.20 1 442 1.0E-136 T 11-10-2018 VSVS12_04110 6b15608f06317cbf20019bdf70945b83 450 SUPERFAMILY SSF56327 173 448 2.01E-70 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VSVS12_04110 6b15608f06317cbf20019bdf70945b83 450 SUPERFAMILY SSF51735 3 170 4.18E-52 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_02192 00b7419afb35378619143bfe24407fae 485 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 7 482 3.9E-162 T 11-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 VSVS12_02192 00b7419afb35378619143bfe24407fae 485 Pfam PF08323 Starch synthase catalytic domain 8 238 5.2E-68 T 11-10-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 VSVS12_02192 00b7419afb35378619143bfe24407fae 485 Gene3D G3DSA:3.40.50.2000 8 481 2.1E-158 T 11-10-2018 VSVS12_02192 00b7419afb35378619143bfe24407fae 485 Hamap MF_00484 Glycogen synthase [glgA]. 6 483 39.289 T 11-10-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 VSVS12_02192 00b7419afb35378619143bfe24407fae 485 Pfam PF00534 Glycosyl transferases group 1 302 436 6.8E-16 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 VSVS12_02192 00b7419afb35378619143bfe24407fae 485 Gene3D G3DSA:3.40.50.2000 256 467 2.1E-158 T 11-10-2018 VSVS12_02192 00b7419afb35378619143bfe24407fae 485 SUPERFAMILY SSF53756 5 485 3.45E-108 T 11-10-2018 VSVS12_01771 7161ae73ac433f27401182afbcc844dc 767 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 443 5.8E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_01771 7161ae73ac433f27401182afbcc844dc 767 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 462 5.8E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_01771 7161ae73ac433f27401182afbcc844dc 767 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 404 5.8E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_01771 7161ae73ac433f27401182afbcc844dc 767 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 418 5.8E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_01771 7161ae73ac433f27401182afbcc844dc 767 Gene3D G3DSA:1.20.120.160 641 755 6.2E-17 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 VSVS12_01771 7161ae73ac433f27401182afbcc844dc 767 SUPERFAMILY SSF52172 486 607 1.34E-36 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_01771 7161ae73ac433f27401182afbcc844dc 767 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 349 464 4.7E-30 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_01771 7161ae73ac433f27401182afbcc844dc 767 SUPERFAMILY SSF158472 171 220 2.48E-5 T 11-10-2018 VSVS12_01771 7161ae73ac433f27401182afbcc844dc 767 Gene3D G3DSA:3.40.50.2300 476 611 3.9E-41 T 11-10-2018 VSVS12_01771 7161ae73ac433f27401182afbcc844dc 767 SUPERFAMILY SSF47226 647 753 1.15E-17 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 VSVS12_01771 7161ae73ac433f27401182afbcc844dc 767 Pfam PF00512 His Kinase A (phospho-acceptor) domain 237 301 2.6E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_01771 7161ae73ac433f27401182afbcc844dc 767 SMART SM00387 349 465 1.1E-32 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_01771 7161ae73ac433f27401182afbcc844dc 767 Gene3D G3DSA:1.10.287.130 226 303 9.8E-21 T 11-10-2018 VSVS12_01771 7161ae73ac433f27401182afbcc844dc 767 SMART SM00304 170 222 3.0E-5 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_01771 7161ae73ac433f27401182afbcc844dc 767 SUPERFAMILY SSF55874 291 461 9.43E-42 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_01771 7161ae73ac433f27401182afbcc844dc 767 Gene3D G3DSA:3.30.565.10 304 469 4.8E-47 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_01771 7161ae73ac433f27401182afbcc844dc 767 Gene3D G3DSA:1.20.1480.50 134 225 2.2E-8 T 11-10-2018 VSVS12_01771 7161ae73ac433f27401182afbcc844dc 767 SMART SM00448 487 602 5.7E-36 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_01771 7161ae73ac433f27401182afbcc844dc 767 Pfam PF00072 Response regulator receiver domain 489 603 4.7E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_01771 7161ae73ac433f27401182afbcc844dc 767 SMART SM00388 237 302 1.3E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_01771 7161ae73ac433f27401182afbcc844dc 767 SUPERFAMILY SSF47384 223 302 1.92E-19 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VSVS12_03711 f2e7b69c74a1e01750e551e774e3fe58 253 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_03711 f2e7b69c74a1e01750e551e774e3fe58 253 SMART SM00382 31 234 3.3E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_03711 f2e7b69c74a1e01750e551e774e3fe58 253 SUPERFAMILY SSF52540 3 250 3.92E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03711 f2e7b69c74a1e01750e551e774e3fe58 253 Pfam PF00005 ABC transporter 23 178 2.1E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_03711 f2e7b69c74a1e01750e551e774e3fe58 253 Gene3D G3DSA:3.40.50.300 4 253 7.6E-62 T 11-10-2018 VSVS12_02401 a4bfd0a93e3f854960deb5e37d8cc3cf 521 Pfam PF01464 Transglycosylase SLT domain 308 413 1.7E-22 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 VSVS12_02401 a4bfd0a93e3f854960deb5e37d8cc3cf 521 Gene3D G3DSA:3.40.190.10 37 274 1.7E-71 T 11-10-2018 VSVS12_02401 a4bfd0a93e3f854960deb5e37d8cc3cf 521 SUPERFAMILY SSF53955 256 460 6.82E-37 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily VSVS12_02401 a4bfd0a93e3f854960deb5e37d8cc3cf 521 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 320 348 - T 11-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VSVS12_02401 a4bfd0a93e3f854960deb5e37d8cc3cf 521 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 8 486 48.456 T 11-10-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 VSVS12_02401 a4bfd0a93e3f854960deb5e37d8cc3cf 521 SUPERFAMILY SSF53850 44 278 7.03E-35 T 11-10-2018 VSVS12_02401 a4bfd0a93e3f854960deb5e37d8cc3cf 521 Gene3D G3DSA:1.10.530.10 298 474 1.5E-34 T 11-10-2018 VSVS12_02401 a4bfd0a93e3f854960deb5e37d8cc3cf 521 Gene3D G3DSA:3.40.190.10 128 235 1.7E-71 T 11-10-2018 VSVS12_02401 a4bfd0a93e3f854960deb5e37d8cc3cf 521 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 278 4.7E-31 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VSVS12_02401 a4bfd0a93e3f854960deb5e37d8cc3cf 521 SMART SM00062 43 279 7.7E-25 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VSVS12_01140 d7cea86dd4258e767cbbdfacdb877100 398 SUPERFAMILY SSF53383 1 396 8.16E-83 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VSVS12_01140 d7cea86dd4258e767cbbdfacdb877100 398 Pfam PF00155 Aminotransferase class I and II 31 388 6.1E-46 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VSVS12_01140 d7cea86dd4258e767cbbdfacdb877100 398 Gene3D G3DSA:3.90.1150.10 33 387 4.9E-112 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VSVS12_01140 d7cea86dd4258e767cbbdfacdb877100 398 Gene3D G3DSA:3.40.640.10 43 292 4.9E-112 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VSVS12_02644 3b1b8bd4df27201fdb4088f1d40e3317 929 Pfam PF01627 Hpt domain 833 916 2.2E-13 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VSVS12_02644 3b1b8bd4df27201fdb4088f1d40e3317 929 SMART SM00387 401 517 3.4E-38 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_02644 3b1b8bd4df27201fdb4088f1d40e3317 929 SUPERFAMILY SSF158472 199 246 6.28E-7 T 11-10-2018 VSVS12_02644 3b1b8bd4df27201fdb4088f1d40e3317 929 PRINTS PR00344 Bacterial sensor protein C-terminal signature 501 514 1.0E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_02644 3b1b8bd4df27201fdb4088f1d40e3317 929 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 495 1.0E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_02644 3b1b8bd4df27201fdb4088f1d40e3317 929 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 456 1.0E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_02644 3b1b8bd4df27201fdb4088f1d40e3317 929 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 470 1.0E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_02644 3b1b8bd4df27201fdb4088f1d40e3317 929 Pfam PF00072 Response regulator receiver domain 667 777 8.6E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_02644 3b1b8bd4df27201fdb4088f1d40e3317 929 Gene3D G3DSA:3.40.50.2300 654 788 2.5E-37 T 11-10-2018 VSVS12_02644 3b1b8bd4df27201fdb4088f1d40e3317 929 SUPERFAMILY SSF52172 532 644 6.15E-7 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_02644 3b1b8bd4df27201fdb4088f1d40e3317 929 SUPERFAMILY SSF52172 664 784 9.39E-36 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_02644 3b1b8bd4df27201fdb4088f1d40e3317 929 Gene3D G3DSA:1.10.287.130 275 355 8.8E-27 T 11-10-2018 VSVS12_02644 3b1b8bd4df27201fdb4088f1d40e3317 929 SUPERFAMILY SSF47226 761 916 3.01E-24 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 VSVS12_02644 3b1b8bd4df27201fdb4088f1d40e3317 929 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 401 515 1.0E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_02644 3b1b8bd4df27201fdb4088f1d40e3317 929 SMART SM00304 197 249 2.1E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_02644 3b1b8bd4df27201fdb4088f1d40e3317 929 SMART SM00073 823 917 3.3E-7 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VSVS12_02644 3b1b8bd4df27201fdb4088f1d40e3317 929 SUPERFAMILY SSF47384 274 355 1.75E-22 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VSVS12_02644 3b1b8bd4df27201fdb4088f1d40e3317 929 Gene3D G3DSA:1.20.120.160 812 927 2.7E-33 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 VSVS12_02644 3b1b8bd4df27201fdb4088f1d40e3317 929 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 31 174 1.3E-48 T 11-10-2018 IPR019247 Histidine kinase BarA, N-terminal VSVS12_02644 3b1b8bd4df27201fdb4088f1d40e3317 929 Gene3D G3DSA:1.20.1480.50 164 269 2.9E-7 T 11-10-2018 VSVS12_02644 3b1b8bd4df27201fdb4088f1d40e3317 929 SUPERFAMILY SSF55874 343 516 1.96E-44 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_02644 3b1b8bd4df27201fdb4088f1d40e3317 929 Pfam PF00512 His Kinase A (phospho-acceptor) domain 290 354 4.6E-20 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_02644 3b1b8bd4df27201fdb4088f1d40e3317 929 SMART SM00388 289 354 1.6E-24 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_02644 3b1b8bd4df27201fdb4088f1d40e3317 929 Gene3D G3DSA:3.30.565.10 356 520 4.6E-51 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_02644 3b1b8bd4df27201fdb4088f1d40e3317 929 SMART SM00448 665 778 3.2E-35 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_03443 5cb39d6e879b5c30e31cb472481cd80b 2594 SUPERFAMILY SSF49313 1210 1296 6.8E-10 T 11-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 VSVS12_03443 5cb39d6e879b5c30e31cb472481cd80b 2594 Gene3D G3DSA:2.160.20.110 826 1058 4.2E-20 T 11-10-2018 VSVS12_03443 5cb39d6e879b5c30e31cb472481cd80b 2594 Gene3D G3DSA:2.160.20.110 63 304 3.2E-26 T 11-10-2018 VSVS12_03443 5cb39d6e879b5c30e31cb472481cd80b 2594 SUPERFAMILY SSF49313 356 440 3.14E-8 T 11-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 VSVS12_03443 5cb39d6e879b5c30e31cb472481cd80b 2594 Gene3D G3DSA:2.60.40.10 352 436 7.6E-7 T 11-10-2018 IPR013783 Immunoglobulin-like fold VSVS12_03443 5cb39d6e879b5c30e31cb472481cd80b 2594 Gene3D G3DSA:2.60.40.10 1204 1292 1.8E-6 T 11-10-2018 IPR013783 Immunoglobulin-like fold VSVS12_03443 5cb39d6e879b5c30e31cb472481cd80b 2594 Gene3D G3DSA:2.60.40.10 1776 1871 4.4E-13 T 11-10-2018 IPR013783 Immunoglobulin-like fold VSVS12_03443 5cb39d6e879b5c30e31cb472481cd80b 2594 SMART SM00736 350 442 0.0082 T 11-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 VSVS12_03443 5cb39d6e879b5c30e31cb472481cd80b 2594 SMART SM00736 1204 1298 0.019 T 11-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 VSVS12_03443 5cb39d6e879b5c30e31cb472481cd80b 2594 SUPERFAMILY SSF49313 1778 1870 2.88E-13 T 11-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 VSVS12_00646 710f7f97a4adc8cac6b2b1578bfacafd 129 Gene3D G3DSA:3.30.1330.40 1 129 9.6E-47 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VSVS12_00646 710f7f97a4adc8cac6b2b1578bfacafd 129 Pfam PF01042 Endoribonuclease L-PSP 8 127 9.4E-44 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 VSVS12_00646 710f7f97a4adc8cac6b2b1578bfacafd 129 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 127 1.1E-52 T 11-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 VSVS12_00646 710f7f97a4adc8cac6b2b1578bfacafd 129 SUPERFAMILY SSF55298 2 128 2.98E-43 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VSVS12_00646 710f7f97a4adc8cac6b2b1578bfacafd 129 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 104 122 - T 11-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 VSVS12_00920 0d87c171718c3fa8a546a4267d7f09ae 858 SUPERFAMILY SSF47323 661 857 5.61E-33 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VSVS12_00920 0d87c171718c3fa8a546a4267d7f09ae 858 Pfam PF08264 Anticodon-binding domain of tRNA 700 820 2.0E-15 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 VSVS12_00920 0d87c171718c3fa8a546a4267d7f09ae 858 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 857 0.0 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VSVS12_00920 0d87c171718c3fa8a546a4267d7f09ae 858 Gene3D G3DSA:3.40.50.620 33 565 0.0 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VSVS12_00920 0d87c171718c3fa8a546a4267d7f09ae 858 SUPERFAMILY SSF50677 226 415 4.19E-57 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VSVS12_00920 0d87c171718c3fa8a546a4267d7f09ae 858 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 618 650 1.7E-7 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 VSVS12_00920 0d87c171718c3fa8a546a4267d7f09ae 858 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 172 4.7E-26 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 VSVS12_00920 0d87c171718c3fa8a546a4267d7f09ae 858 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 418 571 1.5E-9 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 VSVS12_00920 0d87c171718c3fa8a546a4267d7f09ae 858 Gene3D G3DSA:3.10.330.110 566 627 0.0 T 11-10-2018 VSVS12_00920 0d87c171718c3fa8a546a4267d7f09ae 858 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 404 5.9E-79 T 11-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 VSVS12_00920 0d87c171718c3fa8a546a4267d7f09ae 858 Gene3D G3DSA:1.10.730.10 8 789 0.0 T 11-10-2018 VSVS12_00920 0d87c171718c3fa8a546a4267d7f09ae 858 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 857 23.338 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VSVS12_00920 0d87c171718c3fa8a546a4267d7f09ae 858 SUPERFAMILY SSF52374 4 667 2.14E-147 T 11-10-2018 VSVS12_00920 0d87c171718c3fa8a546a4267d7f09ae 858 Gene3D G3DSA:3.90.740.10 227 414 0.0 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VSVS12_00920 0d87c171718c3fa8a546a4267d7f09ae 858 Gene3D G3DSA:3.10.20.590 797 857 7.7E-22 T 11-10-2018 VSVS12_00920 0d87c171718c3fa8a546a4267d7f09ae 858 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VSVS12_00920 0d87c171718c3fa8a546a4267d7f09ae 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 7.8E-52 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VSVS12_00920 0d87c171718c3fa8a546a4267d7f09ae 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 7.8E-52 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VSVS12_00920 0d87c171718c3fa8a546a4267d7f09ae 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 7.8E-52 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VSVS12_00920 0d87c171718c3fa8a546a4267d7f09ae 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 7.8E-52 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VSVS12_00920 0d87c171718c3fa8a546a4267d7f09ae 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 556 566 7.8E-52 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VSVS12_00920 0d87c171718c3fa8a546a4267d7f09ae 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 7.8E-52 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VSVS12_00920 0d87c171718c3fa8a546a4267d7f09ae 858 PRINTS PR00985 Leucyl-tRNA synthetase signature 523 545 7.8E-52 T 11-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 VSVS12_03555 639d81eee10f41b8189b4ef2fc002e2d 554 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 84 540 2.9E-134 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VSVS12_03555 639d81eee10f41b8189b4ef2fc002e2d 554 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 45 540 2.6E-171 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VSVS12_03560 bcf123cc83065c0e786b20b45ff0d1b6 441 Pfam PF13437 HlyD family secretion protein 287 369 5.3E-13 T 11-10-2018 VSVS12_03560 bcf123cc83065c0e786b20b45ff0d1b6 441 Gene3D G3DSA:2.40.30.170 324 417 3.9E-8 T 11-10-2018 VSVS12_03560 bcf123cc83065c0e786b20b45ff0d1b6 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 66 86 2.3E-41 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VSVS12_03560 bcf123cc83065c0e786b20b45ff0d1b6 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 332 356 2.3E-41 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VSVS12_03560 bcf123cc83065c0e786b20b45ff0d1b6 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 356 379 2.3E-41 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VSVS12_03560 bcf123cc83065c0e786b20b45ff0d1b6 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 420 440 2.3E-41 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VSVS12_03560 bcf123cc83065c0e786b20b45ff0d1b6 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 299 320 2.3E-41 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VSVS12_03560 bcf123cc83065c0e786b20b45ff0d1b6 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 405 420 2.3E-41 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VSVS12_03560 bcf123cc83065c0e786b20b45ff0d1b6 441 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 24 47 2.3E-41 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VSVS12_03560 bcf123cc83065c0e786b20b45ff0d1b6 441 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 16 440 1.4E-94 T 11-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 VSVS12_03560 bcf123cc83065c0e786b20b45ff0d1b6 441 Gene3D G3DSA:1.10.287.470 159 286 3.9E-8 T 11-10-2018 VSVS12_03560 bcf123cc83065c0e786b20b45ff0d1b6 441 Gene3D G3DSA:2.40.50.100 287 323 3.9E-8 T 11-10-2018 VSVS12_03560 bcf123cc83065c0e786b20b45ff0d1b6 441 Gene3D G3DSA:2.40.50.100 57 120 5.9E-5 T 11-10-2018 VSVS12_01327 772d42d44780631e360ccf8dc42421cf 1016 Gene3D G3DSA:3.30.2090.10 182 275 1.5E-241 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VSVS12_01327 772d42d44780631e360ccf8dc42421cf 1016 Gene3D G3DSA:3.30.70.1320 138 328 1.5E-241 T 11-10-2018 VSVS12_01327 772d42d44780631e360ccf8dc42421cf 1016 SUPERFAMILY SSF82866 297 495 2.62E-30 T 11-10-2018 VSVS12_01327 772d42d44780631e360ccf8dc42421cf 1016 Gene3D G3DSA:3.30.70.1430 557 655 1.5E-241 T 11-10-2018 VSVS12_01327 772d42d44780631e360ccf8dc42421cf 1016 SUPERFAMILY SSF82714 707 789 1.7E-9 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VSVS12_01327 772d42d44780631e360ccf8dc42421cf 1016 Gene3D G3DSA:3.30.70.1430 40 805 1.5E-241 T 11-10-2018 VSVS12_01327 772d42d44780631e360ccf8dc42421cf 1016 Gene3D G3DSA:3.30.70.1440 656 855 1.5E-241 T 11-10-2018 VSVS12_01327 772d42d44780631e360ccf8dc42421cf 1016 Gene3D G3DSA:1.20.1640.10 12 502 1.5E-241 T 11-10-2018 VSVS12_01327 772d42d44780631e360ccf8dc42421cf 1016 SUPERFAMILY SSF82714 187 269 9.81E-14 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VSVS12_01327 772d42d44780631e360ccf8dc42421cf 1016 Gene3D G3DSA:1.20.1640.10 503 1005 1.5E-241 T 11-10-2018 VSVS12_01327 772d42d44780631e360ccf8dc42421cf 1016 SUPERFAMILY SSF82693 138 324 3.66E-18 T 11-10-2018 VSVS12_01327 772d42d44780631e360ccf8dc42421cf 1016 SUPERFAMILY SSF82693 41 137 1.96E-17 T 11-10-2018 VSVS12_01327 772d42d44780631e360ccf8dc42421cf 1016 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 4.5E-25 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_01327 772d42d44780631e360ccf8dc42421cf 1016 PRINTS PR00702 Acriflavin resistance protein family signature 540 557 4.5E-25 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_01327 772d42d44780631e360ccf8dc42421cf 1016 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 4.5E-25 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_01327 772d42d44780631e360ccf8dc42421cf 1016 PRINTS PR00702 Acriflavin resistance protein family signature 468 491 4.5E-25 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_01327 772d42d44780631e360ccf8dc42421cf 1016 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 4.5E-25 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_01327 772d42d44780631e360ccf8dc42421cf 1016 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 4.5E-25 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_01327 772d42d44780631e360ccf8dc42421cf 1016 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 7.3E-160 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_01327 772d42d44780631e360ccf8dc42421cf 1016 SUPERFAMILY SSF82866 793 1012 4.58E-44 T 11-10-2018 VSVS12_01327 772d42d44780631e360ccf8dc42421cf 1016 Gene3D G3DSA:3.30.2090.10 707 797 1.5E-241 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VSVS12_00499 e1fd484e0654bceff29d59116bec361f 206 Gene3D G3DSA:1.10.287.460 4 67 4.4E-20 T 11-10-2018 IPR036944 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal domain superfamily GO:0006457 VSVS12_00499 e1fd484e0654bceff29d59116bec361f 206 Gene3D G3DSA:3.10.50.40 68 206 2.8E-49 T 11-10-2018 VSVS12_00499 e1fd484e0654bceff29d59116bec361f 206 SUPERFAMILY SSF54534 7 205 1.96E-54 T 11-10-2018 VSVS12_00499 e1fd484e0654bceff29d59116bec361f 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 116 203 9.8E-27 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VSVS12_00499 e1fd484e0654bceff29d59116bec361f 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 2 108 3.2E-24 T 11-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 VSVS12_02013 b9a9e4f0efba19323be6a1b7c3c1c542 617 Pfam PF13387 Domain of unknown function (DUF4105) 119 290 5.3E-58 T 11-10-2018 IPR025178 Domain of unknown function DUF4105 VSVS12_00959 6f068e8f6cdb5c3e0fb99448a509a7e7 359 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 106 116 1.4E-5 T 11-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 VSVS12_00959 6f068e8f6cdb5c3e0fb99448a509a7e7 359 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 351 359 1.4E-5 T 11-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 VSVS12_00959 6f068e8f6cdb5c3e0fb99448a509a7e7 359 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 166 177 1.4E-5 T 11-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 VSVS12_00959 6f068e8f6cdb5c3e0fb99448a509a7e7 359 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 67 78 1.4E-5 T 11-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 VSVS12_00959 6f068e8f6cdb5c3e0fb99448a509a7e7 359 Gene3D G3DSA:2.40.160.10 31 359 4.6E-31 T 11-10-2018 IPR023614 Porin domain superfamily VSVS12_00959 6f068e8f6cdb5c3e0fb99448a509a7e7 359 SUPERFAMILY SSF56935 30 359 1.26E-30 T 11-10-2018 VSVS12_01864 f2d2b4de63ecdfb8c44e0fbc22fe46b5 595 Gene3D G3DSA:3.20.20.450 343 591 6.8E-97 T 11-10-2018 IPR035919 EAL domain superfamily VSVS12_01864 f2d2b4de63ecdfb8c44e0fbc22fe46b5 595 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 165 326 1.2E-29 T 11-10-2018 IPR000160 GGDEF domain VSVS12_01864 f2d2b4de63ecdfb8c44e0fbc22fe46b5 595 Pfam PF00990 Diguanylate cyclase, GGDEF domain 169 324 5.8E-34 T 11-10-2018 IPR000160 GGDEF domain VSVS12_01864 f2d2b4de63ecdfb8c44e0fbc22fe46b5 595 SUPERFAMILY SSF141868 344 590 7.32E-88 T 11-10-2018 IPR035919 EAL domain superfamily VSVS12_01864 f2d2b4de63ecdfb8c44e0fbc22fe46b5 595 SUPERFAMILY SSF55073 172 330 1.18E-33 T 11-10-2018 IPR029787 Nucleotide cyclase VSVS12_01864 f2d2b4de63ecdfb8c44e0fbc22fe46b5 595 Pfam PF00563 EAL domain 344 578 2.4E-71 T 11-10-2018 IPR001633 EAL domain VSVS12_01864 f2d2b4de63ecdfb8c44e0fbc22fe46b5 595 Gene3D G3DSA:3.30.70.270 163 342 1.8E-39 T 11-10-2018 VSVS12_01864 f2d2b4de63ecdfb8c44e0fbc22fe46b5 595 SMART SM00052 338 583 5.6E-103 T 11-10-2018 IPR001633 EAL domain VSVS12_01864 f2d2b4de63ecdfb8c44e0fbc22fe46b5 595 SMART SM00267 153 328 6.6E-28 T 11-10-2018 IPR000160 GGDEF domain VSVS12_04255 1fedf89c4fd674e7161b6663fc5f1dab 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 62 73 1.1E-16 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VSVS12_04255 1fedf89c4fd674e7161b6663fc5f1dab 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 118 135 1.1E-16 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VSVS12_04255 1fedf89c4fd674e7161b6663fc5f1dab 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 145 158 1.1E-16 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VSVS12_04255 1fedf89c4fd674e7161b6663fc5f1dab 388 Gene3D G3DSA:2.60.410.10 279 369 2.0E-26 T 11-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VSVS12_04255 1fedf89c4fd674e7161b6663fc5f1dab 388 SMART SM00936 279 369 6.0E-29 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VSVS12_04255 1fedf89c4fd674e7161b6663fc5f1dab 388 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 279 369 1.1E-18 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VSVS12_04255 1fedf89c4fd674e7161b6663fc5f1dab 388 Gene3D G3DSA:3.40.710.10 13 277 5.5E-90 T 11-10-2018 VSVS12_04255 1fedf89c4fd674e7161b6663fc5f1dab 388 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 30 259 4.0E-85 T 11-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 VSVS12_04255 1fedf89c4fd674e7161b6663fc5f1dab 388 SUPERFAMILY SSF56601 9 279 1.15E-82 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VSVS12_04255 1fedf89c4fd674e7161b6663fc5f1dab 388 SUPERFAMILY SSF69189 279 371 1.18E-22 T 11-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VSVS12_03623 733ee3af4db03d523063754ebef03d38 144 Gene3D G3DSA:2.20.28.140 1 37 1.6E-15 T 11-10-2018 VSVS12_03623 733ee3af4db03d523063754ebef03d38 144 SUPERFAMILY SSF52833 28 141 3.15E-35 T 11-10-2018 IPR036249 Thioredoxin-like superfamily VSVS12_03623 733ee3af4db03d523063754ebef03d38 144 Gene3D G3DSA:3.40.30.10 41 144 2.5E-31 T 11-10-2018 VSVS12_03623 733ee3af4db03d523063754ebef03d38 144 TIGRFAM TIGR01068 thioredoxin: thioredoxin 50 141 3.2E-34 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VSVS12_03623 733ee3af4db03d523063754ebef03d38 144 PRINTS PR00421 Thioredoxin family signature 58 66 1.9E-7 T 11-10-2018 VSVS12_03623 733ee3af4db03d523063754ebef03d38 144 PRINTS PR00421 Thioredoxin family signature 106 117 1.9E-7 T 11-10-2018 VSVS12_03623 733ee3af4db03d523063754ebef03d38 144 PRINTS PR00421 Thioredoxin family signature 66 75 1.9E-7 T 11-10-2018 VSVS12_03623 733ee3af4db03d523063754ebef03d38 144 PIRSF PIRSF000077 40 142 1.8E-31 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VSVS12_03623 733ee3af4db03d523063754ebef03d38 144 Pfam PF00085 Thioredoxin 50 140 9.2E-28 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 VSVS12_00158 efbb12cf5d5fc010d274140091e72312 370 Gene3D G3DSA:3.20.20.70 12 363 3.8E-104 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_00158 efbb12cf5d5fc010d274140091e72312 370 SUPERFAMILY SSF102114 37 361 1.96E-52 T 11-10-2018 VSVS12_00158 efbb12cf5d5fc010d274140091e72312 370 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 256 357 8.9E-24 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VSVS12_00158 efbb12cf5d5fc010d274140091e72312 370 Pfam PF04055 Radical SAM superfamily 81 222 2.8E-11 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VSVS12_00158 efbb12cf5d5fc010d274140091e72312 370 SMART SM00876 256 359 4.2E-35 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VSVS12_00158 efbb12cf5d5fc010d274140091e72312 370 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 3 366 3.1E-179 T 11-10-2018 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 VSVS12_02708 682948e435bcf12b09f6da5a558b1f65 387 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 118 179 1.8E-6 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VSVS12_02708 682948e435bcf12b09f6da5a558b1f65 387 Gene3D G3DSA:1.10.150.130 93 196 1.6E-15 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal VSVS12_02708 682948e435bcf12b09f6da5a558b1f65 387 Gene3D G3DSA:1.10.443.10 197 383 1.2E-27 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VSVS12_02708 682948e435bcf12b09f6da5a558b1f65 387 Pfam PF00589 Phage integrase family 200 362 1.5E-21 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VSVS12_02708 682948e435bcf12b09f6da5a558b1f65 387 SUPERFAMILY SSF56349 102 372 6.77E-52 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VSVS12_03935 d503f865443aba1b092922789945b3ec 106 Hamap MF_02200 Chaperone NapD [napD]. 6 82 18.586 T 11-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly VSVS12_03935 d503f865443aba1b092922789945b3ec 106 Gene3D G3DSA:3.30.70.920 6 75 5.4E-22 T 11-10-2018 VSVS12_03935 d503f865443aba1b092922789945b3ec 106 Pfam PF03927 NapD protein 6 80 1.3E-28 T 11-10-2018 IPR005623 Chaperone NapD, nitrate reductase assembly VSVS12_02441 839d3cb174efe89fc8cee9df71e50cce 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 7.3E-7 T 11-10-2018 VSVS12_02441 839d3cb174efe89fc8cee9df71e50cce 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 7.3E-7 T 11-10-2018 VSVS12_02441 839d3cb174efe89fc8cee9df71e50cce 517 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 7.3E-7 T 11-10-2018 VSVS12_02441 839d3cb174efe89fc8cee9df71e50cce 517 Pfam PF00117 Glutamine amidotransferase class-I 12 192 3.6E-42 T 11-10-2018 IPR017926 Glutamine amidotransferase VSVS12_02441 839d3cb174efe89fc8cee9df71e50cce 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 1.3E-7 T 11-10-2018 VSVS12_02441 839d3cb174efe89fc8cee9df71e50cce 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.3E-7 T 11-10-2018 VSVS12_02441 839d3cb174efe89fc8cee9df71e50cce 517 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.3E-7 T 11-10-2018 VSVS12_02441 839d3cb174efe89fc8cee9df71e50cce 517 Gene3D G3DSA:3.40.50.880 6 201 7.4E-56 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like VSVS12_02441 839d3cb174efe89fc8cee9df71e50cce 517 Gene3D G3DSA:3.40.50.620 202 397 8.3E-76 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VSVS12_02441 839d3cb174efe89fc8cee9df71e50cce 517 Pfam PF00958 GMP synthase C terminal domain 425 516 1.5E-43 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 VSVS12_02441 839d3cb174efe89fc8cee9df71e50cce 517 SUPERFAMILY SSF52402 189 412 8.16E-60 T 11-10-2018 VSVS12_02441 839d3cb174efe89fc8cee9df71e50cce 517 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 205 517 1.2E-156 T 11-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 VSVS12_02441 839d3cb174efe89fc8cee9df71e50cce 517 Gene3D G3DSA:3.30.300.10 398 517 6.6E-51 T 11-10-2018 VSVS12_02441 839d3cb174efe89fc8cee9df71e50cce 517 PRINTS PR00097 Anthranilate synthase component II signature 54 63 3.8E-6 T 11-10-2018 VSVS12_02441 839d3cb174efe89fc8cee9df71e50cce 517 PRINTS PR00097 Anthranilate synthase component II signature 81 92 3.8E-6 T 11-10-2018 VSVS12_02441 839d3cb174efe89fc8cee9df71e50cce 517 PRINTS PR00097 Anthranilate synthase component II signature 169 182 3.8E-6 T 11-10-2018 VSVS12_02441 839d3cb174efe89fc8cee9df71e50cce 517 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 197 2.0E-84 T 11-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 VSVS12_02441 839d3cb174efe89fc8cee9df71e50cce 517 SUPERFAMILY SSF54810 397 517 3.92E-51 T 11-10-2018 VSVS12_02441 839d3cb174efe89fc8cee9df71e50cce 517 SUPERFAMILY SSF52317 5 196 3.06E-58 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like VSVS12_02441 839d3cb174efe89fc8cee9df71e50cce 517 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 517 56.552 T 11-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 VSVS12_02441 839d3cb174efe89fc8cee9df71e50cce 517 Pfam PF02540 NAD synthase 212 285 2.3E-8 T 11-10-2018 IPR022310 NAD/GMP synthase VSVS12_01145 7ad1d25bfc3f3981aa71d6a3263f3c52 356 Gene3D G3DSA:3.40.350.10 7 124 4.0E-23 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VSVS12_01145 7ad1d25bfc3f3981aa71d6a3263f3c52 356 PRINTS PR00599 Methionine aminopeptidase-1 signature 204 220 1.3E-6 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 VSVS12_01145 7ad1d25bfc3f3981aa71d6a3263f3c52 356 PRINTS PR00599 Methionine aminopeptidase-1 signature 302 314 1.3E-6 T 11-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 VSVS12_01145 7ad1d25bfc3f3981aa71d6a3263f3c52 356 SUPERFAMILY SSF53092 11 124 1.74E-16 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VSVS12_01145 7ad1d25bfc3f3981aa71d6a3263f3c52 356 Pfam PF01321 Creatinase/Prolidase N-terminal domain 11 124 2.7E-18 T 11-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 VSVS12_01145 7ad1d25bfc3f3981aa71d6a3263f3c52 356 Pfam PF00557 Metallopeptidase family M24 133 334 8.6E-58 T 11-10-2018 IPR000994 Peptidase M24 VSVS12_01145 7ad1d25bfc3f3981aa71d6a3263f3c52 356 Gene3D G3DSA:3.90.230.10 125 350 1.7E-77 T 11-10-2018 VSVS12_01145 7ad1d25bfc3f3981aa71d6a3263f3c52 356 SUPERFAMILY SSF55920 125 350 1.44E-74 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like VSVS12_03405 c0185f14f677f55e0293a36207735777 368 Pfam PF13181 Tetratricopeptide repeat 116 141 8.6E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_03405 c0185f14f677f55e0293a36207735777 368 Gene3D G3DSA:1.25.40.10 247 362 3.9E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_03405 c0185f14f677f55e0293a36207735777 368 Gene3D G3DSA:1.25.40.10 98 246 9.1E-24 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_03405 c0185f14f677f55e0293a36207735777 368 SUPERFAMILY SSF48452 220 364 7.59E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_03405 c0185f14f677f55e0293a36207735777 368 SMART SM00028 177 210 36.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_03405 c0185f14f677f55e0293a36207735777 368 SMART SM00028 143 176 0.043 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_03405 c0185f14f677f55e0293a36207735777 368 SMART SM00028 245 278 110.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_03405 c0185f14f677f55e0293a36207735777 368 SMART SM00028 109 142 0.29 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_03405 c0185f14f677f55e0293a36207735777 368 SUPERFAMILY SSF48452 115 241 8.13E-20 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_01837 69e651f987efc43897bb9b52c53b1cda 456 TIGRFAM TIGR00797 matE: MATE efflux family protein 23 420 4.2E-61 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VSVS12_01837 69e651f987efc43897bb9b52c53b1cda 456 Pfam PF01554 MatE 250 412 2.3E-19 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VSVS12_01837 69e651f987efc43897bb9b52c53b1cda 456 Pfam PF01554 MatE 23 183 2.5E-21 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VSVS12_01837 69e651f987efc43897bb9b52c53b1cda 456 PIRSF PIRSF006603 4 456 2.3E-58 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VSVS12_02798 1eb38bc58179eeefe3ff9caa0e414fc1 365 Gene3D G3DSA:1.10.287.950 4 254 1.4E-41 T 11-10-2018 VSVS12_02798 1eb38bc58179eeefe3ff9caa0e414fc1 365 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 106 242 1.5E-30 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_02798 1eb38bc58179eeefe3ff9caa0e414fc1 365 SMART SM00283 32 254 1.0E-15 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_02798 1eb38bc58179eeefe3ff9caa0e414fc1 365 SUPERFAMILY SSF58104 54 245 1.7E-43 T 11-10-2018 VSVS12_02798 1eb38bc58179eeefe3ff9caa0e414fc1 365 Pfam PF13682 Chemoreceptor zinc-binding domain 257 322 1.4E-15 T 11-10-2018 IPR025991 Chemoreceptor zinc-binding domain VSVS12_01677 429e9e825b8a4fcc2c02baac30a0adc3 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 172 9.8E-91 T 11-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VSVS12_01677 429e9e825b8a4fcc2c02baac30a0adc3 172 SUPERFAMILY SSF54637 4 169 4.21E-56 T 11-10-2018 IPR029069 HotDog domain superfamily VSVS12_01677 429e9e825b8a4fcc2c02baac30a0adc3 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 50.87 T 11-10-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VSVS12_01677 429e9e825b8a4fcc2c02baac30a0adc3 172 Gene3D G3DSA:3.10.129.10 2 172 1.3E-64 T 11-10-2018 VSVS12_01677 429e9e825b8a4fcc2c02baac30a0adc3 172 Pfam PF07977 FabA-like domain 29 158 2.9E-54 T 11-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VSVS12_04216 15c4fb86a5fd494b13c118cf0c164971 5358 PRINTS PR00313 NodO calcium binding signature 5228 5236 2.4E-6 T 11-10-2018 VSVS12_04216 15c4fb86a5fd494b13c118cf0c164971 5358 PRINTS PR00313 NodO calcium binding signature 5237 5245 2.4E-6 T 11-10-2018 VSVS12_04216 15c4fb86a5fd494b13c118cf0c164971 5358 PRINTS PR00313 NodO calcium binding signature 5216 5227 2.4E-6 T 11-10-2018 VSVS12_04216 15c4fb86a5fd494b13c118cf0c164971 5358 PRINTS PR00313 NodO calcium binding signature 5246 5255 2.4E-6 T 11-10-2018 VSVS12_04216 15c4fb86a5fd494b13c118cf0c164971 5358 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1560 1698 8.4E-39 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain VSVS12_04216 15c4fb86a5fd494b13c118cf0c164971 5358 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2154 2293 1.3E-38 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain VSVS12_04216 15c4fb86a5fd494b13c118cf0c164971 5358 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2299 2445 1.8E-35 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain VSVS12_04216 15c4fb86a5fd494b13c118cf0c164971 5358 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1115 1261 1.3E-32 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain VSVS12_04216 15c4fb86a5fd494b13c118cf0c164971 5358 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 671 809 3.5E-39 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain VSVS12_04216 15c4fb86a5fd494b13c118cf0c164971 5358 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 966 1102 7.6E-38 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain VSVS12_04216 15c4fb86a5fd494b13c118cf0c164971 5358 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1265 1403 4.5E-39 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain VSVS12_04216 15c4fb86a5fd494b13c118cf0c164971 5358 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 371 514 1.8E-33 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain VSVS12_04216 15c4fb86a5fd494b13c118cf0c164971 5358 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2745 2887 9.0E-42 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain VSVS12_04216 15c4fb86a5fd494b13c118cf0c164971 5358 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1410 1556 1.4E-34 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain VSVS12_04216 15c4fb86a5fd494b13c118cf0c164971 5358 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 521 667 5.2E-34 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain VSVS12_04216 15c4fb86a5fd494b13c118cf0c164971 5358 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2449 2588 3.7E-36 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain VSVS12_04216 15c4fb86a5fd494b13c118cf0c164971 5358 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1705 1853 2.0E-37 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain VSVS12_04216 15c4fb86a5fd494b13c118cf0c164971 5358 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2596 2743 6.1E-36 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain VSVS12_04216 15c4fb86a5fd494b13c118cf0c164971 5358 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 1855 1991 5.3E-37 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain VSVS12_04216 15c4fb86a5fd494b13c118cf0c164971 5358 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2004 2150 6.4E-32 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain VSVS12_04216 15c4fb86a5fd494b13c118cf0c164971 5358 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 816 964 3.0E-37 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain VSVS12_04216 15c4fb86a5fd494b13c118cf0c164971 5358 TIGRFAM TIGR03660 T1SS_rpt_143: T1SS-143 repeat domain 2892 3026 8.6E-25 T 11-10-2018 IPR019959 T1SS-143 repeat-containing domain VSVS12_04216 15c4fb86a5fd494b13c118cf0c164971 5358 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 5215 5233 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VSVS12_04216 15c4fb86a5fd494b13c118cf0c164971 5358 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 5233 5251 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VSVS12_04216 15c4fb86a5fd494b13c118cf0c164971 5358 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 5224 5242 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VSVS12_04216 15c4fb86a5fd494b13c118cf0c164971 5358 Gene3D G3DSA:2.150.10.10 5194 5336 4.5E-26 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_04216 15c4fb86a5fd494b13c118cf0c164971 5358 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 5264 5353 9.9E-11 T 11-10-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass VSVS12_04216 15c4fb86a5fd494b13c118cf0c164971 5358 SUPERFAMILY SSF51120 5163 5282 1.44E-25 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_03818 8a682eeacc97e9d42c6e85115d771227 122 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 66 4.1E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VSVS12_03818 8a682eeacc97e9d42c6e85115d771227 122 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 1.4E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VSVS12_03818 8a682eeacc97e9d42c6e85115d771227 122 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 1.4E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VSVS12_03818 8a682eeacc97e9d42c6e85115d771227 122 Gene3D G3DSA:1.10.357.10 1 116 1.1E-21 T 11-10-2018 VSVS12_03818 8a682eeacc97e9d42c6e85115d771227 122 SUPERFAMILY SSF46689 8 88 2.21E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_01259 ae33aa2cf54933b4e5d312b16a42d08e 405 Gene3D G3DSA:1.10.10.10 2 81 8.0E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_01259 ae33aa2cf54933b4e5d312b16a42d08e 405 Gene3D G3DSA:3.30.420.40 208 377 6.9E-109 T 11-10-2018 VSVS12_01259 ae33aa2cf54933b4e5d312b16a42d08e 405 Gene3D G3DSA:3.30.420.40 91 387 6.9E-109 T 11-10-2018 VSVS12_01259 ae33aa2cf54933b4e5d312b16a42d08e 405 SUPERFAMILY SSF53067 86 393 1.63E-54 T 11-10-2018 VSVS12_01259 ae33aa2cf54933b4e5d312b16a42d08e 405 ProSitePatterns PS01125 ROK family signature. 218 245 - T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VSVS12_01259 ae33aa2cf54933b4e5d312b16a42d08e 405 Pfam PF00480 ROK family 88 389 7.2E-67 T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VSVS12_01259 ae33aa2cf54933b4e5d312b16a42d08e 405 SUPERFAMILY SSF46785 10 76 1.56E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_03968 1da784815c3197d918d555d15938c662 662 SUPERFAMILY SSF52540 33 585 6.47E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03968 1da784815c3197d918d555d15938c662 662 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 6 654 6.1E-248 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 VSVS12_03968 1da784815c3197d918d555d15938c662 662 Pfam PF12344 Ultra-violet resistance protein B 553 593 3.3E-17 T 11-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain VSVS12_03968 1da784815c3197d918d555d15938c662 662 Pfam PF00271 Helicase conserved C-terminal domain 442 546 1.5E-17 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_03968 1da784815c3197d918d555d15938c662 662 Gene3D G3DSA:3.40.50.300 416 597 5.4E-47 T 11-10-2018 VSVS12_03968 1da784815c3197d918d555d15938c662 662 SMART SM00487 10 427 1.2E-22 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VSVS12_03968 1da784815c3197d918d555d15938c662 662 Gene3D G3DSA:3.40.50.300 1 161 1.7E-68 T 11-10-2018 VSVS12_03968 1da784815c3197d918d555d15938c662 662 Gene3D G3DSA:3.40.50.300 274 415 1.1E-42 T 11-10-2018 VSVS12_03968 1da784815c3197d918d555d15938c662 662 SMART SM00490 461 547 1.1E-20 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_03968 1da784815c3197d918d555d15938c662 662 Pfam PF04851 Type III restriction enzyme, res subunit 17 88 2.9E-9 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VSVS12_03968 1da784815c3197d918d555d15938c662 662 Gene3D G3DSA:3.30.2060.10 162 246 5.2E-9 T 11-10-2018 VSVS12_03968 1da784815c3197d918d555d15938c662 662 SUPERFAMILY SSF52540 5 416 1.49E-104 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03035 04aff7ab87904583ce3afac5ba2940dc 477 Gene3D G3DSA:2.40.50.100 69 103 7.5E-10 T 11-10-2018 VSVS12_03035 04aff7ab87904583ce3afac5ba2940dc 477 Gene3D G3DSA:2.40.30.170 58 68 7.5E-10 T 11-10-2018 VSVS12_03035 04aff7ab87904583ce3afac5ba2940dc 477 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 31 445 8.3E-127 T 11-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 VSVS12_03035 04aff7ab87904583ce3afac5ba2940dc 477 SUPERFAMILY SSF111369 63 123 7.06E-6 T 11-10-2018 VSVS12_03035 04aff7ab87904583ce3afac5ba2940dc 477 Pfam PF13437 HlyD family secretion protein 316 428 1.5E-17 T 11-10-2018 VSVS12_03035 04aff7ab87904583ce3afac5ba2940dc 477 Gene3D G3DSA:1.10.287.470 104 183 7.5E-10 T 11-10-2018 VSVS12_03035 04aff7ab87904583ce3afac5ba2940dc 477 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 386 409 7.8E-40 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VSVS12_03035 04aff7ab87904583ce3afac5ba2940dc 477 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 362 386 7.8E-40 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VSVS12_03035 04aff7ab87904583ce3afac5ba2940dc 477 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 82 102 7.8E-40 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VSVS12_03035 04aff7ab87904583ce3afac5ba2940dc 477 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 40 63 7.8E-40 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VSVS12_03035 04aff7ab87904583ce3afac5ba2940dc 477 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 428 443 7.8E-40 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VSVS12_03035 04aff7ab87904583ce3afac5ba2940dc 477 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 329 350 7.8E-40 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VSVS12_03035 04aff7ab87904583ce3afac5ba2940dc 477 Pfam PF13533 Biotin-lipoyl like 70 108 1.9E-6 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VSVS12_00301 3dce96bb198518a48711fcbae8bfba1e 239 SUPERFAMILY SSF46894 132 234 7.37E-27 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VSVS12_00301 3dce96bb198518a48711fcbae8bfba1e 239 SUPERFAMILY SSF52172 6 126 5.98E-42 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_00301 3dce96bb198518a48711fcbae8bfba1e 239 Pfam PF00072 Response regulator receiver domain 7 117 5.4E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_00301 3dce96bb198518a48711fcbae8bfba1e 239 SMART SM00862 156 232 3.4E-21 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VSVS12_00301 3dce96bb198518a48711fcbae8bfba1e 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 7.7E-22 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VSVS12_00301 3dce96bb198518a48711fcbae8bfba1e 239 Gene3D G3DSA:1.10.10.10 130 239 8.8E-38 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_00301 3dce96bb198518a48711fcbae8bfba1e 239 SMART SM00448 5 116 3.4E-45 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_00301 3dce96bb198518a48711fcbae8bfba1e 239 Gene3D G3DSA:3.40.50.2300 1 125 4.5E-40 T 11-10-2018 VSVS12_02435 464b735d3417e8937d353271748b44bc 503 Pfam PF02378 Phosphotransferase system, EIIC 16 334 2.0E-78 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VSVS12_02435 464b735d3417e8937d353271748b44bc 503 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 434 451 - T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VSVS12_02435 464b735d3417e8937d353271748b44bc 503 Pfam PF00367 phosphotransferase system, EIIB 424 456 7.4E-12 T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VSVS12_02435 464b735d3417e8937d353271748b44bc 503 Gene3D G3DSA:3.30.1360.60 417 493 5.5E-23 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VSVS12_02435 464b735d3417e8937d353271748b44bc 503 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 397 481 4.1E-16 T 11-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VSVS12_02435 464b735d3417e8937d353271748b44bc 503 SUPERFAMILY SSF55604 421 492 4.97E-18 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VSVS12_02586 761a47027e412bde5c9c63fc1ff7fd7f 455 Gene3D G3DSA:2.30.42.10 265 369 7.4E-30 T 11-10-2018 VSVS12_02586 761a47027e412bde5c9c63fc1ff7fd7f 455 SUPERFAMILY SSF50494 19 276 4.83E-64 T 11-10-2018 IPR009003 Peptidase S1, PA clan VSVS12_02586 761a47027e412bde5c9c63fc1ff7fd7f 455 Gene3D G3DSA:2.40.10.120 37 261 2.8E-85 T 11-10-2018 VSVS12_02586 761a47027e412bde5c9c63fc1ff7fd7f 455 Pfam PF13365 Trypsin-like peptidase domain 92 228 4.3E-31 T 11-10-2018 VSVS12_02586 761a47027e412bde5c9c63fc1ff7fd7f 455 Pfam PF13180 PDZ domain 268 358 8.7E-17 T 11-10-2018 IPR001478 PDZ domain GO:0005515 VSVS12_02586 761a47027e412bde5c9c63fc1ff7fd7f 455 SMART SM00228 267 349 8.5E-14 T 11-10-2018 IPR001478 PDZ domain GO:0005515 VSVS12_02586 761a47027e412bde5c9c63fc1ff7fd7f 455 SMART SM00228 374 447 5.8E-9 T 11-10-2018 IPR001478 PDZ domain GO:0005515 VSVS12_02586 761a47027e412bde5c9c63fc1ff7fd7f 455 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 39 453 3.2E-164 T 11-10-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 VSVS12_02586 761a47027e412bde5c9c63fc1ff7fd7f 455 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 373 444 2.8E-9 T 11-10-2018 IPR001478 PDZ domain GO:0005515 VSVS12_02586 761a47027e412bde5c9c63fc1ff7fd7f 455 SUPERFAMILY SSF50156 249 358 4.26E-24 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 VSVS12_02586 761a47027e412bde5c9c63fc1ff7fd7f 455 SUPERFAMILY SSF50156 384 454 1.97E-15 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 VSVS12_02586 761a47027e412bde5c9c63fc1ff7fd7f 455 Gene3D G3DSA:2.30.42.10 370 455 1.4E-23 T 11-10-2018 VSVS12_02586 761a47027e412bde5c9c63fc1ff7fd7f 455 PRINTS PR00834 HtrA/DegQ protease family signature 307 319 1.3E-56 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VSVS12_02586 761a47027e412bde5c9c63fc1ff7fd7f 455 PRINTS PR00834 HtrA/DegQ protease family signature 164 188 1.3E-56 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VSVS12_02586 761a47027e412bde5c9c63fc1ff7fd7f 455 PRINTS PR00834 HtrA/DegQ protease family signature 199 216 1.3E-56 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VSVS12_02586 761a47027e412bde5c9c63fc1ff7fd7f 455 PRINTS PR00834 HtrA/DegQ protease family signature 102 114 1.3E-56 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VSVS12_02586 761a47027e412bde5c9c63fc1ff7fd7f 455 PRINTS PR00834 HtrA/DegQ protease family signature 123 143 1.3E-56 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VSVS12_02586 761a47027e412bde5c9c63fc1ff7fd7f 455 PRINTS PR00834 HtrA/DegQ protease family signature 221 238 1.3E-56 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VSVS12_00816 2cdef89a6eccd5cbf9d3fa9a995bc244 403 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 4 403 6.4E-149 T 11-10-2018 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 VSVS12_00816 2cdef89a6eccd5cbf9d3fa9a995bc244 403 SUPERFAMILY SSF53383 3 400 7.98E-122 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VSVS12_00816 2cdef89a6eccd5cbf9d3fa9a995bc244 403 PIRSF PIRSF005572 21 403 1.0E-50 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 VSVS12_00816 2cdef89a6eccd5cbf9d3fa9a995bc244 403 Gene3D G3DSA:3.90.1150.10 7 396 1.1E-159 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VSVS12_00816 2cdef89a6eccd5cbf9d3fa9a995bc244 403 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 5 401 3.3E-163 T 11-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 VSVS12_00816 2cdef89a6eccd5cbf9d3fa9a995bc244 403 Pfam PF00266 Aminotransferase class-V 24 392 3.0E-145 T 11-10-2018 IPR000192 Aminotransferase class V domain VSVS12_00816 2cdef89a6eccd5cbf9d3fa9a995bc244 403 Gene3D G3DSA:3.40.640.10 35 295 1.1E-159 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VSVS12_01798 8248925094b3172289a590b925f5cb4e 305 SUPERFAMILY SSF161098 72 293 1.24E-41 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_01798 8248925094b3172289a590b925f5cb4e 305 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 71 140 5.3E-15 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VSVS12_01798 8248925094b3172289a590b925f5cb4e 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 302 3.3E-20 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VSVS12_01798 8248925094b3172289a590b925f5cb4e 305 Gene3D G3DSA:1.10.3720.10 66 304 2.4E-52 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_03418 56716253547930fd5d6cc992400befe1 478 Gene3D G3DSA:3.40.309.10 229 428 3.7E-143 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VSVS12_03418 56716253547930fd5d6cc992400befe1 478 SUPERFAMILY SSF53720 15 449 3.53E-112 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VSVS12_03418 56716253547930fd5d6cc992400befe1 478 PIRSF PIRSF036492 8 478 2.1E-150 T 11-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 VSVS12_03418 56716253547930fd5d6cc992400befe1 478 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 225 232 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VSVS12_03418 56716253547930fd5d6cc992400befe1 478 Pfam PF00171 Aldehyde dehydrogenase family 17 448 1.3E-85 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VSVS12_03418 56716253547930fd5d6cc992400befe1 478 Gene3D G3DSA:3.40.605.10 32 448 3.7E-143 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VSVS12_02479 249c2913d0294382ba6b378721797cd5 229 Gene3D G3DSA:3.40.50.2300 1 126 9.5E-39 T 11-10-2018 VSVS12_02479 249c2913d0294382ba6b378721797cd5 229 Gene3D G3DSA:1.10.10.10 127 228 4.8E-40 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_02479 249c2913d0294382ba6b378721797cd5 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 3.3E-113 T 11-10-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 VSVS12_02479 249c2913d0294382ba6b378721797cd5 229 SMART SM00448 3 116 1.9E-45 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_02479 249c2913d0294382ba6b378721797cd5 229 SMART SM00862 150 225 8.5E-27 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VSVS12_02479 249c2913d0294382ba6b378721797cd5 229 Pfam PF00072 Response regulator receiver domain 5 116 1.2E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_02479 249c2913d0294382ba6b378721797cd5 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 5.8E-28 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VSVS12_02479 249c2913d0294382ba6b378721797cd5 229 SUPERFAMILY SSF52172 3 184 4.53E-43 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_00668 d1cbb70deae10b5fba62979c989aa9d9 629 SUPERFAMILY SSF51230 204 295 2.62E-22 T 11-10-2018 IPR011053 Single hybrid motif VSVS12_00668 d1cbb70deae10b5fba62979c989aa9d9 629 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 398 628 1.4E-78 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 VSVS12_00668 d1cbb70deae10b5fba62979c989aa9d9 629 SUPERFAMILY SSF47005 316 361 1.31E-12 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 VSVS12_00668 d1cbb70deae10b5fba62979c989aa9d9 629 SUPERFAMILY SSF52777 387 628 1.69E-80 T 11-10-2018 VSVS12_00668 d1cbb70deae10b5fba62979c989aa9d9 629 Gene3D G3DSA:2.40.50.100 104 180 7.6E-20 T 11-10-2018 VSVS12_00668 d1cbb70deae10b5fba62979c989aa9d9 629 Gene3D G3DSA:2.40.50.100 204 281 4.8E-20 T 11-10-2018 VSVS12_00668 d1cbb70deae10b5fba62979c989aa9d9 629 Gene3D G3DSA:2.40.50.100 1 80 6.7E-21 T 11-10-2018 VSVS12_00668 d1cbb70deae10b5fba62979c989aa9d9 629 SUPERFAMILY SSF51230 104 192 4.58E-21 T 11-10-2018 IPR011053 Single hybrid motif VSVS12_00668 d1cbb70deae10b5fba62979c989aa9d9 629 Gene3D G3DSA:3.30.559.10 382 629 8.2E-96 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VSVS12_00668 d1cbb70deae10b5fba62979c989aa9d9 629 Pfam PF00364 Biotin-requiring enzyme 206 275 4.2E-21 T 11-10-2018 IPR000089 Biotin/lipoyl attachment VSVS12_00668 d1cbb70deae10b5fba62979c989aa9d9 629 Pfam PF00364 Biotin-requiring enzyme 105 175 4.6E-20 T 11-10-2018 IPR000089 Biotin/lipoyl attachment VSVS12_00668 d1cbb70deae10b5fba62979c989aa9d9 629 Pfam PF00364 Biotin-requiring enzyme 4 73 2.5E-20 T 11-10-2018 IPR000089 Biotin/lipoyl attachment VSVS12_00668 d1cbb70deae10b5fba62979c989aa9d9 629 Gene3D G3DSA:4.10.320.10 322 367 2.2E-20 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 VSVS12_00668 d1cbb70deae10b5fba62979c989aa9d9 629 Pfam PF02817 e3 binding domain 323 357 3.3E-14 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 VSVS12_00668 d1cbb70deae10b5fba62979c989aa9d9 629 SUPERFAMILY SSF51230 1 91 1.33E-22 T 11-10-2018 IPR011053 Single hybrid motif VSVS12_00668 d1cbb70deae10b5fba62979c989aa9d9 629 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 VSVS12_00668 d1cbb70deae10b5fba62979c989aa9d9 629 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 227 256 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 VSVS12_00668 d1cbb70deae10b5fba62979c989aa9d9 629 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 127 156 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 VSVS12_00668 d1cbb70deae10b5fba62979c989aa9d9 629 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 196 629 2.8E-203 T 11-10-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 VSVS12_04530 17dec6673ae6b57e25124d6948daad07 80 Pfam PF03553 Na+/H+ antiporter family 1 74 1.4E-9 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VSVS12_00132 3364e0f3c3e9d947c1cde9aaba2b760a 203 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 11-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VSVS12_00132 3364e0f3c3e9d947c1cde9aaba2b760a 203 Pfam PF01081 KDPG and KHG aldolase 5 197 2.2E-72 T 11-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VSVS12_00132 3364e0f3c3e9d947c1cde9aaba2b760a 203 SUPERFAMILY SSF51569 3 201 4.03E-66 T 11-10-2018 VSVS12_00132 3364e0f3c3e9d947c1cde9aaba2b760a 203 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 5 201 4.7E-82 T 11-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VSVS12_00132 3364e0f3c3e9d947c1cde9aaba2b760a 203 Gene3D G3DSA:3.20.20.70 1 203 4.0E-73 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_00132 3364e0f3c3e9d947c1cde9aaba2b760a 203 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 124 137 - T 11-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VSVS12_01558 a3b38d5f7f4e94c5a547e87de23112e5 142 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 109 7.9E-7 T 11-10-2018 VSVS12_01558 a3b38d5f7f4e94c5a547e87de23112e5 142 Gene3D G3DSA:3.10.180.10 3 140 2.4E-13 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VSVS12_01558 a3b38d5f7f4e94c5a547e87de23112e5 142 SUPERFAMILY SSF54593 4 130 8.88E-17 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VSVS12_03904 94f33d9da1216ca9cdd001bf3d5f78e3 318 Gene3D G3DSA:1.10.150.130 26 128 3.3E-18 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal VSVS12_03904 94f33d9da1216ca9cdd001bf3d5f78e3 318 SUPERFAMILY SSF56349 132 307 1.09E-25 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VSVS12_03904 94f33d9da1216ca9cdd001bf3d5f78e3 318 Pfam PF00589 Phage integrase family 141 298 5.0E-10 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VSVS12_03904 94f33d9da1216ca9cdd001bf3d5f78e3 318 SUPERFAMILY SSF47823 34 124 1.45E-18 T 11-10-2018 VSVS12_03904 94f33d9da1216ca9cdd001bf3d5f78e3 318 Gene3D G3DSA:1.10.443.10 129 301 7.8E-28 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VSVS12_00343 76206f4e00c35a25664281a696ecb171 387 Gene3D G3DSA:3.40.640.10 1 259 2.7E-87 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VSVS12_00343 76206f4e00c35a25664281a696ecb171 387 PIRSF PIRSF000390 1 387 9.3E-108 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VSVS12_00343 76206f4e00c35a25664281a696ecb171 387 Gene3D G3DSA:3.90.1150.10 260 386 1.8E-35 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VSVS12_00343 76206f4e00c35a25664281a696ecb171 387 TIGRFAM TIGR03588 PseC: UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase 1 384 3.3E-171 T 11-10-2018 IPR020026 UDP-4-amino-4,6-dideoxy-N-acetyl-beta-L-altrosamine transaminase VSVS12_00343 76206f4e00c35a25664281a696ecb171 387 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 10 379 4.7E-110 T 11-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase VSVS12_00343 76206f4e00c35a25664281a696ecb171 387 SUPERFAMILY SSF53383 2 385 4.9E-112 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VSVS12_03301 7febd126ff67db6cbbf11e232979cacc 283 SUPERFAMILY SSF56796 6 280 7.33E-64 T 11-10-2018 VSVS12_03301 7febd126ff67db6cbbf11e232979cacc 283 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 274 4.3E-57 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VSVS12_03301 7febd126ff67db6cbbf11e232979cacc 283 Gene3D G3DSA:3.40.50.1970 4 80 5.4E-18 T 11-10-2018 VSVS12_03301 7febd126ff67db6cbbf11e232979cacc 283 Gene3D G3DSA:1.20.1090.10 81 282 4.5E-41 T 11-10-2018 VSVS12_03301 7febd126ff67db6cbbf11e232979cacc 283 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 160 180 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VSVS12_01246 8777edfcaf9312c98c9815df21f27b88 210 Gene3D G3DSA:3.40.50.300 4 209 2.2E-63 T 11-10-2018 VSVS12_01246 8777edfcaf9312c98c9815df21f27b88 210 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 199 2.5E-61 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 VSVS12_01246 8777edfcaf9312c98c9815df21f27b88 210 Hamap MF_00165 Thymidylate kinase [tmk]. 5 207 27.395 T 11-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 VSVS12_01246 8777edfcaf9312c98c9815df21f27b88 210 SUPERFAMILY SSF52540 1 208 3.0E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01246 8777edfcaf9312c98c9815df21f27b88 210 ProSitePatterns PS01331 Thymidylate kinase signature. 96 108 - T 11-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 VSVS12_01246 8777edfcaf9312c98c9815df21f27b88 210 Pfam PF02223 Thymidylate kinase 9 199 4.2E-55 T 11-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 VSVS12_02105 dd278b0131193b0571c42aa85f75f698 419 Pfam PF00512 His Kinase A (phospho-acceptor) domain 226 287 4.5E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_02105 dd278b0131193b0571c42aa85f75f698 419 SUPERFAMILY SSF47384 207 289 1.96E-14 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VSVS12_02105 dd278b0131193b0571c42aa85f75f698 419 Gene3D G3DSA:1.10.287.130 175 290 1.2E-16 T 11-10-2018 VSVS12_02105 dd278b0131193b0571c42aa85f75f698 419 SMART SM00387 333 409 2.7E-6 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_02105 dd278b0131193b0571c42aa85f75f698 419 SUPERFAMILY SSF55874 279 419 1.7E-18 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_02105 dd278b0131193b0571c42aa85f75f698 419 SMART SM00388 224 289 1.8E-12 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_02105 dd278b0131193b0571c42aa85f75f698 419 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 338 418 2.9E-8 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_02105 dd278b0131193b0571c42aa85f75f698 419 Gene3D G3DSA:3.30.565.10 299 419 2.8E-14 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_02135 b7961c07bb808c54ad9f957c64a3e169 806 Gene3D G3DSA:3.30.450.20 30 204 3.7E-17 T 11-10-2018 VSVS12_02135 b7961c07bb808c54ad9f957c64a3e169 806 SMART SM00387 464 579 6.5E-34 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_02135 b7961c07bb808c54ad9f957c64a3e169 806 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 465 577 5.6E-27 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_02135 b7961c07bb808c54ad9f957c64a3e169 806 PRINTS PR00344 Bacterial sensor protein C-terminal signature 563 576 4.9E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_02135 b7961c07bb808c54ad9f957c64a3e169 806 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 518 4.9E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_02135 b7961c07bb808c54ad9f957c64a3e169 806 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 532 4.9E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_02135 b7961c07bb808c54ad9f957c64a3e169 806 PRINTS PR00344 Bacterial sensor protein C-terminal signature 539 557 4.9E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_02135 b7961c07bb808c54ad9f957c64a3e169 806 Pfam PF00512 His Kinase A (phospho-acceptor) domain 352 417 2.5E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_02135 b7961c07bb808c54ad9f957c64a3e169 806 Pfam PF00072 Response regulator receiver domain 601 712 6.5E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_02135 b7961c07bb808c54ad9f957c64a3e169 806 Gene3D G3DSA:1.10.287.130 319 415 4.9E-27 T 11-10-2018 VSVS12_02135 b7961c07bb808c54ad9f957c64a3e169 806 SUPERFAMILY SSF47384 338 418 3.92E-20 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VSVS12_02135 b7961c07bb808c54ad9f957c64a3e169 806 SMART SM00388 352 417 1.2E-24 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_02135 b7961c07bb808c54ad9f957c64a3e169 806 SUPERFAMILY SSF52172 596 739 1.29E-30 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_02135 b7961c07bb808c54ad9f957c64a3e169 806 Gene3D G3DSA:3.40.50.2300 587 721 1.3E-32 T 11-10-2018 VSVS12_02135 b7961c07bb808c54ad9f957c64a3e169 806 Gene3D G3DSA:3.30.565.10 416 581 9.4E-45 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_02135 b7961c07bb808c54ad9f957c64a3e169 806 SUPERFAMILY SSF55874 406 576 2.23E-42 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_02135 b7961c07bb808c54ad9f957c64a3e169 806 SMART SM00448 598 712 1.3E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_02593 222c84de2e649fe6c769afb9048c72e0 210 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 15 198 3.4E-62 T 11-10-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 VSVS12_02593 222c84de2e649fe6c769afb9048c72e0 210 Pfam PF00293 NUDIX domain 58 175 2.4E-11 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VSVS12_02593 222c84de2e649fe6c769afb9048c72e0 210 SUPERFAMILY SSF55811 3 206 2.57E-47 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VSVS12_02593 222c84de2e649fe6c769afb9048c72e0 210 ProSitePatterns PS00893 Nudix box signature. 96 117 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VSVS12_02593 222c84de2e649fe6c769afb9048c72e0 210 Gene3D G3DSA:3.90.79.10 1 208 9.1E-65 T 11-10-2018 VSVS12_01158 f4f5b4c8822b8ec1ff912f24024ba518 253 Gene3D G3DSA:3.40.50.720 1 252 6.6E-81 T 11-10-2018 VSVS12_01158 f4f5b4c8822b8ec1ff912f24024ba518 253 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 6 253 2.5E-132 T 11-10-2018 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.127|MetaCyc: PWY-6507|MetaCyc: PWY-7562 VSVS12_01158 f4f5b4c8822b8ec1ff912f24024ba518 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 1.5E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01158 f4f5b4c8822b8ec1ff912f24024ba518 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.5E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01158 f4f5b4c8822b8ec1ff912f24024ba518 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.5E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01158 f4f5b4c8822b8ec1ff912f24024ba518 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.5E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01158 f4f5b4c8822b8ec1ff912f24024ba518 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.5E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01158 f4f5b4c8822b8ec1ff912f24024ba518 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.5E-40 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01158 f4f5b4c8822b8ec1ff912f24024ba518 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VSVS12_01158 f4f5b4c8822b8ec1ff912f24024ba518 253 SUPERFAMILY SSF51735 9 251 3.48E-76 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_01158 f4f5b4c8822b8ec1ff912f24024ba518 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 4.6E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01158 f4f5b4c8822b8ec1ff912f24024ba518 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 4.6E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01158 f4f5b4c8822b8ec1ff912f24024ba518 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 4.6E-13 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01158 f4f5b4c8822b8ec1ff912f24024ba518 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 250 1.5E-58 T 11-10-2018 VSVS12_00182 125ee144307122037c6c5d1fde15af9f 293 Pfam PF03466 LysR substrate binding domain 81 280 1.9E-24 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_00182 125ee144307122037c6c5d1fde15af9f 293 Gene3D G3DSA:1.10.10.10 1 86 7.6E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_00182 125ee144307122037c6c5d1fde15af9f 293 SUPERFAMILY SSF53850 81 283 7.47E-26 T 11-10-2018 VSVS12_00182 125ee144307122037c6c5d1fde15af9f 293 SUPERFAMILY SSF46785 2 79 2.07E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_00182 125ee144307122037c6c5d1fde15af9f 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 55 4.3E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_00182 125ee144307122037c6c5d1fde15af9f 293 Gene3D G3DSA:3.40.190.290 87 291 1.2E-15 T 11-10-2018 VSVS12_02792 bfd4efeb1a4b9b255c8534de32986dcf 587 SUPERFAMILY SSF56731 121 433 2.7E-113 T 11-10-2018 VSVS12_02792 bfd4efeb1a4b9b255c8534de32986dcf 587 SMART SM00766 457 582 2.3E-53 T 11-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 VSVS12_02792 bfd4efeb1a4b9b255c8534de32986dcf 587 Hamap MF_00974 DNA primase [dnaG]. 4 583 29.818 T 11-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 VSVS12_02792 bfd4efeb1a4b9b255c8534de32986dcf 587 Pfam PF08275 DNA primase catalytic core, N-terminal domain 132 256 8.5E-43 T 11-10-2018 IPR013264 DNA primase, catalytic core, N-terminal VSVS12_02792 bfd4efeb1a4b9b255c8534de32986dcf 587 PIRSF PIRSF002811 2 586 9.4E-144 T 11-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 VSVS12_02792 bfd4efeb1a4b9b255c8534de32986dcf 587 Gene3D G3DSA:1.20.50.20 374 432 4.0E-23 T 11-10-2018 VSVS12_02792 bfd4efeb1a4b9b255c8534de32986dcf 587 Gene3D G3DSA:3.90.580.10 1 102 5.3E-40 T 11-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 VSVS12_02792 bfd4efeb1a4b9b255c8534de32986dcf 587 Pfam PF10410 DnaB-helicase binding domain of primase 375 429 1.4E-9 T 11-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 VSVS12_02792 bfd4efeb1a4b9b255c8534de32986dcf 587 SMART SM00400 36 90 2.3E-37 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 VSVS12_02792 bfd4efeb1a4b9b255c8534de32986dcf 587 Pfam PF08278 DNA primase DnaG DnaB-binding 458 581 3.8E-36 T 11-10-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 VSVS12_02792 bfd4efeb1a4b9b255c8534de32986dcf 587 Pfam PF13155 Toprim-like 269 356 3.4E-13 T 11-10-2018 VSVS12_02792 bfd4efeb1a4b9b255c8534de32986dcf 587 Gene3D G3DSA:1.10.860.10 445 587 1.6E-56 T 11-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal VSVS12_02792 bfd4efeb1a4b9b255c8534de32986dcf 587 SMART SM00493 265 336 9.2E-18 T 11-10-2018 IPR006171 TOPRIM domain VSVS12_02792 bfd4efeb1a4b9b255c8534de32986dcf 587 SUPERFAMILY SSF117023 454 585 8.76E-44 T 11-10-2018 VSVS12_02792 bfd4efeb1a4b9b255c8534de32986dcf 587 TIGRFAM TIGR01391 dnaG: DNA primase 5 423 1.7E-147 T 11-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 VSVS12_02792 bfd4efeb1a4b9b255c8534de32986dcf 587 Pfam PF01807 CHC2 zinc finger 6 101 1.1E-41 T 11-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 VSVS12_02792 bfd4efeb1a4b9b255c8534de32986dcf 587 Gene3D G3DSA:3.40.1360.10 247 373 1.5E-41 T 11-10-2018 VSVS12_02792 bfd4efeb1a4b9b255c8534de32986dcf 587 SUPERFAMILY SSF57783 4 101 2.55E-38 T 11-10-2018 VSVS12_02792 bfd4efeb1a4b9b255c8534de32986dcf 587 Gene3D G3DSA:3.90.980.10 121 246 2.3E-45 T 11-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily VSVS12_01209 7aedcf7ee2162f97b7d9848d2f6a39f2 189 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 29 7.6E-11 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_01209 7aedcf7ee2162f97b7d9848d2f6a39f2 189 SUPERFAMILY SSF54523 9 87 2.2E-17 T 11-10-2018 VSVS12_01209 7aedcf7ee2162f97b7d9848d2f6a39f2 189 Gene3D G3DSA:3.30.700.10 9 188 6.9E-16 T 11-10-2018 VSVS12_01209 7aedcf7ee2162f97b7d9848d2f6a39f2 189 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 29 2.6E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_01209 7aedcf7ee2162f97b7d9848d2f6a39f2 189 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 7 27 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_02633 039d1f2742c6ee8d6be20f0d5ca63d7a 226 TIGRFAM TIGR00153 TIGR00153: TIGR00153 family protein 4 225 2.4E-67 T 11-10-2018 IPR002727 Protein of unknown function DUF47 VSVS12_02633 039d1f2742c6ee8d6be20f0d5ca63d7a 226 Pfam PF01865 Protein of unknown function DUF47 7 223 2.1E-65 T 11-10-2018 IPR018445 Putative phosphate transport regulator VSVS12_02633 039d1f2742c6ee8d6be20f0d5ca63d7a 226 SUPERFAMILY SSF109755 28 216 4.19E-15 T 11-10-2018 VSVS12_02633 039d1f2742c6ee8d6be20f0d5ca63d7a 226 Gene3D G3DSA:1.20.58.220 1 225 3.8E-64 T 11-10-2018 IPR038078 PhoU-like domain superfamily VSVS12_00179 17ea5aac27695a6c4b57b5a157287959 207 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 5 201 3.7E-69 T 11-10-2018 IPR015796 Impact family, bacterial/archaeal VSVS12_00179 17ea5aac27695a6c4b57b5a157287959 207 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 82 111 - T 11-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site VSVS12_00179 17ea5aac27695a6c4b57b5a157287959 207 Gene3D G3DSA:3.30.230.30 1 136 7.1E-49 T 11-10-2018 IPR036956 Impact, N-terminal domain superfamily VSVS12_00179 17ea5aac27695a6c4b57b5a157287959 207 Pfam PF09186 Domain of unknown function (DUF1949) 143 196 1.1E-12 T 11-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal VSVS12_00179 17ea5aac27695a6c4b57b5a157287959 207 SUPERFAMILY SSF54211 4 134 3.75E-43 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VSVS12_00179 17ea5aac27695a6c4b57b5a157287959 207 Pfam PF01205 Uncharacterized protein family UPF0029 20 127 6.3E-26 T 11-10-2018 IPR001498 Impact, N-terminal VSVS12_00179 17ea5aac27695a6c4b57b5a157287959 207 SUPERFAMILY SSF54980 138 204 7.91E-11 T 11-10-2018 IPR035647 EF-G domain III/V-like VSVS12_00123 7d77f3b350ae8b9e174862bae6c5e912 253 PIRSF PIRSF005902 1 253 3.9E-71 T 11-10-2018 IPR001130 TatD family GO:0016788 VSVS12_00123 7d77f3b350ae8b9e174862bae6c5e912 253 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 1 252 4.9E-72 T 11-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 VSVS12_00123 7d77f3b350ae8b9e174862bae6c5e912 253 SUPERFAMILY SSF51556 1 253 6.08E-79 T 11-10-2018 IPR032466 Metal-dependent hydrolase VSVS12_00123 7d77f3b350ae8b9e174862bae6c5e912 253 Pfam PF01026 TatD related DNase 2 252 5.6E-65 T 11-10-2018 IPR001130 TatD family GO:0016788 VSVS12_00123 7d77f3b350ae8b9e174862bae6c5e912 253 Gene3D G3DSA:3.20.20.140 1 253 4.3E-79 T 11-10-2018 VSVS12_00184 115e44a15caab7749e61d0016c3e3e22 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 392 426 4.0E-7 T 11-10-2018 IPR001451 Hexapeptide repeat VSVS12_00184 115e44a15caab7749e61d0016c3e3e22 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 314 348 5.1E-5 T 11-10-2018 IPR001451 Hexapeptide repeat VSVS12_00184 115e44a15caab7749e61d0016c3e3e22 453 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 266 296 2.0E-5 T 11-10-2018 IPR001451 Hexapeptide repeat VSVS12_00184 115e44a15caab7749e61d0016c3e3e22 453 Gene3D G3DSA:3.90.550.10 1 224 1.4E-66 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VSVS12_00184 115e44a15caab7749e61d0016c3e3e22 453 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 4 452 9.1E-203 T 11-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 VSVS12_00184 115e44a15caab7749e61d0016c3e3e22 453 Gene3D G3DSA:2.160.10.10 225 453 8.5E-71 T 11-10-2018 VSVS12_00184 115e44a15caab7749e61d0016c3e3e22 453 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 400 428 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VSVS12_00184 115e44a15caab7749e61d0016c3e3e22 453 Pfam PF12804 MobA-like NTP transferase domain 5 122 1.2E-21 T 11-10-2018 IPR025877 MobA-like NTP transferase VSVS12_00184 115e44a15caab7749e61d0016c3e3e22 453 SUPERFAMILY SSF53448 1 249 2.09E-63 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VSVS12_00184 115e44a15caab7749e61d0016c3e3e22 453 SUPERFAMILY SSF51161 252 434 2.27E-51 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily VSVS12_00184 115e44a15caab7749e61d0016c3e3e22 453 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 2 449 42.326 T 11-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 VSVS12_00660 42d44a1b4d43ce178c39ae54adf4018c 295 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 42 127 9.7E-28 T 11-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 VSVS12_00660 42d44a1b4d43ce178c39ae54adf4018c 295 PIRSF PIRSF006250 16 295 1.0E-101 T 11-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 VSVS12_00660 42d44a1b4d43ce178c39ae54adf4018c 295 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 26 294 4.4E-95 T 11-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 VSVS12_00660 42d44a1b4d43ce178c39ae54adf4018c 295 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 130 293 9.1E-58 T 11-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 VSVS12_00660 42d44a1b4d43ce178c39ae54adf4018c 295 SUPERFAMILY SSF51690 130 294 8.63E-60 T 11-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 VSVS12_00660 42d44a1b4d43ce178c39ae54adf4018c 295 Gene3D G3DSA:3.90.1170.20 21 293 4.4E-127 T 11-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 VSVS12_00660 42d44a1b4d43ce178c39ae54adf4018c 295 Gene3D G3DSA:3.20.20.70 138 284 4.4E-127 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_00660 42d44a1b4d43ce178c39ae54adf4018c 295 SUPERFAMILY SSF54675 15 128 1.69E-33 T 11-10-2018 VSVS12_02544 3aee3b244655a93bb22d1e951016dc74 227 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 222 38.279 T 11-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VSVS12_02544 3aee3b244655a93bb22d1e951016dc74 227 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 214 4.9E-81 T 11-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VSVS12_02544 3aee3b244655a93bb22d1e951016dc74 227 SMART SM00987 49 211 8.9E-37 T 11-10-2018 VSVS12_02544 3aee3b244655a93bb22d1e951016dc74 227 Pfam PF03167 Uracil DNA glycosylase superfamily 54 208 4.8E-24 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VSVS12_02544 3aee3b244655a93bb22d1e951016dc74 227 Gene3D G3DSA:3.40.470.10 2 227 1.1E-98 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VSVS12_02544 3aee3b244655a93bb22d1e951016dc74 227 SMART SM00986 49 211 8.9E-37 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VSVS12_02544 3aee3b244655a93bb22d1e951016dc74 227 SUPERFAMILY SSF52141 6 223 4.36E-90 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VSVS12_02544 3aee3b244655a93bb22d1e951016dc74 227 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 11-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VSVS12_02289 576c39e77eb0ca04da8ac57ae88e68bb 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VSVS12_02289 576c39e77eb0ca04da8ac57ae88e68bb 310 SUPERFAMILY SSF53335 16 293 8.29E-48 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_02289 576c39e77eb0ca04da8ac57ae88e68bb 310 Pfam PF05175 Methyltransferase small domain 134 216 1.8E-17 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 VSVS12_02289 576c39e77eb0ca04da8ac57ae88e68bb 310 Gene3D G3DSA:1.10.8.10 16 106 1.5E-5 T 11-10-2018 VSVS12_02289 576c39e77eb0ca04da8ac57ae88e68bb 310 Gene3D G3DSA:3.40.50.150 109 280 1.1E-45 T 11-10-2018 VSVS12_02289 576c39e77eb0ca04da8ac57ae88e68bb 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 8.9E-138 T 11-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 VSVS12_02289 576c39e77eb0ca04da8ac57ae88e68bb 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 53.996 T 11-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 VSVS12_02289 576c39e77eb0ca04da8ac57ae88e68bb 310 PIRSF PIRSF037167 2 307 4.0E-149 T 11-10-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 VSVS12_02289 576c39e77eb0ca04da8ac57ae88e68bb 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 299 3.9E-96 T 11-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 VSVS12_01306 af6169f38883a9fcd2018d6907c9c19d 1475 Pfam PF13402 Peptidase M60, enhancin and enhancin-like 1138 1420 2.9E-41 T 11-10-2018 IPR031161 Peptidase family M60 domain VSVS12_01306 af6169f38883a9fcd2018d6907c9c19d 1475 Pfam PF17291 N-terminal domain of M60-like peptidases 1027 1117 1.2E-12 T 11-10-2018 IPR035423 M60-like domain, N-terminal VSVS12_01306 af6169f38883a9fcd2018d6907c9c19d 1475 SMART SM01276 1041 1341 1.3E-81 T 11-10-2018 IPR031161 Peptidase family M60 domain VSVS12_01306 af6169f38883a9fcd2018d6907c9c19d 1475 Gene3D G3DSA:1.10.390.30 1267 1439 6.3E-13 T 11-10-2018 VSVS12_01306 af6169f38883a9fcd2018d6907c9c19d 1475 Pfam PF13322 Domain of unknown function (DUF4092) 404 524 1.8E-36 T 11-10-2018 IPR025385 Domain of unknown function DUF4092 VSVS12_00443 f6c2b315a058d1474de39dd2f7bf5e43 490 Pfam PF05036 Sporulation related domain 403 476 4.8E-8 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 VSVS12_00443 f6c2b315a058d1474de39dd2f7bf5e43 490 Gene3D G3DSA:3.40.50.300 7 168 2.1E-9 T 11-10-2018 VSVS12_00443 f6c2b315a058d1474de39dd2f7bf5e43 490 Gene3D G3DSA:3.30.70.1070 391 487 1.8E-24 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VSVS12_00443 f6c2b315a058d1474de39dd2f7bf5e43 490 Pfam PF13401 AAA domain 30 155 3.9E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_00443 f6c2b315a058d1474de39dd2f7bf5e43 490 SUPERFAMILY SSF52540 25 191 1.8E-8 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02651 28a22b2f8cd94189eb13292a27eaff8d 597 Gene3D G3DSA:3.30.70.3380 368 478 7.8E-39 T 11-10-2018 VSVS12_02651 28a22b2f8cd94189eb13292a27eaff8d 597 SUPERFAMILY SSF52540 2 205 1.24E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02651 28a22b2f8cd94189eb13292a27eaff8d 597 Gene3D G3DSA:2.40.30.10 186 285 1.5E-34 T 11-10-2018 VSVS12_02651 28a22b2f8cd94189eb13292a27eaff8d 597 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 1.2E-300 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 VSVS12_02651 28a22b2f8cd94189eb13292a27eaff8d 597 SUPERFAMILY SSF50447 165 288 2.05E-29 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VSVS12_02651 28a22b2f8cd94189eb13292a27eaff8d 597 SUPERFAMILY SSF54980 400 493 3.21E-24 T 11-10-2018 IPR035647 EF-G domain III/V-like VSVS12_02651 28a22b2f8cd94189eb13292a27eaff8d 597 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 306.511 T 11-10-2018 IPR006297 Elongation factor 4 GO:0005525 VSVS12_02651 28a22b2f8cd94189eb13292a27eaff8d 597 PRINTS PR00315 GTP-binding elongation factor signature 6 19 3.8E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_02651 28a22b2f8cd94189eb13292a27eaff8d 597 PRINTS PR00315 GTP-binding elongation factor signature 90 101 3.8E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_02651 28a22b2f8cd94189eb13292a27eaff8d 597 PRINTS PR00315 GTP-binding elongation factor signature 126 135 3.8E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_02651 28a22b2f8cd94189eb13292a27eaff8d 597 PRINTS PR00315 GTP-binding elongation factor signature 74 84 3.8E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_02651 28a22b2f8cd94189eb13292a27eaff8d 597 PRINTS PR00315 GTP-binding elongation factor signature 49 57 3.8E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_02651 28a22b2f8cd94189eb13292a27eaff8d 597 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site VSVS12_02651 28a22b2f8cd94189eb13292a27eaff8d 597 SUPERFAMILY SSF54980 292 370 1.62E-18 T 11-10-2018 IPR035647 EF-G domain III/V-like VSVS12_02651 28a22b2f8cd94189eb13292a27eaff8d 597 Gene3D G3DSA:3.40.50.300 1 185 1.9E-70 T 11-10-2018 VSVS12_02651 28a22b2f8cd94189eb13292a27eaff8d 597 SMART SM00838 401 486 0.0038 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like VSVS12_02651 28a22b2f8cd94189eb13292a27eaff8d 597 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 176 3.8E-17 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VSVS12_02651 28a22b2f8cd94189eb13292a27eaff8d 597 Gene3D G3DSA:3.30.70.870 286 367 8.0E-36 T 11-10-2018 VSVS12_02651 28a22b2f8cd94189eb13292a27eaff8d 597 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 7.8E-49 T 11-10-2018 IPR013842 GTP-binding protein LepA, C-terminal VSVS12_02651 28a22b2f8cd94189eb13292a27eaff8d 597 Pfam PF00679 Elongation factor G C-terminus 399 482 2.1E-19 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like VSVS12_02651 28a22b2f8cd94189eb13292a27eaff8d 597 Gene3D G3DSA:3.30.70.2570 479 553 3.9E-32 T 11-10-2018 IPR038363 LepA, C-terminal domain superfamily VSVS12_02651 28a22b2f8cd94189eb13292a27eaff8d 597 Pfam PF03144 Elongation factor Tu domain 2 205 275 1.8E-9 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VSVS12_02651 28a22b2f8cd94189eb13292a27eaff8d 597 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 6.4E-53 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_00453 71516d602c5c97ac6d97f432cbe66ca4 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 5.7E-11 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VSVS12_00453 71516d602c5c97ac6d97f432cbe66ca4 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 5.7E-11 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VSVS12_00453 71516d602c5c97ac6d97f432cbe66ca4 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 8.8E-16 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VSVS12_00453 71516d602c5c97ac6d97f432cbe66ca4 210 SMART SM00100 2 122 5.6E-27 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain VSVS12_00453 71516d602c5c97ac6d97f432cbe66ca4 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 11-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site VSVS12_00453 71516d602c5c97ac6d97f432cbe66ca4 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 7.0E-23 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain VSVS12_00453 71516d602c5c97ac6d97f432cbe66ca4 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 11-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 VSVS12_00453 71516d602c5c97ac6d97f432cbe66ca4 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 11-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site VSVS12_00453 71516d602c5c97ac6d97f432cbe66ca4 210 Gene3D G3DSA:2.60.120.10 10 138 3.0E-43 T 11-10-2018 IPR014710 RmlC-like jelly roll fold VSVS12_00453 71516d602c5c97ac6d97f432cbe66ca4 210 SUPERFAMILY SSF51206 8 137 7.2E-35 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like VSVS12_00453 71516d602c5c97ac6d97f432cbe66ca4 210 SMART SM00419 160 208 4.2E-17 T 11-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 VSVS12_00453 71516d602c5c97ac6d97f432cbe66ca4 210 Gene3D G3DSA:1.10.10.10 139 207 1.0E-35 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_00453 71516d602c5c97ac6d97f432cbe66ca4 210 SUPERFAMILY SSF46785 139 207 3.88E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_00078 9a8b3e80866ac6fc3102a626ccd153cc 151 Pfam PF07681 DoxX 27 108 4.0E-18 T 11-10-2018 IPR032808 DoxX family VSVS12_00654 3c06200a4a2be63638e7c6b4fc7be17e 957 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 631 2.4E-224 T 11-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 VSVS12_00654 3c06200a4a2be63638e7c6b4fc7be17e 957 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 937 0.0 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VSVS12_00654 3c06200a4a2be63638e7c6b4fc7be17e 957 Pfam PF08264 Anticodon-binding domain of tRNA 679 832 6.2E-40 T 11-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 VSVS12_00654 3c06200a4a2be63638e7c6b4fc7be17e 957 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 890 950 6.2E-18 T 11-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 VSVS12_00654 3c06200a4a2be63638e7c6b4fc7be17e 957 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VSVS12_00654 3c06200a4a2be63638e7c6b4fc7be17e 957 SUPERFAMILY SSF46589 890 954 1.73E-17 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 VSVS12_00654 3c06200a4a2be63638e7c6b4fc7be17e 957 Gene3D G3DSA:1.10.287.380 883 955 1.3E-18 T 11-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 VSVS12_00654 3c06200a4a2be63638e7c6b4fc7be17e 957 SUPERFAMILY SSF52374 1 641 5.03E-135 T 11-10-2018 VSVS12_00654 3c06200a4a2be63638e7c6b4fc7be17e 957 Gene3D G3DSA:3.40.50.620 2 196 7.3E-57 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VSVS12_00654 3c06200a4a2be63638e7c6b4fc7be17e 957 Gene3D G3DSA:3.40.50.620 358 592 8.7E-57 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VSVS12_00654 3c06200a4a2be63638e7c6b4fc7be17e 957 Gene3D G3DSA:1.10.730.10 635 822 1.2E-52 T 11-10-2018 VSVS12_00654 3c06200a4a2be63638e7c6b4fc7be17e 957 Gene3D G3DSA:3.90.740.10 197 357 4.5E-48 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VSVS12_00654 3c06200a4a2be63638e7c6b4fc7be17e 957 SUPERFAMILY SSF50677 190 365 7.19E-59 T 11-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 VSVS12_00654 3c06200a4a2be63638e7c6b4fc7be17e 957 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 955 15.999 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VSVS12_00654 3c06200a4a2be63638e7c6b4fc7be17e 957 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 1.6E-33 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VSVS12_00654 3c06200a4a2be63638e7c6b4fc7be17e 957 PRINTS PR00986 Valyl-tRNA synthetase signature 35 46 1.6E-33 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VSVS12_00654 3c06200a4a2be63638e7c6b4fc7be17e 957 PRINTS PR00986 Valyl-tRNA synthetase signature 369 382 1.6E-33 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VSVS12_00654 3c06200a4a2be63638e7c6b4fc7be17e 957 PRINTS PR00986 Valyl-tRNA synthetase signature 500 518 1.6E-33 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VSVS12_00654 3c06200a4a2be63638e7c6b4fc7be17e 957 PRINTS PR00986 Valyl-tRNA synthetase signature 469 490 1.6E-33 T 11-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 VSVS12_00654 3c06200a4a2be63638e7c6b4fc7be17e 957 SUPERFAMILY SSF47323 642 904 4.3E-65 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VSVS12_02781 03b5516d654e60f0c65cd87ee9cf0fd7 158 Gene3D G3DSA:3.30.1330.50 1 158 3.1E-70 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VSVS12_02781 03b5516d654e60f0c65cd87ee9cf0fd7 158 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 156 1.7E-69 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VSVS12_02781 03b5516d654e60f0c65cd87ee9cf0fd7 158 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 11-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VSVS12_02781 03b5516d654e60f0c65cd87ee9cf0fd7 158 Pfam PF02542 YgbB family 1 154 8.7E-66 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VSVS12_02781 03b5516d654e60f0c65cd87ee9cf0fd7 158 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 36.144 T 11-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VSVS12_02781 03b5516d654e60f0c65cd87ee9cf0fd7 158 SUPERFAMILY SSF69765 1 156 2.22E-66 T 11-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 VSVS12_04591 6c0c7a5608103af1210d603f6cd13b43 294 Gene3D G3DSA:1.10.443.10 116 294 1.2E-16 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VSVS12_04591 6c0c7a5608103af1210d603f6cd13b43 294 SUPERFAMILY SSF56349 25 294 6.77E-16 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VSVS12_04591 6c0c7a5608103af1210d603f6cd13b43 294 Pfam PF00589 Phage integrase family 117 293 3.3E-6 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VSVS12_01420 bf1487951e3d3ce9fac0b2e05388c736 1816 Gene3D G3DSA:3.40.50.2300 1388 1519 2.0E-43 T 11-10-2018 VSVS12_01420 bf1487951e3d3ce9fac0b2e05388c736 1816 Gene3D G3DSA:3.40.190.10 190 412 1.4E-46 T 11-10-2018 VSVS12_01420 bf1487951e3d3ce9fac0b2e05388c736 1816 SUPERFAMILY SSF52172 1235 1366 1.42E-23 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_01420 bf1487951e3d3ce9fac0b2e05388c736 1816 SUPERFAMILY SSF53850 199 401 2.1E-37 T 11-10-2018 VSVS12_01420 bf1487951e3d3ce9fac0b2e05388c736 1816 Gene3D G3DSA:3.40.190.10 282 376 1.4E-46 T 11-10-2018 VSVS12_01420 bf1487951e3d3ce9fac0b2e05388c736 1816 SMART SM00388 992 1057 2.5E-23 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_01420 bf1487951e3d3ce9fac0b2e05388c736 1816 SMART SM00062 198 411 5.5E-24 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VSVS12_01420 bf1487951e3d3ce9fac0b2e05388c736 1816 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 199 399 4.2E-30 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VSVS12_01420 bf1487951e3d3ce9fac0b2e05388c736 1816 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 1104 1218 7.8E-30 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_01420 bf1487951e3d3ce9fac0b2e05388c736 1816 Gene3D G3DSA:3.30.565.10 1058 1222 1.1E-53 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_01420 bf1487951e3d3ce9fac0b2e05388c736 1816 SMART SM00448 1390 1503 6.7E-40 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_01420 bf1487951e3d3ce9fac0b2e05388c736 1816 SMART SM00448 1238 1360 9.0E-17 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_01420 bf1487951e3d3ce9fac0b2e05388c736 1816 SUPERFAMILY SSF52172 1388 1508 1.71E-40 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_01420 bf1487951e3d3ce9fac0b2e05388c736 1816 SUPERFAMILY SSF55874 1046 1215 2.88E-45 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_01420 bf1487951e3d3ce9fac0b2e05388c736 1816 Gene3D G3DSA:1.10.287.130 980 1057 2.4E-26 T 11-10-2018 VSVS12_01420 bf1487951e3d3ce9fac0b2e05388c736 1816 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 859 979 7.2E-20 T 11-10-2018 IPR000014 PAS domain VSVS12_01420 bf1487951e3d3ce9fac0b2e05388c736 1816 Pfam PF01627 Hpt domain 1551 1631 8.9E-8 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VSVS12_01420 bf1487951e3d3ce9fac0b2e05388c736 1816 Gene3D G3DSA:3.40.50.2300 1233 1383 4.0E-25 T 11-10-2018 VSVS12_01420 bf1487951e3d3ce9fac0b2e05388c736 1816 Pfam PF00989 PAS fold 860 968 6.2E-10 T 11-10-2018 IPR013767 PAS fold GO:0006355 VSVS12_01420 bf1487951e3d3ce9fac0b2e05388c736 1816 Gene3D G3DSA:1.20.120.160 1526 1649 5.5E-14 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 VSVS12_01420 bf1487951e3d3ce9fac0b2e05388c736 1816 SUPERFAMILY SSF47226 1486 1613 3.53E-15 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 VSVS12_01420 bf1487951e3d3ce9fac0b2e05388c736 1816 Gene3D G3DSA:3.30.450.20 855 975 1.3E-23 T 11-10-2018 VSVS12_01420 bf1487951e3d3ce9fac0b2e05388c736 1816 SMART SM00091 859 926 3.2E-9 T 11-10-2018 IPR000014 PAS domain VSVS12_01420 bf1487951e3d3ce9fac0b2e05388c736 1816 SUPERFAMILY SSF55785 870 979 1.74E-16 T 11-10-2018 IPR035965 PAS domain superfamily VSVS12_01420 bf1487951e3d3ce9fac0b2e05388c736 1816 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1163 1173 1.0E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_01420 bf1487951e3d3ce9fac0b2e05388c736 1816 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1145 1159 1.0E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_01420 bf1487951e3d3ce9fac0b2e05388c736 1816 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1180 1198 1.0E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_01420 bf1487951e3d3ce9fac0b2e05388c736 1816 PRINTS PR00344 Bacterial sensor protein C-terminal signature 1204 1217 1.0E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_01420 bf1487951e3d3ce9fac0b2e05388c736 1816 Pfam PF00072 Response regulator receiver domain 1240 1359 3.2E-16 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_01420 bf1487951e3d3ce9fac0b2e05388c736 1816 Pfam PF00072 Response regulator receiver domain 1392 1503 4.0E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_01420 bf1487951e3d3ce9fac0b2e05388c736 1816 SMART SM00387 1104 1220 2.8E-38 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_01420 bf1487951e3d3ce9fac0b2e05388c736 1816 Pfam PF00512 His Kinase A (phospho-acceptor) domain 992 1057 2.8E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_01420 bf1487951e3d3ce9fac0b2e05388c736 1816 SUPERFAMILY SSF47384 977 1058 2.75E-22 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VSVS12_03135 d464cabe5eced97523810e8b36d5b360 241 SMART SM00895 99 226 3.9E-22 T 11-10-2018 IPR011711 GntR, C-terminal VSVS12_03135 d464cabe5eced97523810e8b36d5b360 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 28 89 1.7E-13 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VSVS12_03135 d464cabe5eced97523810e8b36d5b360 241 SUPERFAMILY SSF46785 23 118 3.6E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_03135 d464cabe5eced97523810e8b36d5b360 241 SUPERFAMILY SSF48008 95 232 1.49E-23 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VSVS12_03135 d464cabe5eced97523810e8b36d5b360 241 SMART SM00345 31 89 2.0E-11 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VSVS12_03135 d464cabe5eced97523810e8b36d5b360 241 Gene3D G3DSA:1.20.120.530 92 234 2.0E-28 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VSVS12_03135 d464cabe5eced97523810e8b36d5b360 241 Gene3D G3DSA:1.10.10.10 16 89 1.0E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_03135 d464cabe5eced97523810e8b36d5b360 241 Pfam PF07729 FCD domain 99 224 2.7E-25 T 11-10-2018 IPR011711 GntR, C-terminal VSVS12_03444 f18677255c47bf9bd1ca8d6b4368a961 147 SUPERFAMILY SSF46955 3 124 2.71E-28 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily VSVS12_03444 f18677255c47bf9bd1ca8d6b4368a961 147 ProSitePatterns PS00552 MerR-type HTH domain signature. 6 28 - T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VSVS12_03444 f18677255c47bf9bd1ca8d6b4368a961 147 Pfam PF09278 MerR, DNA binding 45 110 8.5E-18 T 11-10-2018 IPR015358 Transcription regulator MerR, DNA binding VSVS12_03444 f18677255c47bf9bd1ca8d6b4368a961 147 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 1.3E-13 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VSVS12_03444 f18677255c47bf9bd1ca8d6b4368a961 147 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 1.3E-13 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VSVS12_03444 f18677255c47bf9bd1ca8d6b4368a961 147 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 1.3E-13 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VSVS12_03444 f18677255c47bf9bd1ca8d6b4368a961 147 Gene3D G3DSA:1.10.1660.10 1 126 4.2E-32 T 11-10-2018 VSVS12_03444 f18677255c47bf9bd1ca8d6b4368a961 147 Pfam PF00376 MerR family regulatory protein 4 40 1.3E-12 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VSVS12_03444 f18677255c47bf9bd1ca8d6b4368a961 147 SMART SM00422 3 71 1.1E-25 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VSVS12_03444 f18677255c47bf9bd1ca8d6b4368a961 147 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 2 142 7.8E-67 T 11-10-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 VSVS12_00836 a487765302b95d1837f6a41ca462a29f 404 SMART SM00448 124 238 5.7E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_00836 a487765302b95d1837f6a41ca462a29f 404 SMART SM00448 3 115 1.8E-15 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_00836 a487765302b95d1837f6a41ca462a29f 404 SMART SM00267 244 404 1.5E-40 T 11-10-2018 IPR000160 GGDEF domain VSVS12_00836 a487765302b95d1837f6a41ca462a29f 404 Gene3D G3DSA:3.40.50.2300 119 252 4.7E-32 T 11-10-2018 VSVS12_00836 a487765302b95d1837f6a41ca462a29f 404 SUPERFAMILY SSF55073 260 402 5.26E-35 T 11-10-2018 IPR029787 Nucleotide cyclase VSVS12_00836 a487765302b95d1837f6a41ca462a29f 404 SUPERFAMILY SSF52172 3 120 5.12E-20 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_00836 a487765302b95d1837f6a41ca462a29f 404 Gene3D G3DSA:3.30.70.270 253 404 3.0E-39 T 11-10-2018 VSVS12_00836 a487765302b95d1837f6a41ca462a29f 404 Gene3D G3DSA:3.40.50.2300 1 118 9.0E-18 T 11-10-2018 VSVS12_00836 a487765302b95d1837f6a41ca462a29f 404 Pfam PF00990 Diguanylate cyclase, GGDEF domain 255 399 4.0E-32 T 11-10-2018 IPR000160 GGDEF domain VSVS12_00836 a487765302b95d1837f6a41ca462a29f 404 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 253 402 1.9E-37 T 11-10-2018 IPR000160 GGDEF domain VSVS12_00836 a487765302b95d1837f6a41ca462a29f 404 SUPERFAMILY SSF52172 123 269 3.98E-32 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_00836 a487765302b95d1837f6a41ca462a29f 404 Pfam PF00072 Response regulator receiver domain 5 105 2.1E-11 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_00836 a487765302b95d1837f6a41ca462a29f 404 Pfam PF00072 Response regulator receiver domain 127 235 9.0E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_01679 bb39172fc539d3d5c890acbca66c8426 149 Gene3D G3DSA:1.10.1220.10 98 149 2.5E-22 T 11-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 VSVS12_01679 bb39172fc539d3d5c890acbca66c8426 149 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 134 4.0E-60 T 11-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 VSVS12_01679 bb39172fc539d3d5c890acbca66c8426 149 Gene3D G3DSA:1.20.1270.380 1 89 1.6E-44 T 11-10-2018 IPR038339 MatP, N-terminal domain superfamily VSVS12_01679 bb39172fc539d3d5c890acbca66c8426 149 Pfam PF17414 MatP C-terminal ribbon-helix-helix domain 88 147 2.1E-26 T 11-10-2018 IPR035375 MatP, C-terminal ribbon-helix-helix domain VSVS12_01679 bb39172fc539d3d5c890acbca66c8426 149 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 28.285 T 11-10-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 VSVS12_01679 bb39172fc539d3d5c890acbca66c8426 149 Pfam PF06303 MatP N-terminal domain 2 85 4.5E-41 T 11-10-2018 IPR035087 MatP, N-terminal VSVS12_03103 1f0e9b10c09bddae8a441fee6ad5f4d8 544 Gene3D G3DSA:3.30.420.460 323 525 3.5E-209 T 11-10-2018 VSVS12_03103 1f0e9b10c09bddae8a441fee6ad5f4d8 544 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 281 489 1.2E-45 T 11-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 VSVS12_03103 1f0e9b10c09bddae8a441fee6ad5f4d8 544 PIRSF PIRSF000538 2 542 1.6E-71 T 11-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VSVS12_03103 1f0e9b10c09bddae8a441fee6ad5f4d8 544 SUPERFAMILY SSF53067 280 532 1.3E-55 T 11-10-2018 VSVS12_03103 1f0e9b10c09bddae8a441fee6ad5f4d8 544 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 259 7.6E-28 T 11-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 VSVS12_03103 1f0e9b10c09bddae8a441fee6ad5f4d8 544 Gene3D G3DSA:3.30.420.40 5 513 3.5E-209 T 11-10-2018 VSVS12_03103 1f0e9b10c09bddae8a441fee6ad5f4d8 544 SUPERFAMILY SSF53067 4 263 1.21E-59 T 11-10-2018 VSVS12_03103 1f0e9b10c09bddae8a441fee6ad5f4d8 544 TIGRFAM TIGR01315 5C_CHO_kinase: FGGY-family pentulose kinase 5 537 1.5E-207 T 11-10-2018 IPR006003 FGGY carbohydrate kinase, pentulose kinase GO:0005975|GO:0016773 VSVS12_00883 2a11408d36aa7480f228539cd859287a 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 11-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 VSVS12_00883 2a11408d36aa7480f228539cd859287a 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.0E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VSVS12_00883 2a11408d36aa7480f228539cd859287a 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 11-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 VSVS12_00883 2a11408d36aa7480f228539cd859287a 112 SMART SM00938 4 105 1.8E-69 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VSVS12_00883 2a11408d36aa7480f228539cd859287a 112 Gene3D G3DSA:3.30.70.120 1 112 8.7E-49 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VSVS12_00883 2a11408d36aa7480f228539cd859287a 112 SUPERFAMILY SSF54913 1 112 3.81E-47 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta VSVS12_00883 2a11408d36aa7480f228539cd859287a 112 PIRSF PIRSF039144 1 112 2.2E-58 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VSVS12_00883 2a11408d36aa7480f228539cd859287a 112 PRINTS PR00340 P-II protein signature 23 41 1.6E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VSVS12_00883 2a11408d36aa7480f228539cd859287a 112 PRINTS PR00340 P-II protein signature 52 75 1.6E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VSVS12_00883 2a11408d36aa7480f228539cd859287a 112 PRINTS PR00340 P-II protein signature 2 17 1.6E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VSVS12_00883 2a11408d36aa7480f228539cd859287a 112 PRINTS PR00340 P-II protein signature 83 103 1.6E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VSVS12_03779 79b9fb0059ba46e151fda74a6028c748 487 Gene3D G3DSA:3.30.9.10 125 290 4.0E-11 T 11-10-2018 VSVS12_03779 79b9fb0059ba46e151fda74a6028c748 487 Gene3D G3DSA:3.50.50.60 14 265 4.0E-11 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_03779 79b9fb0059ba46e151fda74a6028c748 487 SUPERFAMILY SSF51905 9 275 4.1E-20 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_03779 79b9fb0059ba46e151fda74a6028c748 487 Pfam PF01266 FAD dependent oxidoreductase 12 375 1.5E-15 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VSVS12_02403 4596fb8131fd7cd1d70915df332b4550 193 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 79 116 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VSVS12_02403 4596fb8131fd7cd1d70915df332b4550 193 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 34 175 45.008 T 11-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 VSVS12_02403 4596fb8131fd7cd1d70915df332b4550 193 Pfam PF14437 MafB19-like deaminase 30 175 2.7E-32 T 11-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 VSVS12_02403 4596fb8131fd7cd1d70915df332b4550 193 SUPERFAMILY SSF53927 25 179 4.85E-56 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VSVS12_02403 4596fb8131fd7cd1d70915df332b4550 193 Gene3D G3DSA:3.40.140.10 24 189 9.2E-64 T 11-10-2018 VSVS12_00335 9b13d860b025eea3162a82e4775c9467 343 Gene3D G3DSA:3.40.50.2000 163 341 2.1E-15 T 11-10-2018 VSVS12_00335 9b13d860b025eea3162a82e4775c9467 343 SUPERFAMILY SSF53756 2 340 8.47E-62 T 11-10-2018 VSVS12_00335 9b13d860b025eea3162a82e4775c9467 343 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 70 309 4.3E-10 T 11-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 VSVS12_00335 9b13d860b025eea3162a82e4775c9467 343 Gene3D G3DSA:3.40.50.2000 1 148 3.3E-26 T 11-10-2018 VSVS12_03345 bf9a5c0a5fb77bffb5520c0851d203dd 567 Pfam PF12799 Leucine Rich repeats (2 copies) 259 295 1.7E-6 T 11-10-2018 IPR025875 Leucine rich repeat 4 VSVS12_03345 bf9a5c0a5fb77bffb5520c0851d203dd 567 SUPERFAMILY SSF52058 377 550 2.38E-5 T 11-10-2018 VSVS12_03345 bf9a5c0a5fb77bffb5520c0851d203dd 567 Gene3D G3DSA:3.80.10.10 26 300 5.8E-41 T 11-10-2018 IPR032675 Leucine-rich repeat domain superfamily VSVS12_03345 bf9a5c0a5fb77bffb5520c0851d203dd 567 Gene3D G3DSA:3.80.10.10 351 567 4.5E-16 T 11-10-2018 IPR032675 Leucine-rich repeat domain superfamily VSVS12_03345 bf9a5c0a5fb77bffb5520c0851d203dd 567 SMART SM00369 72 95 12.0 T 11-10-2018 IPR003591 Leucine-rich repeat, typical subtype VSVS12_03345 bf9a5c0a5fb77bffb5520c0851d203dd 567 SMART SM00369 279 302 51.0 T 11-10-2018 IPR003591 Leucine-rich repeat, typical subtype VSVS12_03345 bf9a5c0a5fb77bffb5520c0851d203dd 567 SMART SM00369 237 261 19.0 T 11-10-2018 IPR003591 Leucine-rich repeat, typical subtype VSVS12_03345 bf9a5c0a5fb77bffb5520c0851d203dd 567 SUPERFAMILY SSF52058 31 335 8.16E-29 T 11-10-2018 VSVS12_01601 2fa9fa5f78e184bd16acc8376840873d 125 Gene3D G3DSA:3.30.1330.40 2 124 9.0E-27 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VSVS12_01601 2fa9fa5f78e184bd16acc8376840873d 125 Pfam PF01042 Endoribonuclease L-PSP 11 122 3.9E-21 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 VSVS12_01601 2fa9fa5f78e184bd16acc8376840873d 125 SUPERFAMILY SSF55298 3 123 1.88E-26 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VSVS12_04267 00a27dfcb0ceb2734bd1342300b14683 325 SUPERFAMILY SSF103481 229 324 1.96E-12 T 11-10-2018 VSVS12_04267 00a27dfcb0ceb2734bd1342300b14683 325 Pfam PF00892 EamA-like transporter family 37 174 1.5E-10 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VSVS12_04267 00a27dfcb0ceb2734bd1342300b14683 325 Pfam PF00892 EamA-like transporter family 187 321 5.6E-18 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VSVS12_04267 00a27dfcb0ceb2734bd1342300b14683 325 SUPERFAMILY SSF103481 83 177 4.18E-10 T 11-10-2018 VSVS12_03871 37db70915fbdf5fb1e00c1cf45ce2a06 411 SUPERFAMILY SSF55073 243 409 1.65E-33 T 11-10-2018 IPR029787 Nucleotide cyclase VSVS12_03871 37db70915fbdf5fb1e00c1cf45ce2a06 411 Pfam PF00990 Diguanylate cyclase, GGDEF domain 239 341 2.3E-20 T 11-10-2018 IPR000160 GGDEF domain VSVS12_03871 37db70915fbdf5fb1e00c1cf45ce2a06 411 Pfam PF00990 Diguanylate cyclase, GGDEF domain 365 406 5.3E-7 T 11-10-2018 IPR000160 GGDEF domain VSVS12_03871 37db70915fbdf5fb1e00c1cf45ce2a06 411 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 237 344 5.5E-23 T 11-10-2018 IPR000160 GGDEF domain VSVS12_03871 37db70915fbdf5fb1e00c1cf45ce2a06 411 SMART SM00267 227 411 4.9E-33 T 11-10-2018 IPR000160 GGDEF domain VSVS12_03871 37db70915fbdf5fb1e00c1cf45ce2a06 411 Gene3D G3DSA:3.30.70.270 231 410 1.0E-42 T 11-10-2018 VSVS12_03089 2ea713c73eabf07e8328e2cf8c052f3a 918 SUPERFAMILY SSF46894 847 910 9.86E-17 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VSVS12_03089 2ea713c73eabf07e8328e2cf8c052f3a 918 Gene3D G3DSA:1.25.40.10 462 826 6.8E-78 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_03089 2ea713c73eabf07e8328e2cf8c052f3a 918 SMART SM00421 852 909 8.7E-19 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_03089 2ea713c73eabf07e8328e2cf8c052f3a 918 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 885 897 6.5E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_03089 2ea713c73eabf07e8328e2cf8c052f3a 918 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 869 885 6.5E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_03089 2ea713c73eabf07e8328e2cf8c052f3a 918 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 855 869 6.5E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_03089 2ea713c73eabf07e8328e2cf8c052f3a 918 Gene3D G3DSA:1.10.10.10 845 915 5.3E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_03089 2ea713c73eabf07e8328e2cf8c052f3a 918 SUPERFAMILY SSF48452 459 821 6.39E-150 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_03089 2ea713c73eabf07e8328e2cf8c052f3a 918 SUPERFAMILY SSF52540 10 231 1.8E-10 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03089 2ea713c73eabf07e8328e2cf8c052f3a 918 Gene3D G3DSA:3.40.50.300 10 165 1.6E-7 T 11-10-2018 VSVS12_03089 2ea713c73eabf07e8328e2cf8c052f3a 918 Pfam PF00196 Bacterial regulatory proteins, luxR family 854 908 8.9E-19 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_03089 2ea713c73eabf07e8328e2cf8c052f3a 918 ProSitePatterns PS00622 LuxR-type HTH domain signature. 869 896 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_04327 2987077f9564bd96fb6ee5cd97f2ed82 70 SMART SM00357 6 70 4.1E-32 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 VSVS12_04327 2987077f9564bd96fb6ee5cd97f2ed82 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 11-10-2018 IPR019844 Cold-shock conserved site VSVS12_04327 2987077f9564bd96fb6ee5cd97f2ed82 70 SUPERFAMILY SSF50249 4 69 1.01E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_04327 2987077f9564bd96fb6ee5cd97f2ed82 70 Gene3D G3DSA:2.40.50.140 2 69 2.5E-29 T 11-10-2018 VSVS12_04327 2987077f9564bd96fb6ee5cd97f2ed82 70 PIRSF PIRSF002599 1 70 3.3E-25 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 VSVS12_04327 2987077f9564bd96fb6ee5cd97f2ed82 70 PRINTS PR00050 Cold shock protein signature 28 37 7.4E-18 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VSVS12_04327 2987077f9564bd96fb6ee5cd97f2ed82 70 PRINTS PR00050 Cold shock protein signature 43 61 7.4E-18 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VSVS12_04327 2987077f9564bd96fb6ee5cd97f2ed82 70 PRINTS PR00050 Cold shock protein signature 7 22 7.4E-18 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VSVS12_04327 2987077f9564bd96fb6ee5cd97f2ed82 70 Pfam PF00313 'Cold-shock' DNA-binding domain 6 69 1.6E-29 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VSVS12_03313 e4fde2f6c0e7006df6704227ecbfe11b 637 SMART SM00304 306 360 1.2E-12 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_03313 e4fde2f6c0e7006df6704227ecbfe11b 637 Pfam PF00672 HAMP domain 307 356 2.6E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_03313 e4fde2f6c0e7006df6704227ecbfe11b 637 Gene3D G3DSA:1.10.287.950 305 637 8.1E-78 T 11-10-2018 VSVS12_03313 e4fde2f6c0e7006df6704227ecbfe11b 637 SMART SM00283 375 636 2.6E-88 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_03313 e4fde2f6c0e7006df6704227ecbfe11b 637 Gene3D G3DSA:3.30.450.20 169 282 2.9E-16 T 11-10-2018 VSVS12_03313 e4fde2f6c0e7006df6704227ecbfe11b 637 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 421 603 1.2E-43 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_03313 e4fde2f6c0e7006df6704227ecbfe11b 637 SUPERFAMILY SSF58104 328 637 7.72E-78 T 11-10-2018 VSVS12_03292 9b5f39fcda02568e6ffa1b3f3a40392d 298 Gene3D G3DSA:1.10.10.10 5 70 1.4E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_03292 9b5f39fcda02568e6ffa1b3f3a40392d 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 1.1E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_03292 9b5f39fcda02568e6ffa1b3f3a40392d 298 Pfam PF03466 LysR substrate binding domain 91 295 2.5E-19 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_03292 9b5f39fcda02568e6ffa1b3f3a40392d 298 Gene3D G3DSA:3.40.190.10 160 266 8.4E-15 T 11-10-2018 VSVS12_03292 9b5f39fcda02568e6ffa1b3f3a40392d 298 Gene3D G3DSA:3.40.190.10 94 283 8.4E-15 T 11-10-2018 VSVS12_03292 9b5f39fcda02568e6ffa1b3f3a40392d 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 5.1E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_03292 9b5f39fcda02568e6ffa1b3f3a40392d 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 5.1E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_03292 9b5f39fcda02568e6ffa1b3f3a40392d 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 5.1E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_03292 9b5f39fcda02568e6ffa1b3f3a40392d 298 SUPERFAMILY SSF53850 88 292 4.52E-22 T 11-10-2018 VSVS12_03292 9b5f39fcda02568e6ffa1b3f3a40392d 298 SUPERFAMILY SSF46785 2 110 3.22E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_00428 5bb7f879aeb27f462e27ff83ef14cb1d 404 Gene3D G3DSA:3.40.50.620 9 177 3.1E-143 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VSVS12_00428 5bb7f879aeb27f462e27ff83ef14cb1d 404 Gene3D G3DSA:3.90.1260.10 68 355 3.1E-143 T 11-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VSVS12_00428 5bb7f879aeb27f462e27ff83ef14cb1d 404 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 12 20 - T 11-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VSVS12_00428 5bb7f879aeb27f462e27ff83ef14cb1d 404 Pfam PF00764 Arginosuccinate synthase 10 396 1.6E-142 T 11-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VSVS12_00428 5bb7f879aeb27f462e27ff83ef14cb1d 404 TIGRFAM TIGR00032 argG: argininosuccinate synthase 8 395 6.7E-133 T 11-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VSVS12_00428 5bb7f879aeb27f462e27ff83ef14cb1d 404 Hamap MF_00005 Argininosuccinate synthase [argG]. 6 402 50.788 T 11-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VSVS12_00428 5bb7f879aeb27f462e27ff83ef14cb1d 404 SUPERFAMILY SSF69864 177 400 1.05E-85 T 11-10-2018 VSVS12_00428 5bb7f879aeb27f462e27ff83ef14cb1d 404 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 121 132 - T 11-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VSVS12_00428 5bb7f879aeb27f462e27ff83ef14cb1d 404 Gene3D G3DSA:1.20.5.470 368 403 1.8E-7 T 11-10-2018 VSVS12_00428 5bb7f879aeb27f462e27ff83ef14cb1d 404 SUPERFAMILY SSF52402 7 170 2.72E-45 T 11-10-2018 VSVS12_00857 b52797b1fd29baa2db336df67bad8fe8 155 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 10 150 7.9E-41 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 VSVS12_00857 b52797b1fd29baa2db336df67bad8fe8 155 Gene3D G3DSA:1.10.940.10 3 155 6.7E-47 T 11-10-2018 IPR035926 NusB-like superfamily VSVS12_00857 b52797b1fd29baa2db336df67bad8fe8 155 Pfam PF01029 NusB family 11 149 1.6E-34 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 VSVS12_00857 b52797b1fd29baa2db336df67bad8fe8 155 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 8 153 22.392 T 11-10-2018 IPR011605 NusB antitermination factor GO:0006353 VSVS12_00857 b52797b1fd29baa2db336df67bad8fe8 155 SUPERFAMILY SSF48013 7 153 1.83E-38 T 11-10-2018 IPR035926 NusB-like superfamily VSVS12_04154 4f79e2468cc7f78aa8d6a1ff7f22a355 707 SUPERFAMILY SSF55781 181 333 2.4E-8 T 11-10-2018 VSVS12_04154 4f79e2468cc7f78aa8d6a1ff7f22a355 707 Gene3D G3DSA:3.30.450.40 170 345 1.3E-8 T 11-10-2018 IPR029016 GAF-like domain superfamily VSVS12_04154 4f79e2468cc7f78aa8d6a1ff7f22a355 707 Gene3D G3DSA:3.30.70.270 518 700 3.1E-44 T 11-10-2018 VSVS12_04154 4f79e2468cc7f78aa8d6a1ff7f22a355 707 Pfam PF00990 Diguanylate cyclase, GGDEF domain 533 694 7.9E-35 T 11-10-2018 IPR000160 GGDEF domain VSVS12_04154 4f79e2468cc7f78aa8d6a1ff7f22a355 707 SUPERFAMILY SSF55073 538 697 4.16E-37 T 11-10-2018 IPR029787 Nucleotide cyclase VSVS12_04154 4f79e2468cc7f78aa8d6a1ff7f22a355 707 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 529 697 1.3E-36 T 11-10-2018 IPR000160 GGDEF domain VSVS12_04154 4f79e2468cc7f78aa8d6a1ff7f22a355 707 SUPERFAMILY SSF55781 361 505 7.41E-5 T 11-10-2018 VSVS12_04154 4f79e2468cc7f78aa8d6a1ff7f22a355 707 SMART SM00267 522 699 2.2E-51 T 11-10-2018 IPR000160 GGDEF domain VSVS12_01395 810a5b90917480ccb9f89d7201a26313 236 Gene3D G3DSA:1.10.340.30 40 167 3.3E-19 T 11-10-2018 VSVS12_01395 810a5b90917480ccb9f89d7201a26313 236 SUPERFAMILY SSF48150 44 189 8.79E-38 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 VSVS12_01395 810a5b90917480ccb9f89d7201a26313 236 Pfam PF03352 Methyladenine glycosylase 45 138 2.3E-15 T 11-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 VSVS12_02378 aa81ad1f935932a954685fe62ff82be6 177 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 11-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 VSVS12_02378 aa81ad1f935932a954685fe62ff82be6 177 Gene3D G3DSA:3.40.50.360 3 176 1.3E-53 T 11-10-2018 IPR029039 Flavoprotein-like superfamily VSVS12_02378 aa81ad1f935932a954685fe62ff82be6 177 Pfam PF00258 Flavodoxin 6 162 7.5E-33 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VSVS12_02378 aa81ad1f935932a954685fe62ff82be6 177 PIRSF PIRSF038996 1 174 1.5E-64 T 11-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 VSVS12_02378 aa81ad1f935932a954685fe62ff82be6 177 TIGRFAM TIGR01752 flav_long: flavodoxin 4 170 6.8E-69 T 11-10-2018 IPR010086 Flavodoxin, long chain GO:0010181 VSVS12_02378 aa81ad1f935932a954685fe62ff82be6 177 SUPERFAMILY SSF52218 4 172 1.95E-49 T 11-10-2018 IPR029039 Flavoprotein-like superfamily VSVS12_01176 052c8eb645278d02d220025014f118a0 290 Gene3D G3DSA:3.40.50.1980 150 290 7.7E-37 T 11-10-2018 VSVS12_01176 052c8eb645278d02d220025014f118a0 290 Pfam PF01497 Periplasmic binding protein 33 261 4.5E-34 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain VSVS12_01176 052c8eb645278d02d220025014f118a0 290 SUPERFAMILY SSF53807 31 286 2.9E-44 T 11-10-2018 VSVS12_01176 052c8eb645278d02d220025014f118a0 290 Gene3D G3DSA:3.40.50.1980 27 149 5.5E-32 T 11-10-2018 VSVS12_04221 39714fc06b38ee26473030a251a3b41b 298 Gene3D G3DSA:1.10.357.140 22 181 6.0E-23 T 11-10-2018 VSVS12_04221 39714fc06b38ee26473030a251a3b41b 298 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 15 296 19.766 T 11-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 VSVS12_04221 39714fc06b38ee26473030a251a3b41b 298 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 70 92 - T 11-10-2018 IPR030470 UbiA prenyltransferase conserved site VSVS12_04221 39714fc06b38ee26473030a251a3b41b 298 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 18 295 1.3E-100 T 11-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 VSVS12_04221 39714fc06b38ee26473030a251a3b41b 298 Pfam PF01040 UbiA prenyltransferase family 32 277 2.3E-66 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 VSVS12_04603 18757fbfbde54b59d3e934d9ded9f2e1 310 Pfam PF02387 IncFII RepA protein family 24 297 1.7E-49 T 11-10-2018 IPR003446 Plasmid replication initiation, RepA GO:0006276 VSVS12_04395 95d4416c9067ac07a20be90c06626b69 336 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 335 6.2E-135 T 11-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 VSVS12_04395 95d4416c9067ac07a20be90c06626b69 336 SUPERFAMILY SSF51735 2 335 9.45E-92 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_04395 95d4416c9067ac07a20be90c06626b69 336 Gene3D G3DSA:3.40.50.720 3 274 7.9E-141 T 11-10-2018 VSVS12_04395 95d4416c9067ac07a20be90c06626b69 336 Gene3D G3DSA:3.90.25.10 194 329 7.9E-141 T 11-10-2018 VSVS12_04395 95d4416c9067ac07a20be90c06626b69 336 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 325 4.1E-54 T 11-10-2018 IPR016040 NAD(P)-binding domain VSVS12_04521 95d4416c9067ac07a20be90c06626b69 336 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 335 6.2E-135 T 11-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 VSVS12_04521 95d4416c9067ac07a20be90c06626b69 336 SUPERFAMILY SSF51735 2 335 9.45E-92 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_04521 95d4416c9067ac07a20be90c06626b69 336 Gene3D G3DSA:3.40.50.720 3 274 7.9E-141 T 11-10-2018 VSVS12_04521 95d4416c9067ac07a20be90c06626b69 336 Gene3D G3DSA:3.90.25.10 194 329 7.9E-141 T 11-10-2018 VSVS12_04521 95d4416c9067ac07a20be90c06626b69 336 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 325 4.1E-54 T 11-10-2018 IPR016040 NAD(P)-binding domain VSVS12_01330 559ab14989fca55ce6bfc722d0eb4075 814 Pfam PF00384 Molybdopterin oxidoreductase 116 573 3.7E-102 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VSVS12_01330 559ab14989fca55ce6bfc722d0eb4075 814 SUPERFAMILY SSF50692 687 810 8.82E-38 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily VSVS12_01330 559ab14989fca55ce6bfc722d0eb4075 814 Pfam PF01568 Molydopterin dinucleotide binding domain 692 803 2.4E-27 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VSVS12_01330 559ab14989fca55ce6bfc722d0eb4075 814 SUPERFAMILY SSF53706 55 693 1.44E-178 T 11-10-2018 VSVS12_01330 559ab14989fca55ce6bfc722d0eb4075 814 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 54 113 4.3E-17 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VSVS12_01330 559ab14989fca55ce6bfc722d0eb4075 814 Gene3D G3DSA:2.40.40.20 667 814 2.2E-42 T 11-10-2018 VSVS12_01330 559ab14989fca55ce6bfc722d0eb4075 814 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 728 755 - T 11-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 VSVS12_01330 559ab14989fca55ce6bfc722d0eb4075 814 Gene3D G3DSA:3.40.50.740 51 323 9.2E-89 T 11-10-2018 VSVS12_01330 559ab14989fca55ce6bfc722d0eb4075 814 SMART SM00926 54 113 9.6E-11 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VSVS12_01330 559ab14989fca55ce6bfc722d0eb4075 814 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 59 77 - T 11-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 VSVS12_01330 559ab14989fca55ce6bfc722d0eb4075 814 Gene3D G3DSA:3.40.228.10 344 417 2.6E-18 T 11-10-2018 VSVS12_01330 559ab14989fca55ce6bfc722d0eb4075 814 Gene3D G3DSA:3.40.50.740 420 623 1.9E-51 T 11-10-2018 VSVS12_01330 559ab14989fca55ce6bfc722d0eb4075 814 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 13 810 0.0 T 11-10-2018 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 VSVS12_01330 559ab14989fca55ce6bfc722d0eb4075 814 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 13 42 7.7E-5 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VSVS12_02488 b25add0e66cc84a55210b604e00605fa 109 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 19 101 1.6E-30 T 11-10-2018 IPR003849 Preprotein translocase YajC VSVS12_02488 b25add0e66cc84a55210b604e00605fa 109 SMART SM01323 17 101 1.6E-39 T 11-10-2018 IPR003849 Preprotein translocase YajC VSVS12_02488 b25add0e66cc84a55210b604e00605fa 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 57 75 2.6E-16 T 11-10-2018 IPR003849 Preprotein translocase YajC VSVS12_02488 b25add0e66cc84a55210b604e00605fa 109 PRINTS PR01853 Bacterial YajC preprotein translocase signature 19 39 2.6E-16 T 11-10-2018 IPR003849 Preprotein translocase YajC VSVS12_02488 b25add0e66cc84a55210b604e00605fa 109 Pfam PF02699 Preprotein translocase subunit 21 98 7.1E-27 T 11-10-2018 IPR003849 Preprotein translocase YajC VSVS12_02830 c171eadf934cd6f98aaaab8eeaf912c0 187 SUPERFAMILY SSF55729 2 187 1.41E-29 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_02830 c171eadf934cd6f98aaaab8eeaf912c0 187 Gene3D G3DSA:3.40.630.30 4 187 1.4E-47 T 11-10-2018 VSVS12_02830 c171eadf934cd6f98aaaab8eeaf912c0 187 Pfam PF00765 Autoinducer synthase 16 186 8.2E-22 T 11-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 VSVS12_02830 c171eadf934cd6f98aaaab8eeaf912c0 187 PRINTS PR01549 Autoinducer synthesis protein signature 66 84 6.1E-14 T 11-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 VSVS12_02830 c171eadf934cd6f98aaaab8eeaf912c0 187 PRINTS PR01549 Autoinducer synthesis protein signature 149 170 6.1E-14 T 11-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 VSVS12_02830 c171eadf934cd6f98aaaab8eeaf912c0 187 PRINTS PR01549 Autoinducer synthesis protein signature 18 37 6.1E-14 T 11-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 VSVS12_02830 c171eadf934cd6f98aaaab8eeaf912c0 187 PRINTS PR01549 Autoinducer synthesis protein signature 127 148 6.1E-14 T 11-10-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 VSVS12_03132 b8788c3500d3e7d20516433ca108e548 867 Gene3D G3DSA:3.30.499.20 9 362 2.0E-129 T 11-10-2018 VSVS12_03132 b8788c3500d3e7d20516433ca108e548 867 Pfam PF00694 Aconitase C-terminal domain 664 795 7.5E-30 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 VSVS12_03132 b8788c3500d3e7d20516433ca108e548 867 Gene3D G3DSA:3.30.499.10 363 569 7.0E-78 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 VSVS12_03132 b8788c3500d3e7d20516433ca108e548 867 SUPERFAMILY SSF52016 606 864 5.3E-66 T 11-10-2018 VSVS12_03132 b8788c3500d3e7d20516433ca108e548 867 SUPERFAMILY SSF53732 25 599 2.75E-185 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 VSVS12_03132 b8788c3500d3e7d20516433ca108e548 867 TIGRFAM TIGR02333 2met_isocit_dHY: 2-methylisocitrate dehydratase, Fe/S-dependent 4 866 0.0 T 11-10-2018 IPR012708 2-methylisocitrate dehydratase AcnD, Fe/S-dependent GO:0019679 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3 VSVS12_03132 b8788c3500d3e7d20516433ca108e548 867 Gene3D G3DSA:1.10.1440.20 570 626 1.5E-9 T 11-10-2018 VSVS12_03132 b8788c3500d3e7d20516433ca108e548 867 Pfam PF00330 Aconitase family (aconitate hydratase) 72 541 3.3E-148 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VSVS12_03132 b8788c3500d3e7d20516433ca108e548 867 Gene3D G3DSA:3.20.19.10 627 865 3.2E-81 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 VSVS12_03132 b8788c3500d3e7d20516433ca108e548 867 PRINTS PR00415 Aconitase family signature 164 172 1.0E-26 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VSVS12_03132 b8788c3500d3e7d20516433ca108e548 867 PRINTS PR00415 Aconitase family signature 140 153 1.0E-26 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VSVS12_03132 b8788c3500d3e7d20516433ca108e548 867 PRINTS PR00415 Aconitase family signature 283 296 1.0E-26 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VSVS12_03132 b8788c3500d3e7d20516433ca108e548 867 PRINTS PR00415 Aconitase family signature 193 206 1.0E-26 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VSVS12_03132 b8788c3500d3e7d20516433ca108e548 867 PRINTS PR00415 Aconitase family signature 410 421 1.0E-26 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VSVS12_03132 b8788c3500d3e7d20516433ca108e548 867 PRINTS PR00415 Aconitase family signature 207 222 1.0E-26 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VSVS12_03132 b8788c3500d3e7d20516433ca108e548 867 PRINTS PR00415 Aconitase family signature 269 282 1.0E-26 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VSVS12_03132 b8788c3500d3e7d20516433ca108e548 867 PRINTS PR00415 Aconitase family signature 362 376 1.0E-26 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VSVS12_03132 b8788c3500d3e7d20516433ca108e548 867 PRINTS PR00415 Aconitase family signature 472 485 1.0E-26 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VSVS12_03132 b8788c3500d3e7d20516433ca108e548 867 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 18 863 1.6E-285 T 11-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 VSVS12_04564 b8a89b854dcf4eb327001d3fe1786115 357 Pfam PF13412 Winged helix-turn-helix DNA-binding 193 220 5.1E-6 T 11-10-2018 VSVS12_04564 b8a89b854dcf4eb327001d3fe1786115 357 Gene3D G3DSA:1.10.10.2830 179 297 3.1E-34 T 11-10-2018 VSVS12_04564 b8a89b854dcf4eb327001d3fe1786115 357 Pfam PF08775 ParB family 232 353 2.4E-32 T 11-10-2018 IPR014884 ParB protein family, C-terminal VSVS12_04564 b8a89b854dcf4eb327001d3fe1786115 357 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 96 252 1.1E-17 T 11-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 VSVS12_01028 08a66f2ab4be3b98e297f477798c7935 1095 SMART SM00487 310 519 4.7E-10 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VSVS12_01028 08a66f2ab4be3b98e297f477798c7935 1095 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 7 224 2.0E-39 T 11-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 VSVS12_01028 08a66f2ab4be3b98e297f477798c7935 1095 SUPERFAMILY SSF52540 343 729 3.59E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01028 08a66f2ab4be3b98e297f477798c7935 1095 Gene3D G3DSA:3.90.1570.50 107 261 1.3E-15 T 11-10-2018 VSVS12_01028 08a66f2ab4be3b98e297f477798c7935 1095 Gene3D G3DSA:3.40.50.300 502 745 5.2E-34 T 11-10-2018 VSVS12_01028 08a66f2ab4be3b98e297f477798c7935 1095 Pfam PF04851 Type III restriction enzyme, res subunit 313 482 6.2E-18 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VSVS12_01028 08a66f2ab4be3b98e297f477798c7935 1095 SUPERFAMILY SSF52540 278 524 3.0E-21 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01028 08a66f2ab4be3b98e297f477798c7935 1095 Gene3D G3DSA:3.40.50.300 313 500 1.8E-48 T 11-10-2018 VSVS12_01028 08a66f2ab4be3b98e297f477798c7935 1095 TIGRFAM TIGR00348 hsdR: type I site-specific deoxyribonuclease, HsdR family 67 739 2.2E-137 T 11-10-2018 IPR004473 Restriction endonuclease, type I, HsdR GO:0003677|GO:0005524|GO:0009035|GO:0009307 VSVS12_02507 47142880664abef8d3ff4508d96e51d6 212 Pfam PF00691 OmpA family 110 204 4.1E-19 T 11-10-2018 IPR006665 OmpA-like domain VSVS12_02507 47142880664abef8d3ff4508d96e51d6 212 PRINTS PR01021 OMPA domain signature 155 171 2.0E-16 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VSVS12_02507 47142880664abef8d3ff4508d96e51d6 212 PRINTS PR01021 OMPA domain signature 140 155 2.0E-16 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VSVS12_02507 47142880664abef8d3ff4508d96e51d6 212 PRINTS PR01021 OMPA domain signature 111 133 2.0E-16 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VSVS12_02507 47142880664abef8d3ff4508d96e51d6 212 SUPERFAMILY SSF103088 105 209 6.8E-30 T 11-10-2018 IPR036737 OmpA-like domain superfamily VSVS12_02507 47142880664abef8d3ff4508d96e51d6 212 Gene3D G3DSA:3.30.1330.60 79 211 2.7E-31 T 11-10-2018 IPR036737 OmpA-like domain superfamily VSVS12_02436 28112436eadbde198280fa224c4898e8 309 PIRSF PIRSF016660 1 306 4.4E-121 T 11-10-2018 IPR008526 Inner membrane protein YedI VSVS12_02436 28112436eadbde198280fa224c4898e8 309 Pfam PF05661 Protein of unknown function (DUF808) 5 294 1.4E-114 T 11-10-2018 IPR008526 Inner membrane protein YedI VSVS12_01311 c92e19f1c65d21932ae04e585eb7153f 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 201 221 3.2E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01311 c92e19f1c65d21932ae04e585eb7153f 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 3.2E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01311 c92e19f1c65d21932ae04e585eb7153f 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 3.2E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01311 c92e19f1c65d21932ae04e585eb7153f 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 3.2E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01311 c92e19f1c65d21932ae04e585eb7153f 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 3.2E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01311 c92e19f1c65d21932ae04e585eb7153f 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 3.2E-30 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01311 c92e19f1c65d21932ae04e585eb7153f 239 Pfam PF00106 short chain dehydrogenase 3 189 2.7E-49 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01311 c92e19f1c65d21932ae04e585eb7153f 239 Gene3D G3DSA:3.40.50.720 1 239 2.8E-71 T 11-10-2018 VSVS12_01311 c92e19f1c65d21932ae04e585eb7153f 239 SUPERFAMILY SSF51735 3 223 6.02E-60 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_01311 c92e19f1c65d21932ae04e585eb7153f 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 5.4E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01311 c92e19f1c65d21932ae04e585eb7153f 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 5.4E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01311 c92e19f1c65d21932ae04e585eb7153f 239 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 5.4E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01311 c92e19f1c65d21932ae04e585eb7153f 239 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VSVS12_01672 791e8f41af230f4243a72db96ad71fac 708 PIRSF PIRSF037618 1 707 5.2E-295 T 11-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 VSVS12_01672 791e8f41af230f4243a72db96ad71fac 708 Gene3D G3DSA:3.40.50.150 169 371 7.4E-136 T 11-10-2018 VSVS12_01672 791e8f41af230f4243a72db96ad71fac 708 Pfam PF01170 Putative RNA methylase family UPF0020 162 374 5.2E-59 T 11-10-2018 IPR000241 Putative RNA methylase domain VSVS12_01672 791e8f41af230f4243a72db96ad71fac 708 SUPERFAMILY SSF53335 399 705 1.3E-68 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_01672 791e8f41af230f4243a72db96ad71fac 708 Gene3D G3DSA:3.40.50.150 488 706 8.5E-76 T 11-10-2018 VSVS12_01672 791e8f41af230f4243a72db96ad71fac 708 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 706 31.428 T 11-10-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 VSVS12_01672 791e8f41af230f4243a72db96ad71fac 708 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 436 666 1.6E-26 T 11-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 VSVS12_01672 791e8f41af230f4243a72db96ad71fac 708 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 305 311 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VSVS12_01672 791e8f41af230f4243a72db96ad71fac 708 SUPERFAMILY SSF53335 139 371 2.49E-39 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_01672 791e8f41af230f4243a72db96ad71fac 708 Pfam PF02926 THUMP domain 32 153 1.3E-8 T 11-10-2018 IPR004114 THUMP domain GO:0003723 VSVS12_01672 791e8f41af230f4243a72db96ad71fac 708 Gene3D G3DSA:3.30.750.80 396 487 4.2E-34 T 11-10-2018 VSVS12_01672 791e8f41af230f4243a72db96ad71fac 708 Gene3D G3DSA:3.30.2130.30 6 255 7.4E-136 T 11-10-2018 VSVS12_01672 791e8f41af230f4243a72db96ad71fac 708 SMART SM00981 56 154 2.0E-17 T 11-10-2018 IPR004114 THUMP domain GO:0003723 VSVS12_01672 791e8f41af230f4243a72db96ad71fac 708 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 11-10-2018 IPR000241 Putative RNA methylase domain VSVS12_01099 0e638710f9ac4cd4fce78a9c495b1fa5 127 Pfam PF01042 Endoribonuclease L-PSP 8 124 3.0E-42 T 11-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 VSVS12_01099 0e638710f9ac4cd4fce78a9c495b1fa5 127 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 2 125 4.5E-50 T 11-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 VSVS12_01099 0e638710f9ac4cd4fce78a9c495b1fa5 127 Gene3D G3DSA:3.30.1330.40 1 127 1.1E-52 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VSVS12_01099 0e638710f9ac4cd4fce78a9c495b1fa5 127 SUPERFAMILY SSF55298 2 126 9.11E-47 T 11-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 VSVS12_03931 0bd87ca52da2d93e7d09d65aba685628 455 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 57 441 1.6E-140 T 11-10-2018 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 VSVS12_03931 0bd87ca52da2d93e7d09d65aba685628 455 Pfam PF03606 C4-dicarboxylate anaerobic carrier 2 451 8.6E-126 T 11-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 VSVS12_02231 1ad8bb0c7de4e2ac850130b4eb50cf51 435 Gene3D G3DSA:3.40.47.10 5 434 4.0E-109 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 VSVS12_02231 1ad8bb0c7de4e2ac850130b4eb50cf51 435 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 6 435 2.3E-263 T 11-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 VSVS12_02231 1ad8bb0c7de4e2ac850130b4eb50cf51 435 ProSitePatterns PS00737 Thiolases signature 2. 381 397 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 VSVS12_02231 1ad8bb0c7de4e2ac850130b4eb50cf51 435 SUPERFAMILY SSF53901 296 434 3.64E-31 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 VSVS12_02231 1ad8bb0c7de4e2ac850130b4eb50cf51 435 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 1 435 65.723 T 11-10-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 VSVS12_02231 1ad8bb0c7de4e2ac850130b4eb50cf51 435 SUPERFAMILY SSF53901 14 294 5.01E-60 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 VSVS12_02231 1ad8bb0c7de4e2ac850130b4eb50cf51 435 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 16 433 3.5E-125 T 11-10-2018 IPR002155 Thiolase GO:0016747 VSVS12_02231 1ad8bb0c7de4e2ac850130b4eb50cf51 435 Pfam PF02803 Thiolase, C-terminal domain 295 433 2.2E-35 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 VSVS12_02231 1ad8bb0c7de4e2ac850130b4eb50cf51 435 PIRSF PIRSF000429 8 435 2.4E-117 T 11-10-2018 IPR002155 Thiolase GO:0016747 VSVS12_02231 1ad8bb0c7de4e2ac850130b4eb50cf51 435 Pfam PF00108 Thiolase, N-terminal domain 14 286 5.3E-61 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 VSVS12_00640 d7d169d7ad513a232cafa7fcb1dfa262 126 Pfam PF04379 ApaG domain 19 102 1.3E-30 T 11-10-2018 IPR007474 ApaG domain VSVS12_00640 d7d169d7ad513a232cafa7fcb1dfa262 126 SUPERFAMILY SSF110069 5 126 1.7E-44 T 11-10-2018 IPR036767 ApaG domain superfamily VSVS12_00640 d7d169d7ad513a232cafa7fcb1dfa262 126 Hamap MF_00791 Protein ApaG [apaG]. 1 126 30.43 T 11-10-2018 IPR023065 Uncharacterised protein family ApaG VSVS12_00640 d7d169d7ad513a232cafa7fcb1dfa262 126 Gene3D G3DSA:2.60.40.1470 1 126 1.4E-44 T 11-10-2018 IPR036767 ApaG domain superfamily VSVS12_02655 46f5c3f291de7666bfae4807889882bf 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 185 1.1E-31 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VSVS12_02655 46f5c3f291de7666bfae4807889882bf 192 Gene3D G3DSA:1.10.1740.10 1 121 1.5E-45 T 11-10-2018 VSVS12_02655 46f5c3f291de7666bfae4807889882bf 192 SUPERFAMILY SSF88659 124 185 2.06E-16 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VSVS12_02655 46f5c3f291de7666bfae4807889882bf 192 SUPERFAMILY SSF88946 2 107 9.26E-33 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VSVS12_02655 46f5c3f291de7666bfae4807889882bf 192 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 47 78 - T 11-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VSVS12_02655 46f5c3f291de7666bfae4807889882bf 192 Gene3D G3DSA:1.10.10.10 122 192 6.7E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_02655 46f5c3f291de7666bfae4807889882bf 192 Pfam PF04542 Sigma-70 region 2 25 92 1.5E-18 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VSVS12_02655 46f5c3f291de7666bfae4807889882bf 192 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 2 190 4.3E-101 T 11-10-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VSVS12_02655 46f5c3f291de7666bfae4807889882bf 192 Pfam PF08281 Sigma-70, region 4 134 181 1.6E-16 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VSVS12_00212 7d9b3782da0af2da27a88cf49e62dd97 415 Gene3D G3DSA:3.40.640.10 1 414 1.1E-148 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VSVS12_00212 7d9b3782da0af2da27a88cf49e62dd97 415 SUPERFAMILY SSF53383 13 410 1.36E-62 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VSVS12_00212 7d9b3782da0af2da27a88cf49e62dd97 415 Pfam PF00155 Aminotransferase class I and II 67 401 2.4E-28 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VSVS12_02020 07d944e272770f96f52e119197c4511b 833 Gene3D G3DSA:1.10.287.130 462 526 1.6E-34 T 11-10-2018 VSVS12_02020 07d944e272770f96f52e119197c4511b 833 Pfam PF00072 Response regulator receiver domain 714 822 7.5E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_02020 07d944e272770f96f52e119197c4511b 833 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 578 677 4.8E-15 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_02020 07d944e272770f96f52e119197c4511b 833 Gene3D G3DSA:3.30.565.10 527 676 1.6E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_02020 07d944e272770f96f52e119197c4511b 833 SUPERFAMILY SSF55874 525 677 8.77E-31 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_02020 07d944e272770f96f52e119197c4511b 833 PRINTS PR00344 Bacterial sensor protein C-terminal signature 627 637 5.7E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_02020 07d944e272770f96f52e119197c4511b 833 PRINTS PR00344 Bacterial sensor protein C-terminal signature 663 676 5.7E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_02020 07d944e272770f96f52e119197c4511b 833 PRINTS PR00344 Bacterial sensor protein C-terminal signature 609 623 5.7E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_02020 07d944e272770f96f52e119197c4511b 833 PRINTS PR00344 Bacterial sensor protein C-terminal signature 639 657 5.7E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_02020 07d944e272770f96f52e119197c4511b 833 SMART SM00448 712 822 4.1E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_02020 07d944e272770f96f52e119197c4511b 833 SUPERFAMILY SSF52172 710 823 1.85E-31 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_02020 07d944e272770f96f52e119197c4511b 833 SMART SM00387 570 679 1.3E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_02020 07d944e272770f96f52e119197c4511b 833 Gene3D G3DSA:3.40.50.2300 701 831 4.2E-33 T 11-10-2018 VSVS12_02940 f582dbcdb03675493fcb412641c214eb 142 SUPERFAMILY SSF46906 68 141 5.89E-25 T 11-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily VSVS12_02940 f582dbcdb03675493fcb412641c214eb 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 70 7.0E-14 T 11-10-2018 VSVS12_02940 f582dbcdb03675493fcb412641c214eb 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 2.6E-29 T 11-10-2018 IPR020784 Ribosomal protein L11, N-terminal VSVS12_02940 f582dbcdb03675493fcb412641c214eb 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.58 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 VSVS12_02940 f582dbcdb03675493fcb412641c214eb 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 6.5E-64 T 11-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02940 f582dbcdb03675493fcb412641c214eb 142 SUPERFAMILY SSF54747 3 73 4.19E-30 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily VSVS12_02940 f582dbcdb03675493fcb412641c214eb 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 11-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_02940 f582dbcdb03675493fcb412641c214eb 142 SMART SM00649 9 141 4.0E-80 T 11-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 VSVS12_02940 f582dbcdb03675493fcb412641c214eb 142 Gene3D G3DSA:3.30.1550.10 2 72 1.0E-34 T 11-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily VSVS12_02940 f582dbcdb03675493fcb412641c214eb 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 1.5E-23 T 11-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 VSVS12_02940 f582dbcdb03675493fcb412641c214eb 142 Gene3D G3DSA:1.10.10.250 73 141 1.5E-25 T 11-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily VSVS12_00882 bd13fe0c7bed6762f77e5eaa3a5504b7 436 Pfam PF01171 PP-loop family 19 197 9.1E-57 T 11-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 VSVS12_00882 bd13fe0c7bed6762f77e5eaa3a5504b7 436 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 5 304 22.625 T 11-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VSVS12_00882 bd13fe0c7bed6762f77e5eaa3a5504b7 436 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 362 408 3.9E-18 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VSVS12_00882 bd13fe0c7bed6762f77e5eaa3a5504b7 436 SMART SM00977 362 431 3.0E-24 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VSVS12_00882 bd13fe0c7bed6762f77e5eaa3a5504b7 436 Gene3D G3DSA:3.40.50.620 8 230 1.5E-70 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VSVS12_00882 bd13fe0c7bed6762f77e5eaa3a5504b7 436 SUPERFAMILY SSF56037 320 433 6.02E-27 T 11-10-2018 VSVS12_00882 bd13fe0c7bed6762f77e5eaa3a5504b7 436 Pfam PF09179 TilS substrate binding domain 245 312 2.3E-17 T 11-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VSVS12_00882 bd13fe0c7bed6762f77e5eaa3a5504b7 436 SUPERFAMILY SSF82829 231 314 1.29E-21 T 11-10-2018 VSVS12_00882 bd13fe0c7bed6762f77e5eaa3a5504b7 436 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 19 200 1.1E-52 T 11-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VSVS12_00882 bd13fe0c7bed6762f77e5eaa3a5504b7 436 Gene3D G3DSA:1.20.59.20 231 315 1.4E-25 T 11-10-2018 VSVS12_00882 bd13fe0c7bed6762f77e5eaa3a5504b7 436 Pfam PF11734 TilS substrate C-terminal domain 362 426 6.9E-23 T 11-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 VSVS12_00882 bd13fe0c7bed6762f77e5eaa3a5504b7 436 SUPERFAMILY SSF52402 15 227 9.18E-61 T 11-10-2018 VSVS12_02557 95468391952281981e23ebdda994f0bb 407 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 11-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 VSVS12_02557 95468391952281981e23ebdda994f0bb 407 SMART SM00864 13 205 1.3E-113 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VSVS12_02557 95468391952281981e23ebdda994f0bb 407 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 370 38.172 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 VSVS12_02557 95468391952281981e23ebdda994f0bb 407 SMART SM00865 207 325 7.2E-56 T 11-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 VSVS12_02557 95468391952281981e23ebdda994f0bb 407 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 328 2.4E-137 T 11-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 VSVS12_02557 95468391952281981e23ebdda994f0bb 407 SUPERFAMILY SSF52490 13 208 1.31E-69 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 VSVS12_02557 95468391952281981e23ebdda994f0bb 407 Pfam PF12327 FtsZ family, C-terminal domain 222 316 2.5E-36 T 11-10-2018 IPR024757 Cell division protein FtsZ, C-terminal VSVS12_02557 95468391952281981e23ebdda994f0bb 407 PRINTS PR00423 Cell division protein FtsZ signature 126 147 5.2E-52 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VSVS12_02557 95468391952281981e23ebdda994f0bb 407 PRINTS PR00423 Cell division protein FtsZ signature 189 211 5.2E-52 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VSVS12_02557 95468391952281981e23ebdda994f0bb 407 PRINTS PR00423 Cell division protein FtsZ signature 212 233 5.2E-52 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VSVS12_02557 95468391952281981e23ebdda994f0bb 407 PRINTS PR00423 Cell division protein FtsZ signature 98 118 5.2E-52 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VSVS12_02557 95468391952281981e23ebdda994f0bb 407 Gene3D G3DSA:3.40.50.1440 5 220 3.1E-80 T 11-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 VSVS12_02557 95468391952281981e23ebdda994f0bb 407 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 14 173 1.9E-40 T 11-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 VSVS12_02557 95468391952281981e23ebdda994f0bb 407 SUPERFAMILY SSF55307 204 320 8.7E-43 T 11-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 VSVS12_02557 95468391952281981e23ebdda994f0bb 407 Gene3D G3DSA:3.30.1330.20 221 327 1.2E-34 T 11-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 VSVS12_02557 95468391952281981e23ebdda994f0bb 407 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 11-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 VSVS12_04182 4b8c37f0d1d6f1979c6cdfa3376faedf 337 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 2 12 4.0E-6 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VSVS12_04182 4b8c37f0d1d6f1979c6cdfa3376faedf 337 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 12 22 4.0E-6 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VSVS12_04182 4b8c37f0d1d6f1979c6cdfa3376faedf 337 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 11-10-2018 VSVS12_04182 4b8c37f0d1d6f1979c6cdfa3376faedf 337 SUPERFAMILY SSF47413 1 46 1.97E-11 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VSVS12_04182 4b8c37f0d1d6f1979c6cdfa3376faedf 337 Gene3D G3DSA:1.10.260.40 1 56 2.0E-16 T 11-10-2018 VSVS12_04182 4b8c37f0d1d6f1979c6cdfa3376faedf 337 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 45 5.1E-17 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VSVS12_04182 4b8c37f0d1d6f1979c6cdfa3376faedf 337 Pfam PF13377 Periplasmic binding protein-like domain 162 321 2.1E-17 T 11-10-2018 VSVS12_04182 4b8c37f0d1d6f1979c6cdfa3376faedf 337 SMART SM00354 1 67 2.5E-19 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VSVS12_04182 4b8c37f0d1d6f1979c6cdfa3376faedf 337 SUPERFAMILY SSF53822 55 303 1.3E-45 T 11-10-2018 IPR028082 Periplasmic binding protein-like I VSVS12_04182 4b8c37f0d1d6f1979c6cdfa3376faedf 337 Gene3D G3DSA:3.40.50.2300 154 276 2.6E-47 T 11-10-2018 VSVS12_04182 4b8c37f0d1d6f1979c6cdfa3376faedf 337 Gene3D G3DSA:3.40.50.2300 59 293 2.6E-47 T 11-10-2018 VSVS12_00584 9249f372dbf8bef672d444af0c9e68ef 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 169 185 3.8E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_00584 9249f372dbf8bef672d444af0c9e68ef 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 169 3.8E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_00584 9249f372dbf8bef672d444af0c9e68ef 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 185 197 3.8E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_00584 9249f372dbf8bef672d444af0c9e68ef 215 SMART SM00421 152 209 4.1E-20 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_00584 9249f372dbf8bef672d444af0c9e68ef 215 SUPERFAMILY SSF46894 140 212 8.5E-20 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VSVS12_00584 9249f372dbf8bef672d444af0c9e68ef 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 209 8.6E-20 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_00584 9249f372dbf8bef672d444af0c9e68ef 215 Gene3D G3DSA:3.40.50.2300 8 142 1.4E-20 T 11-10-2018 VSVS12_00584 9249f372dbf8bef672d444af0c9e68ef 215 Gene3D G3DSA:1.10.10.10 146 215 1.2E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_02976 4bec2142e4860ed733cc6d92ecaa24b4 608 Pfam PF00571 CBS domain 223 276 2.1E-4 T 11-10-2018 IPR000644 CBS domain VSVS12_02976 4bec2142e4860ed733cc6d92ecaa24b4 608 Gene3D G3DSA:2.60.120.10 5 139 2.4E-12 T 11-10-2018 IPR014710 RmlC-like jelly roll fold VSVS12_02976 4bec2142e4860ed733cc6d92ecaa24b4 608 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 472 604 8.2E-40 T 11-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding VSVS12_02976 4bec2142e4860ed733cc6d92ecaa24b4 608 Pfam PF00027 Cyclic nucleotide-binding domain 31 113 1.2E-10 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain VSVS12_02976 4bec2142e4860ed733cc6d92ecaa24b4 608 SUPERFAMILY SSF54631 144 276 1.97E-17 T 11-10-2018 VSVS12_02976 4bec2142e4860ed733cc6d92ecaa24b4 608 SUPERFAMILY SSF51206 9 130 1.1E-17 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like VSVS12_02976 4bec2142e4860ed733cc6d92ecaa24b4 608 Gene3D G3DSA:3.10.580.10 140 286 4.5E-19 T 11-10-2018 VSVS12_02976 4bec2142e4860ed733cc6d92ecaa24b4 608 Pfam PF03445 Putative nucleotidyltransferase DUF294 302 432 1.5E-41 T 11-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 VSVS12_02115 ed0d762c0a67e36e6bbef854c2547d73 376 Pfam PF13421 SPFH domain-Band 7 family 26 236 1.1E-94 T 11-10-2018 IPR033880 SPFH domain, YdjI-like VSVS12_02115 ed0d762c0a67e36e6bbef854c2547d73 376 Pfam PF14237 Domain of unknown function (DUF4339) 313 356 6.6E-17 T 11-10-2018 IPR025640 Domain of unknown function DUF4339 Reactome: R-HSA-6798695 VSVS12_02115 ed0d762c0a67e36e6bbef854c2547d73 376 SUPERFAMILY SSF117892 90 231 1.31E-8 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily VSVS12_04502 0980b1e76e3b7bcce4b66d0ad5937fcc 102 Gene3D G3DSA:2.40.50.140 1 85 4.4E-9 T 11-10-2018 VSVS12_04502 0980b1e76e3b7bcce4b66d0ad5937fcc 102 SUPERFAMILY SSF50249 6 84 3.32E-8 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_04375 0980b1e76e3b7bcce4b66d0ad5937fcc 102 Gene3D G3DSA:2.40.50.140 1 85 4.4E-9 T 11-10-2018 VSVS12_04375 0980b1e76e3b7bcce4b66d0ad5937fcc 102 SUPERFAMILY SSF50249 6 84 3.32E-8 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_02043 c2fa31d90a9e15ce91d2fbb952e52749 1032 SUPERFAMILY SSF82693 150 337 1.23E-17 T 11-10-2018 VSVS12_02043 c2fa31d90a9e15ce91d2fbb952e52749 1032 Gene3D G3DSA:3.30.70.1430 570 668 3.1E-257 T 11-10-2018 VSVS12_02043 c2fa31d90a9e15ce91d2fbb952e52749 1032 Gene3D G3DSA:1.20.1640.10 521 1022 3.1E-257 T 11-10-2018 VSVS12_02043 c2fa31d90a9e15ce91d2fbb952e52749 1032 SUPERFAMILY SSF82714 727 801 2.88E-8 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VSVS12_02043 c2fa31d90a9e15ce91d2fbb952e52749 1032 Gene3D G3DSA:3.30.70.1430 54 818 3.1E-257 T 11-10-2018 VSVS12_02043 c2fa31d90a9e15ce91d2fbb952e52749 1032 Gene3D G3DSA:3.30.2090.10 720 810 3.1E-257 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VSVS12_02043 c2fa31d90a9e15ce91d2fbb952e52749 1032 Gene3D G3DSA:3.30.70.1320 150 342 3.1E-257 T 11-10-2018 VSVS12_02043 c2fa31d90a9e15ce91d2fbb952e52749 1032 Pfam PF00873 AcrB/AcrD/AcrF family 18 1026 1.1E-169 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_02043 c2fa31d90a9e15ce91d2fbb952e52749 1032 SUPERFAMILY SSF82866 306 505 3.14E-34 T 11-10-2018 VSVS12_02043 c2fa31d90a9e15ce91d2fbb952e52749 1032 SUPERFAMILY SSF82693 54 149 4.36E-23 T 11-10-2018 VSVS12_02043 c2fa31d90a9e15ce91d2fbb952e52749 1032 Gene3D G3DSA:3.30.70.1440 669 870 3.1E-257 T 11-10-2018 VSVS12_02043 c2fa31d90a9e15ce91d2fbb952e52749 1032 SUPERFAMILY SSF82714 198 281 3.01E-11 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VSVS12_02043 c2fa31d90a9e15ce91d2fbb952e52749 1032 SUPERFAMILY SSF82866 806 1028 1.11E-44 T 11-10-2018 VSVS12_02043 c2fa31d90a9e15ce91d2fbb952e52749 1032 PRINTS PR00702 Acriflavin resistance protein family signature 52 70 2.5E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_02043 c2fa31d90a9e15ce91d2fbb952e52749 1032 PRINTS PR00702 Acriflavin resistance protein family signature 453 476 2.5E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_02043 c2fa31d90a9e15ce91d2fbb952e52749 1032 PRINTS PR00702 Acriflavin resistance protein family signature 346 369 2.5E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_02043 c2fa31d90a9e15ce91d2fbb952e52749 1032 PRINTS PR00702 Acriflavin resistance protein family signature 24 48 2.5E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_02043 c2fa31d90a9e15ce91d2fbb952e52749 1032 PRINTS PR00702 Acriflavin resistance protein family signature 400 424 2.5E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_02043 c2fa31d90a9e15ce91d2fbb952e52749 1032 PRINTS PR00702 Acriflavin resistance protein family signature 478 501 2.5E-26 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_02043 c2fa31d90a9e15ce91d2fbb952e52749 1032 Gene3D G3DSA:3.30.2090.10 193 285 3.1E-257 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VSVS12_02043 c2fa31d90a9e15ce91d2fbb952e52749 1032 Gene3D G3DSA:1.20.1640.10 24 520 3.1E-257 T 11-10-2018 VSVS12_03973 4b44d4047290d3dde449ff8cbe04753b 397 TIGRFAM TIGR00016 ackA: acetate kinase 2 396 3.1E-145 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VSVS12_03973 4b44d4047290d3dde449ff8cbe04753b 397 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VSVS12_03973 4b44d4047290d3dde449ff8cbe04753b 397 SUPERFAMILY SSF53067 5 196 1.29E-63 T 11-10-2018 VSVS12_03973 4b44d4047290d3dde449ff8cbe04753b 397 PRINTS PR00471 Acetate kinase family signature 378 390 5.3E-47 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VSVS12_03973 4b44d4047290d3dde449ff8cbe04753b 397 PRINTS PR00471 Acetate kinase family signature 299 312 5.3E-47 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VSVS12_03973 4b44d4047290d3dde449ff8cbe04753b 397 PRINTS PR00471 Acetate kinase family signature 6 17 5.3E-47 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VSVS12_03973 4b44d4047290d3dde449ff8cbe04753b 397 PRINTS PR00471 Acetate kinase family signature 173 186 5.3E-47 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VSVS12_03973 4b44d4047290d3dde449ff8cbe04753b 397 PRINTS PR00471 Acetate kinase family signature 203 224 5.3E-47 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VSVS12_03973 4b44d4047290d3dde449ff8cbe04753b 397 PRINTS PR00471 Acetate kinase family signature 321 337 5.3E-47 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VSVS12_03973 4b44d4047290d3dde449ff8cbe04753b 397 Gene3D G3DSA:3.30.420.40 3 195 2.1E-67 T 11-10-2018 VSVS12_03973 4b44d4047290d3dde449ff8cbe04753b 397 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 203 220 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VSVS12_03973 4b44d4047290d3dde449ff8cbe04753b 397 Hamap MF_00020 Acetate kinase [ackA]. 1 397 169.554 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VSVS12_03973 4b44d4047290d3dde449ff8cbe04753b 397 Pfam PF00871 Acetokinase family 6 391 2.3E-143 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VSVS12_03973 4b44d4047290d3dde449ff8cbe04753b 397 Gene3D G3DSA:3.30.420.40 196 397 7.3E-74 T 11-10-2018 VSVS12_03973 4b44d4047290d3dde449ff8cbe04753b 397 PIRSF PIRSF000722 2 397 3.3E-137 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VSVS12_03973 4b44d4047290d3dde449ff8cbe04753b 397 SUPERFAMILY SSF53067 158 396 2.49E-79 T 11-10-2018 VSVS12_00798 c81bfb31ab2edd5943d261ebd59e77dc 117 Pfam PF13358 DDE superfamily endonuclease 5 85 3.4E-18 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain VSVS12_00798 c81bfb31ab2edd5943d261ebd59e77dc 117 Gene3D G3DSA:3.30.420.470 5 111 1.9E-12 T 11-10-2018 VSVS12_00911 d57a46d5b8a585b7ec66cd291c69fb6c 92 Gene3D G3DSA:3.30.70.260 6 92 1.2E-33 T 11-10-2018 VSVS12_00911 d57a46d5b8a585b7ec66cd291c69fb6c 92 SUPERFAMILY SSF117991 7 92 2.09E-31 T 11-10-2018 IPR027471 YbeD-like domain superfamily VSVS12_00911 d57a46d5b8a585b7ec66cd291c69fb6c 92 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 6 92 26.375 T 11-10-2018 IPR007454 Uncharacterised protein family UPF0250 VSVS12_00911 d57a46d5b8a585b7ec66cd291c69fb6c 92 Pfam PF04359 Protein of unknown function (DUF493) 12 92 2.5E-29 T 11-10-2018 IPR007454 Uncharacterised protein family UPF0250 VSVS12_02988 6044ec5fe67a46ae8504a663a892c80d 429 SMART SM01210 330 423 1.9E-52 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VSVS12_02988 6044ec5fe67a46ae8504a663a892c80d 429 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 2.9E-82 T 11-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VSVS12_02988 6044ec5fe67a46ae8504a663a892c80d 429 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 423 43.559 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VSVS12_02988 6044ec5fe67a46ae8504a663a892c80d 429 Gene3D G3DSA:3.40.50.20 2 95 1.0E-36 T 11-10-2018 VSVS12_02988 6044ec5fe67a46ae8504a663a892c80d 429 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 11-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VSVS12_02988 6044ec5fe67a46ae8504a663a892c80d 429 SUPERFAMILY SSF52440 1 103 2.01E-36 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VSVS12_02988 6044ec5fe67a46ae8504a663a892c80d 429 SMART SM01209 103 296 5.7E-141 T 11-10-2018 VSVS12_02988 6044ec5fe67a46ae8504a663a892c80d 429 Gene3D G3DSA:3.30.470.20 191 329 1.9E-61 T 11-10-2018 VSVS12_02988 6044ec5fe67a46ae8504a663a892c80d 429 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 421 1.5E-27 T 11-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VSVS12_02988 6044ec5fe67a46ae8504a663a892c80d 429 Gene3D G3DSA:3.90.600.10 330 429 1.9E-33 T 11-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VSVS12_02988 6044ec5fe67a46ae8504a663a892c80d 429 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 424 9.0E-184 T 11-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VSVS12_02988 6044ec5fe67a46ae8504a663a892c80d 429 SUPERFAMILY SSF51246 329 423 3.03E-32 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 VSVS12_02988 6044ec5fe67a46ae8504a663a892c80d 429 Gene3D G3DSA:3.30.1490.20 121 190 1.5E-28 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VSVS12_02988 6044ec5fe67a46ae8504a663a892c80d 429 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 1.1E-34 T 11-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VSVS12_02988 6044ec5fe67a46ae8504a663a892c80d 429 SUPERFAMILY SSF56059 104 322 2.12E-66 T 11-10-2018 VSVS12_00005 858d469dc6c6c98289fe6baab9432ba2 125 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 76 87 - T 11-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 VSVS12_00005 858d469dc6c6c98289fe6baab9432ba2 125 Gene3D G3DSA:1.10.3830.10 8 125 7.9E-40 T 11-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 VSVS12_00005 858d469dc6c6c98289fe6baab9432ba2 125 Pfam PF01219 Prokaryotic diacylglycerol kinase 23 123 1.4E-35 T 11-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 VSVS12_00305 5ad817155f65937015122bd8493b5b95 776 Pfam PF09371 Tex-like protein N-terminal domain 9 192 8.4E-71 T 11-10-2018 IPR018974 Tex-like protein, N-terminal VSVS12_00305 5ad817155f65937015122bd8493b5b95 776 SUPERFAMILY SSF50249 638 723 2.39E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_00305 5ad817155f65937015122bd8493b5b95 776 SMART SM00316 649 720 1.2E-25 T 11-10-2018 IPR022967 RNA-binding domain, S1 VSVS12_00305 5ad817155f65937015122bd8493b5b95 776 Pfam PF16921 Tex protein YqgF-like domain 327 451 1.4E-54 T 11-10-2018 IPR032639 Tex protein, YqgF-like domain VSVS12_00305 5ad817155f65937015122bd8493b5b95 776 Gene3D G3DSA:2.40.50.140 631 725 1.8E-29 T 11-10-2018 VSVS12_00305 5ad817155f65937015122bd8493b5b95 776 SUPERFAMILY SSF47781 560 632 1.91E-18 T 11-10-2018 IPR010994 RuvA domain 2-like VSVS12_00305 5ad817155f65937015122bd8493b5b95 776 Pfam PF12836 Helix-hairpin-helix motif 491 555 1.3E-27 T 11-10-2018 VSVS12_00305 5ad817155f65937015122bd8493b5b95 776 SUPERFAMILY SSF53098 322 469 7.13E-51 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_00305 5ad817155f65937015122bd8493b5b95 776 SUPERFAMILY SSF47781 470 557 1.7E-27 T 11-10-2018 IPR010994 RuvA domain 2-like VSVS12_00305 5ad817155f65937015122bd8493b5b95 776 Gene3D G3DSA:1.10.10.650 1 109 2.9E-41 T 11-10-2018 IPR023319 Tex-like protein, HTH domain superfamily VSVS12_00305 5ad817155f65937015122bd8493b5b95 776 Pfam PF00575 S1 RNA binding domain 648 720 2.2E-21 T 11-10-2018 IPR003029 S1 domain GO:0003676 VSVS12_00305 5ad817155f65937015122bd8493b5b95 776 Gene3D G3DSA:1.10.3500.10 112 498 9.3E-155 T 11-10-2018 IPR023323 Tex-like domain superfamily VSVS12_00305 5ad817155f65937015122bd8493b5b95 776 SUPERFAMILY SSF158832 3 321 6.02E-117 T 11-10-2018 VSVS12_00305 5ad817155f65937015122bd8493b5b95 776 Gene3D G3DSA:1.10.150.310 499 630 5.1E-49 T 11-10-2018 VSVS12_00305 5ad817155f65937015122bd8493b5b95 776 Gene3D G3DSA:3.30.420.140 325 451 9.3E-155 T 11-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 VSVS12_00305 5ad817155f65937015122bd8493b5b95 776 SMART SM00732 326 424 1.2E-37 T 11-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 VSVS12_02433 4f7a571d9c822000cf7f2cbb585a442c 452 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 389 446 5.9E-13 T 11-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain VSVS12_02433 4f7a571d9c822000cf7f2cbb585a442c 452 SUPERFAMILY SSF56281 1 445 1.66E-121 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VSVS12_02433 4f7a571d9c822000cf7f2cbb585a442c 452 SMART SM00849 13 221 1.4E-16 T 11-10-2018 IPR001279 Metallo-beta-lactamase VSVS12_02433 4f7a571d9c822000cf7f2cbb585a442c 452 Pfam PF10996 Beta-Casp domain 246 375 2.7E-26 T 11-10-2018 IPR022712 Beta-Casp domain VSVS12_02433 4f7a571d9c822000cf7f2cbb585a442c 452 Gene3D G3DSA:3.60.15.10 6 433 1.5E-130 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VSVS12_02433 4f7a571d9c822000cf7f2cbb585a442c 452 Gene3D G3DSA:3.40.50.10890 214 402 1.5E-130 T 11-10-2018 VSVS12_02433 4f7a571d9c822000cf7f2cbb585a442c 452 Pfam PF00753 Metallo-beta-lactamase superfamily 14 127 9.5E-12 T 11-10-2018 IPR001279 Metallo-beta-lactamase VSVS12_02433 4f7a571d9c822000cf7f2cbb585a442c 452 SMART SM01027 246 376 3.9E-51 T 11-10-2018 IPR022712 Beta-Casp domain VSVS12_00591 7bd6a9e2e1c19c06d19bb915ab0b3a38 279 Pfam PF13401 AAA domain 42 168 8.1E-22 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_00591 7bd6a9e2e1c19c06d19bb915ab0b3a38 279 SUPERFAMILY SSF52540 5 259 7.71E-29 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00591 7bd6a9e2e1c19c06d19bb915ab0b3a38 279 Gene3D G3DSA:3.40.50.300 29 183 3.6E-14 T 11-10-2018 VSVS12_04238 335c209b3769e74dc87d1488a646f08a 348 Pfam PF00267 Gram-negative porin 38 328 2.1E-7 T 11-10-2018 IPR001702 Porin, Gram-negative type GO:0015288|GO:0016020|GO:0055085 VSVS12_04238 335c209b3769e74dc87d1488a646f08a 348 Gene3D G3DSA:2.40.160.10 24 348 7.7E-43 T 11-10-2018 IPR023614 Porin domain superfamily VSVS12_04238 335c209b3769e74dc87d1488a646f08a 348 SUPERFAMILY SSF56935 24 348 5.49E-42 T 11-10-2018 VSVS12_00038 e2b0eb9b0b14d36acd28853bf1f6cc55 276 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 3 276 39.546 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 VSVS12_00038 e2b0eb9b0b14d36acd28853bf1f6cc55 276 SUPERFAMILY SSF54506 2 274 8.41E-53 T 11-10-2018 VSVS12_00038 e2b0eb9b0b14d36acd28853bf1f6cc55 276 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 4 274 8.1E-102 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 VSVS12_00038 e2b0eb9b0b14d36acd28853bf1f6cc55 276 Pfam PF01678 Diaminopimelate epimerase 154 269 1.1E-31 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 VSVS12_00038 e2b0eb9b0b14d36acd28853bf1f6cc55 276 Pfam PF01678 Diaminopimelate epimerase 5 125 6.6E-34 T 11-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 VSVS12_00038 e2b0eb9b0b14d36acd28853bf1f6cc55 276 Gene3D G3DSA:3.10.310.10 117 263 9.0E-105 T 11-10-2018 VSVS12_00038 e2b0eb9b0b14d36acd28853bf1f6cc55 276 Gene3D G3DSA:3.10.310.10 5 272 9.0E-105 T 11-10-2018 VSVS12_00038 e2b0eb9b0b14d36acd28853bf1f6cc55 276 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 66 80 - T 11-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 VSVS12_04132 af3695934369e378fce65d8bf6ab1a71 416 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 26 167 1.2E-34 T 11-10-2018 IPR002178 PTS EIIA type-2 domain VSVS12_04132 af3695934369e378fce65d8bf6ab1a71 416 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 194 397 8.8E-52 T 11-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 VSVS12_04132 af3695934369e378fce65d8bf6ab1a71 416 Gene3D G3DSA:3.40.930.10 16 176 3.7E-42 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VSVS12_04132 af3695934369e378fce65d8bf6ab1a71 416 SUPERFAMILY SSF55804 21 168 2.09E-37 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VSVS12_04132 af3695934369e378fce65d8bf6ab1a71 416 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 28 153 1.2E-37 T 11-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 VSVS12_04132 af3695934369e378fce65d8bf6ab1a71 416 Pfam PF02378 Phosphotransferase system, EIIC 209 391 3.4E-10 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VSVS12_02619 31ea5fa69a99b88f687708cb07285658 272 SUPERFAMILY SSF53807 21 265 7.46E-54 T 11-10-2018 VSVS12_02619 31ea5fa69a99b88f687708cb07285658 272 Pfam PF01497 Periplasmic binding protein 23 244 2.3E-25 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain VSVS12_02619 31ea5fa69a99b88f687708cb07285658 272 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 1 269 47.529 T 11-10-2018 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 VSVS12_02619 31ea5fa69a99b88f687708cb07285658 272 Gene3D G3DSA:3.40.50.1980 140 268 3.6E-29 T 11-10-2018 VSVS12_02619 31ea5fa69a99b88f687708cb07285658 272 Gene3D G3DSA:3.40.50.1980 20 138 5.0E-33 T 11-10-2018 VSVS12_00244 86d67783fb354aa6e33c7a5f0ce93109 328 Hamap MF_01497 Stress response kinase A [srkA]. 4 318 46.663 T 11-10-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 VSVS12_00244 86d67783fb354aa6e33c7a5f0ce93109 328 Gene3D G3DSA:3.30.200.70 13 108 2.4E-122 T 11-10-2018 VSVS12_00244 86d67783fb354aa6e33c7a5f0ce93109 328 Gene3D G3DSA:1.20.1270.170 149 307 2.4E-122 T 11-10-2018 VSVS12_00244 86d67783fb354aa6e33c7a5f0ce93109 328 Pfam PF01636 Phosphotransferase enzyme family 35 256 3.1E-41 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase VSVS12_00244 86d67783fb354aa6e33c7a5f0ce93109 328 SUPERFAMILY SSF56112 6 328 8.51E-89 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily VSVS12_00244 86d67783fb354aa6e33c7a5f0ce93109 328 Gene3D G3DSA:1.10.510.10 60 258 2.4E-122 T 11-10-2018 VSVS12_00651 b5032419f988bf1260cbcdb32c1f10b5 969 Gene3D G3DSA:3.40.50.10810 632 713 3.5E-5 T 11-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily VSVS12_00651 b5032419f988bf1260cbcdb32c1f10b5 969 Gene3D G3DSA:3.40.50.10810 150 430 1.3E-103 T 11-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily VSVS12_00651 b5032419f988bf1260cbcdb32c1f10b5 969 Pfam PF00176 SNF2 family N-terminal domain 174 344 8.0E-15 T 11-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 VSVS12_00651 b5032419f988bf1260cbcdb32c1f10b5 969 SMART SM00490 519 603 2.7E-17 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_00651 b5032419f988bf1260cbcdb32c1f10b5 969 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 967 29.061 T 11-10-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 VSVS12_00651 b5032419f988bf1260cbcdb32c1f10b5 969 Gene3D G3DSA:2.30.30.930 55 114 5.1E-26 T 11-10-2018 VSVS12_00651 b5032419f988bf1260cbcdb32c1f10b5 969 SMART SM00487 150 342 4.7E-14 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VSVS12_00651 b5032419f988bf1260cbcdb32c1f10b5 969 Gene3D G3DSA:3.30.360.80 714 786 3.2E-30 T 11-10-2018 VSVS12_00651 b5032419f988bf1260cbcdb32c1f10b5 969 SUPERFAMILY SSF52540 197 660 5.6E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00651 b5032419f988bf1260cbcdb32c1f10b5 969 SUPERFAMILY SSF52540 113 358 3.61E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00651 b5032419f988bf1260cbcdb32c1f10b5 969 Gene3D G3DSA:2.30.30.140 1 53 6.8E-24 T 11-10-2018 VSVS12_00651 b5032419f988bf1260cbcdb32c1f10b5 969 Pfam PF12137 RNA polymerase recycling family C-terminal 607 966 2.8E-145 T 11-10-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 VSVS12_00651 b5032419f988bf1260cbcdb32c1f10b5 969 Pfam PF00271 Helicase conserved C-terminal domain 494 603 2.5E-15 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_00651 b5032419f988bf1260cbcdb32c1f10b5 969 Gene3D G3DSA:3.40.50.300 431 631 3.4E-46 T 11-10-2018 VSVS12_00827 d034ea6b1447698f10aa0c9081f9f52b 101 PIRSF PIRSF003113 1 98 8.1E-38 T 11-10-2018 IPR002634 BolA protein VSVS12_00827 d034ea6b1447698f10aa0c9081f9f52b 101 SUPERFAMILY SSF82657 1 85 5.1E-31 T 11-10-2018 IPR036065 BolA-like superfamily VSVS12_00827 d034ea6b1447698f10aa0c9081f9f52b 101 Pfam PF01722 BolA-like protein 10 83 3.4E-32 T 11-10-2018 IPR002634 BolA protein VSVS12_00827 d034ea6b1447698f10aa0c9081f9f52b 101 Gene3D G3DSA:3.30.300.90 1 89 1.5E-34 T 11-10-2018 VSVS12_00979 29e315ff8df4dd24379f99071fda29da 262 PRINTS PR01008 Flagellar L-ring protein signature 106 118 6.5E-22 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VSVS12_00979 29e315ff8df4dd24379f99071fda29da 262 PRINTS PR01008 Flagellar L-ring protein signature 204 220 6.5E-22 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VSVS12_00979 29e315ff8df4dd24379f99071fda29da 262 PRINTS PR01008 Flagellar L-ring protein signature 178 193 6.5E-22 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VSVS12_00979 29e315ff8df4dd24379f99071fda29da 262 PRINTS PR01008 Flagellar L-ring protein signature 241 255 6.5E-22 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VSVS12_00979 29e315ff8df4dd24379f99071fda29da 262 PRINTS PR01008 Flagellar L-ring protein signature 225 239 6.5E-22 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VSVS12_00979 29e315ff8df4dd24379f99071fda29da 262 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 262 28.227 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VSVS12_00979 29e315ff8df4dd24379f99071fda29da 262 Pfam PF02107 Flagellar L-ring protein 81 259 6.9E-57 T 11-10-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 VSVS12_00892 e00dd0e216e0a5a7082cbc7bba8f8593 443 Pfam PF13006 Insertion element 4 transposase N-terminal 19 109 5.0E-27 T 11-10-2018 IPR024473 Transposase, IS4, N-terminal VSVS12_00892 e00dd0e216e0a5a7082cbc7bba8f8593 443 Pfam PF01609 Transposase DDE domain 129 352 1.5E-21 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_00892 e00dd0e216e0a5a7082cbc7bba8f8593 443 SUPERFAMILY SSF53098 92 418 2.12E-27 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_00012 9dcc9164bac0671c6d8275454d86219a 285 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VSVS12_00012 9dcc9164bac0671c6d8275454d86219a 285 Gene3D G3DSA:1.10.10.10 211 282 3.3E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_00012 9dcc9164bac0671c6d8275454d86219a 285 SUPERFAMILY SSF88659 197 281 1.4E-17 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VSVS12_00012 9dcc9164bac0671c6d8275454d86219a 285 Pfam PF04542 Sigma-70 region 2 53 122 1.5E-16 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VSVS12_00012 9dcc9164bac0671c6d8275454d86219a 285 Pfam PF00140 Sigma-70 factor, region 1.2 14 40 4.7E-7 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VSVS12_00012 9dcc9164bac0671c6d8275454d86219a 285 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 284 52.763 T 11-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 VSVS12_00012 9dcc9164bac0671c6d8275454d86219a 285 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 15 282 3.2E-125 T 11-10-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003700|GO:0006352|GO:0006355|GO:0016987 VSVS12_00012 9dcc9164bac0671c6d8275454d86219a 285 SUPERFAMILY SSF88946 11 122 4.4E-39 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VSVS12_00012 9dcc9164bac0671c6d8275454d86219a 285 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 280 4.9E-34 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VSVS12_00012 9dcc9164bac0671c6d8275454d86219a 285 PRINTS PR00046 Major sigma-70 factor signature 77 90 5.4E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VSVS12_00012 9dcc9164bac0671c6d8275454d86219a 285 PRINTS PR00046 Major sigma-70 factor signature 233 245 5.4E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VSVS12_00012 9dcc9164bac0671c6d8275454d86219a 285 PRINTS PR00046 Major sigma-70 factor signature 267 278 5.4E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VSVS12_00012 9dcc9164bac0671c6d8275454d86219a 285 PRINTS PR00046 Major sigma-70 factor signature 252 267 5.4E-19 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VSVS12_00012 9dcc9164bac0671c6d8275454d86219a 285 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 252 278 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VSVS12_00012 9dcc9164bac0671c6d8275454d86219a 285 Gene3D G3DSA:1.10.601.10 8 125 1.4E-26 T 11-10-2018 VSVS12_00012 9dcc9164bac0671c6d8275454d86219a 285 Pfam PF04545 Sigma-70, region 4 229 279 8.7E-16 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 VSVS12_02486 86a1f963da7dd082c0d8683c610bf05f 315 SUPERFAMILY SSF82866 73 293 2.49E-41 T 11-10-2018 VSVS12_02486 86a1f963da7dd082c0d8683c610bf05f 315 Pfam PF02355 Protein export membrane protein 113 292 6.9E-68 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VSVS12_02486 86a1f963da7dd082c0d8683c610bf05f 315 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 105 282 2.5E-55 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VSVS12_02486 86a1f963da7dd082c0d8683c610bf05f 315 Pfam PF07549 SecD/SecF GG Motif 35 60 1.6E-10 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VSVS12_02486 86a1f963da7dd082c0d8683c610bf05f 315 PRINTS PR01755 Bacterial translocase SecF protein signature 233 248 1.6E-32 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VSVS12_02486 86a1f963da7dd082c0d8683c610bf05f 315 PRINTS PR01755 Bacterial translocase SecF protein signature 38 53 1.6E-32 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VSVS12_02486 86a1f963da7dd082c0d8683c610bf05f 315 PRINTS PR01755 Bacterial translocase SecF protein signature 201 219 1.6E-32 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VSVS12_02486 86a1f963da7dd082c0d8683c610bf05f 315 PRINTS PR01755 Bacterial translocase SecF protein signature 153 167 1.6E-32 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VSVS12_02486 86a1f963da7dd082c0d8683c610bf05f 315 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 40 285 3.8E-83 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 VSVS12_02486 86a1f963da7dd082c0d8683c610bf05f 315 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 11 296 28.104 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 VSVS12_02486 86a1f963da7dd082c0d8683c610bf05f 315 Gene3D G3DSA:1.20.1640.10 105 300 1.1E-11 T 11-10-2018 VSVS12_03164 978a33be49485619fe0342dedd86d66a 236 SUPERFAMILY SSF51366 1 216 3.3E-38 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VSVS12_03164 978a33be49485619fe0342dedd86d66a 236 Pfam PF00834 Ribulose-phosphate 3 epimerase family 5 207 5.0E-26 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 VSVS12_03164 978a33be49485619fe0342dedd86d66a 236 Gene3D G3DSA:3.20.20.70 4 236 2.3E-36 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_02565 30d8e35589eb1f6e6ad5255415c98a13 452 Pfam PF02875 Mur ligase family, glutamate ligase domain 314 392 2.1E-13 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VSVS12_02565 30d8e35589eb1f6e6ad5255415c98a13 452 Gene3D G3DSA:3.40.1190.10 81 311 1.1E-75 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VSVS12_02565 30d8e35589eb1f6e6ad5255415c98a13 452 Pfam PF01225 Mur ligase family, catalytic domain 23 86 4.6E-11 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 VSVS12_02565 30d8e35589eb1f6e6ad5255415c98a13 452 Pfam PF08245 Mur ligase middle domain 105 293 9.4E-46 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VSVS12_02565 30d8e35589eb1f6e6ad5255415c98a13 452 Gene3D G3DSA:3.40.1390.10 1 80 1.4E-29 T 11-10-2018 VSVS12_02565 30d8e35589eb1f6e6ad5255415c98a13 452 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 448 33.459 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VSVS12_02565 30d8e35589eb1f6e6ad5255415c98a13 452 SUPERFAMILY SSF53244 314 447 6.1E-34 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VSVS12_02565 30d8e35589eb1f6e6ad5255415c98a13 452 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 447 3.2E-138 T 11-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VSVS12_02565 30d8e35589eb1f6e6ad5255415c98a13 452 SUPERFAMILY SSF63418 1 96 1.31E-26 T 11-10-2018 IPR035911 MurE/MurF, N-terminal VSVS12_02565 30d8e35589eb1f6e6ad5255415c98a13 452 Gene3D G3DSA:3.90.190.20 313 451 6.7E-36 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VSVS12_02565 30d8e35589eb1f6e6ad5255415c98a13 452 SUPERFAMILY SSF53623 101 309 1.27E-54 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VSVS12_03914 876d6d996a670c7674d5f206dc70a6ab 342 Pfam PF11667 Putative zincin peptidase 135 223 8.6E-7 T 11-10-2018 IPR021683 Putative zincin peptidase VSVS12_02534 89b7deec81f02b454bfa125b2f12f960 406 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 403 1.3E-176 T 11-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 VSVS12_02534 89b7deec81f02b454bfa125b2f12f960 406 SUPERFAMILY SSF143856 118 234 5.23E-47 T 11-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 VSVS12_02534 89b7deec81f02b454bfa125b2f12f960 406 PIRSF PIRSF001491 1 406 8.1E-158 T 11-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 VSVS12_02534 89b7deec81f02b454bfa125b2f12f960 406 SUPERFAMILY SSF53649 1 406 4.06E-67 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VSVS12_02534 89b7deec81f02b454bfa125b2f12f960 406 Pfam PF01676 Metalloenzyme superfamily 2 396 1.4E-42 T 11-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 VSVS12_02534 89b7deec81f02b454bfa125b2f12f960 406 Hamap MF_00740 Phosphopentomutase [deoB]. 1 406 53.343 T 11-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 VSVS12_02534 89b7deec81f02b454bfa125b2f12f960 406 Gene3D G3DSA:3.30.70.1250 113 234 2.2E-145 T 11-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 VSVS12_02534 89b7deec81f02b454bfa125b2f12f960 406 Gene3D G3DSA:3.40.720.10 2 406 2.2E-145 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VSVS12_00006 dd389e9a89bfdc14785c1009b2d294d7 818 PIRSF PIRSF500064 3 813 0.0 T 11-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 VSVS12_00006 dd389e9a89bfdc14785c1009b2d294d7 818 PIRSF PIRSF000437 19 813 1.4E-304 T 11-10-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 VSVS12_00006 dd389e9a89bfdc14785c1009b2d294d7 818 SUPERFAMILY SSF69593 238 488 4.05E-25 T 11-10-2018 VSVS12_00006 dd389e9a89bfdc14785c1009b2d294d7 818 SMART SM00563 300 427 3.8E-26 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VSVS12_00006 dd389e9a89bfdc14785c1009b2d294d7 818 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 799 0.0 T 11-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 VSVS12_00006 dd389e9a89bfdc14785c1009b2d294d7 818 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 807 31.209 T 11-10-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109|Reactome: R-HSA-8931987|Reactome: R-HSA-9018519 VSVS12_00006 dd389e9a89bfdc14785c1009b2d294d7 818 Pfam PF01553 Acyltransferase 289 424 2.3E-22 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VSVS12_02659 37869b153706d4dd0a6707d9dd689e43 326 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 320 42.81 T 11-10-2018 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 VSVS12_02659 37869b153706d4dd0a6707d9dd689e43 326 PIRSF PIRSF006487 20 270 1.1E-7 T 11-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 VSVS12_02659 37869b153706d4dd0a6707d9dd689e43 326 Gene3D G3DSA:3.30.70.1630 26 192 3.9E-42 T 11-10-2018 VSVS12_02659 37869b153706d4dd0a6707d9dd689e43 326 SUPERFAMILY SSF103025 19 240 2.83E-58 T 11-10-2018 VSVS12_02659 37869b153706d4dd0a6707d9dd689e43 326 Gene3D G3DSA:3.30.70.1400 29 115 3.9E-42 T 11-10-2018 VSVS12_02659 37869b153706d4dd0a6707d9dd689e43 326 Gene3D G3DSA:2.40.30.160 195 314 2.4E-34 T 11-10-2018 VSVS12_02659 37869b153706d4dd0a6707d9dd689e43 326 Pfam PF01571 Aminomethyltransferase folate-binding domain 30 156 2.0E-7 T 11-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain VSVS12_02659 37869b153706d4dd0a6707d9dd689e43 326 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 186 250 2.1E-25 T 11-10-2018 IPR017703 YgfZ/GcvT conserved site VSVS12_02659 37869b153706d4dd0a6707d9dd689e43 326 SUPERFAMILY SSF101790 242 324 4.84E-21 T 11-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal VSVS12_03719 76ddb16a21ba17a743bf5df8d64fc757 445 SUPERFAMILY SSF56935 26 445 6.71E-85 T 11-10-2018 VSVS12_03719 76ddb16a21ba17a743bf5df8d64fc757 445 Gene3D G3DSA:2.40.170.10 25 445 8.4E-107 T 11-10-2018 IPR036998 Porin, LamB-type superfamily GO:0015288|GO:0016020|GO:0034219 VSVS12_03719 76ddb16a21ba17a743bf5df8d64fc757 445 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 32 433 7.0E-49 T 11-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 VSVS12_03719 76ddb16a21ba17a743bf5df8d64fc757 445 Pfam PF02264 LamB porin 27 445 2.9E-86 T 11-10-2018 IPR003192 Porin, LamB-type GO:0015288|GO:0016020|GO:0034219 VSVS12_04218 55eee90769bf7eba57d7296e6114300e 302 PRINTS PR00069 Aldo-keto reductase signature 145 162 3.0E-7 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 VSVS12_04218 55eee90769bf7eba57d7296e6114300e 302 PRINTS PR00069 Aldo-keto reductase signature 114 132 3.0E-7 T 11-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 VSVS12_04218 55eee90769bf7eba57d7296e6114300e 302 SUPERFAMILY SSF51430 5 295 4.71E-69 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VSVS12_04218 55eee90769bf7eba57d7296e6114300e 302 Gene3D G3DSA:3.20.20.100 1 302 2.0E-99 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VSVS12_04218 55eee90769bf7eba57d7296e6114300e 302 Pfam PF00248 Aldo/keto reductase family 16 292 1.8E-58 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain VSVS12_02521 bb570f9352a93b9631b5966dee1007b0 66 Pfam PF04964 Flp/Fap pilin component 16 64 2.0E-9 T 11-10-2018 IPR007047 Flp/Fap pilin component VSVS12_02601 41da2f28784d10733bf4c48f5ea01844 412 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 3 411 49.786 T 11-10-2018 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 VSVS12_02601 41da2f28784d10733bf4c48f5ea01844 412 SMART SM00490 257 341 4.8E-32 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_02601 41da2f28784d10733bf4c48f5ea01844 412 Gene3D G3DSA:3.40.50.300 216 412 4.8E-52 T 11-10-2018 VSVS12_02601 41da2f28784d10733bf4c48f5ea01844 412 Pfam PF00271 Helicase conserved C-terminal domain 234 341 8.2E-32 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_02601 41da2f28784d10733bf4c48f5ea01844 412 Pfam PF00270 DEAD/DEAH box helicase 27 195 7.6E-45 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VSVS12_02601 41da2f28784d10733bf4c48f5ea01844 412 Gene3D G3DSA:3.40.50.300 1 211 2.1E-71 T 11-10-2018 VSVS12_02601 41da2f28784d10733bf4c48f5ea01844 412 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VSVS12_02601 41da2f28784d10733bf4c48f5ea01844 412 SMART SM00487 22 224 9.0E-55 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VSVS12_02601 41da2f28784d10733bf4c48f5ea01844 412 SUPERFAMILY SSF52540 76 358 6.69E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02955 1eb8c4df2501d48d66708b3ecacf3155 188 SMART SM01185 69 123 1.3E-25 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 VSVS12_02955 1eb8c4df2501d48d66708b3ecacf3155 188 SUPERFAMILY SSF50249 130 187 9.25E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_02955 1eb8c4df2501d48d66708b3ecacf3155 188 SUPERFAMILY SSF50249 70 128 6.0E-17 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_02955 1eb8c4df2501d48d66708b3ecacf3155 188 Gene3D G3DSA:2.30.30.30 1 64 1.6E-26 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 VSVS12_02955 1eb8c4df2501d48d66708b3ecacf3155 188 SMART SM00841 131 186 2.3E-30 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 VSVS12_02955 1eb8c4df2501d48d66708b3ecacf3155 188 PIRSF PIRSF005901 2 188 2.2E-64 T 11-10-2018 IPR020599 Translation elongation factor P/YeiP VSVS12_02955 1eb8c4df2501d48d66708b3ecacf3155 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 11-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site VSVS12_02955 1eb8c4df2501d48d66708b3ecacf3155 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 1.1E-24 T 11-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 VSVS12_02955 1eb8c4df2501d48d66708b3ecacf3155 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 71 123 1.3E-22 T 11-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 VSVS12_02955 1eb8c4df2501d48d66708b3ecacf3155 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 5 62 8.5E-25 T 11-10-2018 IPR013185 Translation elongation factor, KOW-like VSVS12_02955 1eb8c4df2501d48d66708b3ecacf3155 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 48.916 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 VSVS12_02955 1eb8c4df2501d48d66708b3ecacf3155 188 SUPERFAMILY SSF50104 2 64 1.65E-20 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily VSVS12_02955 1eb8c4df2501d48d66708b3ecacf3155 188 Gene3D G3DSA:2.40.50.140 130 188 6.4E-27 T 11-10-2018 VSVS12_02955 1eb8c4df2501d48d66708b3ecacf3155 188 TIGRFAM TIGR00038 efp: translation elongation factor P 5 187 1.2E-76 T 11-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 VSVS12_02955 1eb8c4df2501d48d66708b3ecacf3155 188 Gene3D G3DSA:2.40.50.140 66 127 9.7E-29 T 11-10-2018 VSVS12_03196 60c66c84e97e244cad167d1b29ed76fe 565 Gene3D G3DSA:3.40.50.12740 1 164 4.9E-32 T 11-10-2018 VSVS12_03196 60c66c84e97e244cad167d1b29ed76fe 565 Gene3D G3DSA:3.30.565.10 401 560 9.0E-6 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_03196 60c66c84e97e244cad167d1b29ed76fe 565 SMART SM00331 165 378 7.1E-9 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VSVS12_03196 60c66c84e97e244cad167d1b29ed76fe 565 Pfam PF00072 Response regulator receiver domain 3 115 2.5E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_03196 60c66c84e97e244cad167d1b29ed76fe 565 SMART SM00448 1 115 8.8E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_03196 60c66c84e97e244cad167d1b29ed76fe 565 Pfam PF13581 Histidine kinase-like ATPase domain 435 550 1.8E-6 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_03196 60c66c84e97e244cad167d1b29ed76fe 565 SUPERFAMILY SSF52172 1 147 6.55E-31 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_03196 60c66c84e97e244cad167d1b29ed76fe 565 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 192 378 7.1E-34 T 11-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VSVS12_03196 60c66c84e97e244cad167d1b29ed76fe 565 Gene3D G3DSA:3.60.40.10 165 395 1.5E-33 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VSVS12_00721 b22accd5c7f4e3884f209939131a5040 475 Gene3D G3DSA:3.50.80.20 82 175 8.6E-14 T 11-10-2018 VSVS12_00721 b22accd5c7f4e3884f209939131a5040 475 Gene3D G3DSA:3.40.710.10 236 468 3.4E-50 T 11-10-2018 VSVS12_00721 b22accd5c7f4e3884f209939131a5040 475 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 51 436 3.4E-95 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VSVS12_00721 b22accd5c7f4e3884f209939131a5040 475 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 31 437 5.7E-95 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VSVS12_00721 b22accd5c7f4e3884f209939131a5040 475 SUPERFAMILY SSF56601 26 439 3.65E-80 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VSVS12_00721 b22accd5c7f4e3884f209939131a5040 475 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 414 427 2.2E-24 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VSVS12_00721 b22accd5c7f4e3884f209939131a5040 475 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 58 77 2.2E-24 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VSVS12_00721 b22accd5c7f4e3884f209939131a5040 475 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 335 349 2.2E-24 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VSVS12_00721 b22accd5c7f4e3884f209939131a5040 475 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 276 298 2.2E-24 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VSVS12_00721 b22accd5c7f4e3884f209939131a5040 475 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 350 364 2.2E-24 T 11-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VSVS12_02454 adde6c4dd1a63dd92a87440625414639 269 Pfam PF00899 ThiF family 23 208 4.7E-39 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VSVS12_02454 adde6c4dd1a63dd92a87440625414639 269 SUPERFAMILY SSF69572 9 267 1.7E-65 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 VSVS12_02454 adde6c4dd1a63dd92a87440625414639 269 Gene3D G3DSA:3.40.50.720 5 269 2.5E-110 T 11-10-2018 VSVS12_04003 37e1aa6f304e1057d9cc0be21a6db34d 324 Pfam PF08908 Domain of unknown function (DUF1852) 1 320 5.7E-179 T 11-10-2018 IPR015004 Protein of unknown function DUF1852 VSVS12_04003 37e1aa6f304e1057d9cc0be21a6db34d 324 PIRSF PIRSF034367 1 324 3.9E-189 T 11-10-2018 IPR015004 Protein of unknown function DUF1852 VSVS12_00764 79b7144c3e3a78437090564fc42a1579 317 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 288 37.52 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 VSVS12_00764 79b7144c3e3a78437090564fc42a1579 317 Pfam PF02401 LytB protein 3 284 2.6E-91 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 VSVS12_00764 79b7144c3e3a78437090564fc42a1579 317 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 286 4.7E-95 T 11-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 VSVS12_00764 79b7144c3e3a78437090564fc42a1579 317 Gene3D G3DSA:3.40.1010.20 6 282 4.8E-107 T 11-10-2018 VSVS12_00764 79b7144c3e3a78437090564fc42a1579 317 Gene3D G3DSA:3.40.1010.20 97 198 4.8E-107 T 11-10-2018 VSVS12_00764 79b7144c3e3a78437090564fc42a1579 317 Gene3D G3DSA:3.40.50.11270 12 96 4.8E-107 T 11-10-2018 VSVS12_02778 ab238e4d65a36fdd16957068020da3d7 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 13 203 1.5E-67 T 11-10-2018 VSVS12_02778 ab238e4d65a36fdd16957068020da3d7 208 Gene3D G3DSA:3.40.50.150 2 206 4.6E-73 T 11-10-2018 VSVS12_02778 ab238e4d65a36fdd16957068020da3d7 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 37.839 T 11-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 VSVS12_02778 ab238e4d65a36fdd16957068020da3d7 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 14 206 1.7E-77 T 11-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 VSVS12_02778 ab238e4d65a36fdd16957068020da3d7 208 SUPERFAMILY SSF53335 7 204 5.98E-45 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_02778 ab238e4d65a36fdd16957068020da3d7 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 11-10-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 VSVS12_01039 a013dea79650e541d7a35d792a5d90f3 731 SUPERFAMILY SSF56349 351 538 1.21E-10 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VSVS12_01039 a013dea79650e541d7a35d792a5d90f3 731 Pfam PF00589 Phage integrase family 349 539 8.7E-8 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VSVS12_01039 a013dea79650e541d7a35d792a5d90f3 731 Gene3D G3DSA:1.10.443.10 333 565 2.9E-11 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VSVS12_03850 eb1b429045350a34356b64da94609988 151 Pfam PF02142 MGS-like domain 25 118 1.3E-18 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain VSVS12_03850 eb1b429045350a34356b64da94609988 151 Gene3D G3DSA:3.40.50.1380 1 151 1.4E-66 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VSVS12_03850 eb1b429045350a34356b64da94609988 151 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 150 5.1E-65 T 11-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 VSVS12_03850 eb1b429045350a34356b64da94609988 151 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 73 - T 11-10-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 VSVS12_03850 eb1b429045350a34356b64da94609988 151 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 32.878 T 11-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 VSVS12_03850 eb1b429045350a34356b64da94609988 151 SMART SM00851 25 118 4.2E-23 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain VSVS12_03850 eb1b429045350a34356b64da94609988 151 PIRSF PIRSF006614 8 151 3.5E-64 T 11-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 VSVS12_03850 eb1b429045350a34356b64da94609988 151 SUPERFAMILY SSF52335 3 150 3.97E-58 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VSVS12_01418 a5ab71012649376efc7de9d2960f5bd5 206 SUPERFAMILY SSF55821 1 203 3.66E-64 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VSVS12_01418 a5ab71012649376efc7de9d2960f5bd5 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 200 2.0E-70 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 VSVS12_01418 a5ab71012649376efc7de9d2960f5bd5 206 Gene3D G3DSA:3.90.870.10 1 205 2.4E-68 T 11-10-2018 VSVS12_01418 a5ab71012649376efc7de9d2960f5bd5 206 Pfam PF01300 Telomere recombination 23 198 3.6E-46 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 VSVS12_00566 79853131ada09c8e4146cfe77cd7527d 90 Pfam PF04362 Bacterial Fe(2+) trafficking 1 88 5.5E-43 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VSVS12_00566 79853131ada09c8e4146cfe77cd7527d 90 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 28.606 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VSVS12_00566 79853131ada09c8e4146cfe77cd7527d 90 Gene3D G3DSA:1.10.3880.10 1 90 4.4E-40 T 11-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 VSVS12_00566 79853131ada09c8e4146cfe77cd7527d 90 SUPERFAMILY SSF111148 1 89 2.88E-41 T 11-10-2018 IPR036766 Fe(II) trafficking protein YggX superfamily GO:0005506 VSVS12_00566 79853131ada09c8e4146cfe77cd7527d 90 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 2.0E-36 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VSVS12_00566 79853131ada09c8e4146cfe77cd7527d 90 PIRSF PIRSF029827 1 90 6.2E-44 T 11-10-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 VSVS12_00506 2b504aca325479c601a7c4d0665fcc7c 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 57.91 T 11-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 VSVS12_00506 2b504aca325479c601a7c4d0665fcc7c 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 1.9E-163 T 11-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 VSVS12_00506 2b504aca325479c601a7c4d0665fcc7c 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 6.5E-64 T 11-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 VSVS12_00506 2b504aca325479c601a7c4d0665fcc7c 302 PIRSF PIRSF002936 1 302 3.3E-156 T 11-10-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 VSVS12_00506 2b504aca325479c601a7c4d0665fcc7c 302 SUPERFAMILY SSF52402 6 209 3.26E-74 T 11-10-2018 VSVS12_00506 2b504aca325479c601a7c4d0665fcc7c 302 Gene3D G3DSA:3.40.50.620 7 212 3.9E-65 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VSVS12_02956 757b9b514332d453da35889de1b9cfaa 340 TIGRFAM TIGR00238 TIGR00238: KamA family protein 13 328 8.2E-123 T 11-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase VSVS12_02956 757b9b514332d453da35889de1b9cfaa 340 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 16 335 2.0E-154 T 11-10-2018 IPR022462 Lysine-2,3-aminomutase-like VSVS12_02956 757b9b514332d453da35889de1b9cfaa 340 Pfam PF04055 Radical SAM superfamily 117 231 1.8E-7 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VSVS12_02956 757b9b514332d453da35889de1b9cfaa 340 Pfam PF13353 4Fe-4S single cluster domain 115 180 6.8E-6 T 11-10-2018 VSVS12_02956 757b9b514332d453da35889de1b9cfaa 340 PIRSF PIRSF004911 3 340 1.3E-111 T 11-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase VSVS12_02956 757b9b514332d453da35889de1b9cfaa 340 SUPERFAMILY SSF102114 102 324 1.83E-23 T 11-10-2018 VSVS12_02956 757b9b514332d453da35889de1b9cfaa 340 Gene3D G3DSA:3.20.20.70 51 334 1.8E-87 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_02535 fa50e4f39e33977d595c67ca7ea02526 442 Hamap MF_01628 Thymidine phosphorylase [deoA]. 2 437 45.237 T 11-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 VSVS12_02535 fa50e4f39e33977d595c67ca7ea02526 442 SMART SM00941 350 424 2.1E-29 T 11-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VSVS12_02535 fa50e4f39e33977d595c67ca7ea02526 442 Gene3D G3DSA:3.90.1170.30 337 432 2.0E-30 T 11-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VSVS12_02535 fa50e4f39e33977d595c67ca7ea02526 442 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 11-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VSVS12_02535 fa50e4f39e33977d595c67ca7ea02526 442 Pfam PF00591 Glycosyl transferase family, a/b domain 80 309 1.9E-48 T 11-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VSVS12_02535 fa50e4f39e33977d595c67ca7ea02526 442 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 350 423 2.1E-24 T 11-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VSVS12_02535 fa50e4f39e33977d595c67ca7ea02526 442 SUPERFAMILY SSF52418 73 334 3.27E-88 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VSVS12_02535 fa50e4f39e33977d595c67ca7ea02526 442 SUPERFAMILY SSF54680 337 436 6.15E-30 T 11-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VSVS12_02535 fa50e4f39e33977d595c67ca7ea02526 442 SUPERFAMILY SSF47648 2 70 7.06E-21 T 11-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VSVS12_02535 fa50e4f39e33977d595c67ca7ea02526 442 PIRSF PIRSF000478 1 439 8.5E-151 T 11-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 VSVS12_02535 fa50e4f39e33977d595c67ca7ea02526 442 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 9.1E-20 T 11-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 VSVS12_02535 fa50e4f39e33977d595c67ca7ea02526 442 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 423 2.2E-161 T 11-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 VSVS12_02535 fa50e4f39e33977d595c67ca7ea02526 442 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 3 427 4.6E-213 T 11-10-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 VSVS12_02535 fa50e4f39e33977d595c67ca7ea02526 442 Gene3D G3DSA:3.40.1030.10 70 322 5.6E-127 T 11-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 VSVS12_02535 fa50e4f39e33977d595c67ca7ea02526 442 Gene3D G3DSA:1.20.970.10 7 195 5.6E-127 T 11-10-2018 VSVS12_01091 d27ec303d1030292c4d0e7867398a71c 313 Pfam PF02779 Transketolase, pyrimidine binding domain 8 168 1.1E-24 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VSVS12_01091 d27ec303d1030292c4d0e7867398a71c 313 SUPERFAMILY SSF52518 4 169 3.21E-42 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold VSVS12_01091 d27ec303d1030292c4d0e7867398a71c 313 Pfam PF02780 Transketolase, C-terminal domain 179 302 1.1E-24 T 11-10-2018 IPR033248 Transketolase, C-terminal domain VSVS12_01091 d27ec303d1030292c4d0e7867398a71c 313 SUPERFAMILY SSF52922 175 311 2.36E-29 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VSVS12_01091 d27ec303d1030292c4d0e7867398a71c 313 SMART SM00861 3 168 4.9E-33 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VSVS12_01091 d27ec303d1030292c4d0e7867398a71c 313 Gene3D G3DSA:3.40.50.920 179 312 4.0E-34 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VSVS12_01091 d27ec303d1030292c4d0e7867398a71c 313 Gene3D G3DSA:3.40.50.970 1 178 2.8E-49 T 11-10-2018 VSVS12_00199 d3cb23aca9ca8dcfbe8f303bb3c66e01 453 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 4 453 32.942 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 VSVS12_00199 d3cb23aca9ca8dcfbe8f303bb3c66e01 453 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 218 238 7.4E-5 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 VSVS12_00199 d3cb23aca9ca8dcfbe8f303bb3c66e01 453 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 282 7.4E-5 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 VSVS12_00199 d3cb23aca9ca8dcfbe8f303bb3c66e01 453 Pfam PF12631 MnmE helical domain 122 450 3.4E-61 T 11-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 VSVS12_00199 d3cb23aca9ca8dcfbe8f303bb3c66e01 453 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 215 370 1.7E-23 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VSVS12_00199 d3cb23aca9ca8dcfbe8f303bb3c66e01 453 Pfam PF01926 50S ribosome-binding GTPase 217 306 4.5E-24 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 VSVS12_00199 d3cb23aca9ca8dcfbe8f303bb3c66e01 453 Gene3D G3DSA:3.40.50.300 216 381 3.2E-103 T 11-10-2018 VSVS12_00199 d3cb23aca9ca8dcfbe8f303bb3c66e01 453 Gene3D G3DSA:1.20.120.430 121 453 3.2E-103 T 11-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 VSVS12_00199 d3cb23aca9ca8dcfbe8f303bb3c66e01 453 Pfam PF10396 GTP-binding protein TrmE N-terminus 5 119 1.9E-34 T 11-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 VSVS12_00199 d3cb23aca9ca8dcfbe8f303bb3c66e01 453 SUPERFAMILY SSF52540 70 371 1.73E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00199 d3cb23aca9ca8dcfbe8f303bb3c66e01 453 SUPERFAMILY SSF116878 120 453 4.32E-52 T 11-10-2018 VSVS12_00199 d3cb23aca9ca8dcfbe8f303bb3c66e01 453 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 10 453 1.4E-99 T 11-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 VSVS12_00199 d3cb23aca9ca8dcfbe8f303bb3c66e01 453 Gene3D G3DSA:3.30.1360.120 1 120 4.0E-38 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 VSVS12_04161 87eb24102afba566c0304201964e456c 421 Gene3D G3DSA:1.20.1740.10 2 416 7.0E-55 T 11-10-2018 VSVS12_04161 87eb24102afba566c0304201964e456c 421 PIRSF PIRSF006060 1 413 2.3E-51 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VSVS12_04161 87eb24102afba566c0304201964e456c 421 Pfam PF13520 Amino acid permease 10 373 1.1E-28 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VSVS12_02603 8051d55775d1c3fbb53918b0e024ccf4 149 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 12 143 2.1E-38 T 11-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 VSVS12_02603 8051d55775d1c3fbb53918b0e024ccf4 149 Pfam PF00583 Acetyltransferase (GNAT) family 29 121 8.3E-14 T 11-10-2018 IPR000182 GNAT domain VSVS12_02603 8051d55775d1c3fbb53918b0e024ccf4 149 SUPERFAMILY SSF55729 1 145 1.56E-30 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_02603 8051d55775d1c3fbb53918b0e024ccf4 149 Gene3D G3DSA:3.40.630.30 6 147 8.2E-40 T 11-10-2018 VSVS12_03086 eb343766102c5dc31ea8b3abd190e36f 706 Gene3D G3DSA:2.60.40.10 1 200 5.0E-45 T 11-10-2018 IPR013783 Immunoglobulin-like fold VSVS12_03086 eb343766102c5dc31ea8b3abd190e36f 706 SUPERFAMILY SSF81296 118 173 1.4E-5 T 11-10-2018 IPR014756 Immunoglobulin E-set VSVS12_03086 eb343766102c5dc31ea8b3abd190e36f 706 Gene3D G3DSA:2.60.40.1180 603 705 1.2E-30 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta VSVS12_03086 eb343766102c5dc31ea8b3abd190e36f 706 SMART SM00642 230 574 2.9E-6 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VSVS12_03086 eb343766102c5dc31ea8b3abd190e36f 706 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 608 705 4.2E-18 T 11-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 VSVS12_03086 eb343766102c5dc31ea8b3abd190e36f 706 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 111 187 4.8E-19 T 11-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 VSVS12_03086 eb343766102c5dc31ea8b3abd190e36f 706 SUPERFAMILY SSF51445 159 596 1.56E-112 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily VSVS12_03086 eb343766102c5dc31ea8b3abd190e36f 706 Pfam PF00128 Alpha amylase, catalytic domain 255 329 1.9E-6 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VSVS12_03086 eb343766102c5dc31ea8b3abd190e36f 706 Gene3D G3DSA:3.20.20.80 204 602 3.8E-162 T 11-10-2018 VSVS12_03086 eb343766102c5dc31ea8b3abd190e36f 706 PIRSF PIRSF000463 1 706 1.1E-278 T 11-10-2018 IPR037439 1,4-alpha-glucan-branching enzyme GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900|Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 VSVS12_03086 eb343766102c5dc31ea8b3abd190e36f 706 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 71 706 41.12 T 11-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 VSVS12_03086 eb343766102c5dc31ea8b3abd190e36f 706 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 96 702 8.7E-246 T 11-10-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 VSVS12_03086 eb343766102c5dc31ea8b3abd190e36f 706 SUPERFAMILY SSF51011 603 705 2.88E-29 T 11-10-2018 VSVS12_03086 eb343766102c5dc31ea8b3abd190e36f 706 SUPERFAMILY SSF81296 2 82 2.6E-10 T 11-10-2018 IPR014756 Immunoglobulin E-set VSVS12_02630 124fa91237696ee82fd4b4a578bcf205 418 SUPERFAMILY SSF58104 109 418 1.31E-75 T 11-10-2018 VSVS12_02630 124fa91237696ee82fd4b4a578bcf205 418 SMART SM00283 156 417 1.1E-70 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_02630 124fa91237696ee82fd4b4a578bcf205 418 Gene3D G3DSA:1.10.287.950 90 418 8.3E-71 T 11-10-2018 VSVS12_02630 124fa91237696ee82fd4b4a578bcf205 418 SMART SM00304 89 141 1.9E-5 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_02630 124fa91237696ee82fd4b4a578bcf205 418 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 202 384 1.4E-42 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_00600 afb94bc169c69e6f183a1ce7b3dde59e 155 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 29 1.2E-5 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_00600 afb94bc169c69e6f183a1ce7b3dde59e 155 Gene3D G3DSA:3.30.700.10 9 152 3.0E-5 T 11-10-2018 VSVS12_00600 afb94bc169c69e6f183a1ce7b3dde59e 155 Pfam PF07963 Prokaryotic N-terminal methylation motif 8 28 5.6E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_00600 afb94bc169c69e6f183a1ce7b3dde59e 155 SUPERFAMILY SSF54523 9 152 4.79E-10 T 11-10-2018 VSVS12_01868 5a06a9093fdf71f3309f39f72348172e 332 Gene3D G3DSA:3.40.50.2300 155 332 8.3E-44 T 11-10-2018 VSVS12_01868 5a06a9093fdf71f3309f39f72348172e 332 Gene3D G3DSA:1.10.260.40 1 57 3.2E-22 T 11-10-2018 VSVS12_01868 5a06a9093fdf71f3309f39f72348172e 332 Pfam PF13377 Periplasmic binding protein-like domain 169 329 3.3E-32 T 11-10-2018 VSVS12_01868 5a06a9093fdf71f3309f39f72348172e 332 SUPERFAMILY SSF53822 61 330 7.74E-57 T 11-10-2018 IPR028082 Periplasmic binding protein-like I VSVS12_01868 5a06a9093fdf71f3309f39f72348172e 332 Gene3D G3DSA:3.40.50.2300 58 150 5.8E-12 T 11-10-2018 VSVS12_01868 5a06a9093fdf71f3309f39f72348172e 332 SUPERFAMILY SSF47413 1 59 1.13E-16 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VSVS12_01868 5a06a9093fdf71f3309f39f72348172e 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.1E-19 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VSVS12_01868 5a06a9093fdf71f3309f39f72348172e 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 9.1E-6 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VSVS12_01868 5a06a9093fdf71f3309f39f72348172e 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 9.1E-6 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VSVS12_01868 5a06a9093fdf71f3309f39f72348172e 332 SMART SM00354 1 71 3.6E-34 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VSVS12_02163 4896f707eeda2f1748af058df9fcccc0 273 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 180 2.7E-8 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 VSVS12_02163 4896f707eeda2f1748af058df9fcccc0 273 SUPERFAMILY SSF51735 8 265 2.57E-19 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_02163 4896f707eeda2f1748af058df9fcccc0 273 Gene3D G3DSA:3.40.50.720 1 272 1.7E-38 T 11-10-2018 VSVS12_01136 b44d8885fb666b97bc7c62024b2ac2e8 235 Pfam PF00106 short chain dehydrogenase 3 190 8.2E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01136 b44d8885fb666b97bc7c62024b2ac2e8 235 SUPERFAMILY SSF51735 3 235 2.79E-49 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_01136 b44d8885fb666b97bc7c62024b2ac2e8 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 66 77 3.3E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01136 b44d8885fb666b97bc7c62024b2ac2e8 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 3.3E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01136 b44d8885fb666b97bc7c62024b2ac2e8 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 3.3E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01136 b44d8885fb666b97bc7c62024b2ac2e8 235 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 3.3E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01136 b44d8885fb666b97bc7c62024b2ac2e8 235 Gene3D G3DSA:3.40.50.720 3 235 3.7E-43 T 11-10-2018 VSVS12_00007 93e20949549dcedc8ccfdf3d89150c64 284 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 1 284 29.674 T 11-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 VSVS12_00007 93e20949549dcedc8ccfdf3d89150c64 284 Gene3D G3DSA:1.10.357.140 18 178 2.8E-43 T 11-10-2018 VSVS12_00007 93e20949549dcedc8ccfdf3d89150c64 284 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 7 283 3.3E-104 T 11-10-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase-like GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 VSVS12_00007 93e20949549dcedc8ccfdf3d89150c64 284 Pfam PF01040 UbiA prenyltransferase family 24 266 9.8E-68 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 VSVS12_01367 547aa38187deb2ae3b51a04ad935e28e 335 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 328 39.751 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 VSVS12_01367 547aa38187deb2ae3b51a04ad935e28e 335 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 24 326 8.7E-96 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 VSVS12_01367 547aa38187deb2ae3b51a04ad935e28e 335 SUPERFAMILY SSF52540 51 172 3.58E-10 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01367 547aa38187deb2ae3b51a04ad935e28e 335 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 18 322 1.0E-110 T 11-10-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00540+2.7.1.130 VSVS12_01238 2fe61c9a5869ffc4479d63f55871625f 341 PIRSF PIRSF002465 2 339 6.8E-123 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 VSVS12_01238 2fe61c9a5869ffc4479d63f55871625f 341 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 335 3.1E-105 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 VSVS12_01238 2fe61c9a5869ffc4479d63f55871625f 341 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 340 135.535 T 11-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 VSVS12_01238 2fe61c9a5869ffc4479d63f55871625f 341 SUPERFAMILY SSF53659 4 336 3.08E-101 T 11-10-2018 VSVS12_01238 2fe61c9a5869ffc4479d63f55871625f 341 Gene3D G3DSA:3.40.718.10 2 340 1.2E-118 T 11-10-2018 VSVS12_01238 2fe61c9a5869ffc4479d63f55871625f 341 Pfam PF02504 Fatty acid synthesis protein 5 327 1.1E-99 T 11-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 VSVS12_00675 899190621f89dde81a18089a75c32fcd 406 Pfam PF00916 Sulfate permease family 5 226 2.1E-44 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 VSVS12_00675 899190621f89dde81a18089a75c32fcd 406 Gene3D G3DSA:3.30.750.24 278 400 2.3E-14 T 11-10-2018 IPR036513 STAS domain superfamily VSVS12_00675 899190621f89dde81a18089a75c32fcd 406 SUPERFAMILY SSF52091 289 392 1.63E-11 T 11-10-2018 IPR036513 STAS domain superfamily VSVS12_00675 899190621f89dde81a18089a75c32fcd 406 Pfam PF01740 STAS domain 290 382 2.1E-9 T 11-10-2018 IPR002645 STAS domain VSVS12_04473 36f8bc184e4d71ae0e9f634c9a548da7 112 Gene3D G3DSA:1.10.260.40 1 69 3.6E-6 T 11-10-2018 VSVS12_04473 36f8bc184e4d71ae0e9f634c9a548da7 112 SUPERFAMILY SSF47413 4 58 1.21E-6 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VSVS12_02297 6926a588b56de60414fc73e5b24dbd33 348 SUPERFAMILY SSF103039 4 229 1.67E-20 T 11-10-2018 IPR028976 CheC-like superfamily VSVS12_02297 6926a588b56de60414fc73e5b24dbd33 348 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 318 3.9E-120 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VSVS12_02297 6926a588b56de60414fc73e5b24dbd33 348 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 249 318 3.7E-17 T 11-10-2018 IPR001543 Surface presentation of antigen (SpoA) VSVS12_02297 6926a588b56de60414fc73e5b24dbd33 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 1.8E-18 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VSVS12_02297 6926a588b56de60414fc73e5b24dbd33 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 112 131 1.8E-18 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VSVS12_02297 6926a588b56de60414fc73e5b24dbd33 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 87 103 1.8E-18 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VSVS12_02297 6926a588b56de60414fc73e5b24dbd33 348 PRINTS PR00955 Flagellar motor switch protein FliM signature 210 228 1.8E-18 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VSVS12_02297 6926a588b56de60414fc73e5b24dbd33 348 Gene3D G3DSA:3.40.1550.10 42 229 1.6E-55 T 11-10-2018 IPR028976 CheC-like superfamily VSVS12_02297 6926a588b56de60414fc73e5b24dbd33 348 SUPERFAMILY SSF101801 246 322 5.62E-14 T 11-10-2018 IPR036429 SpoA-like superfamily VSVS12_02297 6926a588b56de60414fc73e5b24dbd33 348 Pfam PF02154 Flagellar motor switch protein FliM 36 228 1.5E-82 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VSVS12_02297 6926a588b56de60414fc73e5b24dbd33 348 PIRSF PIRSF002888 1 327 5.5E-91 T 11-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 VSVS12_04240 82b50c6be1efd27115d81d0ea870ec8c 480 SUPERFAMILY SSF46785 18 86 1.7E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_04240 82b50c6be1efd27115d81d0ea870ec8c 480 SUPERFAMILY SSF53383 116 474 2.16E-76 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VSVS12_04240 82b50c6be1efd27115d81d0ea870ec8c 480 Pfam PF00155 Aminotransferase class I and II 128 419 9.3E-21 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VSVS12_04240 82b50c6be1efd27115d81d0ea870ec8c 480 Gene3D G3DSA:3.40.640.10 98 471 9.0E-104 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VSVS12_04240 82b50c6be1efd27115d81d0ea870ec8c 480 SMART SM00345 26 85 5.8E-13 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VSVS12_04240 82b50c6be1efd27115d81d0ea870ec8c 480 Gene3D G3DSA:1.10.10.10 17 86 4.3E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_04240 82b50c6be1efd27115d81d0ea870ec8c 480 Pfam PF00392 Bacterial regulatory proteins, gntR family 23 85 9.4E-10 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VSVS12_00639 a2aeed6802030a7daeec536cdd6a50bb 268 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 266 4.5E-120 T 11-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 VSVS12_00639 a2aeed6802030a7daeec536cdd6a50bb 268 SUPERFAMILY SSF56300 3 252 5.01E-57 T 11-10-2018 VSVS12_00639 a2aeed6802030a7daeec536cdd6a50bb 268 Gene3D G3DSA:3.60.21.10 1 267 7.7E-76 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like VSVS12_00639 a2aeed6802030a7daeec536cdd6a50bb 268 PIRSF PIRSF000903 1 268 5.1E-119 T 11-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 VSVS12_00639 a2aeed6802030a7daeec536cdd6a50bb 268 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 268 46.726 T 11-10-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 VSVS12_00639 a2aeed6802030a7daeec536cdd6a50bb 268 Pfam PF00149 Calcineurin-like phosphoesterase 4 151 2.3E-15 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VSVS12_02569 e479780026d34a6f9567c76f6b5b9d42 316 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 315 5.4E-119 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 VSVS12_02569 e479780026d34a6f9567c76f6b5b9d42 316 SUPERFAMILY SSF81799 113 216 4.05E-31 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 VSVS12_02569 e479780026d34a6f9567c76f6b5b9d42 316 PIRSF PIRSF004486 1 316 1.1E-99 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 VSVS12_02569 e479780026d34a6f9567c76f6b5b9d42 316 SUPERFAMILY SSF53335 7 316 4.98E-43 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_02569 e479780026d34a6f9567c76f6b5b9d42 316 Gene3D G3DSA:3.40.50.150 10 315 2.1E-101 T 11-10-2018 VSVS12_02569 e479780026d34a6f9567c76f6b5b9d42 316 Gene3D G3DSA:1.10.150.170 112 218 2.1E-101 T 11-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 VSVS12_02569 e479780026d34a6f9567c76f6b5b9d42 316 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 316 37.753 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 VSVS12_02569 e479780026d34a6f9567c76f6b5b9d42 316 Pfam PF01795 MraW methylase family 5 315 5.1E-109 T 11-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 VSVS12_00664 ac267f68b50e210cda8a7a285720e26d 248 SUPERFAMILY SSF52833 104 247 1.16E-37 T 11-10-2018 IPR036249 Thioredoxin-like superfamily VSVS12_00664 ac267f68b50e210cda8a7a285720e26d 248 Gene3D G3DSA:3.10.450.70 30 84 7.2E-18 T 11-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 VSVS12_00664 ac267f68b50e210cda8a7a285720e26d 248 SUPERFAMILY SSF54423 32 86 6.93E-14 T 11-10-2018 IPR009094 Disulphide bond isomerase DsbC/G, N-terminal domain superfamily GO:0042597 VSVS12_00664 ac267f68b50e210cda8a7a285720e26d 248 Pfam PF10411 Disulfide bond isomerase protein N-terminus 38 86 2.2E-15 T 11-10-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal VSVS12_00664 ac267f68b50e210cda8a7a285720e26d 248 Gene3D G3DSA:3.40.30.10 85 248 3.9E-45 T 11-10-2018 VSVS12_00664 ac267f68b50e210cda8a7a285720e26d 248 Pfam PF13098 Thioredoxin-like domain 117 245 1.0E-27 T 11-10-2018 IPR012336 Thioredoxin-like fold VSVS12_00664 ac267f68b50e210cda8a7a285720e26d 248 ProSitePatterns PS00194 Thioredoxin family active site. 124 142 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VSVS12_04434 0fdde72d2e2bcd9677f1731db9d8a52d 86 TIGRFAM TIGR03758 conj_TIGR03758: integrating conjugative element protein, PFL_4701 family 12 81 2.9E-14 T 11-10-2018 IPR021676 Protein of unknown function DUF3262 VSVS12_04434 0fdde72d2e2bcd9677f1731db9d8a52d 86 Pfam PF11660 Protein of unknown function (DUF3262) 12 80 8.7E-13 T 11-10-2018 IPR021676 Protein of unknown function DUF3262 VSVS12_03991 7e94d2457bae20626a9b2fa6f6157e64 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 4.1E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_03991 7e94d2457bae20626a9b2fa6f6157e64 299 SUPERFAMILY SSF53850 89 291 1.72E-41 T 11-10-2018 VSVS12_03991 7e94d2457bae20626a9b2fa6f6157e64 299 Gene3D G3DSA:1.10.10.10 1 86 2.6E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_03991 7e94d2457bae20626a9b2fa6f6157e64 299 Pfam PF03466 LysR substrate binding domain 87 289 3.9E-41 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_03991 7e94d2457bae20626a9b2fa6f6157e64 299 Gene3D G3DSA:3.40.190.290 90 291 5.9E-61 T 11-10-2018 VSVS12_03991 7e94d2457bae20626a9b2fa6f6157e64 299 SUPERFAMILY SSF46785 1 87 1.63E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_00027 894311451bdffc4ed3f62cb532106e05 333 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 6.8E-59 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_00027 894311451bdffc4ed3f62cb532106e05 333 PIRSF PIRSF000149 1 331 1.1E-114 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_00027 894311451bdffc4ed3f62cb532106e05 333 Gene3D G3DSA:3.40.50.720 4 328 2.9E-125 T 11-10-2018 VSVS12_00027 894311451bdffc4ed3f62cb532106e05 333 Gene3D G3DSA:3.30.360.10 151 315 2.9E-125 T 11-10-2018 VSVS12_00027 894311451bdffc4ed3f62cb532106e05 333 SUPERFAMILY SSF55347 152 314 2.32E-62 T 11-10-2018 VSVS12_00027 894311451bdffc4ed3f62cb532106e05 333 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 11-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_00027 894311451bdffc4ed3f62cb532106e05 333 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 323 1.9E-117 T 11-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_00027 894311451bdffc4ed3f62cb532106e05 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 4.2E-28 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_00027 894311451bdffc4ed3f62cb532106e05 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 4.2E-28 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_00027 894311451bdffc4ed3f62cb532106e05 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 4.2E-28 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_00027 894311451bdffc4ed3f62cb532106e05 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 4.2E-28 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_00027 894311451bdffc4ed3f62cb532106e05 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 108 121 4.2E-28 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_00027 894311451bdffc4ed3f62cb532106e05 333 SUPERFAMILY SSF51735 1 175 2.84E-52 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_00027 894311451bdffc4ed3f62cb532106e05 333 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 101 3.7E-32 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_00027 894311451bdffc4ed3f62cb532106e05 333 SMART SM00846 3 152 2.3E-69 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02380 8c9d72c56d70c3a9d0ab4691c3f9ed13 148 Gene3D G3DSA:1.10.10.10 1 84 5.5E-35 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_02380 8c9d72c56d70c3a9d0ab4691c3f9ed13 148 SUPERFAMILY SSF46785 5 135 2.59E-43 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_02380 8c9d72c56d70c3a9d0ab4691c3f9ed13 148 Gene3D G3DSA:3.30.1490.190 85 141 4.1E-22 T 11-10-2018 VSVS12_02380 8c9d72c56d70c3a9d0ab4691c3f9ed13 148 Pfam PF01475 Ferric uptake regulator family 11 130 1.9E-45 T 11-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 VSVS12_02478 f09e6065ea46b5b9860354ac46652304 431 SUPERFAMILY SSF55785 85 196 2.62E-11 T 11-10-2018 IPR035965 PAS domain superfamily VSVS12_02478 f09e6065ea46b5b9860354ac46652304 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 388 406 2.1E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_02478 f09e6065ea46b5b9860354ac46652304 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 371 381 2.1E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_02478 f09e6065ea46b5b9860354ac46652304 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 353 367 2.1E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_02478 f09e6065ea46b5b9860354ac46652304 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 425 2.1E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_02478 f09e6065ea46b5b9860354ac46652304 431 Pfam PF00512 His Kinase A (phospho-acceptor) domain 204 270 5.3E-16 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_02478 f09e6065ea46b5b9860354ac46652304 431 SMART SM00091 97 165 2.7E-6 T 11-10-2018 IPR000014 PAS domain VSVS12_02478 f09e6065ea46b5b9860354ac46652304 431 SMART SM00388 204 271 2.2E-19 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_02478 f09e6065ea46b5b9860354ac46652304 431 SMART SM00387 316 428 5.0E-34 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_02478 f09e6065ea46b5b9860354ac46652304 431 SUPERFAMILY SSF47384 191 270 3.92E-18 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VSVS12_02478 f09e6065ea46b5b9860354ac46652304 431 Gene3D G3DSA:1.10.287.130 201 271 1.4E-20 T 11-10-2018 VSVS12_02478 f09e6065ea46b5b9860354ac46652304 431 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 98 203 5.2E-6 T 11-10-2018 IPR000014 PAS domain VSVS12_02478 f09e6065ea46b5b9860354ac46652304 431 SUPERFAMILY SSF55874 260 426 1.57E-40 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_02478 f09e6065ea46b5b9860354ac46652304 431 Gene3D G3DSA:3.30.565.10 280 428 1.8E-36 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_02478 f09e6065ea46b5b9860354ac46652304 431 Pfam PF11808 Domain of unknown function (DUF3329) 5 90 4.8E-31 T 11-10-2018 IPR021766 Phosphate regulon sensor protein PhoR GO:0000155|GO:0000160|GO:0004721 VSVS12_02478 f09e6065ea46b5b9860354ac46652304 431 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 93 423 4.8E-137 T 11-10-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 VSVS12_02478 f09e6065ea46b5b9860354ac46652304 431 Pfam PF00989 PAS fold 98 155 6.9E-8 T 11-10-2018 IPR013767 PAS fold GO:0006355 VSVS12_02478 f09e6065ea46b5b9860354ac46652304 431 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 316 426 3.4E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_02478 f09e6065ea46b5b9860354ac46652304 431 Gene3D G3DSA:3.30.450.20 84 200 5.9E-10 T 11-10-2018 VSVS12_03701 f9049842330f04f524715a2eb400edf5 190 Pfam PF11810 Domain of unknown function (DUF3332) 18 184 1.1E-43 T 11-10-2018 IPR021768 Protein of unknown function DUF3332 VSVS12_02597 22d80b2ca8c87f5abeb317517dcf0e4e 511 Pfam PF01336 OB-fold nucleic acid binding domain 73 145 3.3E-7 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VSVS12_02597 22d80b2ca8c87f5abeb317517dcf0e4e 511 PRINTS PR00982 Lysyl-tRNA synthetase signature 261 278 1.5E-38 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VSVS12_02597 22d80b2ca8c87f5abeb317517dcf0e4e 511 PRINTS PR00982 Lysyl-tRNA synthetase signature 198 208 1.5E-38 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VSVS12_02597 22d80b2ca8c87f5abeb317517dcf0e4e 511 PRINTS PR00982 Lysyl-tRNA synthetase signature 391 407 1.5E-38 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VSVS12_02597 22d80b2ca8c87f5abeb317517dcf0e4e 511 PRINTS PR00982 Lysyl-tRNA synthetase signature 214 230 1.5E-38 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VSVS12_02597 22d80b2ca8c87f5abeb317517dcf0e4e 511 PRINTS PR00982 Lysyl-tRNA synthetase signature 243 256 1.5E-38 T 11-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VSVS12_02597 22d80b2ca8c87f5abeb317517dcf0e4e 511 SUPERFAMILY SSF55681 161 507 2.95E-115 T 11-10-2018 VSVS12_02597 22d80b2ca8c87f5abeb317517dcf0e4e 511 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 19 509 3.6E-197 T 11-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VSVS12_02597 22d80b2ca8c87f5abeb317517dcf0e4e 511 SUPERFAMILY SSF50249 16 154 1.25E-32 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_02597 22d80b2ca8c87f5abeb317517dcf0e4e 511 Gene3D G3DSA:2.40.50.140 10 156 1.6E-27 T 11-10-2018 VSVS12_02597 22d80b2ca8c87f5abeb317517dcf0e4e 511 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 24 509 42.627 T 11-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VSVS12_02597 22d80b2ca8c87f5abeb317517dcf0e4e 511 Gene3D G3DSA:3.30.930.10 157 511 1.8E-128 T 11-10-2018 VSVS12_02597 22d80b2ca8c87f5abeb317517dcf0e4e 511 Pfam PF00152 tRNA synthetases class II (D, K and N) 161 506 2.9E-79 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VSVS12_01795 a50409f630a47bce367b1ef86c81ac2b 243 SMART SM00382 31 214 6.6E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_01795 a50409f630a47bce367b1ef86c81ac2b 243 SUPERFAMILY SSF52540 6 236 3.75E-79 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01795 a50409f630a47bce367b1ef86c81ac2b 243 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_01795 a50409f630a47bce367b1ef86c81ac2b 243 Gene3D G3DSA:3.40.50.300 4 243 1.3E-79 T 11-10-2018 VSVS12_01795 a50409f630a47bce367b1ef86c81ac2b 243 Pfam PF00005 ABC transporter 22 166 3.8E-37 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_01795 a50409f630a47bce367b1ef86c81ac2b 243 PIRSF PIRSF039085 3 242 5.7E-106 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VSVS12_00255 b3dd813555b06cdf087536bbfda0687a 380 Pfam PF02481 DNA recombination-mediator protein A 82 285 1.3E-79 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 VSVS12_00255 b3dd813555b06cdf087536bbfda0687a 380 Gene3D G3DSA:3.40.50.450 3 296 2.8E-99 T 11-10-2018 VSVS12_00255 b3dd813555b06cdf087536bbfda0687a 380 SUPERFAMILY SSF102405 88 294 4.71E-43 T 11-10-2018 VSVS12_00255 b3dd813555b06cdf087536bbfda0687a 380 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 79 293 7.1E-83 T 11-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 VSVS12_00255 b3dd813555b06cdf087536bbfda0687a 380 Gene3D G3DSA:1.10.10.10 297 373 2.5E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_00693 6f86686c3086f9189fdbc1f8bac99c00 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 11-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 VSVS12_00693 6f86686c3086f9189fdbc1f8bac99c00 112 SMART SM00938 4 105 8.8E-69 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VSVS12_00693 6f86686c3086f9189fdbc1f8bac99c00 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 8.3E-44 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VSVS12_00693 6f86686c3086f9189fdbc1f8bac99c00 112 Gene3D G3DSA:3.30.70.120 1 112 3.1E-46 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VSVS12_00693 6f86686c3086f9189fdbc1f8bac99c00 112 PRINTS PR00340 P-II protein signature 52 75 4.3E-41 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VSVS12_00693 6f86686c3086f9189fdbc1f8bac99c00 112 PRINTS PR00340 P-II protein signature 23 41 4.3E-41 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VSVS12_00693 6f86686c3086f9189fdbc1f8bac99c00 112 PRINTS PR00340 P-II protein signature 83 103 4.3E-41 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VSVS12_00693 6f86686c3086f9189fdbc1f8bac99c00 112 PRINTS PR00340 P-II protein signature 2 17 4.3E-41 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VSVS12_00693 6f86686c3086f9189fdbc1f8bac99c00 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 11-10-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 VSVS12_00693 6f86686c3086f9189fdbc1f8bac99c00 112 SUPERFAMILY SSF54913 1 112 3.18E-45 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta VSVS12_00693 6f86686c3086f9189fdbc1f8bac99c00 112 PIRSF PIRSF039144 1 112 2.2E-56 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VSVS12_04367 055311f07e2b837a4f36c4dc48e1f220 527 SUPERFAMILY SSF48452 171 318 2.28E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_04367 055311f07e2b837a4f36c4dc48e1f220 527 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 367 526 5.2E-34 T 11-10-2018 IPR000160 GGDEF domain VSVS12_04367 055311f07e2b837a4f36c4dc48e1f220 527 Gene3D G3DSA:3.30.70.270 368 527 3.4E-41 T 11-10-2018 VSVS12_04367 055311f07e2b837a4f36c4dc48e1f220 527 Pfam PF00990 Diguanylate cyclase, GGDEF domain 371 523 5.5E-32 T 11-10-2018 IPR000160 GGDEF domain VSVS12_04367 055311f07e2b837a4f36c4dc48e1f220 527 Gene3D G3DSA:1.25.40.10 21 367 2.7E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_04367 055311f07e2b837a4f36c4dc48e1f220 527 SUPERFAMILY SSF48452 34 188 5.01E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_04367 055311f07e2b837a4f36c4dc48e1f220 527 SMART SM00267 359 527 2.7E-34 T 11-10-2018 IPR000160 GGDEF domain VSVS12_04367 055311f07e2b837a4f36c4dc48e1f220 527 SUPERFAMILY SSF55073 375 526 5.65E-36 T 11-10-2018 IPR029787 Nucleotide cyclase VSVS12_03254 9b5fd213d4c9fe938360168c6a7aa0db 74 Pfam PF13693 Winged helix-turn-helix DNA-binding 7 71 4.9E-28 T 11-10-2018 IPR038722 Ner, winged helix-turn-helix DNA-binding domain VSVS12_03254 9b5fd213d4c9fe938360168c6a7aa0db 74 SUPERFAMILY SSF47413 5 71 5.23E-25 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VSVS12_03254 9b5fd213d4c9fe938360168c6a7aa0db 74 Gene3D G3DSA:1.10.260.40 2 73 3.9E-31 T 11-10-2018 VSVS12_00867 d60ec0f01394d731731b5ad8bb1b6f31 243 Pfam PF00696 Amino acid kinase family 11 219 2.1E-26 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VSVS12_00867 d60ec0f01394d731731b5ad8bb1b6f31 243 Gene3D G3DSA:3.40.1160.10 3 243 7.4E-76 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VSVS12_00867 d60ec0f01394d731731b5ad8bb1b6f31 243 SUPERFAMILY SSF53633 7 240 2.36E-71 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VSVS12_00867 d60ec0f01394d731731b5ad8bb1b6f31 243 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 4.1E-102 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 VSVS12_00867 d60ec0f01394d731731b5ad8bb1b6f31 243 PIRSF PIRSF005650 4 243 2.0E-89 T 11-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 VSVS12_00867 d60ec0f01394d731731b5ad8bb1b6f31 243 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 44.042 T 11-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 VSVS12_04558 7319c2372aa0cb8e7f2f74cbe345121e 359 Gene3D G3DSA:1.10.10.10 155 268 1.2E-9 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_04558 7319c2372aa0cb8e7f2f74cbe345121e 359 Gene3D G3DSA:1.10.10.10 10 122 2.8E-5 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_04558 7319c2372aa0cb8e7f2f74cbe345121e 359 SUPERFAMILY SSF46785 140 261 7.53E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_04558 7319c2372aa0cb8e7f2f74cbe345121e 359 SUPERFAMILY SSF46785 22 142 5.99E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_04558 7319c2372aa0cb8e7f2f74cbe345121e 359 Pfam PF01051 Initiator Replication protein 18 259 1.0E-35 T 11-10-2018 IPR000525 Initiator Rep protein GO:0003887|GO:0005727|GO:0006270 VSVS12_00778 1b33117b113c2708f0e94ff44d4f9291 100 SUPERFAMILY SSF48295 3 95 4.76E-29 T 11-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 VSVS12_00778 1b33117b113c2708f0e94ff44d4f9291 100 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 4 78 4.0E-31 T 11-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 VSVS12_00778 1b33117b113c2708f0e94ff44d4f9291 100 TIGRFAM TIGR01321 TrpR: trp operon repressor 6 89 2.6E-26 T 11-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 VSVS12_00778 1b33117b113c2708f0e94ff44d4f9291 100 PIRSF PIRSF003196 1 99 1.1E-37 T 11-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 VSVS12_00778 1b33117b113c2708f0e94ff44d4f9291 100 Pfam PF01371 Trp repressor protein 8 92 7.1E-31 T 11-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 VSVS12_00778 1b33117b113c2708f0e94ff44d4f9291 100 Gene3D G3DSA:1.10.1270.10 1 98 1.2E-33 T 11-10-2018 IPR038116 TrpR-like superfamily VSVS12_00778 1b33117b113c2708f0e94ff44d4f9291 100 Hamap MF_00475 Trp operon repressor [trpR]. 6 99 23.32 T 11-10-2018 IPR013335 Trp repressor, bacterial GO:0006355 VSVS12_00880 0229fb1cdfe5e8a95f50586b3a5aa2c4 1159 Pfam PF14579 Helix-hairpin-helix motif 809 897 1.1E-25 T 11-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VSVS12_00880 0229fb1cdfe5e8a95f50586b3a5aa2c4 1159 Gene3D G3DSA:1.10.10.1600 433 510 8.4E-31 T 11-10-2018 VSVS12_00880 0229fb1cdfe5e8a95f50586b3a5aa2c4 1159 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 292 735 3.4E-172 T 11-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VSVS12_00880 0229fb1cdfe5e8a95f50586b3a5aa2c4 1159 Gene3D G3DSA:3.20.20.140 1 270 5.5E-90 T 11-10-2018 VSVS12_00880 0229fb1cdfe5e8a95f50586b3a5aa2c4 1159 SMART SM00481 7 74 1.2E-25 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal VSVS12_00880 0229fb1cdfe5e8a95f50586b3a5aa2c4 1159 Gene3D G3DSA:2.40.50.140 985 1072 8.2E-9 T 11-10-2018 VSVS12_00880 0229fb1cdfe5e8a95f50586b3a5aa2c4 1159 SUPERFAMILY SSF89550 5 263 2.16E-10 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 VSVS12_00880 0229fb1cdfe5e8a95f50586b3a5aa2c4 1159 Pfam PF01336 OB-fold nucleic acid binding domain 993 1071 1.0E-10 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VSVS12_00880 0229fb1cdfe5e8a95f50586b3a5aa2c4 1159 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1030 0.0 T 11-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VSVS12_00880 0229fb1cdfe5e8a95f50586b3a5aa2c4 1159 SUPERFAMILY SSF50249 976 1066 1.58E-5 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_00880 0229fb1cdfe5e8a95f50586b3a5aa2c4 1159 Pfam PF02811 PHP domain 8 172 2.9E-41 T 11-10-2018 IPR004013 PHP domain GO:0003824 VSVS12_03427 c92f5989ce5d04a33557b456a55c7a97 272 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 13 237 3.6E-21 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 VSVS12_03427 c92f5989ce5d04a33557b456a55c7a97 272 Gene3D G3DSA:3.30.1240.10 89 194 9.3E-75 T 11-10-2018 VSVS12_03427 c92f5989ce5d04a33557b456a55c7a97 272 Gene3D G3DSA:3.40.50.1000 13 264 9.3E-75 T 11-10-2018 IPR023214 HAD superfamily VSVS12_03427 c92f5989ce5d04a33557b456a55c7a97 272 Pfam PF08282 haloacid dehalogenase-like hydrolase 13 264 8.3E-56 T 11-10-2018 VSVS12_03427 c92f5989ce5d04a33557b456a55c7a97 272 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 13 264 1.1E-50 T 11-10-2018 IPR000150 Cof family GO:0016787 VSVS12_03427 c92f5989ce5d04a33557b456a55c7a97 272 SUPERFAMILY SSF56784 8 269 7.07E-65 T 11-10-2018 IPR036412 HAD-like superfamily VSVS12_02060 518d1981fca5a849e60b4b607e6ede32 204 Pfam PF00117 Glutamine amidotransferase class-I 8 202 3.7E-17 T 11-10-2018 IPR017926 Glutamine amidotransferase VSVS12_02060 518d1981fca5a849e60b4b607e6ede32 204 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 6 203 5.6E-71 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 VSVS12_02060 518d1981fca5a849e60b4b607e6ede32 204 Gene3D G3DSA:3.40.50.880 2 204 1.0E-73 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like VSVS12_02060 518d1981fca5a849e60b4b607e6ede32 204 PIRSF PIRSF000495 4 204 1.6E-66 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 VSVS12_02060 518d1981fca5a849e60b4b607e6ede32 204 SUPERFAMILY SSF52317 5 203 1.16E-53 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like VSVS12_02060 518d1981fca5a849e60b4b607e6ede32 204 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 5 204 33.695 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 VSVS12_04270 e9bb2c2ad6184b4c11258992f1c3e35a 397 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 84 130 3.1E-11 T 11-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain VSVS12_04270 e9bb2c2ad6184b4c11258992f1c3e35a 397 Pfam PF01610 Transposase 149 388 9.8E-64 T 11-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain VSVS12_01015 e9bb2c2ad6184b4c11258992f1c3e35a 397 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 84 130 3.1E-11 T 11-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain VSVS12_01015 e9bb2c2ad6184b4c11258992f1c3e35a 397 Pfam PF01610 Transposase 149 388 9.8E-64 T 11-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain VSVS12_01428 e9bb2c2ad6184b4c11258992f1c3e35a 397 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 84 130 3.1E-11 T 11-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain VSVS12_01428 e9bb2c2ad6184b4c11258992f1c3e35a 397 Pfam PF01610 Transposase 149 388 9.8E-64 T 11-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain VSVS12_01758 e9bb2c2ad6184b4c11258992f1c3e35a 397 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 84 130 3.1E-11 T 11-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain VSVS12_01758 e9bb2c2ad6184b4c11258992f1c3e35a 397 Pfam PF01610 Transposase 149 388 9.8E-64 T 11-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain VSVS12_04095 2609f57ee4701dd473b42c35882a027b 90 Gene3D G3DSA:1.20.890.30 50 90 1.2E-23 T 11-10-2018 VSVS12_04095 2609f57ee4701dd473b42c35882a027b 90 Pfam PF08681 Protein of unknown function (DUF1778) 7 86 1.1E-21 T 11-10-2018 IPR014795 Vibrio phage ICP1, Orf50 VSVS12_04095 2609f57ee4701dd473b42c35882a027b 90 SUPERFAMILY SSF47598 6 81 1.36E-17 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 VSVS12_04095 2609f57ee4701dd473b42c35882a027b 90 Gene3D G3DSA:1.10.1220.10 1 49 1.8E-29 T 11-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 VSVS12_03595 56531778d9cd967372d33815f96ade14 463 Gene3D G3DSA:3.30.1330.90 10 163 4.7E-49 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 VSVS12_03595 56531778d9cd967372d33815f96ade14 463 SUPERFAMILY SSF143548 16 161 1.1E-40 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 VSVS12_03595 56531778d9cd967372d33815f96ade14 463 Pfam PF03315 Serine dehydratase beta chain 3 160 5.2E-53 T 11-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 VSVS12_03595 56531778d9cd967372d33815f96ade14 463 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 3 455 2.7E-197 T 11-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 VSVS12_03595 56531778d9cd967372d33815f96ade14 463 Pfam PF03313 Serine dehydratase alpha chain 191 454 6.4E-94 T 11-10-2018 IPR005130 Serine dehydratase-like, alpha subunit VSVS12_02210 93acfd8bb026814e5d7f31a6dbcf276a 331 Gene3D G3DSA:3.40.50.720 4 326 1.7E-154 T 11-10-2018 VSVS12_02210 93acfd8bb026814e5d7f31a6dbcf276a 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 6.2E-40 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02210 93acfd8bb026814e5d7f31a6dbcf276a 331 Gene3D G3DSA:3.30.360.10 149 314 1.7E-154 T 11-10-2018 VSVS12_02210 93acfd8bb026814e5d7f31a6dbcf276a 331 PIRSF PIRSF000149 1 331 1.9E-133 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02210 93acfd8bb026814e5d7f31a6dbcf276a 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 6.2E-70 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02210 93acfd8bb026814e5d7f31a6dbcf276a 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 1.6E-46 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02210 93acfd8bb026814e5d7f31a6dbcf276a 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 1.6E-46 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02210 93acfd8bb026814e5d7f31a6dbcf276a 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 1.6E-46 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02210 93acfd8bb026814e5d7f31a6dbcf276a 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 1.6E-46 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02210 93acfd8bb026814e5d7f31a6dbcf276a 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 1.6E-46 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02210 93acfd8bb026814e5d7f31a6dbcf276a 331 SUPERFAMILY SSF55347 149 312 4.05E-79 T 11-10-2018 VSVS12_02210 93acfd8bb026814e5d7f31a6dbcf276a 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 2.2E-137 T 11-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02210 93acfd8bb026814e5d7f31a6dbcf276a 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 11-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02210 93acfd8bb026814e5d7f31a6dbcf276a 331 SMART SM00846 3 150 1.1E-93 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02210 93acfd8bb026814e5d7f31a6dbcf276a 331 SUPERFAMILY SSF51735 3 166 1.09E-65 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_01286 b9d2cb5906751a1c9f73265481016b44 263 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 14 258 33.711 T 11-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 VSVS12_01286 b9d2cb5906751a1c9f73265481016b44 263 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 16 258 8.3E-82 T 11-10-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 VSVS12_01286 b9d2cb5906751a1c9f73265481016b44 263 Pfam PF12697 Alpha/beta hydrolase family 19 251 6.4E-15 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VSVS12_01286 b9d2cb5906751a1c9f73265481016b44 263 Gene3D G3DSA:3.40.50.1820 6 259 4.9E-62 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold VSVS12_01286 b9d2cb5906751a1c9f73265481016b44 263 SUPERFAMILY SSF53474 12 258 1.29E-37 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold VSVS12_02351 f7fed9ec0743337a5b82e1b271e706ea 294 Gene3D G3DSA:1.10.600.10 1 294 4.3E-109 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily VSVS12_02351 f7fed9ec0743337a5b82e1b271e706ea 294 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 213 225 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site VSVS12_02351 f7fed9ec0743337a5b82e1b271e706ea 294 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 79 95 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site VSVS12_02351 f7fed9ec0743337a5b82e1b271e706ea 294 Pfam PF00348 Polyprenyl synthetase 28 270 2.0E-57 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 VSVS12_02351 f7fed9ec0743337a5b82e1b271e706ea 294 SUPERFAMILY SSF48576 5 286 1.31E-85 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily VSVS12_01463 250b4db6a321cb3923cfcb2bc346cc70 214 Pfam PF10947 Protein of unknown function (DUF2628) 22 124 1.5E-6 T 11-10-2018 IPR024399 Protein of unknown function DUF2628 VSVS12_04137 5bad384f813f4dd57551c7bab0c52d0d 146 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 6 127 1.7E-30 T 11-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 VSVS12_04137 5bad384f813f4dd57551c7bab0c52d0d 146 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 144 3.9E-31 T 11-10-2018 IPR002178 PTS EIIA type-2 domain VSVS12_04137 5bad384f813f4dd57551c7bab0c52d0d 146 SUPERFAMILY SSF55804 1 145 2.75E-29 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VSVS12_04137 5bad384f813f4dd57551c7bab0c52d0d 146 Gene3D G3DSA:3.40.930.10 1 145 8.7E-32 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VSVS12_03637 0e99ea899c29cd9a902ea433d982dec9 255 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 11-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VSVS12_03637 0e99ea899c29cd9a902ea433d982dec9 255 Gene3D G3DSA:1.10.10.10 1 64 6.9E-8 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_03637 0e99ea899c29cd9a902ea433d982dec9 255 SMART SM00420 6 58 1.9E-26 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VSVS12_03637 0e99ea899c29cd9a902ea433d982dec9 255 SUPERFAMILY SSF100950 73 234 1.45E-29 T 11-10-2018 IPR037171 NagB/RpiA transferase-like VSVS12_03637 0e99ea899c29cd9a902ea433d982dec9 255 Pfam PF00455 DeoR C terminal sensor domain 75 233 3.1E-50 T 11-10-2018 IPR014036 DeoR C-terminal sensor domain VSVS12_03637 0e99ea899c29cd9a902ea433d982dec9 255 SUPERFAMILY SSF46785 5 77 7.58E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_03637 0e99ea899c29cd9a902ea433d982dec9 255 SMART SM01134 72 234 4.6E-65 T 11-10-2018 VSVS12_03637 0e99ea899c29cd9a902ea433d982dec9 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 3.1E-12 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VSVS12_03637 0e99ea899c29cd9a902ea433d982dec9 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 3.1E-12 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VSVS12_03637 0e99ea899c29cd9a902ea433d982dec9 255 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 1.2E-23 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VSVS12_03637 0e99ea899c29cd9a902ea433d982dec9 255 Gene3D G3DSA:3.30.750.70 69 139 8.4E-9 T 11-10-2018 VSVS12_02570 ce24ca5a8e1e1e185f17d5cda4655cf9 287 PIRSF PIRSF005917 1 286 2.9E-107 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 VSVS12_02570 ce24ca5a8e1e1e185f17d5cda4655cf9 287 SUPERFAMILY SSF53790 12 232 5.1E-85 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 VSVS12_02570 ce24ca5a8e1e1e185f17d5cda4655cf9 287 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 14 213 2.9E-27 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 VSVS12_02570 ce24ca5a8e1e1e185f17d5cda4655cf9 287 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.543 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 VSVS12_02570 ce24ca5a8e1e1e185f17d5cda4655cf9 287 Gene3D G3DSA:3.30.950.10 121 241 1.1E-44 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 VSVS12_02570 ce24ca5a8e1e1e185f17d5cda4655cf9 287 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 284 4.9E-102 T 11-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 VSVS12_02570 ce24ca5a8e1e1e185f17d5cda4655cf9 287 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 11-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 VSVS12_02570 ce24ca5a8e1e1e185f17d5cda4655cf9 287 Gene3D G3DSA:3.40.1010.10 2 120 1.4E-46 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 VSVS12_02566 6f7c638a5c37df790cb21c686877b4a8 498 Gene3D G3DSA:3.40.1190.10 109 344 1.6E-77 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VSVS12_02566 6f7c638a5c37df790cb21c686877b4a8 498 SUPERFAMILY SSF63418 6 107 3.01E-22 T 11-10-2018 IPR035911 MurE/MurF, N-terminal VSVS12_02566 6f7c638a5c37df790cb21c686877b4a8 498 Pfam PF01225 Mur ligase family, catalytic domain 28 104 4.0E-11 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 VSVS12_02566 6f7c638a5c37df790cb21c686877b4a8 498 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 5 494 33.351 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 VSVS12_02566 6f7c638a5c37df790cb21c686877b4a8 498 SUPERFAMILY SSF53623 109 341 8.37E-72 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VSVS12_02566 6f7c638a5c37df790cb21c686877b4a8 498 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 24 494 1.3E-166 T 11-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 VSVS12_02566 6f7c638a5c37df790cb21c686877b4a8 498 SUPERFAMILY SSF53244 343 494 1.31E-46 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VSVS12_02566 6f7c638a5c37df790cb21c686877b4a8 498 Gene3D G3DSA:3.40.1390.10 4 108 1.4E-27 T 11-10-2018 VSVS12_02566 6f7c638a5c37df790cb21c686877b4a8 498 Pfam PF02875 Mur ligase family, glutamate ligase domain 344 427 1.4E-22 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VSVS12_02566 6f7c638a5c37df790cb21c686877b4a8 498 Pfam PF08245 Mur ligase middle domain 116 320 9.0E-49 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VSVS12_02566 6f7c638a5c37df790cb21c686877b4a8 498 Gene3D G3DSA:3.90.190.20 345 496 1.0E-53 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VSVS12_02796 21787db7f633709418abd9c014a233d8 274 Gene3D G3DSA:3.30.420.10 105 265 6.8E-17 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VSVS12_02796 21787db7f633709418abd9c014a233d8 274 Pfam PF00665 Integrase core domain 108 220 2.5E-32 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VSVS12_02796 21787db7f633709418abd9c014a233d8 274 Pfam PF13276 HTH-like domain 26 83 1.6E-11 T 11-10-2018 IPR025948 HTH-like domain VSVS12_02796 21787db7f633709418abd9c014a233d8 274 SUPERFAMILY SSF53098 101 264 1.52E-41 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_02327 f607962795f1e817156ab8488b70fd4b 119 Pfam PF13698 Domain of unknown function (DUF4156) 30 113 2.6E-20 T 11-10-2018 IPR025294 Protein of unknown function DUF4156 VSVS12_00337 a6212c5bff0341be5f253113e328b8f8 352 Gene3D G3DSA:3.40.50.2000 7 156 1.2E-24 T 11-10-2018 VSVS12_00337 a6212c5bff0341be5f253113e328b8f8 352 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 74 314 7.5E-58 T 11-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 VSVS12_00337 a6212c5bff0341be5f253113e328b8f8 352 Gene3D G3DSA:3.40.50.2000 163 348 7.9E-41 T 11-10-2018 VSVS12_00337 a6212c5bff0341be5f253113e328b8f8 352 SUPERFAMILY SSF53756 11 342 5.65E-82 T 11-10-2018 VSVS12_03957 d8ab3f1262188398a4c883e66921bfbf 485 SUPERFAMILY SSF141322 414 481 7.72E-9 T 11-10-2018 VSVS12_03957 d8ab3f1262188398a4c883e66921bfbf 485 Gene3D G3DSA:2.40.50.140 422 480 6.5E-14 T 11-10-2018 VSVS12_03957 d8ab3f1262188398a4c883e66921bfbf 485 SUPERFAMILY SSF52096 19 243 5.3E-26 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VSVS12_03957 d8ab3f1262188398a4c883e66921bfbf 485 Pfam PF01957 NfeD-like C-terminal, partner-binding 342 480 6.1E-32 T 11-10-2018 IPR002810 NfeD-like, C-terminal domain VSVS12_01539 5dcc41afa3f0cf5f5a0947f8cfdb0a15 360 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 359 52.157 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 VSVS12_01539 5dcc41afa3f0cf5f5a0947f8cfdb0a15 360 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 358 8.6E-162 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 VSVS12_01539 5dcc41afa3f0cf5f5a0947f8cfdb0a15 360 Gene3D G3DSA:3.40.640.10 17 257 5.9E-90 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VSVS12_01539 5dcc41afa3f0cf5f5a0947f8cfdb0a15 360 Pfam PF00266 Aminotransferase class-V 4 348 1.5E-60 T 11-10-2018 IPR000192 Aminotransferase class V domain VSVS12_01539 5dcc41afa3f0cf5f5a0947f8cfdb0a15 360 PIRSF PIRSF000525 1 360 1.1E-154 T 11-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 VSVS12_01539 5dcc41afa3f0cf5f5a0947f8cfdb0a15 360 SUPERFAMILY SSF53383 2 356 9.43E-119 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VSVS12_01539 5dcc41afa3f0cf5f5a0947f8cfdb0a15 360 Gene3D G3DSA:3.90.1150.10 258 360 7.1E-43 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VSVS12_04247 92cebd34e995764585d7ce8ab11a6d34 309 SMART SM00283 3 199 2.0E-14 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_04247 92cebd34e995764585d7ce8ab11a6d34 309 Gene3D G3DSA:1.10.287.950 7 204 5.0E-44 T 11-10-2018 VSVS12_04247 92cebd34e995764585d7ce8ab11a6d34 309 Pfam PF13682 Chemoreceptor zinc-binding domain 202 266 3.0E-13 T 11-10-2018 IPR025991 Chemoreceptor zinc-binding domain VSVS12_04247 92cebd34e995764585d7ce8ab11a6d34 309 SUPERFAMILY SSF58104 14 193 3.79E-45 T 11-10-2018 VSVS12_04247 92cebd34e995764585d7ce8ab11a6d34 309 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 70 192 1.0E-31 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_01332 928a174eaa1ba248d6f4cbe16d488b1b 281 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 275 2.0E-76 T 11-10-2018 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 VSVS12_02934 398bbe4977b4d5261c14706e871aa3bd 162 Gene3D G3DSA:1.20.120.1370 1 155 4.6E-51 T 11-10-2018 IPR038309 Rsd/AlgQ superfamily VSVS12_02934 398bbe4977b4d5261c14706e871aa3bd 162 PIRSF PIRSF016548 1 162 1.3E-66 T 11-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 VSVS12_02934 398bbe4977b4d5261c14706e871aa3bd 162 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 1 152 7.9E-54 T 11-10-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 VSVS12_00919 ada2cbe8ff4eaec38797d46dc55857d8 220 Gene3D G3DSA:3.30.160.150 21 170 2.5E-49 T 11-10-2018 VSVS12_00919 ada2cbe8ff4eaec38797d46dc55857d8 220 Pfam PF04390 Lipopolysaccharide-assembly 47 161 1.7E-10 T 11-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 VSVS12_00919 ada2cbe8ff4eaec38797d46dc55857d8 220 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 9 166 24.682 T 11-10-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 VSVS12_03256 9422986196f80b49ba7e632941c41443 604 Pfam PF00999 Sodium/hydrogen exchanger family 15 386 1.4E-32 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VSVS12_03256 9422986196f80b49ba7e632941c41443 604 Gene3D G3DSA:3.40.50.720 395 511 8.4E-10 T 11-10-2018 VSVS12_03256 9422986196f80b49ba7e632941c41443 604 Gene3D G3DSA:1.20.1530.20 5 388 1.5E-13 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily VSVS12_03256 9422986196f80b49ba7e632941c41443 604 Pfam PF02254 TrkA-N domain 399 487 1.3E-7 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VSVS12_03256 9422986196f80b49ba7e632941c41443 604 SUPERFAMILY SSF51735 399 492 4.33E-8 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_00421 31dc3ba25b73d4b6f36104b91d1bc260 344 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 200 221 - T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VSVS12_00421 31dc3ba25b73d4b6f36104b91d1bc260 344 SUPERFAMILY SSF51735 16 190 1.8E-48 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_00421 31dc3ba25b73d4b6f36104b91d1bc260 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 18 35 2.0E-42 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VSVS12_00421 31dc3ba25b73d4b6f36104b91d1bc260 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 68 95 2.0E-42 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VSVS12_00421 31dc3ba25b73d4b6f36104b91d1bc260 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 210 234 2.0E-42 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VSVS12_00421 31dc3ba25b73d4b6f36104b91d1bc260 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 185 209 2.0E-42 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VSVS12_00421 31dc3ba25b73d4b6f36104b91d1bc260 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 144 164 2.0E-42 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VSVS12_00421 31dc3ba25b73d4b6f36104b91d1bc260 344 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 250 267 2.0E-42 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VSVS12_00421 31dc3ba25b73d4b6f36104b91d1bc260 344 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 16 171 3.2E-45 T 11-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VSVS12_00421 31dc3ba25b73d4b6f36104b91d1bc260 344 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 14 334 36.683 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VSVS12_00421 31dc3ba25b73d4b6f36104b91d1bc260 344 Gene3D G3DSA:3.40.50.720 3 199 1.6E-50 T 11-10-2018 VSVS12_00421 31dc3ba25b73d4b6f36104b91d1bc260 344 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 192 331 3.5E-52 T 11-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VSVS12_00421 31dc3ba25b73d4b6f36104b91d1bc260 344 Gene3D G3DSA:1.10.1040.10 201 344 4.8E-54 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VSVS12_00421 31dc3ba25b73d4b6f36104b91d1bc260 344 SUPERFAMILY SSF48179 191 343 6.97E-56 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VSVS12_00421 31dc3ba25b73d4b6f36104b91d1bc260 344 PIRSF PIRSF000114 9 344 5.9E-95 T 11-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 VSVS12_03864 7a53d983986e2d2e1aaf2b24f6ddbd3e 492 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 488 193.837 T 11-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 VSVS12_03864 7a53d983986e2d2e1aaf2b24f6ddbd3e 492 Pfam PF13500 AAA domain 6 232 8.6E-23 T 11-10-2018 VSVS12_03864 7a53d983986e2d2e1aaf2b24f6ddbd3e 492 SUPERFAMILY SSF52540 7 239 2.56E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03864 7a53d983986e2d2e1aaf2b24f6ddbd3e 492 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 8 480 7.5E-155 T 11-10-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 VSVS12_03864 7a53d983986e2d2e1aaf2b24f6ddbd3e 492 SUPERFAMILY SSF52317 257 447 1.2E-35 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like VSVS12_03864 7a53d983986e2d2e1aaf2b24f6ddbd3e 492 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 255 437 2.8E-54 T 11-10-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 VSVS12_03864 7a53d983986e2d2e1aaf2b24f6ddbd3e 492 Gene3D G3DSA:3.40.50.880 259 445 3.8E-16 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like VSVS12_03864 7a53d983986e2d2e1aaf2b24f6ddbd3e 492 Gene3D G3DSA:3.40.50.300 3 246 6.9E-58 T 11-10-2018 VSVS12_02653 7461b62f71d1b901224544c7b4278c4b 326 Pfam PF03888 MucB/RseB N-terminal domain 26 195 1.2E-61 T 11-10-2018 IPR033434 MucB/RseB, N-terminal VSVS12_02653 7461b62f71d1b901224544c7b4278c4b 326 Pfam PF17188 MucB/RseB C-terminal domain 217 311 2.3E-27 T 11-10-2018 IPR033436 MucB/RseB, C-terminal VSVS12_02653 7461b62f71d1b901224544c7b4278c4b 326 Gene3D G3DSA:3.30.200.100 217 316 1.5E-28 T 11-10-2018 IPR038484 MucB/RseB, C-terminal domain superfamily VSVS12_02653 7461b62f71d1b901224544c7b4278c4b 326 PIRSF PIRSF005427 1 318 2.8E-87 T 11-10-2018 IPR005588 MucB/RseB VSVS12_02653 7461b62f71d1b901224544c7b4278c4b 326 Gene3D G3DSA:2.50.20.10 24 208 4.3E-55 T 11-10-2018 VSVS12_04118 6b1f59fed644ed95dcf979222d7c5d5d 359 Gene3D G3DSA:1.10.3720.10 144 355 2.4E-17 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_04118 6b1f59fed644ed95dcf979222d7c5d5d 359 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 6 51 1.0E-11 T 11-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VSVS12_04118 6b1f59fed644ed95dcf979222d7c5d5d 359 SUPERFAMILY SSF161098 150 341 1.57E-19 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_04118 6b1f59fed644ed95dcf979222d7c5d5d 359 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 169 356 2.9E-21 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VSVS12_04429 6f13c2f9cb377742b5a12a233fbbbd6d 723 TIGRFAM TIGR03743 SXT_TraD: conjugative coupling factor TraD, SXT/TOL subfamily 8 658 5.5E-207 T 11-10-2018 IPR022458 Conjugative coupling factor TraG/TraD VSVS12_04429 6f13c2f9cb377742b5a12a233fbbbd6d 723 Pfam PF12696 TraM recognition site of TraD and TraG 513 637 6.4E-8 T 11-10-2018 IPR032689 TraD/TraG, TraM recognition site VSVS12_04429 6f13c2f9cb377742b5a12a233fbbbd6d 723 TIGRFAM TIGR03754 conj_TOL_TraD: conjugative coupling factor TraD, PFGI-1 class 8 658 6.3E-240 T 11-10-2018 IPR022503 Conjugative coupling factor TraG/TraD, PFGI-1 VSVS12_04429 6f13c2f9cb377742b5a12a233fbbbd6d 723 SUPERFAMILY SSF52540 169 651 1.8E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_04429 6f13c2f9cb377742b5a12a233fbbbd6d 723 Pfam PF01935 Domain of unknown function DUF87 204 241 6.0E-5 T 11-10-2018 IPR002789 Helicase HerA, central domain VSVS12_04429 6f13c2f9cb377742b5a12a233fbbbd6d 723 Gene3D G3DSA:3.40.50.300 430 660 5.2E-22 T 11-10-2018 VSVS12_04429 6f13c2f9cb377742b5a12a233fbbbd6d 723 Gene3D G3DSA:3.40.50.300 177 341 1.5E-11 T 11-10-2018 VSVS12_01404 09b8fec22c89aa6bb9baec111674a37e 637 SUPERFAMILY SSF56300 145 545 1.14E-10 T 11-10-2018 VSVS12_01404 09b8fec22c89aa6bb9baec111674a37e 637 Gene3D G3DSA:3.60.21.70 383 549 1.9E-5 T 11-10-2018 IPR038607 PhoD-like superfamily VSVS12_02893 37de02a55d732a0f498877d0c448dabc 124 SUPERFAMILY SSF50249 3 123 4.03E-52 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_02893 37de02a55d732a0f498877d0c448dabc 124 Pfam PF00164 Ribosomal protein S12/S23 12 123 7.8E-43 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_02893 37de02a55d732a0f498877d0c448dabc 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 123 1.0E-70 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02893 37de02a55d732a0f498877d0c448dabc 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_02893 37de02a55d732a0f498877d0c448dabc 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.712 T 11-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02893 37de02a55d732a0f498877d0c448dabc 124 PIRSF PIRSF002133 1 124 3.4E-54 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_02893 37de02a55d732a0f498877d0c448dabc 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 7.1E-60 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_02893 37de02a55d732a0f498877d0c448dabc 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 7.1E-60 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_02893 37de02a55d732a0f498877d0c448dabc 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 7.1E-60 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_02893 37de02a55d732a0f498877d0c448dabc 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 7.1E-60 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_02893 37de02a55d732a0f498877d0c448dabc 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 7.1E-60 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_02893 37de02a55d732a0f498877d0c448dabc 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 7.1E-60 T 11-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_02893 37de02a55d732a0f498877d0c448dabc 124 Gene3D G3DSA:2.40.50.140 1 124 1.3E-63 T 11-10-2018 VSVS12_02306 274e0e4975dd4fab6ceea1f67170c8f1 468 Gene3D G3DSA:1.10.10.60 402 465 8.5E-9 T 11-10-2018 VSVS12_02306 274e0e4975dd4fab6ceea1f67170c8f1 468 SMART SM00448 4 115 1.4E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_02306 274e0e4975dd4fab6ceea1f67170c8f1 468 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 215 230 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VSVS12_02306 274e0e4975dd4fab6ceea1f67170c8f1 468 Pfam PF00072 Response regulator receiver domain 6 115 1.6E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_02306 274e0e4975dd4fab6ceea1f67170c8f1 468 SUPERFAMILY SSF52172 3 173 5.69E-40 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_02306 274e0e4975dd4fab6ceea1f67170c8f1 468 Gene3D G3DSA:3.40.50.300 120 300 1.2E-64 T 11-10-2018 VSVS12_02306 274e0e4975dd4fab6ceea1f67170c8f1 468 Pfam PF02954 Bacterial regulatory protein, Fis family 419 458 1.3E-11 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VSVS12_02306 274e0e4975dd4fab6ceea1f67170c8f1 468 Gene3D G3DSA:3.40.50.2300 1 119 3.3E-34 T 11-10-2018 VSVS12_02306 274e0e4975dd4fab6ceea1f67170c8f1 468 Pfam PF00158 Sigma-54 interaction domain 134 295 4.1E-65 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VSVS12_02306 274e0e4975dd4fab6ceea1f67170c8f1 468 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 342 351 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VSVS12_02306 274e0e4975dd4fab6ceea1f67170c8f1 468 SUPERFAMILY SSF52540 137 370 1.39E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02306 274e0e4975dd4fab6ceea1f67170c8f1 468 SMART SM00382 149 296 1.3E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_02306 274e0e4975dd4fab6ceea1f67170c8f1 468 SUPERFAMILY SSF46689 342 459 6.27E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_02306 274e0e4975dd4fab6ceea1f67170c8f1 468 Gene3D G3DSA:1.10.8.60 301 379 4.2E-31 T 11-10-2018 VSVS12_03420 39309567ae7a94f3007bfc2efbf952fb 604 SUPERFAMILY SSF82866 399 596 1.28E-37 T 11-10-2018 VSVS12_03420 39309567ae7a94f3007bfc2efbf952fb 604 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 128 590 8.1E-127 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 VSVS12_03420 39309567ae7a94f3007bfc2efbf952fb 604 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 340 583 1.1E-73 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VSVS12_03420 39309567ae7a94f3007bfc2efbf952fb 604 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 12 604 43.575 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 VSVS12_03420 39309567ae7a94f3007bfc2efbf952fb 604 Pfam PF13721 SecD export protein N-terminal TM region 11 104 3.6E-19 T 11-10-2018 IPR027398 SecD export protein N-terminal TM domain VSVS12_03420 39309567ae7a94f3007bfc2efbf952fb 604 Gene3D G3DSA:3.30.70.3400 225 426 1.2E-44 T 11-10-2018 VSVS12_03420 39309567ae7a94f3007bfc2efbf952fb 604 Gene3D G3DSA:3.30.1360.200 283 420 1.2E-44 T 11-10-2018 VSVS12_03420 39309567ae7a94f3007bfc2efbf952fb 604 Pfam PF07549 SecD/SecF GG Motif 121 145 1.8E-5 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VSVS12_03420 39309567ae7a94f3007bfc2efbf952fb 604 Pfam PF02355 Protein export membrane protein 422 590 6.8E-19 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VSVS12_03713 884cfc942336cbfac1a2d70ed4dd7676 504 PIRSF PIRSF002741 3 498 1.2E-58 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VSVS12_03713 884cfc942336cbfac1a2d70ed4dd7676 504 SUPERFAMILY SSF53850 34 491 6.52E-89 T 11-10-2018 VSVS12_03713 884cfc942336cbfac1a2d70ed4dd7676 504 Gene3D G3DSA:3.40.190.10 73 487 4.1E-84 T 11-10-2018 VSVS12_03713 884cfc942336cbfac1a2d70ed4dd7676 504 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 87 108 - T 11-10-2018 IPR023765 Solute-binding protein family 5, conserved site VSVS12_03713 884cfc942336cbfac1a2d70ed4dd7676 504 Gene3D G3DSA:3.10.105.10 267 475 4.1E-84 T 11-10-2018 VSVS12_03713 884cfc942336cbfac1a2d70ed4dd7676 504 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 425 1.2E-57 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain VSVS12_01269 477128467311d7c811b1ac0c58c4cc25 294 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 38 294 1.1E-90 T 11-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 VSVS12_02812 e202594c619898b9f69795d0ca5d94a9 159 Gene3D G3DSA:3.10.450.430 9 159 7.9E-52 T 11-10-2018 VSVS12_02812 e202594c619898b9f69795d0ca5d94a9 159 Pfam PF10980 Protein of unknown function (DUF2787) 23 156 3.4E-44 T 11-10-2018 IPR021248 Protein of unknown function DUF2787 VSVS12_02173 c071d04d2b6081963059f7f1d3ca12aa 288 Pfam PF01904 Protein of unknown function DUF72 23 262 9.5E-55 T 11-10-2018 IPR002763 Protein of unknown function DUF72 VSVS12_02173 c071d04d2b6081963059f7f1d3ca12aa 288 SUPERFAMILY SSF117396 4 265 1.44E-72 T 11-10-2018 IPR036520 UPF0759 superfamily VSVS12_02173 c071d04d2b6081963059f7f1d3ca12aa 288 Gene3D G3DSA:3.20.20.410 2 268 5.1E-44 T 11-10-2018 IPR036520 UPF0759 superfamily VSVS12_03044 5efb0819eacb633800a218fddfa217ed 350 Gene3D G3DSA:3.40.50.300 84 255 9.7E-44 T 11-10-2018 VSVS12_03044 5efb0819eacb633800a218fddfa217ed 350 Gene3D G3DSA:1.10.40.50 256 344 3.8E-21 T 11-10-2018 VSVS12_03044 5efb0819eacb633800a218fddfa217ed 350 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 32 319 31.389 T 11-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 VSVS12_03044 5efb0819eacb633800a218fddfa217ed 350 Pfam PF03193 RsgA GTPase 82 255 7.3E-50 T 11-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 VSVS12_03044 5efb0819eacb633800a218fddfa217ed 350 SUPERFAMILY SSF52540 100 317 2.49E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03044 5efb0819eacb633800a218fddfa217ed 350 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 66 312 8.7E-48 T 11-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 VSVS12_02927 af2ee7d174b3c4c2c4cd3f90067da3d8 295 Pfam PF00892 EamA-like transporter family 4 135 3.7E-17 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VSVS12_02927 af2ee7d174b3c4c2c4cd3f90067da3d8 295 Pfam PF00892 EamA-like transporter family 157 294 5.3E-17 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VSVS12_02927 af2ee7d174b3c4c2c4cd3f90067da3d8 295 SUPERFAMILY SSF103481 214 294 8.89E-10 T 11-10-2018 VSVS12_02927 af2ee7d174b3c4c2c4cd3f90067da3d8 295 SUPERFAMILY SSF103481 36 141 4.71E-14 T 11-10-2018 VSVS12_01561 fffed89335b0a89018d27eb5898b6034 576 Gene3D G3DSA:2.40.50.100 130 173 3.5E-7 T 11-10-2018 VSVS12_01561 fffed89335b0a89018d27eb5898b6034 576 Pfam PF11604 Copper binding periplasmic protein CusF 419 486 5.5E-23 T 11-10-2018 IPR021647 Copper binding periplasmic protein CusF VSVS12_01561 fffed89335b0a89018d27eb5898b6034 576 Pfam PF11604 Copper binding periplasmic protein CusF 498 562 2.5E-15 T 11-10-2018 IPR021647 Copper binding periplasmic protein CusF VSVS12_01561 fffed89335b0a89018d27eb5898b6034 576 Gene3D G3DSA:2.40.420.20 324 414 5.2E-22 T 11-10-2018 VSVS12_01561 fffed89335b0a89018d27eb5898b6034 576 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 101 393 4.1E-33 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VSVS12_01561 fffed89335b0a89018d27eb5898b6034 576 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 111 319 3.8E-76 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VSVS12_01561 fffed89335b0a89018d27eb5898b6034 576 Gene3D G3DSA:1.10.287.470 184 196 4.2E-27 T 11-10-2018 VSVS12_01561 fffed89335b0a89018d27eb5898b6034 576 SUPERFAMILY SSF111369 134 323 1.12E-16 T 11-10-2018 VSVS12_01561 fffed89335b0a89018d27eb5898b6034 576 Gene3D G3DSA:2.40.30.170 247 320 4.2E-27 T 11-10-2018 VSVS12_01561 fffed89335b0a89018d27eb5898b6034 576 Gene3D G3DSA:2.40.50.100 197 246 4.2E-27 T 11-10-2018 VSVS12_01561 fffed89335b0a89018d27eb5898b6034 576 Gene3D G3DSA:2.40.50.320 415 488 2.2E-21 T 11-10-2018 VSVS12_01561 fffed89335b0a89018d27eb5898b6034 576 Gene3D G3DSA:2.40.50.320 494 564 1.6E-10 T 11-10-2018 VSVS12_00276 76c80dced5d0dd7bd77f24262377d490 349 Gene3D G3DSA:3.30.565.10 192 348 4.2E-42 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_00276 76c80dced5d0dd7bd77f24262377d490 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 282 296 5.4E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_00276 76c80dced5d0dd7bd77f24262377d490 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 347 5.4E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_00276 76c80dced5d0dd7bd77f24262377d490 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 311 329 5.4E-11 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_00276 76c80dced5d0dd7bd77f24262377d490 349 SUPERFAMILY SSF55874 198 347 2.88E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_00276 76c80dced5d0dd7bd77f24262377d490 349 Pfam PF00989 PAS fold 9 106 2.1E-13 T 11-10-2018 IPR013767 PAS fold GO:0006355 VSVS12_00276 76c80dced5d0dd7bd77f24262377d490 349 SUPERFAMILY SSF47384 125 190 1.61E-12 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VSVS12_00276 76c80dced5d0dd7bd77f24262377d490 349 SUPERFAMILY SSF55785 16 121 4.54E-9 T 11-10-2018 IPR035965 PAS domain superfamily VSVS12_00276 76c80dced5d0dd7bd77f24262377d490 349 SMART SM00388 129 194 2.0E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_00276 76c80dced5d0dd7bd77f24262377d490 349 Gene3D G3DSA:1.10.287.130 133 191 4.1E-14 T 11-10-2018 VSVS12_00276 76c80dced5d0dd7bd77f24262377d490 349 SMART SM00387 233 349 2.5E-28 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_00276 76c80dced5d0dd7bd77f24262377d490 349 Pfam PF00512 His Kinase A (phospho-acceptor) domain 133 190 4.9E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_00276 76c80dced5d0dd7bd77f24262377d490 349 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 9 120 6.7E-7 T 11-10-2018 IPR000014 PAS domain VSVS12_00276 76c80dced5d0dd7bd77f24262377d490 349 Gene3D G3DSA:3.30.450.20 2 112 1.9E-26 T 11-10-2018 VSVS12_00276 76c80dced5d0dd7bd77f24262377d490 349 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 347 1.4E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_00276 76c80dced5d0dd7bd77f24262377d490 349 SMART SM00091 4 72 0.0057 T 11-10-2018 IPR000014 PAS domain VSVS12_02086 388e5cb272c2d786f8ea07b8deedbd2e 424 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 239 276 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VSVS12_02086 388e5cb272c2d786f8ea07b8deedbd2e 424 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 10 418 2.5E-178 T 11-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 VSVS12_02086 388e5cb272c2d786f8ea07b8deedbd2e 424 PIRSF PIRSF000521 21 420 1.4E-36 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VSVS12_02086 388e5cb272c2d786f8ea07b8deedbd2e 424 Pfam PF00202 Aminotransferase class-III 24 418 8.7E-129 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VSVS12_02086 388e5cb272c2d786f8ea07b8deedbd2e 424 Gene3D G3DSA:3.90.1150.10 7 412 1.3E-170 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VSVS12_02086 388e5cb272c2d786f8ea07b8deedbd2e 424 Gene3D G3DSA:3.40.640.10 58 327 1.3E-170 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VSVS12_02086 388e5cb272c2d786f8ea07b8deedbd2e 424 SUPERFAMILY SSF53383 4 420 2.07E-132 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VSVS12_02086 388e5cb272c2d786f8ea07b8deedbd2e 424 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 421 48.26 T 11-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 VSVS12_03362 60ee9c9b6fc040a01a84bf2bfa08b479 464 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 40 378 5.6E-83 T 11-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 VSVS12_03362 60ee9c9b6fc040a01a84bf2bfa08b479 464 TIGRFAM TIGR01788 Glu-decarb-GAD: glutamate decarboxylase 13 443 3.4E-185 T 11-10-2018 IPR010107 Glutamate decarboxylase GO:0004351|GO:0006536|GO:0030170 KEGG: 00250+4.1.1.15|KEGG: 00410+4.1.1.15|KEGG: 00430+4.1.1.15|KEGG: 00650+4.1.1.15|MetaCyc: PWY-4321 VSVS12_03362 60ee9c9b6fc040a01a84bf2bfa08b479 464 Gene3D G3DSA:3.40.640.10 62 354 1.7E-77 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VSVS12_03362 60ee9c9b6fc040a01a84bf2bfa08b479 464 SUPERFAMILY SSF53383 11 446 2.25E-126 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VSVS12_03362 60ee9c9b6fc040a01a84bf2bfa08b479 464 Gene3D G3DSA:3.90.1150.160 355 462 2.8E-31 T 11-10-2018 VSVS12_00121 8941a9f060daeb21d280c32bc03edeaa 933 Gene3D G3DSA:1.20.1060.10 547 662 5.6E-44 T 11-10-2018 VSVS12_00121 8941a9f060daeb21d280c32bc03edeaa 933 Pfam PF01612 3'-5' exonuclease 334 520 7.8E-41 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VSVS12_00121 8941a9f060daeb21d280c32bc03edeaa 933 SMART SM00475 7 268 1.3E-125 T 11-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 VSVS12_00121 8941a9f060daeb21d280c32bc03edeaa 933 Gene3D G3DSA:3.40.50.1010 9 284 1.5E-96 T 11-10-2018 VSVS12_00121 8941a9f060daeb21d280c32bc03edeaa 933 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 272 2.0E-30 T 11-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 VSVS12_00121 8941a9f060daeb21d280c32bc03edeaa 933 SUPERFAMILY SSF88723 7 170 9.57E-58 T 11-10-2018 IPR029060 PIN-like domain superfamily VSVS12_00121 8941a9f060daeb21d280c32bc03edeaa 933 SMART SM00474 334 521 1.4E-42 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VSVS12_00121 8941a9f060daeb21d280c32bc03edeaa 933 SUPERFAMILY SSF56672 528 933 1.33E-158 T 11-10-2018 VSVS12_00121 8941a9f060daeb21d280c32bc03edeaa 933 ProSitePatterns PS00447 DNA polymerase family A signature. 758 777 - T 11-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VSVS12_00121 8941a9f060daeb21d280c32bc03edeaa 933 Gene3D G3DSA:3.30.70.370 668 929 4.3E-112 T 11-10-2018 VSVS12_00121 8941a9f060daeb21d280c32bc03edeaa 933 Gene3D G3DSA:1.10.150.20 713 856 4.3E-112 T 11-10-2018 VSVS12_00121 8941a9f060daeb21d280c32bc03edeaa 933 TIGRFAM TIGR00593 pola: DNA polymerase I 9 933 1.5E-283 T 11-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VSVS12_00121 8941a9f060daeb21d280c32bc03edeaa 933 SMART SM00482 690 897 1.6E-111 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VSVS12_00121 8941a9f060daeb21d280c32bc03edeaa 933 SUPERFAMILY SSF53098 337 521 2.11E-55 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_00121 8941a9f060daeb21d280c32bc03edeaa 933 Pfam PF00476 DNA polymerase family A 555 930 2.1E-156 T 11-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VSVS12_00121 8941a9f060daeb21d280c32bc03edeaa 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 849 865 2.6E-78 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VSVS12_00121 8941a9f060daeb21d280c32bc03edeaa 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 682 697 2.6E-78 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VSVS12_00121 8941a9f060daeb21d280c32bc03edeaa 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 817 828 2.6E-78 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VSVS12_00121 8941a9f060daeb21d280c32bc03edeaa 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 880 893 2.6E-78 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VSVS12_00121 8941a9f060daeb21d280c32bc03edeaa 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 704 727 2.6E-78 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VSVS12_00121 8941a9f060daeb21d280c32bc03edeaa 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 734 747 2.6E-78 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VSVS12_00121 8941a9f060daeb21d280c32bc03edeaa 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 758 783 2.6E-78 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VSVS12_00121 8941a9f060daeb21d280c32bc03edeaa 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 795 806 2.6E-78 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VSVS12_00121 8941a9f060daeb21d280c32bc03edeaa 933 PRINTS PR00868 DNA-polymerase family A (pol I) signature 659 681 2.6E-78 T 11-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VSVS12_00121 8941a9f060daeb21d280c32bc03edeaa 933 SUPERFAMILY SSF47807 171 291 1.0E-30 T 11-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily VSVS12_00121 8941a9f060daeb21d280c32bc03edeaa 933 SMART SM00279 173 208 1.2E-13 T 11-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 VSVS12_00121 8941a9f060daeb21d280c32bc03edeaa 933 Gene3D G3DSA:1.10.150.20 174 253 1.5E-96 T 11-10-2018 VSVS12_00121 8941a9f060daeb21d280c32bc03edeaa 933 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 1.2E-54 T 11-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 VSVS12_00121 8941a9f060daeb21d280c32bc03edeaa 933 Gene3D G3DSA:3.30.420.10 331 546 1.6E-70 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VSVS12_00468 e0ff59255a6b4ed0d68159bf98f62f27 822 Pfam PF00575 S1 RNA binding domain 650 731 2.1E-13 T 11-10-2018 IPR003029 S1 domain GO:0003676 VSVS12_00468 e0ff59255a6b4ed0d68159bf98f62f27 822 Pfam PF08206 Ribonuclease B OB domain 91 151 3.2E-21 T 11-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain VSVS12_00468 e0ff59255a6b4ed0d68159bf98f62f27 822 Pfam PF00773 RNB domain 267 594 2.6E-105 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 VSVS12_00468 e0ff59255a6b4ed0d68159bf98f62f27 822 SUPERFAMILY SSF50249 71 154 5.45E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_00468 e0ff59255a6b4ed0d68159bf98f62f27 822 SMART SM00316 650 733 9.6E-13 T 11-10-2018 IPR022967 RNA-binding domain, S1 VSVS12_00468 e0ff59255a6b4ed0d68159bf98f62f27 822 ProSitePatterns PS01175 Ribonuclease II family signature. 562 586 - T 11-10-2018 IPR022966 Ribonuclease II/R, conserved site VSVS12_00468 e0ff59255a6b4ed0d68159bf98f62f27 822 SUPERFAMILY SSF50249 145 244 5.57E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_00468 e0ff59255a6b4ed0d68159bf98f62f27 822 SMART SM00955 267 595 8.4E-182 T 11-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 VSVS12_00468 e0ff59255a6b4ed0d68159bf98f62f27 822 Pfam PF08461 Ribonuclease R winged-helix domain 27 88 4.7E-12 T 11-10-2018 IPR013668 Ribonuclease R winged-helix domain VSVS12_00468 e0ff59255a6b4ed0d68159bf98f62f27 822 Gene3D G3DSA:2.40.50.140 77 155 2.3E-11 T 11-10-2018 VSVS12_00468 e0ff59255a6b4ed0d68159bf98f62f27 822 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 71 733 9.5E-252 T 11-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 VSVS12_00468 e0ff59255a6b4ed0d68159bf98f62f27 822 SUPERFAMILY SSF50249 651 739 7.01E-22 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_00468 e0ff59255a6b4ed0d68159bf98f62f27 822 SUPERFAMILY SSF50249 227 650 3.54E-141 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_00468 e0ff59255a6b4ed0d68159bf98f62f27 822 TIGRFAM TIGR02063 RNase_R: ribonuclease R 23 734 8.2E-272 T 11-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 VSVS12_00468 e0ff59255a6b4ed0d68159bf98f62f27 822 Gene3D G3DSA:2.40.50.140 653 764 2.2E-25 T 11-10-2018 VSVS12_00468 e0ff59255a6b4ed0d68159bf98f62f27 822 Hamap MF_01895 Ribonuclease R [rnr]. 42 733 58.557 T 11-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 VSVS12_00468 e0ff59255a6b4ed0d68159bf98f62f27 822 SMART SM00357 90 152 3.3E-12 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 VSVS12_02396 6b024acdc4fc58539e484241d8d5236b 219 Gene3D G3DSA:1.10.3680.10 89 218 3.0E-9 T 11-10-2018 IPR029024 TerB-like VSVS12_02396 6b024acdc4fc58539e484241d8d5236b 219 SUPERFAMILY SSF158682 74 215 1.31E-25 T 11-10-2018 IPR029024 TerB-like VSVS12_02396 6b024acdc4fc58539e484241d8d5236b 219 Pfam PF04391 Protein of unknown function (DUF533) 36 215 2.8E-62 T 11-10-2018 IPR007486 Inner membrane protein YebE VSVS12_03661 d22b68e98ca635db0df79899bac1925d 533 Gene3D G3DSA:3.30.300.310 429 532 6.1E-27 T 11-10-2018 VSVS12_03661 d22b68e98ca635db0df79899bac1925d 533 SUPERFAMILY SSF56801 8 531 1.44E-121 T 11-10-2018 VSVS12_03661 d22b68e98ca635db0df79899bac1925d 533 Pfam PF00501 AMP-binding enzyme 27 434 2.5E-88 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VSVS12_03661 d22b68e98ca635db0df79899bac1925d 533 Pfam PF13193 AMP-binding enzyme C-terminal domain 442 522 3.8E-13 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VSVS12_03661 d22b68e98ca635db0df79899bac1925d 533 Gene3D G3DSA:3.40.50.12780 2 428 2.1E-101 T 11-10-2018 VSVS12_03913 7c6a14ce16debeca1db9201a7cd52472 261 Gene3D G3DSA:3.30.2010.10 48 138 8.4E-7 T 11-10-2018 VSVS12_03913 7c6a14ce16debeca1db9201a7cd52472 261 Pfam PF01435 Peptidase family M48 56 245 2.1E-44 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 VSVS12_02686 f2426b1c548fe21b8a79bb6ea47c26b8 135 SUPERFAMILY SSF54593 3 133 5.17E-32 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VSVS12_02686 f2426b1c548fe21b8a79bb6ea47c26b8 135 Gene3D G3DSA:3.10.180.10 1 135 2.9E-39 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VSVS12_02686 f2426b1c548fe21b8a79bb6ea47c26b8 135 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 4 128 3.3E-11 T 11-10-2018 IPR028973 PhnB-like VSVS12_02443 471cd25708cd81d195b945a2660044ce 443 Pfam PF02601 Exonuclease VII, large subunit 126 440 5.4E-101 T 11-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 VSVS12_02443 471cd25708cd81d195b945a2660044ce 443 Pfam PF13742 OB-fold nucleic acid binding domain 10 103 9.0E-30 T 11-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 VSVS12_02443 471cd25708cd81d195b945a2660044ce 443 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 7 443 30.788 T 11-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 VSVS12_02443 471cd25708cd81d195b945a2660044ce 443 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 357 4.2E-134 T 11-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 VSVS12_02290 4a49f364d28ac66e18eee661443a55a6 176 Pfam PF01713 Smr domain 97 171 9.5E-17 T 11-10-2018 IPR002625 Smr domain VSVS12_02290 4a49f364d28ac66e18eee661443a55a6 176 SMART SM00463 94 172 3.4E-15 T 11-10-2018 IPR002625 Smr domain VSVS12_02290 4a49f364d28ac66e18eee661443a55a6 176 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 173 38.955 T 11-10-2018 IPR022990 Uncharacterised protein family UPF0115 VSVS12_02290 4a49f364d28ac66e18eee661443a55a6 176 SUPERFAMILY SSF160443 95 171 5.23E-11 T 11-10-2018 IPR036063 Smr domain superfamily VSVS12_02290 4a49f364d28ac66e18eee661443a55a6 176 Gene3D G3DSA:3.30.1370.110 49 175 1.3E-26 T 11-10-2018 VSVS12_03495 72396405d82a5130d2a7f47cb0cb5b20 102 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 1 100 1.5E-22 T 11-10-2018 IPR000160 GGDEF domain VSVS12_03495 72396405d82a5130d2a7f47cb0cb5b20 102 Gene3D G3DSA:3.30.70.270 1 102 3.1E-26 T 11-10-2018 VSVS12_03495 72396405d82a5130d2a7f47cb0cb5b20 102 Pfam PF00990 Diguanylate cyclase, GGDEF domain 1 101 2.8E-20 T 11-10-2018 IPR000160 GGDEF domain VSVS12_03495 72396405d82a5130d2a7f47cb0cb5b20 102 SUPERFAMILY SSF55073 1 100 2.28E-24 T 11-10-2018 IPR029787 Nucleotide cyclase VSVS12_04208 01ec8bff857a4a62b4f7281999b61385 251 Pfam PF00563 EAL domain 23 229 1.7E-23 T 11-10-2018 IPR001633 EAL domain VSVS12_04208 01ec8bff857a4a62b4f7281999b61385 251 SMART SM00052 10 234 2.5E-5 T 11-10-2018 IPR001633 EAL domain VSVS12_04208 01ec8bff857a4a62b4f7281999b61385 251 Gene3D G3DSA:3.20.20.450 16 242 1.7E-26 T 11-10-2018 IPR035919 EAL domain superfamily VSVS12_04208 01ec8bff857a4a62b4f7281999b61385 251 SUPERFAMILY SSF141868 23 240 3.01E-28 T 11-10-2018 IPR035919 EAL domain superfamily VSVS12_00152 3e3b0c7538c92b7323beeb34af878bef 1058 SUPERFAMILY SSF55785 481 605 1.19E-19 T 11-10-2018 IPR035965 PAS domain superfamily VSVS12_00152 3e3b0c7538c92b7323beeb34af878bef 1058 Gene3D G3DSA:3.30.70.270 607 778 2.4E-45 T 11-10-2018 VSVS12_00152 3e3b0c7538c92b7323beeb34af878bef 1058 Pfam PF00990 Diguanylate cyclase, GGDEF domain 618 775 2.7E-35 T 11-10-2018 IPR000160 GGDEF domain VSVS12_00152 3e3b0c7538c92b7323beeb34af878bef 1058 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 615 777 9.3E-33 T 11-10-2018 IPR000160 GGDEF domain VSVS12_00152 3e3b0c7538c92b7323beeb34af878bef 1058 Gene3D G3DSA:3.40.50.2300 141 303 5.3E-6 T 11-10-2018 VSVS12_00152 3e3b0c7538c92b7323beeb34af878bef 1058 SUPERFAMILY SSF141868 797 1045 1.44E-72 T 11-10-2018 IPR035919 EAL domain superfamily VSVS12_00152 3e3b0c7538c92b7323beeb34af878bef 1058 SMART SM00267 607 779 5.8E-46 T 11-10-2018 IPR000160 GGDEF domain VSVS12_00152 3e3b0c7538c92b7323beeb34af878bef 1058 Pfam PF13426 PAS domain 385 482 0.018 T 11-10-2018 IPR000014 PAS domain VSVS12_00152 3e3b0c7538c92b7323beeb34af878bef 1058 Pfam PF13426 PAS domain 507 605 4.8E-11 T 11-10-2018 IPR000014 PAS domain VSVS12_00152 3e3b0c7538c92b7323beeb34af878bef 1058 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 493 612 2.5E-15 T 11-10-2018 IPR000014 PAS domain VSVS12_00152 3e3b0c7538c92b7323beeb34af878bef 1058 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 375 491 1.5E-6 T 11-10-2018 IPR000014 PAS domain VSVS12_00152 3e3b0c7538c92b7323beeb34af878bef 1058 SUPERFAMILY SSF55073 623 779 2.82E-38 T 11-10-2018 IPR029787 Nucleotide cyclase VSVS12_00152 3e3b0c7538c92b7323beeb34af878bef 1058 Gene3D G3DSA:3.40.50.2300 81 294 5.3E-6 T 11-10-2018 VSVS12_00152 3e3b0c7538c92b7323beeb34af878bef 1058 SMART SM00091 496 562 1.3E-4 T 11-10-2018 IPR000014 PAS domain VSVS12_00152 3e3b0c7538c92b7323beeb34af878bef 1058 SMART SM00091 370 436 11.0 T 11-10-2018 IPR000014 PAS domain VSVS12_00152 3e3b0c7538c92b7323beeb34af878bef 1058 Pfam PF00563 EAL domain 797 1033 1.3E-61 T 11-10-2018 IPR001633 EAL domain VSVS12_00152 3e3b0c7538c92b7323beeb34af878bef 1058 SUPERFAMILY SSF55785 356 482 1.92E-8 T 11-10-2018 IPR035965 PAS domain superfamily VSVS12_00152 3e3b0c7538c92b7323beeb34af878bef 1058 SMART SM00052 791 1038 3.1E-66 T 11-10-2018 IPR001633 EAL domain VSVS12_00152 3e3b0c7538c92b7323beeb34af878bef 1058 Gene3D G3DSA:3.20.20.450 779 1040 2.3E-79 T 11-10-2018 IPR035919 EAL domain superfamily VSVS12_00152 3e3b0c7538c92b7323beeb34af878bef 1058 Gene3D G3DSA:3.30.450.20 356 482 1.0E-7 T 11-10-2018 VSVS12_00152 3e3b0c7538c92b7323beeb34af878bef 1058 Gene3D G3DSA:3.30.450.20 483 605 4.0E-19 T 11-10-2018 VSVS12_00803 a29ab51d2d7f067ec8fbaf86db8dff04 136 Gene3D G3DSA:1.10.10.60 19 106 5.4E-6 T 11-10-2018 VSVS12_00803 a29ab51d2d7f067ec8fbaf86db8dff04 136 SUPERFAMILY SSF46689 13 110 1.63E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_00785 a29ab51d2d7f067ec8fbaf86db8dff04 136 Gene3D G3DSA:1.10.10.60 19 106 5.4E-6 T 11-10-2018 VSVS12_00785 a29ab51d2d7f067ec8fbaf86db8dff04 136 SUPERFAMILY SSF46689 13 110 1.63E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_01861 a29ab51d2d7f067ec8fbaf86db8dff04 136 Gene3D G3DSA:1.10.10.60 19 106 5.4E-6 T 11-10-2018 VSVS12_01861 a29ab51d2d7f067ec8fbaf86db8dff04 136 SUPERFAMILY SSF46689 13 110 1.63E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_03710 d361f4ca50648c07dd444b28a6c07f45 434 TIGRFAM TIGR00797 matE: MATE efflux family protein 14 408 4.6E-65 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VSVS12_03710 d361f4ca50648c07dd444b28a6c07f45 434 Pfam PF01554 MatE 244 397 4.7E-17 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VSVS12_03710 d361f4ca50648c07dd444b28a6c07f45 434 Pfam PF01554 MatE 14 174 6.8E-17 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VSVS12_03379 0effbc90a5069f321a6943e71b95e377 294 Pfam PF06445 GyrI-like small molecule binding domain 145 291 3.9E-28 T 11-10-2018 IPR029442 GyrI-like small molecule binding domain VSVS12_03379 0effbc90a5069f321a6943e71b95e377 294 SMART SM00871 142 292 2.7E-17 T 11-10-2018 IPR010499 Bacterial transcription activator, effector binding VSVS12_03379 0effbc90a5069f321a6943e71b95e377 294 SMART SM00342 28 112 1.4E-27 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VSVS12_03379 0effbc90a5069f321a6943e71b95e377 294 SUPERFAMILY SSF46689 65 115 2.91E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_03379 0effbc90a5069f321a6943e71b95e377 294 SUPERFAMILY SSF46689 11 62 9.86E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_03379 0effbc90a5069f321a6943e71b95e377 294 Gene3D G3DSA:3.20.80.10 143 292 8.0E-28 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VSVS12_03379 0effbc90a5069f321a6943e71b95e377 294 SUPERFAMILY SSF55136 145 291 3.66E-25 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VSVS12_03379 0effbc90a5069f321a6943e71b95e377 294 Gene3D G3DSA:1.10.10.60 4 61 2.8E-15 T 11-10-2018 VSVS12_03379 0effbc90a5069f321a6943e71b95e377 294 Gene3D G3DSA:1.10.10.60 62 116 6.5E-17 T 11-10-2018 VSVS12_03379 0effbc90a5069f321a6943e71b95e377 294 Pfam PF12833 Helix-turn-helix domain 34 113 1.5E-25 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VSVS12_03379 0effbc90a5069f321a6943e71b95e377 294 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 81 96 5.6E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VSVS12_03379 0effbc90a5069f321a6943e71b95e377 294 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 96 112 5.6E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VSVS12_03851 b4c473360c57bc0eaff585c261b0df13 333 Gene3D G3DSA:3.40.50.2300 141 327 1.1E-107 T 11-10-2018 VSVS12_03851 b4c473360c57bc0eaff585c261b0df13 333 Gene3D G3DSA:3.40.50.2300 34 303 1.1E-107 T 11-10-2018 VSVS12_03851 b4c473360c57bc0eaff585c261b0df13 333 SUPERFAMILY SSF53822 31 297 2.57E-31 T 11-10-2018 IPR028082 Periplasmic binding protein-like I VSVS12_03851 b4c473360c57bc0eaff585c261b0df13 333 TIGRFAM TIGR02955 TMAO_TorT: TMAO reductase system periplasmic protein TorT 33 330 3.6E-133 T 11-10-2018 IPR014301 TMAO reductase system, periplasmic protein TorT VSVS12_03851 b4c473360c57bc0eaff585c261b0df13 333 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 33 303 8.2E-30 T 11-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain VSVS12_04403 fef4a238cb099abe1e96ac4fcb5ea2e5 135 Pfam PF12101 Protein of unknown function (DUF3577) 5 132 7.9E-34 T 11-10-2018 IPR021960 Protein of unknown function DUF3577 VSVS12_03546 aad2d10d0bc57a32b8dc19abfb1c6afa 507 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 18 444 8.5E-140 T 11-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane VSVS12_00008 bf21ed4b522724f464260552af3b096d 179 SUPERFAMILY SSF64288 9 174 3.34E-43 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VSVS12_00008 bf21ed4b522724f464260552af3b096d 179 Gene3D G3DSA:3.40.1410.10 8 174 9.8E-40 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VSVS12_00008 bf21ed4b522724f464260552af3b096d 179 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 15 174 23.837 T 11-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 VSVS12_00008 bf21ed4b522724f464260552af3b096d 179 Pfam PF04345 Chorismate lyase 12 178 6.2E-55 T 11-10-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745|MetaCyc: PWY-7929|MetaCyc: PWY-7934|MetaCyc: PWY-7935 VSVS12_00110 677b7b6a46ad716a83720865ba7133cb 361 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 57 262 5.3E-26 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VSVS12_00110 677b7b6a46ad716a83720865ba7133cb 361 Gene3D G3DSA:2.40.420.20 273 344 1.7E-69 T 11-10-2018 VSVS12_00110 677b7b6a46ad716a83720865ba7133cb 361 Gene3D G3DSA:1.10.287.470 96 155 1.7E-69 T 11-10-2018 VSVS12_00110 677b7b6a46ad716a83720865ba7133cb 361 Gene3D G3DSA:2.40.30.170 51 272 1.7E-69 T 11-10-2018 VSVS12_00110 677b7b6a46ad716a83720865ba7133cb 361 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 37 346 2.0E-70 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VSVS12_00110 677b7b6a46ad716a83720865ba7133cb 361 Gene3D G3DSA:2.40.50.100 61 189 1.7E-69 T 11-10-2018 VSVS12_00110 677b7b6a46ad716a83720865ba7133cb 361 SUPERFAMILY SSF111369 51 266 2.75E-39 T 11-10-2018 VSVS12_01735 adf91126cc65d688a5a9be0ad00ecc19 67 Pfam PF14255 Cysteine-rich CPXCG 10 60 1.6E-19 T 11-10-2018 IPR025990 Cysteine-rich CPXCG protein VSVS12_01735 adf91126cc65d688a5a9be0ad00ecc19 67 PIRSF PIRSF037225 1 65 1.4E-23 T 11-10-2018 IPR017143 Uncharacterised conserved protein UCP037225 VSVS12_01804 995b9a49db81490a1f10eaea05450bfc 253 PIRSF PIRSF028069 1 253 1.0E-101 T 11-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 VSVS12_01804 995b9a49db81490a1f10eaea05450bfc 253 Pfam PF11932 Protein of unknown function (DUF3450) 8 247 1.5E-85 T 11-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 VSVS12_01117 fe3f00cf38c3c843705bfd70a8032fbc 213 Pfam PF01914 MarC family integral membrane protein 8 208 3.3E-64 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VSVS12_01117 fe3f00cf38c3c843705bfd70a8032fbc 213 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 3 204 4.5E-66 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VSVS12_00109 2535205ee8dfd7f848181be357a6df0c 193 ProSitePatterns PS01081 TetR-type HTH domain signature. 25 56 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VSVS12_00109 2535205ee8dfd7f848181be357a6df0c 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 4.5E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VSVS12_00109 2535205ee8dfd7f848181be357a6df0c 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 4.5E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VSVS12_00109 2535205ee8dfd7f848181be357a6df0c 193 Pfam PF16295 Tetracycline repressor, C-terminal all-alpha domain 65 190 1.8E-6 T 11-10-2018 IPR032551 HTH-type transcriptional repressor, C-terminal VSVS12_00109 2535205ee8dfd7f848181be357a6df0c 193 SUPERFAMILY SSF46689 7 80 1.2E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_00109 2535205ee8dfd7f848181be357a6df0c 193 Gene3D G3DSA:1.10.357.10 2 193 4.8E-67 T 11-10-2018 VSVS12_00109 2535205ee8dfd7f848181be357a6df0c 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 3.0E-18 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VSVS12_03567 a49eee984ee6f0141ca1515c6d5431b0 159 Gene3D G3DSA:3.30.565.10 8 159 5.7E-20 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_03567 a49eee984ee6f0141ca1515c6d5431b0 159 Pfam PF13581 Histidine kinase-like ATPase domain 14 150 4.1E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_03567 a49eee984ee6f0141ca1515c6d5431b0 159 SUPERFAMILY SSF55874 36 149 3.3E-10 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_04319 ce20b21a6cadecfa46691939a4cf2cc7 243 SUPERFAMILY SSF53167 4 221 1.44E-67 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 VSVS12_04319 ce20b21a6cadecfa46691939a4cf2cc7 243 Pfam PF01048 Phosphorylase superfamily 17 200 5.4E-34 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VSVS12_04319 ce20b21a6cadecfa46691939a4cf2cc7 243 Gene3D G3DSA:3.40.50.1580 2 242 5.1E-76 T 11-10-2018 VSVS12_02546 e5dfbc6d5790c57a698d15ba102c3da8 125 Pfam PF01228 Glycine radical 16 106 1.4E-22 T 11-10-2018 IPR001150 Glycine radical domain GO:0003824 VSVS12_02546 e5dfbc6d5790c57a698d15ba102c3da8 125 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 125 41.473 T 11-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA VSVS12_02546 e5dfbc6d5790c57a698d15ba102c3da8 125 PIRSF PIRSF000378 2 125 2.0E-54 T 11-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA VSVS12_02546 e5dfbc6d5790c57a698d15ba102c3da8 125 ProSitePatterns PS00850 Glycine radical domain signature. 95 103 - T 11-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VSVS12_02546 e5dfbc6d5790c57a698d15ba102c3da8 125 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 125 2.0E-67 T 11-10-2018 IPR011140 Autonomous glycyl radical cofactor GrcA VSVS12_02546 e5dfbc6d5790c57a698d15ba102c3da8 125 SUPERFAMILY SSF51998 64 124 3.71E-23 T 11-10-2018 VSVS12_02546 e5dfbc6d5790c57a698d15ba102c3da8 125 Gene3D G3DSA:3.20.70.20 28 125 7.8E-25 T 11-10-2018 VSVS12_00956 ad1ccb31596594b79ca081d672f228f7 221 Gene3D G3DSA:2.40.160.40 28 221 6.6E-15 T 11-10-2018 VSVS12_00956 ad1ccb31596594b79ca081d672f228f7 221 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 23 221 5.2E-9 T 11-10-2018 IPR009331 Oligogalacturonate-specific porin VSVS12_02038 00de4669c17b2a24b70a771c963c4250 431 Pfam PF00209 Sodium:neurotransmitter symporter family 129 430 3.5E-28 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VSVS12_02038 00de4669c17b2a24b70a771c963c4250 431 Pfam PF00209 Sodium:neurotransmitter symporter family 1 99 6.4E-15 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VSVS12_02038 00de4669c17b2a24b70a771c963c4250 431 SUPERFAMILY SSF161070 1 430 4.58E-109 T 11-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 VSVS12_04397 6138daf0c2d5322073df8d4f83941d8d 283 SUPERFAMILY SSF56219 31 279 2.88E-34 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VSVS12_04397 6138daf0c2d5322073df8d4f83941d8d 283 Gene3D G3DSA:3.60.10.10 32 282 2.7E-41 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VSVS12_04397 6138daf0c2d5322073df8d4f83941d8d 283 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 39 245 1.1E-10 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase VSVS12_04523 6138daf0c2d5322073df8d4f83941d8d 283 SUPERFAMILY SSF56219 31 279 2.88E-34 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VSVS12_04523 6138daf0c2d5322073df8d4f83941d8d 283 Gene3D G3DSA:3.60.10.10 32 282 2.7E-41 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VSVS12_04523 6138daf0c2d5322073df8d4f83941d8d 283 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 39 245 1.1E-10 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase VSVS12_00678 2b52b8153a4dec9d174bbd3c891b664b 300 SUPERFAMILY SSF52374 1 280 1.77E-104 T 11-10-2018 VSVS12_00678 2b52b8153a4dec9d174bbd3c891b664b 300 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 39.423 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 VSVS12_00678 2b52b8153a4dec9d174bbd3c891b664b 300 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 1 280 3.6E-105 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 VSVS12_00678 2b52b8153a4dec9d174bbd3c891b664b 300 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 24 62 7.1E-9 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VSVS12_00678 2b52b8153a4dec9d174bbd3c891b664b 300 Gene3D G3DSA:3.30.1300.10 180 283 7.0E-27 T 11-10-2018 VSVS12_00678 2b52b8153a4dec9d174bbd3c891b664b 300 Gene3D G3DSA:3.40.50.620 1 179 2.0E-77 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VSVS12_00678 2b52b8153a4dec9d174bbd3c891b664b 300 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 1.3E-99 T 11-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 VSVS12_04288 ec0ab0f21cdddf0e24103863741a5a21 279 SUPERFAMILY SSF55073 156 267 1.41E-13 T 11-10-2018 IPR029787 Nucleotide cyclase VSVS12_04288 ec0ab0f21cdddf0e24103863741a5a21 279 Pfam PF00990 Diguanylate cyclase, GGDEF domain 158 263 2.4E-10 T 11-10-2018 IPR000160 GGDEF domain VSVS12_04288 ec0ab0f21cdddf0e24103863741a5a21 279 SMART SM00267 124 271 7.9E-5 T 11-10-2018 IPR000160 GGDEF domain VSVS12_04288 ec0ab0f21cdddf0e24103863741a5a21 279 Gene3D G3DSA:3.30.70.270 123 270 6.2E-12 T 11-10-2018 VSVS12_03190 ef1f413fa9a99634d789ea411d42b9c9 405 Pfam PF13614 AAA domain 110 295 4.7E-23 T 11-10-2018 IPR025669 AAA domain VSVS12_03190 ef1f413fa9a99634d789ea411d42b9c9 405 Gene3D G3DSA:3.40.50.300 109 397 3.2E-56 T 11-10-2018 VSVS12_03190 ef1f413fa9a99634d789ea411d42b9c9 405 Gene3D G3DSA:1.10.1660.30 36 102 3.0E-5 T 11-10-2018 VSVS12_03190 ef1f413fa9a99634d789ea411d42b9c9 405 SUPERFAMILY SSF52540 108 368 5.47E-32 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02786 8bbc036f7f07ac1c6503d1ffa3b61dde 117 Pfam PF02152 Dihydroneopterin aldolase 4 113 8.7E-31 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 VSVS12_02786 8bbc036f7f07ac1c6503d1ffa3b61dde 117 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 114 1.9E-27 T 11-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 VSVS12_02786 8bbc036f7f07ac1c6503d1ffa3b61dde 117 SUPERFAMILY SSF55620 1 115 1.56E-35 T 11-10-2018 VSVS12_02786 8bbc036f7f07ac1c6503d1ffa3b61dde 117 SMART SM00905 4 114 5.6E-46 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 VSVS12_02786 8bbc036f7f07ac1c6503d1ffa3b61dde 117 TIGRFAM TIGR00526 folB_dom: FolB domain 1 115 1.3E-34 T 11-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 VSVS12_02786 8bbc036f7f07ac1c6503d1ffa3b61dde 117 Gene3D G3DSA:3.30.1130.10 1 116 4.7E-44 T 11-10-2018 VSVS12_02560 9f9de500f21a05a554755619e3e9c5cf 486 Gene3D G3DSA:3.40.1190.10 111 325 5.7E-84 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VSVS12_02560 9f9de500f21a05a554755619e3e9c5cf 486 SUPERFAMILY SSF53244 326 474 1.14E-47 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VSVS12_02560 9f9de500f21a05a554755619e3e9c5cf 486 Pfam PF02875 Mur ligase family, glutamate ligase domain 329 415 1.8E-20 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VSVS12_02560 9f9de500f21a05a554755619e3e9c5cf 486 Pfam PF08245 Mur ligase middle domain 127 307 6.1E-29 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VSVS12_02560 9f9de500f21a05a554755619e3e9c5cf 486 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 25 473 4.8E-189 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VSVS12_02560 9f9de500f21a05a554755619e3e9c5cf 486 SUPERFAMILY SSF51984 23 109 1.57E-29 T 11-10-2018 VSVS12_02560 9f9de500f21a05a554755619e3e9c5cf 486 SUPERFAMILY SSF53623 108 321 1.27E-72 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VSVS12_02560 9f9de500f21a05a554755619e3e9c5cf 486 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 22 479 43.607 T 11-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VSVS12_02560 9f9de500f21a05a554755619e3e9c5cf 486 Gene3D G3DSA:3.40.50.720 23 110 1.0E-34 T 11-10-2018 VSVS12_02560 9f9de500f21a05a554755619e3e9c5cf 486 Gene3D G3DSA:3.90.190.20 326 482 1.1E-48 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VSVS12_02560 9f9de500f21a05a554755619e3e9c5cf 486 Pfam PF01225 Mur ligase family, catalytic domain 25 121 1.9E-29 T 11-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 VSVS12_03446 8db3c506f1561c42efe21f791d652dfa 294 Pfam PF01734 Patatin-like phospholipase 18 184 1.5E-18 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 VSVS12_03446 8db3c506f1561c42efe21f791d652dfa 294 SUPERFAMILY SSF52151 16 237 2.51E-35 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VSVS12_03446 8db3c506f1561c42efe21f791d652dfa 294 Gene3D G3DSA:3.40.1090.10 96 241 1.6E-11 T 11-10-2018 VSVS12_03581 7862467ac3ead98e542c2b4424d999b1 264 SUPERFAMILY SSF56534 3 243 6.54E-94 T 11-10-2018 IPR036329 Aromatic amino acid monoxygenase, C-terminal domain superfamily VSVS12_03581 7862467ac3ead98e542c2b4424d999b1 264 Gene3D G3DSA:1.10.800.10 1 264 8.5E-97 T 11-10-2018 IPR036951 Aromatic amino acid hydroxylase superfamily GO:0004497|GO:0005506|GO:0009072|GO:0055114 VSVS12_03581 7862467ac3ead98e542c2b4424d999b1 264 ProSitePatterns PS00367 Biopterin-dependent aromatic amino acid hydroxylases signature. 115 126 - T 11-10-2018 IPR018301 Aromatic amino acid hydroxylase, iron/copper binding site GO:0004497|GO:0005506|GO:0009072|GO:0055114 VSVS12_03581 7862467ac3ead98e542c2b4424d999b1 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 72 94 1.8E-10 T 11-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 VSVS12_03581 7862467ac3ead98e542c2b4424d999b1 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 208 227 1.8E-10 T 11-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 VSVS12_03581 7862467ac3ead98e542c2b4424d999b1 264 PRINTS PR00372 Biopterin-dependent aromatic amino acid hydroxylase signature 176 194 1.8E-10 T 11-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 VSVS12_03581 7862467ac3ead98e542c2b4424d999b1 264 TIGRFAM TIGR01267 Phe4hydrox_mono: phenylalanine-4-hydroxylase 10 251 7.7E-94 T 11-10-2018 IPR005960 Phenylalanine-4-hydroxylase, monomeric form GO:0004505|GO:0006559|GO:0055114 KEGG: 00360+1.14.16.1|KEGG: 00400+1.14.16.1|KEGG: 00790+1.14.16.1|MetaCyc: PWY-6134|MetaCyc: PWY-7158 VSVS12_03581 7862467ac3ead98e542c2b4424d999b1 264 Pfam PF00351 Biopterin-dependent aromatic amino acid hydroxylase 13 230 2.1E-47 T 11-10-2018 IPR019774 Aromatic amino acid hydroxylase, C-terminal GO:0016714|GO:0055114 VSVS12_02453 59eb4df587daecaa3c3d2be92ad51270 147 Gene3D G3DSA:3.90.1010.10 3 147 6.3E-49 T 11-10-2018 VSVS12_02453 59eb4df587daecaa3c3d2be92ad51270 147 SUPERFAMILY SSF82649 16 146 9.94E-48 T 11-10-2018 VSVS12_02453 59eb4df587daecaa3c3d2be92ad51270 147 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 16 146 1.3E-43 T 11-10-2018 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE VSVS12_02453 59eb4df587daecaa3c3d2be92ad51270 147 Pfam PF02657 Fe-S metabolism associated domain 26 144 3.1E-45 T 11-10-2018 IPR003808 Fe-S metabolism associated domain, SufE-like VSVS12_02278 7acb84ef1ce5718146264928fd69333d 378 Pfam PF11890 Domain of unknown function (DUF3410) 291 371 2.4E-27 T 11-10-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00750+1.1.1.290 VSVS12_02278 7acb84ef1ce5718146264928fd69333d 378 Gene3D G3DSA:3.40.50.720 94 259 9.2E-112 T 11-10-2018 VSVS12_02278 7acb84ef1ce5718146264928fd69333d 378 Gene3D G3DSA:3.30.1370.170 295 378 3.7E-31 T 11-10-2018 IPR038251 PdxB, dimerisation domain superfamily KEGG: 00750+1.1.1.290 VSVS12_02278 7acb84ef1ce5718146264928fd69333d 378 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 282 1.4E-22 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 VSVS12_02278 7acb84ef1ce5718146264928fd69333d 378 SUPERFAMILY SSF52283 12 110 1.91E-22 T 11-10-2018 VSVS12_02278 7acb84ef1ce5718146264928fd69333d 378 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 2 359 44.283 T 11-10-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00750+1.1.1.290 VSVS12_02278 7acb84ef1ce5718146264928fd69333d 378 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 199 215 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VSVS12_02278 7acb84ef1ce5718146264928fd69333d 378 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 258 1.6E-34 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VSVS12_02278 7acb84ef1ce5718146264928fd69333d 378 SUPERFAMILY SSF51735 94 259 2.1E-36 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_02278 7acb84ef1ce5718146264928fd69333d 378 Gene3D G3DSA:3.40.50.720 3 279 9.2E-112 T 11-10-2018 VSVS12_01250 0612f93aa497e08cf7a33dd62f9e38aa 475 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 412 429 - T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VSVS12_01250 0612f93aa497e08cf7a33dd62f9e38aa 475 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 473 4.2E-194 T 11-10-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0016021|GO:1904659 VSVS12_01250 0612f93aa497e08cf7a33dd62f9e38aa 475 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 375 458 9.3E-21 T 11-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VSVS12_01250 0612f93aa497e08cf7a33dd62f9e38aa 475 SUPERFAMILY SSF55604 399 471 5.23E-20 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VSVS12_01250 0612f93aa497e08cf7a33dd62f9e38aa 475 Pfam PF02378 Phosphotransferase system, EIIC 13 318 2.1E-74 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VSVS12_01250 0612f93aa497e08cf7a33dd62f9e38aa 475 Gene3D G3DSA:3.30.1360.60 395 475 3.9E-29 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VSVS12_01250 0612f93aa497e08cf7a33dd62f9e38aa 475 Pfam PF00367 phosphotransferase system, EIIB 402 434 1.4E-12 T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VSVS12_03861 787080419f31a31025119d98d0e59c7d 626 SMART SM00283 364 625 5.4E-70 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_03861 787080419f31a31025119d98d0e59c7d 626 SMART SM00304 295 349 2.2E-11 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_03861 787080419f31a31025119d98d0e59c7d 626 SMART SM00304 352 402 85.0 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_03861 787080419f31a31025119d98d0e59c7d 626 SUPERFAMILY SSF103190 93 175 4.0E-11 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VSVS12_03861 787080419f31a31025119d98d0e59c7d 626 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 491 520 4.6E-20 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VSVS12_03861 787080419f31a31025119d98d0e59c7d 626 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 462 489 4.6E-20 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VSVS12_03861 787080419f31a31025119d98d0e59c7d 626 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 385 414 4.6E-20 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VSVS12_03861 787080419f31a31025119d98d0e59c7d 626 Gene3D G3DSA:1.10.287.950 296 626 1.7E-70 T 11-10-2018 VSVS12_03861 787080419f31a31025119d98d0e59c7d 626 SUPERFAMILY SSF58104 317 626 1.83E-76 T 11-10-2018 VSVS12_03861 787080419f31a31025119d98d0e59c7d 626 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 436 592 6.2E-41 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_03861 787080419f31a31025119d98d0e59c7d 626 Gene3D G3DSA:3.30.450.20 65 169 4.1E-46 T 11-10-2018 VSVS12_03861 787080419f31a31025119d98d0e59c7d 626 Pfam PF00672 HAMP domain 298 346 5.2E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_03861 787080419f31a31025119d98d0e59c7d 626 Gene3D G3DSA:3.30.450.20 55 269 4.1E-46 T 11-10-2018 VSVS12_03861 787080419f31a31025119d98d0e59c7d 626 Pfam PF02743 Cache domain 73 257 1.0E-20 T 11-10-2018 IPR033479 Double Cache domain 1 VSVS12_01762 3d0a92a397ae774eb2b362aff3fb1e9d 487 Pfam PF00367 phosphotransferase system, EIIB 11 43 1.1E-11 T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VSVS12_01762 3d0a92a397ae774eb2b362aff3fb1e9d 487 Gene3D G3DSA:3.30.1360.60 5 85 4.6E-20 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VSVS12_01762 3d0a92a397ae774eb2b362aff3fb1e9d 487 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VSVS12_01762 3d0a92a397ae774eb2b362aff3fb1e9d 487 Pfam PF02378 Phosphotransferase system, EIIC 133 414 2.8E-33 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VSVS12_01762 3d0a92a397ae774eb2b362aff3fb1e9d 487 SUPERFAMILY SSF55604 8 80 6.54E-18 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VSVS12_02948 e24f3e667638208fba17796dff449c53 309 Hamap MF_00215 Pantothenate kinase [coaA]. 1 309 177.075 T 11-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 VSVS12_02948 e24f3e667638208fba17796dff449c53 309 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 2 309 6.4E-145 T 11-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 VSVS12_02948 e24f3e667638208fba17796dff449c53 309 Gene3D G3DSA:3.40.50.300 1 309 1.2E-91 T 11-10-2018 VSVS12_02948 e24f3e667638208fba17796dff449c53 309 SUPERFAMILY SSF52540 2 309 3.72E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02948 e24f3e667638208fba17796dff449c53 309 PIRSF PIRSF000545 1 309 7.6E-144 T 11-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 VSVS12_02948 e24f3e667638208fba17796dff449c53 309 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 84 236 2.7E-12 T 11-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 VSVS12_01060 6b6e902f145eeea927778bee5ceef16a 676 Pfam PF02151 UvrB/uvrC motif 636 671 1.1E-6 T 11-10-2018 IPR001943 UVR domain GO:0005515 VSVS12_01060 6b6e902f145eeea927778bee5ceef16a 676 Pfam PF12344 Ultra-violet resistance protein B 553 595 1.0E-21 T 11-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain VSVS12_01060 6b6e902f145eeea927778bee5ceef16a 676 SUPERFAMILY SSF52540 37 582 5.54E-35 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01060 6b6e902f145eeea927778bee5ceef16a 676 Gene3D G3DSA:3.40.50.300 268 415 1.6E-50 T 11-10-2018 VSVS12_01060 6b6e902f145eeea927778bee5ceef16a 676 Gene3D G3DSA:3.40.50.300 1 236 5.3E-73 T 11-10-2018 VSVS12_01060 6b6e902f145eeea927778bee5ceef16a 676 Pfam PF00271 Helicase conserved C-terminal domain 440 545 2.2E-17 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_01060 6b6e902f145eeea927778bee5ceef16a 676 Gene3D G3DSA:3.40.50.300 416 597 2.1E-50 T 11-10-2018 VSVS12_01060 6b6e902f145eeea927778bee5ceef16a 676 SUPERFAMILY SSF46600 625 671 4.18E-11 T 11-10-2018 IPR036876 UVR domain superfamily VSVS12_01060 6b6e902f145eeea927778bee5ceef16a 676 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 669 0.0 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 VSVS12_01060 6b6e902f145eeea927778bee5ceef16a 676 Gene3D G3DSA:4.10.860.10 631 676 4.2E-19 T 11-10-2018 VSVS12_01060 6b6e902f145eeea927778bee5ceef16a 676 SMART SM00487 9 427 1.0E-27 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VSVS12_01060 6b6e902f145eeea927778bee5ceef16a 676 Pfam PF04851 Type III restriction enzyme, res subunit 15 138 4.0E-9 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VSVS12_01060 6b6e902f145eeea927778bee5ceef16a 676 SUPERFAMILY SSF52540 4 416 7.02E-138 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01060 6b6e902f145eeea927778bee5ceef16a 676 SMART SM00490 461 547 4.6E-20 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_01060 6b6e902f145eeea927778bee5ceef16a 676 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 671 43.02 T 11-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 VSVS12_00128 662cd8050c2b63d594d36cd7818f326a 201 SUPERFAMILY SSF55718 13 117 4.47E-11 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily VSVS12_00128 662cd8050c2b63d594d36cd7818f326a 201 Gene3D G3DSA:3.30.1050.10 7 117 8.7E-7 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily VSVS12_00128 662cd8050c2b63d594d36cd7818f326a 201 Pfam PF02036 SCP-2 sterol transfer family 15 111 5.0E-24 T 11-10-2018 IPR003033 SCP2 sterol-binding domain VSVS12_01651 a7992d9e33b3d68d4ef036b3e266e588 398 SUPERFAMILY SSF161098 190 379 5.23E-25 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_01651 a7992d9e33b3d68d4ef036b3e266e588 398 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 89 152 5.4E-17 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VSVS12_01651 a7992d9e33b3d68d4ef036b3e266e588 398 SUPERFAMILY SSF161098 88 156 2.35E-12 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_01651 a7992d9e33b3d68d4ef036b3e266e588 398 Gene3D G3DSA:1.10.3720.10 76 183 1.4E-14 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_01651 a7992d9e33b3d68d4ef036b3e266e588 398 Gene3D G3DSA:1.10.3720.10 186 394 4.4E-31 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_01651 a7992d9e33b3d68d4ef036b3e266e588 398 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 393 3.6E-11 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VSVS12_01678 cc618eadfc2355025e3793f947a69e82 547 Gene3D G3DSA:3.30.230.10 291 533 8.0E-90 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VSVS12_01678 cc618eadfc2355025e3793f947a69e82 547 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 457 475 2.3E-9 T 11-10-2018 VSVS12_01678 cc618eadfc2355025e3793f947a69e82 547 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 314 330 2.3E-9 T 11-10-2018 VSVS12_01678 cc618eadfc2355025e3793f947a69e82 547 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 427 446 2.3E-9 T 11-10-2018 VSVS12_01678 cc618eadfc2355025e3793f947a69e82 547 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 397 416 2.3E-9 T 11-10-2018 VSVS12_01678 cc618eadfc2355025e3793f947a69e82 547 SUPERFAMILY SSF54211 314 505 1.67E-32 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VSVS12_01678 cc618eadfc2355025e3793f947a69e82 547 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 400 503 4.2E-10 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 VSVS12_01678 cc618eadfc2355025e3793f947a69e82 547 Pfam PF13654 AAA domain 79 288 4.6E-18 T 11-10-2018 VSVS12_01678 cc618eadfc2355025e3793f947a69e82 547 Gene3D G3DSA:3.40.50.300 32 191 2.5E-9 T 11-10-2018 VSVS12_02685 0d4f0726357ef943389b98d633cf2cdd 418 Pfam PF01966 HD domain 171 290 4.4E-15 T 11-10-2018 IPR006674 HD domain VSVS12_02685 0d4f0726357ef943389b98d633cf2cdd 418 SMART SM00471 165 301 2.0E-8 T 11-10-2018 IPR003607 HD/PDEase domain VSVS12_02685 0d4f0726357ef943389b98d633cf2cdd 418 SUPERFAMILY SSF109604 160 331 6.28E-27 T 11-10-2018 VSVS12_02685 0d4f0726357ef943389b98d633cf2cdd 418 TIGRFAM TIGR00277 HDIG: HDIG domain 167 260 1.0E-8 T 11-10-2018 IPR006675 HDIG domain VSVS12_02685 0d4f0726357ef943389b98d633cf2cdd 418 Gene3D G3DSA:1.10.3210.10 6 331 2.0E-54 T 11-10-2018 VSVS12_02685 0d4f0726357ef943389b98d633cf2cdd 418 Pfam PF11871 Domain of unknown function (DUF3391) 4 138 8.8E-31 T 11-10-2018 IPR021812 Protein of unknown function DUF3391 VSVS12_03554 9be2fc556c96abd11d95f2fab76322ac 246 SMART SM00479 55 236 2.9E-26 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VSVS12_03554 9be2fc556c96abd11d95f2fab76322ac 246 Gene3D G3DSA:3.30.420.10 50 234 1.2E-35 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VSVS12_03554 9be2fc556c96abd11d95f2fab76322ac 246 Pfam PF00929 Exonuclease 57 227 3.8E-21 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VSVS12_03554 9be2fc556c96abd11d95f2fab76322ac 246 SUPERFAMILY SSF53098 48 234 9.99E-39 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_00923 c72667bed0921637827e66bf9f416501 299 Gene3D G3DSA:3.10.580.10 57 203 6.1E-54 T 11-10-2018 VSVS12_00923 c72667bed0921637827e66bf9f416501 299 Pfam PF00571 CBS domain 75 132 4.3E-8 T 11-10-2018 IPR000644 CBS domain VSVS12_00923 c72667bed0921637827e66bf9f416501 299 Pfam PF00571 CBS domain 146 195 1.3E-6 T 11-10-2018 IPR000644 CBS domain VSVS12_00923 c72667bed0921637827e66bf9f416501 299 Pfam PF03471 Transporter associated domain 212 287 5.0E-23 T 11-10-2018 IPR005170 Transporter-associated domain VSVS12_00923 c72667bed0921637827e66bf9f416501 299 SUPERFAMILY SSF56176 210 294 2.54E-24 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VSVS12_00923 c72667bed0921637827e66bf9f416501 299 SMART SM00116 147 195 0.028 T 11-10-2018 IPR000644 CBS domain VSVS12_00923 c72667bed0921637827e66bf9f416501 299 SMART SM00116 84 133 0.0091 T 11-10-2018 IPR000644 CBS domain VSVS12_00923 c72667bed0921637827e66bf9f416501 299 SUPERFAMILY SSF54631 72 208 3.41E-33 T 11-10-2018 VSVS12_00923 c72667bed0921637827e66bf9f416501 299 SMART SM01091 211 289 6.4E-31 T 11-10-2018 IPR005170 Transporter-associated domain VSVS12_00923 c72667bed0921637827e66bf9f416501 299 Gene3D G3DSA:3.30.465.10 204 298 1.0E-32 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 VSVS12_01479 55a6632a4d64abae5a3ba59df40759ad 299 Gene3D G3DSA:2.60.260.20 204 299 3.2E-24 T 11-10-2018 VSVS12_01479 55a6632a4d64abae5a3ba59df40759ad 299 SMART SM00271 4 62 8.6E-30 T 11-10-2018 IPR001623 DnaJ domain VSVS12_01479 55a6632a4d64abae5a3ba59df40759ad 299 SUPERFAMILY SSF49493 127 216 2.49E-17 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 VSVS12_01479 55a6632a4d64abae5a3ba59df40759ad 299 Gene3D G3DSA:1.10.287.110 1 130 4.7E-34 T 11-10-2018 IPR036869 Chaperone J-domain superfamily VSVS12_01479 55a6632a4d64abae5a3ba59df40759ad 299 SUPERFAMILY SSF49493 208 292 6.8E-19 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 VSVS12_01479 55a6632a4d64abae5a3ba59df40759ad 299 Gene3D G3DSA:2.60.260.20 131 200 1.3E-19 T 11-10-2018 VSVS12_01479 55a6632a4d64abae5a3ba59df40759ad 299 SUPERFAMILY SSF46565 1 113 1.96E-35 T 11-10-2018 IPR036869 Chaperone J-domain superfamily VSVS12_01479 55a6632a4d64abae5a3ba59df40759ad 299 PRINTS PR00625 DnaJ domain signature 62 81 5.1E-30 T 11-10-2018 IPR001623 DnaJ domain VSVS12_01479 55a6632a4d64abae5a3ba59df40759ad 299 PRINTS PR00625 DnaJ domain signature 7 25 5.1E-30 T 11-10-2018 IPR001623 DnaJ domain VSVS12_01479 55a6632a4d64abae5a3ba59df40759ad 299 PRINTS PR00625 DnaJ domain signature 25 40 5.1E-30 T 11-10-2018 IPR001623 DnaJ domain VSVS12_01479 55a6632a4d64abae5a3ba59df40759ad 299 PRINTS PR00625 DnaJ domain signature 42 62 5.1E-30 T 11-10-2018 IPR001623 DnaJ domain VSVS12_01479 55a6632a4d64abae5a3ba59df40759ad 299 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 11-10-2018 IPR018253 DnaJ domain, conserved site VSVS12_01479 55a6632a4d64abae5a3ba59df40759ad 299 Pfam PF01556 DnaJ C terminal domain 135 281 7.2E-34 T 11-10-2018 IPR002939 Chaperone DnaJ, C-terminal VSVS12_01479 55a6632a4d64abae5a3ba59df40759ad 299 Pfam PF00226 DnaJ domain 5 67 1.2E-27 T 11-10-2018 IPR001623 DnaJ domain VSVS12_01055 35043ff1e52d066ab08be73a35d787dd 891 SUPERFAMILY SSF46548 336 446 3.01E-21 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VSVS12_01055 35043ff1e52d066ab08be73a35d787dd 891 Pfam PF10531 SLBB domain 296 345 4.9E-7 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VSVS12_01055 35043ff1e52d066ab08be73a35d787dd 891 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 417 428 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VSVS12_01055 35043ff1e52d066ab08be73a35d787dd 891 SUPERFAMILY SSF142019 95 302 1.1E-60 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VSVS12_01055 35043ff1e52d066ab08be73a35d787dd 891 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 140 283 9.1E-48 T 11-10-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VSVS12_01055 35043ff1e52d066ab08be73a35d787dd 891 Hamap MF_00461 Ion-translocating oxidoreductase complex subunit C [rsxC]. 1 800 234.124 T 11-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 VSVS12_01055 35043ff1e52d066ab08be73a35d787dd 891 Gene3D G3DSA:3.40.50.11540 145 292 1.4E-13 T 11-10-2018 IPR037225 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VSVS12_01055 35043ff1e52d066ab08be73a35d787dd 891 Gene3D G3DSA:1.10.1060.10 364 445 4.6E-12 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VSVS12_01055 35043ff1e52d066ab08be73a35d787dd 891 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 448 2.2E-188 T 11-10-2018 IPR010208 Ion-translocating oxidoreductase complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 VSVS12_01055 35043ff1e52d066ab08be73a35d787dd 891 Pfam PF12838 4Fe-4S dicluster domain 377 430 1.1E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VSVS12_01055 35043ff1e52d066ab08be73a35d787dd 891 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 115 1.2E-33 T 11-10-2018 IPR026902 RnfC Barrel sandwich hybrid domain VSVS12_02594 f51deaeee7c43d389261240fcef01aa2 438 SUPERFAMILY SSF56954 1 426 9.16E-86 T 11-10-2018 VSVS12_02594 f51deaeee7c43d389261240fcef01aa2 438 Gene3D G3DSA:1.20.1600.10 23 438 2.2E-116 T 11-10-2018 VSVS12_02594 f51deaeee7c43d389261240fcef01aa2 438 Pfam PF02321 Outer membrane efflux protein 228 420 9.5E-33 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VSVS12_02594 f51deaeee7c43d389261240fcef01aa2 438 Pfam PF02321 Outer membrane efflux protein 27 204 6.7E-28 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VSVS12_02594 f51deaeee7c43d389261240fcef01aa2 438 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 22 434 2.1E-101 T 11-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 VSVS12_00958 f0cd2f8b58cb7210960fa11e7ccb2bfe 915 Gene3D G3DSA:3.40.1110.10 610 729 9.2E-91 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 VSVS12_00958 f0cd2f8b58cb7210960fa11e7ccb2bfe 915 Gene3D G3DSA:2.70.150.20 385 501 3.4E-39 T 11-10-2018 VSVS12_00958 f0cd2f8b58cb7210960fa11e7ccb2bfe 915 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 311 907 1.5E-183 T 11-10-2018 VSVS12_00958 f0cd2f8b58cb7210960fa11e7ccb2bfe 915 SUPERFAMILY SSF56784 598 903 3.21E-55 T 11-10-2018 IPR036412 HAD-like superfamily VSVS12_00958 f0cd2f8b58cb7210960fa11e7ccb2bfe 915 SUPERFAMILY SSF55008 173 244 4.84E-19 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 VSVS12_00958 f0cd2f8b58cb7210960fa11e7ccb2bfe 915 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 744 754 4.6E-26 T 11-10-2018 VSVS12_00958 f0cd2f8b58cb7210960fa11e7ccb2bfe 915 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 722 733 4.6E-26 T 11-10-2018 VSVS12_00958 f0cd2f8b58cb7210960fa11e7ccb2bfe 915 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 797 816 4.6E-26 T 11-10-2018 VSVS12_00958 f0cd2f8b58cb7210960fa11e7ccb2bfe 915 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 820 832 4.6E-26 T 11-10-2018 VSVS12_00958 f0cd2f8b58cb7210960fa11e7ccb2bfe 915 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 447 461 4.6E-26 T 11-10-2018 VSVS12_00958 f0cd2f8b58cb7210960fa11e7ccb2bfe 915 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 599 613 4.6E-26 T 11-10-2018 VSVS12_00958 f0cd2f8b58cb7210960fa11e7ccb2bfe 915 Pfam PF00403 Heavy-metal-associated domain 179 236 2.4E-10 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VSVS12_00958 f0cd2f8b58cb7210960fa11e7ccb2bfe 915 SUPERFAMILY SSF81653 400 497 2.22E-25 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 VSVS12_00958 f0cd2f8b58cb7210960fa11e7ccb2bfe 915 ProSitePatterns PS01047 Heavy-metal-associated domain. 179 208 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 VSVS12_00958 f0cd2f8b58cb7210960fa11e7ccb2bfe 915 Gene3D G3DSA:3.30.70.100 160 249 2.8E-18 T 11-10-2018 VSVS12_00958 f0cd2f8b58cb7210960fa11e7ccb2bfe 915 PRINTS PR00943 Copper-transporting ATPase signature 387 405 5.2E-15 T 11-10-2018 VSVS12_00958 f0cd2f8b58cb7210960fa11e7ccb2bfe 915 PRINTS PR00943 Copper-transporting ATPase signature 520 534 5.2E-15 T 11-10-2018 VSVS12_00958 f0cd2f8b58cb7210960fa11e7ccb2bfe 915 PRINTS PR00943 Copper-transporting ATPase signature 774 791 5.2E-15 T 11-10-2018 VSVS12_00958 f0cd2f8b58cb7210960fa11e7ccb2bfe 915 PRINTS PR00943 Copper-transporting ATPase signature 870 884 5.2E-15 T 11-10-2018 VSVS12_00958 f0cd2f8b58cb7210960fa11e7ccb2bfe 915 PRINTS PR00943 Copper-transporting ATPase signature 315 334 5.2E-15 T 11-10-2018 VSVS12_00958 f0cd2f8b58cb7210960fa11e7ccb2bfe 915 PRINTS PR00943 Copper-transporting ATPase signature 218 238 5.2E-15 T 11-10-2018 VSVS12_00958 f0cd2f8b58cb7210960fa11e7ccb2bfe 915 PRINTS PR00943 Copper-transporting ATPase signature 582 597 5.2E-15 T 11-10-2018 VSVS12_00958 f0cd2f8b58cb7210960fa11e7ccb2bfe 915 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 369 875 1.4E-85 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 VSVS12_00958 f0cd2f8b58cb7210960fa11e7ccb2bfe 915 SUPERFAMILY SSF55008 67 128 4.71E-6 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 VSVS12_00958 f0cd2f8b58cb7210960fa11e7ccb2bfe 915 Gene3D G3DSA:3.40.50.1000 580 849 9.2E-91 T 11-10-2018 IPR023214 HAD superfamily VSVS12_00958 f0cd2f8b58cb7210960fa11e7ccb2bfe 915 SUPERFAMILY SSF81665 346 593 3.01E-8 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 VSVS12_00958 f0cd2f8b58cb7210960fa11e7ccb2bfe 915 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 601 607 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 VSVS12_00958 f0cd2f8b58cb7210960fa11e7ccb2bfe 915 Pfam PF00122 E1-E2 ATPase 398 578 1.6E-49 T 11-10-2018 VSVS12_00958 f0cd2f8b58cb7210960fa11e7ccb2bfe 915 Pfam PF00702 haloacid dehalogenase-like hydrolase 595 811 1.9E-47 T 11-10-2018 VSVS12_00958 f0cd2f8b58cb7210960fa11e7ccb2bfe 915 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 330 906 4.2E-185 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VSVS12_00958 f0cd2f8b58cb7210960fa11e7ccb2bfe 915 Gene3D G3DSA:3.30.70.100 67 125 8.2E-5 T 11-10-2018 VSVS12_00958 f0cd2f8b58cb7210960fa11e7ccb2bfe 915 SUPERFAMILY SSF55008 3 64 5.89E-6 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 VSVS12_00895 0659193bc02b5cc5cea69ded2c67d952 282 SUPERFAMILY SSF56235 2 253 2.39E-51 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VSVS12_00895 0659193bc02b5cc5cea69ded2c67d952 282 Gene3D G3DSA:3.60.20.10 1 258 2.3E-99 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VSVS12_00895 0659193bc02b5cc5cea69ded2c67d952 282 Pfam PF13230 Glutamine amidotransferases class-II 1 255 6.8E-114 T 11-10-2018 IPR026869 Putative glutamine amidotransferase type 2 VSVS12_03971 a562daea3860e76aa9879c0b1826a7d0 654 SUPERFAMILY SSF52540 61 344 2.17E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03971 a562daea3860e76aa9879c0b1826a7d0 654 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 135 144 - T 11-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site VSVS12_03971 a562daea3860e76aa9879c0b1826a7d0 654 Pfam PF16124 RecQ zinc-binding 521 566 3.4E-8 T 11-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain VSVS12_03971 a562daea3860e76aa9879c0b1826a7d0 654 Pfam PF00270 DEAD/DEAH box helicase 24 184 1.6E-16 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VSVS12_03971 a562daea3860e76aa9879c0b1826a7d0 654 Gene3D G3DSA:1.10.10.10 511 652 6.5E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_03971 a562daea3860e76aa9879c0b1826a7d0 654 Pfam PF00271 Helicase conserved C-terminal domain 218 326 2.6E-21 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_03971 a562daea3860e76aa9879c0b1826a7d0 654 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 10 348 2.4E-106 T 11-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 VSVS12_03971 a562daea3860e76aa9879c0b1826a7d0 654 SMART SM00487 16 212 2.3E-28 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VSVS12_03971 a562daea3860e76aa9879c0b1826a7d0 654 Gene3D G3DSA:3.40.50.300 1 202 3.8E-67 T 11-10-2018 VSVS12_03971 a562daea3860e76aa9879c0b1826a7d0 654 SMART SM00490 246 327 3.9E-28 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_03971 a562daea3860e76aa9879c0b1826a7d0 654 Gene3D G3DSA:3.40.50.300 204 447 1.2E-45 T 11-10-2018 VSVS12_00946 216d6f3261df3ecca1f1197ef19f2cd9 116 SMART SM00938 6 104 5.0E-6 T 11-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 VSVS12_00946 216d6f3261df3ecca1f1197ef19f2cd9 116 SUPERFAMILY SSF54913 1 102 4.73E-21 T 11-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta VSVS12_00946 216d6f3261df3ecca1f1197ef19f2cd9 116 Gene3D G3DSA:3.30.70.120 1 111 2.8E-15 T 11-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal VSVS12_02257 68591e1f63c4212c25921b2f48794f8e 698 Gene3D G3DSA:3.40.30.60 364 507 1.4E-52 T 11-10-2018 VSVS12_02257 68591e1f63c4212c25921b2f48794f8e 698 Gene3D G3DSA:1.10.490.80 599 696 2.0E-14 T 11-10-2018 VSVS12_02257 68591e1f63c4212c25921b2f48794f8e 698 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 23 695 8.5E-267 T 11-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 VSVS12_02257 68591e1f63c4212c25921b2f48794f8e 698 Pfam PF00771 FHIPEP family 32 688 2.2E-269 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VSVS12_02257 68591e1f63c4212c25921b2f48794f8e 698 Gene3D G3DSA:1.10.8.540 508 595 6.1E-23 T 11-10-2018 VSVS12_02257 68591e1f63c4212c25921b2f48794f8e 698 PIRSF PIRSF005419 15 698 2.8E-251 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VSVS12_02257 68591e1f63c4212c25921b2f48794f8e 698 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 2.4E-56 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VSVS12_02257 68591e1f63c4212c25921b2f48794f8e 698 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 2.4E-56 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VSVS12_02257 68591e1f63c4212c25921b2f48794f8e 698 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 2.4E-56 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VSVS12_02257 68591e1f63c4212c25921b2f48794f8e 698 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 2.4E-56 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VSVS12_02257 68591e1f63c4212c25921b2f48794f8e 698 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 2.4E-56 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VSVS12_02257 68591e1f63c4212c25921b2f48794f8e 698 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 2.4E-56 T 11-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 VSVS12_02257 68591e1f63c4212c25921b2f48794f8e 698 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 11-10-2018 IPR025505 FHIPEP conserved site VSVS12_00357 aef8b8972a3ccd1430e1706417645d67 144 Gene3D G3DSA:3.40.630.30 19 119 2.6E-12 T 11-10-2018 VSVS12_00357 aef8b8972a3ccd1430e1706417645d67 144 SUPERFAMILY SSF55729 30 116 6.67E-15 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_00357 aef8b8972a3ccd1430e1706417645d67 144 Pfam PF13673 Acetyltransferase (GNAT) domain 31 113 7.5E-11 T 11-10-2018 IPR000182 GNAT domain VSVS12_03213 2d9471b13a4e88adb5ad111f8aabdb91 369 Pfam PF06074 Protein of unknown function (DUF935) 57 325 1.2E-20 T 11-10-2018 IPR009279 Protein of unknown function DUF935 VSVS12_02259 b6462a632da9789dcaa3e9c226369991 924 Pfam PF05193 Peptidase M16 inactive domain 646 823 5.3E-9 T 11-10-2018 IPR007863 Peptidase M16, C-terminal VSVS12_02259 b6462a632da9789dcaa3e9c226369991 924 Pfam PF05193 Peptidase M16 inactive domain 182 355 9.3E-24 T 11-10-2018 IPR007863 Peptidase M16, C-terminal VSVS12_02259 b6462a632da9789dcaa3e9c226369991 924 Pfam PF16187 Middle or third domain of peptidase_M16 366 642 7.7E-80 T 11-10-2018 IPR032632 Peptidase M16, middle/third domain VSVS12_02259 b6462a632da9789dcaa3e9c226369991 924 Gene3D G3DSA:3.30.830.10 1 237 1.5E-86 T 11-10-2018 VSVS12_02259 b6462a632da9789dcaa3e9c226369991 924 SUPERFAMILY SSF63411 469 691 3.83E-59 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VSVS12_02259 b6462a632da9789dcaa3e9c226369991 924 SUPERFAMILY SSF63411 3 224 1.06E-59 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VSVS12_02259 b6462a632da9789dcaa3e9c226369991 924 SUPERFAMILY SSF63411 232 458 5.41E-73 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VSVS12_02259 b6462a632da9789dcaa3e9c226369991 924 Gene3D G3DSA:3.30.830.10 469 851 4.2E-110 T 11-10-2018 VSVS12_02259 b6462a632da9789dcaa3e9c226369991 924 Gene3D G3DSA:3.30.830.10 241 467 4.0E-68 T 11-10-2018 VSVS12_02259 b6462a632da9789dcaa3e9c226369991 924 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 42 65 - T 11-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 VSVS12_02259 b6462a632da9789dcaa3e9c226369991 924 Pfam PF00675 Insulinase (Peptidase family M16) 22 159 2.4E-36 T 11-10-2018 IPR011765 Peptidase M16, N-terminal VSVS12_02259 b6462a632da9789dcaa3e9c226369991 924 Gene3D G3DSA:3.30.830.10 617 876 4.2E-110 T 11-10-2018 VSVS12_02259 b6462a632da9789dcaa3e9c226369991 924 SUPERFAMILY SSF63411 702 915 5.24E-45 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VSVS12_02938 ca495b808301c74e62925beaa34e0d60 164 SUPERFAMILY SSF160369 7 159 3.92E-43 T 11-10-2018 VSVS12_02938 ca495b808301c74e62925beaa34e0d60 164 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 159 23.78 T 11-10-2018 IPR022973 Ribosomal protein L10 VSVS12_02938 ca495b808301c74e62925beaa34e0d60 164 Pfam PF00466 Ribosomal protein L10 7 101 3.0E-25 T 11-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 VSVS12_02938 ca495b808301c74e62925beaa34e0d60 164 Gene3D G3DSA:3.30.70.1730 1 124 3.5E-33 T 11-10-2018 VSVS12_01041 0f4119b57e83de84b94f9ef5bf0f8b2f 467 Pfam PF00589 Phage integrase family 262 443 2.1E-14 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VSVS12_01041 0f4119b57e83de84b94f9ef5bf0f8b2f 467 SUPERFAMILY SSF56349 162 446 1.38E-22 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VSVS12_01041 0f4119b57e83de84b94f9ef5bf0f8b2f 467 Gene3D G3DSA:1.10.443.10 252 465 1.3E-24 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VSVS12_01315 f2d51ffb8b170665f33eeafcb03c385f 323 Gene3D G3DSA:3.40.50.300 1 321 1.1E-97 T 11-10-2018 VSVS12_01315 f2d51ffb8b170665f33eeafcb03c385f 323 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 315 1.0E-23 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VSVS12_01315 f2d51ffb8b170665f33eeafcb03c385f 323 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_01315 f2d51ffb8b170665f33eeafcb03c385f 323 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 296 2.0E-19 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VSVS12_01315 f2d51ffb8b170665f33eeafcb03c385f 323 Pfam PF00005 ABC transporter 24 180 2.7E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_01315 f2d51ffb8b170665f33eeafcb03c385f 323 SMART SM00382 32 238 4.1E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_01315 f2d51ffb8b170665f33eeafcb03c385f 323 SUPERFAMILY SSF52540 31 301 5.21E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02969 5e3648d5e668cac333c46984a5411c33 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 3.6E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_02969 5e3648d5e668cac333c46984a5411c33 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 3.6E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_02969 5e3648d5e668cac333c46984a5411c33 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 3.6E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_02969 5e3648d5e668cac333c46984a5411c33 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 5.0E-20 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_02969 5e3648d5e668cac333c46984a5411c33 211 SMART SM00448 5 119 2.2E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_02969 5e3648d5e668cac333c46984a5411c33 211 Pfam PF00072 Response regulator receiver domain 7 119 6.5E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_02969 5e3648d5e668cac333c46984a5411c33 211 Gene3D G3DSA:3.40.50.2300 3 132 2.8E-27 T 11-10-2018 VSVS12_02969 5e3648d5e668cac333c46984a5411c33 211 SMART SM00421 147 204 8.0E-23 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_02969 5e3648d5e668cac333c46984a5411c33 211 SUPERFAMILY SSF52172 4 172 1.1E-27 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_02969 5e3648d5e668cac333c46984a5411c33 211 Gene3D G3DSA:1.10.10.10 148 211 4.8E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_02969 5e3648d5e668cac333c46984a5411c33 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_01048 6d7b0af4bc72ad3150e72bcca9395ce6 317 SUPERFAMILY SSF103088 182 311 7.32E-26 T 11-10-2018 IPR036737 OmpA-like domain superfamily VSVS12_01048 6d7b0af4bc72ad3150e72bcca9395ce6 317 Pfam PF00691 OmpA family 211 306 3.2E-18 T 11-10-2018 IPR006665 OmpA-like domain VSVS12_01048 6d7b0af4bc72ad3150e72bcca9395ce6 317 ProSitePatterns PS01068 OmpA-like domain. 244 288 - T 11-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 VSVS12_01048 6d7b0af4bc72ad3150e72bcca9395ce6 317 Gene3D G3DSA:2.60.40.2540 46 199 1.7E-56 T 11-10-2018 VSVS12_01048 6d7b0af4bc72ad3150e72bcca9395ce6 317 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 257 274 1.3E-136 T 11-10-2018 VSVS12_01048 6d7b0af4bc72ad3150e72bcca9395ce6 317 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 128 145 1.3E-136 T 11-10-2018 VSVS12_01048 6d7b0af4bc72ad3150e72bcca9395ce6 317 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 69 87 1.3E-136 T 11-10-2018 VSVS12_01048 6d7b0af4bc72ad3150e72bcca9395ce6 317 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 147 169 1.3E-136 T 11-10-2018 VSVS12_01048 6d7b0af4bc72ad3150e72bcca9395ce6 317 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 228 254 1.3E-136 T 11-10-2018 VSVS12_01048 6d7b0af4bc72ad3150e72bcca9395ce6 317 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 198 225 1.3E-136 T 11-10-2018 VSVS12_01048 6d7b0af4bc72ad3150e72bcca9395ce6 317 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 295 315 1.3E-136 T 11-10-2018 VSVS12_01048 6d7b0af4bc72ad3150e72bcca9395ce6 317 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 275 294 1.3E-136 T 11-10-2018 VSVS12_01048 6d7b0af4bc72ad3150e72bcca9395ce6 317 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 109 127 1.3E-136 T 11-10-2018 VSVS12_01048 6d7b0af4bc72ad3150e72bcca9395ce6 317 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 90 108 1.3E-136 T 11-10-2018 VSVS12_01048 6d7b0af4bc72ad3150e72bcca9395ce6 317 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 172 191 1.3E-136 T 11-10-2018 VSVS12_01048 6d7b0af4bc72ad3150e72bcca9395ce6 317 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 52 68 1.3E-136 T 11-10-2018 VSVS12_01048 6d7b0af4bc72ad3150e72bcca9395ce6 317 Gene3D G3DSA:3.30.1330.60 200 317 2.7E-36 T 11-10-2018 IPR036737 OmpA-like domain superfamily VSVS12_00535 61bdbd2713586bc6bcf365828c31cefa 92 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 15 22 - T 11-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VSVS12_00535 61bdbd2713586bc6bcf365828c31cefa 92 SUPERFAMILY SSF55594 5 91 9.03E-25 T 11-10-2018 IPR035895 HPr-like superfamily VSVS12_00535 61bdbd2713586bc6bcf365828c31cefa 92 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 5 85 1.3E-21 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like VSVS12_00535 61bdbd2713586bc6bcf365828c31cefa 92 Pfam PF00381 PTS HPr component phosphorylation site 5 85 1.7E-22 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like VSVS12_00535 61bdbd2713586bc6bcf365828c31cefa 92 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 42 57 - T 11-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site VSVS12_00535 61bdbd2713586bc6bcf365828c31cefa 92 PRINTS PR00107 Phosphocarrier protein signature 41 56 1.7E-13 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like VSVS12_00535 61bdbd2713586bc6bcf365828c31cefa 92 PRINTS PR00107 Phosphocarrier protein signature 15 31 1.7E-13 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like VSVS12_00535 61bdbd2713586bc6bcf365828c31cefa 92 PRINTS PR00107 Phosphocarrier protein signature 56 73 1.7E-13 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like VSVS12_00535 61bdbd2713586bc6bcf365828c31cefa 92 Gene3D G3DSA:3.30.1340.10 3 86 4.5E-26 T 11-10-2018 IPR035895 HPr-like superfamily VSVS12_04258 c417459489257857d6e48bc751bca87b 178 SMART SM01322 1 173 7.5E-98 T 11-10-2018 IPR009822 YaeQ VSVS12_04258 c417459489257857d6e48bc751bca87b 178 Pfam PF07152 YaeQ protein 1 166 1.8E-65 T 11-10-2018 IPR009822 YaeQ VSVS12_04258 c417459489257857d6e48bc751bca87b 178 PIRSF PIRSF011484 1 178 8.4E-63 T 11-10-2018 IPR009822 YaeQ VSVS12_04258 c417459489257857d6e48bc751bca87b 178 Gene3D G3DSA:3.10.640.10 1 176 1.0E-65 T 11-10-2018 IPR038590 YaeQ superfamily VSVS12_04258 c417459489257857d6e48bc751bca87b 178 SUPERFAMILY SSF52980 2 175 1.23E-62 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VSVS12_00407 9ac04c546fb15d50d441f743215de35b 259 Gene3D G3DSA:3.10.560.10 160 232 1.8E-13 T 11-10-2018 VSVS12_00407 9ac04c546fb15d50d441f743215de35b 259 Pfam PF06251 Capsule biosynthesis GfcC 31 255 3.4E-46 T 11-10-2018 IPR010425 Domain of unknown function DUF1017 VSVS12_04334 9d363550ab4adfa09def76bdaa1592c0 143 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 38 126 6.7E-21 T 11-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 VSVS12_04334 9d363550ab4adfa09def76bdaa1592c0 143 SUPERFAMILY SSF51316 16 141 9.52E-31 T 11-10-2018 IPR011057 Mss4-like superfamily VSVS12_04334 9d363550ab4adfa09def76bdaa1592c0 143 Gene3D G3DSA:2.170.150.70 17 132 9.8E-11 T 11-10-2018 VSVS12_00481 f6fde54cf43d694da124a11e0c6392fe 123 SUPERFAMILY SSF50193 2 122 3.27E-51 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 VSVS12_00481 f6fde54cf43d694da124a11e0c6392fe 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 11-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00481 f6fde54cf43d694da124a11e0c6392fe 123 Gene3D G3DSA:2.40.150.20 1 123 3.5E-56 T 11-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 VSVS12_00481 f6fde54cf43d694da124a11e0c6392fe 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 1.8E-54 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VSVS12_00481 f6fde54cf43d694da124a11e0c6392fe 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 27.468 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VSVS12_00481 f6fde54cf43d694da124a11e0c6392fe 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 1.0E-58 T 11-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 VSVS12_00481 f6fde54cf43d694da124a11e0c6392fe 123 SMART SM01374 1 123 2.0E-85 T 11-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 VSVS12_03065 7bde275f3acb14a87a7d43a022019607 374 SUPERFAMILY SSF53187 2 373 1.77E-40 T 11-10-2018 VSVS12_03065 7bde275f3acb14a87a7d43a022019607 374 Gene3D G3DSA:3.30.70.360 177 286 1.2E-103 T 11-10-2018 VSVS12_03065 7bde275f3acb14a87a7d43a022019607 374 SUPERFAMILY SSF55031 177 285 1.96E-24 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VSVS12_03065 7bde275f3acb14a87a7d43a022019607 374 Pfam PF01546 Peptidase family M20/M25/M40 74 370 2.4E-24 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 VSVS12_03065 7bde275f3acb14a87a7d43a022019607 374 Pfam PF07687 Peptidase dimerisation domain 175 275 4.4E-24 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain VSVS12_03065 7bde275f3acb14a87a7d43a022019607 374 PIRSF PIRSF037238 1 373 2.6E-146 T 11-10-2018 IPR017150 Peptidase M20, glutamate carboxypeptidase VSVS12_03065 7bde275f3acb14a87a7d43a022019607 374 Gene3D G3DSA:3.40.630.10 12 361 1.2E-103 T 11-10-2018 VSVS12_00955 f7721d75be5f91a95bb6e370c43a5a81 318 Hamap MF_00323 Ferrochelatase [hemH]. 5 318 35.82 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 VSVS12_00955 f7721d75be5f91a95bb6e370c43a5a81 318 Pfam PF00762 Ferrochelatase 6 317 8.5E-109 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 VSVS12_00955 f7721d75be5f91a95bb6e370c43a5a81 318 SUPERFAMILY SSF53800 4 317 1.31E-100 T 11-10-2018 VSVS12_00955 f7721d75be5f91a95bb6e370c43a5a81 318 TIGRFAM TIGR00109 hemH: ferrochelatase 4 317 1.9E-100 T 11-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 VSVS12_00955 f7721d75be5f91a95bb6e370c43a5a81 318 Gene3D G3DSA:3.40.50.1400 163 301 4.9E-92 T 11-10-2018 VSVS12_00955 f7721d75be5f91a95bb6e370c43a5a81 318 Gene3D G3DSA:3.40.50.1400 8 317 4.9E-92 T 11-10-2018 VSVS12_00955 f7721d75be5f91a95bb6e370c43a5a81 318 ProSitePatterns PS00534 Ferrochelatase signature. 189 207 - T 11-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 VSVS12_00253 7c826a8269c69c20245a20e248c5ee38 169 SUPERFAMILY SSF56420 3 165 4.97E-62 T 11-10-2018 IPR036821 Peptide deformylase superfamily VSVS12_00253 7c826a8269c69c20245a20e248c5ee38 169 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 159 2.3E-61 T 11-10-2018 IPR023635 Peptide deformylase VSVS12_00253 7c826a8269c69c20245a20e248c5ee38 169 Hamap MF_00163 Peptide deformylase [def]. 2 162 30.74 T 11-10-2018 IPR023635 Peptide deformylase VSVS12_00253 7c826a8269c69c20245a20e248c5ee38 169 PRINTS PR01576 Peptide deformylase signature 101 119 4.6E-37 T 11-10-2018 IPR023635 Peptide deformylase VSVS12_00253 7c826a8269c69c20245a20e248c5ee38 169 PRINTS PR01576 Peptide deformylase signature 120 149 4.6E-37 T 11-10-2018 IPR023635 Peptide deformylase VSVS12_00253 7c826a8269c69c20245a20e248c5ee38 169 PRINTS PR01576 Peptide deformylase signature 33 62 4.6E-37 T 11-10-2018 IPR023635 Peptide deformylase VSVS12_00253 7c826a8269c69c20245a20e248c5ee38 169 PRINTS PR01576 Peptide deformylase signature 89 100 4.6E-37 T 11-10-2018 IPR023635 Peptide deformylase VSVS12_00253 7c826a8269c69c20245a20e248c5ee38 169 PIRSF PIRSF004749 1 169 6.5E-55 T 11-10-2018 IPR023635 Peptide deformylase VSVS12_00253 7c826a8269c69c20245a20e248c5ee38 169 Gene3D G3DSA:3.90.45.10 1 169 2.6E-66 T 11-10-2018 IPR036821 Peptide deformylase superfamily VSVS12_00253 7c826a8269c69c20245a20e248c5ee38 169 Pfam PF01327 Polypeptide deformylase 4 152 2.1E-49 T 11-10-2018 IPR023635 Peptide deformylase VSVS12_01195 fb80c1ca6c2f9c7c38813bc1445fae5d 226 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 5.7E-88 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 VSVS12_01195 fb80c1ca6c2f9c7c38813bc1445fae5d 226 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 34.555 T 11-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 VSVS12_01195 fb80c1ca6c2f9c7c38813bc1445fae5d 226 Pfam PF02224 Cytidylate kinase 8 221 4.4E-79 T 11-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 VSVS12_01195 fb80c1ca6c2f9c7c38813bc1445fae5d 226 SUPERFAMILY SSF52540 6 223 4.44E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01195 fb80c1ca6c2f9c7c38813bc1445fae5d 226 Gene3D G3DSA:3.40.50.300 1 226 5.8E-84 T 11-10-2018 VSVS12_00750 9e7099a293327e2f8b95bd113f4d0fe3 172 PRINTS PR00502 NUDIX hydrolase family signature 33 47 1.3E-7 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VSVS12_00750 9e7099a293327e2f8b95bd113f4d0fe3 172 PRINTS PR00502 NUDIX hydrolase family signature 47 62 1.3E-7 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VSVS12_00750 9e7099a293327e2f8b95bd113f4d0fe3 172 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VSVS12_00750 9e7099a293327e2f8b95bd113f4d0fe3 172 Pfam PF00293 NUDIX domain 7 145 8.2E-27 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VSVS12_00750 9e7099a293327e2f8b95bd113f4d0fe3 172 Gene3D G3DSA:3.90.79.10 1 159 6.1E-51 T 11-10-2018 VSVS12_00750 9e7099a293327e2f8b95bd113f4d0fe3 172 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.381 T 11-10-2018 IPR022927 RNA pyrophosphohydrolase RppH VSVS12_00750 9e7099a293327e2f8b95bd113f4d0fe3 172 SUPERFAMILY SSF55811 6 152 3.38E-32 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VSVS12_02637 56ee9b20a6d967e544e4c67ca9e99bd1 541 Gene3D G3DSA:1.10.101.10 462 528 5.1E-19 T 11-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 VSVS12_02637 56ee9b20a6d967e544e4c67ca9e99bd1 541 SMART SM00382 42 195 2.3E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_02637 56ee9b20a6d967e544e4c67ca9e99bd1 541 Gene3D G3DSA:3.90.70.10 346 461 3.5E-34 T 11-10-2018 VSVS12_02637 56ee9b20a6d967e544e4c67ca9e99bd1 541 SUPERFAMILY SSF52540 6 253 8.24E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02637 56ee9b20a6d967e544e4c67ca9e99bd1 541 Pfam PF13401 AAA domain 42 171 1.7E-22 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_02637 56ee9b20a6d967e544e4c67ca9e99bd1 541 Gene3D G3DSA:3.40.50.300 25 184 2.0E-14 T 11-10-2018 VSVS12_02637 56ee9b20a6d967e544e4c67ca9e99bd1 541 Pfam PF01471 Putative peptidoglycan binding domain 472 524 2.3E-9 T 11-10-2018 IPR002477 Peptidoglycan binding-like VSVS12_02637 56ee9b20a6d967e544e4c67ca9e99bd1 541 SUPERFAMILY SSF47090 459 526 7.32E-13 T 11-10-2018 IPR036365 PGBD-like superfamily VSVS12_03127 312856ca2ca3d35dae4ba9095bb44594 381 Gene3D G3DSA:2.40.30.170 49 299 8.9E-109 T 11-10-2018 VSVS12_03127 312856ca2ca3d35dae4ba9095bb44594 381 Gene3D G3DSA:1.10.287.470 96 169 8.9E-109 T 11-10-2018 VSVS12_03127 312856ca2ca3d35dae4ba9095bb44594 381 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 37 370 2.9E-85 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VSVS12_03127 312856ca2ca3d35dae4ba9095bb44594 381 Pfam PF13533 Biotin-lipoyl like 64 110 9.9E-7 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VSVS12_03127 312856ca2ca3d35dae4ba9095bb44594 381 Gene3D G3DSA:2.40.420.20 300 369 8.9E-109 T 11-10-2018 VSVS12_03127 312856ca2ca3d35dae4ba9095bb44594 381 SUPERFAMILY SSF111369 49 295 1.57E-79 T 11-10-2018 VSVS12_03127 312856ca2ca3d35dae4ba9095bb44594 381 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 154 289 7.9E-9 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VSVS12_03127 312856ca2ca3d35dae4ba9095bb44594 381 Pfam PF00529 HlyD membrane-fusion protein of T1SS 299 356 1.6E-6 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VSVS12_03127 312856ca2ca3d35dae4ba9095bb44594 381 Gene3D G3DSA:2.40.50.100 61 205 8.9E-109 T 11-10-2018 VSVS12_01387 24d9c09e316f8aa43cad87be03542941 259 Gene3D G3DSA:2.50.20.10 24 253 2.2E-42 T 11-10-2018 VSVS12_01387 24d9c09e316f8aa43cad87be03542941 259 PIRSF PIRSF028205 1 256 5.4E-97 T 11-10-2018 IPR011220 Uncharacterised conserved protein UCP028205 VSVS12_01387 24d9c09e316f8aa43cad87be03542941 259 Pfam PF17131 Outer membrane lipoprotein-sorting protein 76 253 5.1E-40 T 11-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein VSVS12_02602 095aa03daf8892ead6c066fa57b37498 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 51.688 T 11-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 VSVS12_02602 095aa03daf8892ead6c066fa57b37498 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 3.3E-10 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_02602 095aa03daf8892ead6c066fa57b37498 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 3.3E-10 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_02602 095aa03daf8892ead6c066fa57b37498 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 3.3E-10 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_02602 095aa03daf8892ead6c066fa57b37498 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 3.3E-10 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_02602 095aa03daf8892ead6c066fa57b37498 529 SUPERFAMILY SSF54980 393 468 5.76E-17 T 11-10-2018 IPR035647 EF-G domain III/V-like VSVS12_02602 095aa03daf8892ead6c066fa57b37498 529 SUPERFAMILY SSF50447 262 393 5.16E-26 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VSVS12_02602 095aa03daf8892ead6c066fa57b37498 529 Gene3D G3DSA:3.30.70.3280 390 529 2.7E-51 T 11-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily VSVS12_02602 095aa03daf8892ead6c066fa57b37498 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 6 529 2.6E-297 T 11-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 VSVS12_02602 095aa03daf8892ead6c066fa57b37498 529 Gene3D G3DSA:3.40.50.300 72 379 9.7E-113 T 11-10-2018 VSVS12_02602 095aa03daf8892ead6c066fa57b37498 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 4.5E-46 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_02602 095aa03daf8892ead6c066fa57b37498 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 1.0E-45 T 11-10-2018 IPR032090 Peptide chain release factor 3, C-terminal VSVS12_02602 095aa03daf8892ead6c066fa57b37498 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 154 4.4E-19 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VSVS12_02602 095aa03daf8892ead6c066fa57b37498 529 Gene3D G3DSA:3.40.50.300 110 275 9.7E-113 T 11-10-2018 VSVS12_02602 095aa03daf8892ead6c066fa57b37498 529 SUPERFAMILY SSF52540 10 277 4.91E-85 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02602 095aa03daf8892ead6c066fa57b37498 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site VSVS12_01402 445827f8226c837947eecaf46192bc98 176 Pfam PF00929 Exonuclease 7 171 2.6E-12 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VSVS12_01402 445827f8226c837947eecaf46192bc98 176 SMART SM00479 5 176 6.0E-5 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VSVS12_01402 445827f8226c837947eecaf46192bc98 176 Gene3D G3DSA:3.30.420.10 1 176 4.9E-38 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VSVS12_01402 445827f8226c837947eecaf46192bc98 176 SUPERFAMILY SSF53098 4 175 1.94E-29 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_02545 9c9bd061bded03a84148f8ad36c506be 288 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 181 188 - T 11-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 VSVS12_02545 9c9bd061bded03a84148f8ad36c506be 288 Pfam PF01261 Xylose isomerase-like TIM barrel 26 245 5.0E-41 T 11-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain VSVS12_02545 9c9bd061bded03a84148f8ad36c506be 288 SMART SM00518 9 285 2.7E-122 T 11-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 VSVS12_02545 9c9bd061bded03a84148f8ad36c506be 288 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 8 284 5.8E-108 T 11-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 VSVS12_02545 9c9bd061bded03a84148f8ad36c506be 288 Hamap MF_00152 Probable endonuclease 4 [nfo]. 8 285 42.739 T 11-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 VSVS12_02545 9c9bd061bded03a84148f8ad36c506be 288 Gene3D G3DSA:3.20.20.150 7 287 1.1E-110 T 11-10-2018 VSVS12_02545 9c9bd061bded03a84148f8ad36c506be 288 SUPERFAMILY SSF51658 9 285 1.44E-98 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily VSVS12_02545 9c9bd061bded03a84148f8ad36c506be 288 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 75 83 - T 11-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 VSVS12_02545 9c9bd061bded03a84148f8ad36c506be 288 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 221 237 - T 11-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 VSVS12_01919 7867823388a73fbea1cb54c8e6453dac 562 SUPERFAMILY SSF53223 3 267 4.03E-109 T 11-10-2018 VSVS12_01919 7867823388a73fbea1cb54c8e6453dac 562 PRINTS PR00072 Malic enzyme signature 144 173 3.2E-72 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VSVS12_01919 7867823388a73fbea1cb54c8e6453dac 562 PRINTS PR00072 Malic enzyme signature 180 202 3.2E-72 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VSVS12_01919 7867823388a73fbea1cb54c8e6453dac 562 PRINTS PR00072 Malic enzyme signature 405 421 3.2E-72 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VSVS12_01919 7867823388a73fbea1cb54c8e6453dac 562 PRINTS PR00072 Malic enzyme signature 264 280 3.2E-72 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VSVS12_01919 7867823388a73fbea1cb54c8e6453dac 562 PRINTS PR00072 Malic enzyme signature 84 108 3.2E-72 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VSVS12_01919 7867823388a73fbea1cb54c8e6453dac 562 PRINTS PR00072 Malic enzyme signature 295 311 3.2E-72 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VSVS12_01919 7867823388a73fbea1cb54c8e6453dac 562 PRINTS PR00072 Malic enzyme signature 239 257 3.2E-72 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VSVS12_01919 7867823388a73fbea1cb54c8e6453dac 562 SMART SM01274 78 258 7.1E-107 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VSVS12_01919 7867823388a73fbea1cb54c8e6453dac 562 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 1 562 72.195 T 11-10-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38|MetaCyc: PWY-6339 VSVS12_01919 7867823388a73fbea1cb54c8e6453dac 562 PIRSF PIRSF000106 3 560 7.3E-225 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VSVS12_01919 7867823388a73fbea1cb54c8e6453dac 562 SUPERFAMILY SSF51735 268 559 3.78E-95 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_01919 7867823388a73fbea1cb54c8e6453dac 562 Pfam PF00390 Malic enzyme, N-terminal domain 78 258 3.6E-78 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VSVS12_01919 7867823388a73fbea1cb54c8e6453dac 562 SMART SM00919 268 528 4.9E-133 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 VSVS12_01919 7867823388a73fbea1cb54c8e6453dac 562 Gene3D G3DSA:3.40.50.10380 13 265 6.9E-115 T 11-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 VSVS12_01919 7867823388a73fbea1cb54c8e6453dac 562 Pfam PF03949 Malic enzyme, NAD binding domain 268 528 1.4E-101 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 VSVS12_01919 7867823388a73fbea1cb54c8e6453dac 562 Gene3D G3DSA:3.40.50.720 266 562 4.2E-109 T 11-10-2018 VSVS12_01919 7867823388a73fbea1cb54c8e6453dac 562 ProSitePatterns PS00331 Malic enzymes signature. 264 280 - T 11-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 VSVS12_00217 eaabbfffa410ce6d7349a4d5aba0ae6b 82 Gene3D G3DSA:3.30.110.40 3 80 4.6E-29 T 11-10-2018 IPR036868 TusA-like domain superfamily VSVS12_00217 eaabbfffa410ce6d7349a4d5aba0ae6b 82 Hamap MF_00413 Sulfur carrier protein TusA [tusA]. 3 81 28.279 T 11-10-2018 IPR022931 Sulfur carrier protein TusA GO:0002143|GO:0097163 VSVS12_00217 eaabbfffa410ce6d7349a4d5aba0ae6b 82 SUPERFAMILY SSF64307 7 80 1.44E-25 T 11-10-2018 IPR036868 TusA-like domain superfamily VSVS12_00217 eaabbfffa410ce6d7349a4d5aba0ae6b 82 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 11-10-2018 IPR001455 TusA-like domain VSVS12_00217 eaabbfffa410ce6d7349a4d5aba0ae6b 82 Pfam PF01206 Sulfurtransferase TusA 10 79 1.1E-22 T 11-10-2018 IPR001455 TusA-like domain VSVS12_02283 d7085c616424e8a421410d11f28f91ab 325 Gene3D G3DSA:1.25.40.10 29 143 1.3E-19 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_02283 d7085c616424e8a421410d11f28f91ab 325 SMART SM00671 144 179 0.38 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_02283 d7085c616424e8a421410d11f28f91ab 325 SMART SM00671 68 103 4.6E-5 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_02283 d7085c616424e8a421410d11f28f91ab 325 SMART SM00671 249 284 41.0 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_02283 d7085c616424e8a421410d11f28f91ab 325 SMART SM00671 180 212 2.4 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_02283 d7085c616424e8a421410d11f28f91ab 325 SMART SM00671 213 248 0.043 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_02283 d7085c616424e8a421410d11f28f91ab 325 SMART SM00671 104 139 0.0034 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_02283 d7085c616424e8a421410d11f28f91ab 325 SUPERFAMILY SSF81901 145 315 2.01E-25 T 11-10-2018 VSVS12_02283 d7085c616424e8a421410d11f28f91ab 325 SUPERFAMILY SSF81901 59 137 3.92E-17 T 11-10-2018 VSVS12_02283 d7085c616424e8a421410d11f28f91ab 325 Gene3D G3DSA:1.25.40.10 145 321 4.3E-36 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_02283 d7085c616424e8a421410d11f28f91ab 325 Pfam PF08238 Sel1 repeat 249 283 9.2 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_02283 d7085c616424e8a421410d11f28f91ab 325 Pfam PF08238 Sel1 repeat 69 102 7.3E-6 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_02283 d7085c616424e8a421410d11f28f91ab 325 Pfam PF08238 Sel1 repeat 145 171 0.44 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_02283 d7085c616424e8a421410d11f28f91ab 325 Pfam PF08238 Sel1 repeat 104 135 0.001 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_02283 d7085c616424e8a421410d11f28f91ab 325 Pfam PF08238 Sel1 repeat 180 211 0.01 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_02283 d7085c616424e8a421410d11f28f91ab 325 Pfam PF08238 Sel1 repeat 215 247 3.4E-4 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_04577 55699ff29ecea1d3f3b07df9ccd7a378 586 SUPERFAMILY SSF52794 490 580 2.25E-14 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VSVS12_04577 55699ff29ecea1d3f3b07df9ccd7a378 586 Gene3D G3DSA:3.40.50.2300 489 579 2.7E-18 T 11-10-2018 VSVS12_04577 55699ff29ecea1d3f3b07df9ccd7a378 586 Pfam PF03611 PTS system sugar-specific permease component 15 415 6.0E-123 T 11-10-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 VSVS12_04577 55699ff29ecea1d3f3b07df9ccd7a378 586 PIRSF PIRSF037343 1 582 7.9E-276 T 11-10-2018 IPR017180 Phosphotransferase system component IIBC, sugar-specific, predicted VSVS12_04577 55699ff29ecea1d3f3b07df9ccd7a378 586 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 491 564 9.7E-12 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VSVS12_04416 447ba930cc1d8191de60cdbdd05781c9 330 Pfam PF00482 Type II secretion system (T2SS), protein F 204 318 1.2E-8 T 11-10-2018 IPR018076 Type II secretion system F domain VSVS12_04416 447ba930cc1d8191de60cdbdd05781c9 330 Gene3D G3DSA:1.20.81.30 196 297 2.9E-6 T 11-10-2018 VSVS12_04317 7cb7214c046047ae63120f9af1426a20 334 Gene3D G3DSA:1.20.58.340 272 328 9.3E-16 T 11-10-2018 VSVS12_04317 7cb7214c046047ae63120f9af1426a20 334 SUPERFAMILY SSF143865 17 259 7.72E-20 T 11-10-2018 VSVS12_04317 7cb7214c046047ae63120f9af1426a20 334 Gene3D G3DSA:1.20.58.340 142 268 2.5E-10 T 11-10-2018 VSVS12_04317 7cb7214c046047ae63120f9af1426a20 334 Pfam PF01544 CorA-like Mg2+ transporter protein 21 325 4.3E-39 T 11-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 VSVS12_04317 7cb7214c046047ae63120f9af1426a20 334 Gene3D G3DSA:3.30.460.20 5 118 1.6E-13 T 11-10-2018 VSVS12_04317 7cb7214c046047ae63120f9af1426a20 334 SUPERFAMILY SSF144083 267 325 6.67E-16 T 11-10-2018 VSVS12_00881 634a0725c31c9b69daa730aec7c97e09 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 3.3E-48 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VSVS12_00881 634a0725c31c9b69daa730aec7c97e09 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 3.3E-48 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VSVS12_00881 634a0725c31c9b69daa730aec7c97e09 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 3.3E-48 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VSVS12_00881 634a0725c31c9b69daa730aec7c97e09 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 3.3E-48 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VSVS12_00881 634a0725c31c9b69daa730aec7c97e09 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 3.3E-48 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VSVS12_00881 634a0725c31c9b69daa730aec7c97e09 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 3.3E-48 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VSVS12_00881 634a0725c31c9b69daa730aec7c97e09 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 6 151 2.4E-64 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VSVS12_00881 634a0725c31c9b69daa730aec7c97e09 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 50.259 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VSVS12_00881 634a0725c31c9b69daa730aec7c97e09 319 SUPERFAMILY SSF52096 5 318 1.88E-103 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VSVS12_00881 634a0725c31c9b69daa730aec7c97e09 319 Gene3D G3DSA:3.90.226.10 4 319 2.6E-121 T 11-10-2018 VSVS12_00881 634a0725c31c9b69daa730aec7c97e09 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 2.4E-163 T 11-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VSVS12_02018 226695836ef4944802b3727657519f71 106 SUPERFAMILY SSF102816 3 105 6.02E-48 T 11-10-2018 IPR036763 Putative dsDNA mimic superfamily VSVS12_02018 226695836ef4944802b3727657519f71 106 PIRSF PIRSF004916 1 105 1.1E-50 T 11-10-2018 IPR007376 dsDNA mimic, putative VSVS12_02018 226695836ef4944802b3727657519f71 106 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 8 104 1.0E-45 T 11-10-2018 IPR007376 dsDNA mimic, putative VSVS12_02018 226695836ef4944802b3727657519f71 106 Hamap MF_00680 UPF0263 protein YciU [yciU]. 1 106 35.905 T 11-10-2018 IPR007376 dsDNA mimic, putative VSVS12_02018 226695836ef4944802b3727657519f71 106 Gene3D G3DSA:3.10.450.140 5 105 9.0E-41 T 11-10-2018 IPR036763 Putative dsDNA mimic superfamily VSVS12_02018 226695836ef4944802b3727657519f71 106 Pfam PF04269 Protein of unknown function, DUF440 5 105 1.3E-44 T 11-10-2018 IPR007376 dsDNA mimic, putative VSVS12_01545 dccf4ec859504606ceecd9ce4b39d634 760 Gene3D G3DSA:3.20.20.210 7 524 0.0 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VSVS12_01545 dccf4ec859504606ceecd9ce4b39d634 760 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 758 35.825 T 11-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 VSVS12_01545 dccf4ec859504606ceecd9ce4b39d634 760 Gene3D G3DSA:3.20.20.210 389 756 0.0 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VSVS12_01545 dccf4ec859504606ceecd9ce4b39d634 760 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 757 0.0 T 11-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 VSVS12_01545 dccf4ec859504606ceecd9ce4b39d634 760 PIRSF PIRSF000382 2 760 0.0 T 11-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 VSVS12_01545 dccf4ec859504606ceecd9ce4b39d634 760 SUPERFAMILY SSF51726 5 393 1.57E-106 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VSVS12_01545 dccf4ec859504606ceecd9ce4b39d634 760 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 316 1.2E-118 T 11-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 VSVS12_01545 dccf4ec859504606ceecd9ce4b39d634 760 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 431 753 8.9E-151 T 11-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 VSVS12_01545 dccf4ec859504606ceecd9ce4b39d634 760 SUPERFAMILY SSF51726 396 758 1.7E-113 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VSVS12_03729 0aed62114eb9046f6522859e11e4fee3 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 869 881 7.4E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_03729 0aed62114eb9046f6522859e11e4fee3 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 853 869 7.4E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_03729 0aed62114eb9046f6522859e11e4fee3 902 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 839 853 7.4E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_03729 0aed62114eb9046f6522859e11e4fee3 902 SUPERFAMILY SSF48452 442 805 1.82E-141 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_03729 0aed62114eb9046f6522859e11e4fee3 902 Gene3D G3DSA:1.10.10.10 809 899 9.4E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_03729 0aed62114eb9046f6522859e11e4fee3 902 SMART SM00421 836 893 1.6E-17 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_03729 0aed62114eb9046f6522859e11e4fee3 902 SUPERFAMILY SSF52540 7 250 1.35E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03729 0aed62114eb9046f6522859e11e4fee3 902 SUPERFAMILY SSF46894 831 894 3.74E-16 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VSVS12_03729 0aed62114eb9046f6522859e11e4fee3 902 Pfam PF00196 Bacterial regulatory proteins, luxR family 838 892 5.1E-19 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_03729 0aed62114eb9046f6522859e11e4fee3 902 Gene3D G3DSA:1.25.40.10 445 808 2.5E-73 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_03729 0aed62114eb9046f6522859e11e4fee3 902 Gene3D G3DSA:3.40.50.300 5 167 1.2E-9 T 11-10-2018 VSVS12_03729 0aed62114eb9046f6522859e11e4fee3 902 ProSitePatterns PS00622 LuxR-type HTH domain signature. 853 880 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_01368 e51771fa0312b6dacc1e6fa4f1adf479 59 Pfam PF03966 Trm112p-like protein 2 41 1.4E-11 T 11-10-2018 IPR005651 Trm112-like VSVS12_01368 e51771fa0312b6dacc1e6fa4f1adf479 59 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 27.543 T 11-10-2018 IPR038053 Uncharacterised protein family UPF0434 VSVS12_01368 e51771fa0312b6dacc1e6fa4f1adf479 59 Gene3D G3DSA:2.20.25.10 8 59 4.8E-24 T 11-10-2018 VSVS12_01368 e51771fa0312b6dacc1e6fa4f1adf479 59 SUPERFAMILY SSF158997 1 54 2.62E-20 T 11-10-2018 VSVS12_03865 9dc6749c7163743c47f7e3de47be911d 262 SUPERFAMILY SSF53850 29 254 4.03E-56 T 11-10-2018 VSVS12_03865 9dc6749c7163743c47f7e3de47be911d 262 PIRSF PIRSF004846 1 257 1.1E-65 T 11-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 VSVS12_03865 9dc6749c7163743c47f7e3de47be911d 262 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 36 252 1.6E-58 T 11-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 VSVS12_03865 9dc6749c7163743c47f7e3de47be911d 262 Gene3D G3DSA:3.40.190.10 109 219 5.9E-74 T 11-10-2018 VSVS12_03865 9dc6749c7163743c47f7e3de47be911d 262 Gene3D G3DSA:3.40.190.10 33 253 5.9E-74 T 11-10-2018 VSVS12_03865 9dc6749c7163743c47f7e3de47be911d 262 Pfam PF13531 Bacterial extracellular solute-binding protein 31 254 4.5E-44 T 11-10-2018 VSVS12_00949 d82f631e3a79ab3ceee5b7676d55c629 92 Gene3D G3DSA:3.40.30.10 1 92 3.8E-41 T 11-10-2018 VSVS12_00949 d82f631e3a79ab3ceee5b7676d55c629 92 TIGRFAM TIGR02174 CXXU_selWTH: selT/selW/selH selenoprotein domain 6 77 9.8E-24 T 11-10-2018 IPR011893 Selenoprotein, Rdx-type VSVS12_00949 d82f631e3a79ab3ceee5b7676d55c629 92 SUPERFAMILY SSF52833 5 87 9.17E-30 T 11-10-2018 IPR036249 Thioredoxin-like superfamily VSVS12_00949 d82f631e3a79ab3ceee5b7676d55c629 92 Pfam PF10262 Rdx family 5 78 9.4E-33 T 11-10-2018 IPR011893 Selenoprotein, Rdx-type VSVS12_00722 c10e7280066e64c75646bdec3d964bd2 353 PRINTS PR00183 E.coli/Salmonella-type porin signature 96 118 7.3E-6 T 11-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 VSVS12_00722 c10e7280066e64c75646bdec3d964bd2 353 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 7.3E-6 T 11-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 VSVS12_00722 c10e7280066e64c75646bdec3d964bd2 353 PRINTS PR00183 E.coli/Salmonella-type porin signature 238 255 7.3E-6 T 11-10-2018 IPR001897 Porin, gammaproteobacterial GO:0015288|GO:0016020|GO:0055085 VSVS12_00722 c10e7280066e64c75646bdec3d964bd2 353 Pfam PF13609 Gram-negative porin 9 318 2.7E-22 T 11-10-2018 VSVS12_00722 c10e7280066e64c75646bdec3d964bd2 353 Gene3D G3DSA:2.40.160.10 22 353 7.1E-62 T 11-10-2018 IPR023614 Porin domain superfamily VSVS12_00722 c10e7280066e64c75646bdec3d964bd2 353 SUPERFAMILY SSF56935 22 353 8.9E-52 T 11-10-2018 VSVS12_01008 3a829880df9c27937a750d35b0e5e415 362 Pfam PF03462 PCRF domain 13 205 2.2E-77 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 VSVS12_01008 3a829880df9c27937a750d35b0e5e415 362 Pfam PF00472 RF-1 domain 218 323 1.0E-38 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VSVS12_01008 3a829880df9c27937a750d35b0e5e415 362 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 359 40.824 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 VSVS12_01008 3a829880df9c27937a750d35b0e5e415 362 SUPERFAMILY SSF75620 12 355 9.55E-137 T 11-10-2018 VSVS12_01008 3a829880df9c27937a750d35b0e5e415 362 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 360 1.5E-170 T 11-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 VSVS12_01008 3a829880df9c27937a750d35b0e5e415 362 Gene3D G3DSA:1.20.58.410 3 104 2.1E-9 T 11-10-2018 VSVS12_01008 3a829880df9c27937a750d35b0e5e415 362 SMART SM00937 67 180 4.3E-67 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 VSVS12_01008 3a829880df9c27937a750d35b0e5e415 362 Gene3D G3DSA:3.30.70.1660 115 343 5.3E-95 T 11-10-2018 VSVS12_01008 3a829880df9c27937a750d35b0e5e415 362 Gene3D G3DSA:3.30.160.20 212 293 5.3E-95 T 11-10-2018 VSVS12_01008 3a829880df9c27937a750d35b0e5e415 362 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 230 246 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VSVS12_02929 44029be51d7fde4abe0ced29ddeb12be 380 SUPERFAMILY SSF51261 181 377 1.46E-45 T 11-10-2018 IPR011055 Duplicated hybrid motif VSVS12_02929 44029be51d7fde4abe0ced29ddeb12be 380 Pfam PF01551 Peptidase family M23 280 373 5.8E-24 T 11-10-2018 IPR016047 Peptidase M23 VSVS12_02929 44029be51d7fde4abe0ced29ddeb12be 380 Gene3D G3DSA:1.20.5.340 36 123 2.4E-5 T 11-10-2018 VSVS12_02929 44029be51d7fde4abe0ced29ddeb12be 380 Gene3D G3DSA:2.70.70.10 240 379 2.1E-33 T 11-10-2018 IPR011055 Duplicated hybrid motif VSVS12_00364 94faadf5de7d88761e2f946c4c6f1aa8 335 Gene3D G3DSA:3.30.540.10 7 319 9.9E-124 T 11-10-2018 VSVS12_00364 94faadf5de7d88761e2f946c4c6f1aa8 335 Gene3D G3DSA:3.40.190.90 109 276 9.9E-124 T 11-10-2018 VSVS12_00364 94faadf5de7d88761e2f946c4c6f1aa8 335 PIRSF PIRSF004532 1 331 1.9E-132 T 11-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 VSVS12_00364 94faadf5de7d88761e2f946c4c6f1aa8 335 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 321 2.4E-126 T 11-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 VSVS12_00364 94faadf5de7d88761e2f946c4c6f1aa8 335 SUPERFAMILY SSF56655 1 324 2.56E-105 T 11-10-2018 VSVS12_00364 94faadf5de7d88761e2f946c4c6f1aa8 335 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 329 3.7E-167 T 11-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 VSVS12_01813 b6cc22b2ecbf20b9bd4897a19d7d908e 302 SUPERFAMILY SSF53850 92 301 3.98E-32 T 11-10-2018 VSVS12_01813 b6cc22b2ecbf20b9bd4897a19d7d908e 302 Gene3D G3DSA:3.40.190.10 177 275 3.2E-39 T 11-10-2018 VSVS12_01813 b6cc22b2ecbf20b9bd4897a19d7d908e 302 Pfam PF03466 LysR substrate binding domain 116 300 1.7E-19 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_01813 b6cc22b2ecbf20b9bd4897a19d7d908e 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 3.9E-12 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_01813 b6cc22b2ecbf20b9bd4897a19d7d908e 302 Gene3D G3DSA:3.40.190.10 92 298 3.2E-39 T 11-10-2018 VSVS12_01813 b6cc22b2ecbf20b9bd4897a19d7d908e 302 Gene3D G3DSA:1.10.10.10 3 90 1.8E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_01813 b6cc22b2ecbf20b9bd4897a19d7d908e 302 SUPERFAMILY SSF46785 6 88 3.47E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_01409 7d3744565743ed8ab6c93dd2e89523d8 178 Pfam PF06271 RDD family 3 168 6.0E-22 T 11-10-2018 IPR010432 RDD VSVS12_02623 9a03069f852c694d51ac7c2949fff65c 819 Pfam PF01842 ACT domain 324 374 2.2E-8 T 11-10-2018 IPR002912 ACT domain VSVS12_02623 9a03069f852c694d51ac7c2949fff65c 819 Gene3D G3DSA:3.40.1160.10 3 295 2.7E-87 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VSVS12_02623 9a03069f852c694d51ac7c2949fff65c 819 PIRSF PIRSF000727 1 817 0.0 T 11-10-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+1.1.1.3+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+1.1.1.3+2.7.2.4|KEGG: 00300+1.1.1.3+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VSVS12_02623 9a03069f852c694d51ac7c2949fff65c 819 SUPERFAMILY SSF55347 614 797 2.16E-50 T 11-10-2018 VSVS12_02623 9a03069f852c694d51ac7c2949fff65c 819 SUPERFAMILY SSF53633 1 298 3.03E-78 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VSVS12_02623 9a03069f852c694d51ac7c2949fff65c 819 SUPERFAMILY SSF55021 303 381 4.25E-21 T 11-10-2018 VSVS12_02623 9a03069f852c694d51ac7c2949fff65c 819 Pfam PF00696 Amino acid kinase family 2 284 2.5E-51 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VSVS12_02623 9a03069f852c694d51ac7c2949fff65c 819 Gene3D G3DSA:3.30.2130.10 302 464 7.3E-45 T 11-10-2018 VSVS12_02623 9a03069f852c694d51ac7c2949fff65c 819 Gene3D G3DSA:3.40.50.720 467 811 2.8E-117 T 11-10-2018 VSVS12_02623 9a03069f852c694d51ac7c2949fff65c 819 Pfam PF00742 Homoserine dehydrogenase 614 810 2.6E-46 T 11-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 VSVS12_02623 9a03069f852c694d51ac7c2949fff65c 819 Gene3D G3DSA:3.30.360.10 625 795 2.8E-117 T 11-10-2018 VSVS12_02623 9a03069f852c694d51ac7c2949fff65c 819 SUPERFAMILY SSF51735 463 636 3.48E-37 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_02623 9a03069f852c694d51ac7c2949fff65c 819 Gene3D G3DSA:1.20.120.1320 41 142 2.7E-87 T 11-10-2018 VSVS12_02623 9a03069f852c694d51ac7c2949fff65c 819 SUPERFAMILY SSF55021 383 476 1.83E-22 T 11-10-2018 VSVS12_02623 9a03069f852c694d51ac7c2949fff65c 819 Pfam PF13840 ACT domain 394 456 1.2E-7 T 11-10-2018 IPR027795 CASTOR, ACT domain VSVS12_02623 9a03069f852c694d51ac7c2949fff65c 819 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 11-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VSVS12_02623 9a03069f852c694d51ac7c2949fff65c 819 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 606 1.1E-25 T 11-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 VSVS12_02623 9a03069f852c694d51ac7c2949fff65c 819 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 4.3E-132 T 11-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VSVS12_02623 9a03069f852c694d51ac7c2949fff65c 819 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 11-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 VSVS12_01823 d596b41d07ffb82f8f815f37fb2e681c 92 Gene3D G3DSA:3.10.20.30 2 81 4.6E-18 T 11-10-2018 IPR012675 Beta-grasp domain superfamily VSVS12_01823 d596b41d07ffb82f8f815f37fb2e681c 92 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 35 43 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VSVS12_01823 d596b41d07ffb82f8f815f37fb2e681c 92 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 6 75 3.9E-11 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VSVS12_01823 d596b41d07ffb82f8f815f37fb2e681c 92 SUPERFAMILY SSF54292 3 81 9.31E-21 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VSVS12_02779 86974ac005cf0b08629a41d1167db82a 257 SUPERFAMILY SSF64167 11 255 1.03E-85 T 11-10-2018 VSVS12_02779 86974ac005cf0b08629a41d1167db82a 257 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 11 257 40.716 T 11-10-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 VSVS12_02779 86974ac005cf0b08629a41d1167db82a 257 Gene3D G3DSA:3.40.1210.10 2 257 5.5E-96 T 11-10-2018 IPR036523 SurE-like phosphatase/nucleotidase superfamily GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 VSVS12_02779 86974ac005cf0b08629a41d1167db82a 257 Pfam PF01975 Survival protein SurE 13 191 1.2E-60 T 11-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 VSVS12_02779 86974ac005cf0b08629a41d1167db82a 257 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 12 242 5.4E-72 T 11-10-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 VSVS12_00373 9711baba1399dbb800e0580c947ebd0d 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 11-10-2018 VSVS12_00373 9711baba1399dbb800e0580c947ebd0d 335 Gene3D G3DSA:3.40.50.2300 56 306 3.8E-81 T 11-10-2018 VSVS12_00373 9711baba1399dbb800e0580c947ebd0d 335 Gene3D G3DSA:3.40.50.2300 160 289 3.8E-81 T 11-10-2018 VSVS12_00373 9711baba1399dbb800e0580c947ebd0d 335 SUPERFAMILY SSF47413 1 59 2.72E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VSVS12_00373 9711baba1399dbb800e0580c947ebd0d 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.8E-20 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VSVS12_00373 9711baba1399dbb800e0580c947ebd0d 335 Gene3D G3DSA:1.10.260.40 1 55 3.3E-26 T 11-10-2018 VSVS12_00373 9711baba1399dbb800e0580c947ebd0d 335 SUPERFAMILY SSF53822 60 332 8.17E-89 T 11-10-2018 IPR028082 Periplasmic binding protein-like I VSVS12_00373 9711baba1399dbb800e0580c947ebd0d 335 Pfam PF13377 Periplasmic binding protein-like domain 168 328 2.3E-42 T 11-10-2018 VSVS12_00373 9711baba1399dbb800e0580c947ebd0d 335 SMART SM00354 1 71 8.3E-33 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VSVS12_04542 5ed02f3beb10d72e7b72aaf895b3409e 295 Pfam PF01212 Beta-eliminating lyase 96 289 5.2E-28 T 11-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 VSVS12_04542 5ed02f3beb10d72e7b72aaf895b3409e 295 Gene3D G3DSA:3.40.640.10 70 289 2.1E-82 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VSVS12_04542 5ed02f3beb10d72e7b72aaf895b3409e 295 Gene3D G3DSA:3.90.1150.10 27 69 2.1E-82 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VSVS12_04542 5ed02f3beb10d72e7b72aaf895b3409e 295 SUPERFAMILY SSF53383 24 284 1.99E-32 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VSVS12_01898 24b08525ed2a15009648c370b9cbe423 567 SUPERFAMILY SSF55874 260 430 3.14E-47 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_01898 24b08525ed2a15009648c370b9cbe423 567 Gene3D G3DSA:3.40.50.2300 446 567 7.4E-37 T 11-10-2018 VSVS12_01898 24b08525ed2a15009648c370b9cbe423 567 SMART SM00448 452 563 9.5E-33 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_01898 24b08525ed2a15009648c370b9cbe423 567 Pfam PF00512 His Kinase A (phospho-acceptor) domain 208 271 4.4E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_01898 24b08525ed2a15009648c370b9cbe423 567 Gene3D G3DSA:1.10.287.130 183 269 7.1E-22 T 11-10-2018 VSVS12_01898 24b08525ed2a15009648c370b9cbe423 567 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 320 428 9.3E-30 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_01898 24b08525ed2a15009648c370b9cbe423 567 SMART SM00387 318 429 5.7E-37 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_01898 24b08525ed2a15009648c370b9cbe423 567 SUPERFAMILY SSF52172 451 567 8.54E-35 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_01898 24b08525ed2a15009648c370b9cbe423 567 PRINTS PR00344 Bacterial sensor protein C-terminal signature 372 382 9.9E-19 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_01898 24b08525ed2a15009648c370b9cbe423 567 PRINTS PR00344 Bacterial sensor protein C-terminal signature 389 407 9.9E-19 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_01898 24b08525ed2a15009648c370b9cbe423 567 PRINTS PR00344 Bacterial sensor protein C-terminal signature 354 368 9.9E-19 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_01898 24b08525ed2a15009648c370b9cbe423 567 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 426 9.9E-19 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_01898 24b08525ed2a15009648c370b9cbe423 567 SUPERFAMILY SSF47384 190 271 2.35E-19 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VSVS12_01898 24b08525ed2a15009648c370b9cbe423 567 SMART SM00388 206 271 1.3E-19 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_01898 24b08525ed2a15009648c370b9cbe423 567 Gene3D G3DSA:3.30.565.10 270 435 5.2E-47 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_01898 24b08525ed2a15009648c370b9cbe423 567 Pfam PF00072 Response regulator receiver domain 454 563 4.2E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_00828 0c66dc62c30e6d432d46e49ea3cd250d 446 TIGRFAM TIGR01936 nqrA: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit 2 446 6.0E-202 T 11-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 VSVS12_00828 0c66dc62c30e6d432d46e49ea3cd250d 446 Hamap MF_00425 Na(+)-translocating NADH-quinone reductase subunit A [nqrA]. 1 446 46.212 T 11-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 VSVS12_00828 0c66dc62c30e6d432d46e49ea3cd250d 446 Pfam PF11973 NQRA C-terminal domain 261 309 5.4E-21 T 11-10-2018 IPR022615 Na(+)-translocating NADH-quinone reductase subunit A, C-terminal domain GO:0016655|GO:0055114 VSVS12_00828 0c66dc62c30e6d432d46e49ea3cd250d 446 Pfam PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) 1 256 1.4E-113 T 11-10-2018 IPR008703 Na(+)-translocating NADH-quinone reductase subunit A GO:0006814|GO:0016655|GO:0055114 VSVS12_01852 2431b297594ad9f183f79b21788ff97e 219 Pfam PF00072 Response regulator receiver domain 3 113 4.8E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_01852 2431b297594ad9f183f79b21788ff97e 219 SUPERFAMILY SSF46894 119 218 9.35E-26 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VSVS12_01852 2431b297594ad9f183f79b21788ff97e 219 SMART SM00862 145 216 1.2E-21 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VSVS12_01852 2431b297594ad9f183f79b21788ff97e 219 Gene3D G3DSA:1.10.10.10 123 219 2.0E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_01852 2431b297594ad9f183f79b21788ff97e 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 216 1.9E-21 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VSVS12_01852 2431b297594ad9f183f79b21788ff97e 219 Gene3D G3DSA:3.40.50.2300 1 122 2.7E-36 T 11-10-2018 VSVS12_01852 2431b297594ad9f183f79b21788ff97e 219 SMART SM00448 1 112 1.6E-35 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_01852 2431b297594ad9f183f79b21788ff97e 219 SUPERFAMILY SSF52172 1 133 5.41E-37 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_03407 ec6a20884c5b368c21121df57f5bd463 197 Pfam PF01810 LysE type translocator 15 189 7.6E-12 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VSVS12_00666 0e42731599a53bdee0a15594b4683580 254 SUPERFAMILY SSF48008 98 235 3.14E-19 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VSVS12_00666 0e42731599a53bdee0a15594b4683580 254 Gene3D G3DSA:1.10.10.10 1 74 2.5E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_00666 0e42731599a53bdee0a15594b4683580 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 2.0E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VSVS12_00666 0e42731599a53bdee0a15594b4683580 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 2.0E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VSVS12_00666 0e42731599a53bdee0a15594b4683580 254 SMART SM00895 99 227 2.8E-17 T 11-10-2018 IPR011711 GntR, C-terminal VSVS12_00666 0e42731599a53bdee0a15594b4683580 254 Pfam PF07729 FCD domain 99 226 2.4E-17 T 11-10-2018 IPR011711 GntR, C-terminal VSVS12_00666 0e42731599a53bdee0a15594b4683580 254 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 3.8E-25 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VSVS12_00666 0e42731599a53bdee0a15594b4683580 254 Gene3D G3DSA:1.20.120.530 97 236 7.8E-26 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VSVS12_00666 0e42731599a53bdee0a15594b4683580 254 SUPERFAMILY SSF46785 5 77 4.18E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_00666 0e42731599a53bdee0a15594b4683580 254 SMART SM00345 15 74 1.8E-27 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VSVS12_02850 16b18a71adc3703939c0b6ce5e368840 243 PIRSF PIRSF015601 2 242 1.1E-55 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 VSVS12_02850 16b18a71adc3703939c0b6ce5e368840 243 Pfam PF04452 RNA methyltransferase 18 236 9.5E-75 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 VSVS12_02850 16b18a71adc3703939c0b6ce5e368840 243 Gene3D G3DSA:2.40.240.20 1 70 2.5E-21 T 11-10-2018 VSVS12_02850 16b18a71adc3703939c0b6ce5e368840 243 Gene3D G3DSA:3.40.1280.10 74 243 9.5E-67 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VSVS12_02850 16b18a71adc3703939c0b6ce5e368840 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 242 4.0E-86 T 11-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 VSVS12_02850 16b18a71adc3703939c0b6ce5e368840 243 SUPERFAMILY SSF88697 2 70 4.97E-16 T 11-10-2018 IPR015947 PUA-like superfamily VSVS12_02850 16b18a71adc3703939c0b6ce5e368840 243 SUPERFAMILY SSF75217 75 242 4.8E-53 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases VSVS12_01653 63250f6007a1b9653f0592dd5e027f38 311 SUPERFAMILY SSF53790 223 288 5.09E-5 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 VSVS12_01653 63250f6007a1b9653f0592dd5e027f38 311 SUPERFAMILY SSF51735 1 113 5.63E-23 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_01653 63250f6007a1b9653f0592dd5e027f38 311 Pfam PF13241 Putative NAD(P)-binding 6 116 4.4E-27 T 11-10-2018 VSVS12_01653 63250f6007a1b9653f0592dd5e027f38 311 SUPERFAMILY SSF75615 115 200 1.83E-24 T 11-10-2018 VSVS12_01653 63250f6007a1b9653f0592dd5e027f38 311 Gene3D G3DSA:3.40.50.720 1 113 3.2E-32 T 11-10-2018 VSVS12_01653 63250f6007a1b9653f0592dd5e027f38 311 Gene3D G3DSA:1.10.8.210 150 211 1.3E-8 T 11-10-2018 IPR037115 Sirohaem synthase, dimerisation domain superfamily GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VSVS12_01653 63250f6007a1b9653f0592dd5e027f38 311 Pfam PF10414 Sirohaem synthase dimerisation region 156 192 1.7E-11 T 11-10-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VSVS12_01653 63250f6007a1b9653f0592dd5e027f38 311 Gene3D G3DSA:3.30.160.110 114 149 1.3E-14 T 11-10-2018 VSVS12_01653 63250f6007a1b9653f0592dd5e027f38 311 Pfam PF14824 Sirohaem biosynthesis protein central 120 147 8.1E-9 T 11-10-2018 IPR028281 Siroheme synthase, central domain KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VSVS12_01653 63250f6007a1b9653f0592dd5e027f38 311 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 193 2.5E-58 T 11-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VSVS12_02581 49952b0a515dd2fa86754c78db968241 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 33.87 T 11-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid VSVS12_02581 49952b0a515dd2fa86754c78db968241 130 SUPERFAMILY SSF54211 5 130 3.75E-48 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VSVS12_02581 49952b0a515dd2fa86754c78db968241 130 Gene3D G3DSA:3.30.230.10 1 130 4.9E-54 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VSVS12_02581 49952b0a515dd2fa86754c78db968241 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 1.7E-46 T 11-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 VSVS12_02581 49952b0a515dd2fa86754c78db968241 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 11-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 VSVS12_02962 b270d37cc7f5a536917cc89f25a63154 228 Gene3D G3DSA:3.40.50.2300 1 127 1.1E-37 T 11-10-2018 VSVS12_02962 b270d37cc7f5a536917cc89f25a63154 228 SMART SM00448 2 111 1.8E-44 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_02962 b270d37cc7f5a536917cc89f25a63154 228 SUPERFAMILY SSF46894 125 225 1.02E-22 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VSVS12_02962 b270d37cc7f5a536917cc89f25a63154 228 SUPERFAMILY SSF52172 1 122 3.84E-39 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_02962 b270d37cc7f5a536917cc89f25a63154 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 224 4.4E-19 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VSVS12_02962 b270d37cc7f5a536917cc89f25a63154 228 SMART SM00862 148 224 9.9E-21 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VSVS12_02962 b270d37cc7f5a536917cc89f25a63154 228 Gene3D G3DSA:1.10.10.10 128 228 5.5E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_02962 b270d37cc7f5a536917cc89f25a63154 228 Pfam PF00072 Response regulator receiver domain 4 112 1.0E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_02222 779fe251f49c05a259b8db330569d942 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 100 1.4E-33 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family VSVS12_02222 779fe251f49c05a259b8db330569d942 109 Gene3D G3DSA:3.30.1310.10 1 109 5.8E-46 T 11-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily VSVS12_02222 779fe251f49c05a259b8db330569d942 109 SUPERFAMILY SSF82607 11 103 9.02E-35 T 11-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily VSVS12_02222 779fe251f49c05a259b8db330569d942 109 PIRSF PIRSF004555 3 109 1.7E-39 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family VSVS12_02222 779fe251f49c05a259b8db330569d942 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 22.736 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family VSVS12_02222 779fe251f49c05a259b8db330569d942 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 105 1.1E-38 T 11-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family VSVS12_02139 3f769b4db664a18dbfab683b03167cae 257 Pfam PF16331 TolA binding protein trimerisation 44 115 1.1E-23 T 11-10-2018 IPR032519 YbgF, trimerisation domain GO:0070206 VSVS12_02139 3f769b4db664a18dbfab683b03167cae 257 Gene3D G3DSA:1.20.5.110 42 118 1.6E-22 T 11-10-2018 VSVS12_02139 3f769b4db664a18dbfab683b03167cae 257 Pfam PF13432 Tetratricopeptide repeat 151 203 7.0E-7 T 11-10-2018 VSVS12_02139 3f769b4db664a18dbfab683b03167cae 257 SMART SM00028 213 246 0.032 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_02139 3f769b4db664a18dbfab683b03167cae 257 SMART SM00028 177 210 16.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_02139 3f769b4db664a18dbfab683b03167cae 257 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 140 256 1.3E-37 T 11-10-2018 IPR014162 Cell division coordinator CpoB, C-terminal VSVS12_02139 3f769b4db664a18dbfab683b03167cae 257 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 5 257 16.977 T 11-10-2018 IPR034706 Cell division coordinator CpoB GO:0051301 VSVS12_02139 3f769b4db664a18dbfab683b03167cae 257 Pfam PF13174 Tetratricopeptide repeat 214 246 4.1E-7 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_02139 3f769b4db664a18dbfab683b03167cae 257 SUPERFAMILY SSF48452 139 251 2.53E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_02139 3f769b4db664a18dbfab683b03167cae 257 Gene3D G3DSA:1.25.40.10 139 257 4.9E-25 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_00853 f419fa67a199ac7475d5bf50d7b468a7 368 Pfam PF01872 RibD C-terminal domain 152 357 1.1E-46 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 VSVS12_00853 f419fa67a199ac7475d5bf50d7b468a7 368 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 12 358 2.4E-124 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 VSVS12_00853 f419fa67a199ac7475d5bf50d7b468a7 368 PIRSF PIRSF006769 4 364 2.0E-118 T 11-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 VSVS12_00853 f419fa67a199ac7475d5bf50d7b468a7 368 SUPERFAMILY SSF53597 149 360 7.07E-54 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 VSVS12_00853 f419fa67a199ac7475d5bf50d7b468a7 368 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 151 362 1.1E-54 T 11-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 VSVS12_00853 f419fa67a199ac7475d5bf50d7b468a7 368 SUPERFAMILY SSF53927 8 150 1.56E-45 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VSVS12_00853 f419fa67a199ac7475d5bf50d7b468a7 368 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 55 93 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VSVS12_00853 f419fa67a199ac7475d5bf50d7b468a7 368 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 10 104 1.3E-17 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain VSVS12_00853 f419fa67a199ac7475d5bf50d7b468a7 368 Gene3D G3DSA:3.40.430.10 142 365 4.5E-64 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 VSVS12_00853 f419fa67a199ac7475d5bf50d7b468a7 368 Gene3D G3DSA:3.40.140.10 4 140 3.5E-43 T 11-10-2018 VSVS12_00359 987ac0c668337a3926d09fcb6251c473 323 Gene3D G3DSA:2.30.30.100 274 316 4.7E-17 T 11-10-2018 VSVS12_00359 987ac0c668337a3926d09fcb6251c473 323 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 81 320 4.3E-68 T 11-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VSVS12_00359 987ac0c668337a3926d09fcb6251c473 323 SUPERFAMILY SSF55681 68 271 5.54E-61 T 11-10-2018 VSVS12_00359 987ac0c668337a3926d09fcb6251c473 323 Gene3D G3DSA:1.10.10.10 1 64 5.5E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_00359 987ac0c668337a3926d09fcb6251c473 323 SUPERFAMILY SSF50037 274 320 6.87E-10 T 11-10-2018 IPR008988 Transcriptional repressor, C-terminal VSVS12_00359 987ac0c668337a3926d09fcb6251c473 323 SUPERFAMILY SSF46785 3 61 1.06E-11 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_00359 987ac0c668337a3926d09fcb6251c473 323 Pfam PF08279 HTH domain 8 59 1.7E-12 T 11-10-2018 IPR013196 Helix-turn-helix, type 11 VSVS12_00359 987ac0c668337a3926d09fcb6251c473 323 Pfam PF03099 Biotin/lipoate A/B protein ligase family 83 207 1.2E-21 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 VSVS12_00359 987ac0c668337a3926d09fcb6251c473 323 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 7 320 32.976 T 11-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 VSVS12_00359 987ac0c668337a3926d09fcb6251c473 323 Pfam PF02237 Biotin protein ligase C terminal domain 275 320 6.6E-9 T 11-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VSVS12_00359 987ac0c668337a3926d09fcb6251c473 323 Gene3D G3DSA:3.30.930.10 66 273 4.6E-67 T 11-10-2018 VSVS12_00541 d54c8303145d51278b93155a2f35bd69 165 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 1 161 24.493 T 11-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 VSVS12_00541 d54c8303145d51278b93155a2f35bd69 165 Gene3D G3DSA:2.60.450.10 20 158 4.1E-39 T 11-10-2018 VSVS12_00541 d54c8303145d51278b93155a2f35bd69 165 Pfam PF03968 OstA-like protein 30 141 4.2E-29 T 11-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal VSVS12_00541 d54c8303145d51278b93155a2f35bd69 165 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 20 161 1.5E-46 T 11-10-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 VSVS12_01775 350bc33c14b88581ab943e190bf9c10b 343 Gene3D G3DSA:3.40.50.2000 134 316 3.2E-18 T 11-10-2018 VSVS12_01775 350bc33c14b88581ab943e190bf9c10b 343 SUPERFAMILY SSF53756 15 326 1.3E-24 T 11-10-2018 VSVS12_01775 350bc33c14b88581ab943e190bf9c10b 343 Pfam PF00534 Glycosyl transferases group 1 169 310 1.8E-11 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 VSVS12_01775 350bc33c14b88581ab943e190bf9c10b 343 Gene3D G3DSA:3.40.50.2000 41 325 3.2E-18 T 11-10-2018 VSVS12_00420 44e847c4191af6185f6624940a50c421 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 125 143 1.9E-39 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VSVS12_00420 44e847c4191af6185f6624940a50c421 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 15 32 1.9E-39 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VSVS12_00420 44e847c4191af6185f6624940a50c421 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 75 95 1.9E-39 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VSVS12_00420 44e847c4191af6185f6624940a50c421 156 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 99 121 1.9E-39 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VSVS12_00420 44e847c4191af6185f6624940a50c421 156 Gene3D G3DSA:3.10.420.10 3 155 2.4E-57 T 11-10-2018 IPR035958 SecB-like superfamily VSVS12_00420 44e847c4191af6185f6624940a50c421 156 Hamap MF_00821 Protein-export protein SecB [secB]. 1 147 31.705 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VSVS12_00420 44e847c4191af6185f6624940a50c421 156 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 11 146 1.6E-57 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VSVS12_00420 44e847c4191af6185f6624940a50c421 156 Pfam PF02556 Preprotein translocase subunit SecB 8 146 1.5E-54 T 11-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 VSVS12_00420 44e847c4191af6185f6624940a50c421 156 SUPERFAMILY SSF54611 12 144 1.55E-50 T 11-10-2018 IPR035958 SecB-like superfamily VSVS12_03688 24b4938452776dd8697d82960c1eec16 786 PIRSF PIRSF037119 1 786 7.7E-298 T 11-10-2018 IPR017116 Signal transduction histidine kinase, PgtB VSVS12_03688 24b4938452776dd8697d82960c1eec16 786 SUPERFAMILY SSF55874 634 782 2.36E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_03688 24b4938452776dd8697d82960c1eec16 786 Gene3D G3DSA:3.30.450.20 390 514 4.7E-5 T 11-10-2018 VSVS12_03688 24b4938452776dd8697d82960c1eec16 786 SUPERFAMILY SSF47384 559 631 3.14E-9 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VSVS12_03688 24b4938452776dd8697d82960c1eec16 786 PRINTS PR00344 Bacterial sensor protein C-terminal signature 716 730 7.5E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_03688 24b4938452776dd8697d82960c1eec16 786 PRINTS PR00344 Bacterial sensor protein C-terminal signature 734 744 7.5E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_03688 24b4938452776dd8697d82960c1eec16 786 PRINTS PR00344 Bacterial sensor protein C-terminal signature 745 763 7.5E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_03688 24b4938452776dd8697d82960c1eec16 786 PRINTS PR00344 Bacterial sensor protein C-terminal signature 769 782 7.5E-10 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_03688 24b4938452776dd8697d82960c1eec16 786 Gene3D G3DSA:1.10.287.130 539 626 1.7E-17 T 11-10-2018 VSVS12_03688 24b4938452776dd8697d82960c1eec16 786 SMART SM00388 563 631 3.5E-4 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_03688 24b4938452776dd8697d82960c1eec16 786 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 677 784 3.0E-12 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_03688 24b4938452776dd8697d82960c1eec16 786 SMART SM00304 344 396 7.5E-5 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_03688 24b4938452776dd8697d82960c1eec16 786 Gene3D G3DSA:3.30.565.10 631 786 5.9E-30 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_03688 24b4938452776dd8697d82960c1eec16 786 SMART SM00387 674 785 4.2E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_03812 f769bda20cee3a6ac6eea66866969290 398 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 8 374 8.6E-115 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VSVS12_03812 f769bda20cee3a6ac6eea66866969290 398 Pfam PF03222 Tryptophan/tyrosine permease family 4 383 6.4E-113 T 11-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 VSVS12_03812 f769bda20cee3a6ac6eea66866969290 398 PRINTS PR00166 Aromatic amino acid permease signature 332 351 3.0E-66 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VSVS12_03812 f769bda20cee3a6ac6eea66866969290 398 PRINTS PR00166 Aromatic amino acid permease signature 149 169 3.0E-66 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VSVS12_03812 f769bda20cee3a6ac6eea66866969290 398 PRINTS PR00166 Aromatic amino acid permease signature 183 205 3.0E-66 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VSVS12_03812 f769bda20cee3a6ac6eea66866969290 398 PRINTS PR00166 Aromatic amino acid permease signature 11 34 3.0E-66 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VSVS12_03812 f769bda20cee3a6ac6eea66866969290 398 PRINTS PR00166 Aromatic amino acid permease signature 83 103 3.0E-66 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VSVS12_03812 f769bda20cee3a6ac6eea66866969290 398 PRINTS PR00166 Aromatic amino acid permease signature 311 329 3.0E-66 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VSVS12_03812 f769bda20cee3a6ac6eea66866969290 398 PRINTS PR00166 Aromatic amino acid permease signature 38 57 3.0E-66 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VSVS12_03812 f769bda20cee3a6ac6eea66866969290 398 PRINTS PR00166 Aromatic amino acid permease signature 222 241 3.0E-66 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VSVS12_03812 f769bda20cee3a6ac6eea66866969290 398 Gene3D G3DSA:1.20.1740.10 3 397 5.3E-13 T 11-10-2018 VSVS12_03812 f769bda20cee3a6ac6eea66866969290 398 PIRSF PIRSF006060 2 292 5.0E-13 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VSVS12_03812 f769bda20cee3a6ac6eea66866969290 398 PIRSF PIRSF006060 297 397 20.0 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VSVS12_03812 f769bda20cee3a6ac6eea66866969290 398 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 18 34 - T 11-10-2018 IPR013061 Tryptophan/tryrosine permease, conserved site VSVS12_02308 6513f974b4c6741c5b51cf83ce4255c6 488 Pfam PF00158 Sigma-54 interaction domain 137 304 6.8E-72 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VSVS12_02308 6513f974b4c6741c5b51cf83ce4255c6 488 Gene3D G3DSA:3.40.50.300 124 308 9.6E-65 T 11-10-2018 VSVS12_02308 6513f974b4c6741c5b51cf83ce4255c6 488 Gene3D G3DSA:1.10.8.60 309 385 7.6E-26 T 11-10-2018 VSVS12_02308 6513f974b4c6741c5b51cf83ce4255c6 488 Pfam PF02954 Bacterial regulatory protein, Fis family 444 484 7.2E-13 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VSVS12_02308 6513f974b4c6741c5b51cf83ce4255c6 488 SMART SM00382 157 300 5.0E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_02308 6513f974b4c6741c5b51cf83ce4255c6 488 SUPERFAMILY SSF46689 349 486 1.75E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_02308 6513f974b4c6741c5b51cf83ce4255c6 488 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 467 487 3.0E-9 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VSVS12_02308 6513f974b4c6741c5b51cf83ce4255c6 488 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 450 467 3.0E-9 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VSVS12_02308 6513f974b4c6741c5b51cf83ce4255c6 488 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 349 358 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VSVS12_02308 6513f974b4c6741c5b51cf83ce4255c6 488 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VSVS12_02308 6513f974b4c6741c5b51cf83ce4255c6 488 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 223 238 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VSVS12_02308 6513f974b4c6741c5b51cf83ce4255c6 488 Gene3D G3DSA:1.10.10.60 436 488 2.3E-12 T 11-10-2018 VSVS12_02308 6513f974b4c6741c5b51cf83ce4255c6 488 Gene3D G3DSA:3.40.50.2300 1 117 4.5E-7 T 11-10-2018 VSVS12_02308 6513f974b4c6741c5b51cf83ce4255c6 488 SUPERFAMILY SSF52540 137 378 1.96E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02308 6513f974b4c6741c5b51cf83ce4255c6 488 Pfam PF06490 Flagellar regulatory protein FleQ 6 114 5.8E-24 T 11-10-2018 IPR010518 Flagellar regulatory FleQ VSVS12_02152 9d4f8b999a62b7ff60b901117278d708 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 1.1E-42 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VSVS12_02152 9d4f8b999a62b7ff60b901117278d708 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 1.1E-42 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VSVS12_02152 9d4f8b999a62b7ff60b901117278d708 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 1.1E-42 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VSVS12_02152 9d4f8b999a62b7ff60b901117278d708 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 1.1E-42 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VSVS12_02152 9d4f8b999a62b7ff60b901117278d708 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 1.1E-42 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VSVS12_02152 9d4f8b999a62b7ff60b901117278d708 173 Gene3D G3DSA:3.30.420.10 2 159 3.0E-53 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VSVS12_02152 9d4f8b999a62b7ff60b901117278d708 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 7.4E-63 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VSVS12_02152 9d4f8b999a62b7ff60b901117278d708 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 155 1.1E-74 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VSVS12_02152 9d4f8b999a62b7ff60b901117278d708 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 47.7 T 11-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 VSVS12_02152 9d4f8b999a62b7ff60b901117278d708 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 11-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 VSVS12_02152 9d4f8b999a62b7ff60b901117278d708 173 SUPERFAMILY SSF53098 3 156 1.29E-56 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_04131 95ccf8eea0090e238321536291b4f40c 243 SUPERFAMILY SSF52794 148 240 7.67E-30 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VSVS12_04131 95ccf8eea0090e238321536291b4f40c 243 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 150 240 6.0E-17 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VSVS12_04131 95ccf8eea0090e238321536291b4f40c 243 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 150 232 8.6E-29 T 11-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 VSVS12_04131 95ccf8eea0090e238321536291b4f40c 243 Gene3D G3DSA:3.40.50.2300 141 243 9.0E-35 T 11-10-2018 VSVS12_03551 8d1d363c18294c8bbd6150e5ab2cf6bb 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VSVS12_03551 8d1d363c18294c8bbd6150e5ab2cf6bb 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 192 1.1E-4 T 11-10-2018 VSVS12_03551 8d1d363c18294c8bbd6150e5ab2cf6bb 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 246 1.2E-61 T 11-10-2018 VSVS12_03551 8d1d363c18294c8bbd6150e5ab2cf6bb 248 Gene3D G3DSA:3.40.50.720 3 248 8.5E-80 T 11-10-2018 VSVS12_03551 8d1d363c18294c8bbd6150e5ab2cf6bb 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 5.4E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_03551 8d1d363c18294c8bbd6150e5ab2cf6bb 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 5.4E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_03551 8d1d363c18294c8bbd6150e5ab2cf6bb 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 5.4E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_03551 8d1d363c18294c8bbd6150e5ab2cf6bb 248 SUPERFAMILY SSF51735 7 247 1.68E-77 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_03551 8d1d363c18294c8bbd6150e5ab2cf6bb 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 5.6E-43 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_03551 8d1d363c18294c8bbd6150e5ab2cf6bb 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 5.6E-43 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_03551 8d1d363c18294c8bbd6150e5ab2cf6bb 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 5.6E-43 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_03551 8d1d363c18294c8bbd6150e5ab2cf6bb 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 5.6E-43 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_03551 8d1d363c18294c8bbd6150e5ab2cf6bb 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 5.6E-43 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_03551 8d1d363c18294c8bbd6150e5ab2cf6bb 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 5.6E-43 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01587 c6500adbd7eb37a51d8bf562b3e9c38e 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 3.6E-6 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VSVS12_01587 c6500adbd7eb37a51d8bf562b3e9c38e 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 3.6E-6 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VSVS12_01587 c6500adbd7eb37a51d8bf562b3e9c38e 237 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 5 234 2.3E-89 T 11-10-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 VSVS12_01587 c6500adbd7eb37a51d8bf562b3e9c38e 237 Gene3D G3DSA:1.10.10.10 2 70 4.1E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_01587 c6500adbd7eb37a51d8bf562b3e9c38e 237 Gene3D G3DSA:3.40.1410.10 90 225 4.3E-30 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VSVS12_01587 c6500adbd7eb37a51d8bf562b3e9c38e 237 SUPERFAMILY SSF46785 2 73 4.82E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_01587 c6500adbd7eb37a51d8bf562b3e9c38e 237 SMART SM00866 92 229 3.8E-26 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VSVS12_01587 c6500adbd7eb37a51d8bf562b3e9c38e 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 69 3.5E-17 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VSVS12_01587 c6500adbd7eb37a51d8bf562b3e9c38e 237 SMART SM00345 10 69 1.3E-15 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VSVS12_01587 c6500adbd7eb37a51d8bf562b3e9c38e 237 Pfam PF07702 UTRA domain 92 229 1.2E-29 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VSVS12_01587 c6500adbd7eb37a51d8bf562b3e9c38e 237 SUPERFAMILY SSF64288 57 235 2.36E-37 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VSVS12_03048 31390c94d3e45a19aa4ddfc7dbc8a685 110 ProDom PD028709 MEMBRANE INNER YDGC GLPM ALGINATE BIOSYNTHESIS TRANSMEMBRANE REQUIRED FOR UNCHARACTERIZED 22 91 1.0E-13 T 11-10-2018 IPR009707 Membrane protein GlpM/YdgC VSVS12_03048 31390c94d3e45a19aa4ddfc7dbc8a685 110 Pfam PF06942 GlpM protein 6 110 1.1E-43 T 11-10-2018 IPR009707 Membrane protein GlpM/YdgC VSVS12_02319 fe5e5429d432d8fb68185a7e0f869478 174 Pfam PF08534 Redoxin 52 162 1.1E-13 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 VSVS12_02319 fe5e5429d432d8fb68185a7e0f869478 174 Gene3D G3DSA:3.40.30.10 30 173 2.8E-30 T 11-10-2018 VSVS12_02319 fe5e5429d432d8fb68185a7e0f869478 174 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 43 169 1.3E-46 T 11-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 VSVS12_02319 fe5e5429d432d8fb68185a7e0f869478 174 SUPERFAMILY SSF52833 54 165 5.16E-30 T 11-10-2018 IPR036249 Thioredoxin-like superfamily VSVS12_00850 58a4a3127749645cac56d80b94d3ac31 379 Hamap MF_00456 Glutamate 5-kinase [proB]. 14 268 35.87 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VSVS12_00850 58a4a3127749645cac56d80b94d3ac31 379 PRINTS PR00474 Glutamate 5-kinase family signature 51 65 4.0E-54 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 VSVS12_00850 58a4a3127749645cac56d80b94d3ac31 379 PRINTS PR00474 Glutamate 5-kinase family signature 218 238 4.0E-54 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 VSVS12_00850 58a4a3127749645cac56d80b94d3ac31 379 PRINTS PR00474 Glutamate 5-kinase family signature 85 113 4.0E-54 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 VSVS12_00850 58a4a3127749645cac56d80b94d3ac31 379 PRINTS PR00474 Glutamate 5-kinase family signature 125 146 4.0E-54 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 VSVS12_00850 58a4a3127749645cac56d80b94d3ac31 379 PRINTS PR00474 Glutamate 5-kinase family signature 157 184 4.0E-54 T 11-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 VSVS12_00850 58a4a3127749645cac56d80b94d3ac31 379 SUPERFAMILY SSF88697 286 376 3.65E-26 T 11-10-2018 IPR015947 PUA-like superfamily VSVS12_00850 58a4a3127749645cac56d80b94d3ac31 379 ProSitePatterns PS00902 Glutamate 5-kinase signature. 216 233 - T 11-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VSVS12_00850 58a4a3127749645cac56d80b94d3ac31 379 SUPERFAMILY SSF53633 15 265 3.8E-66 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VSVS12_00850 58a4a3127749645cac56d80b94d3ac31 379 TIGRFAM TIGR01027 proB: glutamate 5-kinase 14 376 2.6E-150 T 11-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VSVS12_00850 58a4a3127749645cac56d80b94d3ac31 379 PIRSF PIRSF000729 9 378 2.2E-138 T 11-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 VSVS12_00850 58a4a3127749645cac56d80b94d3ac31 379 Gene3D G3DSA:2.30.130.10 275 377 6.7E-34 T 11-10-2018 IPR036974 PUA domain superfamily GO:0003723 VSVS12_00850 58a4a3127749645cac56d80b94d3ac31 379 Pfam PF00696 Amino acid kinase family 15 243 9.6E-43 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VSVS12_00850 58a4a3127749645cac56d80b94d3ac31 379 Gene3D G3DSA:3.40.1160.10 7 274 4.2E-86 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VSVS12_00850 58a4a3127749645cac56d80b94d3ac31 379 SMART SM00359 286 369 1.5E-23 T 11-10-2018 IPR002478 PUA domain GO:0003723 VSVS12_00850 58a4a3127749645cac56d80b94d3ac31 379 Pfam PF01472 PUA domain 286 360 2.0E-24 T 11-10-2018 IPR002478 PUA domain GO:0003723 VSVS12_01767 756a522ac1e46568942f505652711f89 278 SUPERFAMILY SSF103088 146 259 7.98E-30 T 11-10-2018 IPR036737 OmpA-like domain superfamily VSVS12_01767 756a522ac1e46568942f505652711f89 278 PRINTS PR01021 OMPA domain signature 159 181 1.1E-9 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VSVS12_01767 756a522ac1e46568942f505652711f89 278 PRINTS PR01021 OMPA domain signature 204 220 1.1E-9 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VSVS12_01767 756a522ac1e46568942f505652711f89 278 PRINTS PR01021 OMPA domain signature 189 204 1.1E-9 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VSVS12_01767 756a522ac1e46568942f505652711f89 278 Gene3D G3DSA:3.30.1330.60 134 268 4.6E-28 T 11-10-2018 IPR036737 OmpA-like domain superfamily VSVS12_01767 756a522ac1e46568942f505652711f89 278 Pfam PF00691 OmpA family 159 253 5.1E-21 T 11-10-2018 IPR006665 OmpA-like domain VSVS12_00039 cce7625df48ca062757cc3752afb25c6 417 SUPERFAMILY SSF50621 263 414 7.53E-51 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VSVS12_00039 cce7625df48ca062757cc3752afb25c6 417 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 31 370 1.2E-24 T 11-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 VSVS12_00039 cce7625df48ca062757cc3752afb25c6 417 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 58 76 - T 11-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site VSVS12_00039 cce7625df48ca062757cc3752afb25c6 417 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 36 282 6.9E-73 T 11-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 VSVS12_00039 cce7625df48ca062757cc3752afb25c6 417 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 5 412 2.2E-165 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VSVS12_00039 cce7625df48ca062757cc3752afb25c6 417 Gene3D G3DSA:2.40.37.10 17 404 4.6E-150 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VSVS12_00039 cce7625df48ca062757cc3752afb25c6 417 SUPERFAMILY SSF51419 27 284 4.07E-81 T 11-10-2018 IPR029066 PLP-binding barrel VSVS12_00039 cce7625df48ca062757cc3752afb25c6 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 165 174 5.6E-30 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VSVS12_00039 cce7625df48ca062757cc3752afb25c6 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 76 93 5.6E-30 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VSVS12_00039 cce7625df48ca062757cc3752afb25c6 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 300 318 5.6E-30 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VSVS12_00039 cce7625df48ca062757cc3752afb25c6 417 PRINTS PR01181 Diaminopimelate decarboxylase signature 380 402 5.6E-30 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VSVS12_00039 cce7625df48ca062757cc3752afb25c6 417 Gene3D G3DSA:3.20.20.10 35 277 4.6E-150 T 11-10-2018 IPR029066 PLP-binding barrel VSVS12_00039 cce7625df48ca062757cc3752afb25c6 417 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 16 413 40.957 T 11-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VSVS12_00039 cce7625df48ca062757cc3752afb25c6 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 272 291 2.9E-25 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VSVS12_00039 cce7625df48ca062757cc3752afb25c6 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 78 90 2.9E-25 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VSVS12_00039 cce7625df48ca062757cc3752afb25c6 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 191 204 2.9E-25 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VSVS12_00039 cce7625df48ca062757cc3752afb25c6 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 370 383 2.9E-25 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VSVS12_00039 cce7625df48ca062757cc3752afb25c6 417 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 58 76 2.9E-25 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VSVS12_02149 aa4b39617a3a633dfa581fd4adf8fee5 528 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 1.9E-177 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 VSVS12_02149 aa4b39617a3a633dfa581fd4adf8fee5 528 PIRSF PIRSF006446 1 331 4.7E-115 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 VSVS12_02149 aa4b39617a3a633dfa581fd4adf8fee5 528 PIRSF PIRSF006446 353 526 6.1E-33 T 11-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 VSVS12_03383 64b279eaa5ba193b95109c4fc445018d 339 Pfam PF00005 ABC transporter 20 161 8.6E-37 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_03383 64b279eaa5ba193b95109c4fc445018d 339 SMART SM00382 28 211 1.2E-20 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_03383 64b279eaa5ba193b95109c4fc445018d 339 SUPERFAMILY SSF52540 4 240 1.9E-88 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03383 64b279eaa5ba193b95109c4fc445018d 339 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_03383 64b279eaa5ba193b95109c4fc445018d 339 Gene3D G3DSA:3.40.50.300 1 237 8.1E-83 T 11-10-2018 VSVS12_03383 64b279eaa5ba193b95109c4fc445018d 339 Pfam PF08402 TOBE domain 257 330 5.5E-6 T 11-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VSVS12_03383 64b279eaa5ba193b95109c4fc445018d 339 SUPERFAMILY SSF50331 250 334 1.76E-6 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VSVS12_01187 1932c6302d219515ca3a978188cf9c2f 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 551 569 4.8E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_01187 1932c6302d219515ca3a978188cf9c2f 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 575 588 4.8E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_01187 1932c6302d219515ca3a978188cf9c2f 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 536 4.8E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_01187 1932c6302d219515ca3a978188cf9c2f 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 540 550 4.8E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_01187 1932c6302d219515ca3a978188cf9c2f 610 Gene3D G3DSA:3.30.565.10 440 598 1.7E-39 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_01187 1932c6302d219515ca3a978188cf9c2f 610 Gene3D G3DSA:1.10.287.130 348 435 2.2E-19 T 11-10-2018 VSVS12_01187 1932c6302d219515ca3a978188cf9c2f 610 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 485 588 6.5E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_01187 1932c6302d219515ca3a978188cf9c2f 610 Pfam PF00512 His Kinase A (phospho-acceptor) domain 373 437 1.7E-10 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_01187 1932c6302d219515ca3a978188cf9c2f 610 SUPERFAMILY SSF47384 360 437 1.04E-11 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VSVS12_01187 1932c6302d219515ca3a978188cf9c2f 610 SMART SM00387 483 591 3.6E-27 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_01187 1932c6302d219515ca3a978188cf9c2f 610 Gene3D G3DSA:3.30.450.20 40 278 1.3E-85 T 11-10-2018 VSVS12_01187 1932c6302d219515ca3a978188cf9c2f 610 Pfam PF02743 Cache domain 34 271 3.2E-14 T 11-10-2018 IPR033479 Double Cache domain 1 VSVS12_01187 1932c6302d219515ca3a978188cf9c2f 610 SUPERFAMILY SSF103190 47 186 3.92E-27 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VSVS12_01187 1932c6302d219515ca3a978188cf9c2f 610 Gene3D G3DSA:3.30.450.20 53 174 1.3E-85 T 11-10-2018 VSVS12_01187 1932c6302d219515ca3a978188cf9c2f 610 PIRSF PIRSF036431 1 598 1.6E-186 T 11-10-2018 IPR017055 Signal transduction histidine kinase, DctB (C4-dicarboxylate transport system regulator) VSVS12_01187 1932c6302d219515ca3a978188cf9c2f 610 SMART SM00388 372 440 1.0E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_01187 1932c6302d219515ca3a978188cf9c2f 610 SUPERFAMILY SSF55874 435 588 1.96E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_00452 f07fb857f99dc7147b26bb2bc433802c 263 SMART SM01150 3 262 4.8E-103 T 11-10-2018 IPR009770 Domain of unknown function DUF1338 VSVS12_00452 f07fb857f99dc7147b26bb2bc433802c 263 Gene3D G3DSA:3.10.180.50 2 239 1.3E-90 T 11-10-2018 VSVS12_00452 f07fb857f99dc7147b26bb2bc433802c 263 Pfam PF07063 Domain of unknown function (DUF1338) 32 261 3.0E-44 T 11-10-2018 IPR009770 Domain of unknown function DUF1338 VSVS12_01207 0a6b6da38af190823899696100622b3d 104 Gene3D G3DSA:3.40.50.300 1 98 2.1E-15 T 11-10-2018 VSVS12_01207 0a6b6da38af190823899696100622b3d 104 SUPERFAMILY SSF52540 2 77 1.76E-16 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02429 0ed2afdf045d6514b47a81b2c15700a8 470 Pfam PF01979 Amidohydrolase family 83 436 3.1E-59 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VSVS12_02429 0ed2afdf045d6514b47a81b2c15700a8 470 Gene3D G3DSA:2.30.40.10 37 449 3.8E-136 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VSVS12_02429 0ed2afdf045d6514b47a81b2c15700a8 470 Gene3D G3DSA:3.20.20.140 87 381 3.8E-136 T 11-10-2018 VSVS12_02429 0ed2afdf045d6514b47a81b2c15700a8 470 SUPERFAMILY SSF51556 86 389 1.61E-77 T 11-10-2018 IPR032466 Metal-dependent hydrolase VSVS12_02429 0ed2afdf045d6514b47a81b2c15700a8 470 SUPERFAMILY SSF51338 29 455 1.73E-31 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VSVS12_00434 0e7c1eba300c0e7bc9ab58cb9070e500 397 Pfam PF01610 Transposase 149 388 9.8E-64 T 11-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain VSVS12_00434 0e7c1eba300c0e7bc9ab58cb9070e500 397 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 84 130 3.1E-11 T 11-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain VSVS12_00433 0e7c1eba300c0e7bc9ab58cb9070e500 397 Pfam PF01610 Transposase 149 388 9.8E-64 T 11-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain VSVS12_00433 0e7c1eba300c0e7bc9ab58cb9070e500 397 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 84 130 3.1E-11 T 11-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain VSVS12_03525 2da6b671798757603c57214f626762ce 412 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 11 397 9.0E-62 T 11-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 VSVS12_03525 2da6b671798757603c57214f626762ce 412 Gene3D G3DSA:1.10.4160.10 3 411 1.2E-45 T 11-10-2018 IPR038271 Purine-cytosine permease superfamily VSVS12_02168 285a5b27c5484aa78b449e73afb1b2c4 741 PIRSF PIRSF009407 1 741 0.0 T 11-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 VSVS12_02168 285a5b27c5484aa78b449e73afb1b2c4 741 SUPERFAMILY SSF53659 5 740 0.0 T 11-10-2018 VSVS12_02168 285a5b27c5484aa78b449e73afb1b2c4 741 Gene3D G3DSA:3.40.718.10 409 654 8.2E-9 T 11-10-2018 VSVS12_02168 285a5b27c5484aa78b449e73afb1b2c4 741 TIGRFAM TIGR00178 monomer_idh: isocitrate dehydrogenase, NADP-dependent 1 740 0.0 T 11-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 VSVS12_02168 285a5b27c5484aa78b449e73afb1b2c4 741 Pfam PF03971 Monomeric isocitrate dehydrogenase 7 740 0.0 T 11-10-2018 IPR004436 Isocitrate dehydrogenase NADP-dependent, monomeric GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 VSVS12_00723 a0eebc5443826dcaa26ad4191cd39e4a 157 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 154 5.7E-53 T 11-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 VSVS12_00723 a0eebc5443826dcaa26ad4191cd39e4a 157 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 47 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VSVS12_00723 a0eebc5443826dcaa26ad4191cd39e4a 157 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VSVS12_00723 a0eebc5443826dcaa26ad4191cd39e4a 157 Gene3D G3DSA:1.10.287.180 1 74 5.4E-25 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 VSVS12_00723 a0eebc5443826dcaa26ad4191cd39e4a 157 Pfam PF03449 Transcription elongation factor, N-terminal 4 73 1.8E-24 T 11-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 VSVS12_00723 a0eebc5443826dcaa26ad4191cd39e4a 157 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 31.623 T 11-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 VSVS12_00723 a0eebc5443826dcaa26ad4191cd39e4a 157 SUPERFAMILY SSF46557 2 75 1.07E-24 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 VSVS12_00723 a0eebc5443826dcaa26ad4191cd39e4a 157 Gene3D G3DSA:3.10.50.30 75 157 3.5E-30 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 VSVS12_00723 a0eebc5443826dcaa26ad4191cd39e4a 157 PIRSF PIRSF006092 1 157 1.9E-47 T 11-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 VSVS12_00723 a0eebc5443826dcaa26ad4191cd39e4a 157 SUPERFAMILY SSF54534 81 156 2.22E-23 T 11-10-2018 VSVS12_00723 a0eebc5443826dcaa26ad4191cd39e4a 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 82 156 1.7E-27 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VSVS12_02167 7c2978dad3e00f411b32ced7a8dbb889 73 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 11-10-2018 IPR019844 Cold-shock conserved site VSVS12_02167 7c2978dad3e00f411b32ced7a8dbb889 73 PRINTS PR00050 Cold shock protein signature 4 19 1.8E-15 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VSVS12_02167 7c2978dad3e00f411b32ced7a8dbb889 73 PRINTS PR00050 Cold shock protein signature 25 34 1.8E-15 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VSVS12_02167 7c2978dad3e00f411b32ced7a8dbb889 73 PRINTS PR00050 Cold shock protein signature 40 58 1.8E-15 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VSVS12_02167 7c2978dad3e00f411b32ced7a8dbb889 73 SMART SM00357 3 67 1.0E-26 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 VSVS12_02167 7c2978dad3e00f411b32ced7a8dbb889 73 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 68 1.2E-40 T 11-10-2018 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355 VSVS12_02167 7c2978dad3e00f411b32ced7a8dbb889 73 Pfam PF00313 'Cold-shock' DNA-binding domain 3 66 1.5E-27 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VSVS12_02167 7c2978dad3e00f411b32ced7a8dbb889 73 PIRSF PIRSF002599 1 73 3.0E-23 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 VSVS12_02167 7c2978dad3e00f411b32ced7a8dbb889 73 Gene3D G3DSA:2.40.50.140 1 66 3.3E-25 T 11-10-2018 VSVS12_02167 7c2978dad3e00f411b32ced7a8dbb889 73 SUPERFAMILY SSF50249 1 66 1.05E-22 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_00777 11adef40bb7425392357e5ab15ad6a4d 651 SUPERFAMILY SSF48435 36 484 5.1E-130 T 11-10-2018 IPR008939 Lytic transglycosylase, superhelical U-shaped GO:0004553|GO:0042597 VSVS12_00777 11adef40bb7425392357e5ab15ad6a4d 651 SUPERFAMILY SSF53955 487 641 2.81E-46 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily VSVS12_00777 11adef40bb7425392357e5ab15ad6a4d 651 Pfam PF01464 Transglycosylase SLT domain 494 605 1.4E-28 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 VSVS12_00777 11adef40bb7425392357e5ab15ad6a4d 651 Gene3D G3DSA:1.10.1240.20 414 479 2.7E-22 T 11-10-2018 IPR037061 Lytic transglycosylase, superhelical linker domain superfamily GO:0004553|GO:0042597 VSVS12_00777 11adef40bb7425392357e5ab15ad6a4d 651 Gene3D G3DSA:1.25.20.10 35 396 2.5E-104 T 11-10-2018 VSVS12_00777 11adef40bb7425392357e5ab15ad6a4d 651 Pfam PF14718 Soluble lytic murein transglycosylase L domain 415 479 1.2E-24 T 11-10-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 VSVS12_00777 11adef40bb7425392357e5ab15ad6a4d 651 Gene3D G3DSA:1.10.530.10 481 651 1.5E-47 T 11-10-2018 VSVS12_00068 184216a1b39c775782e9c8d451369dfb 226 Hamap MF_02088 Probable queuosine precursor transporter. 7 214 15.76 T 11-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 VSVS12_00068 184216a1b39c775782e9c8d451369dfb 226 Pfam PF02592 Putative vitamin uptake transporter 43 199 1.1E-38 T 11-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 VSVS12_00068 184216a1b39c775782e9c8d451369dfb 226 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 13 204 5.3E-63 T 11-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 VSVS12_04168 01d153a616ef7f5bd86808d445f2cfe6 1703 SMART SM00267 1535 1702 7.4E-60 T 11-10-2018 IPR000160 GGDEF domain VSVS12_04168 01d153a616ef7f5bd86808d445f2cfe6 1703 Pfam PF13191 AAA ATPase domain 297 485 6.2E-38 T 11-10-2018 VSVS12_04168 01d153a616ef7f5bd86808d445f2cfe6 1703 SUPERFAMILY SSF52540 292 569 2.0E-20 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_04168 01d153a616ef7f5bd86808d445f2cfe6 1703 Pfam PF00069 Protein kinase domain 10 259 4.2E-33 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VSVS12_04168 01d153a616ef7f5bd86808d445f2cfe6 1703 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 1544 1701 2.7E-44 T 11-10-2018 IPR000160 GGDEF domain VSVS12_04168 01d153a616ef7f5bd86808d445f2cfe6 1703 Pfam PF00990 Diguanylate cyclase, GGDEF domain 1547 1698 5.5E-43 T 11-10-2018 IPR000160 GGDEF domain VSVS12_04168 01d153a616ef7f5bd86808d445f2cfe6 1703 ProSitePatterns PS00109 Tyrosine protein kinases specific active-site signature. 123 135 - T 11-10-2018 IPR008266 Tyrosine-protein kinase, active site GO:0004672|GO:0006468 VSVS12_04168 01d153a616ef7f5bd86808d445f2cfe6 1703 SUPERFAMILY SSF55781 1321 1525 3.71E-18 T 11-10-2018 VSVS12_04168 01d153a616ef7f5bd86808d445f2cfe6 1703 SUPERFAMILY SSF56112 3 260 9.58E-54 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily VSVS12_04168 01d153a616ef7f5bd86808d445f2cfe6 1703 Gene3D G3DSA:3.30.450.40 1310 1523 3.5E-25 T 11-10-2018 IPR029016 GAF-like domain superfamily VSVS12_04168 01d153a616ef7f5bd86808d445f2cfe6 1703 Gene3D G3DSA:3.40.50.300 299 491 9.3E-16 T 11-10-2018 VSVS12_04168 01d153a616ef7f5bd86808d445f2cfe6 1703 Pfam PF01590 GAF domain 1333 1501 5.6E-9 T 11-10-2018 IPR003018 GAF domain GO:0005515 VSVS12_04168 01d153a616ef7f5bd86808d445f2cfe6 1703 SMART SM00065 1333 1511 6.7E-7 T 11-10-2018 IPR003018 GAF domain GO:0005515 VSVS12_04168 01d153a616ef7f5bd86808d445f2cfe6 1703 Gene3D G3DSA:1.10.510.10 1 298 3.2E-44 T 11-10-2018 VSVS12_04168 01d153a616ef7f5bd86808d445f2cfe6 1703 SUPERFAMILY SSF55073 1551 1701 4.24E-42 T 11-10-2018 IPR029787 Nucleotide cyclase VSVS12_04168 01d153a616ef7f5bd86808d445f2cfe6 1703 Gene3D G3DSA:3.30.70.270 1532 1701 2.1E-51 T 11-10-2018 VSVS12_04369 9fdc49e197dd7d8a5bec34a5c0fd7aea 376 Gene3D G3DSA:2.40.50.100 62 96 2.0E-8 T 11-10-2018 VSVS12_04369 9fdc49e197dd7d8a5bec34a5c0fd7aea 376 Gene3D G3DSA:2.40.50.100 220 255 2.3E-11 T 11-10-2018 VSVS12_04369 9fdc49e197dd7d8a5bec34a5c0fd7aea 376 Pfam PF13533 Biotin-lipoyl like 64 111 8.0E-9 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VSVS12_04369 9fdc49e197dd7d8a5bec34a5c0fd7aea 376 SUPERFAMILY SSF111369 62 115 1.11E-6 T 11-10-2018 VSVS12_04369 9fdc49e197dd7d8a5bec34a5c0fd7aea 376 SUPERFAMILY SSF111369 127 188 1.57E-5 T 11-10-2018 VSVS12_04369 9fdc49e197dd7d8a5bec34a5c0fd7aea 376 Gene3D G3DSA:1.10.287.470 199 219 2.3E-11 T 11-10-2018 VSVS12_04369 9fdc49e197dd7d8a5bec34a5c0fd7aea 376 Gene3D G3DSA:2.40.30.170 257 315 2.3E-11 T 11-10-2018 VSVS12_04369 9fdc49e197dd7d8a5bec34a5c0fd7aea 376 Gene3D G3DSA:1.10.287.470 121 190 1.2E-10 T 11-10-2018 VSVS12_04369 9fdc49e197dd7d8a5bec34a5c0fd7aea 376 Gene3D G3DSA:1.10.287.470 97 114 2.0E-8 T 11-10-2018 VSVS12_04560 8c29b11a1d2608fe423f4c82cb1d341e 294 Pfam PF03466 LysR substrate binding domain 90 290 1.5E-13 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_04560 8c29b11a1d2608fe423f4c82cb1d341e 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 9.1E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_04560 8c29b11a1d2608fe423f4c82cb1d341e 294 SUPERFAMILY SSF46785 4 84 6.98E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_04560 8c29b11a1d2608fe423f4c82cb1d341e 294 Gene3D G3DSA:1.10.10.10 5 94 1.5E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_04560 8c29b11a1d2608fe423f4c82cb1d341e 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.1E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_04560 8c29b11a1d2608fe423f4c82cb1d341e 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.1E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_04560 8c29b11a1d2608fe423f4c82cb1d341e 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.1E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_04560 8c29b11a1d2608fe423f4c82cb1d341e 294 Gene3D G3DSA:3.40.190.10 158 263 1.5E-29 T 11-10-2018 VSVS12_04560 8c29b11a1d2608fe423f4c82cb1d341e 294 SUPERFAMILY SSF53850 90 293 8.14E-17 T 11-10-2018 VSVS12_04560 8c29b11a1d2608fe423f4c82cb1d341e 294 Gene3D G3DSA:3.40.190.10 101 289 1.5E-29 T 11-10-2018 VSVS12_04458 18673e1a3181fb832b541fd41ff83356 144 Gene3D G3DSA:1.10.10.10 98 142 1.8E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_04458 18673e1a3181fb832b541fd41ff83356 144 Gene3D G3DSA:1.10.10.10 52 97 4.9E-8 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_04458 18673e1a3181fb832b541fd41ff83356 144 Pfam PF02631 RecX family 29 143 1.9E-19 T 11-10-2018 IPR003783 Regulatory protein RecX GO:0006282 VSVS12_01384 c6ad74be9b35dd4d598c370f7872ac6c 280 Pfam PF04397 LytTr DNA-binding domain 186 279 1.4E-26 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 VSVS12_01384 c6ad74be9b35dd4d598c370f7872ac6c 280 Gene3D G3DSA:3.40.50.2300 2 149 1.9E-30 T 11-10-2018 VSVS12_01384 c6ad74be9b35dd4d598c370f7872ac6c 280 Pfam PF00072 Response regulator receiver domain 7 130 6.5E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_01384 c6ad74be9b35dd4d598c370f7872ac6c 280 SMART SM00850 185 280 2.4E-28 T 11-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 VSVS12_01384 c6ad74be9b35dd4d598c370f7872ac6c 280 Gene3D G3DSA:2.40.50.40 176 245 1.3E-9 T 11-10-2018 VSVS12_01384 c6ad74be9b35dd4d598c370f7872ac6c 280 SUPERFAMILY SSF52172 4 151 1.42E-29 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_01384 c6ad74be9b35dd4d598c370f7872ac6c 280 SMART SM00448 4 132 5.6E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_00334 430dca0dd66b3c7915fa73a5f303d154 164 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 9 161 1.7E-58 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VSVS12_00334 430dca0dd66b3c7915fa73a5f303d154 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 7 25 2.5E-48 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VSVS12_00334 430dca0dd66b3c7915fa73a5f303d154 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 25 46 2.5E-48 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VSVS12_00334 430dca0dd66b3c7915fa73a5f303d154 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 117 139 2.5E-48 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VSVS12_00334 430dca0dd66b3c7915fa73a5f303d154 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 90 106 2.5E-48 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VSVS12_00334 430dca0dd66b3c7915fa73a5f303d154 164 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 54 78 2.5E-48 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VSVS12_00334 430dca0dd66b3c7915fa73a5f303d154 164 SUPERFAMILY SSF52374 8 161 8.04E-44 T 11-10-2018 VSVS12_00334 430dca0dd66b3c7915fa73a5f303d154 164 Gene3D G3DSA:3.40.50.620 1 163 6.5E-53 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VSVS12_00334 430dca0dd66b3c7915fa73a5f303d154 164 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 8 67 1.1E-18 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VSVS12_00334 430dca0dd66b3c7915fa73a5f303d154 164 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 7 163 35.236 T 11-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 VSVS12_00334 430dca0dd66b3c7915fa73a5f303d154 164 Pfam PF01467 Cytidylyltransferase-like 10 138 7.3E-20 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VSVS12_04170 67ee9b6eaadcbba6cc796c12fd5d43f6 150 Pfam PF12098 Protein of unknown function (DUF3574) 53 141 2.2E-17 T 11-10-2018 IPR021957 Protein of unknown function DUF3574 VSVS12_01182 afbe849af430aaa9dc097ad052c7e82b 173 Gene3D G3DSA:3.40.1570.10 2 173 1.5E-55 T 11-10-2018 VSVS12_01182 afbe849af430aaa9dc097ad052c7e82b 173 PIRSF PIRSF030840 1 173 3.3E-58 T 11-10-2018 IPR010413 Heme utilization carrier protein HutX-like VSVS12_01182 afbe849af430aaa9dc097ad052c7e82b 173 Pfam PF06228 Haem utilisation ChuX/HutX 31 161 1.4E-34 T 11-10-2018 IPR010413 Heme utilization carrier protein HutX-like VSVS12_01182 afbe849af430aaa9dc097ad052c7e82b 173 TIGRFAM TIGR04108 HutX: putative heme utilization carrier protein HutX 15 166 5.9E-59 T 11-10-2018 IPR010413 Heme utilization carrier protein HutX-like VSVS12_01182 afbe849af430aaa9dc097ad052c7e82b 173 SUPERFAMILY SSF144064 4 170 1.83E-49 T 11-10-2018 VSVS12_01331 4ed1517289ef218793c8a7c0d356b237 205 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VSVS12_01331 4ed1517289ef218793c8a7c0d356b237 205 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 3 163 1.6E-82 T 11-10-2018 IPR014297 Dimethylsulphoxide reductase, chain B VSVS12_01331 4ed1517289ef218793c8a7c0d356b237 205 Pfam PF12800 4Fe-4S binding domain 11 25 0.032 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VSVS12_01331 4ed1517289ef218793c8a7c0d356b237 205 SUPERFAMILY SSF54862 1 195 5.34E-68 T 11-10-2018 VSVS12_01331 4ed1517289ef218793c8a7c0d356b237 205 Pfam PF13247 4Fe-4S dicluster domain 58 153 7.3E-30 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VSVS12_01331 4ed1517289ef218793c8a7c0d356b237 205 Gene3D G3DSA:3.30.70.20 1 204 3.7E-55 T 11-10-2018 VSVS12_00900 20e715ed65e03dac44a9ee73730e4f1c 41 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 15.816 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00900 20e715ed65e03dac44a9ee73730e4f1c 41 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 1.9E-7 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00900 20e715ed65e03dac44a9ee73730e4f1c 41 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00900 20e715ed65e03dac44a9ee73730e4f1c 41 Pfam PF00444 Ribosomal protein L36 1 40 4.9E-16 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00900 20e715ed65e03dac44a9ee73730e4f1c 41 SUPERFAMILY SSF57840 5 40 1.7E-13 T 11-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_01200 efb852ca708354211d2b93a01b6ed4bf 231 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 6 226 1.6E-57 T 11-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VSVS12_01200 efb852ca708354211d2b93a01b6ed4bf 231 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 3 231 40.053 T 11-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VSVS12_01200 efb852ca708354211d2b93a01b6ed4bf 231 SUPERFAMILY SSF51366 1 228 1.18E-75 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VSVS12_01200 efb852ca708354211d2b93a01b6ed4bf 231 SMART SM00934 5 226 3.7E-100 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VSVS12_01200 efb852ca708354211d2b93a01b6ed4bf 231 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 57 70 - T 11-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VSVS12_01200 efb852ca708354211d2b93a01b6ed4bf 231 Gene3D G3DSA:3.20.20.70 2 230 7.4E-85 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_01200 efb852ca708354211d2b93a01b6ed4bf 231 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 225 3.1E-49 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VSVS12_01772 bbd94ed2faeb067868066df1e0629ad8 489 Gene3D G3DSA:3.40.50.2300 1 132 1.4E-27 T 11-10-2018 VSVS12_01772 bbd94ed2faeb067868066df1e0629ad8 489 Gene3D G3DSA:1.10.10.60 434 476 2.8E-8 T 11-10-2018 VSVS12_01772 bbd94ed2faeb067868066df1e0629ad8 489 Pfam PF00158 Sigma-54 interaction domain 143 309 2.1E-67 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VSVS12_01772 bbd94ed2faeb067868066df1e0629ad8 489 Gene3D G3DSA:1.10.8.60 314 394 1.9E-24 T 11-10-2018 VSVS12_01772 bbd94ed2faeb067868066df1e0629ad8 489 Pfam PF02954 Bacterial regulatory protein, Fis family 439 475 4.4E-8 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VSVS12_01772 bbd94ed2faeb067868066df1e0629ad8 489 SUPERFAMILY SSF46689 432 479 3.27E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_01772 bbd94ed2faeb067868066df1e0629ad8 489 SUPERFAMILY SSF52540 142 384 1.06E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01772 bbd94ed2faeb067868066df1e0629ad8 489 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VSVS12_01772 bbd94ed2faeb067868066df1e0629ad8 489 Pfam PF00072 Response regulator receiver domain 5 114 7.7E-23 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_01772 bbd94ed2faeb067868066df1e0629ad8 489 SMART SM00382 162 304 3.0E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_01772 bbd94ed2faeb067868066df1e0629ad8 489 SMART SM00448 3 114 4.6E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_01772 bbd94ed2faeb067868066df1e0629ad8 489 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VSVS12_01772 bbd94ed2faeb067868066df1e0629ad8 489 Gene3D G3DSA:3.40.50.300 133 313 1.5E-62 T 11-10-2018 VSVS12_01772 bbd94ed2faeb067868066df1e0629ad8 489 SUPERFAMILY SSF52172 4 186 3.7E-35 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_01092 de1887c470c33fd4165d1a8d1995ff6b 283 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 33 263 5.9E-48 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VSVS12_01092 de1887c470c33fd4165d1a8d1995ff6b 283 SUPERFAMILY SSF52518 28 267 1.79E-73 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold VSVS12_01092 de1887c470c33fd4165d1a8d1995ff6b 283 Gene3D G3DSA:3.40.50.970 7 282 3.4E-83 T 11-10-2018 VSVS12_02421 f8a646f6f2b2cc89cc0a6b07144dd213 554 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 551 4.0E-176 T 11-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 VSVS12_02421 f8a646f6f2b2cc89cc0a6b07144dd213 554 PIRSF PIRSF003128 1 554 1.4E-164 T 11-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 VSVS12_02421 f8a646f6f2b2cc89cc0a6b07144dd213 554 SUPERFAMILY SSF52540 4 504 2.77E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02421 f8a646f6f2b2cc89cc0a6b07144dd213 554 SUPERFAMILY SSF52540 1 217 1.86E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02421 f8a646f6f2b2cc89cc0a6b07144dd213 554 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 507 2.4E-18 T 11-10-2018 IPR003395 RecF/RecN/SMC, N-terminal VSVS12_00719 f28d169d7b4f663668f8e67fb9c046e8 395 SUPERFAMILY SSF52374 6 315 1.97E-99 T 11-10-2018 VSVS12_00719 f28d169d7b4f663668f8e67fb9c046e8 395 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VSVS12_00719 f28d169d7b4f663668f8e67fb9c046e8 395 SMART SM00363 334 393 8.4E-4 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00719 f28d169d7b4f663668f8e67fb9c046e8 395 Gene3D G3DSA:3.10.290.10 326 394 3.9E-16 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VSVS12_00719 f28d169d7b4f663668f8e67fb9c046e8 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 161 176 4.4E-25 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VSVS12_00719 f28d169d7b4f663668f8e67fb9c046e8 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 211 223 4.4E-25 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VSVS12_00719 f28d169d7b4f663668f8e67fb9c046e8 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 4.4E-25 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VSVS12_00719 f28d169d7b4f663668f8e67fb9c046e8 395 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 178 200 4.4E-25 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VSVS12_00719 f28d169d7b4f663668f8e67fb9c046e8 395 Gene3D G3DSA:1.10.240.10 218 325 1.1E-33 T 11-10-2018 VSVS12_00719 f28d169d7b4f663668f8e67fb9c046e8 395 Gene3D G3DSA:3.40.50.620 5 217 1.4E-74 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VSVS12_00719 f28d169d7b4f663668f8e67fb9c046e8 395 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 2 394 48.49 T 11-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 VSVS12_00719 f28d169d7b4f663668f8e67fb9c046e8 395 SUPERFAMILY SSF55174 320 394 7.65E-17 T 11-10-2018 VSVS12_00719 f28d169d7b4f663668f8e67fb9c046e8 395 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 4 395 2.6E-126 T 11-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 VSVS12_00719 f28d169d7b4f663668f8e67fb9c046e8 395 Pfam PF00579 tRNA synthetases class I (W and Y) 30 316 6.5E-80 T 11-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 VSVS12_01090 5b1c498cf3413b358a57c37c5bf7a625 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 4.3E-5 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VSVS12_01090 5b1c498cf3413b358a57c37c5bf7a625 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 4.3E-5 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VSVS12_01090 5b1c498cf3413b358a57c37c5bf7a625 242 SMART SM00345 12 71 7.1E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VSVS12_01090 5b1c498cf3413b358a57c37c5bf7a625 242 Gene3D G3DSA:3.40.1410.10 79 239 1.4E-26 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VSVS12_01090 5b1c498cf3413b358a57c37c5bf7a625 242 SUPERFAMILY SSF46785 9 75 1.38E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_01090 5b1c498cf3413b358a57c37c5bf7a625 242 SMART SM00866 94 235 5.9E-22 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VSVS12_01090 5b1c498cf3413b358a57c37c5bf7a625 242 Gene3D G3DSA:1.10.10.10 6 71 4.5E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_01090 5b1c498cf3413b358a57c37c5bf7a625 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 71 3.7E-12 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VSVS12_01090 5b1c498cf3413b358a57c37c5bf7a625 242 SUPERFAMILY SSF64288 59 241 5.18E-30 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VSVS12_01090 5b1c498cf3413b358a57c37c5bf7a625 242 Pfam PF07702 UTRA domain 95 234 3.1E-22 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VSVS12_02053 f68d73f9568940c81eb21418ab6bd07b 331 Gene3D G3DSA:3.40.50.300 2 331 1.3E-72 T 11-10-2018 VSVS12_02053 f68d73f9568940c81eb21418ab6bd07b 331 SUPERFAMILY SSF52540 4 268 7.04E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02053 f68d73f9568940c81eb21418ab6bd07b 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 3.0E-21 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VSVS12_02053 f68d73f9568940c81eb21418ab6bd07b 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 3.3E-15 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VSVS12_02053 f68d73f9568940c81eb21418ab6bd07b 331 Pfam PF00005 ABC transporter 24 187 3.5E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_02053 f68d73f9568940c81eb21418ab6bd07b 331 SMART SM00382 32 237 0.0056 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_01821 284d6827e08f371b7020b6d386d54acf 760 SUPERFAMILY SSF51998 222 738 4.88E-165 T 11-10-2018 VSVS12_01821 284d6827e08f371b7020b6d386d54acf 760 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VSVS12_01821 284d6827e08f371b7020b6d386d54acf 760 Pfam PF03477 ATP cone domain 6 92 9.7E-19 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 VSVS12_01821 284d6827e08f371b7020b6d386d54acf 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 9.7E-40 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VSVS12_01821 284d6827e08f371b7020b6d386d54acf 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 9.7E-40 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VSVS12_01821 284d6827e08f371b7020b6d386d54acf 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 9.7E-40 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VSVS12_01821 284d6827e08f371b7020b6d386d54acf 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 9.7E-40 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VSVS12_01821 284d6827e08f371b7020b6d386d54acf 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 9.7E-40 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VSVS12_01821 284d6827e08f371b7020b6d386d54acf 760 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 9.7E-40 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VSVS12_01821 284d6827e08f371b7020b6d386d54acf 760 Pfam PF02867 Ribonucleotide reductase, barrel domain 663 731 7.3E-7 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VSVS12_01821 284d6827e08f371b7020b6d386d54acf 760 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 1.2E-173 T 11-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VSVS12_01821 284d6827e08f371b7020b6d386d54acf 760 Gene3D G3DSA:3.20.70.20 78 742 5.9E-154 T 11-10-2018 VSVS12_01821 284d6827e08f371b7020b6d386d54acf 760 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 142 219 7.9E-11 T 11-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VSVS12_01821 284d6827e08f371b7020b6d386d54acf 760 SUPERFAMILY SSF48168 10 221 5.62E-73 T 11-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VSVS12_01821 284d6827e08f371b7020b6d386d54acf 760 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 661 3.8E-115 T 11-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VSVS12_02908 4364fb94edd2375a7aa49c0e2826b759 571 SUPERFAMILY SSF54106 409 452 9.94E-10 T 11-10-2018 VSVS12_02908 4364fb94edd2375a7aa49c0e2826b759 571 SMART SM00646 228 388 4.4E-66 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 VSVS12_02908 4364fb94edd2375a7aa49c0e2826b759 571 SUPERFAMILY SSF53187 166 391 6.28E-49 T 11-10-2018 VSVS12_02908 4364fb94edd2375a7aa49c0e2826b759 571 SUPERFAMILY SSF54106 472 516 1.31E-9 T 11-10-2018 VSVS12_02908 4364fb94edd2375a7aa49c0e2826b759 571 Pfam PF01476 LysM domain 527 569 1.8E-13 T 11-10-2018 IPR018392 LysM domain VSVS12_02908 4364fb94edd2375a7aa49c0e2826b759 571 Pfam PF01476 LysM domain 474 515 4.3E-12 T 11-10-2018 IPR018392 LysM domain VSVS12_02908 4364fb94edd2375a7aa49c0e2826b759 571 Pfam PF01476 LysM domain 410 452 9.1E-13 T 11-10-2018 IPR018392 LysM domain VSVS12_02908 4364fb94edd2375a7aa49c0e2826b759 571 SMART SM00257 409 452 7.9E-14 T 11-10-2018 IPR018392 LysM domain VSVS12_02908 4364fb94edd2375a7aa49c0e2826b759 571 SMART SM00257 473 516 8.1E-13 T 11-10-2018 IPR018392 LysM domain VSVS12_02908 4364fb94edd2375a7aa49c0e2826b759 571 SMART SM00257 526 569 4.1E-15 T 11-10-2018 IPR018392 LysM domain VSVS12_02908 4364fb94edd2375a7aa49c0e2826b759 571 Gene3D G3DSA:3.10.350.10 401 457 1.3E-15 T 11-10-2018 IPR036779 LysM domain superfamily VSVS12_02908 4364fb94edd2375a7aa49c0e2826b759 571 Gene3D G3DSA:3.10.350.10 461 524 4.3E-16 T 11-10-2018 IPR036779 LysM domain superfamily VSVS12_02908 4364fb94edd2375a7aa49c0e2826b759 571 Pfam PF11741 AMIN domain 32 134 7.0E-17 T 11-10-2018 IPR021731 AMIN domain VSVS12_02908 4364fb94edd2375a7aa49c0e2826b759 571 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 168 388 1.2E-45 T 11-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 VSVS12_02908 4364fb94edd2375a7aa49c0e2826b759 571 Gene3D G3DSA:2.60.40.3500 22 136 3.1E-24 T 11-10-2018 VSVS12_02908 4364fb94edd2375a7aa49c0e2826b759 571 SUPERFAMILY SSF54106 526 569 3.53E-11 T 11-10-2018 VSVS12_02908 4364fb94edd2375a7aa49c0e2826b759 571 Gene3D G3DSA:3.40.630.40 155 398 6.3E-66 T 11-10-2018 VSVS12_02908 4364fb94edd2375a7aa49c0e2826b759 571 Gene3D G3DSA:3.10.350.10 525 571 5.7E-16 T 11-10-2018 IPR036779 LysM domain superfamily VSVS12_03134 fe6f56801945720bf6b7f28138f71a56 305 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 3 296 49.506 T 11-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 VSVS12_03134 fe6f56801945720bf6b7f28138f71a56 305 Gene3D G3DSA:3.20.20.60 2 299 2.7E-96 T 11-10-2018 VSVS12_03134 fe6f56801945720bf6b7f28138f71a56 305 SUPERFAMILY SSF51621 5 298 1.84E-94 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VSVS12_03134 fe6f56801945720bf6b7f28138f71a56 305 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 6 295 5.4E-126 T 11-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 VSVS12_03134 fe6f56801945720bf6b7f28138f71a56 305 Pfam PF13714 Phosphoenolpyruvate phosphomutase 16 258 2.7E-46 T 11-10-2018 VSVS12_03134 fe6f56801945720bf6b7f28138f71a56 305 ProSitePatterns PS00161 Isocitrate lyase signature. 119 124 - T 11-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 VSVS12_00040 6645480e0d946aad6e978f2a2947aa3e 104 ProSitePatterns PS01344 Frataxin family signature. 48 62 - T 11-10-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VSVS12_00040 6645480e0d946aad6e978f2a2947aa3e 104 Hamap MF_00142 Iron-sulfur cluster assembly protein CyaY [cyaY]. 1 103 26.788 T 11-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VSVS12_00040 6645480e0d946aad6e978f2a2947aa3e 104 SUPERFAMILY SSF55387 1 103 3.31E-39 T 11-10-2018 VSVS12_00040 6645480e0d946aad6e978f2a2947aa3e 104 Gene3D G3DSA:3.30.920.10 1 103 3.9E-38 T 11-10-2018 IPR036524 Frataxin/CyaY superfamily GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VSVS12_00040 6645480e0d946aad6e978f2a2947aa3e 104 SMART SM01219 1 104 4.1E-54 T 11-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VSVS12_00040 6645480e0d946aad6e978f2a2947aa3e 104 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 103 8.0E-42 T 11-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VSVS12_00040 6645480e0d946aad6e978f2a2947aa3e 104 Pfam PF01491 Frataxin-like domain 1 100 6.0E-30 T 11-10-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VSVS12_02951 8a01d229192ddec23b04385d91b9d00e 256 Gene3D G3DSA:3.20.20.70 1 256 4.7E-99 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_02951 8a01d229192ddec23b04385d91b9d00e 256 SUPERFAMILY SSF51351 2 250 1.44E-88 T 11-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02951 8a01d229192ddec23b04385d91b9d00e 256 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 241 3.4E-77 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02951 8a01d229192ddec23b04385d91b9d00e 256 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 250 58.788 T 11-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02951 8a01d229192ddec23b04385d91b9d00e 256 ProSitePatterns PS00171 Triosephosphate isomerase active site. 167 177 - T 11-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02951 8a01d229192ddec23b04385d91b9d00e 256 Pfam PF00121 Triosephosphate isomerase 5 247 1.2E-86 T 11-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_01345 7eb480aa630fbd475ce2f2b442ac30fe 358 SUPERFAMILY SSF52343 124 255 1.31E-31 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VSVS12_01345 7eb480aa630fbd475ce2f2b442ac30fe 358 Gene3D G3DSA:3.40.50.80 124 254 1.5E-27 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VSVS12_01345 7eb480aa630fbd475ce2f2b442ac30fe 358 Pfam PF00175 Oxidoreductase NAD-binding domain 132 235 6.3E-11 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VSVS12_01345 7eb480aa630fbd475ce2f2b442ac30fe 358 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 307 315 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VSVS12_01345 7eb480aa630fbd475ce2f2b442ac30fe 358 Pfam PF00970 Oxidoreductase FAD-binding domain 44 114 5.1E-12 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 VSVS12_01345 7eb480aa630fbd475ce2f2b442ac30fe 358 Gene3D G3DSA:2.40.30.10 8 115 8.1E-23 T 11-10-2018 VSVS12_01345 7eb480aa630fbd475ce2f2b442ac30fe 358 SUPERFAMILY SSF63380 4 116 3.24E-25 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VSVS12_01345 7eb480aa630fbd475ce2f2b442ac30fe 358 SUPERFAMILY SSF54292 244 357 4.46E-25 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VSVS12_01345 7eb480aa630fbd475ce2f2b442ac30fe 358 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 281 348 3.1E-11 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VSVS12_01345 7eb480aa630fbd475ce2f2b442ac30fe 358 Gene3D G3DSA:3.10.20.30 255 357 6.0E-23 T 11-10-2018 IPR012675 Beta-grasp domain superfamily VSVS12_01700 71730834b4228822f693bb3bdf7a92fc 345 PIRSF PIRSF019574 2 345 4.4E-123 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VSVS12_01700 71730834b4228822f693bb3bdf7a92fc 345 Gene3D G3DSA:3.40.190.10 29 312 4.7E-120 T 11-10-2018 VSVS12_01700 71730834b4228822f693bb3bdf7a92fc 345 SUPERFAMILY SSF53850 24 342 1.73E-91 T 11-10-2018 VSVS12_01700 71730834b4228822f693bb3bdf7a92fc 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 290 316 2.2E-85 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VSVS12_01700 71730834b4228822f693bb3bdf7a92fc 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 30 46 2.2E-85 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VSVS12_01700 71730834b4228822f693bb3bdf7a92fc 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 146 160 2.2E-85 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VSVS12_01700 71730834b4228822f693bb3bdf7a92fc 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 89 102 2.2E-85 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VSVS12_01700 71730834b4228822f693bb3bdf7a92fc 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 46 67 2.2E-85 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VSVS12_01700 71730834b4228822f693bb3bdf7a92fc 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 164 183 2.2E-85 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VSVS12_01700 71730834b4228822f693bb3bdf7a92fc 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 245 264 2.2E-85 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VSVS12_01700 71730834b4228822f693bb3bdf7a92fc 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 73 87 2.2E-85 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VSVS12_01700 71730834b4228822f693bb3bdf7a92fc 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 120 136 2.2E-85 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VSVS12_01700 71730834b4228822f693bb3bdf7a92fc 345 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 201 220 2.2E-85 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VSVS12_01700 71730834b4228822f693bb3bdf7a92fc 345 Gene3D G3DSA:3.40.190.10 129 318 4.7E-120 T 11-10-2018 VSVS12_01700 71730834b4228822f693bb3bdf7a92fc 345 Pfam PF13416 Bacterial extracellular solute-binding protein 40 311 1.1E-41 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein VSVS12_00282 4c1be92bf8aabf8592362868779eb21f 144 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 142 4.4E-49 T 11-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 VSVS12_00282 4c1be92bf8aabf8592362868779eb21f 144 SUPERFAMILY SSF69500 2 143 4.58E-51 T 11-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily VSVS12_00282 4c1be92bf8aabf8592362868779eb21f 144 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 144 32.023 T 11-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 VSVS12_00282 4c1be92bf8aabf8592362868779eb21f 144 Gene3D G3DSA:3.50.80.10 1 144 1.2E-51 T 11-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily VSVS12_00282 4c1be92bf8aabf8592362868779eb21f 144 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 2 144 4.0E-61 T 11-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 VSVS12_01455 93920506d23afb12f3555c977e7e94f4 231 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 98 112 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VSVS12_01455 93920506d23afb12f3555c977e7e94f4 231 Pfam PF01479 S4 domain 1 33 1.4E-5 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_01455 93920506d23afb12f3555c977e7e94f4 231 Gene3D G3DSA:3.30.70.580 62 224 1.3E-52 T 11-10-2018 VSVS12_01455 93920506d23afb12f3555c977e7e94f4 231 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 65 221 3.8E-41 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VSVS12_01455 93920506d23afb12f3555c977e7e94f4 231 Gene3D G3DSA:3.10.290.10 1 61 3.1E-12 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VSVS12_01455 93920506d23afb12f3555c977e7e94f4 231 SMART SM00363 1 63 2.2E-7 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_01455 93920506d23afb12f3555c977e7e94f4 231 Gene3D G3DSA:3.30.70.1560 127 208 1.3E-52 T 11-10-2018 VSVS12_01455 93920506d23afb12f3555c977e7e94f4 231 SUPERFAMILY SSF55174 1 54 1.91E-10 T 11-10-2018 VSVS12_01455 93920506d23afb12f3555c977e7e94f4 231 Pfam PF00849 RNA pseudouridylate synthase 61 191 4.8E-16 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VSVS12_01455 93920506d23afb12f3555c977e7e94f4 231 SUPERFAMILY SSF55120 60 224 2.88E-40 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VSVS12_00473 da9093d8b2bba2fce953752f4c0df0a9 100 Gene3D G3DSA:3.30.70.330 1 100 9.8E-38 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily VSVS12_00473 da9093d8b2bba2fce953752f4c0df0a9 100 Pfam PF00276 Ribosomal protein L23 9 95 2.3E-31 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 VSVS12_00473 da9093d8b2bba2fce953752f4c0df0a9 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 11-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00473 da9093d8b2bba2fce953752f4c0df0a9 100 SUPERFAMILY SSF54189 6 97 5.4E-32 T 11-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00473 da9093d8b2bba2fce953752f4c0df0a9 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.345 T 11-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 VSVS12_03654 83c1613f92116194778c46a828171bc7 346 SUPERFAMILY SSF50129 5 178 3.96E-52 T 11-10-2018 IPR011032 GroES-like superfamily VSVS12_03654 83c1613f92116194778c46a828171bc7 346 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 8 345 5.7E-177 T 11-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 VSVS12_03654 83c1613f92116194778c46a828171bc7 346 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 67 81 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 VSVS12_03654 83c1613f92116194778c46a828171bc7 346 Pfam PF00107 Zinc-binding dehydrogenase 179 306 4.1E-27 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VSVS12_03654 83c1613f92116194778c46a828171bc7 346 Gene3D G3DSA:3.90.180.10 25 333 3.9E-115 T 11-10-2018 VSVS12_03654 83c1613f92116194778c46a828171bc7 346 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 139 1.5E-30 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VSVS12_03654 83c1613f92116194778c46a828171bc7 346 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 6 345 59.948 T 11-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 VSVS12_03654 83c1613f92116194778c46a828171bc7 346 SUPERFAMILY SSF51735 146 310 2.72E-36 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_03654 83c1613f92116194778c46a828171bc7 346 SMART SM00829 17 343 8.2E-5 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VSVS12_03654 83c1613f92116194778c46a828171bc7 346 Gene3D G3DSA:3.40.50.720 158 291 3.9E-115 T 11-10-2018 VSVS12_01235 305860b4bfda0c46ac16bae1ae5e6ead 198 PIRSF PIRSF006305 1 197 2.3E-47 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 VSVS12_01235 305860b4bfda0c46ac16bae1ae5e6ead 198 Pfam PF02545 Maf-like protein 5 191 5.1E-45 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 VSVS12_01235 305860b4bfda0c46ac16bae1ae5e6ead 198 TIGRFAM TIGR00172 maf: septum formation protein Maf 4 190 1.4E-57 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 VSVS12_01235 305860b4bfda0c46ac16bae1ae5e6ead 198 Hamap MF_00528 Septum formation protein Maf [maf]. 5 197 30.647 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 VSVS12_01235 305860b4bfda0c46ac16bae1ae5e6ead 198 SUPERFAMILY SSF52972 2 191 1.24E-57 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VSVS12_01235 305860b4bfda0c46ac16bae1ae5e6ead 198 Gene3D G3DSA:3.90.950.10 4 198 1.7E-61 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VSVS12_02383 3e2cd31e5c68f51383271413648a7475 378 Pfam PF01979 Amidohydrolase family 51 374 2.7E-37 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VSVS12_02383 3e2cd31e5c68f51383271413648a7475 378 PIRSF PIRSF038994 1 377 4.9E-119 T 11-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 VSVS12_02383 3e2cd31e5c68f51383271413648a7475 378 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 374 7.1E-158 T 11-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 VSVS12_02383 3e2cd31e5c68f51383271413648a7475 378 SUPERFAMILY SSF51338 1 53 3.17E-19 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VSVS12_02383 3e2cd31e5c68f51383271413648a7475 378 Gene3D G3DSA:3.20.20.140 55 341 3.1E-142 T 11-10-2018 VSVS12_02383 3e2cd31e5c68f51383271413648a7475 378 SUPERFAMILY SSF51556 54 347 3.66E-101 T 11-10-2018 IPR032466 Metal-dependent hydrolase VSVS12_02383 3e2cd31e5c68f51383271413648a7475 378 Gene3D G3DSA:2.30.40.10 6 373 3.1E-142 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VSVS12_01819 4273b821c08b2277a546778602919266 886 Gene3D G3DSA:3.90.199.10 33 520 1.9E-235 T 11-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 VSVS12_01819 4273b821c08b2277a546778602919266 886 SUPERFAMILY SSF101904 532 850 4.45E-113 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal VSVS12_01819 4273b821c08b2277a546778602919266 886 Gene3D G3DSA:3.30.1360.40 236 332 1.9E-235 T 11-10-2018 VSVS12_01819 4273b821c08b2277a546778602919266 886 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 838 0.0 T 11-10-2018 VSVS12_01819 4273b821c08b2277a546778602919266 886 SUPERFAMILY SSF56719 30 520 4.97E-186 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VSVS12_01819 4273b821c08b2277a546778602919266 886 SMART SM00434 11 498 4.7E-299 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VSVS12_01819 4273b821c08b2277a546778602919266 886 Gene3D G3DSA:1.10.268.10 369 492 1.9E-235 T 11-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VSVS12_01819 4273b821c08b2277a546778602919266 886 Gene3D G3DSA:2.120.10.90 534 840 1.2E-126 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal VSVS12_01819 4273b821c08b2277a546778602919266 886 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 840 24.562 T 11-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VSVS12_01819 4273b821c08b2277a546778602919266 886 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 505 6.7E-156 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VSVS12_01819 4273b821c08b2277a546778602919266 886 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 792 838 6.2E-11 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VSVS12_01819 4273b821c08b2277a546778602919266 886 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 742 788 1.2E-12 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VSVS12_01819 4273b821c08b2277a546778602919266 886 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 736 4.1E-15 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VSVS12_01819 4273b821c08b2277a546778602919266 886 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 537 583 4.0E-7 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VSVS12_01819 4273b821c08b2277a546778602919266 886 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 644 687 1.3E-8 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VSVS12_01819 4273b821c08b2277a546778602919266 886 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 587 637 4.7E-11 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VSVS12_01637 721da0ccd1ff546d09f1fb636a275914 641 Pfam PF00990 Diguanylate cyclase, GGDEF domain 481 635 2.7E-30 T 11-10-2018 IPR000160 GGDEF domain VSVS12_01637 721da0ccd1ff546d09f1fb636a275914 641 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 479 636 2.8E-31 T 11-10-2018 IPR000160 GGDEF domain VSVS12_01637 721da0ccd1ff546d09f1fb636a275914 641 Gene3D G3DSA:3.30.70.270 481 640 7.4E-36 T 11-10-2018 VSVS12_01637 721da0ccd1ff546d09f1fb636a275914 641 Gene3D G3DSA:1.25.40.10 95 291 2.5E-19 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_01637 721da0ccd1ff546d09f1fb636a275914 641 Gene3D G3DSA:1.25.40.10 292 454 1.2E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_01637 721da0ccd1ff546d09f1fb636a275914 641 SUPERFAMILY SSF55073 483 637 3.84E-30 T 11-10-2018 IPR029787 Nucleotide cyclase VSVS12_01637 721da0ccd1ff546d09f1fb636a275914 641 SMART SM00028 211 244 20.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_01637 721da0ccd1ff546d09f1fb636a275914 641 SMART SM00028 331 364 11.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_01637 721da0ccd1ff546d09f1fb636a275914 641 SMART SM00028 174 207 4.8 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_01637 721da0ccd1ff546d09f1fb636a275914 641 SMART SM00028 251 284 0.47 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_01637 721da0ccd1ff546d09f1fb636a275914 641 SMART SM00028 291 324 120.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_01637 721da0ccd1ff546d09f1fb636a275914 641 SMART SM00267 468 639 1.5E-26 T 11-10-2018 IPR000160 GGDEF domain VSVS12_01637 721da0ccd1ff546d09f1fb636a275914 641 SUPERFAMILY SSF48452 175 283 2.59E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_01637 721da0ccd1ff546d09f1fb636a275914 641 SUPERFAMILY SSF48452 249 406 1.67E-17 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_01637 721da0ccd1ff546d09f1fb636a275914 641 Pfam PF13181 Tetratricopeptide repeat 213 241 0.043 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_01121 ed192377042af3825fe5020103ff00dd 220 Gene3D G3DSA:3.30.750.120 1 112 1.5E-33 T 11-10-2018 IPR038061 MinC, Proteobacteria, N-terminal domain superfamily VSVS12_01121 ed192377042af3825fe5020103ff00dd 220 SUPERFAMILY SSF63848 113 216 3.92E-30 T 11-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 VSVS12_01121 ed192377042af3825fe5020103ff00dd 220 Gene3D G3DSA:2.160.20.70 113 219 1.2E-29 T 11-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 VSVS12_01121 ed192377042af3825fe5020103ff00dd 220 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 4 219 27.989 T 11-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 VSVS12_01121 ed192377042af3825fe5020103ff00dd 220 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 102 7.5E-30 T 11-10-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 VSVS12_01121 ed192377042af3825fe5020103ff00dd 220 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 5 216 2.0E-72 T 11-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 VSVS12_01121 ed192377042af3825fe5020103ff00dd 220 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 115 215 1.6E-30 T 11-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 VSVS12_02978 a61b8a32ff25b531533b70c9e8c5e73c 650 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 644 0.0 T 11-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 VSVS12_02978 a61b8a32ff25b531533b70c9e8c5e73c 650 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 11-10-2018 IPR020845 AMP-binding, conserved site VSVS12_02978 a61b8a32ff25b531533b70c9e8c5e73c 650 Gene3D G3DSA:3.40.50.12780 50 516 3.8E-102 T 11-10-2018 VSVS12_02978 a61b8a32ff25b531533b70c9e8c5e73c 650 SUPERFAMILY SSF56801 11 644 6.02E-180 T 11-10-2018 VSVS12_02978 a61b8a32ff25b531533b70c9e8c5e73c 650 Pfam PF13193 AMP-binding enzyme C-terminal domain 532 610 2.4E-25 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VSVS12_02978 a61b8a32ff25b531533b70c9e8c5e73c 650 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 3.5E-20 T 11-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 VSVS12_02978 a61b8a32ff25b531533b70c9e8c5e73c 650 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 646 52.417 T 11-10-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 VSVS12_02978 a61b8a32ff25b531533b70c9e8c5e73c 650 Pfam PF00501 AMP-binding enzyme 84 523 6.4E-90 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VSVS12_02978 a61b8a32ff25b531533b70c9e8c5e73c 650 Gene3D G3DSA:3.30.300.30 519 650 7.0E-31 T 11-10-2018 VSVS12_03798 c39f1947794d5ca4e2650b9208620d34 567 SUPERFAMILY SSF56176 4 268 2.51E-63 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VSVS12_03798 c39f1947794d5ca4e2650b9208620d34 567 Gene3D G3DSA:3.30.1370.20 431 515 2.1E-39 T 11-10-2018 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 VSVS12_03798 c39f1947794d5ca4e2650b9208620d34 567 SUPERFAMILY SSF55103 271 561 7.85E-107 T 11-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 VSVS12_03798 c39f1947794d5ca4e2650b9208620d34 567 Pfam PF01565 FAD binding domain 42 160 1.7E-7 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 VSVS12_03798 c39f1947794d5ca4e2650b9208620d34 567 Gene3D G3DSA:3.30.43.10 2 97 2.4E-11 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 VSVS12_03798 c39f1947794d5ca4e2650b9208620d34 567 Gene3D G3DSA:3.30.465.10 100 263 1.5E-71 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 VSVS12_03798 c39f1947794d5ca4e2650b9208620d34 567 Pfam PF09330 D-lactate dehydrogenase, membrane binding 274 561 6.3E-137 T 11-10-2018 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 VSVS12_03798 c39f1947794d5ca4e2650b9208620d34 567 Hamap MF_02092 Quinone-dependent D-lactate dehydrogenase [dld]. 4 564 54.55 T 11-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 VSVS12_03798 c39f1947794d5ca4e2650b9208620d34 567 Gene3D G3DSA:3.30.70.610 264 345 2.7E-18 T 11-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 VSVS12_03798 c39f1947794d5ca4e2650b9208620d34 567 Gene3D G3DSA:3.30.70.610 354 430 1.2E-16 T 11-10-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 VSVS12_03798 c39f1947794d5ca4e2650b9208620d34 567 PIRSF PIRSF000101 1 566 5.5E-284 T 11-10-2018 IPR012256 D-lactate dehydrogenase GO:0005887|GO:0016901|GO:0019516|GO:0022904|GO:0050660 KEGG: 00620+1.1.5.12|MetaCyc: PWY-5386|MetaCyc: PWY-7425 VSVS12_00155 62980baaf504a548fe948bae3977cafc 384 SUPERFAMILY SSF103473 2 374 3.14E-57 T 11-10-2018 IPR036259 MFS transporter superfamily VSVS12_00155 62980baaf504a548fe948bae3977cafc 384 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 2 363 6.6E-65 T 11-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 VSVS12_00155 62980baaf504a548fe948bae3977cafc 384 ProSitePatterns PS00216 Sugar transport proteins signature 1. 54 70 - T 11-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 VSVS12_00155 62980baaf504a548fe948bae3977cafc 384 Gene3D G3DSA:1.20.1720.10 1 374 2.9E-90 T 11-10-2018 VSVS12_00155 62980baaf504a548fe948bae3977cafc 384 Pfam PF07690 Major Facilitator Superfamily 5 341 9.1E-45 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VSVS12_00754 ea98cca4dc3a119fc8e243f406e05ff0 283 SUPERFAMILY SSF55831 2 283 1.96E-90 T 11-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VSVS12_00754 ea98cca4dc3a119fc8e243f406e05ff0 283 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 283 4.5E-43 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VSVS12_00754 ea98cca4dc3a119fc8e243f406e05ff0 283 ProSitePatterns PS00091 Thymidylate synthase active site. 140 168 - T 11-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VSVS12_00754 ea98cca4dc3a119fc8e243f406e05ff0 283 PRINTS PR00108 Thymidylate synthase family signature 211 228 6.1E-14 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VSVS12_00754 ea98cca4dc3a119fc8e243f406e05ff0 283 PRINTS PR00108 Thymidylate synthase family signature 173 199 6.1E-14 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VSVS12_00754 ea98cca4dc3a119fc8e243f406e05ff0 283 PRINTS PR00108 Thymidylate synthase family signature 44 65 6.1E-14 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VSVS12_00754 ea98cca4dc3a119fc8e243f406e05ff0 283 PRINTS PR00108 Thymidylate synthase family signature 129 148 6.1E-14 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VSVS12_00754 ea98cca4dc3a119fc8e243f406e05ff0 283 Hamap MF_00008 Thymidylate synthase [thyA]. 1 283 32.265 T 11-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VSVS12_00754 ea98cca4dc3a119fc8e243f406e05ff0 283 Gene3D G3DSA:3.30.572.10 1 283 9.5E-80 T 11-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VSVS12_00754 ea98cca4dc3a119fc8e243f406e05ff0 283 Pfam PF00303 Thymidylate synthase 2 283 1.1E-73 T 11-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 VSVS12_00701 68a7056a2f1f0d8ee793ad3e1b38946b 802 Gene3D G3DSA:2.60.420.10 721 801 2.2E-29 T 11-10-2018 VSVS12_00701 68a7056a2f1f0d8ee793ad3e1b38946b 802 Pfam PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain 296 728 7.6E-206 T 11-10-2018 IPR033432 Glycosyl hydrolase 36, catalytic domain VSVS12_00701 68a7056a2f1f0d8ee793ad3e1b38946b 802 SUPERFAMILY SSF48208 274 801 5.1E-109 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 VSVS12_00701 68a7056a2f1f0d8ee793ad3e1b38946b 802 Gene3D G3DSA:1.50.10.10 311 720 3.8E-132 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 VSVS12_00701 68a7056a2f1f0d8ee793ad3e1b38946b 802 Pfam PF06165 Glycosyltransferase family 36 21 267 9.6E-84 T 11-10-2018 IPR010383 Glycosyl hydrolase 94 VSVS12_00701 68a7056a2f1f0d8ee793ad3e1b38946b 802 SUPERFAMILY SSF74650 1 269 2.98E-82 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VSVS12_00701 68a7056a2f1f0d8ee793ad3e1b38946b 802 Gene3D G3DSA:2.70.98.40 1 302 2.5E-116 T 11-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily VSVS12_00701 68a7056a2f1f0d8ee793ad3e1b38946b 802 SMART SM01068 1 63 1.2E-20 T 11-10-2018 IPR009342 Putative carbohydrate binding domain VSVS12_02645 7f04de22a1b82d21b0aee9ed5f2f656b 127 Gene3D G3DSA:3.90.470.20 1 126 8.7E-40 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 VSVS12_02645 7f04de22a1b82d21b0aee9ed5f2f656b 127 SUPERFAMILY SSF56214 3 125 3.01E-32 T 11-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 VSVS12_02645 7f04de22a1b82d21b0aee9ed5f2f656b 127 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 121 9.1E-23 T 11-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 VSVS12_02645 7f04de22a1b82d21b0aee9ed5f2f656b 127 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 126 26.819 T 11-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 VSVS12_02645 7f04de22a1b82d21b0aee9ed5f2f656b 127 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 126 1.7E-43 T 11-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 VSVS12_02645 7f04de22a1b82d21b0aee9ed5f2f656b 127 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 87 1.0E-32 T 11-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 VSVS12_02645 7f04de22a1b82d21b0aee9ed5f2f656b 127 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 125 5.2E-32 T 11-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 VSVS12_01773 8131e1cfb2df8048e999de83ab4ffcc1 355 Pfam PF13692 Glycosyl transferases group 1 181 301 1.4E-18 T 11-10-2018 VSVS12_01773 8131e1cfb2df8048e999de83ab4ffcc1 355 SUPERFAMILY SSF53756 13 345 1.84E-50 T 11-10-2018 VSVS12_01773 8131e1cfb2df8048e999de83ab4ffcc1 355 Pfam PF13579 Glycosyl transferase 4-like domain 19 159 1.9E-14 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 VSVS12_01773 8131e1cfb2df8048e999de83ab4ffcc1 355 Gene3D G3DSA:3.40.50.2000 178 327 2.0E-24 T 11-10-2018 VSVS12_01773 8131e1cfb2df8048e999de83ab4ffcc1 355 Gene3D G3DSA:3.40.50.2000 8 177 2.2E-15 T 11-10-2018 VSVS12_01291 af1ff0e540fb45c2166f0b05e9dd8401 292 Gene3D G3DSA:1.10.10.10 6 92 1.6E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_01291 af1ff0e540fb45c2166f0b05e9dd8401 292 SUPERFAMILY SSF53850 91 291 1.5E-27 T 11-10-2018 VSVS12_01291 af1ff0e540fb45c2166f0b05e9dd8401 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.9E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_01291 af1ff0e540fb45c2166f0b05e9dd8401 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.9E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_01291 af1ff0e540fb45c2166f0b05e9dd8401 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.9E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_01291 af1ff0e540fb45c2166f0b05e9dd8401 292 SUPERFAMILY SSF46785 8 80 1.57E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_01291 af1ff0e540fb45c2166f0b05e9dd8401 292 Pfam PF03466 LysR substrate binding domain 91 291 5.7E-25 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_01291 af1ff0e540fb45c2166f0b05e9dd8401 292 Gene3D G3DSA:3.40.190.10 162 261 6.5E-41 T 11-10-2018 VSVS12_01291 af1ff0e540fb45c2166f0b05e9dd8401 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.4E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_01291 af1ff0e540fb45c2166f0b05e9dd8401 292 Gene3D G3DSA:3.40.190.10 103 287 6.5E-41 T 11-10-2018 VSVS12_03809 b2051c7268c274bc90d814754c075f73 523 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 73 520 3.4E-139 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VSVS12_03809 b2051c7268c274bc90d814754c075f73 523 ProSitePatterns PS01303 BCCT family of transporters signature. 336 345 - T 11-10-2018 IPR018093 BCCT transporter, conserved site VSVS12_03809 b2051c7268c274bc90d814754c075f73 523 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 33 520 2.7E-175 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VSVS12_01359 a776196b1759fae44fe42a9412b63cfe 1154 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 148 1082 0.0 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 VSVS12_01359 a776196b1759fae44fe42a9412b63cfe 1154 SMART SM00982 1008 1108 3.5E-48 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 VSVS12_01359 a776196b1759fae44fe42a9412b63cfe 1154 SMART SM00487 600 790 1.0E-32 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VSVS12_01359 a776196b1759fae44fe42a9412b63cfe 1154 Gene3D G3DSA:3.90.1150.50 1004 1150 1.2E-45 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain VSVS12_01359 a776196b1759fae44fe42a9412b63cfe 1154 SUPERFAMILY SSF52540 782 990 4.09E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01359 a776196b1759fae44fe42a9412b63cfe 1154 Pfam PF00270 DEAD/DEAH box helicase 605 765 8.4E-20 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VSVS12_01359 a776196b1759fae44fe42a9412b63cfe 1154 Pfam PF00271 Helicase conserved C-terminal domain 806 909 1.2E-16 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_01359 a776196b1759fae44fe42a9412b63cfe 1154 Pfam PF02559 CarD-like/TRCF domain 480 575 4.5E-25 T 11-10-2018 IPR003711 CarD-like/TRCF domain VSVS12_01359 a776196b1759fae44fe42a9412b63cfe 1154 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 30 1109 28.023 T 11-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 VSVS12_01359 a776196b1759fae44fe42a9412b63cfe 1154 Gene3D G3DSA:3.40.50.11140 356 453 7.3E-34 T 11-10-2018 VSVS12_01359 a776196b1759fae44fe42a9412b63cfe 1154 SUPERFAMILY SSF52540 352 466 7.57E-29 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01359 a776196b1759fae44fe42a9412b63cfe 1154 Gene3D G3DSA:3.40.50.11180 26 333 5.1E-123 T 11-10-2018 VSVS12_01359 a776196b1759fae44fe42a9412b63cfe 1154 SUPERFAMILY SSF52540 18 342 1.29E-101 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01359 a776196b1759fae44fe42a9412b63cfe 1154 SUPERFAMILY SSF143517 995 1146 6.93E-44 T 11-10-2018 IPR037235 TRCF-like, C-terminal domain VSVS12_01359 a776196b1759fae44fe42a9412b63cfe 1154 Gene3D G3DSA:3.40.50.300 542 781 8.7E-236 T 11-10-2018 VSVS12_01359 a776196b1759fae44fe42a9412b63cfe 1154 SUPERFAMILY SSF141259 470 548 1.83E-24 T 11-10-2018 IPR036101 CarD-like/TRCF domain superfamily VSVS12_01359 a776196b1759fae44fe42a9412b63cfe 1154 Gene3D G3DSA:3.30.2060.10 130 215 5.1E-123 T 11-10-2018 VSVS12_01359 a776196b1759fae44fe42a9412b63cfe 1154 SMART SM00490 826 910 3.7E-19 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_01359 a776196b1759fae44fe42a9412b63cfe 1154 Gene3D G3DSA:3.40.50.300 478 989 8.7E-236 T 11-10-2018 VSVS12_01359 a776196b1759fae44fe42a9412b63cfe 1154 SMART SM01058 479 576 7.5E-52 T 11-10-2018 IPR003711 CarD-like/TRCF domain VSVS12_01359 a776196b1759fae44fe42a9412b63cfe 1154 Gene3D G3DSA:2.30.30.840 483 541 8.7E-236 T 11-10-2018 VSVS12_01359 a776196b1759fae44fe42a9412b63cfe 1154 Pfam PF03461 TRCF domain 1010 1101 8.7E-29 T 11-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 VSVS12_01359 a776196b1759fae44fe42a9412b63cfe 1154 SUPERFAMILY SSF52540 523 783 6.15E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00847 8dadcf0d24607e9eccaa3cd4769caada 154 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 153 37.307 T 11-10-2018 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22 VSVS12_00847 8dadcf0d24607e9eccaa3cd4769caada 154 Gene3D G3DSA:3.40.50.2020 1 152 4.4E-41 T 11-10-2018 VSVS12_00847 8dadcf0d24607e9eccaa3cd4769caada 154 SUPERFAMILY SSF53271 5 147 4.97E-28 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like VSVS12_00847 8dadcf0d24607e9eccaa3cd4769caada 154 Pfam PF00156 Phosphoribosyl transferase domain 28 145 1.5E-12 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 VSVS12_04433 afc17a156915fcbb5fbb7e263a494b13 100 TIGRFAM TIGR01690 ICE_RAQPRD: integrative conjugative element protein, RAQPRD family 4 95 1.7E-21 T 11-10-2018 IPR019110 Uncharacterised protein family, RAQPRD VSVS12_04433 afc17a156915fcbb5fbb7e263a494b13 100 Pfam PF09686 Plasmid protein of unknown function (Plasmid_RAQPRD) 23 94 1.1E-20 T 11-10-2018 IPR019110 Uncharacterised protein family, RAQPRD VSVS12_01403 f98a6283adcdc379e970739c01a31ffb 150 Gene3D G3DSA:1.10.3680.10 3 139 1.0E-20 T 11-10-2018 IPR029024 TerB-like VSVS12_01403 f98a6283adcdc379e970739c01a31ffb 150 SUPERFAMILY SSF158682 3 146 3.66E-30 T 11-10-2018 IPR029024 TerB-like VSVS12_01403 f98a6283adcdc379e970739c01a31ffb 150 Pfam PF05099 Tellurite resistance protein TerB 7 142 1.2E-39 T 11-10-2018 IPR007791 Co-chaperone DjlA, N-terminal VSVS12_04394 0dbaadf8171cf5e73d7640cc8fe7f63a 352 Gene3D G3DSA:3.30.420.40 82 206 1.9E-33 T 11-10-2018 VSVS12_04394 0dbaadf8171cf5e73d7640cc8fe7f63a 352 SUPERFAMILY SSF46785 13 73 1.92E-10 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_04394 0dbaadf8171cf5e73d7640cc8fe7f63a 352 Pfam PF00480 ROK family 95 242 9.3E-17 T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VSVS12_04394 0dbaadf8171cf5e73d7640cc8fe7f63a 352 Gene3D G3DSA:1.10.10.10 12 77 1.8E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_04394 0dbaadf8171cf5e73d7640cc8fe7f63a 352 Gene3D G3DSA:3.30.420.40 252 346 5.5E-6 T 11-10-2018 VSVS12_04394 0dbaadf8171cf5e73d7640cc8fe7f63a 352 SUPERFAMILY SSF53067 83 346 4.4E-27 T 11-10-2018 VSVS12_04394 0dbaadf8171cf5e73d7640cc8fe7f63a 352 Gene3D G3DSA:3.30.420.40 207 243 1.9E-33 T 11-10-2018 VSVS12_04520 0dbaadf8171cf5e73d7640cc8fe7f63a 352 Gene3D G3DSA:3.30.420.40 82 206 1.9E-33 T 11-10-2018 VSVS12_04520 0dbaadf8171cf5e73d7640cc8fe7f63a 352 SUPERFAMILY SSF46785 13 73 1.92E-10 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_04520 0dbaadf8171cf5e73d7640cc8fe7f63a 352 Pfam PF00480 ROK family 95 242 9.3E-17 T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VSVS12_04520 0dbaadf8171cf5e73d7640cc8fe7f63a 352 Gene3D G3DSA:1.10.10.10 12 77 1.8E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_04520 0dbaadf8171cf5e73d7640cc8fe7f63a 352 Gene3D G3DSA:3.30.420.40 252 346 5.5E-6 T 11-10-2018 VSVS12_04520 0dbaadf8171cf5e73d7640cc8fe7f63a 352 SUPERFAMILY SSF53067 83 346 4.4E-27 T 11-10-2018 VSVS12_04520 0dbaadf8171cf5e73d7640cc8fe7f63a 352 Gene3D G3DSA:3.30.420.40 207 243 1.9E-33 T 11-10-2018 VSVS12_01621 af607e573c6e778219bb000d08838e53 164 Gene3D G3DSA:3.30.2010.10 66 163 1.6E-7 T 11-10-2018 VSVS12_01621 af607e573c6e778219bb000d08838e53 164 Pfam PF01863 Protein of unknown function DUF45 94 150 3.3E-11 T 11-10-2018 IPR002725 Protein of unknown function DUF45 VSVS12_02182 6d46be955e0b27f16a3fa1d1ccb98988 445 SUPERFAMILY SSF140570 124 286 3.53E-76 T 11-10-2018 IPR036141 MukF, middle domain superfamily VSVS12_02182 6d46be955e0b27f16a3fa1d1ccb98988 445 Pfam PF03882 MukF winged-helix domain 10 122 6.3E-53 T 11-10-2018 IPR033439 Chromosome partition protein MukF, winged-helix domain VSVS12_02182 6d46be955e0b27f16a3fa1d1ccb98988 445 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 6 445 54.523 T 11-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 VSVS12_02182 6d46be955e0b27f16a3fa1d1ccb98988 445 Gene3D G3DSA:1.10.10.10 29 123 5.5E-45 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_02182 6d46be955e0b27f16a3fa1d1ccb98988 445 PIRSF PIRSF018282 1 445 7.6E-248 T 11-10-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 VSVS12_02182 6d46be955e0b27f16a3fa1d1ccb98988 445 Pfam PF17192 MukF middle domain 126 286 3.3E-78 T 11-10-2018 IPR033440 Chromosome partition protein MukF, middle domain VSVS12_02182 6d46be955e0b27f16a3fa1d1ccb98988 445 SUPERFAMILY SSF46785 13 123 2.31E-43 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_02182 6d46be955e0b27f16a3fa1d1ccb98988 445 Pfam PF17193 MukF C-terminal domain 288 445 1.9E-77 T 11-10-2018 IPR033441 Chromosome partition protein MukF, C-terminal domain VSVS12_02182 6d46be955e0b27f16a3fa1d1ccb98988 445 Gene3D G3DSA:1.20.58.590 124 316 3.3E-79 T 11-10-2018 IPR036141 MukF, middle domain superfamily VSVS12_02182 6d46be955e0b27f16a3fa1d1ccb98988 445 Gene3D G3DSA:1.10.225.40 358 445 3.3E-38 T 11-10-2018 IPR038198 MukF, C-terminal domain superfamily VSVS12_01335 a9cf38dc12f3174dab7295e6164003cd 398 PIRSF PIRSF000722 1 397 8.9E-146 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VSVS12_01335 a9cf38dc12f3174dab7295e6164003cd 398 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 202 219 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VSVS12_01335 a9cf38dc12f3174dab7295e6164003cd 398 PRINTS PR00471 Acetate kinase family signature 172 185 7.4E-45 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VSVS12_01335 a9cf38dc12f3174dab7295e6164003cd 398 PRINTS PR00471 Acetate kinase family signature 377 389 7.4E-45 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VSVS12_01335 a9cf38dc12f3174dab7295e6164003cd 398 PRINTS PR00471 Acetate kinase family signature 298 311 7.4E-45 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VSVS12_01335 a9cf38dc12f3174dab7295e6164003cd 398 PRINTS PR00471 Acetate kinase family signature 321 337 7.4E-45 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VSVS12_01335 a9cf38dc12f3174dab7295e6164003cd 398 PRINTS PR00471 Acetate kinase family signature 5 16 7.4E-45 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VSVS12_01335 a9cf38dc12f3174dab7295e6164003cd 398 PRINTS PR00471 Acetate kinase family signature 202 223 7.4E-45 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VSVS12_01335 a9cf38dc12f3174dab7295e6164003cd 398 Pfam PF00871 Acetokinase family 5 390 2.9E-163 T 11-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VSVS12_01335 a9cf38dc12f3174dab7295e6164003cd 398 SUPERFAMILY SSF53067 3 195 1.51E-62 T 11-10-2018 VSVS12_01335 a9cf38dc12f3174dab7295e6164003cd 398 Gene3D G3DSA:3.30.420.40 2 194 5.1E-71 T 11-10-2018 VSVS12_01335 a9cf38dc12f3174dab7295e6164003cd 398 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 11-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VSVS12_01335 a9cf38dc12f3174dab7295e6164003cd 398 TIGRFAM TIGR00016 ackA: acetate kinase 2 396 6.1E-170 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VSVS12_01335 a9cf38dc12f3174dab7295e6164003cd 398 Hamap MF_00020 Acetate kinase [ackA]. 1 398 186.204 T 11-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 VSVS12_01335 a9cf38dc12f3174dab7295e6164003cd 398 Gene3D G3DSA:3.30.420.40 195 397 9.9E-83 T 11-10-2018 VSVS12_01335 a9cf38dc12f3174dab7295e6164003cd 398 SUPERFAMILY SSF53067 157 395 1.69E-84 T 11-10-2018 VSVS12_00097 e7773bb1a8e99fbe369a9ac74f3eff99 121 Gene3D G3DSA:1.10.3830.10 3 120 4.2E-39 T 11-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 VSVS12_00097 e7773bb1a8e99fbe369a9ac74f3eff99 121 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 70 81 - T 11-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 VSVS12_00097 e7773bb1a8e99fbe369a9ac74f3eff99 121 Pfam PF01219 Prokaryotic diacylglycerol kinase 16 116 2.2E-33 T 11-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 VSVS12_04557 b38f1a958eebb37f5b6a85da61c25ec3 205 Pfam PF00239 Resolvase, N terminal domain 4 143 2.8E-28 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VSVS12_04557 b38f1a958eebb37f5b6a85da61c25ec3 205 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 VSVS12_04557 b38f1a958eebb37f5b6a85da61c25ec3 205 Gene3D G3DSA:3.40.50.1390 2 152 2.5E-27 T 11-10-2018 VSVS12_04557 b38f1a958eebb37f5b6a85da61c25ec3 205 SUPERFAMILY SSF53041 2 144 9.16E-29 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 VSVS12_04557 b38f1a958eebb37f5b6a85da61c25ec3 205 SMART SM00857 3 145 3.8E-33 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VSVS12_01794 c452e9f58e0694757637ee3f79fc3042 218 Pfam PF10881 Protein of unknown function (DUF2726) 38 159 2.9E-35 T 11-10-2018 IPR024402 Domain of unknown function DUF2726 VSVS12_01794 c452e9f58e0694757637ee3f79fc3042 218 PIRSF PIRSF028063 1 218 1.5E-112 T 11-10-2018 IPR014538 Uncharacterised conserved protein, topoisomerase zinc finger VSVS12_03288 d690847bbd58bc8ae928c52792077ead 177 Gene3D G3DSA:3.40.430.10 2 174 2.1E-49 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 VSVS12_03288 d690847bbd58bc8ae928c52792077ead 177 Pfam PF01872 RibD C-terminal domain 4 164 7.6E-19 T 11-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 VSVS12_03288 d690847bbd58bc8ae928c52792077ead 177 SUPERFAMILY SSF53597 4 174 7.85E-33 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 VSVS12_04556 97ae72d8e0be45126061a3a59ccb0ef7 180 Gene3D G3DSA:1.10.10.60 139 180 3.7E-8 T 11-10-2018 VSVS12_04556 97ae72d8e0be45126061a3a59ccb0ef7 180 SUPERFAMILY SSF46689 146 179 5.73E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_04556 97ae72d8e0be45126061a3a59ccb0ef7 180 Pfam PF02796 Helix-turn-helix domain of resolvase 147 178 9.4E-7 T 11-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 VSVS12_04556 97ae72d8e0be45126061a3a59ccb0ef7 180 SUPERFAMILY SSF53041 1 137 6.93E-38 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 VSVS12_04556 97ae72d8e0be45126061a3a59ccb0ef7 180 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 VSVS12_04556 97ae72d8e0be45126061a3a59ccb0ef7 180 SMART SM00857 2 137 1.6E-46 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VSVS12_04556 97ae72d8e0be45126061a3a59ccb0ef7 180 Gene3D G3DSA:3.40.50.1390 1 125 7.0E-39 T 11-10-2018 VSVS12_04556 97ae72d8e0be45126061a3a59ccb0ef7 180 Pfam PF00239 Resolvase, N terminal domain 3 137 2.6E-37 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VSVS12_00275 3fad065e71daf11096033231bb1e7e13 467 SUPERFAMILY SSF52172 2 187 1.04E-42 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_00275 3fad065e71daf11096033231bb1e7e13 467 SUPERFAMILY SSF52540 141 385 2.47E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00275 3fad065e71daf11096033231bb1e7e13 467 Gene3D G3DSA:1.10.10.60 381 467 1.2E-25 T 11-10-2018 VSVS12_00275 3fad065e71daf11096033231bb1e7e13 467 Gene3D G3DSA:1.10.8.60 313 380 9.9E-17 T 11-10-2018 VSVS12_00275 3fad065e71daf11096033231bb1e7e13 467 Pfam PF02954 Bacterial regulatory protein, Fis family 426 466 7.5E-16 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VSVS12_00275 3fad065e71daf11096033231bb1e7e13 467 SMART SM00382 162 305 1.5E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_00275 3fad065e71daf11096033231bb1e7e13 467 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VSVS12_00275 3fad065e71daf11096033231bb1e7e13 467 Pfam PF00158 Sigma-54 interaction domain 142 309 9.2E-71 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VSVS12_00275 3fad065e71daf11096033231bb1e7e13 467 Gene3D G3DSA:3.40.50.300 126 312 4.0E-67 T 11-10-2018 VSVS12_00275 3fad065e71daf11096033231bb1e7e13 467 Pfam PF00072 Response regulator receiver domain 6 115 2.5E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_00275 3fad065e71daf11096033231bb1e7e13 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 449 3.1E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VSVS12_00275 3fad065e71daf11096033231bb1e7e13 467 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 467 3.1E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VSVS12_00275 3fad065e71daf11096033231bb1e7e13 467 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VSVS12_00275 3fad065e71daf11096033231bb1e7e13 467 SUPERFAMILY SSF46689 382 466 1.08E-19 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_00275 3fad065e71daf11096033231bb1e7e13 467 Gene3D G3DSA:3.40.50.2300 1 124 6.3E-40 T 11-10-2018 VSVS12_00275 3fad065e71daf11096033231bb1e7e13 467 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 466 6.5E-241 T 11-10-2018 IPR010114 DNA-binding transcriptional regulator NtrC GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 VSVS12_00275 3fad065e71daf11096033231bb1e7e13 467 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 166 179 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VSVS12_00275 3fad065e71daf11096033231bb1e7e13 467 SMART SM00448 4 115 3.1E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_04533 e9fb628a0a129920c14a35c9a8512142 192 Pfam PF08775 ParB family 67 188 5.2E-33 T 11-10-2018 IPR014884 ParB protein family, C-terminal VSVS12_04533 e9fb628a0a129920c14a35c9a8512142 192 Gene3D G3DSA:1.10.10.2830 14 133 8.2E-35 T 11-10-2018 VSVS12_04533 e9fb628a0a129920c14a35c9a8512142 192 Pfam PF13412 Winged helix-turn-helix DNA-binding 27 55 2.1E-6 T 11-10-2018 VSVS12_03924 1d49f7772aa091a533199883b171e037 481 Gene3D G3DSA:3.10.580.10 305 466 1.5E-19 T 11-10-2018 VSVS12_03924 1d49f7772aa091a533199883b171e037 481 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 27 280 9.1E-75 T 11-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 VSVS12_03924 1d49f7772aa091a533199883b171e037 481 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 84 93 - T 11-10-2018 IPR024002 Formate/nitrite transporter, conserved site VSVS12_03924 1d49f7772aa091a533199883b171e037 481 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 169 179 - T 11-10-2018 IPR024002 Formate/nitrite transporter, conserved site VSVS12_03924 1d49f7772aa091a533199883b171e037 481 Pfam PF00571 CBS domain 312 364 9.6E-7 T 11-10-2018 IPR000644 CBS domain VSVS12_03924 1d49f7772aa091a533199883b171e037 481 Gene3D G3DSA:1.20.1080.10 3 269 1.1E-86 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VSVS12_03924 1d49f7772aa091a533199883b171e037 481 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 15 280 4.4E-112 T 11-10-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 VSVS12_03924 1d49f7772aa091a533199883b171e037 481 SUPERFAMILY SSF54631 309 464 5.11E-19 T 11-10-2018 VSVS12_03924 1d49f7772aa091a533199883b171e037 481 Pfam PF01226 Formate/nitrite transporter 16 276 1.6E-70 T 11-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 VSVS12_00331 7eef245884294409d65d9effdc7d6ded 56 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 6 54 14.454 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00331 7eef245884294409d65d9effdc7d6ded 56 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 56 2.6E-26 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00331 7eef245884294409d65d9effdc7d6ded 56 SUPERFAMILY SSF57829 3 54 1.34E-18 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 VSVS12_00331 7eef245884294409d65d9effdc7d6ded 56 ProSitePatterns PS00582 Ribosomal protein L33 signature. 22 41 - T 11-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00331 7eef245884294409d65d9effdc7d6ded 56 Gene3D G3DSA:2.20.28.120 1 56 2.4E-28 T 11-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00331 7eef245884294409d65d9effdc7d6ded 56 Pfam PF00471 Ribosomal protein L33 8 54 3.5E-16 T 11-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02427 36cbee018b19fa4e9d5070b9da74a5bb 421 Gene3D G3DSA:2.30.30.60 209 255 4.2E-7 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily VSVS12_02427 36cbee018b19fa4e9d5070b9da74a5bb 421 Pfam PF00924 Mechanosensitive ion channel 150 399 4.0E-42 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VSVS12_02427 36cbee018b19fa4e9d5070b9da74a5bb 421 SUPERFAMILY SSF50182 192 259 8.5E-12 T 11-10-2018 IPR010920 LSM domain superfamily VSVS12_03692 6ce033dd2c33ad734e6eb31b1b5e050a 399 Gene3D G3DSA:1.20.1250.20 205 398 8.1E-18 T 11-10-2018 VSVS12_03692 6ce033dd2c33ad734e6eb31b1b5e050a 399 SUPERFAMILY SSF103473 14 384 8.37E-39 T 11-10-2018 IPR036259 MFS transporter superfamily VSVS12_03692 6ce033dd2c33ad734e6eb31b1b5e050a 399 Gene3D G3DSA:1.20.1250.20 13 204 3.0E-16 T 11-10-2018 VSVS12_03692 6ce033dd2c33ad734e6eb31b1b5e050a 399 Pfam PF07690 Major Facilitator Superfamily 15 204 1.3E-12 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VSVS12_03692 6ce033dd2c33ad734e6eb31b1b5e050a 399 Pfam PF07690 Major Facilitator Superfamily 214 385 1.8E-14 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VSVS12_00501 a57dd3b7c0d79d9f2d2263c48438736c 286 SUPERFAMILY SSF103481 180 270 3.66E-12 T 11-10-2018 VSVS12_00501 a57dd3b7c0d79d9f2d2263c48438736c 286 Pfam PF00892 EamA-like transporter family 146 270 5.6E-9 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VSVS12_00501 a57dd3b7c0d79d9f2d2263c48438736c 286 Pfam PF00892 EamA-like transporter family 8 139 6.7E-11 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VSVS12_00501 a57dd3b7c0d79d9f2d2263c48438736c 286 SUPERFAMILY SSF103481 43 143 1.83E-12 T 11-10-2018 VSVS12_04179 f9285510e160a915680fc68238ac8519 354 SUPERFAMILY SSF111369 44 254 1.02E-14 T 11-10-2018 VSVS12_04179 f9285510e160a915680fc68238ac8519 354 Gene3D G3DSA:2.40.420.20 312 324 4.6E-35 T 11-10-2018 VSVS12_04179 f9285510e160a915680fc68238ac8519 354 Gene3D G3DSA:2.40.30.170 235 311 4.6E-35 T 11-10-2018 VSVS12_04179 f9285510e160a915680fc68238ac8519 354 Pfam PF13437 HlyD family secretion protein 200 272 1.3E-6 T 11-10-2018 VSVS12_04179 f9285510e160a915680fc68238ac8519 354 Gene3D G3DSA:1.10.287.470 77 199 4.6E-35 T 11-10-2018 VSVS12_04179 f9285510e160a915680fc68238ac8519 354 Pfam PF13533 Biotin-lipoyl like 44 88 1.9E-15 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VSVS12_04179 f9285510e160a915680fc68238ac8519 354 Gene3D G3DSA:2.40.50.100 44 234 4.6E-35 T 11-10-2018 VSVS12_00252 f9a127b53e7a09c5cbc8e5f4c8941284 315 Gene3D G3DSA:3.10.25.10 210 314 2.2E-37 T 11-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VSVS12_00252 f9a127b53e7a09c5cbc8e5f4c8941284 315 Pfam PF00551 Formyl transferase 6 183 1.5E-45 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VSVS12_00252 f9a127b53e7a09c5cbc8e5f4c8941284 315 SUPERFAMILY SSF50486 208 310 2.55E-33 T 11-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 VSVS12_00252 f9a127b53e7a09c5cbc8e5f4c8941284 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 312 1.8E-105 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 VSVS12_00252 f9a127b53e7a09c5cbc8e5f4c8941284 315 Pfam PF02911 Formyl transferase, C-terminal domain 207 303 3.3E-29 T 11-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VSVS12_00252 f9a127b53e7a09c5cbc8e5f4c8941284 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 11-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VSVS12_00252 f9a127b53e7a09c5cbc8e5f4c8941284 315 SUPERFAMILY SSF53328 3 207 1.7E-65 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VSVS12_00252 f9a127b53e7a09c5cbc8e5f4c8941284 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 315 36.072 T 11-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 VSVS12_00252 f9a127b53e7a09c5cbc8e5f4c8941284 315 Gene3D G3DSA:3.40.50.170 1 209 7.3E-85 T 11-10-2018 VSVS12_00278 455587ba66708bec41e16f894b9dc99f 610 Pfam PF00009 Elongation factor Tu GTP binding domain 8 198 2.1E-57 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_00278 455587ba66708bec41e16f894b9dc99f 610 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 153 3.1E-24 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VSVS12_00278 455587ba66708bec41e16f894b9dc99f 610 SUPERFAMILY SSF50447 155 303 1.5E-32 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VSVS12_00278 455587ba66708bec41e16f894b9dc99f 610 Gene3D G3DSA:2.40.30.10 203 303 3.6E-31 T 11-10-2018 VSVS12_00278 455587ba66708bec41e16f894b9dc99f 610 Gene3D G3DSA:3.30.70.240 393 487 4.7E-127 T 11-10-2018 VSVS12_00278 455587ba66708bec41e16f894b9dc99f 610 SUPERFAMILY SSF54980 403 517 2.64E-27 T 11-10-2018 IPR035647 EF-G domain III/V-like VSVS12_00278 455587ba66708bec41e16f894b9dc99f 610 Gene3D G3DSA:2.40.50.250 488 604 4.7E-127 T 11-10-2018 VSVS12_00278 455587ba66708bec41e16f894b9dc99f 610 Pfam PF00679 Elongation factor G C-terminus 401 482 1.7E-20 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like VSVS12_00278 455587ba66708bec41e16f894b9dc99f 610 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 9 604 2.7E-288 T 11-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 VSVS12_00278 455587ba66708bec41e16f894b9dc99f 610 SUPERFAMILY SSF54980 306 391 1.22E-15 T 11-10-2018 IPR035647 EF-G domain III/V-like VSVS12_00278 455587ba66708bec41e16f894b9dc99f 610 Gene3D G3DSA:3.40.50.300 5 202 7.3E-69 T 11-10-2018 VSVS12_00278 455587ba66708bec41e16f894b9dc99f 610 SUPERFAMILY SSF52540 4 211 9.47E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00278 455587ba66708bec41e16f894b9dc99f 610 Pfam PF03144 Elongation factor Tu domain 2 223 293 7.9E-9 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VSVS12_00278 455587ba66708bec41e16f894b9dc99f 610 Gene3D G3DSA:3.30.70.870 310 595 4.7E-127 T 11-10-2018 VSVS12_00278 455587ba66708bec41e16f894b9dc99f 610 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site VSVS12_00278 455587ba66708bec41e16f894b9dc99f 610 PRINTS PR00315 GTP-binding elongation factor signature 55 63 1.8E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_00278 455587ba66708bec41e16f894b9dc99f 610 PRINTS PR00315 GTP-binding elongation factor signature 75 85 1.8E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_00278 455587ba66708bec41e16f894b9dc99f 610 PRINTS PR00315 GTP-binding elongation factor signature 91 102 1.8E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_00278 455587ba66708bec41e16f894b9dc99f 610 PRINTS PR00315 GTP-binding elongation factor signature 127 136 1.8E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_00278 455587ba66708bec41e16f894b9dc99f 610 PRINTS PR00315 GTP-binding elongation factor signature 11 24 1.8E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_00887 d28e71254716e214dbe777d52819a059 252 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 252 1.8E-105 T 11-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 VSVS12_00887 d28e71254716e214dbe777d52819a059 252 Gene3D G3DSA:3.60.15.10 1 252 2.7E-94 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VSVS12_00887 d28e71254716e214dbe777d52819a059 252 PIRSF PIRSF005457 1 252 6.0E-98 T 11-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 VSVS12_00887 d28e71254716e214dbe777d52819a059 252 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 167 252 2.3E-28 T 11-10-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 VSVS12_00887 d28e71254716e214dbe777d52819a059 252 SUPERFAMILY SSF56281 3 252 8.65E-71 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VSVS12_00887 d28e71254716e214dbe777d52819a059 252 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 2 252 45.22 T 11-10-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 VSVS12_00887 d28e71254716e214dbe777d52819a059 252 Pfam PF00753 Metallo-beta-lactamase superfamily 14 166 1.1E-18 T 11-10-2018 IPR001279 Metallo-beta-lactamase VSVS12_00887 d28e71254716e214dbe777d52819a059 252 SMART SM00849 12 166 6.6E-30 T 11-10-2018 IPR001279 Metallo-beta-lactamase VSVS12_01316 45b3cb5fc82b5e70d4902da037a66da6 330 SMART SM00382 46 239 2.2E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_01316 45b3cb5fc82b5e70d4902da037a66da6 330 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_01316 45b3cb5fc82b5e70d4902da037a66da6 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 241 308 3.2E-19 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VSVS12_01316 45b3cb5fc82b5e70d4902da037a66da6 330 Pfam PF00005 ABC transporter 38 189 8.6E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_01316 45b3cb5fc82b5e70d4902da037a66da6 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 326 6.0E-26 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VSVS12_01316 45b3cb5fc82b5e70d4902da037a66da6 330 SUPERFAMILY SSF52540 9 261 6.9E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01316 45b3cb5fc82b5e70d4902da037a66da6 330 Gene3D G3DSA:3.40.50.300 6 330 1.0E-96 T 11-10-2018 VSVS12_02613 11bed2456a6307273fce193cdc8e8dd7 137 Gene3D G3DSA:1.10.10.10 2 137 8.8E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_02613 11bed2456a6307273fce193cdc8e8dd7 137 SMART SM00347 23 127 5.1E-8 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VSVS12_02613 11bed2456a6307273fce193cdc8e8dd7 137 Pfam PF12802 MarR family 30 88 2.0E-11 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VSVS12_02613 11bed2456a6307273fce193cdc8e8dd7 137 SUPERFAMILY SSF46785 10 135 1.31E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_02613 11bed2456a6307273fce193cdc8e8dd7 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 9.5E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VSVS12_02613 11bed2456a6307273fce193cdc8e8dd7 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 84 100 9.5E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VSVS12_02613 11bed2456a6307273fce193cdc8e8dd7 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 65 80 9.5E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VSVS12_02613 11bed2456a6307273fce193cdc8e8dd7 137 PRINTS PR00598 Bacterial regulatory protein MarR family signature 48 64 9.5E-9 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VSVS12_01600 9a55e78e46ec1c9a4d6c6edb19f13520 478 Pfam PF08411 Exonuclease C-terminal 214 474 2.1E-103 T 11-10-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 VSVS12_01600 9a55e78e46ec1c9a4d6c6edb19f13520 478 PIRSF PIRSF000977 5 478 5.7E-196 T 11-10-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 VSVS12_01600 9a55e78e46ec1c9a4d6c6edb19f13520 478 SUPERFAMILY SSF53098 11 476 1.45E-133 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_01600 9a55e78e46ec1c9a4d6c6edb19f13520 478 Gene3D G3DSA:2.30.30.450 216 355 1.6E-54 T 11-10-2018 IPR038649 Exonuclease I, SH3-like domain superfamily VSVS12_01600 9a55e78e46ec1c9a4d6c6edb19f13520 478 Gene3D G3DSA:1.20.1280.70 362 423 2.4E-28 T 11-10-2018 VSVS12_01600 9a55e78e46ec1c9a4d6c6edb19f13520 478 Gene3D G3DSA:3.30.420.10 4 203 3.2E-70 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VSVS12_01600 9a55e78e46ec1c9a4d6c6edb19f13520 478 Pfam PF00929 Exonuclease 15 195 1.3E-21 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VSVS12_00386 11e24ac4bca076d227c04754c16ad593 377 TIGRFAM TIGR03573 WbuX: N-acetyl sugar amidotransferase 4 341 2.5E-93 T 11-10-2018 IPR020022 N-acetyl sugar amidotransferase VSVS12_00386 11e24ac4bca076d227c04754c16ad593 377 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 69 125 1.7E-5 T 11-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 VSVS12_00386 11e24ac4bca076d227c04754c16ad593 377 SUPERFAMILY SSF52402 53 207 1.7E-27 T 11-10-2018 VSVS12_00386 11e24ac4bca076d227c04754c16ad593 377 Gene3D G3DSA:3.40.50.620 6 269 1.0E-17 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VSVS12_03160 58455ed5f256dd38e0337814ced215cf 665 Gene3D G3DSA:3.40.50.920 539 664 3.7E-41 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VSVS12_03160 58455ed5f256dd38e0337814ced215cf 665 Pfam PF02780 Transketolase, C-terminal domain 542 654 1.0E-15 T 11-10-2018 IPR033248 Transketolase, C-terminal domain VSVS12_03160 58455ed5f256dd38e0337814ced215cf 665 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 4.2E-168 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VSVS12_03160 58455ed5f256dd38e0337814ced215cf 665 Gene3D G3DSA:3.40.50.970 2 326 2.2E-131 T 11-10-2018 VSVS12_03160 58455ed5f256dd38e0337814ced215cf 665 ProSitePatterns PS00802 Transketolase signature 2. 468 484 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VSVS12_03160 58455ed5f256dd38e0337814ced215cf 665 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 7.5E-47 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VSVS12_03160 58455ed5f256dd38e0337814ced215cf 665 TIGRFAM TIGR00232 tktlase_bact: transketolase 6 662 0.0 T 11-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 VSVS12_03160 58455ed5f256dd38e0337814ced215cf 665 SUPERFAMILY SSF52922 536 663 6.0E-40 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VSVS12_03160 58455ed5f256dd38e0337814ced215cf 665 SMART SM00861 355 527 1.6E-69 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VSVS12_03160 58455ed5f256dd38e0337814ced215cf 665 SUPERFAMILY SSF52518 6 330 2.56E-118 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold VSVS12_03160 58455ed5f256dd38e0337814ced215cf 665 SUPERFAMILY SSF52518 345 528 2.04E-67 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold VSVS12_03160 58455ed5f256dd38e0337814ced215cf 665 Gene3D G3DSA:3.40.50.970 327 538 1.4E-83 T 11-10-2018 VSVS12_03160 58455ed5f256dd38e0337814ced215cf 665 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VSVS12_00485 928fcb8a8dd151516c9131151b88a6ca 130 Gene3D G3DSA:3.30.1490.10 73 130 9.2E-25 T 11-10-2018 VSVS12_00485 928fcb8a8dd151516c9131151b88a6ca 130 Gene3D G3DSA:3.30.1370.30 2 72 1.8E-25 T 11-10-2018 VSVS12_00485 928fcb8a8dd151516c9131151b88a6ca 130 Pfam PF00410 Ribosomal protein S8 5 129 1.5E-46 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00485 928fcb8a8dd151516c9131151b88a6ca 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00485 928fcb8a8dd151516c9131151b88a6ca 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.008 T 11-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00485 928fcb8a8dd151516c9131151b88a6ca 130 SUPERFAMILY SSF56047 2 129 1.44E-43 T 11-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_03114 40b80e5febfd3b041d4f928bbe574d6b 296 Pfam PF03466 LysR substrate binding domain 91 289 3.7E-22 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_03114 40b80e5febfd3b041d4f928bbe574d6b 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.8E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_03114 40b80e5febfd3b041d4f928bbe574d6b 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.2E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_03114 40b80e5febfd3b041d4f928bbe574d6b 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.2E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_03114 40b80e5febfd3b041d4f928bbe574d6b 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.2E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_03114 40b80e5febfd3b041d4f928bbe574d6b 296 SUPERFAMILY SSF46785 3 87 1.52E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_03114 40b80e5febfd3b041d4f928bbe574d6b 296 Gene3D G3DSA:1.10.10.10 2 87 6.1E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_03114 40b80e5febfd3b041d4f928bbe574d6b 296 Gene3D G3DSA:3.40.190.290 93 294 4.3E-47 T 11-10-2018 VSVS12_03114 40b80e5febfd3b041d4f928bbe574d6b 296 SUPERFAMILY SSF53850 91 290 1.7E-25 T 11-10-2018 VSVS12_02559 c313cddaa372075d2cfbfdab4ca10a19 260 Gene3D G3DSA:3.40.50.11690 124 251 4.1E-36 T 11-10-2018 VSVS12_02559 c313cddaa372075d2cfbfdab4ca10a19 260 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 22 246 22.979 T 11-10-2018 IPR026579 Cell division protein FtsQ GO:0090529 VSVS12_02559 c313cddaa372075d2cfbfdab4ca10a19 260 Pfam PF08478 POTRA domain, FtsQ-type 53 122 1.0E-16 T 11-10-2018 IPR013685 POTRA domain, FtsQ-type VSVS12_02559 c313cddaa372075d2cfbfdab4ca10a19 260 Gene3D G3DSA:3.10.20.310 54 122 5.2E-25 T 11-10-2018 VSVS12_02559 c313cddaa372075d2cfbfdab4ca10a19 260 Pfam PF03799 Cell division protein FtsQ 126 238 6.1E-23 T 11-10-2018 IPR005548 Cell division protein FtsQ/DivIB VSVS12_03385 5c2ee9308dda5d4c294d178f5d9ff527 303 Gene3D G3DSA:1.10.3720.10 27 287 5.6E-35 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_03385 5c2ee9308dda5d4c294d178f5d9ff527 303 SUPERFAMILY SSF161098 26 293 4.39E-43 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_03385 5c2ee9308dda5d4c294d178f5d9ff527 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 285 1.8E-6 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VSVS12_02347 88e5d5e638e64785d25163d8a785eadd 482 Pfam PF02926 THUMP domain 29 158 9.8E-22 T 11-10-2018 IPR004114 THUMP domain GO:0003723 VSVS12_02347 88e5d5e638e64785d25163d8a785eadd 482 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 3.7E-72 T 11-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 VSVS12_02347 88e5d5e638e64785d25163d8a785eadd 482 SUPERFAMILY SSF143437 1 173 3.66E-46 T 11-10-2018 VSVS12_02347 88e5d5e638e64785d25163d8a785eadd 482 SUPERFAMILY SSF52821 399 481 4.32E-12 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily VSVS12_02347 88e5d5e638e64785d25163d8a785eadd 482 SUPERFAMILY SSF52402 174 372 4.85E-41 T 11-10-2018 VSVS12_02347 88e5d5e638e64785d25163d8a785eadd 482 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 382 482 9.9E-43 T 11-10-2018 IPR026340 Thiazole biosynthesis domain GO:0052837 KEGG: 00730+2.8.1.4 VSVS12_02347 88e5d5e638e64785d25163d8a785eadd 482 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 372 4.6E-111 T 11-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 VSVS12_02347 88e5d5e638e64785d25163d8a785eadd 482 Gene3D G3DSA:3.30.2130.30 1 174 4.8E-31 T 11-10-2018 VSVS12_02347 88e5d5e638e64785d25163d8a785eadd 482 Gene3D G3DSA:3.40.250.10 398 482 3.2E-11 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily VSVS12_02347 88e5d5e638e64785d25163d8a785eadd 482 SMART SM00981 75 165 2.2E-22 T 11-10-2018 IPR004114 THUMP domain GO:0003723 VSVS12_02347 88e5d5e638e64785d25163d8a785eadd 482 Gene3D G3DSA:3.40.50.620 175 397 2.3E-50 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VSVS12_02347 88e5d5e638e64785d25163d8a785eadd 482 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 482 222.903 T 11-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 VSVS12_02953 bbd9308be0d08c54ef4fd5f26716ae94 170 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 160 2.4E-82 T 11-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 VSVS12_02953 bbd9308be0d08c54ef4fd5f26716ae94 170 Pfam PF03737 Aldolase/RraA 6 152 1.4E-38 T 11-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VSVS12_02953 bbd9308be0d08c54ef4fd5f26716ae94 170 SUPERFAMILY SSF89562 2 158 4.45E-46 T 11-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily VSVS12_02953 bbd9308be0d08c54ef4fd5f26716ae94 170 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 7.3E-67 T 11-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 VSVS12_02953 bbd9308be0d08c54ef4fd5f26716ae94 170 Gene3D G3DSA:3.50.30.40 1 161 2.0E-61 T 11-10-2018 VSVS12_02953 bbd9308be0d08c54ef4fd5f26716ae94 170 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 46.506 T 11-10-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 VSVS12_02034 44f52e2b9c97b54c0252323341bf647a 289 Gene3D G3DSA:3.90.550.10 52 241 1.7E-5 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VSVS12_02034 44f52e2b9c97b54c0252323341bf647a 289 SUPERFAMILY SSF53448 51 245 4.18E-12 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VSVS12_00726 522161b54df4010ca37bd5501ed18a89 654 SUPERFAMILY SSF140990 403 596 8.5E-75 T 11-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 VSVS12_00726 522161b54df4010ca37bd5501ed18a89 654 SUPERFAMILY SSF52540 144 392 9.3E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00726 522161b54df4010ca37bd5501ed18a89 654 Gene3D G3DSA:2.40.50.920 24 100 1.3E-27 T 11-10-2018 VSVS12_00726 522161b54df4010ca37bd5501ed18a89 654 ProSitePatterns PS00674 AAA-protein family signature. 292 310 - T 11-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 VSVS12_00726 522161b54df4010ca37bd5501ed18a89 654 Gene3D G3DSA:3.40.50.300 137 323 3.0E-70 T 11-10-2018 VSVS12_00726 522161b54df4010ca37bd5501ed18a89 654 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 102 594 8.5E-243 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 VSVS12_00726 522161b54df4010ca37bd5501ed18a89 654 Pfam PF06480 FtsH Extracellular 5 94 5.6E-12 T 11-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 VSVS12_00726 522161b54df4010ca37bd5501ed18a89 654 Pfam PF01434 Peptidase family M41 383 593 4.8E-81 T 11-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 VSVS12_00726 522161b54df4010ca37bd5501ed18a89 654 Gene3D G3DSA:1.20.58.760 398 602 5.1E-72 T 11-10-2018 VSVS12_00726 522161b54df4010ca37bd5501ed18a89 654 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 189 321 5.2E-46 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VSVS12_00726 522161b54df4010ca37bd5501ed18a89 654 SMART SM00382 185 324 5.1E-26 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_00726 522161b54df4010ca37bd5501ed18a89 654 Gene3D G3DSA:1.10.8.60 324 397 2.1E-27 T 11-10-2018 VSVS12_00726 522161b54df4010ca37bd5501ed18a89 654 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 616 37.262 T 11-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 VSVS12_00912 d246e49492ec71b8c29d105e5506a916 392 SUPERFAMILY SSF56601 13 283 1.5E-82 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VSVS12_00912 d246e49492ec71b8c29d105e5506a916 392 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 283 373 1.6E-28 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VSVS12_00912 d246e49492ec71b8c29d105e5506a916 392 SMART SM00936 283 373 2.8E-39 T 11-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VSVS12_00912 d246e49492ec71b8c29d105e5506a916 392 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 34 263 2.4E-92 T 11-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 VSVS12_00912 d246e49492ec71b8c29d105e5506a916 392 Gene3D G3DSA:2.60.410.10 283 373 1.4E-31 T 11-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VSVS12_00912 d246e49492ec71b8c29d105e5506a916 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 122 139 3.0E-17 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VSVS12_00912 d246e49492ec71b8c29d105e5506a916 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 149 162 3.0E-17 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VSVS12_00912 d246e49492ec71b8c29d105e5506a916 392 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 66 77 3.0E-17 T 11-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 VSVS12_00912 d246e49492ec71b8c29d105e5506a916 392 Gene3D G3DSA:3.40.710.10 27 282 9.7E-90 T 11-10-2018 VSVS12_00912 d246e49492ec71b8c29d105e5506a916 392 SUPERFAMILY SSF69189 283 375 2.16E-28 T 11-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VSVS12_02937 b9f216f6befa5a6cff7937a77ee40ee4 121 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 121 24.492 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02937 b9f216f6befa5a6cff7937a77ee40ee4 121 Gene3D G3DSA:3.30.1390.10 51 121 6.5E-31 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VSVS12_02937 b9f216f6befa5a6cff7937a77ee40ee4 121 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 55 121 1.7E-30 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02937 b9f216f6befa5a6cff7937a77ee40ee4 121 Gene3D G3DSA:1.20.5.710 2 50 2.9E-22 T 11-10-2018 VSVS12_02937 b9f216f6befa5a6cff7937a77ee40ee4 121 SUPERFAMILY SSF48300 4 57 1.44E-14 T 11-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02937 b9f216f6befa5a6cff7937a77ee40ee4 121 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 50 3.4E-15 T 11-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02937 b9f216f6befa5a6cff7937a77ee40ee4 121 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 121 1.2E-45 T 11-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02937 b9f216f6befa5a6cff7937a77ee40ee4 121 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 57 92 3.0E-11 T 11-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02937 b9f216f6befa5a6cff7937a77ee40ee4 121 SUPERFAMILY SSF54736 51 121 2.09E-24 T 11-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like VSVS12_00583 12d23d998cbc7838c3c6b840abeae813 290 Pfam PF00483 Nucleotidyl transferase 9 265 6.1E-32 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 VSVS12_00583 12d23d998cbc7838c3c6b840abeae813 290 Gene3D G3DSA:3.90.550.10 1 279 1.1E-81 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VSVS12_00583 12d23d998cbc7838c3c6b840abeae813 290 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 2 263 3.5E-124 T 11-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 VSVS12_00583 12d23d998cbc7838c3c6b840abeae813 290 SUPERFAMILY SSF53448 2 275 2.25E-64 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VSVS12_01237 66a666361caeda19423a6de37dcc33a8 56 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 54 16.844 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_01237 66a666361caeda19423a6de37dcc33a8 56 SUPERFAMILY SSF57829 2 55 7.94E-17 T 11-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 VSVS12_01237 66a666361caeda19423a6de37dcc33a8 56 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 1.4E-18 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_01237 66a666361caeda19423a6de37dcc33a8 56 Pfam PF01783 Ribosomal L32p protein family 2 56 4.1E-19 T 11-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_04415 1cca213e2ff33bf63b22473ab0075e75 542 SUPERFAMILY SSF52540 104 515 2.79E-31 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_04415 1cca213e2ff33bf63b22473ab0075e75 542 Gene3D G3DSA:3.40.50.300 219 519 4.4E-54 T 11-10-2018 VSVS12_04415 1cca213e2ff33bf63b22473ab0075e75 542 Pfam PF00437 Type II/IV secretion system protein 108 392 2.1E-25 T 11-10-2018 IPR001482 Type II/IV secretion system protein VSVS12_04415 1cca213e2ff33bf63b22473ab0075e75 542 Gene3D G3DSA:3.30.450.90 68 214 4.9E-8 T 11-10-2018 VSVS12_03322 ad79e1d04511e3197bcfa99ae4790009 103 Gene3D G3DSA:1.10.10.10 26 83 7.1E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_03322 ad79e1d04511e3197bcfa99ae4790009 103 Hamap MF_00674 UPF0251 protein . 2 97 23.176 T 11-10-2018 IPR002852 Uncharacterised protein family UPF0251 VSVS12_03322 ad79e1d04511e3197bcfa99ae4790009 103 Pfam PF02001 Protein of unknown function DUF134 2 90 8.5E-20 T 11-10-2018 IPR002852 Uncharacterised protein family UPF0251 VSVS12_03322 ad79e1d04511e3197bcfa99ae4790009 103 SUPERFAMILY SSF88659 33 83 2.18E-5 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VSVS12_03109 6657d215cbdfa9c9e8cc8a79098a05df 328 Gene3D G3DSA:1.10.760.10 39 186 4.3E-109 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VSVS12_03109 6657d215cbdfa9c9e8cc8a79098a05df 328 Gene3D G3DSA:1.10.760.10 37 310 4.3E-109 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VSVS12_03109 6657d215cbdfa9c9e8cc8a79098a05df 328 PIRSF PIRSF000294 16 328 9.0E-122 T 11-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 VSVS12_03109 6657d215cbdfa9c9e8cc8a79098a05df 328 SUPERFAMILY SSF46626 23 174 7.94E-47 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VSVS12_03109 6657d215cbdfa9c9e8cc8a79098a05df 328 Pfam PF00034 Cytochrome c 195 304 2.4E-11 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_03109 6657d215cbdfa9c9e8cc8a79098a05df 328 Pfam PF03150 Di-haem cytochrome c peroxidase 39 186 8.7E-48 T 11-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 VSVS12_03109 6657d215cbdfa9c9e8cc8a79098a05df 328 SUPERFAMILY SSF46626 173 324 4.05E-42 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VSVS12_02788 148e3b3309b609295666cf32b2d85039 275 Pfam PF00561 alpha/beta hydrolase fold 25 258 1.0E-17 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VSVS12_02788 148e3b3309b609295666cf32b2d85039 275 SUPERFAMILY SSF53474 5 271 1.8E-59 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold VSVS12_02788 148e3b3309b609295666cf32b2d85039 275 Gene3D G3DSA:3.40.50.1820 5 273 1.4E-53 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold VSVS12_02788 148e3b3309b609295666cf32b2d85039 275 PRINTS PR00412 Epoxide hydrolase signature 108 121 6.5E-7 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VSVS12_02788 148e3b3309b609295666cf32b2d85039 275 PRINTS PR00412 Epoxide hydrolase signature 49 64 6.5E-7 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VSVS12_02788 148e3b3309b609295666cf32b2d85039 275 PRINTS PR00412 Epoxide hydrolase signature 247 269 6.5E-7 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VSVS12_02788 148e3b3309b609295666cf32b2d85039 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 108 121 3.4E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VSVS12_02788 148e3b3309b609295666cf32b2d85039 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 3.4E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VSVS12_02788 148e3b3309b609295666cf32b2d85039 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 216 230 3.4E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VSVS12_02788 148e3b3309b609295666cf32b2d85039 275 PRINTS PR00111 Alpha/beta hydrolase fold signature 94 107 3.4E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VSVS12_02162 341f62046204540d1a02e8b56698764e 297 SUPERFAMILY SSF53850 94 292 3.62E-23 T 11-10-2018 VSVS12_02162 341f62046204540d1a02e8b56698764e 297 Gene3D G3DSA:1.10.10.10 1 91 3.4E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_02162 341f62046204540d1a02e8b56698764e 297 Gene3D G3DSA:3.40.190.290 93 296 8.2E-41 T 11-10-2018 VSVS12_02162 341f62046204540d1a02e8b56698764e 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 3.5E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_02162 341f62046204540d1a02e8b56698764e 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 6.0E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_02162 341f62046204540d1a02e8b56698764e 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 6.0E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_02162 341f62046204540d1a02e8b56698764e 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 6.0E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_02162 341f62046204540d1a02e8b56698764e 297 Pfam PF03466 LysR substrate binding domain 94 253 1.1E-17 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_02162 341f62046204540d1a02e8b56698764e 297 SUPERFAMILY SSF46785 3 87 2.11E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_00607 6f1051d9b95b35534ec30a0625cf7d45 295 Pfam PF04085 rod shape-determining protein MreC 123 269 2.6E-39 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 VSVS12_00607 6f1051d9b95b35534ec30a0625cf7d45 295 Gene3D G3DSA:2.40.10.340 121 266 5.0E-36 T 11-10-2018 VSVS12_00607 6f1051d9b95b35534ec30a0625cf7d45 295 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 275 8.9E-86 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 VSVS12_00607 6f1051d9b95b35534ec30a0625cf7d45 295 Gene3D G3DSA:2.40.10.350 180 257 5.0E-36 T 11-10-2018 VSVS12_00607 6f1051d9b95b35534ec30a0625cf7d45 295 PIRSF PIRSF038471 2 284 2.1E-80 T 11-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 VSVS12_00475 a0089e47e29856286f95706cc2433e5d 92 PIRSF PIRSF002144 1 92 1.1E-31 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00475 a0089e47e29856286f95706cc2433e5d 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 1.4E-46 T 11-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 VSVS12_00475 a0089e47e29856286f95706cc2433e5d 92 Gene3D G3DSA:3.30.860.10 1 92 8.0E-44 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00475 a0089e47e29856286f95706cc2433e5d 92 Pfam PF00203 Ribosomal protein S19 3 83 1.3E-36 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00475 a0089e47e29856286f95706cc2433e5d 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 7.7E-25 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00475 a0089e47e29856286f95706cc2433e5d 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 7.7E-25 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00475 a0089e47e29856286f95706cc2433e5d 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 7.7E-25 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00475 a0089e47e29856286f95706cc2433e5d 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 11-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00475 a0089e47e29856286f95706cc2433e5d 92 SUPERFAMILY SSF54570 3 84 1.31E-35 T 11-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00475 a0089e47e29856286f95706cc2433e5d 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.779 T 11-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_03126 e49581064b795d87b75f7ea8adea4500 1050 SUPERFAMILY SSF82714 723 809 1.83E-21 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VSVS12_03126 e49581064b795d87b75f7ea8adea4500 1050 SUPERFAMILY SSF82714 182 272 1.44E-22 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VSVS12_03126 e49581064b795d87b75f7ea8adea4500 1050 Gene3D G3DSA:3.30.2090.10 179 275 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VSVS12_03126 e49581064b795d87b75f7ea8adea4500 1050 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1041 0.0 T 11-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 VSVS12_03126 e49581064b795d87b75f7ea8adea4500 1050 Gene3D G3DSA:3.30.70.1430 568 669 0.0 T 11-10-2018 VSVS12_03126 e49581064b795d87b75f7ea8adea4500 1050 Gene3D G3DSA:3.30.70.1440 670 866 0.0 T 11-10-2018 VSVS12_03126 e49581064b795d87b75f7ea8adea4500 1050 Gene3D G3DSA:1.20.1640.10 514 1023 0.0 T 11-10-2018 VSVS12_03126 e49581064b795d87b75f7ea8adea4500 1050 SUPERFAMILY SSF82866 296 497 9.68E-47 T 11-10-2018 VSVS12_03126 e49581064b795d87b75f7ea8adea4500 1050 SUPERFAMILY SSF82693 566 670 1.12E-31 T 11-10-2018 VSVS12_03126 e49581064b795d87b75f7ea8adea4500 1050 SUPERFAMILY SSF82693 38 131 1.78E-24 T 11-10-2018 VSVS12_03126 e49581064b795d87b75f7ea8adea4500 1050 Gene3D G3DSA:3.30.2090.10 722 810 0.0 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VSVS12_03126 e49581064b795d87b75f7ea8adea4500 1050 Pfam PF00873 AcrB/AcrD/AcrF family 1 1026 0.0 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_03126 e49581064b795d87b75f7ea8adea4500 1050 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 9.5E-112 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_03126 e49581064b795d87b75f7ea8adea4500 1050 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 9.5E-112 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_03126 e49581064b795d87b75f7ea8adea4500 1050 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 9.5E-112 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_03126 e49581064b795d87b75f7ea8adea4500 1050 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 9.5E-112 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_03126 e49581064b795d87b75f7ea8adea4500 1050 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 9.5E-112 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_03126 e49581064b795d87b75f7ea8adea4500 1050 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 9.5E-112 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_03126 e49581064b795d87b75f7ea8adea4500 1050 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 9.5E-112 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_03126 e49581064b795d87b75f7ea8adea4500 1050 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 9.5E-112 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_03126 e49581064b795d87b75f7ea8adea4500 1050 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 9.5E-112 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_03126 e49581064b795d87b75f7ea8adea4500 1050 Gene3D G3DSA:3.30.70.1320 133 332 0.0 T 11-10-2018 VSVS12_03126 e49581064b795d87b75f7ea8adea4500 1050 SUPERFAMILY SSF82693 135 330 8.11E-24 T 11-10-2018 VSVS12_03126 e49581064b795d87b75f7ea8adea4500 1050 SUPERFAMILY SSF82866 808 1029 2.09E-44 T 11-10-2018 VSVS12_03126 e49581064b795d87b75f7ea8adea4500 1050 Gene3D G3DSA:1.20.1640.10 8 513 0.0 T 11-10-2018 VSVS12_03126 e49581064b795d87b75f7ea8adea4500 1050 Gene3D G3DSA:3.30.70.1430 38 818 0.0 T 11-10-2018 VSVS12_00548 53103b0729d9de5ab89219b71adf18c1 162 Pfam PF02470 MlaD protein 39 118 5.8E-19 T 11-10-2018 IPR003399 Mce/MlaD VSVS12_00548 53103b0729d9de5ab89219b71adf18c1 162 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 4 152 4.2E-54 T 11-10-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 VSVS12_02627 34458cee7e2555173e85997f2f800d74 238 SUPERFAMILY SSF46894 137 233 1.98E-20 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VSVS12_02627 34458cee7e2555173e85997f2f800d74 238 Gene3D G3DSA:1.10.10.10 124 236 1.1E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_02627 34458cee7e2555173e85997f2f800d74 238 SUPERFAMILY SSF52172 2 130 6.12E-36 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_02627 34458cee7e2555173e85997f2f800d74 238 Gene3D G3DSA:3.40.50.2300 1 123 7.3E-33 T 11-10-2018 VSVS12_02627 34458cee7e2555173e85997f2f800d74 238 SMART SM00862 156 232 9.4E-14 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VSVS12_02627 34458cee7e2555173e85997f2f800d74 238 SMART SM00448 4 114 1.2E-37 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_02627 34458cee7e2555173e85997f2f800d74 238 Pfam PF00072 Response regulator receiver domain 6 113 1.1E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_02627 34458cee7e2555173e85997f2f800d74 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 232 3.5E-17 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VSVS12_01288 a3225ffaac10140f64ce228667989093 329 SUPERFAMILY SSF51604 105 311 5.37E-44 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VSVS12_01288 a3225ffaac10140f64ce228667989093 329 SMART SM00922 117 212 1.3E-4 T 11-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal VSVS12_01288 a3225ffaac10140f64ce228667989093 329 Pfam PF13378 Enolase C-terminal domain-like 126 278 3.2E-11 T 11-10-2018 IPR029065 Enolase C-terminal domain-like VSVS12_01288 a3225ffaac10140f64ce228667989093 329 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 7 313 2.8E-105 T 11-10-2018 VSVS12_01288 a3225ffaac10140f64ce228667989093 329 SUPERFAMILY SSF54826 1 101 8.35E-28 T 11-10-2018 VSVS12_01288 a3225ffaac10140f64ce228667989093 329 Gene3D G3DSA:3.20.20.120 100 301 2.6E-113 T 11-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily VSVS12_01288 a3225ffaac10140f64ce228667989093 329 Gene3D G3DSA:3.30.390.10 3 306 2.6E-113 T 11-10-2018 IPR029017 Enolase-like, N-terminal VSVS12_01288 a3225ffaac10140f64ce228667989093 329 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 327 21.208 T 11-10-2018 IPR010196 o-Succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 VSVS12_03338 e8cd2963774ff95886ef5070f7aa2b57 378 Gene3D G3DSA:1.20.1090.10 184 378 4.7E-62 T 11-10-2018 VSVS12_03338 e8cd2963774ff95886ef5070f7aa2b57 378 Gene3D G3DSA:3.40.50.1970 1 182 1.6E-52 T 11-10-2018 VSVS12_03338 e8cd2963774ff95886ef5070f7aa2b57 378 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 171 199 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VSVS12_03338 e8cd2963774ff95886ef5070f7aa2b57 378 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 258 278 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VSVS12_03338 e8cd2963774ff95886ef5070f7aa2b57 378 SUPERFAMILY SSF56796 3 378 6.93E-117 T 11-10-2018 VSVS12_03338 e8cd2963774ff95886ef5070f7aa2b57 378 Pfam PF00465 Iron-containing alcohol dehydrogenase 7 368 5.0E-113 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VSVS12_02282 d10a93a297c0ae515402867393e47383 87 Pfam PF08891 YfcL protein 4 84 4.8E-31 T 11-10-2018 IPR014987 Uncharacterised protein family YfcL VSVS12_03108 8283f73aa958777e32548d11eb4c7e3a 438 Gene3D G3DSA:3.40.50.80 313 438 9.0E-17 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VSVS12_03108 8283f73aa958777e32548d11eb4c7e3a 438 SUPERFAMILY SSF52343 312 435 4.71E-18 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VSVS12_03108 8283f73aa958777e32548d11eb4c7e3a 438 Gene3D G3DSA:2.40.30.10 225 312 1.2E-14 T 11-10-2018 VSVS12_03108 8283f73aa958777e32548d11eb4c7e3a 438 Pfam PF01794 Ferric reductase like transmembrane component 43 176 5.7E-16 T 11-10-2018 IPR013130 Ferric reductase transmembrane component-like domain VSVS12_03108 8283f73aa958777e32548d11eb4c7e3a 438 Pfam PF08022 FAD-binding domain 250 311 3.0E-6 T 11-10-2018 IPR013112 FAD-binding 8 GO:0016491|GO:0055114 VSVS12_03108 8283f73aa958777e32548d11eb4c7e3a 438 SUPERFAMILY SSF63380 235 312 4.84E-16 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VSVS12_04207 647c30f93c7fb1a98d3d7b1c54729ef3 236 SUPERFAMILY SSF46689 185 232 9.41E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_04207 647c30f93c7fb1a98d3d7b1c54729ef3 236 SMART SM00342 149 231 8.2E-26 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VSVS12_04207 647c30f93c7fb1a98d3d7b1c54729ef3 236 Pfam PF12833 Helix-turn-helix domain 156 232 1.5E-17 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VSVS12_04207 647c30f93c7fb1a98d3d7b1c54729ef3 236 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 185 227 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VSVS12_04207 647c30f93c7fb1a98d3d7b1c54729ef3 236 Gene3D G3DSA:1.10.10.60 128 234 4.8E-26 T 11-10-2018 VSVS12_04207 647c30f93c7fb1a98d3d7b1c54729ef3 236 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 200 215 2.3E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VSVS12_04207 647c30f93c7fb1a98d3d7b1c54729ef3 236 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 215 231 2.3E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VSVS12_02538 bdd0f8964045613b3a4f2135ae4a6114 257 Gene3D G3DSA:3.20.20.140 1 255 5.4E-79 T 11-10-2018 VSVS12_02538 bdd0f8964045613b3a4f2135ae4a6114 257 SUPERFAMILY SSF51556 3 250 3.69E-73 T 11-10-2018 IPR032466 Metal-dependent hydrolase VSVS12_02538 bdd0f8964045613b3a4f2135ae4a6114 257 Pfam PF01026 TatD related DNase 4 253 1.0E-63 T 11-10-2018 IPR001130 TatD family GO:0016788 VSVS12_02538 bdd0f8964045613b3a4f2135ae4a6114 257 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VSVS12_02538 bdd0f8964045613b3a4f2135ae4a6114 257 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 190 206 - T 11-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 VSVS12_02538 bdd0f8964045613b3a4f2135ae4a6114 257 PIRSF PIRSF005902 1 257 5.5E-62 T 11-10-2018 IPR001130 TatD family GO:0016788 VSVS12_04546 d84c15959b6703feb7a22637cb44a175 214 SMART SM00934 4 205 4.9E-19 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VSVS12_04546 d84c15959b6703feb7a22637cb44a175 214 Gene3D G3DSA:3.20.20.70 1 214 1.6E-65 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_04546 d84c15959b6703feb7a22637cb44a175 214 SUPERFAMILY SSF51366 3 213 4.98E-31 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VSVS12_04546 d84c15959b6703feb7a22637cb44a175 214 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 4 199 2.7E-22 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VSVS12_04573 d84c15959b6703feb7a22637cb44a175 214 SMART SM00934 4 205 4.9E-19 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VSVS12_04573 d84c15959b6703feb7a22637cb44a175 214 Gene3D G3DSA:3.20.20.70 1 214 1.6E-65 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_04573 d84c15959b6703feb7a22637cb44a175 214 SUPERFAMILY SSF51366 3 213 4.98E-31 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VSVS12_04573 d84c15959b6703feb7a22637cb44a175 214 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 4 199 2.7E-22 T 11-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VSVS12_02884 b91c0cb96bed144e473e5cb82eba4a65 150 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 26.022 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_02884 b91c0cb96bed144e473e5cb82eba4a65 150 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 1.4E-53 T 11-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_02884 b91c0cb96bed144e473e5cb82eba4a65 150 SUPERFAMILY SSF55658 1 57 5.58E-19 T 11-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal VSVS12_02884 b91c0cb96bed144e473e5cb82eba4a65 150 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02884 b91c0cb96bed144e473e5cb82eba4a65 150 SUPERFAMILY SSF55653 60 149 9.81E-25 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily VSVS12_02884 b91c0cb96bed144e473e5cb82eba4a65 150 Gene3D G3DSA:3.10.430.100 61 149 2.3E-29 T 11-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily VSVS12_02884 b91c0cb96bed144e473e5cb82eba4a65 150 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 8.4E-24 T 11-10-2018 IPR020069 Ribosomal protein L9, C-terminal VSVS12_02884 b91c0cb96bed144e473e5cb82eba4a65 150 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 3.7E-21 T 11-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02884 b91c0cb96bed144e473e5cb82eba4a65 150 Gene3D G3DSA:3.40.5.10 1 50 9.5E-24 T 11-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_01584 56b21eaca193d59c5c41279ce370fa03 564 ProSitePatterns PS01233 Urocanase signature. 442 457 - T 11-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VSVS12_01584 56b21eaca193d59c5c41279ce370fa03 564 Pfam PF17391 Urocanase N-terminal domain 15 141 4.3E-62 T 11-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VSVS12_01584 56b21eaca193d59c5c41279ce370fa03 564 Pfam PF17392 Urocanase C-terminal domain 352 546 4.0E-91 T 11-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VSVS12_01584 56b21eaca193d59c5c41279ce370fa03 564 SUPERFAMILY SSF111326 9 556 5.89E-256 T 11-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VSVS12_01584 56b21eaca193d59c5c41279ce370fa03 564 Gene3D G3DSA:3.40.50.10730 145 349 6.5E-256 T 11-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VSVS12_01584 56b21eaca193d59c5c41279ce370fa03 564 Hamap MF_00577 Urocanate hydratase [hutU]. 5 556 49.161 T 11-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VSVS12_01584 56b21eaca193d59c5c41279ce370fa03 564 Pfam PF01175 Urocanase Rossmann-like domain 144 349 4.0E-83 T 11-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VSVS12_01584 56b21eaca193d59c5c41279ce370fa03 564 TIGRFAM TIGR01228 hutU: urocanate hydratase 13 554 3.7E-287 T 11-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VSVS12_01584 56b21eaca193d59c5c41279ce370fa03 564 Gene3D G3DSA:3.40.1770.10 20 542 6.5E-256 T 11-10-2018 VSVS12_01584 56b21eaca193d59c5c41279ce370fa03 564 PIRSF PIRSF001423 1 561 1.0E-291 T 11-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 VSVS12_01536 c980cd3d32915e35aa11495fc46260bc 165 SMART SM00448 4 125 1.5E-9 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_01536 c980cd3d32915e35aa11495fc46260bc 165 SUPERFAMILY SSF52172 1 150 1.39E-19 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_01536 c980cd3d32915e35aa11495fc46260bc 165 Pfam PF00072 Response regulator receiver domain 6 125 3.0E-12 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_01536 c980cd3d32915e35aa11495fc46260bc 165 Gene3D G3DSA:3.40.50.2300 1 136 3.9E-18 T 11-10-2018 VSVS12_03528 66f338082c2f0e62bd007899057cdd05 603 Pfam PF00970 Oxidoreductase FAD-binding domain 283 376 2.6E-15 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 VSVS12_03528 66f338082c2f0e62bd007899057cdd05 603 SUPERFAMILY SSF54292 498 602 3.28E-26 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VSVS12_03528 66f338082c2f0e62bd007899057cdd05 603 Pfam PF00175 Oxidoreductase NAD-binding domain 387 490 5.4E-17 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VSVS12_03528 66f338082c2f0e62bd007899057cdd05 603 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 386 405 1.2E-7 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VSVS12_03528 66f338082c2f0e62bd007899057cdd05 603 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 423 434 1.2E-7 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VSVS12_03528 66f338082c2f0e62bd007899057cdd05 603 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 476 484 1.2E-7 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VSVS12_03528 66f338082c2f0e62bd007899057cdd05 603 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 326 333 1.2E-7 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VSVS12_03528 66f338082c2f0e62bd007899057cdd05 603 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 307 317 1.2E-7 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VSVS12_03528 66f338082c2f0e62bd007899057cdd05 603 Gene3D G3DSA:3.40.50.80 379 511 6.2E-30 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VSVS12_03528 66f338082c2f0e62bd007899057cdd05 603 Gene3D G3DSA:3.10.20.30 518 603 4.9E-21 T 11-10-2018 IPR012675 Beta-grasp domain superfamily VSVS12_03528 66f338082c2f0e62bd007899057cdd05 603 Pfam PF03473 MOSC domain 139 262 1.2E-28 T 11-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 VSVS12_03528 66f338082c2f0e62bd007899057cdd05 603 Pfam PF03476 MOSC N-terminal beta barrel domain 5 117 5.5E-29 T 11-10-2018 IPR005303 MOSC, N-terminal beta barrel KEGG: 00790+2.8.1.9|MetaCyc: PWY-5963 VSVS12_03528 66f338082c2f0e62bd007899057cdd05 603 SUPERFAMILY SSF50800 6 264 1.83E-14 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily VSVS12_03528 66f338082c2f0e62bd007899057cdd05 603 Gene3D G3DSA:2.40.30.10 277 376 1.9E-21 T 11-10-2018 VSVS12_03528 66f338082c2f0e62bd007899057cdd05 603 SUPERFAMILY SSF141673 8 133 6.28E-31 T 11-10-2018 VSVS12_03528 66f338082c2f0e62bd007899057cdd05 603 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 553 561 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VSVS12_03528 66f338082c2f0e62bd007899057cdd05 603 SUPERFAMILY SSF63380 273 380 6.5E-24 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VSVS12_03528 66f338082c2f0e62bd007899057cdd05 603 PRINTS PR00410 Phenol hydroxylase reductase family signature 370 379 1.3E-7 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VSVS12_03528 66f338082c2f0e62bd007899057cdd05 603 PRINTS PR00410 Phenol hydroxylase reductase family signature 386 405 1.3E-7 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VSVS12_03528 66f338082c2f0e62bd007899057cdd05 603 PRINTS PR00410 Phenol hydroxylase reductase family signature 476 484 1.3E-7 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VSVS12_03528 66f338082c2f0e62bd007899057cdd05 603 PRINTS PR00410 Phenol hydroxylase reductase family signature 307 319 1.3E-7 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VSVS12_03528 66f338082c2f0e62bd007899057cdd05 603 SUPERFAMILY SSF52343 367 506 1.7E-35 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VSVS12_03528 66f338082c2f0e62bd007899057cdd05 603 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 528 595 3.0E-13 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VSVS12_02665 2cc1ae8930c4c4cb94c1e421618bc6b9 107 SUPERFAMILY SSF102829 6 97 1.83E-19 T 11-10-2018 IPR036192 Cell division protein ZapA-like superfamily VSVS12_02665 2cc1ae8930c4c4cb94c1e421618bc6b9 107 Gene3D G3DSA:1.10.20.30 1 47 1.9E-19 T 11-10-2018 VSVS12_02665 2cc1ae8930c4c4cb94c1e421618bc6b9 107 Pfam PF05164 Cell division protein ZapA 6 92 8.2E-20 T 11-10-2018 IPR007838 Cell division protein ZapA-like VSVS12_00156 fb0a388699ead5a6ba873e00262d77d2 313 SUPERFAMILY SSF53850 92 307 9.15E-48 T 11-10-2018 VSVS12_00156 fb0a388699ead5a6ba873e00262d77d2 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 1.5E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_00156 fb0a388699ead5a6ba873e00262d77d2 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 1.5E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_00156 fb0a388699ead5a6ba873e00262d77d2 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 1.5E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_00156 fb0a388699ead5a6ba873e00262d77d2 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 67 7.1E-14 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_00156 fb0a388699ead5a6ba873e00262d77d2 313 Gene3D G3DSA:3.40.190.10 94 304 1.0E-57 T 11-10-2018 VSVS12_00156 fb0a388699ead5a6ba873e00262d77d2 313 SUPERFAMILY SSF46785 7 88 6.53E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_00156 fb0a388699ead5a6ba873e00262d77d2 313 Gene3D G3DSA:1.10.10.10 2 90 3.3E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_00156 fb0a388699ead5a6ba873e00262d77d2 313 Pfam PF03466 LysR substrate binding domain 100 308 1.1E-28 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_00156 fb0a388699ead5a6ba873e00262d77d2 313 Gene3D G3DSA:3.40.190.10 182 280 1.0E-57 T 11-10-2018 VSVS12_02215 e8db9300d1ce41db0468fb6c830a9dda 551 SUPERFAMILY SSF82689 448 544 1.26E-31 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 VSVS12_02215 e8db9300d1ce41db0468fb6c830a9dda 551 Gene3D G3DSA:3.30.70.100 446 538 1.4E-25 T 11-10-2018 VSVS12_02215 e8db9300d1ce41db0468fb6c830a9dda 551 SUPERFAMILY SSF82861 292 378 2.62E-13 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 VSVS12_02215 e8db9300d1ce41db0468fb6c830a9dda 551 Gene3D G3DSA:2.30.30.60 395 443 2.6E-18 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily VSVS12_02215 e8db9300d1ce41db0468fb6c830a9dda 551 Pfam PF00924 Mechanosensitive ion channel 343 534 1.8E-54 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VSVS12_02215 e8db9300d1ce41db0468fb6c830a9dda 551 SUPERFAMILY SSF50182 379 445 2.19E-18 T 11-10-2018 IPR010920 LSM domain superfamily VSVS12_00927 4a539801d21f9bc89461a98cf40c43c6 383 Pfam PF01494 FAD binding domain 152 330 3.9E-20 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 VSVS12_00927 4a539801d21f9bc89461a98cf40c43c6 383 Pfam PF01494 FAD binding domain 4 75 8.8E-6 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 VSVS12_00927 4a539801d21f9bc89461a98cf40c43c6 383 SUPERFAMILY SSF51905 3 375 1.0E-56 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_00927 4a539801d21f9bc89461a98cf40c43c6 383 Gene3D G3DSA:3.50.50.60 2 250 3.7E-63 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_00927 4a539801d21f9bc89461a98cf40c43c6 383 Gene3D G3DSA:3.50.50.60 252 383 1.4E-33 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_00927 4a539801d21f9bc89461a98cf40c43c6 383 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 381 1.7E-117 T 11-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 VSVS12_00927 4a539801d21f9bc89461a98cf40c43c6 383 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 292 308 4.2E-19 T 11-10-2018 VSVS12_00927 4a539801d21f9bc89461a98cf40c43c6 383 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 4.2E-19 T 11-10-2018 VSVS12_00927 4a539801d21f9bc89461a98cf40c43c6 383 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 4.2E-19 T 11-10-2018 VSVS12_00927 4a539801d21f9bc89461a98cf40c43c6 383 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 277 292 4.2E-19 T 11-10-2018 VSVS12_03324 9d5a5fbafd8646ecd3885fc1085dd8f5 228 Pfam PF03475 3-alpha domain 173 215 1.2E-9 T 11-10-2018 IPR005163 3-alpha domain VSVS12_03324 9d5a5fbafd8646ecd3885fc1085dd8f5 228 SUPERFAMILY SSF50800 7 227 3.77E-69 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily VSVS12_03324 9d5a5fbafd8646ecd3885fc1085dd8f5 228 Pfam PF03473 MOSC domain 50 159 7.4E-18 T 11-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 VSVS12_03324 9d5a5fbafd8646ecd3885fc1085dd8f5 228 Gene3D G3DSA:2.40.33.20 3 228 1.6E-67 T 11-10-2018 VSVS12_01942 5f992e12f0e914854d7e767fea5a8bcd 365 Gene3D G3DSA:3.40.190.10 31 140 2.0E-19 T 11-10-2018 VSVS12_01942 5f992e12f0e914854d7e767fea5a8bcd 365 Gene3D G3DSA:3.40.190.10 326 362 3.2E-21 T 11-10-2018 VSVS12_01942 5f992e12f0e914854d7e767fea5a8bcd 365 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 34 363 5.0E-42 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VSVS12_01942 5f992e12f0e914854d7e767fea5a8bcd 365 SMART SM00062 33 365 1.7E-4 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VSVS12_01942 5f992e12f0e914854d7e767fea5a8bcd 365 SUPERFAMILY SSF81324 139 235 3.45E-5 T 11-10-2018 VSVS12_01942 5f992e12f0e914854d7e767fea5a8bcd 365 SUPERFAMILY SSF53850 34 363 2.99E-42 T 11-10-2018 VSVS12_01942 5f992e12f0e914854d7e767fea5a8bcd 365 Pfam PF00060 Ligand-gated ion channel 148 252 9.9E-9 T 11-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 VSVS12_01942 5f992e12f0e914854d7e767fea5a8bcd 365 Gene3D G3DSA:3.40.190.10 230 325 3.2E-21 T 11-10-2018 VSVS12_03584 95aeeb71c0646e5422032eebf46cefb8 227 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 194 3.9E-22 T 11-10-2018 VSVS12_03584 95aeeb71c0646e5422032eebf46cefb8 227 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 98 187 2.4E-14 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VSVS12_03584 95aeeb71c0646e5422032eebf46cefb8 227 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 3 222 5.3E-81 T 11-10-2018 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 VSVS12_03584 95aeeb71c0646e5422032eebf46cefb8 227 Gene3D G3DSA:1.10.150.240 16 95 9.3E-63 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VSVS12_03584 95aeeb71c0646e5422032eebf46cefb8 227 SUPERFAMILY SSF56784 2 222 9.01E-46 T 11-10-2018 IPR036412 HAD-like superfamily VSVS12_03584 95aeeb71c0646e5422032eebf46cefb8 227 Gene3D G3DSA:3.40.50.1000 5 218 9.3E-63 T 11-10-2018 IPR023214 HAD superfamily VSVS12_03584 95aeeb71c0646e5422032eebf46cefb8 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 1.8E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VSVS12_03584 95aeeb71c0646e5422032eebf46cefb8 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 184 197 1.8E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VSVS12_03584 95aeeb71c0646e5422032eebf46cefb8 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 1.8E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VSVS12_03584 95aeeb71c0646e5422032eebf46cefb8 227 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 1.8E-7 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VSVS12_02541 24b955a4495542ffb814f67f09f273f7 477 Pfam PF01235 Sodium:alanine symporter family 48 452 9.3E-163 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VSVS12_02541 24b955a4495542ffb814f67f09f273f7 477 PRINTS PR00175 Sodium/alanine symporter signature 410 430 2.2E-56 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VSVS12_02541 24b955a4495542ffb814f67f09f273f7 477 PRINTS PR00175 Sodium/alanine symporter signature 178 196 2.2E-56 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VSVS12_02541 24b955a4495542ffb814f67f09f273f7 477 PRINTS PR00175 Sodium/alanine symporter signature 303 321 2.2E-56 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VSVS12_02541 24b955a4495542ffb814f67f09f273f7 477 PRINTS PR00175 Sodium/alanine symporter signature 87 109 2.2E-56 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VSVS12_02541 24b955a4495542ffb814f67f09f273f7 477 PRINTS PR00175 Sodium/alanine symporter signature 206 225 2.2E-56 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VSVS12_02541 24b955a4495542ffb814f67f09f273f7 477 PRINTS PR00175 Sodium/alanine symporter signature 349 371 2.2E-56 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VSVS12_02541 24b955a4495542ffb814f67f09f273f7 477 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 441 3.0E-162 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VSVS12_02541 24b955a4495542ffb814f67f09f273f7 477 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 87 102 - T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VSVS12_01068 3829194abcb2ad2ca963e6cf79b9357c 164 Gene3D G3DSA:3.90.1170.40 13 162 4.5E-54 T 11-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 VSVS12_01068 3829194abcb2ad2ca963e6cf79b9357c 164 Pfam PF02391 MoaE protein 23 132 1.7E-36 T 11-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 VSVS12_01068 3829194abcb2ad2ca963e6cf79b9357c 164 SUPERFAMILY SSF54690 17 162 4.71E-55 T 11-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 VSVS12_01662 8326b20022373843281fb6a8f3b0a0df 598 Pfam PF00005 ABC transporter 376 524 2.7E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_01662 8326b20022373843281fb6a8f3b0a0df 598 Gene3D G3DSA:3.40.50.300 351 597 1.8E-82 T 11-10-2018 VSVS12_01662 8326b20022373843281fb6a8f3b0a0df 598 Gene3D G3DSA:1.20.1560.10 11 340 1.5E-53 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VSVS12_01662 8326b20022373843281fb6a8f3b0a0df 598 SUPERFAMILY SSF52540 356 592 1.38E-81 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01662 8326b20022373843281fb6a8f3b0a0df 598 SMART SM00382 385 572 1.1E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_01662 8326b20022373843281fb6a8f3b0a0df 598 SUPERFAMILY SSF90123 12 345 2.35E-53 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VSVS12_01662 8326b20022373843281fb6a8f3b0a0df 598 ProSitePatterns PS00211 ABC transporters family signature. 496 510 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_01662 8326b20022373843281fb6a8f3b0a0df 598 Pfam PF00664 ABC transporter transmembrane region 26 313 5.1E-30 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VSVS12_02835 b23d720106d54f15046e53203c668879 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 11-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VSVS12_02835 b23d720106d54f15046e53203c668879 470 Gene3D G3DSA:3.20.20.60 4 332 9.4E-145 T 11-10-2018 VSVS12_02835 b23d720106d54f15046e53203c668879 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 1.2E-183 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VSVS12_02835 b23d720106d54f15046e53203c668879 470 SUPERFAMILY SSF50800 70 167 1.92E-28 T 11-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily VSVS12_02835 b23d720106d54f15046e53203c668879 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 4.9E-79 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VSVS12_02835 b23d720106d54f15046e53203c668879 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 4.9E-79 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VSVS12_02835 b23d720106d54f15046e53203c668879 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 4.9E-79 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VSVS12_02835 b23d720106d54f15046e53203c668879 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 4.9E-79 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VSVS12_02835 b23d720106d54f15046e53203c668879 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 4.9E-79 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VSVS12_02835 b23d720106d54f15046e53203c668879 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 4.9E-79 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VSVS12_02835 b23d720106d54f15046e53203c668879 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 4.9E-79 T 11-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VSVS12_02835 b23d720106d54f15046e53203c668879 470 Gene3D G3DSA:2.40.33.10 71 167 9.4E-145 T 11-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VSVS12_02835 b23d720106d54f15046e53203c668879 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 340 2.8E-152 T 11-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VSVS12_02835 b23d720106d54f15046e53203c668879 470 Gene3D G3DSA:3.40.1380.20 337 467 2.1E-41 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VSVS12_02835 b23d720106d54f15046e53203c668879 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 5.6E-28 T 11-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VSVS12_02835 b23d720106d54f15046e53203c668879 470 SUPERFAMILY SSF52935 323 469 2.22E-33 T 11-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 VSVS12_02835 b23d720106d54f15046e53203c668879 470 SUPERFAMILY SSF51621 1 339 8.37E-101 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VSVS12_02138 659a24e2412703ab74f097b3c7f8b65c 353 Gene3D G3DSA:3.40.50.10800 115 340 3.6E-92 T 11-10-2018 VSVS12_02138 659a24e2412703ab74f097b3c7f8b65c 353 Gene3D G3DSA:3.40.50.10800 32 322 3.6E-92 T 11-10-2018 VSVS12_02138 659a24e2412703ab74f097b3c7f8b65c 353 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 31 341 1.9E-112 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 VSVS12_02138 659a24e2412703ab74f097b3c7f8b65c 353 Gene3D G3DSA:3.40.50.10800 200 295 3.6E-92 T 11-10-2018 VSVS12_02138 659a24e2412703ab74f097b3c7f8b65c 353 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 65.88 T 11-10-2018 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 VSVS12_02138 659a24e2412703ab74f097b3c7f8b65c 353 SUPERFAMILY SSF142754 29 341 1.96E-104 T 11-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 VSVS12_02138 659a24e2412703ab74f097b3c7f8b65c 353 Pfam PF02445 Quinolinate synthetase A protein 32 340 2.6E-100 T 11-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 VSVS12_00976 a683020828c9ab2c4755249c8df69b4a 434 SUPERFAMILY SSF117143 78 394 7.85E-68 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like VSVS12_00976 a683020828c9ab2c4755249c8df69b4a 434 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 355 433 2.3E-14 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VSVS12_00976 a683020828c9ab2c4755249c8df69b4a 434 Pfam PF07559 Flagellar basal body protein FlaE 181 314 1.2E-21 T 11-10-2018 IPR011491 Flagellar hook protein FlgE VSVS12_00976 a683020828c9ab2c4755249c8df69b4a 434 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 8 28 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site VSVS12_00976 a683020828c9ab2c4755249c8df69b4a 434 Pfam PF00460 Flagella basal body rod protein 3 32 7.4E-10 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VSVS12_00976 a683020828c9ab2c4755249c8df69b4a 434 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 2 416 1.0E-92 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VSVS12_00976 a683020828c9ab2c4755249c8df69b4a 434 Gene3D G3DSA:2.60.98.20 154 315 7.1E-22 T 11-10-2018 IPR037058 Flagellar hook protein FlgE superfamily VSVS12_01707 c9325b3cb18f55520a15cb2e28381359 65 TIGRFAM TIGR02811 formate_TAT: formate dehydrogenase region TAT target 1 65 3.3E-29 T 11-10-2018 IPR014177 Putative formate dehydrogenase, TAT signal-containing VSVS12_01707 c9325b3cb18f55520a15cb2e28381359 65 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 9 31 4.7E-5 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VSVS12_01707 c9325b3cb18f55520a15cb2e28381359 65 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 9 36 7.1E-5 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VSVS12_01707 c9325b3cb18f55520a15cb2e28381359 65 PIRSF PIRSF036704 1 65 1.1E-30 T 11-10-2018 IPR014177 Putative formate dehydrogenase, TAT signal-containing VSVS12_03298 3e07a6f8f49660b1703f78df0cdff59b 250 SUPERFAMILY SSF46785 7 61 4.61E-8 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_03298 3e07a6f8f49660b1703f78df0cdff59b 250 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 1.2E-14 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VSVS12_03298 3e07a6f8f49660b1703f78df0cdff59b 250 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 11-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VSVS12_03298 3e07a6f8f49660b1703f78df0cdff59b 250 Pfam PF00455 DeoR C terminal sensor domain 75 232 4.9E-42 T 11-10-2018 IPR014036 DeoR C-terminal sensor domain VSVS12_03298 3e07a6f8f49660b1703f78df0cdff59b 250 SMART SM00420 6 59 2.9E-14 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VSVS12_03298 3e07a6f8f49660b1703f78df0cdff59b 250 Gene3D G3DSA:1.10.10.10 1 60 6.8E-10 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_03298 3e07a6f8f49660b1703f78df0cdff59b 250 SUPERFAMILY SSF100950 74 233 7.03E-26 T 11-10-2018 IPR037171 NagB/RpiA transferase-like VSVS12_03298 3e07a6f8f49660b1703f78df0cdff59b 250 SMART SM01134 72 233 4.8E-50 T 11-10-2018 VSVS12_01987 86e5bb826ec68734d64d523f6e84065a 119 Gene3D G3DSA:3.40.50.2300 10 117 8.8E-9 T 11-10-2018 VSVS12_01987 86e5bb826ec68734d64d523f6e84065a 119 SUPERFAMILY SSF52794 12 115 1.83E-6 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VSVS12_01062 a78ada9919c0cc849ed5e9b85c671f95 118 Pfam PF01627 Hpt domain 30 105 6.4E-9 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VSVS12_01062 a78ada9919c0cc849ed5e9b85c671f95 118 Gene3D G3DSA:1.20.120.160 3 115 3.3E-21 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 VSVS12_01062 a78ada9919c0cc849ed5e9b85c671f95 118 SUPERFAMILY SSF47226 8 115 1.24E-18 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 VSVS12_00262 2d2e755f4005f0d5b81792596d76002d 306 SUPERFAMILY SSF102886 6 306 3.27E-134 T 11-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VSVS12_00262 2d2e755f4005f0d5b81792596d76002d 306 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 171 195 - T 11-10-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VSVS12_00262 2d2e755f4005f0d5b81792596d76002d 306 Gene3D G3DSA:3.40.1500.10 1 306 3.7E-132 T 11-10-2018 IPR036406 Oxygen-dependent coproporphyrinogen III oxidase superfamily GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VSVS12_00262 2d2e755f4005f0d5b81792596d76002d 306 PRINTS PR00073 Coprogen oxidase signature 95 119 2.2E-69 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VSVS12_00262 2d2e755f4005f0d5b81792596d76002d 306 PRINTS PR00073 Coprogen oxidase signature 32 48 2.2E-69 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VSVS12_00262 2d2e755f4005f0d5b81792596d76002d 306 PRINTS PR00073 Coprogen oxidase signature 130 152 2.2E-69 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VSVS12_00262 2d2e755f4005f0d5b81792596d76002d 306 PRINTS PR00073 Coprogen oxidase signature 239 266 2.2E-69 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VSVS12_00262 2d2e755f4005f0d5b81792596d76002d 306 PRINTS PR00073 Coprogen oxidase signature 167 196 2.2E-69 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VSVS12_00262 2d2e755f4005f0d5b81792596d76002d 306 PRINTS PR00073 Coprogen oxidase signature 267 293 2.2E-69 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VSVS12_00262 2d2e755f4005f0d5b81792596d76002d 306 Pfam PF01218 Coproporphyrinogen III oxidase 10 306 1.2E-127 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VSVS12_00262 2d2e755f4005f0d5b81792596d76002d 306 PIRSF PIRSF000166 2 306 2.0E-123 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VSVS12_00262 2d2e755f4005f0d5b81792596d76002d 306 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 4 282 55.222 T 11-10-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 VSVS12_01097 be116eb873a5f70c1b1c11382d3d90f5 440 Gene3D G3DSA:3.50.50.60 111 436 3.8E-147 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_01097 be116eb873a5f70c1b1c11382d3d90f5 440 SUPERFAMILY SSF51905 1 313 1.85E-40 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_01097 be116eb873a5f70c1b1c11382d3d90f5 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 2 24 3.1E-15 T 11-10-2018 VSVS12_01097 be116eb873a5f70c1b1c11382d3d90f5 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 149 174 3.1E-15 T 11-10-2018 VSVS12_01097 be116eb873a5f70c1b1c11382d3d90f5 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 273 280 3.1E-15 T 11-10-2018 VSVS12_01097 be116eb873a5f70c1b1c11382d3d90f5 440 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 3.1E-15 T 11-10-2018 VSVS12_01097 be116eb873a5f70c1b1c11382d3d90f5 440 SUPERFAMILY SSF55424 319 438 3.61E-30 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VSVS12_01097 be116eb873a5f70c1b1c11382d3d90f5 440 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 327 428 1.6E-15 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VSVS12_01097 be116eb873a5f70c1b1c11382d3d90f5 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 1.2E-20 T 11-10-2018 VSVS12_01097 be116eb873a5f70c1b1c11382d3d90f5 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 1.2E-20 T 11-10-2018 VSVS12_01097 be116eb873a5f70c1b1c11382d3d90f5 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 1.2E-20 T 11-10-2018 VSVS12_01097 be116eb873a5f70c1b1c11382d3d90f5 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 1.2E-20 T 11-10-2018 VSVS12_01097 be116eb873a5f70c1b1c11382d3d90f5 440 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 280 1.2E-20 T 11-10-2018 VSVS12_01097 be116eb873a5f70c1b1c11382d3d90f5 440 Gene3D G3DSA:3.50.50.60 2 336 3.8E-147 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_01097 be116eb873a5f70c1b1c11382d3d90f5 440 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 1 303 5.5E-53 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VSVS12_03724 af8b88d3eb5967f57afe31bb177729ac 1013 Pfam PF00990 Diguanylate cyclase, GGDEF domain 579 733 3.3E-43 T 11-10-2018 IPR000160 GGDEF domain VSVS12_03724 af8b88d3eb5967f57afe31bb177729ac 1013 SUPERFAMILY SSF141868 754 996 5.89E-77 T 11-10-2018 IPR035919 EAL domain superfamily VSVS12_03724 af8b88d3eb5967f57afe31bb177729ac 1013 SUPERFAMILY SSF53822 10 277 3.43E-45 T 11-10-2018 IPR028082 Periplasmic binding protein-like I VSVS12_03724 af8b88d3eb5967f57afe31bb177729ac 1013 SMART SM00052 747 992 2.5E-88 T 11-10-2018 IPR001633 EAL domain VSVS12_03724 af8b88d3eb5967f57afe31bb177729ac 1013 SMART SM00267 568 737 1.4E-53 T 11-10-2018 IPR000160 GGDEF domain VSVS12_03724 af8b88d3eb5967f57afe31bb177729ac 1013 SMART SM00086 526 568 3.2E-4 T 11-10-2018 IPR001610 PAC motif VSVS12_03724 af8b88d3eb5967f57afe31bb177729ac 1013 Gene3D G3DSA:3.30.450.20 443 564 1.8E-18 T 11-10-2018 VSVS12_03724 af8b88d3eb5967f57afe31bb177729ac 1013 SMART SM00091 450 520 2.1E-4 T 11-10-2018 IPR000014 PAS domain VSVS12_03724 af8b88d3eb5967f57afe31bb177729ac 1013 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 451 574 1.4E-6 T 11-10-2018 IPR000014 PAS domain VSVS12_03724 af8b88d3eb5967f57afe31bb177729ac 1013 SUPERFAMILY SSF55073 584 738 1.26E-45 T 11-10-2018 IPR029787 Nucleotide cyclase VSVS12_03724 af8b88d3eb5967f57afe31bb177729ac 1013 Gene3D G3DSA:3.30.70.270 573 750 1.1E-56 T 11-10-2018 VSVS12_03724 af8b88d3eb5967f57afe31bb177729ac 1013 Pfam PF13377 Periplasmic binding protein-like domain 115 274 2.9E-28 T 11-10-2018 VSVS12_03724 af8b88d3eb5967f57afe31bb177729ac 1013 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 576 735 1.6E-37 T 11-10-2018 IPR000160 GGDEF domain VSVS12_03724 af8b88d3eb5967f57afe31bb177729ac 1013 Pfam PF00563 EAL domain 755 987 2.8E-64 T 11-10-2018 IPR001633 EAL domain VSVS12_03724 af8b88d3eb5967f57afe31bb177729ac 1013 Gene3D G3DSA:3.40.50.2300 105 234 1.1E-44 T 11-10-2018 VSVS12_03724 af8b88d3eb5967f57afe31bb177729ac 1013 Gene3D G3DSA:3.40.50.2300 10 251 1.1E-44 T 11-10-2018 VSVS12_03724 af8b88d3eb5967f57afe31bb177729ac 1013 SUPERFAMILY SSF55785 457 570 1.92E-16 T 11-10-2018 IPR035965 PAS domain superfamily VSVS12_03724 af8b88d3eb5967f57afe31bb177729ac 1013 Gene3D G3DSA:3.20.20.450 751 1000 6.2E-81 T 11-10-2018 IPR035919 EAL domain superfamily VSVS12_03724 af8b88d3eb5967f57afe31bb177729ac 1013 Pfam PF08447 PAS fold 474 560 1.7E-7 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 VSVS12_02416 2fb2166ef80f5bf25c5b344c0294489a 425 SUPERFAMILY SSF118215 5 406 6.15E-106 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VSVS12_02416 2fb2166ef80f5bf25c5b344c0294489a 425 Gene3D G3DSA:1.10.3860.10 1 410 2.1E-113 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VSVS12_02416 2fb2166ef80f5bf25c5b344c0294489a 425 Pfam PF00375 Sodium:dicarboxylate symporter family 6 404 1.9E-114 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 VSVS12_02416 2fb2166ef80f5bf25c5b344c0294489a 425 PRINTS PR00173 Glutamate-aspartate symporter signature 297 323 4.8E-39 T 11-10-2018 VSVS12_02416 2fb2166ef80f5bf25c5b344c0294489a 425 PRINTS PR00173 Glutamate-aspartate symporter signature 195 214 4.8E-39 T 11-10-2018 VSVS12_02416 2fb2166ef80f5bf25c5b344c0294489a 425 PRINTS PR00173 Glutamate-aspartate symporter signature 230 249 4.8E-39 T 11-10-2018 VSVS12_02416 2fb2166ef80f5bf25c5b344c0294489a 425 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 4.8E-39 T 11-10-2018 VSVS12_02416 2fb2166ef80f5bf25c5b344c0294489a 425 PRINTS PR00173 Glutamate-aspartate symporter signature 332 351 4.8E-39 T 11-10-2018 VSVS12_02416 2fb2166ef80f5bf25c5b344c0294489a 425 PRINTS PR00173 Glutamate-aspartate symporter signature 148 170 4.8E-39 T 11-10-2018 VSVS12_02416 2fb2166ef80f5bf25c5b344c0294489a 425 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 4.8E-39 T 11-10-2018 VSVS12_02416 2fb2166ef80f5bf25c5b344c0294489a 425 PRINTS PR00173 Glutamate-aspartate symporter signature 359 379 4.8E-39 T 11-10-2018 VSVS12_02416 2fb2166ef80f5bf25c5b344c0294489a 425 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 4.8E-39 T 11-10-2018 VSVS12_02109 43a38473db65c8454ceb4441ac2ecc67 792 Gene3D G3DSA:1.10.287.130 240 330 2.5E-24 T 11-10-2018 VSVS12_02109 43a38473db65c8454ceb4441ac2ecc67 792 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 432 1.1E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_02109 43a38473db65c8454ceb4441ac2ecc67 792 PRINTS PR00344 Bacterial sensor protein C-terminal signature 477 490 1.1E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_02109 43a38473db65c8454ceb4441ac2ecc67 792 PRINTS PR00344 Bacterial sensor protein C-terminal signature 436 446 1.1E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_02109 43a38473db65c8454ceb4441ac2ecc67 792 PRINTS PR00344 Bacterial sensor protein C-terminal signature 453 471 1.1E-15 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_02109 43a38473db65c8454ceb4441ac2ecc67 792 Gene3D G3DSA:3.40.50.2300 499 638 1.2E-31 T 11-10-2018 VSVS12_02109 43a38473db65c8454ceb4441ac2ecc67 792 Gene3D G3DSA:1.20.120.160 665 775 4.2E-11 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 VSVS12_02109 43a38473db65c8454ceb4441ac2ecc67 792 SUPERFAMILY SSF55874 321 491 4.06E-46 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_02109 43a38473db65c8454ceb4441ac2ecc67 792 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 379 492 9.2E-32 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_02109 43a38473db65c8454ceb4441ac2ecc67 792 Pfam PF00512 His Kinase A (phospho-acceptor) domain 267 331 1.2E-15 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_02109 43a38473db65c8454ceb4441ac2ecc67 792 SMART SM00448 515 627 1.2E-20 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_02109 43a38473db65c8454ceb4441ac2ecc67 792 SMART SM00387 379 493 3.5E-38 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_02109 43a38473db65c8454ceb4441ac2ecc67 792 Pfam PF01627 Hpt domain 684 758 4.9E-6 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VSVS12_02109 43a38473db65c8454ceb4441ac2ecc67 792 Pfam PF00072 Response regulator receiver domain 517 627 1.1E-17 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_02109 43a38473db65c8454ceb4441ac2ecc67 792 SUPERFAMILY SSF47226 611 755 2.49E-13 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 VSVS12_02109 43a38473db65c8454ceb4441ac2ecc67 792 SMART SM00388 267 332 3.3E-18 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_02109 43a38473db65c8454ceb4441ac2ecc67 792 SUPERFAMILY SSF47384 252 333 5.49E-18 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VSVS12_02109 43a38473db65c8454ceb4441ac2ecc67 792 SUPERFAMILY SSF52172 513 639 1.05E-29 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_02109 43a38473db65c8454ceb4441ac2ecc67 792 Gene3D G3DSA:3.30.565.10 332 496 3.6E-48 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_02625 30970560de25f2c79bf756ead0570cc6 161 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 153 1.9E-66 T 11-10-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 VSVS12_02625 30970560de25f2c79bf756ead0570cc6 161 Gene3D G3DSA:3.50.30.40 1 160 3.0E-63 T 11-10-2018 VSVS12_02625 30970560de25f2c79bf756ead0570cc6 161 SUPERFAMILY SSF89562 1 155 8.76E-47 T 11-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily VSVS12_02625 30970560de25f2c79bf756ead0570cc6 161 Pfam PF03737 Aldolase/RraA 5 152 1.6E-41 T 11-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein VSVS12_02418 374a2c8cceda6b804a425811c68dbf22 201 SUPERFAMILY SSF51064 146 201 2.88E-19 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 VSVS12_02418 374a2c8cceda6b804a425811c68dbf22 201 Pfam PF01025 GrpE 41 201 4.3E-56 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VSVS12_02418 374a2c8cceda6b804a425811c68dbf22 201 Gene3D G3DSA:2.30.22.10 145 201 3.1E-25 T 11-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 VSVS12_02418 374a2c8cceda6b804a425811c68dbf22 201 Hamap MF_01151 Protein GrpE [grpE]. 4 201 22.491 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VSVS12_02418 374a2c8cceda6b804a425811c68dbf22 201 SUPERFAMILY SSF58014 47 145 3.92E-30 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 VSVS12_02418 374a2c8cceda6b804a425811c68dbf22 201 PRINTS PR00773 GrpE protein signature 98 113 6.8E-29 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VSVS12_02418 374a2c8cceda6b804a425811c68dbf22 201 PRINTS PR00773 GrpE protein signature 180 199 6.8E-29 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VSVS12_02418 374a2c8cceda6b804a425811c68dbf22 201 PRINTS PR00773 GrpE protein signature 153 168 6.8E-29 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VSVS12_02418 374a2c8cceda6b804a425811c68dbf22 201 PRINTS PR00773 GrpE protein signature 70 86 6.8E-29 T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VSVS12_02418 374a2c8cceda6b804a425811c68dbf22 201 ProSitePatterns PS01071 grpE protein signature. 156 199 - T 11-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 VSVS12_02418 374a2c8cceda6b804a425811c68dbf22 201 Gene3D G3DSA:3.90.20.20 39 144 5.1E-33 T 11-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 VSVS12_02085 aae450b1292aa833e323044845b8a24b 350 PIRSF PIRSF001619 1 318 3.8E-137 T 11-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VSVS12_02085 aae450b1292aa833e323044845b8a24b 350 SMART SM00729 43 255 1.2E-40 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VSVS12_02085 aae450b1292aa833e323044845b8a24b 350 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.544 T 11-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VSVS12_02085 aae450b1292aa833e323044845b8a24b 350 Gene3D G3DSA:3.20.20.70 4 315 1.6E-130 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_02085 aae450b1292aa833e323044845b8a24b 350 SMART SM00876 220 312 2.3E-44 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VSVS12_02085 aae450b1292aa833e323044845b8a24b 350 SUPERFAMILY SSF102114 5 310 1.7E-88 T 11-10-2018 VSVS12_02085 aae450b1292aa833e323044845b8a24b 350 Pfam PF04055 Radical SAM superfamily 50 201 5.8E-15 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VSVS12_02085 aae450b1292aa833e323044845b8a24b 350 TIGRFAM TIGR00433 bioB: biotin synthase 14 310 8.7E-124 T 11-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VSVS12_02085 aae450b1292aa833e323044845b8a24b 350 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 1.1E-20 T 11-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 VSVS12_04461 597f3e45e06cc16f126a1444c14d08b9 176 Pfam PF04002 RadC-like JAB domain 57 174 5.2E-42 T 11-10-2018 IPR025657 RadC-like JAB domain VSVS12_04461 597f3e45e06cc16f126a1444c14d08b9 176 Gene3D G3DSA:3.40.140.10 54 176 9.9E-40 T 11-10-2018 VSVS12_04461 597f3e45e06cc16f126a1444c14d08b9 176 SUPERFAMILY SSF102712 69 143 1.02E-5 T 11-10-2018 VSVS12_04461 597f3e45e06cc16f126a1444c14d08b9 176 TIGRFAM TIGR00608 radc: DNA repair protein RadC 40 176 2.7E-43 T 11-10-2018 IPR001405 Uncharacterised protein family UPF0758 VSVS12_04461 597f3e45e06cc16f126a1444c14d08b9 176 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 126 131 - T 11-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site VSVS12_02649 6ffbfd82668cc03bb4cf60af2068af02 225 SMART SM00358 155 223 1.8E-21 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain VSVS12_02649 6ffbfd82668cc03bb4cf60af2068af02 225 Hamap MF_00104 Ribonuclease 3 [rnc]. 8 219 29.789 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 VSVS12_02649 6ffbfd82668cc03bb4cf60af2068af02 225 Gene3D G3DSA:1.10.1520.10 3 146 1.2E-42 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 VSVS12_02649 6ffbfd82668cc03bb4cf60af2068af02 225 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 8 222 5.3E-75 T 11-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 VSVS12_02649 6ffbfd82668cc03bb4cf60af2068af02 225 Pfam PF00035 Double-stranded RNA binding motif 155 222 2.8E-15 T 11-10-2018 IPR014720 Double-stranded RNA-binding domain VSVS12_02649 6ffbfd82668cc03bb4cf60af2068af02 225 SMART SM00535 20 148 2.0E-54 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 VSVS12_02649 6ffbfd82668cc03bb4cf60af2068af02 225 SUPERFAMILY SSF54768 108 222 1.73E-28 T 11-10-2018 VSVS12_02649 6ffbfd82668cc03bb4cf60af2068af02 225 Gene3D G3DSA:3.30.160.20 147 225 7.4E-20 T 11-10-2018 VSVS12_02649 6ffbfd82668cc03bb4cf60af2068af02 225 Pfam PF14622 Ribonuclease-III-like 19 140 2.0E-32 T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 VSVS12_02649 6ffbfd82668cc03bb4cf60af2068af02 225 SUPERFAMILY SSF69065 5 158 1.64E-49 T 11-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 VSVS12_02649 6ffbfd82668cc03bb4cf60af2068af02 225 ProSitePatterns PS00517 Ribonuclease III family signature. 37 45 - T 11-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 VSVS12_03440 60af6e7a624e2f685eb71f1b2ec2b0eb 410 Gene3D G3DSA:3.40.190.10 21 367 1.5E-119 T 11-10-2018 VSVS12_03440 60af6e7a624e2f685eb71f1b2ec2b0eb 410 SUPERFAMILY SSF53850 20 405 1.79E-39 T 11-10-2018 VSVS12_03440 60af6e7a624e2f685eb71f1b2ec2b0eb 410 Pfam PF13416 Bacterial extracellular solute-binding protein 59 342 2.6E-13 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein VSVS12_03440 60af6e7a624e2f685eb71f1b2ec2b0eb 410 Gene3D G3DSA:3.40.190.10 136 387 1.5E-119 T 11-10-2018 VSVS12_00493 2ac7cad9d471ae9a83d1efe3979437c1 118 PIRSF PIRSF002134 1 118 2.9E-41 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00493 2ac7cad9d471ae9a83d1efe3979437c1 118 SUPERFAMILY SSF46946 2 114 4.04E-45 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 VSVS12_00493 2ac7cad9d471ae9a83d1efe3979437c1 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 1.8E-53 T 11-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00493 2ac7cad9d471ae9a83d1efe3979437c1 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 4.6E-32 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00493 2ac7cad9d471ae9a83d1efe3979437c1 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 27.128 T 11-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00493 2ac7cad9d471ae9a83d1efe3979437c1 118 Gene3D G3DSA:4.10.910.10 72 118 1.3E-26 T 11-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00493 2ac7cad9d471ae9a83d1efe3979437c1 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 11-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00493 2ac7cad9d471ae9a83d1efe3979437c1 118 Gene3D G3DSA:1.10.8.50 1 71 3.5E-28 T 11-10-2018 VSVS12_02572 8ff3af2a6797c634cbb2c824cab6f38e 120 Pfam PF02021 Uncharacterised protein family UPF0102 12 103 6.2E-26 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 VSVS12_02572 8ff3af2a6797c634cbb2c824cab6f38e 120 Gene3D G3DSA:3.40.1350.10 11 120 1.1E-29 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 VSVS12_02572 8ff3af2a6797c634cbb2c824cab6f38e 120 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 7 118 6.3E-35 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 VSVS12_02572 8ff3af2a6797c634cbb2c824cab6f38e 120 Hamap MF_00048 UPF0102 protein YraN [yraN]. 4 116 22.233 T 11-10-2018 IPR003509 Uncharacterised protein family UPF0102 VSVS12_02572 8ff3af2a6797c634cbb2c824cab6f38e 120 SUPERFAMILY SSF52980 6 110 2.15E-19 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VSVS12_03829 a8cc7b39c35226d385c65eef7e815af5 706 Gene3D G3DSA:3.20.70.20 121 687 1.2E-232 T 11-10-2018 VSVS12_03829 a8cc7b39c35226d385c65eef7e815af5 706 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 115 705 6.6E-201 T 11-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 VSVS12_03829 a8cc7b39c35226d385c65eef7e815af5 706 SUPERFAMILY SSF51998 121 687 1.71E-193 T 11-10-2018 VSVS12_03829 a8cc7b39c35226d385c65eef7e815af5 706 ProSitePatterns PS00850 Glycine radical domain signature. 676 684 - T 11-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VSVS12_03829 a8cc7b39c35226d385c65eef7e815af5 706 Pfam PF03477 ATP cone domain 4 89 8.1E-20 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 VSVS12_03829 a8cc7b39c35226d385c65eef7e815af5 706 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 116 705 4.9E-183 T 11-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 VSVS12_01696 7edee942d0c4f89efc2ac40720e119cf 379 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_01696 7edee942d0c4f89efc2ac40720e119cf 379 SUPERFAMILY SSF50331 253 374 5.33E-8 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VSVS12_01696 7edee942d0c4f89efc2ac40720e119cf 379 Gene3D G3DSA:2.40.50.940 238 300 1.7E-11 T 11-10-2018 VSVS12_01696 7edee942d0c4f89efc2ac40720e119cf 379 Pfam PF08402 TOBE domain 294 373 3.0E-11 T 11-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VSVS12_01696 7edee942d0c4f89efc2ac40720e119cf 379 SMART SM00382 44 227 7.6E-21 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_01696 7edee942d0c4f89efc2ac40720e119cf 379 SUPERFAMILY SSF52540 20 259 1.16E-88 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01696 7edee942d0c4f89efc2ac40720e119cf 379 Gene3D G3DSA:3.40.50.300 19 237 1.0E-69 T 11-10-2018 VSVS12_01696 7edee942d0c4f89efc2ac40720e119cf 379 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 50 373 2.4E-155 T 11-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 VSVS12_01696 7edee942d0c4f89efc2ac40720e119cf 379 Pfam PF00005 ABC transporter 37 176 1.5E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_01696 7edee942d0c4f89efc2ac40720e119cf 379 Gene3D G3DSA:2.40.50.140 301 318 1.7E-11 T 11-10-2018 VSVS12_00601 29f8744b24af64bd59a7a6dde0ee931f 185 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_00601 29f8744b24af64bd59a7a6dde0ee931f 185 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 25 1.1E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_00601 29f8744b24af64bd59a7a6dde0ee931f 185 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 24 5.3E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_03166 d87a73e12c5e09c87537631a74e950f4 302 SUPERFAMILY SSF100950 126 282 1.15E-18 T 11-10-2018 IPR037171 NagB/RpiA transferase-like VSVS12_03166 d87a73e12c5e09c87537631a74e950f4 302 ProSitePatterns PS00894 DeoR-type HTH domain signature. 50 84 - T 11-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VSVS12_03166 d87a73e12c5e09c87537631a74e950f4 302 SMART SM01134 125 283 9.4E-34 T 11-10-2018 VSVS12_03166 d87a73e12c5e09c87537631a74e950f4 302 Gene3D G3DSA:1.10.10.10 35 99 3.0E-5 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_03166 d87a73e12c5e09c87537631a74e950f4 302 Pfam PF08220 DeoR-like helix-turn-helix domain 50 103 5.1E-15 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VSVS12_03166 d87a73e12c5e09c87537631a74e950f4 302 SMART SM00420 50 102 1.2E-13 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VSVS12_03166 d87a73e12c5e09c87537631a74e950f4 302 SUPERFAMILY SSF46785 49 105 3.47E-10 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_03166 d87a73e12c5e09c87537631a74e950f4 302 Pfam PF00455 DeoR C terminal sensor domain 127 282 1.3E-31 T 11-10-2018 IPR014036 DeoR C-terminal sensor domain VSVS12_03166 d87a73e12c5e09c87537631a74e950f4 302 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 68 82 3.6E-5 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VSVS12_03166 d87a73e12c5e09c87537631a74e950f4 302 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 82 100 3.6E-5 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VSVS12_04119 5932702083adf418dfb3af41a18651e5 332 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 123 330 1.1E-31 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VSVS12_04119 5932702083adf418dfb3af41a18651e5 332 Gene3D G3DSA:1.10.3720.10 94 325 4.5E-23 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_04119 5932702083adf418dfb3af41a18651e5 332 SUPERFAMILY SSF161098 103 313 9.94E-21 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_03982 f263c580712393b4b777de0e10a231da 592 SUPERFAMILY SSF55785 52 161 6.63E-14 T 11-10-2018 IPR035965 PAS domain superfamily VSVS12_03982 f263c580712393b4b777de0e10a231da 592 Gene3D G3DSA:3.30.70.270 173 341 1.3E-11 T 11-10-2018 VSVS12_03982 f263c580712393b4b777de0e10a231da 592 SMART SM00267 160 329 1.2E-4 T 11-10-2018 IPR000160 GGDEF domain VSVS12_03982 f263c580712393b4b777de0e10a231da 592 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 48 162 3.5E-7 T 11-10-2018 IPR000014 PAS domain VSVS12_03982 f263c580712393b4b777de0e10a231da 592 SUPERFAMILY SSF55073 179 330 5.1E-10 T 11-10-2018 IPR029787 Nucleotide cyclase VSVS12_03982 f263c580712393b4b777de0e10a231da 592 Pfam PF08447 PAS fold 70 137 8.5E-9 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 VSVS12_03982 f263c580712393b4b777de0e10a231da 592 Gene3D G3DSA:3.20.20.450 342 590 7.5E-74 T 11-10-2018 IPR035919 EAL domain superfamily VSVS12_03982 f263c580712393b4b777de0e10a231da 592 SMART SM00052 339 585 8.4E-68 T 11-10-2018 IPR001633 EAL domain VSVS12_03982 f263c580712393b4b777de0e10a231da 592 Gene3D G3DSA:3.30.450.20 46 157 6.0E-13 T 11-10-2018 VSVS12_03982 f263c580712393b4b777de0e10a231da 592 SUPERFAMILY SSF141868 344 584 1.44E-68 T 11-10-2018 IPR035919 EAL domain superfamily VSVS12_03982 f263c580712393b4b777de0e10a231da 592 Pfam PF00563 EAL domain 345 580 1.5E-60 T 11-10-2018 IPR001633 EAL domain VSVS12_04362 67a644861b0f513e612b7305e1543091 266 Pfam PF13411 MerR HTH family regulatory protein 8 76 8.3E-19 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VSVS12_04362 67a644861b0f513e612b7305e1543091 266 SMART SM00422 8 77 4.3E-18 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VSVS12_04362 67a644861b0f513e612b7305e1543091 266 Gene3D G3DSA:1.10.1660.10 3 76 3.1E-25 T 11-10-2018 VSVS12_04362 67a644861b0f513e612b7305e1543091 266 SUPERFAMILY SSF46955 8 103 1.37E-18 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily VSVS12_03694 d37574514dbd6d061482809991371e1f 301 Gene3D G3DSA:3.40.50.1980 27 280 8.9E-86 T 11-10-2018 VSVS12_03694 d37574514dbd6d061482809991371e1f 301 Pfam PF01497 Periplasmic binding protein 43 277 5.3E-31 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain VSVS12_03694 d37574514dbd6d061482809991371e1f 301 Gene3D G3DSA:3.40.50.1980 171 274 8.9E-86 T 11-10-2018 VSVS12_03694 d37574514dbd6d061482809991371e1f 301 SUPERFAMILY SSF53807 20 292 4.32E-65 T 11-10-2018 VSVS12_03027 2d0311d6bffe5f52e6ff874b2c9d1e21 230 SUPERFAMILY SSF53720 11 178 7.01E-10 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VSVS12_03027 2d0311d6bffe5f52e6ff874b2c9d1e21 230 Gene3D G3DSA:3.40.605.10 35 220 6.3E-6 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VSVS12_02931 9cc1067a1c262369e50b93c970c4895b 212 Gene3D G3DSA:1.10.357.10 1 210 3.5E-66 T 11-10-2018 VSVS12_02931 9cc1067a1c262369e50b93c970c4895b 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 1.2E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VSVS12_02931 9cc1067a1c262369e50b93c970c4895b 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 1.2E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VSVS12_02931 9cc1067a1c262369e50b93c970c4895b 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 53 4.4E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VSVS12_02931 9cc1067a1c262369e50b93c970c4895b 212 SUPERFAMILY SSF46689 2 71 4.61E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_02931 9cc1067a1c262369e50b93c970c4895b 212 Pfam PF13972 Bacterial transcriptional repressor 57 199 2.0E-41 T 11-10-2018 IPR025722 Bacterial transcriptional repressor TetR VSVS12_01906 49b30a4a2d8a7caa12af57480b2b7af6 451 SMART SM00364 58 77 250.0 T 11-10-2018 VSVS12_01906 49b30a4a2d8a7caa12af57480b2b7af6 451 SMART SM00364 35 54 11.0 T 11-10-2018 VSVS12_01906 49b30a4a2d8a7caa12af57480b2b7af6 451 SMART SM00364 126 145 10.0 T 11-10-2018 VSVS12_01906 49b30a4a2d8a7caa12af57480b2b7af6 451 SMART SM00364 103 122 190.0 T 11-10-2018 VSVS12_01906 49b30a4a2d8a7caa12af57480b2b7af6 451 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 217 247 - T 11-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 VSVS12_01906 49b30a4a2d8a7caa12af57480b2b7af6 451 Gene3D G3DSA:3.30.200.20 200 295 9.9E-10 T 11-10-2018 VSVS12_01906 49b30a4a2d8a7caa12af57480b2b7af6 451 SMART SM00369 37 57 47.0 T 11-10-2018 IPR003591 Leucine-rich repeat, typical subtype VSVS12_01906 49b30a4a2d8a7caa12af57480b2b7af6 451 SMART SM00369 58 81 3.8 T 11-10-2018 IPR003591 Leucine-rich repeat, typical subtype VSVS12_01906 49b30a4a2d8a7caa12af57480b2b7af6 451 SMART SM00369 126 149 0.29 T 11-10-2018 IPR003591 Leucine-rich repeat, typical subtype VSVS12_01906 49b30a4a2d8a7caa12af57480b2b7af6 451 SMART SM00369 82 104 140.0 T 11-10-2018 IPR003591 Leucine-rich repeat, typical subtype VSVS12_01906 49b30a4a2d8a7caa12af57480b2b7af6 451 SMART SM00369 150 172 150.0 T 11-10-2018 IPR003591 Leucine-rich repeat, typical subtype VSVS12_01906 49b30a4a2d8a7caa12af57480b2b7af6 451 Gene3D G3DSA:3.80.10.10 7 103 3.8E-16 T 11-10-2018 IPR032675 Leucine-rich repeat domain superfamily VSVS12_01906 49b30a4a2d8a7caa12af57480b2b7af6 451 Gene3D G3DSA:3.80.10.10 104 194 1.1E-21 T 11-10-2018 IPR032675 Leucine-rich repeat domain superfamily VSVS12_01906 49b30a4a2d8a7caa12af57480b2b7af6 451 SUPERFAMILY SSF56112 206 446 1.89E-27 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily VSVS12_01906 49b30a4a2d8a7caa12af57480b2b7af6 451 Gene3D G3DSA:1.10.510.10 314 449 3.4E-17 T 11-10-2018 VSVS12_01906 49b30a4a2d8a7caa12af57480b2b7af6 451 Pfam PF13855 Leucine rich repeat 128 185 3.5E-8 T 11-10-2018 IPR001611 Leucine-rich repeat GO:0005515 VSVS12_01906 49b30a4a2d8a7caa12af57480b2b7af6 451 SUPERFAMILY SSF52058 12 188 1.25E-36 T 11-10-2018 VSVS12_01906 49b30a4a2d8a7caa12af57480b2b7af6 451 Pfam PF07714 Protein tyrosine kinase 212 387 6.1E-17 T 11-10-2018 IPR001245 Serine-threonine/tyrosine-protein kinase, catalytic domain GO:0004672|GO:0006468 VSVS12_04152 fd5c66f853b77c71cca9244ec8c001f1 557 Pfam PF13584 Oxygen tolerance 24 460 7.3E-66 T 11-10-2018 IPR025738 Aerotolerance-related protein BatD VSVS12_02926 f0bbfd0bb5b9f3043bd9af5856e8fce0 467 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 38 461 1.6E-79 T 11-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VSVS12_02926 f0bbfd0bb5b9f3043bd9af5856e8fce0 467 Pfam PF00939 Sodium:sulfate symporter transmembrane region 12 462 3.4E-47 T 11-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VSVS12_00245 bf75a56968af99648e9eca3ed99872d4 472 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 274 285 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VSVS12_00245 bf75a56968af99648e9eca3ed99872d4 472 Pfam PF13746 4Fe-4S dicluster domain 222 326 8.8E-42 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VSVS12_00245 bf75a56968af99648e9eca3ed99872d4 472 SUPERFAMILY SSF54862 107 345 4.19E-33 T 11-10-2018 VSVS12_00245 bf75a56968af99648e9eca3ed99872d4 472 Pfam PF12801 4Fe-4S binding domain 97 136 6.5E-9 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VSVS12_00245 bf75a56968af99648e9eca3ed99872d4 472 Gene3D G3DSA:2.60.40.10 357 472 2.4E-44 T 11-10-2018 IPR013783 Immunoglobulin-like fold VSVS12_00245 bf75a56968af99648e9eca3ed99872d4 472 Gene3D G3DSA:3.30.70.20 220 293 3.4E-5 T 11-10-2018 VSVS12_00245 bf75a56968af99648e9eca3ed99872d4 472 Pfam PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase 356 469 1.1E-31 T 11-10-2018 IPR032879 FixG, C-terminal immunoglobulin-like domain VSVS12_00245 bf75a56968af99648e9eca3ed99872d4 472 TIGRFAM TIGR02745 ccoG_rdxA_fixG: cytochrome c oxidase accessory protein CcoG 43 470 2.5E-172 T 11-10-2018 IPR014116 Cytochrome c oxidase cbb3 type, accessory protein FixG GO:0016021|GO:0055114 VSVS12_01659 efadbb0cf7a954670db3810bc3aa1dc2 473 Gene3D G3DSA:2.30.130.90 310 473 5.8E-67 T 11-10-2018 VSVS12_01659 efadbb0cf7a954670db3810bc3aa1dc2 473 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 7 103 1.5E-28 T 11-10-2018 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 VSVS12_01659 efadbb0cf7a954670db3810bc3aa1dc2 473 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 89 103 1.9E-27 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VSVS12_01659 efadbb0cf7a954670db3810bc3aa1dc2 473 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 237 253 1.9E-27 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VSVS12_01659 efadbb0cf7a954670db3810bc3aa1dc2 473 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 187 199 1.9E-27 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VSVS12_01659 efadbb0cf7a954670db3810bc3aa1dc2 473 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 291 308 1.9E-27 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VSVS12_01659 efadbb0cf7a954670db3810bc3aa1dc2 473 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 120 130 1.9E-27 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VSVS12_01659 efadbb0cf7a954670db3810bc3aa1dc2 473 Hamap MF_01579 Ribosomal RNA small subunit methyltransferase F [rsmF]. 5 473 63.802 T 11-10-2018 IPR023545 rRNA small subunit methyltransferase F GO:0008649 VSVS12_01659 efadbb0cf7a954670db3810bc3aa1dc2 473 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 40 308 1.6E-100 T 11-10-2018 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 VSVS12_01659 efadbb0cf7a954670db3810bc3aa1dc2 473 Pfam PF01189 16S rRNA methyltransferase RsmB/F 118 306 5.0E-47 T 11-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 VSVS12_01659 efadbb0cf7a954670db3810bc3aa1dc2 473 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 186 197 - T 11-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 VSVS12_01659 efadbb0cf7a954670db3810bc3aa1dc2 473 SUPERFAMILY SSF53335 7 308 3.84E-61 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_01659 efadbb0cf7a954670db3810bc3aa1dc2 473 Gene3D G3DSA:3.40.50.150 2 308 6.6E-96 T 11-10-2018 VSVS12_01659 efadbb0cf7a954670db3810bc3aa1dc2 473 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 419 468 1.0E-11 T 11-10-2018 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain VSVS12_00061 ea7a177ed70c8748f695d40dd0bb4ab0 89 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 7 78 4.0E-15 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VSVS12_00061 ea7a177ed70c8748f695d40dd0bb4ab0 89 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VSVS12_00061 ea7a177ed70c8748f695d40dd0bb4ab0 89 SUPERFAMILY SSF54292 3 87 5.24E-26 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VSVS12_00061 ea7a177ed70c8748f695d40dd0bb4ab0 89 Gene3D G3DSA:3.10.20.30 2 89 5.2E-22 T 11-10-2018 IPR012675 Beta-grasp domain superfamily VSVS12_00695 c9cf024dd1290838ae20dade4514bdb9 337 SUPERFAMILY SSF53850 24 332 5.67E-78 T 11-10-2018 VSVS12_00695 c9cf024dd1290838ae20dade4514bdb9 337 Pfam PF13343 Bacterial extracellular solute-binding protein 72 300 9.3E-20 T 11-10-2018 VSVS12_00695 c9cf024dd1290838ae20dade4514bdb9 337 Gene3D G3DSA:3.40.190.10 25 297 7.6E-128 T 11-10-2018 VSVS12_00695 c9cf024dd1290838ae20dade4514bdb9 337 PIRSF PIRSF002825 1 337 3.0E-103 T 11-10-2018 IPR026045 Ferric binding protein VSVS12_00695 c9cf024dd1290838ae20dade4514bdb9 337 Gene3D G3DSA:3.40.190.10 120 328 7.6E-128 T 11-10-2018 VSVS12_03077 5a7a72fb0d12f2b84bb69ce6ae1f15cf 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 545 558 1.1E-12 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VSVS12_03077 5a7a72fb0d12f2b84bb69ce6ae1f15cf 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 98 116 1.1E-12 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VSVS12_03077 5a7a72fb0d12f2b84bb69ce6ae1f15cf 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 336 355 1.1E-12 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VSVS12_03077 5a7a72fb0d12f2b84bb69ce6ae1f15cf 636 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 242 255 1.1E-12 T 11-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 VSVS12_03077 5a7a72fb0d12f2b84bb69ce6ae1f15cf 636 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 78 346 8.3E-51 T 11-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 VSVS12_03077 5a7a72fb0d12f2b84bb69ce6ae1f15cf 636 PIRSF PIRSF001336 1 636 2.3E-251 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VSVS12_03077 5a7a72fb0d12f2b84bb69ce6ae1f15cf 636 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 3 635 42.475 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VSVS12_03077 5a7a72fb0d12f2b84bb69ce6ae1f15cf 636 SUPERFAMILY SSF51419 66 348 3.18E-64 T 11-10-2018 IPR029066 PLP-binding barrel VSVS12_03077 5a7a72fb0d12f2b84bb69ce6ae1f15cf 636 Gene3D G3DSA:2.40.37.10 14 572 7.5E-236 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VSVS12_03077 5a7a72fb0d12f2b84bb69ce6ae1f15cf 636 Gene3D G3DSA:3.20.20.10 67 351 7.5E-236 T 11-10-2018 IPR029066 PLP-binding barrel VSVS12_03077 5a7a72fb0d12f2b84bb69ce6ae1f15cf 636 Gene3D G3DSA:1.20.58.930 368 463 7.5E-236 T 11-10-2018 VSVS12_03077 5a7a72fb0d12f2b84bb69ce6ae1f15cf 636 PRINTS PR01180 Arginine decarboxylase signature 467 488 5.9E-64 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VSVS12_03077 5a7a72fb0d12f2b84bb69ce6ae1f15cf 636 PRINTS PR01180 Arginine decarboxylase signature 492 517 5.9E-64 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VSVS12_03077 5a7a72fb0d12f2b84bb69ce6ae1f15cf 636 PRINTS PR01180 Arginine decarboxylase signature 66 81 5.9E-64 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VSVS12_03077 5a7a72fb0d12f2b84bb69ce6ae1f15cf 636 PRINTS PR01180 Arginine decarboxylase signature 199 221 5.9E-64 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VSVS12_03077 5a7a72fb0d12f2b84bb69ce6ae1f15cf 636 PRINTS PR01180 Arginine decarboxylase signature 149 164 5.9E-64 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VSVS12_03077 5a7a72fb0d12f2b84bb69ce6ae1f15cf 636 PRINTS PR01180 Arginine decarboxylase signature 326 343 5.9E-64 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VSVS12_03077 5a7a72fb0d12f2b84bb69ce6ae1f15cf 636 PRINTS PR01180 Arginine decarboxylase signature 545 566 5.9E-64 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VSVS12_03077 5a7a72fb0d12f2b84bb69ce6ae1f15cf 636 PRINTS PR01180 Arginine decarboxylase signature 175 196 5.9E-64 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VSVS12_03077 5a7a72fb0d12f2b84bb69ce6ae1f15cf 636 PRINTS PR01180 Arginine decarboxylase signature 90 104 5.9E-64 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VSVS12_03077 5a7a72fb0d12f2b84bb69ce6ae1f15cf 636 TIGRFAM TIGR01273 speA: arginine decarboxylase 7 634 2.0E-268 T 11-10-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 VSVS12_02622 d7ee941408203ae9bcbb57eb853331be 322 SUPERFAMILY SSF54211 7 195 9.11E-34 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VSVS12_02622 d7ee941408203ae9bcbb57eb853331be 322 Hamap MF_00384 Homoserine kinase [thrB]. 9 318 29.078 T 11-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 VSVS12_02622 d7ee941408203ae9bcbb57eb853331be 322 Pfam PF08544 GHMP kinases C terminal 222 296 5.0E-10 T 11-10-2018 IPR013750 GHMP kinase, C-terminal domain VSVS12_02622 d7ee941408203ae9bcbb57eb853331be 322 Pfam PF00288 GHMP kinases N terminal domain 95 160 1.5E-13 T 11-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 VSVS12_02622 d7ee941408203ae9bcbb57eb853331be 322 PIRSF PIRSF000676 3 320 7.4E-80 T 11-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 VSVS12_02622 d7ee941408203ae9bcbb57eb853331be 322 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 100 111 - T 11-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 VSVS12_02622 d7ee941408203ae9bcbb57eb853331be 322 SUPERFAMILY SSF55060 182 298 7.19E-33 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily VSVS12_02622 d7ee941408203ae9bcbb57eb853331be 322 PRINTS PR00958 Homoserine kinase signature 185 202 9.5E-31 T 11-10-2018 VSVS12_02622 d7ee941408203ae9bcbb57eb853331be 322 PRINTS PR00958 Homoserine kinase signature 264 279 9.5E-31 T 11-10-2018 VSVS12_02622 d7ee941408203ae9bcbb57eb853331be 322 PRINTS PR00958 Homoserine kinase signature 14 29 9.5E-31 T 11-10-2018 VSVS12_02622 d7ee941408203ae9bcbb57eb853331be 322 PRINTS PR00958 Homoserine kinase signature 107 122 9.5E-31 T 11-10-2018 VSVS12_02622 d7ee941408203ae9bcbb57eb853331be 322 PRINTS PR00958 Homoserine kinase signature 147 160 9.5E-31 T 11-10-2018 VSVS12_02622 d7ee941408203ae9bcbb57eb853331be 322 TIGRFAM TIGR00191 thrB: homoserine kinase 7 317 7.5E-107 T 11-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 VSVS12_02622 d7ee941408203ae9bcbb57eb853331be 322 Gene3D G3DSA:3.30.230.10 9 177 8.1E-89 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VSVS12_02622 d7ee941408203ae9bcbb57eb853331be 322 Gene3D G3DSA:3.30.70.890 178 287 8.1E-89 T 11-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily VSVS12_01619 79d140eccb0df15bd638cb2248ea3bc1 307 Gene3D G3DSA:3.40.800.10 1 305 3.4E-65 T 11-10-2018 VSVS12_01619 79d140eccb0df15bd638cb2248ea3bc1 307 PIRSF PIRSF036979 3 302 2.0E-28 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 VSVS12_01619 79d140eccb0df15bd638cb2248ea3bc1 307 SUPERFAMILY SSF52768 41 304 2.88E-55 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily VSVS12_01619 79d140eccb0df15bd638cb2248ea3bc1 307 Pfam PF00491 Arginase family 7 300 3.8E-52 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 VSVS12_01619 79d140eccb0df15bd638cb2248ea3bc1 307 PRINTS PR00116 Arginase signature 230 259 5.7E-21 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 VSVS12_01619 79d140eccb0df15bd638cb2248ea3bc1 307 PRINTS PR00116 Arginase signature 103 118 5.7E-21 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 VSVS12_01619 79d140eccb0df15bd638cb2248ea3bc1 307 PRINTS PR00116 Arginase signature 181 199 5.7E-21 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 VSVS12_01619 79d140eccb0df15bd638cb2248ea3bc1 307 PRINTS PR00116 Arginase signature 131 158 5.7E-21 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 VSVS12_01341 6d124cd9b0039e72b7f6413aea807291 1018 Gene3D G3DSA:1.10.10.10 942 1009 3.5E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_01341 6d124cd9b0039e72b7f6413aea807291 1018 SUPERFAMILY SSF52540 605 917 9.74E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01341 6d124cd9b0039e72b7f6413aea807291 1018 Gene3D G3DSA:3.40.50.300 628 930 2.8E-118 T 11-10-2018 VSVS12_01341 6d124cd9b0039e72b7f6413aea807291 1018 Pfam PF01580 FtsK/SpoIIIE family 634 844 2.4E-67 T 11-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 VSVS12_01341 6d124cd9b0039e72b7f6413aea807291 1018 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 29 199 2.2E-42 T 11-10-2018 IPR025199 DNA translocase FtsK, 4TM region VSVS12_01341 6d124cd9b0039e72b7f6413aea807291 1018 SUPERFAMILY SSF46785 948 1013 4.44E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_01341 6d124cd9b0039e72b7f6413aea807291 1018 Pfam PF09397 Ftsk gamma domain 950 1010 6.3E-26 T 11-10-2018 IPR018541 FtsK gamma domain VSVS12_01341 6d124cd9b0039e72b7f6413aea807291 1018 Gene3D G3DSA:3.30.980.40 523 627 8.8E-33 T 11-10-2018 VSVS12_01341 6d124cd9b0039e72b7f6413aea807291 1018 SMART SM00843 948 1013 1.8E-38 T 11-10-2018 IPR018541 FtsK gamma domain VSVS12_02142 a9e94256d059af10f6e81696784d50fe 361 SUPERFAMILY SSF74653 270 360 1.2E-14 T 11-10-2018 VSVS12_02142 a9e94256d059af10f6e81696784d50fe 361 Pfam PF06519 TolA C-terminal 261 359 6.0E-31 T 11-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 VSVS12_02142 a9e94256d059af10f6e81696784d50fe 361 Gene3D G3DSA:3.30.1150.10 261 360 2.6E-23 T 11-10-2018 VSVS12_02142 a9e94256d059af10f6e81696784d50fe 361 TIGRFAM TIGR02794 tolA_full: protein TolA 13 360 5.0E-80 T 11-10-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0016021|GO:0043213 VSVS12_02793 843a5778bfad991692470ea92e09fcd8 618 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 577 603 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VSVS12_02793 843a5778bfad991692470ea92e09fcd8 618 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 408 421 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VSVS12_02793 843a5778bfad991692470ea92e09fcd8 618 PRINTS PR00046 Major sigma-70 factor signature 432 440 3.1E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VSVS12_02793 843a5778bfad991692470ea92e09fcd8 618 PRINTS PR00046 Major sigma-70 factor signature 556 568 3.1E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VSVS12_02793 843a5778bfad991692470ea92e09fcd8 618 PRINTS PR00046 Major sigma-70 factor signature 592 603 3.1E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VSVS12_02793 843a5778bfad991692470ea92e09fcd8 618 PRINTS PR00046 Major sigma-70 factor signature 577 592 3.1E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VSVS12_02793 843a5778bfad991692470ea92e09fcd8 618 PRINTS PR00046 Major sigma-70 factor signature 408 421 3.1E-31 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VSVS12_02793 843a5778bfad991692470ea92e09fcd8 618 Pfam PF03979 Sigma-70 factor, region 1.1 4 80 1.1E-28 T 11-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 VSVS12_02793 843a5778bfad991692470ea92e09fcd8 618 Pfam PF04542 Sigma-70 region 2 384 453 1.7E-21 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VSVS12_02793 843a5778bfad991692470ea92e09fcd8 618 Gene3D G3DSA:1.10.10.10 457 533 2.6E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_02793 843a5778bfad991692470ea92e09fcd8 618 Gene3D G3DSA:1.10.601.10 113 453 6.4E-139 T 11-10-2018 VSVS12_02793 843a5778bfad991692470ea92e09fcd8 618 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 380 605 8.8E-38 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VSVS12_02793 843a5778bfad991692470ea92e09fcd8 618 Pfam PF04539 Sigma-70 region 3 463 538 1.3E-28 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 VSVS12_02793 843a5778bfad991692470ea92e09fcd8 618 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 1.8E-12 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VSVS12_02793 843a5778bfad991692470ea92e09fcd8 618 SUPERFAMILY SSF88946 115 451 2.49E-98 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VSVS12_02793 843a5778bfad991692470ea92e09fcd8 618 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 617 46.063 T 11-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 VSVS12_02793 843a5778bfad991692470ea92e09fcd8 618 SUPERFAMILY SSF88659 514 616 9.94E-26 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VSVS12_02793 843a5778bfad991692470ea92e09fcd8 618 Gene3D G3DSA:1.10.220.120 1 64 6.5E-30 T 11-10-2018 VSVS12_02793 843a5778bfad991692470ea92e09fcd8 618 SUPERFAMILY SSF88659 457 530 2.22E-20 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VSVS12_02793 843a5778bfad991692470ea92e09fcd8 618 Gene3D G3DSA:1.10.10.10 534 618 3.0E-37 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_02793 843a5778bfad991692470ea92e09fcd8 618 Pfam PF04546 Sigma-70, non-essential region 139 353 5.3E-64 T 11-10-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VSVS12_02793 843a5778bfad991692470ea92e09fcd8 618 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 380 616 1.6E-120 T 11-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 VSVS12_02793 843a5778bfad991692470ea92e09fcd8 618 Pfam PF04545 Sigma-70, region 4 552 605 1.8E-19 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 VSVS12_03341 8ae728638c8e4ba104511d259fcc32d7 214 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 3 186 4.0E-23 T 11-10-2018 VSVS12_03341 8ae728638c8e4ba104511d259fcc32d7 214 Gene3D G3DSA:3.40.50.1000 3 188 1.2E-30 T 11-10-2018 IPR023214 HAD superfamily VSVS12_03341 8ae728638c8e4ba104511d259fcc32d7 214 SUPERFAMILY SSF56784 2 187 2.03E-22 T 11-10-2018 IPR036412 HAD-like superfamily VSVS12_03341 8ae728638c8e4ba104511d259fcc32d7 214 TIGRFAM TIGR01490 HAD-SF-IB-hyp1: HAD hydrolase, family IB 3 191 4.3E-33 T 11-10-2018 IPR006385 HAD-superfamily hydrolase, subfamily IB, SerB1-like VSVS12_03341 8ae728638c8e4ba104511d259fcc32d7 214 Gene3D G3DSA:1.20.1440.100 15 87 1.2E-30 T 11-10-2018 VSVS12_03341 8ae728638c8e4ba104511d259fcc32d7 214 Pfam PF12710 haloacid dehalogenase-like hydrolase 4 183 3.9E-28 T 11-10-2018 VSVS12_04465 d219c33804f59cdb7e75bbf0ff4ddba5 760 SUPERFAMILY SSF52540 49 409 6.63E-29 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_04465 d219c33804f59cdb7e75bbf0ff4ddba5 760 Pfam PF00271 Helicase conserved C-terminal domain 580 692 2.1E-4 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_04465 d219c33804f59cdb7e75bbf0ff4ddba5 760 Gene3D G3DSA:3.40.50.10810 293 461 8.2E-8 T 11-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily VSVS12_04465 d219c33804f59cdb7e75bbf0ff4ddba5 760 Gene3D G3DSA:3.40.50.10810 65 171 5.3E-10 T 11-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily VSVS12_04465 d219c33804f59cdb7e75bbf0ff4ddba5 760 Pfam PF04851 Type III restriction enzyme, res subunit 62 138 1.5E-6 T 11-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 VSVS12_04465 d219c33804f59cdb7e75bbf0ff4ddba5 760 SUPERFAMILY SSF52540 350 732 7.15E-26 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_04465 d219c33804f59cdb7e75bbf0ff4ddba5 760 Gene3D G3DSA:3.40.50.300 492 759 3.2E-20 T 11-10-2018 VSVS12_04465 d219c33804f59cdb7e75bbf0ff4ddba5 760 SMART SM00487 58 431 1.3E-9 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VSVS12_01631 d35a32841e2049d59b176c6ab2c00eb3 1046 SMART SM00062 292 511 0.0062 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VSVS12_01631 d35a32841e2049d59b176c6ab2c00eb3 1046 SMART SM00471 673 984 4.0E-5 T 11-10-2018 IPR003607 HD/PDEase domain VSVS12_01631 d35a32841e2049d59b176c6ab2c00eb3 1046 Gene3D G3DSA:3.40.190.10 376 470 3.0E-32 T 11-10-2018 VSVS12_01631 d35a32841e2049d59b176c6ab2c00eb3 1046 SUPERFAMILY SSF109604 902 1000 1.0E-7 T 11-10-2018 VSVS12_01631 d35a32841e2049d59b176c6ab2c00eb3 1046 Gene3D G3DSA:3.40.190.10 290 507 3.0E-32 T 11-10-2018 VSVS12_01631 d35a32841e2049d59b176c6ab2c00eb3 1046 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 293 496 2.2E-15 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VSVS12_01631 d35a32841e2049d59b176c6ab2c00eb3 1046 SUPERFAMILY SSF53850 293 508 8.04E-22 T 11-10-2018 VSVS12_01631 d35a32841e2049d59b176c6ab2c00eb3 1046 SUPERFAMILY SSF109604 668 752 4.4E-8 T 11-10-2018 VSVS12_01631 d35a32841e2049d59b176c6ab2c00eb3 1046 Pfam PF13487 HD domain 901 966 1.4E-20 T 11-10-2018 VSVS12_01631 d35a32841e2049d59b176c6ab2c00eb3 1046 Gene3D G3DSA:1.10.3210.10 652 763 1.2E-17 T 11-10-2018 VSVS12_01631 d35a32841e2049d59b176c6ab2c00eb3 1046 Gene3D G3DSA:1.10.3210.10 893 1026 1.9E-24 T 11-10-2018 VSVS12_00598 2af8f7ac8b3bdeafd934e3ba94bbdfad 191 Gene3D G3DSA:3.30.700.10 8 190 2.0E-10 T 11-10-2018 VSVS12_00598 2af8f7ac8b3bdeafd934e3ba94bbdfad 191 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 28 1.4E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_00598 2af8f7ac8b3bdeafd934e3ba94bbdfad 191 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 28 5.4E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_00598 2af8f7ac8b3bdeafd934e3ba94bbdfad 191 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_00598 2af8f7ac8b3bdeafd934e3ba94bbdfad 191 SUPERFAMILY SSF54523 8 86 2.2E-12 T 11-10-2018 VSVS12_02536 6673fdb1637ae75d1954dc2ee530316c 258 PIRSF PIRSF001357 5 252 1.3E-75 T 11-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 VSVS12_02536 6673fdb1637ae75d1954dc2ee530316c 258 Pfam PF01791 DeoC/LacD family aldolase 11 240 3.0E-46 T 11-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 VSVS12_02536 6673fdb1637ae75d1954dc2ee530316c 258 Gene3D G3DSA:3.20.20.70 1 248 1.1E-99 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_02536 6673fdb1637ae75d1954dc2ee530316c 258 SMART SM01133 10 244 5.2E-78 T 11-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 VSVS12_02536 6673fdb1637ae75d1954dc2ee530316c 258 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 11 230 4.7E-79 T 11-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 VSVS12_02536 6673fdb1637ae75d1954dc2ee530316c 258 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 1 258 51.829 T 11-10-2018 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 VSVS12_02536 6673fdb1637ae75d1954dc2ee530316c 258 SUPERFAMILY SSF51569 6 245 2.3E-82 T 11-10-2018 VSVS12_02125 8dabcbe22c1bf55a8544b845e4e65884 560 Gene3D G3DSA:1.20.1560.10 4 341 2.5E-6 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VSVS12_02125 8dabcbe22c1bf55a8544b845e4e65884 560 ProSitePatterns PS00211 ABC transporters family signature. 480 494 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_02125 8dabcbe22c1bf55a8544b845e4e65884 560 SMART SM00382 385 554 1.7E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_02125 8dabcbe22c1bf55a8544b845e4e65884 560 SUPERFAMILY SSF90123 19 336 1.31E-25 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VSVS12_02125 8dabcbe22c1bf55a8544b845e4e65884 560 SUPERFAMILY SSF52540 371 558 5.52E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02125 8dabcbe22c1bf55a8544b845e4e65884 560 Gene3D G3DSA:3.40.50.300 359 559 1.6E-36 T 11-10-2018 VSVS12_02125 8dabcbe22c1bf55a8544b845e4e65884 560 Pfam PF00005 ABC transporter 380 508 2.2E-18 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_02125 8dabcbe22c1bf55a8544b845e4e65884 560 Pfam PF06472 ABC transporter transmembrane region 2 2 291 6.9E-58 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VSVS12_03602 a9d904e55a8eac62eb3fd9799bb64880 106 SUPERFAMILY SSF46626 35 105 5.44E-19 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VSVS12_03602 a9d904e55a8eac62eb3fd9799bb64880 106 Gene3D G3DSA:1.10.760.10 24 106 6.6E-22 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VSVS12_03602 a9d904e55a8eac62eb3fd9799bb64880 106 Pfam PF00034 Cytochrome c 36 101 2.6E-6 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_02724 24fb32f439d4244521f8641df05ff4ca 541 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 122 389 1.8E-24 T 11-10-2018 IPR008766 Replication gene A protein GO:0006260 VSVS12_00934 004f836430dc597bc08c290583f5d038 354 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 218 344 4.5E-45 T 11-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 VSVS12_00934 004f836430dc597bc08c290583f5d038 354 SUPERFAMILY SSF64383 217 350 1.44E-47 T 11-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 VSVS12_00934 004f836430dc597bc08c290583f5d038 354 Hamap MF_00509 Cell division protein ZipA [zipA]. 2 347 22.293 T 11-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 VSVS12_00934 004f836430dc597bc08c290583f5d038 354 SMART SM00771 215 345 4.2E-70 T 11-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 VSVS12_00934 004f836430dc597bc08c290583f5d038 354 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 3 345 1.7E-82 T 11-10-2018 IPR011919 Cell division protein ZipA GO:0016021|GO:0090529 VSVS12_00934 004f836430dc597bc08c290583f5d038 354 Gene3D G3DSA:3.30.1400.10 214 353 8.7E-48 T 11-10-2018 IPR036765 ZipA, C-terminal FtsZ-binding domain superfamily GO:0090529 VSVS12_00934 004f836430dc597bc08c290583f5d038 354 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 218 349 2.0E-65 T 11-10-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 VSVS12_00461 fdae45c44be152a4ceb585304cdf7b1c 598 Hamap MF_01412 Glutathione-regulated potassium-efflux system protein KefB [kefB]. 3 598 47.96 T 11-10-2018 IPR020884 Glutathione-regulated potassium-efflux system protein KefB GO:0005886|GO:0006813|GO:0015503 VSVS12_00461 fdae45c44be152a4ceb585304cdf7b1c 598 Gene3D G3DSA:1.20.1530.20 4 384 1.3E-86 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily VSVS12_00461 fdae45c44be152a4ceb585304cdf7b1c 598 Gene3D G3DSA:3.40.50.720 397 560 3.1E-35 T 11-10-2018 VSVS12_00461 fdae45c44be152a4ceb585304cdf7b1c 598 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 15 282 1.0E-82 T 11-10-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 VSVS12_00461 fdae45c44be152a4ceb585304cdf7b1c 598 SUPERFAMILY SSF51735 401 528 2.47E-30 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_00461 fdae45c44be152a4ceb585304cdf7b1c 598 Pfam PF02254 TrkA-N domain 402 513 8.4E-23 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VSVS12_00461 fdae45c44be152a4ceb585304cdf7b1c 598 Pfam PF00999 Sodium/hydrogen exchanger family 13 371 8.9E-67 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VSVS12_00510 76df9006cde8b1c28a3ccce0408334f3 153 SUPERFAMILY SSF103039 1 153 8.11E-39 T 11-10-2018 IPR028976 CheC-like superfamily VSVS12_00510 76df9006cde8b1c28a3ccce0408334f3 153 Pfam PF13690 Chemotaxis phosphatase CheX 42 140 4.9E-22 T 11-10-2018 IPR028051 Chemotaxis phosphatase CheX-like domain VSVS12_00510 76df9006cde8b1c28a3ccce0408334f3 153 Gene3D G3DSA:3.40.1550.10 1 153 1.6E-46 T 11-10-2018 IPR028976 CheC-like superfamily VSVS12_01715 15f3141d6d6a062997d7344424fa98d3 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 1.9E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_01715 15f3141d6d6a062997d7344424fa98d3 295 SUPERFAMILY SSF53850 87 291 3.26E-34 T 11-10-2018 VSVS12_01715 15f3141d6d6a062997d7344424fa98d3 295 Gene3D G3DSA:1.10.10.10 2 87 1.5E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_01715 15f3141d6d6a062997d7344424fa98d3 295 SUPERFAMILY SSF46785 4 85 2.72E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_01715 15f3141d6d6a062997d7344424fa98d3 295 Gene3D G3DSA:3.40.190.290 91 287 2.2E-47 T 11-10-2018 VSVS12_01715 15f3141d6d6a062997d7344424fa98d3 295 Pfam PF03466 LysR substrate binding domain 90 286 2.6E-31 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_03508 646fbaede4d9a7027e5ae0e783f81440 440 SUPERFAMILY SSF103473 23 427 1.57E-34 T 11-10-2018 IPR036259 MFS transporter superfamily VSVS12_03508 646fbaede4d9a7027e5ae0e783f81440 440 Gene3D G3DSA:1.20.1250.20 238 431 1.2E-37 T 11-10-2018 VSVS12_03508 646fbaede4d9a7027e5ae0e783f81440 440 Pfam PF07690 Major Facilitator Superfamily 35 382 1.3E-15 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VSVS12_03508 646fbaede4d9a7027e5ae0e783f81440 440 Gene3D G3DSA:1.20.1250.20 18 234 1.6E-44 T 11-10-2018 VSVS12_03508 646fbaede4d9a7027e5ae0e783f81440 440 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 20 422 1.8E-91 T 11-10-2018 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 VSVS12_03157 a66fea15c0c2d29925408c7793f54cff 527 Pfam PF00367 phosphotransferase system, EIIB 451 481 2.9E-14 T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VSVS12_03157 a66fea15c0c2d29925408c7793f54cff 527 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 413 509 1.5E-16 T 11-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VSVS12_03157 a66fea15c0c2d29925408c7793f54cff 527 SUPERFAMILY SSF55604 451 524 4.05E-17 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VSVS12_03157 a66fea15c0c2d29925408c7793f54cff 527 Gene3D G3DSA:3.30.1360.60 445 524 1.2E-22 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VSVS12_03157 a66fea15c0c2d29925408c7793f54cff 527 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 461 478 - T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VSVS12_03157 a66fea15c0c2d29925408c7793f54cff 527 Pfam PF02378 Phosphotransferase system, EIIC 10 356 8.1E-56 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VSVS12_02365 c5bd6a56f74a7b25a5034aac320aa81d 951 Gene3D G3DSA:1.10.287.1150 85 167 4.1E-30 T 11-10-2018 VSVS12_02365 c5bd6a56f74a7b25a5034aac320aa81d 951 Pfam PF00676 Dehydrogenase E1 component 221 515 1.1E-50 T 11-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 VSVS12_02365 c5bd6a56f74a7b25a5034aac320aa81d 951 Gene3D G3DSA:3.40.50.12470 557 803 2.0E-171 T 11-10-2018 VSVS12_02365 c5bd6a56f74a7b25a5034aac320aa81d 951 Gene3D G3DSA:3.40.50.970 168 534 5.5E-148 T 11-10-2018 VSVS12_02365 c5bd6a56f74a7b25a5034aac320aa81d 951 Pfam PF02779 Transketolase, pyrimidine binding domain 593 788 4.8E-66 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VSVS12_02365 c5bd6a56f74a7b25a5034aac320aa81d 951 Gene3D G3DSA:3.40.50.11610 724 930 2.0E-171 T 11-10-2018 VSVS12_02365 c5bd6a56f74a7b25a5034aac320aa81d 951 SUPERFAMILY SSF52518 121 537 1.77E-89 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold VSVS12_02365 c5bd6a56f74a7b25a5034aac320aa81d 951 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 50 2.3E-13 T 11-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VSVS12_02365 c5bd6a56f74a7b25a5034aac320aa81d 951 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 791 933 6.3E-54 T 11-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VSVS12_02365 c5bd6a56f74a7b25a5034aac320aa81d 951 SMART SM00861 594 787 5.0E-63 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VSVS12_02365 c5bd6a56f74a7b25a5034aac320aa81d 951 PIRSF PIRSF000157 1 935 0.0 T 11-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VSVS12_02365 c5bd6a56f74a7b25a5034aac320aa81d 951 SUPERFAMILY SSF52518 577 794 9.25E-53 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold VSVS12_02365 c5bd6a56f74a7b25a5034aac320aa81d 951 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 15 933 0.0 T 11-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 VSVS12_04339 a2c9d8170ada4713e81e3676695bdf83 290 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 168 287 3.3E-32 T 11-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 VSVS12_04339 a2c9d8170ada4713e81e3676695bdf83 290 SUPERFAMILY SSF51735 5 166 1.48E-51 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_04339 a2c9d8170ada4713e81e3676695bdf83 290 Gene3D G3DSA:3.40.50.720 1 165 6.4E-49 T 11-10-2018 VSVS12_04339 a2c9d8170ada4713e81e3676695bdf83 290 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 6 162 1.7E-47 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 VSVS12_04339 a2c9d8170ada4713e81e3676695bdf83 290 PIRSF PIRSF000103 1 290 2.1E-75 T 11-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 VSVS12_04339 a2c9d8170ada4713e81e3676695bdf83 290 Gene3D G3DSA:1.10.1040.10 166 290 2.0E-39 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VSVS12_04339 a2c9d8170ada4713e81e3676695bdf83 290 SUPERFAMILY SSF48179 166 290 4.31E-40 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VSVS12_02165 86b60eaf116ae7479824407ffb695390 756 Gene3D G3DSA:1.10.8.60 354 441 7.3E-35 T 11-10-2018 VSVS12_02165 86b60eaf116ae7479824407ffb695390 756 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 656 736 1.5E-24 T 11-10-2018 IPR019489 Clp ATPase, C-terminal VSVS12_02165 86b60eaf116ae7479824407ffb695390 756 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 61 1.7E-13 T 11-10-2018 IPR004176 Clp, N-terminal VSVS12_02165 86b60eaf116ae7479824407ffb695390 756 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 737 0.0 T 11-10-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0016887|GO:0043335 VSVS12_02165 86b60eaf116ae7479824407ffb695390 756 SMART SM01086 656 745 1.7E-37 T 11-10-2018 IPR019489 Clp ATPase, C-terminal VSVS12_02165 86b60eaf116ae7479824407ffb695390 756 Gene3D G3DSA:3.40.50.300 162 353 4.7E-62 T 11-10-2018 VSVS12_02165 86b60eaf116ae7479824407ffb695390 756 Gene3D G3DSA:1.10.1780.10 1 143 1.9E-43 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VSVS12_02165 86b60eaf116ae7479824407ffb695390 756 SMART SM00382 209 354 1.2E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_02165 86b60eaf116ae7479824407ffb695390 756 SMART SM00382 490 657 7.2E-7 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_02165 86b60eaf116ae7479824407ffb695390 756 Gene3D G3DSA:3.40.50.300 442 655 8.1E-76 T 11-10-2018 VSVS12_02165 86b60eaf116ae7479824407ffb695390 756 SUPERFAMILY SSF52540 171 431 5.22E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02165 86b60eaf116ae7479824407ffb695390 756 SUPERFAMILY SSF52540 440 743 5.95E-73 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02165 86b60eaf116ae7479824407ffb695390 756 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 521 539 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 VSVS12_02165 86b60eaf116ae7479824407ffb695390 756 SUPERFAMILY SSF81923 1 142 2.88E-59 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VSVS12_02165 86b60eaf116ae7479824407ffb695390 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 494 512 1.2E-35 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 VSVS12_02165 86b60eaf116ae7479824407ffb695390 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 536 554 1.2E-35 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 VSVS12_02165 86b60eaf116ae7479824407ffb695390 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 598 612 1.2E-35 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 VSVS12_02165 86b60eaf116ae7479824407ffb695390 756 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 565 583 1.2E-35 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 VSVS12_02165 86b60eaf116ae7479824407ffb695390 756 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 214 327 1.5E-11 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VSVS12_02165 86b60eaf116ae7479824407ffb695390 756 Pfam PF07724 AAA domain (Cdc48 subfamily) 489 650 4.3E-46 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VSVS12_02165 86b60eaf116ae7479824407ffb695390 756 Gene3D G3DSA:1.10.8.60 656 756 9.5E-32 T 11-10-2018 VSVS12_02165 86b60eaf116ae7479824407ffb695390 756 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 305 317 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 VSVS12_01191 60df9f6c79dfe5fc519c2c303814aa7a 783 SUPERFAMILY SSF52540 312 586 1.53E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01191 60df9f6c79dfe5fc519c2c303814aa7a 783 SMART SM00382 347 491 1.9E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_01191 60df9f6c79dfe5fc519c2c303814aa7a 783 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 351 488 1.1E-17 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VSVS12_01191 60df9f6c79dfe5fc519c2c303814aa7a 783 SUPERFAMILY SSF88697 10 200 4.47E-48 T 11-10-2018 IPR015947 PUA-like superfamily VSVS12_01191 60df9f6c79dfe5fc519c2c303814aa7a 783 Gene3D G3DSA:1.20.58.1480 119 244 5.5E-44 T 11-10-2018 VSVS12_01191 60df9f6c79dfe5fc519c2c303814aa7a 783 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 196 2.4E-40 T 11-10-2018 IPR003111 Lon, substrate-binding domain VSVS12_01191 60df9f6c79dfe5fc519c2c303814aa7a 783 Gene3D G3DSA:3.30.230.10 584 771 6.1E-85 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VSVS12_01191 60df9f6c79dfe5fc519c2c303814aa7a 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 355 374 9.9E-57 T 11-10-2018 VSVS12_01191 60df9f6c79dfe5fc519c2c303814aa7a 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 702 721 9.9E-57 T 11-10-2018 VSVS12_01191 60df9f6c79dfe5fc519c2c303814aa7a 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 672 691 9.9E-57 T 11-10-2018 VSVS12_01191 60df9f6c79dfe5fc519c2c303814aa7a 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 594 610 9.9E-57 T 11-10-2018 VSVS12_01191 60df9f6c79dfe5fc519c2c303814aa7a 783 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 725 743 9.9E-57 T 11-10-2018 VSVS12_01191 60df9f6c79dfe5fc519c2c303814aa7a 783 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 675 683 - T 11-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 VSVS12_01191 60df9f6c79dfe5fc519c2c303814aa7a 783 SUPERFAMILY SSF54211 594 769 1.02E-58 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VSVS12_01191 60df9f6c79dfe5fc519c2c303814aa7a 783 Gene3D G3DSA:3.40.50.300 312 489 2.0E-61 T 11-10-2018 VSVS12_01191 60df9f6c79dfe5fc519c2c303814aa7a 783 Hamap MF_01973 Lon protease [lon]. 11 771 71.672 T 11-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 VSVS12_01191 60df9f6c79dfe5fc519c2c303814aa7a 783 Gene3D G3DSA:1.10.8.60 490 583 1.4E-32 T 11-10-2018 VSVS12_01191 60df9f6c79dfe5fc519c2c303814aa7a 783 PIRSF PIRSF001174 1 774 0.0 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 VSVS12_01191 60df9f6c79dfe5fc519c2c303814aa7a 783 SMART SM00464 10 201 1.1E-76 T 11-10-2018 IPR003111 Lon, substrate-binding domain VSVS12_01191 60df9f6c79dfe5fc519c2c303814aa7a 783 Gene3D G3DSA:2.30.130.40 1 116 3.4E-36 T 11-10-2018 VSVS12_01191 60df9f6c79dfe5fc519c2c303814aa7a 783 TIGRFAM TIGR00763 lon: endopeptidase La 12 769 0.0 T 11-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 VSVS12_01191 60df9f6c79dfe5fc519c2c303814aa7a 783 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 569 771 1.1E-97 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 VSVS12_02414 662cac8055749fe8c41e115e01814cd4 104 Gene3D G3DSA:1.10.10.60 10 96 6.4E-10 T 11-10-2018 VSVS12_02414 662cac8055749fe8c41e115e01814cd4 104 Pfam PF01527 Transposase 7 82 2.0E-15 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 VSVS12_02414 662cac8055749fe8c41e115e01814cd4 104 SUPERFAMILY SSF46689 6 99 1.13E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_02345 662cac8055749fe8c41e115e01814cd4 104 Gene3D G3DSA:1.10.10.60 10 96 6.4E-10 T 11-10-2018 VSVS12_02345 662cac8055749fe8c41e115e01814cd4 104 Pfam PF01527 Transposase 7 82 2.0E-15 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 VSVS12_02345 662cac8055749fe8c41e115e01814cd4 104 SUPERFAMILY SSF46689 6 99 1.13E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_01706 8a1e06e664ff64e55d2e0b939c5ff420 951 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 19 43 0.0011 T 11-10-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal VSVS12_01706 8a1e06e664ff64e55d2e0b939c5ff420 951 SUPERFAMILY SSF53706 60 646 3.01E-198 T 11-10-2018 VSVS12_01706 8a1e06e664ff64e55d2e0b939c5ff420 951 Pfam PF01568 Molydopterin dinucleotide binding domain 818 944 5.1E-20 T 11-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 VSVS12_01706 8a1e06e664ff64e55d2e0b939c5ff420 951 SMART SM00926 61 115 4.5E-15 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VSVS12_01706 8a1e06e664ff64e55d2e0b939c5ff420 951 Gene3D G3DSA:2.20.25.90 61 114 2.7E-12 T 11-10-2018 VSVS12_01706 8a1e06e664ff64e55d2e0b939c5ff420 951 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 66 83 - T 11-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 VSVS12_01706 8a1e06e664ff64e55d2e0b939c5ff420 951 Pfam PF00384 Molybdopterin oxidoreductase 118 568 3.0E-57 T 11-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VSVS12_01706 8a1e06e664ff64e55d2e0b939c5ff420 951 Gene3D G3DSA:2.40.40.20 767 951 2.8E-47 T 11-10-2018 VSVS12_01706 8a1e06e664ff64e55d2e0b939c5ff420 951 Gene3D G3DSA:3.40.228.10 195 394 3.1E-132 T 11-10-2018 VSVS12_01706 8a1e06e664ff64e55d2e0b939c5ff420 951 PIRSF PIRSF036643 780 950 2.4E-15 T 11-10-2018 VSVS12_01706 8a1e06e664ff64e55d2e0b939c5ff420 951 PIRSF PIRSF036643 9 442 3.7E-103 T 11-10-2018 VSVS12_01706 8a1e06e664ff64e55d2e0b939c5ff420 951 PIRSF PIRSF036643 641 677 390.0 T 11-10-2018 VSVS12_01706 8a1e06e664ff64e55d2e0b939c5ff420 951 PIRSF PIRSF036643 457 592 4.7E-11 T 11-10-2018 VSVS12_01706 8a1e06e664ff64e55d2e0b939c5ff420 951 SUPERFAMILY SSF50692 752 951 3.39E-39 T 11-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily VSVS12_01706 8a1e06e664ff64e55d2e0b939c5ff420 951 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 65 112 7.5E-11 T 11-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VSVS12_01706 8a1e06e664ff64e55d2e0b939c5ff420 951 Gene3D G3DSA:3.40.50.740 126 617 3.1E-132 T 11-10-2018 VSVS12_01972 b53aad9f733673d7f76aef0c8d7630dd 295 Gene3D G3DSA:1.10.10.10 2 91 7.2E-11 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_01972 b53aad9f733673d7f76aef0c8d7630dd 295 SUPERFAMILY SSF53850 102 288 3.26E-12 T 11-10-2018 VSVS12_01972 b53aad9f733673d7f76aef0c8d7630dd 295 Gene3D G3DSA:3.40.190.290 94 290 6.8E-13 T 11-10-2018 VSVS12_01972 b53aad9f733673d7f76aef0c8d7630dd 295 Pfam PF03466 LysR substrate binding domain 116 288 1.2E-8 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_01972 b53aad9f733673d7f76aef0c8d7630dd 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 3.2E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_01972 b53aad9f733673d7f76aef0c8d7630dd 295 SUPERFAMILY SSF46785 3 80 8.16E-11 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_03393 16961b374216452e5a47dc1c1cf0fd75 420 SMART SM00900 86 169 1.5E-13 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 VSVS12_03393 16961b374216452e5a47dc1c1cf0fd75 420 Pfam PF12801 4Fe-4S binding domain 254 295 5.2E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VSVS12_03393 16961b374216452e5a47dc1c1cf0fd75 420 Pfam PF12801 4Fe-4S binding domain 352 374 2.4 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VSVS12_03393 16961b374216452e5a47dc1c1cf0fd75 420 Pfam PF04205 FMN-binding domain 86 166 1.1E-11 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 VSVS12_01559 e019b6e4a3a671b8083c8c4041bc12bf 163 SUPERFAMILY SSF49503 60 154 1.73E-13 T 11-10-2018 IPR008972 Cupredoxin VSVS12_01559 e019b6e4a3a671b8083c8c4041bc12bf 163 Gene3D G3DSA:2.60.40.420 43 162 1.0E-9 T 11-10-2018 IPR008972 Cupredoxin VSVS12_01808 2acb19ba6118aedfc58f22d72d6e7d6e 863 Pfam PF11874 Domain of unknown function (DUF3394) 677 854 8.9E-67 T 11-10-2018 IPR021814 Protein of unknown function DUF3394 VSVS12_01808 2acb19ba6118aedfc58f22d72d6e7d6e 863 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 141 671 1.2E-78 T 11-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VSVS12_01808 2acb19ba6118aedfc58f22d72d6e7d6e 863 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 35 728 4.0E-214 T 11-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ VSVS12_01984 d39d84c970089e2ae971154f6663e8f4 665 SUPERFAMILY SSF58104 355 664 1.83E-62 T 11-10-2018 VSVS12_01984 d39d84c970089e2ae971154f6663e8f4 665 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 470 629 8.9E-39 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_01984 d39d84c970089e2ae971154f6663e8f4 665 Gene3D G3DSA:1.10.287.950 336 665 1.1E-59 T 11-10-2018 VSVS12_01984 d39d84c970089e2ae971154f6663e8f4 665 Pfam PF08376 Nitrate and nitrite sensing 58 296 1.2E-32 T 11-10-2018 IPR013587 Nitrate/nitrite sensing protein VSVS12_01984 d39d84c970089e2ae971154f6663e8f4 665 SMART SM00283 402 663 7.6E-48 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_01577 8cc3556a01a40c560a4890ffeae0a055 229 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 9 111 3.5E-17 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VSVS12_01577 8cc3556a01a40c560a4890ffeae0a055 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 216 5.0E-24 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VSVS12_01577 8cc3556a01a40c560a4890ffeae0a055 229 Gene3D G3DSA:1.10.3720.10 3 218 5.6E-49 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_01577 8cc3556a01a40c560a4890ffeae0a055 229 SUPERFAMILY SSF161098 10 202 1.83E-40 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_00073 a214a5a421c45d0841d73dae50acf77c 217 Pfam PF01810 LysE type translocator 17 207 1.9E-37 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VSVS12_00073 a214a5a421c45d0841d73dae50acf77c 217 PIRSF PIRSF006324 1 211 7.4E-51 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VSVS12_02621 fa88af7e54caaad382b3ad0e626e5124 427 SUPERFAMILY SSF53686 1 424 4.32E-131 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VSVS12_02621 fa88af7e54caaad382b3ad0e626e5124 427 Gene3D G3DSA:3.90.1380.10 1 79 1.1E-31 T 11-10-2018 IPR037158 Threonine synthase, N-terminal domain superfamily VSVS12_02621 fa88af7e54caaad382b3ad0e626e5124 427 Gene3D G3DSA:3.40.50.1100 83 392 8.8E-137 T 11-10-2018 VSVS12_02621 fa88af7e54caaad382b3ad0e626e5124 427 TIGRFAM TIGR00260 thrC: threonine synthase 50 387 5.4E-114 T 11-10-2018 IPR004450 Threonine synthase-like VSVS12_02621 fa88af7e54caaad382b3ad0e626e5124 427 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 95 109 - T 11-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 VSVS12_02621 fa88af7e54caaad382b3ad0e626e5124 427 Gene3D G3DSA:3.40.50.1100 101 399 8.8E-137 T 11-10-2018 VSVS12_02621 fa88af7e54caaad382b3ad0e626e5124 427 Pfam PF14821 Threonine synthase N terminus 8 78 1.3E-8 T 11-10-2018 IPR029144 Threonine synthase, N-terminal VSVS12_02621 fa88af7e54caaad382b3ad0e626e5124 427 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 85 366 8.4E-24 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VSVS12_03342 fab5efeb8f679c5d119cc2080233b3a4 114 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 36 102 3.2E-8 T 11-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core VSVS12_03342 fab5efeb8f679c5d119cc2080233b3a4 114 SUPERFAMILY SSF101386 5 104 1.8E-20 T 11-10-2018 VSVS12_03342 fab5efeb8f679c5d119cc2080233b3a4 114 PIRSF PIRSF036521 9 106 1.9E-8 T 11-10-2018 IPR011411 NTP Pyrophosphohydrolase MazG-related VSVS12_03342 fab5efeb8f679c5d119cc2080233b3a4 114 Gene3D G3DSA:1.10.287.1080 9 106 1.5E-22 T 11-10-2018 VSVS12_02588 adc2ddc86acdb7746f077e9a0a3f5565 761 SMART SM00434 13 463 1.3E-235 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VSVS12_02588 adc2ddc86acdb7746f077e9a0a3f5565 761 Gene3D G3DSA:3.30.1360.40 240 333 1.0E-180 T 11-10-2018 VSVS12_02588 adc2ddc86acdb7746f077e9a0a3f5565 761 SUPERFAMILY SSF56719 33 485 1.06E-157 T 11-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VSVS12_02588 adc2ddc86acdb7746f077e9a0a3f5565 761 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 10 744 0.0 T 11-10-2018 VSVS12_02588 adc2ddc86acdb7746f077e9a0a3f5565 761 Gene3D G3DSA:3.90.199.10 34 483 1.0E-180 T 11-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 VSVS12_02588 adc2ddc86acdb7746f077e9a0a3f5565 761 SUPERFAMILY SSF101904 499 746 6.15E-53 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal VSVS12_02588 adc2ddc86acdb7746f077e9a0a3f5565 761 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 600 632 0.33 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VSVS12_02588 adc2ddc86acdb7746f077e9a0a3f5565 761 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 647 693 1.8E-9 T 11-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 VSVS12_02588 adc2ddc86acdb7746f077e9a0a3f5565 761 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 6 745 33.812 T 11-10-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 VSVS12_02588 adc2ddc86acdb7746f077e9a0a3f5565 761 Gene3D G3DSA:2.120.10.90 502 751 2.6E-15 T 11-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal VSVS12_02588 adc2ddc86acdb7746f077e9a0a3f5565 761 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 34 470 5.1E-138 T 11-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 VSVS12_02588 adc2ddc86acdb7746f077e9a0a3f5565 761 Gene3D G3DSA:1.10.268.10 371 456 1.0E-180 T 11-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 VSVS12_02202 3f331fa9c2e4dd76218bf420e5701317 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 3.4E-29 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VSVS12_02202 3f331fa9c2e4dd76218bf420e5701317 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 3.4E-29 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VSVS12_02202 3f331fa9c2e4dd76218bf420e5701317 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 3.4E-29 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VSVS12_02202 3f331fa9c2e4dd76218bf420e5701317 460 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 3.4E-29 T 11-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 VSVS12_02202 3f331fa9c2e4dd76218bf420e5701317 460 SUPERFAMILY SSF52374 1 313 4.5E-104 T 11-10-2018 VSVS12_02202 3f331fa9c2e4dd76218bf420e5701317 460 Gene3D G3DSA:3.40.50.620 1 305 3.8E-139 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VSVS12_02202 3f331fa9c2e4dd76218bf420e5701317 460 Gene3D G3DSA:1.20.120.640 306 460 8.3E-48 T 11-10-2018 VSVS12_02202 3f331fa9c2e4dd76218bf420e5701317 460 SUPERFAMILY SSF47323 316 459 5.89E-38 T 11-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 VSVS12_02202 3f331fa9c2e4dd76218bf420e5701317 460 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 6.2E-142 T 11-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 VSVS12_02202 3f331fa9c2e4dd76218bf420e5701317 460 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 460 39.214 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 VSVS12_02202 3f331fa9c2e4dd76218bf420e5701317 460 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 459 1.2E-191 T 11-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 VSVS12_02202 3f331fa9c2e4dd76218bf420e5701317 460 Pfam PF09190 DALR domain 341 402 5.2E-24 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 VSVS12_02202 3f331fa9c2e4dd76218bf420e5701317 460 SMART SM00840 341 402 8.9E-25 T 11-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 VSVS12_01308 334b3dc85f09f5080ce13f6e2502c175 579 Pfam PF00563 EAL domain 140 370 1.1E-62 T 11-10-2018 IPR001633 EAL domain VSVS12_01308 334b3dc85f09f5080ce13f6e2502c175 579 SUPERFAMILY SSF52172 1 130 4.13E-20 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_01308 334b3dc85f09f5080ce13f6e2502c175 579 Gene3D G3DSA:3.40.50.2300 1 133 5.2E-20 T 11-10-2018 VSVS12_01308 334b3dc85f09f5080ce13f6e2502c175 579 Pfam PF00196 Bacterial regulatory proteins, luxR family 524 577 9.0E-15 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_01308 334b3dc85f09f5080ce13f6e2502c175 579 SUPERFAMILY SSF46894 518 577 2.28E-14 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VSVS12_01308 334b3dc85f09f5080ce13f6e2502c175 579 Gene3D G3DSA:3.20.20.450 134 380 2.6E-71 T 11-10-2018 IPR035919 EAL domain superfamily VSVS12_01308 334b3dc85f09f5080ce13f6e2502c175 579 Gene3D G3DSA:1.10.10.10 493 579 2.0E-15 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_01308 334b3dc85f09f5080ce13f6e2502c175 579 SMART SM00052 134 375 9.8E-61 T 11-10-2018 IPR001633 EAL domain VSVS12_01308 334b3dc85f09f5080ce13f6e2502c175 579 SMART SM00448 1 118 2.0E-9 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_01308 334b3dc85f09f5080ce13f6e2502c175 579 SUPERFAMILY SSF141868 139 383 1.83E-69 T 11-10-2018 IPR035919 EAL domain superfamily VSVS12_01308 334b3dc85f09f5080ce13f6e2502c175 579 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 525 539 5.2E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_01308 334b3dc85f09f5080ce13f6e2502c175 579 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 555 567 5.2E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_01308 334b3dc85f09f5080ce13f6e2502c175 579 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 539 555 5.2E-9 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_01308 334b3dc85f09f5080ce13f6e2502c175 579 Pfam PF00072 Response regulator receiver domain 3 117 3.0E-16 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_01308 334b3dc85f09f5080ce13f6e2502c175 579 SMART SM00421 522 579 7.5E-15 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_01308 334b3dc85f09f5080ce13f6e2502c175 579 ProSitePatterns PS00622 LuxR-type HTH domain signature. 539 566 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_00861 3c9c4297eaf18c947a3cd20941c3694b 271 Pfam PF00665 Integrase core domain 110 226 2.0E-26 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VSVS12_00861 3c9c4297eaf18c947a3cd20941c3694b 271 Gene3D G3DSA:3.30.420.10 108 252 3.4E-12 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VSVS12_00861 3c9c4297eaf18c947a3cd20941c3694b 271 Pfam PF13276 HTH-like domain 43 86 5.6E-7 T 11-10-2018 IPR025948 HTH-like domain VSVS12_00861 3c9c4297eaf18c947a3cd20941c3694b 271 SUPERFAMILY SSF53098 103 268 3.22E-34 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_02642 94a06a28a512a79b92f55d4d1da940f6 740 Gene3D G3DSA:1.10.3210.10 18 205 8.2E-36 T 11-10-2018 VSVS12_02642 94a06a28a512a79b92f55d4d1da940f6 740 SUPERFAMILY SSF55021 663 738 2.89E-9 T 11-10-2018 VSVS12_02642 94a06a28a512a79b92f55d4d1da940f6 740 Gene3D G3DSA:3.30.70.260 661 740 6.2E-15 T 11-10-2018 VSVS12_02642 94a06a28a512a79b92f55d4d1da940f6 740 Pfam PF13291 ACT domain 661 738 1.0E-15 T 11-10-2018 IPR002912 ACT domain VSVS12_02642 94a06a28a512a79b92f55d4d1da940f6 740 SUPERFAMILY SSF109604 51 205 3.45E-41 T 11-10-2018 VSVS12_02642 94a06a28a512a79b92f55d4d1da940f6 740 SUPERFAMILY SSF81301 195 407 6.05E-62 T 11-10-2018 VSVS12_02642 94a06a28a512a79b92f55d4d1da940f6 740 SUPERFAMILY SSF81271 396 462 1.26E-19 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VSVS12_02642 94a06a28a512a79b92f55d4d1da940f6 740 Gene3D G3DSA:3.30.460.10 208 340 6.6E-50 T 11-10-2018 VSVS12_02642 94a06a28a512a79b92f55d4d1da940f6 740 Pfam PF02824 TGS domain 403 462 1.2E-19 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 VSVS12_02642 94a06a28a512a79b92f55d4d1da940f6 740 Pfam PF04607 Region found in RelA / SpoT proteins 250 359 2.1E-36 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 VSVS12_02642 94a06a28a512a79b92f55d4d1da940f6 740 Gene3D G3DSA:3.10.20.30 397 470 1.2E-29 T 11-10-2018 IPR012675 Beta-grasp domain superfamily VSVS12_02642 94a06a28a512a79b92f55d4d1da940f6 740 SMART SM00954 250 360 1.9E-64 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 VSVS12_02642 94a06a28a512a79b92f55d4d1da940f6 740 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 64 738 3.5E-183 T 11-10-2018 IPR004811 RelA/SpoT family GO:0015969 VSVS12_02642 94a06a28a512a79b92f55d4d1da940f6 740 Pfam PF13328 HD domain 52 190 4.7E-36 T 11-10-2018 IPR003607 HD/PDEase domain VSVS12_03531 f2a0a3b3681aff93d9a61f76f94066c7 581 SMART SM00283 318 579 4.2E-66 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_03531 f2a0a3b3681aff93d9a61f76f94066c7 581 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 364 546 2.5E-40 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_03531 f2a0a3b3681aff93d9a61f76f94066c7 581 SUPERFAMILY SSF58104 271 580 9.42E-73 T 11-10-2018 VSVS12_03531 f2a0a3b3681aff93d9a61f76f94066c7 581 SMART SM00304 249 303 1.7E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_03531 f2a0a3b3681aff93d9a61f76f94066c7 581 Gene3D G3DSA:1.10.287.950 250 581 1.3E-67 T 11-10-2018 VSVS12_00878 0eb61f80f563337f1934ac1e4aef7c6a 383 SUPERFAMILY SSF53756 6 377 1.21E-27 T 11-10-2018 VSVS12_00878 0eb61f80f563337f1934ac1e4aef7c6a 383 Pfam PF02684 Lipid-A-disaccharide synthetase 7 373 3.2E-129 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 VSVS12_00878 0eb61f80f563337f1934ac1e4aef7c6a 383 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 3 376 1.5E-140 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 VSVS12_00878 0eb61f80f563337f1934ac1e4aef7c6a 383 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 4 378 41.732 T 11-10-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00540+2.4.1.182 VSVS12_01687 92e9fc4a304bb64fdc58ccc4c6e43c69 793 Pfam PF00122 E1-E2 ATPase 318 478 1.3E-42 T 11-10-2018 VSVS12_01687 92e9fc4a304bb64fdc58ccc4c6e43c69 793 Gene3D G3DSA:3.40.50.1000 482 720 9.1E-66 T 11-10-2018 IPR023214 HAD superfamily VSVS12_01687 92e9fc4a304bb64fdc58ccc4c6e43c69 793 Pfam PF00403 Heavy-metal-associated domain 93 154 4.4E-9 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VSVS12_01687 92e9fc4a304bb64fdc58ccc4c6e43c69 793 Gene3D G3DSA:3.30.70.100 83 156 5.3E-15 T 11-10-2018 VSVS12_01687 92e9fc4a304bb64fdc58ccc4c6e43c69 793 PRINTS PR00943 Copper-transporting ATPase signature 660 677 5.9E-6 T 11-10-2018 VSVS12_01687 92e9fc4a304bb64fdc58ccc4c6e43c69 793 PRINTS PR00943 Copper-transporting ATPase signature 276 295 5.9E-6 T 11-10-2018 VSVS12_01687 92e9fc4a304bb64fdc58ccc4c6e43c69 793 PRINTS PR00943 Copper-transporting ATPase signature 423 437 5.9E-6 T 11-10-2018 VSVS12_01687 92e9fc4a304bb64fdc58ccc4c6e43c69 793 PRINTS PR00943 Copper-transporting ATPase signature 135 155 5.9E-6 T 11-10-2018 VSVS12_01687 92e9fc4a304bb64fdc58ccc4c6e43c69 793 PRINTS PR00943 Copper-transporting ATPase signature 296 314 5.9E-6 T 11-10-2018 VSVS12_01687 92e9fc4a304bb64fdc58ccc4c6e43c69 793 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 279 761 1.7E-72 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 VSVS12_01687 92e9fc4a304bb64fdc58ccc4c6e43c69 793 SUPERFAMILY SSF55008 85 162 9.03E-19 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 VSVS12_01687 92e9fc4a304bb64fdc58ccc4c6e43c69 793 Pfam PF00702 haloacid dehalogenase-like hydrolase 497 695 3.2E-30 T 11-10-2018 VSVS12_01687 92e9fc4a304bb64fdc58ccc4c6e43c69 793 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 228 784 6.4E-155 T 11-10-2018 VSVS12_01687 92e9fc4a304bb64fdc58ccc4c6e43c69 793 Pfam PF12156 Putative metal-binding domain of cation transport ATPase 4 86 1.7E-26 T 11-10-2018 IPR021993 Putative metal-binding domain of cation transport ATPase VSVS12_01687 92e9fc4a304bb64fdc58ccc4c6e43c69 793 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 272 786 1.5E-121 T 11-10-2018 VSVS12_01687 92e9fc4a304bb64fdc58ccc4c6e43c69 793 SUPERFAMILY SSF56784 500 782 1.97E-48 T 11-10-2018 IPR036412 HAD-like superfamily VSVS12_01687 92e9fc4a304bb64fdc58ccc4c6e43c69 793 SUPERFAMILY SSF81665 253 495 4.84E-11 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 VSVS12_01687 92e9fc4a304bb64fdc58ccc4c6e43c69 793 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 353 367 4.0E-26 T 11-10-2018 VSVS12_01687 92e9fc4a304bb64fdc58ccc4c6e43c69 793 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 682 701 4.0E-26 T 11-10-2018 VSVS12_01687 92e9fc4a304bb64fdc58ccc4c6e43c69 793 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 501 515 4.0E-26 T 11-10-2018 VSVS12_01687 92e9fc4a304bb64fdc58ccc4c6e43c69 793 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 630 640 4.0E-26 T 11-10-2018 VSVS12_01687 92e9fc4a304bb64fdc58ccc4c6e43c69 793 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 705 717 4.0E-26 T 11-10-2018 VSVS12_01687 92e9fc4a304bb64fdc58ccc4c6e43c69 793 Gene3D G3DSA:3.40.1110.10 511 615 9.1E-66 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 VSVS12_01687 92e9fc4a304bb64fdc58ccc4c6e43c69 793 ProSitePatterns PS01229 Hypothetical cof family signature 2. 682 704 - T 11-10-2018 VSVS12_01687 92e9fc4a304bb64fdc58ccc4c6e43c69 793 SUPERFAMILY SSF81653 319 402 3.79E-22 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 VSVS12_01687 92e9fc4a304bb64fdc58ccc4c6e43c69 793 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 245 784 8.5E-161 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VSVS12_01687 92e9fc4a304bb64fdc58ccc4c6e43c69 793 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 503 509 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 VSVS12_01687 92e9fc4a304bb64fdc58ccc4c6e43c69 793 Gene3D G3DSA:2.70.150.20 292 407 3.1E-31 T 11-10-2018 VSVS12_03138 99f8f1f1873435ecb2e08000414c445d 296 Pfam PF03466 LysR substrate binding domain 92 291 1.8E-20 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_03138 99f8f1f1873435ecb2e08000414c445d 296 Gene3D G3DSA:3.40.190.290 96 272 1.1E-17 T 11-10-2018 VSVS12_03138 99f8f1f1873435ecb2e08000414c445d 296 Gene3D G3DSA:1.10.10.10 5 93 6.1E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_03138 99f8f1f1873435ecb2e08000414c445d 296 SUPERFAMILY SSF53850 92 293 3.12E-22 T 11-10-2018 VSVS12_03138 99f8f1f1873435ecb2e08000414c445d 296 SUPERFAMILY SSF46785 6 102 3.63E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_03138 99f8f1f1873435ecb2e08000414c445d 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 1.0E-12 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_02022 ffdff0b61bb1389f01993135035640cc 181 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 176 5.3E-64 T 11-10-2018 IPR006008 Intracellular septation protein A GO:0016021 VSVS12_02022 ffdff0b61bb1389f01993135035640cc 181 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 175 18.527 T 11-10-2018 IPR006008 Intracellular septation protein A GO:0016021 VSVS12_02022 ffdff0b61bb1389f01993135035640cc 181 Pfam PF04279 Intracellular septation protein A 1 174 4.5E-67 T 11-10-2018 IPR006008 Intracellular septation protein A GO:0016021 VSVS12_00060 63d179861ac9adb68e7beed9dc806a13 237 Gene3D G3DSA:2.40.30.10 1 102 1.6E-23 T 11-10-2018 VSVS12_00060 63d179861ac9adb68e7beed9dc806a13 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 46 53 5.6E-14 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VSVS12_00060 63d179861ac9adb68e7beed9dc806a13 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 30 42 5.6E-14 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VSVS12_00060 63d179861ac9adb68e7beed9dc806a13 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 95 104 5.6E-14 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VSVS12_00060 63d179861ac9adb68e7beed9dc806a13 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 111 130 5.6E-14 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VSVS12_00060 63d179861ac9adb68e7beed9dc806a13 237 PRINTS PR00410 Phenol hydroxylase reductase family signature 136 145 5.6E-14 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VSVS12_00060 63d179861ac9adb68e7beed9dc806a13 237 Gene3D G3DSA:3.40.50.80 103 237 1.8E-29 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VSVS12_00060 63d179861ac9adb68e7beed9dc806a13 237 Pfam PF00970 Oxidoreductase FAD-binding domain 5 99 1.2E-5 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 VSVS12_00060 63d179861ac9adb68e7beed9dc806a13 237 Pfam PF00175 Oxidoreductase NAD-binding domain 112 215 1.5E-21 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VSVS12_00060 63d179861ac9adb68e7beed9dc806a13 237 SUPERFAMILY SSF52343 104 235 1.57E-33 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VSVS12_00060 63d179861ac9adb68e7beed9dc806a13 237 SUPERFAMILY SSF63380 3 101 3.87E-18 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VSVS12_01495 1e20099ac58c42f072f2222c2bcb8c84 300 Gene3D G3DSA:1.10.10.60 55 110 9.0E-14 T 11-10-2018 VSVS12_01495 1e20099ac58c42f072f2222c2bcb8c84 300 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 60 102 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VSVS12_01495 1e20099ac58c42f072f2222c2bcb8c84 300 SMART SM00342 23 106 1.5E-28 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VSVS12_01495 1e20099ac58c42f072f2222c2bcb8c84 300 SUPERFAMILY SSF46689 6 57 1.43E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_01495 1e20099ac58c42f072f2222c2bcb8c84 300 Pfam PF06445 GyrI-like small molecule binding domain 155 298 7.9E-25 T 11-10-2018 IPR029442 GyrI-like small molecule binding domain VSVS12_01495 1e20099ac58c42f072f2222c2bcb8c84 300 SUPERFAMILY SSF46689 59 107 2.06E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_01495 1e20099ac58c42f072f2222c2bcb8c84 300 Gene3D G3DSA:1.10.10.60 10 54 7.2E-13 T 11-10-2018 VSVS12_01495 1e20099ac58c42f072f2222c2bcb8c84 300 Gene3D G3DSA:3.20.80.10 152 300 2.8E-36 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VSVS12_01495 1e20099ac58c42f072f2222c2bcb8c84 300 SMART SM00871 150 299 1.8E-21 T 11-10-2018 IPR010499 Bacterial transcription activator, effector binding VSVS12_01495 1e20099ac58c42f072f2222c2bcb8c84 300 Pfam PF12833 Helix-turn-helix domain 30 106 1.4E-21 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VSVS12_01495 1e20099ac58c42f072f2222c2bcb8c84 300 SUPERFAMILY SSF55136 155 299 1.92E-28 T 11-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily VSVS12_01960 b686a349e647954c89b56355ddb151c4 190 Pfam PF04011 LemA family 7 178 4.8E-39 T 11-10-2018 IPR007156 LemA VSVS12_01960 b686a349e647954c89b56355ddb151c4 190 SUPERFAMILY SSF140478 27 168 6.8E-35 T 11-10-2018 IPR023353 LemA-like domain superfamily VSVS12_01960 b686a349e647954c89b56355ddb151c4 190 Gene3D G3DSA:1.20.1440.20 14 185 2.6E-37 T 11-10-2018 IPR023353 LemA-like domain superfamily VSVS12_01966 aae31638f69b0fa5ee62e801c157683e 531 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 41 521 8.4E-145 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VSVS12_00065 be516a5582ed6e20fc68f1a1111a9e05 108 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VSVS12_00065 be516a5582ed6e20fc68f1a1111a9e05 108 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 2.9E-37 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VSVS12_00065 be516a5582ed6e20fc68f1a1111a9e05 108 PRINTS PR00421 Thioredoxin family signature 24 32 3.3E-10 T 11-10-2018 VSVS12_00065 be516a5582ed6e20fc68f1a1111a9e05 108 PRINTS PR00421 Thioredoxin family signature 72 83 3.3E-10 T 11-10-2018 VSVS12_00065 be516a5582ed6e20fc68f1a1111a9e05 108 PRINTS PR00421 Thioredoxin family signature 32 41 3.3E-10 T 11-10-2018 VSVS12_00065 be516a5582ed6e20fc68f1a1111a9e05 108 Gene3D G3DSA:3.40.30.10 1 108 4.8E-35 T 11-10-2018 VSVS12_00065 be516a5582ed6e20fc68f1a1111a9e05 108 Pfam PF00085 Thioredoxin 5 106 1.2E-32 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 VSVS12_00065 be516a5582ed6e20fc68f1a1111a9e05 108 PIRSF PIRSF000077 2 108 2.5E-42 T 11-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 VSVS12_00065 be516a5582ed6e20fc68f1a1111a9e05 108 SUPERFAMILY SSF52833 2 107 2.43E-38 T 11-10-2018 IPR036249 Thioredoxin-like superfamily VSVS12_02895 8cb5ed87eeee611085907a0ec75f4a89 118 Pfam PF02635 DsrE/DsrF-like family 4 118 2.1E-23 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein VSVS12_02895 8cb5ed87eeee611085907a0ec75f4a89 118 Gene3D G3DSA:3.40.1260.10 1 118 2.5E-37 T 11-10-2018 IPR027396 DsrEFH-like VSVS12_02895 8cb5ed87eeee611085907a0ec75f4a89 118 SUPERFAMILY SSF75169 3 118 2.09E-35 T 11-10-2018 IPR027396 DsrEFH-like VSVS12_02895 8cb5ed87eeee611085907a0ec75f4a89 118 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 3 118 6.7E-45 T 11-10-2018 IPR017462 Sulphur relay, TusC/DsrF VSVS12_01233 e5febc53ecacaa7d55b2c48ac3a5e162 1044 Pfam PF00575 S1 RNA binding domain 37 118 1.8E-14 T 11-10-2018 IPR003029 S1 domain GO:0003676 VSVS12_01233 e5febc53ecacaa7d55b2c48ac3a5e162 1044 Pfam PF10150 Ribonuclease E/G family 121 390 7.5E-94 T 11-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 VSVS12_01233 e5febc53ecacaa7d55b2c48ac3a5e162 1044 SUPERFAMILY SSF50249 40 124 1.39E-19 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_01233 e5febc53ecacaa7d55b2c48ac3a5e162 1044 SMART SM00316 37 119 3.5E-11 T 11-10-2018 IPR022967 RNA-binding domain, S1 VSVS12_01233 e5febc53ecacaa7d55b2c48ac3a5e162 1044 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 424 1.9E-170 T 11-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 VSVS12_01233 e5febc53ecacaa7d55b2c48ac3a5e162 1044 Gene3D G3DSA:3.40.1260.20 400 510 7.2E-39 T 11-10-2018 VSVS12_01233 e5febc53ecacaa7d55b2c48ac3a5e162 1044 Hamap MF_00970 Ribonuclease E [rne]. 1 1032 36.197 T 11-10-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 VSVS12_01233 e5febc53ecacaa7d55b2c48ac3a5e162 1044 Gene3D G3DSA:2.40.50.140 32 125 1.8E-32 T 11-10-2018 VSVS12_02080 37d5e41282fede0d3382f9f06c1fa519 289 Hamap MF_00188 Protease HtpX [htpX]. 1 288 24.774 T 11-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 VSVS12_02080 37d5e41282fede0d3382f9f06c1fa519 289 Gene3D G3DSA:3.30.2010.10 68 161 8.5E-37 T 11-10-2018 VSVS12_02080 37d5e41282fede0d3382f9f06c1fa519 289 Pfam PF01435 Peptidase family M48 78 287 1.7E-38 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 VSVS12_00757 f746d75cdc7251a15047c5062c03f1fa 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 17 32 1.4E-15 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VSVS12_00757 f746d75cdc7251a15047c5062c03f1fa 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 1.4E-15 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VSVS12_00757 f746d75cdc7251a15047c5062c03f1fa 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 36 47 1.4E-15 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VSVS12_00757 f746d75cdc7251a15047c5062c03f1fa 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 1.4E-15 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VSVS12_00757 f746d75cdc7251a15047c5062c03f1fa 98 SUPERFAMILY SSF46785 8 96 6.23E-27 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_00757 f746d75cdc7251a15047c5062c03f1fa 98 Gene3D G3DSA:1.10.10.10 1 98 8.8E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_00757 f746d75cdc7251a15047c5062c03f1fa 98 Pfam PF01022 Bacterial regulatory protein, arsR family 23 68 1.0E-17 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VSVS12_00757 f746d75cdc7251a15047c5062c03f1fa 98 SMART SM00418 15 93 2.9E-30 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VSVS12_04398 8ada75fca57e43a358967496334339a2 485 SUPERFAMILY SSF49899 240 479 4.16E-5 T 11-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily VSVS12_04398 8ada75fca57e43a358967496334339a2 485 Gene3D G3DSA:2.60.120.200 260 482 5.7E-8 T 11-10-2018 VSVS12_02009 f6e7548c74254807afdff2aaee4ce2a2 185 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VSVS12_02009 f6e7548c74254807afdff2aaee4ce2a2 185 PIRSF PIRSF000847 1 184 4.4E-46 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 VSVS12_02009 f6e7548c74254807afdff2aaee4ce2a2 185 Gene3D G3DSA:1.20.120.1760 2 181 3.7E-17 T 11-10-2018 VSVS12_02009 f6e7548c74254807afdff2aaee4ce2a2 185 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3 180 2.7E-54 T 11-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 VSVS12_02009 f6e7548c74254807afdff2aaee4ce2a2 185 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 1.4E-17 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VSVS12_01266 333f3954123b0eac7468c761bb59d190 284 TIGRFAM TIGR01858 tag_bisphos_ald: class II aldolase, tagatose bisphosphate family 3 283 6.7E-151 T 11-10-2018 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY GO:0005975|GO:0008270|GO:0009025 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395 VSVS12_01266 333f3954123b0eac7468c761bb59d190 284 SUPERFAMILY SSF51569 3 283 1.61E-101 T 11-10-2018 VSVS12_01266 333f3954123b0eac7468c761bb59d190 284 Gene3D G3DSA:3.20.20.70 2 284 1.5E-107 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_01266 333f3954123b0eac7468c761bb59d190 284 PIRSF PIRSF001359 1 284 1.9E-110 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VSVS12_01266 333f3954123b0eac7468c761bb59d190 284 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 283 2.5E-102 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VSVS12_01266 333f3954123b0eac7468c761bb59d190 284 Pfam PF01116 Fructose-bisphosphate aldolase class-II 6 283 1.6E-100 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VSVS12_01266 333f3954123b0eac7468c761bb59d190 284 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VSVS12_00011 787b847d3edb5677edc09a169b53903f 106 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 105 31.882 T 11-10-2018 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927 VSVS12_00011 787b847d3edb5677edc09a169b53903f 106 Pfam PF00581 Rhodanese-like domain 13 98 1.0E-10 T 11-10-2018 IPR001763 Rhodanese-like domain VSVS12_00011 787b847d3edb5677edc09a169b53903f 106 SMART SM00450 7 102 3.0E-15 T 11-10-2018 IPR001763 Rhodanese-like domain VSVS12_00011 787b847d3edb5677edc09a169b53903f 106 SUPERFAMILY SSF52821 1 105 4.06E-28 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily VSVS12_00011 787b847d3edb5677edc09a169b53903f 106 Gene3D G3DSA:3.40.250.10 1 101 2.4E-24 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily VSVS12_00871 80f382e500347aea7d12ca35f04b0866 402 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 3.2E-37 T 11-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VSVS12_00871 80f382e500347aea7d12ca35f04b0866 402 Gene3D G3DSA:3.40.50.720 1 150 3.2E-54 T 11-10-2018 VSVS12_00871 80f382e500347aea7d12ca35f04b0866 402 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 396 46.15 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VSVS12_00871 80f382e500347aea7d12ca35f04b0866 402 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 2.8E-47 T 11-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VSVS12_00871 80f382e500347aea7d12ca35f04b0866 402 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 391 1.8E-37 T 11-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VSVS12_00871 80f382e500347aea7d12ca35f04b0866 402 SUPERFAMILY SSF55347 126 274 1.73E-63 T 11-10-2018 VSVS12_00871 80f382e500347aea7d12ca35f04b0866 402 SUPERFAMILY SSF51735 2 150 1.4E-48 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_00871 80f382e500347aea7d12ca35f04b0866 402 PIRSF PIRSF006205 1 402 1.6E-153 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VSVS12_00871 80f382e500347aea7d12ca35f04b0866 402 Gene3D G3DSA:1.10.1740.10 312 402 3.0E-27 T 11-10-2018 VSVS12_00871 80f382e500347aea7d12ca35f04b0866 402 SUPERFAMILY SSF69055 301 399 3.01E-29 T 11-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VSVS12_00871 80f382e500347aea7d12ca35f04b0866 402 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 395 1.3E-163 T 11-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 VSVS12_01122 342d3f7e7f7cbca03b67a0592b6b1be1 93 Hamap MF_01866 Protein YcgL [ycgL]. 1 87 26.272 T 11-10-2018 IPR027354 YcgL domain VSVS12_01122 342d3f7e7f7cbca03b67a0592b6b1be1 93 Gene3D G3DSA:3.10.510.20 1 73 1.8E-29 T 11-10-2018 IPR038068 YcgL-like superfamily VSVS12_01122 342d3f7e7f7cbca03b67a0592b6b1be1 93 Pfam PF05166 YcgL domain 3 74 1.0E-30 T 11-10-2018 IPR027354 YcgL domain VSVS12_01122 342d3f7e7f7cbca03b67a0592b6b1be1 93 SUPERFAMILY SSF160191 1 91 6.02E-36 T 11-10-2018 IPR038068 YcgL-like superfamily VSVS12_01122 342d3f7e7f7cbca03b67a0592b6b1be1 93 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 73 4.0E-30 T 11-10-2018 IPR027354 YcgL domain VSVS12_03153 b79a69f204196638a1203e9d9e081f1c 476 Gene3D G3DSA:2.40.180.10 1 476 1.0E-229 T 11-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 VSVS12_03153 b79a69f204196638a1203e9d9e081f1c 476 SMART SM01060 6 390 2.2E-287 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VSVS12_03153 b79a69f204196638a1203e9d9e081f1c 476 PIRSF PIRSF038928 1 476 5.3E-221 T 11-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VSVS12_03153 b79a69f204196638a1203e9d9e081f1c 476 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 332 340 - T 11-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VSVS12_03153 b79a69f204196638a1203e9d9e081f1c 476 Pfam PF06628 Catalase-related immune-responsive 415 474 7.9E-21 T 11-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VSVS12_03153 b79a69f204196638a1203e9d9e081f1c 476 ProSitePatterns PS00438 Catalase proximal active site signature. 42 58 - T 11-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VSVS12_03153 b79a69f204196638a1203e9d9e081f1c 476 Pfam PF00199 Catalase 6 387 2.2E-190 T 11-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VSVS12_03153 b79a69f204196638a1203e9d9e081f1c 476 SUPERFAMILY SSF56634 4 475 2.22E-214 T 11-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VSVS12_03153 b79a69f204196638a1203e9d9e081f1c 476 PRINTS PR00067 Catalase signature 122 140 1.2E-72 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VSVS12_03153 b79a69f204196638a1203e9d9e081f1c 476 PRINTS PR00067 Catalase signature 103 120 1.2E-72 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VSVS12_03153 b79a69f204196638a1203e9d9e081f1c 476 PRINTS PR00067 Catalase signature 19 42 1.2E-72 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VSVS12_03153 b79a69f204196638a1203e9d9e081f1c 476 PRINTS PR00067 Catalase signature 287 314 1.2E-72 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VSVS12_03153 b79a69f204196638a1203e9d9e081f1c 476 PRINTS PR00067 Catalase signature 319 345 1.2E-72 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VSVS12_03153 b79a69f204196638a1203e9d9e081f1c 476 PRINTS PR00067 Catalase signature 82 100 1.2E-72 T 11-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 VSVS12_04326 37486c2a033a24e7a3b3cabb88e21b03 299 SUPERFAMILY SSF46785 3 112 7.76E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_04326 37486c2a033a24e7a3b3cabb88e21b03 299 SUPERFAMILY SSF53850 90 295 3.08E-49 T 11-10-2018 VSVS12_04326 37486c2a033a24e7a3b3cabb88e21b03 299 Pfam PF03466 LysR substrate binding domain 89 292 5.5E-48 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_04326 37486c2a033a24e7a3b3cabb88e21b03 299 Gene3D G3DSA:1.10.10.10 3 89 2.3E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_04326 37486c2a033a24e7a3b3cabb88e21b03 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 5.5E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_04326 37486c2a033a24e7a3b3cabb88e21b03 299 Gene3D G3DSA:3.40.190.10 163 263 1.7E-67 T 11-10-2018 VSVS12_04326 37486c2a033a24e7a3b3cabb88e21b03 299 Gene3D G3DSA:3.40.190.10 91 289 1.7E-67 T 11-10-2018 VSVS12_04326 37486c2a033a24e7a3b3cabb88e21b03 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 8.6E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_04326 37486c2a033a24e7a3b3cabb88e21b03 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 8.6E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_04326 37486c2a033a24e7a3b3cabb88e21b03 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 8.6E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_01030 7d10e037f1b4edc4c2d07d15d4d29cff 413 Gene3D G3DSA:3.90.220.20 7 404 1.1E-87 T 11-10-2018 VSVS12_01030 7d10e037f1b4edc4c2d07d15d4d29cff 413 Pfam PF01420 Type I restriction modification DNA specificity domain 213 388 2.3E-11 T 11-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 VSVS12_01030 7d10e037f1b4edc4c2d07d15d4d29cff 413 Pfam PF01420 Type I restriction modification DNA specificity domain 7 179 2.1E-12 T 11-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 VSVS12_01030 7d10e037f1b4edc4c2d07d15d4d29cff 413 Gene3D G3DSA:1.10.287.1120 153 400 1.1E-87 T 11-10-2018 VSVS12_01030 7d10e037f1b4edc4c2d07d15d4d29cff 413 SUPERFAMILY SSF116734 209 406 7.03E-40 T 11-10-2018 VSVS12_01030 7d10e037f1b4edc4c2d07d15d4d29cff 413 Gene3D G3DSA:3.90.220.20 215 357 1.1E-87 T 11-10-2018 VSVS12_01030 7d10e037f1b4edc4c2d07d15d4d29cff 413 SUPERFAMILY SSF116734 7 201 8.83E-42 T 11-10-2018 VSVS12_02949 e77fc2b864a386716dfcbb337ca6fee5 141 Pfam PF05656 Protein of unknown function (DUF805) 8 140 3.7E-22 T 11-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 VSVS12_02045 9a66d2d4ffb92165c58483996aa700df 343 Pfam PF13437 HlyD family secretion protein 154 247 1.7E-6 T 11-10-2018 VSVS12_02045 9a66d2d4ffb92165c58483996aa700df 343 Gene3D G3DSA:2.40.50.100 56 188 2.8E-72 T 11-10-2018 VSVS12_02045 9a66d2d4ffb92165c58483996aa700df 343 Gene3D G3DSA:1.10.287.470 90 149 2.8E-72 T 11-10-2018 VSVS12_02045 9a66d2d4ffb92165c58483996aa700df 343 Gene3D G3DSA:2.40.420.20 41 334 2.8E-72 T 11-10-2018 VSVS12_02045 9a66d2d4ffb92165c58483996aa700df 343 Pfam PF13533 Biotin-lipoyl like 61 104 2.6E-8 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VSVS12_02045 9a66d2d4ffb92165c58483996aa700df 343 SUPERFAMILY SSF111369 47 264 1.7E-29 T 11-10-2018 VSVS12_02045 9a66d2d4ffb92165c58483996aa700df 343 Gene3D G3DSA:2.40.30.170 42 267 2.8E-72 T 11-10-2018 VSVS12_02045 9a66d2d4ffb92165c58483996aa700df 343 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 35 337 3.6E-83 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VSVS12_00841 c7c2c4a1004a35c126521ef434f4770f 443 Pfam PF13006 Insertion element 4 transposase N-terminal 19 109 5.0E-27 T 11-10-2018 IPR024473 Transposase, IS4, N-terminal VSVS12_00841 c7c2c4a1004a35c126521ef434f4770f 443 SUPERFAMILY SSF53098 92 418 7.05E-27 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_00841 c7c2c4a1004a35c126521ef434f4770f 443 Pfam PF01609 Transposase DDE domain 129 352 1.0E-20 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_03080 08c5abbaf0643c052d6331f3140a15d3 462 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 411 427 - T 11-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 VSVS12_03080 08c5abbaf0643c052d6331f3140a15d3 462 Pfam PF00939 Sodium:sulfate symporter transmembrane region 49 461 5.2E-57 T 11-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VSVS12_03080 08c5abbaf0643c052d6331f3140a15d3 462 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 45 461 5.7E-115 T 11-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VSVS12_00819 2d42cf65c94402bd32d3d52378ce5fea 280 Gene3D G3DSA:2.40.230.20 21 280 2.1E-66 T 11-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 VSVS12_00819 2d42cf65c94402bd32d3d52378ce5fea 280 SUPERFAMILY SSF111364 35 280 4.32E-74 T 11-10-2018 IPR036777 Nucleoside-specific channel-forming protein, Tsx-like superfamily GO:0009279 VSVS12_00819 2d42cf65c94402bd32d3d52378ce5fea 280 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 29 280 7.4E-86 T 11-10-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 VSVS12_00819 2d42cf65c94402bd32d3d52378ce5fea 280 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 108 128 2.4E-7 T 11-10-2018 IPR003055 Nucleoside-specific channel-forming protein Tsx GO:0005337|GO:0009279 VSVS12_00819 2d42cf65c94402bd32d3d52378ce5fea 280 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 256 279 2.4E-7 T 11-10-2018 IPR003055 Nucleoside-specific channel-forming protein Tsx GO:0005337|GO:0009279 VSVS12_00819 2d42cf65c94402bd32d3d52378ce5fea 280 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 51 75 2.4E-7 T 11-10-2018 IPR003055 Nucleoside-specific channel-forming protein Tsx GO:0005337|GO:0009279 VSVS12_03031 5fbd168639ac4762ffac18db7e1a56b0 608 Pfam PF08308 PEGA domain 298 364 7.4E-17 T 11-10-2018 IPR013229 PEGA VSVS12_03031 5fbd168639ac4762ffac18db7e1a56b0 608 Gene3D G3DSA:3.90.1580.10 384 606 3.2E-52 T 11-10-2018 VSVS12_03031 5fbd168639ac4762ffac18db7e1a56b0 608 Pfam PF03781 Sulfatase-modifying factor enzyme 1 385 605 7.4E-46 T 11-10-2018 IPR005532 Sulfatase-modifying factor enzyme Reactome: R-HSA-1660662|Reactome: R-HSA-1663150 VSVS12_03031 5fbd168639ac4762ffac18db7e1a56b0 608 SUPERFAMILY SSF56436 384 607 1.91E-53 T 11-10-2018 IPR016187 C-type lectin fold VSVS12_00488 2889a14949d61914c378c0bb41d27377 167 Gene3D G3DSA:3.30.230.10 75 167 1.6E-36 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VSVS12_00488 2889a14949d61914c378c0bb41d27377 167 Pfam PF03719 Ribosomal protein S5, C-terminal domain 88 158 7.6E-30 T 11-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 VSVS12_00488 2889a14949d61914c378c0bb41d27377 167 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 5.1E-69 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 VSVS12_00488 2889a14949d61914c378c0bb41d27377 167 SUPERFAMILY SSF54768 8 76 5.86E-24 T 11-10-2018 VSVS12_00488 2889a14949d61914c378c0bb41d27377 167 SUPERFAMILY SSF54211 80 159 9.36E-27 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VSVS12_00488 2889a14949d61914c378c0bb41d27377 167 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 164 34.523 T 11-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 VSVS12_00488 2889a14949d61914c378c0bb41d27377 167 Pfam PF00333 Ribosomal protein S5, N-terminal domain 12 75 6.1E-29 T 11-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 VSVS12_00488 2889a14949d61914c378c0bb41d27377 167 Gene3D G3DSA:3.30.160.20 2 73 1.2E-31 T 11-10-2018 VSVS12_00488 2889a14949d61914c378c0bb41d27377 167 ProSitePatterns PS00585 Ribosomal protein S5 signature. 29 61 - T 11-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site VSVS12_01430 78c3a7dbc63f64fb8d681558cc4b1d9f 107 Pfam PF11953 Domain of unknown function (DUF3470) 67 107 2.9E-19 T 11-10-2018 IPR022569 Ferredoxin, C-terminal VSVS12_01430 78c3a7dbc63f64fb8d681558cc4b1d9f 107 SUPERFAMILY SSF54862 3 90 1.19E-22 T 11-10-2018 VSVS12_01430 78c3a7dbc63f64fb8d681558cc4b1d9f 107 Pfam PF13187 4Fe-4S dicluster domain 8 55 3.8E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VSVS12_01430 78c3a7dbc63f64fb8d681558cc4b1d9f 107 Gene3D G3DSA:3.30.70.20 2 103 9.4E-27 T 11-10-2018 VSVS12_01430 78c3a7dbc63f64fb8d681558cc4b1d9f 107 PRINTS PR00354 7Fe ferredoxin signature 9 19 5.1E-11 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 VSVS12_01430 78c3a7dbc63f64fb8d681558cc4b1d9f 107 PRINTS PR00354 7Fe ferredoxin signature 35 52 5.1E-11 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 VSVS12_01430 78c3a7dbc63f64fb8d681558cc4b1d9f 107 PRINTS PR00354 7Fe ferredoxin signature 19 29 5.1E-11 T 11-10-2018 IPR000813 7Fe ferredoxin GO:0009055 VSVS12_02763 344ab0fad31244793323a29a89e13924 560 Pfam PF00437 Type II/IV secretion system protein 185 452 4.6E-84 T 11-10-2018 IPR001482 Type II/IV secretion system protein VSVS12_02763 344ab0fad31244793323a29a89e13924 560 SUPERFAMILY SSF52540 174 556 1.03E-86 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02763 344ab0fad31244793323a29a89e13924 560 Gene3D G3DSA:3.30.300.160 56 137 2.7E-6 T 11-10-2018 VSVS12_02763 344ab0fad31244793323a29a89e13924 560 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 380 394 - T 11-10-2018 IPR001482 Type II/IV secretion system protein VSVS12_02763 344ab0fad31244793323a29a89e13924 560 Gene3D G3DSA:3.30.450.90 149 285 7.6E-43 T 11-10-2018 VSVS12_02763 344ab0fad31244793323a29a89e13924 560 TIGRFAM TIGR02538 type_IV_pilB: type IV-A pilus assembly ATPase PilB 38 556 5.1E-208 T 11-10-2018 IPR013374 ATPase, type IV, pilus assembly, PilB GO:0005524|GO:0008565|GO:0009297 VSVS12_02763 344ab0fad31244793323a29a89e13924 560 SUPERFAMILY SSF160246 4 137 5.23E-19 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily VSVS12_02763 344ab0fad31244793323a29a89e13924 560 Gene3D G3DSA:3.40.50.300 288 558 5.7E-99 T 11-10-2018 VSVS12_02763 344ab0fad31244793323a29a89e13924 560 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 39 138 3.6E-11 T 11-10-2018 IPR007831 General secretory system II, protein E, N-terminal VSVS12_02221 1c21d43b7cd9171c9b62993d9502567e 199 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 11-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 VSVS12_02221 1c21d43b7cd9171c9b62993d9502567e 199 SUPERFAMILY SSF111304 2 199 7.45E-71 T 11-10-2018 IPR023627 Recombination protein RecR VSVS12_02221 1c21d43b7cd9171c9b62993d9502567e 199 Gene3D G3DSA:1.10.8.420 1 53 1.1E-18 T 11-10-2018 VSVS12_02221 1c21d43b7cd9171c9b62993d9502567e 199 Gene3D G3DSA:3.40.1360.10 79 199 1.7E-37 T 11-10-2018 VSVS12_02221 1c21d43b7cd9171c9b62993d9502567e 199 SMART SM00493 81 166 2.1E-14 T 11-10-2018 IPR006171 TOPRIM domain VSVS12_02221 1c21d43b7cd9171c9b62993d9502567e 199 Pfam PF13662 Toprim domain 82 172 4.5E-22 T 11-10-2018 IPR006171 TOPRIM domain VSVS12_02221 1c21d43b7cd9171c9b62993d9502567e 199 TIGRFAM TIGR00615 recR: recombination protein RecR 3 197 2.5E-77 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 VSVS12_02221 1c21d43b7cd9171c9b62993d9502567e 199 Pfam PF02132 RecR protein 41 77 7.2E-15 T 11-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger VSVS12_02221 1c21d43b7cd9171c9b62993d9502567e 199 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 100.195 T 11-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 VSVS12_03022 5fde4c569bf68f26de8b1dbb394fa04f 618 SUPERFAMILY SSF52540 350 602 1.92E-90 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03022 5fde4c569bf68f26de8b1dbb394fa04f 618 Pfam PF00005 ABC transporter 379 532 4.5E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_03022 5fde4c569bf68f26de8b1dbb394fa04f 618 SUPERFAMILY SSF90123 30 344 6.67E-50 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VSVS12_03022 5fde4c569bf68f26de8b1dbb394fa04f 618 Gene3D G3DSA:1.20.1560.10 8 340 5.1E-23 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VSVS12_03022 5fde4c569bf68f26de8b1dbb394fa04f 618 ProSitePatterns PS00211 ABC transporters family signature. 504 518 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_03022 5fde4c569bf68f26de8b1dbb394fa04f 618 SMART SM00382 387 578 1.8E-18 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_03022 5fde4c569bf68f26de8b1dbb394fa04f 618 Gene3D G3DSA:3.40.50.300 347 605 1.6E-91 T 11-10-2018 VSVS12_03022 5fde4c569bf68f26de8b1dbb394fa04f 618 Pfam PF00664 ABC transporter transmembrane region 41 309 1.5E-17 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VSVS12_00302 b0a16b273b391a67e60a2e5171d408ce 162 Gene3D G3DSA:1.10.287.180 1 76 1.6E-31 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 VSVS12_00302 b0a16b273b391a67e60a2e5171d408ce 162 SUPERFAMILY SSF46557 3 78 1.03E-27 T 11-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 VSVS12_00302 b0a16b273b391a67e60a2e5171d408ce 162 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 120 136 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VSVS12_00302 b0a16b273b391a67e60a2e5171d408ce 162 SUPERFAMILY SSF54534 80 156 2.75E-19 T 11-10-2018 VSVS12_00302 b0a16b273b391a67e60a2e5171d408ce 162 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 157 53.409 T 11-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 VSVS12_00302 b0a16b273b391a67e60a2e5171d408ce 162 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 156 2.4E-22 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VSVS12_00302 b0a16b273b391a67e60a2e5171d408ce 162 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 155 28.324 T 11-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 VSVS12_00302 b0a16b273b391a67e60a2e5171d408ce 162 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 11-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 VSVS12_00302 b0a16b273b391a67e60a2e5171d408ce 162 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 1.6E-26 T 11-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 VSVS12_00302 b0a16b273b391a67e60a2e5171d408ce 162 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 3 156 6.9E-79 T 11-10-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 VSVS12_00302 b0a16b273b391a67e60a2e5171d408ce 162 PIRSF PIRSF006092 1 158 8.3E-48 T 11-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 VSVS12_00302 b0a16b273b391a67e60a2e5171d408ce 162 Gene3D G3DSA:3.10.50.30 77 159 4.2E-32 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 VSVS12_00107 e6503c6d80808f920343389ea4e96369 135 PRINTS PR00607 Class IE cytochrome C signature 106 118 2.0E-15 T 11-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VSVS12_00107 e6503c6d80808f920343389ea4e96369 135 PRINTS PR00607 Class IE cytochrome C signature 67 78 2.0E-15 T 11-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VSVS12_00107 e6503c6d80808f920343389ea4e96369 135 PRINTS PR00607 Class IE cytochrome C signature 78 88 2.0E-15 T 11-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VSVS12_00107 e6503c6d80808f920343389ea4e96369 135 PRINTS PR00607 Class IE cytochrome C signature 121 132 2.0E-15 T 11-10-2018 IPR002323 Cytochrome c, class IE GO:0005506|GO:0009055|GO:0020037 VSVS12_00107 e6503c6d80808f920343389ea4e96369 135 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 57 131 3.2E-15 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_00107 e6503c6d80808f920343389ea4e96369 135 Gene3D G3DSA:1.10.760.10 57 134 1.5E-32 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VSVS12_00107 e6503c6d80808f920343389ea4e96369 135 SUPERFAMILY SSF46626 58 132 9.12E-19 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VSVS12_01515 4cbc0b393d4a655d67511422f24cef01 552 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 3.6E-19 T 11-10-2018 VSVS12_01515 4cbc0b393d4a655d67511422f24cef01 552 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 153 178 3.6E-19 T 11-10-2018 VSVS12_01515 4cbc0b393d4a655d67511422f24cef01 552 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 242 256 3.6E-19 T 11-10-2018 VSVS12_01515 4cbc0b393d4a655d67511422f24cef01 552 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 283 290 3.6E-19 T 11-10-2018 VSVS12_01515 4cbc0b393d4a655d67511422f24cef01 552 SMART SM00450 458 552 7.3E-12 T 11-10-2018 IPR001763 Rhodanese-like domain VSVS12_01515 4cbc0b393d4a655d67511422f24cef01 552 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 298 1.7E-54 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VSVS12_01515 4cbc0b393d4a655d67511422f24cef01 552 Gene3D G3DSA:3.50.50.60 115 446 3.7E-186 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_01515 4cbc0b393d4a655d67511422f24cef01 552 SUPERFAMILY SSF51905 1 323 2.27E-40 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_01515 4cbc0b393d4a655d67511422f24cef01 552 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 4.4E-21 T 11-10-2018 VSVS12_01515 4cbc0b393d4a655d67511422f24cef01 552 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 268 290 4.4E-21 T 11-10-2018 VSVS12_01515 4cbc0b393d4a655d67511422f24cef01 552 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 241 257 4.4E-21 T 11-10-2018 VSVS12_01515 4cbc0b393d4a655d67511422f24cef01 552 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 4.4E-21 T 11-10-2018 VSVS12_01515 4cbc0b393d4a655d67511422f24cef01 552 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 4.4E-21 T 11-10-2018 VSVS12_01515 4cbc0b393d4a655d67511422f24cef01 552 SUPERFAMILY SSF52821 445 548 3.8E-22 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily VSVS12_01515 4cbc0b393d4a655d67511422f24cef01 552 Gene3D G3DSA:3.40.250.10 456 550 5.6E-24 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily VSVS12_01515 4cbc0b393d4a655d67511422f24cef01 552 Gene3D G3DSA:3.50.50.60 3 346 3.7E-186 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_01515 4cbc0b393d4a655d67511422f24cef01 552 SUPERFAMILY SSF55424 329 452 6.36E-35 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VSVS12_01515 4cbc0b393d4a655d67511422f24cef01 552 Pfam PF00581 Rhodanese-like domain 470 548 7.2E-9 T 11-10-2018 IPR001763 Rhodanese-like domain VSVS12_01515 4cbc0b393d4a655d67511422f24cef01 552 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 335 436 4.6E-16 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VSVS12_04371 a32a51b17208d97c5249d41aca8775b7 564 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_04371 a32a51b17208d97c5249d41aca8775b7 564 Pfam PF12558 ATP-binding cassette cobalt transporter 234 306 1.3E-17 T 11-10-2018 IPR022216 Putative ABC cobalt transporter VSVS12_04371 a32a51b17208d97c5249d41aca8775b7 564 Pfam PF00005 ABC transporter 20 170 2.3E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_04371 a32a51b17208d97c5249d41aca8775b7 564 ProSitePatterns PS00211 ABC transporters family signature. 433 447 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_04371 a32a51b17208d97c5249d41aca8775b7 564 Gene3D G3DSA:3.40.50.300 1 253 1.7E-67 T 11-10-2018 VSVS12_04371 a32a51b17208d97c5249d41aca8775b7 564 Pfam PF00005 ABC transporter 316 461 1.8E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_04371 a32a51b17208d97c5249d41aca8775b7 564 SUPERFAMILY SSF52540 2 234 2.34E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_04371 a32a51b17208d97c5249d41aca8775b7 564 SMART SM00382 29 221 3.2E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_04371 a32a51b17208d97c5249d41aca8775b7 564 SMART SM00382 324 510 1.1E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_04371 a32a51b17208d97c5249d41aca8775b7 564 Gene3D G3DSA:3.40.50.300 295 561 3.6E-65 T 11-10-2018 VSVS12_04371 a32a51b17208d97c5249d41aca8775b7 564 SUPERFAMILY SSF52540 283 530 7.56E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03498 304b8d4ed5b33c1ee85164679408b6d3 188 SUPERFAMILY SSF51645 20 183 2.22E-23 T 11-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VSVS12_03498 304b8d4ed5b33c1ee85164679408b6d3 188 Gene3D G3DSA:2.170.170.11 13 134 9.2E-29 T 11-10-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VSVS12_00533 48270e587c2c3249cf468c1c6b85732a 1225 Gene3D G3DSA:3.20.20.20 341 643 6.9E-130 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VSVS12_00533 48270e587c2c3249cf468c1c6b85732a 1225 SMART SM01018 658 741 1.3E-44 T 11-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VSVS12_00533 48270e587c2c3249cf468c1c6b85732a 1225 Gene3D G3DSA:3.40.50.280 745 896 8.8E-56 T 11-10-2018 VSVS12_00533 48270e587c2c3249cf468c1c6b85732a 1225 SUPERFAMILY SSF47644 654 740 1.57E-28 T 11-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VSVS12_00533 48270e587c2c3249cf468c1c6b85732a 1225 Pfam PF02574 Homocysteine S-methyltransferase 18 325 5.0E-81 T 11-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 VSVS12_00533 48270e587c2c3249cf468c1c6b85732a 1225 Gene3D G3DSA:3.20.20.330 2 339 2.6E-128 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 VSVS12_00533 48270e587c2c3249cf468c1c6b85732a 1225 TIGRFAM TIGR02082 metH: methionine synthase 13 1194 0.0 T 11-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VSVS12_00533 48270e587c2c3249cf468c1c6b85732a 1225 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 940 1210 5.7E-122 T 11-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VSVS12_00533 48270e587c2c3249cf468c1c6b85732a 1225 Pfam PF02310 B12 binding domain 749 842 4.3E-18 T 11-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 VSVS12_00533 48270e587c2c3249cf468c1c6b85732a 1225 SUPERFAMILY SSF82282 8 400 3.01E-119 T 11-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 VSVS12_00533 48270e587c2c3249cf468c1c6b85732a 1225 Gene3D G3DSA:1.10.1240.10 650 738 2.1E-40 T 11-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VSVS12_00533 48270e587c2c3249cf468c1c6b85732a 1225 SUPERFAMILY SSF56507 903 1225 4.05E-128 T 11-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VSVS12_00533 48270e587c2c3249cf468c1c6b85732a 1225 Gene3D G3DSA:3.10.196.10 909 1224 1.9E-142 T 11-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VSVS12_00533 48270e587c2c3249cf468c1c6b85732a 1225 SUPERFAMILY SSF51717 357 631 1.44E-87 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VSVS12_00533 48270e587c2c3249cf468c1c6b85732a 1225 SUPERFAMILY SSF52242 746 895 3.01E-44 T 11-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 VSVS12_00533 48270e587c2c3249cf468c1c6b85732a 1225 Pfam PF02607 B12 binding domain 660 734 6.9E-25 T 11-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VSVS12_00533 48270e587c2c3249cf468c1c6b85732a 1225 Gene3D G3DSA:1.10.288.10 938 1094 1.9E-142 T 11-10-2018 VSVS12_00533 48270e587c2c3249cf468c1c6b85732a 1225 Pfam PF00809 Pterin binding enzyme 361 599 2.5E-59 T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VSVS12_00533 48270e587c2c3249cf468c1c6b85732a 1225 PIRSF PIRSF000381 3 1197 0.0 T 11-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VSVS12_03380 2dc4482a9a52b61edbca342a7317f668 383 Gene3D G3DSA:3.40.640.10 60 273 1.6E-109 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VSVS12_03380 2dc4482a9a52b61edbca342a7317f668 383 SUPERFAMILY SSF53383 3 381 8.44E-92 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VSVS12_03380 2dc4482a9a52b61edbca342a7317f668 383 Gene3D G3DSA:3.90.1150.10 15 377 1.6E-109 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VSVS12_03380 2dc4482a9a52b61edbca342a7317f668 383 Pfam PF00155 Aminotransferase class I and II 26 375 1.9E-32 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VSVS12_02894 170eaf39047f1f8af44c9e7f115dd4ae 91 SUPERFAMILY SSF75169 1 90 1.51E-18 T 11-10-2018 IPR027396 DsrEFH-like VSVS12_02894 170eaf39047f1f8af44c9e7f115dd4ae 91 Pfam PF04077 DsrH like protein 9 86 1.5E-18 T 11-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 VSVS12_02894 170eaf39047f1f8af44c9e7f115dd4ae 91 Gene3D G3DSA:3.40.1260.10 1 90 6.7E-22 T 11-10-2018 IPR027396 DsrEFH-like VSVS12_02894 170eaf39047f1f8af44c9e7f115dd4ae 91 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 3 90 2.3E-20 T 11-10-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 VSVS12_03628 c53adf44714888b0e0c63393c0dfa9d4 321 Pfam PF03595 Voltage-dependent anion channel 11 304 2.8E-28 T 11-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 VSVS12_03628 c53adf44714888b0e0c63393c0dfa9d4 321 Gene3D G3DSA:1.50.10.150 5 314 1.6E-33 T 11-10-2018 IPR038665 Voltage-dependent anion channel superfamily VSVS12_02693 e7ed25d40591b43a1c8c6e6508a9e359 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 411 440 1.2E-6 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VSVS12_02693 e7ed25d40591b43a1c8c6e6508a9e359 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 298 327 1.2E-6 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VSVS12_02693 e7ed25d40591b43a1c8c6e6508a9e359 546 Gene3D G3DSA:1.10.287.950 226 546 2.1E-62 T 11-10-2018 VSVS12_02693 e7ed25d40591b43a1c8c6e6508a9e359 546 SMART SM00283 284 545 4.5E-59 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_02693 e7ed25d40591b43a1c8c6e6508a9e359 546 SUPERFAMILY SSF58104 264 546 3.66E-62 T 11-10-2018 VSVS12_02693 e7ed25d40591b43a1c8c6e6508a9e359 546 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 188 6.4E-8 T 11-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VSVS12_02693 e7ed25d40591b43a1c8c6e6508a9e359 546 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 356 512 1.3E-37 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_00241 a1ea511480cc6e3f95c152d5a1d6032a 204 Gene3D G3DSA:3.40.50.300 1 196 3.4E-29 T 11-10-2018 VSVS12_00241 a1ea511480cc6e3f95c152d5a1d6032a 204 Pfam PF01078 Magnesium chelatase, subunit ChlI 1 89 1.5E-29 T 11-10-2018 IPR000523 Magnesium chelatase ChlI domain VSVS12_00241 a1ea511480cc6e3f95c152d5a1d6032a 204 SUPERFAMILY SSF52540 6 197 8.11E-17 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00241 a1ea511480cc6e3f95c152d5a1d6032a 204 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 98 190 2.3E-30 T 11-10-2018 IPR025158 Mg chelatase-related protein, C-terminal domain VSVS12_02745 2cf2a2f8a8ccc9ac9a6be8e77cc3e8c9 376 TIGRFAM TIGR01109 Na_pump_decarbB: sodium ion-translocating decarboxylase, beta subunit 19 370 5.4E-172 T 11-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 VSVS12_02745 2cf2a2f8a8ccc9ac9a6be8e77cc3e8c9 376 Pfam PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit 20 374 7.6E-161 T 11-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 VSVS12_02745 2cf2a2f8a8ccc9ac9a6be8e77cc3e8c9 376 PIRSF PIRSF015658 1 376 3.6E-181 T 11-10-2018 IPR005661 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase, beta subunit GO:0006814|GO:0016829 KEGG: 00620+4.1.1.3 VSVS12_02386 323a397ef5bfdc56d5824d9e3464ad41 554 Pfam PF00733 Asparagine synthase 212 511 3.0E-96 T 11-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 VSVS12_02386 323a397ef5bfdc56d5824d9e3464ad41 554 Gene3D G3DSA:3.60.20.10 2 193 5.6E-70 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VSVS12_02386 323a397ef5bfdc56d5824d9e3464ad41 554 PIRSF PIRSF001589 1 377 1.1E-104 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 VSVS12_02386 323a397ef5bfdc56d5824d9e3464ad41 554 PIRSF PIRSF001589 362 505 3.6E-27 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 VSVS12_02386 323a397ef5bfdc56d5824d9e3464ad41 554 SUPERFAMILY SSF56235 1 196 1.97E-56 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VSVS12_02386 323a397ef5bfdc56d5824d9e3464ad41 554 Pfam PF13537 Glutamine amidotransferase domain 48 165 2.6E-39 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain VSVS12_02386 323a397ef5bfdc56d5824d9e3464ad41 554 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 371 2.7E-115 T 11-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 VSVS12_02386 323a397ef5bfdc56d5824d9e3464ad41 554 Gene3D G3DSA:3.40.50.620 194 514 5.7E-112 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VSVS12_02386 323a397ef5bfdc56d5824d9e3464ad41 554 SUPERFAMILY SSF52402 208 478 1.96E-73 T 11-10-2018 VSVS12_02232 910b2acdcbbc84146d8b74e77e11ea32 187 Pfam PF04542 Sigma-70 region 2 29 95 6.5E-18 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VSVS12_02232 910b2acdcbbc84146d8b74e77e11ea32 187 Pfam PF08281 Sigma-70, region 4 119 171 3.7E-10 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VSVS12_02232 910b2acdcbbc84146d8b74e77e11ea32 187 SUPERFAMILY SSF88946 23 104 5.23E-21 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VSVS12_02232 910b2acdcbbc84146d8b74e77e11ea32 187 Gene3D G3DSA:1.10.1740.10 15 97 3.4E-19 T 11-10-2018 VSVS12_02232 910b2acdcbbc84146d8b74e77e11ea32 187 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 51 82 - T 11-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VSVS12_02232 910b2acdcbbc84146d8b74e77e11ea32 187 SUPERFAMILY SSF88659 115 176 1.53E-11 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VSVS12_02232 910b2acdcbbc84146d8b74e77e11ea32 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 26 175 8.3E-24 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VSVS12_02232 910b2acdcbbc84146d8b74e77e11ea32 187 Gene3D G3DSA:1.10.10.10 114 177 1.0E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_01047 f981c8f8886d2bad8ae81080aac57615 241 Gene3D G3DSA:3.30.420.10 31 238 1.2E-50 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VSVS12_01047 f981c8f8886d2bad8ae81080aac57615 241 SUPERFAMILY SSF53098 32 230 4.34E-52 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_01047 f981c8f8886d2bad8ae81080aac57615 241 Pfam PF00929 Exonuclease 42 217 4.1E-38 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VSVS12_01047 f981c8f8886d2bad8ae81080aac57615 241 SMART SM00479 40 226 1.3E-26 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VSVS12_01047 f981c8f8886d2bad8ae81080aac57615 241 Hamap MF_00157 Ribonuclease T [rnt]. 1 241 114.115 T 11-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 VSVS12_01047 f981c8f8886d2bad8ae81080aac57615 241 TIGRFAM TIGR01298 RNaseT: ribonuclease T 32 231 4.9E-98 T 11-10-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 VSVS12_03756 125c8f6b76b0813a1403eeab4255b776 878 Gene3D G3DSA:3.90.550.10 270 491 1.5E-79 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VSVS12_03756 125c8f6b76b0813a1403eeab4255b776 878 PRINTS PR01439 Cellulose synthase subunit A signature 532 558 3.1E-56 T 11-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 VSVS12_03756 125c8f6b76b0813a1403eeab4255b776 878 PRINTS PR01439 Cellulose synthase subunit A signature 371 395 3.1E-56 T 11-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 VSVS12_03756 125c8f6b76b0813a1403eeab4255b776 878 PRINTS PR01439 Cellulose synthase subunit A signature 675 696 3.1E-56 T 11-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 VSVS12_03756 125c8f6b76b0813a1403eeab4255b776 878 PRINTS PR01439 Cellulose synthase subunit A signature 561 580 3.1E-56 T 11-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 VSVS12_03756 125c8f6b76b0813a1403eeab4255b776 878 PRINTS PR01439 Cellulose synthase subunit A signature 290 309 3.1E-56 T 11-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 VSVS12_03756 125c8f6b76b0813a1403eeab4255b776 878 PRINTS PR01439 Cellulose synthase subunit A signature 601 620 3.1E-56 T 11-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 VSVS12_03756 125c8f6b76b0813a1403eeab4255b776 878 PRINTS PR01439 Cellulose synthase subunit A signature 207 227 3.1E-56 T 11-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 VSVS12_03756 125c8f6b76b0813a1403eeab4255b776 878 PRINTS PR01439 Cellulose synthase subunit A signature 235 260 3.1E-56 T 11-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 VSVS12_03756 125c8f6b76b0813a1403eeab4255b776 878 Pfam PF07238 PilZ domain 702 802 4.4E-11 T 11-10-2018 IPR009875 PilZ domain GO:0035438 VSVS12_03756 125c8f6b76b0813a1403eeab4255b776 878 SUPERFAMILY SSF53448 280 556 3.84E-52 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VSVS12_03756 125c8f6b76b0813a1403eeab4255b776 878 Pfam PF00535 Glycosyl transferase family 2 286 455 1.1E-36 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VSVS12_03756 125c8f6b76b0813a1403eeab4255b776 878 Gene3D G3DSA:2.40.10.220 698 811 6.7E-10 T 11-10-2018 VSVS12_03756 125c8f6b76b0813a1403eeab4255b776 878 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 157 841 1.2E-283 T 11-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 VSVS12_03756 125c8f6b76b0813a1403eeab4255b776 878 SUPERFAMILY SSF141371 704 793 1.41E-6 T 11-10-2018 VSVS12_04361 dd97b15d17f5b3411a4a2dc0bcd7cde9 483 SUPERFAMILY SSF52425 1 172 7.19E-49 T 11-10-2018 IPR036155 Cryptochrome/photolyase, N-terminal domain superfamily Reactome: R-HSA-400253 VSVS12_04361 dd97b15d17f5b3411a4a2dc0bcd7cde9 483 PRINTS PR00147 DNA photolyase signature 139 155 5.1E-27 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VSVS12_04361 dd97b15d17f5b3411a4a2dc0bcd7cde9 483 PRINTS PR00147 DNA photolyase signature 394 408 5.1E-27 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VSVS12_04361 dd97b15d17f5b3411a4a2dc0bcd7cde9 483 PRINTS PR00147 DNA photolyase signature 355 373 5.1E-27 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VSVS12_04361 dd97b15d17f5b3411a4a2dc0bcd7cde9 483 PRINTS PR00147 DNA photolyase signature 335 351 5.1E-27 T 11-10-2018 IPR002081 Cryptochrome/DNA photolyase class 1 VSVS12_04361 dd97b15d17f5b3411a4a2dc0bcd7cde9 483 Gene3D G3DSA:1.25.40.80 130 296 1.2E-73 T 11-10-2018 VSVS12_04361 dd97b15d17f5b3411a4a2dc0bcd7cde9 483 Gene3D G3DSA:3.40.50.620 3 209 1.2E-73 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VSVS12_04361 dd97b15d17f5b3411a4a2dc0bcd7cde9 483 Pfam PF00875 DNA photolyase 3 164 3.9E-43 T 11-10-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-400253 VSVS12_04361 dd97b15d17f5b3411a4a2dc0bcd7cde9 483 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 335 347 - T 11-10-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal VSVS12_04361 dd97b15d17f5b3411a4a2dc0bcd7cde9 483 SUPERFAMILY SSF48173 204 481 1.24E-103 T 11-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 VSVS12_04361 dd97b15d17f5b3411a4a2dc0bcd7cde9 483 Pfam PF03441 FAD binding domain of DNA photolyase 285 477 7.4E-82 T 11-10-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-400253 VSVS12_04361 dd97b15d17f5b3411a4a2dc0bcd7cde9 483 Gene3D G3DSA:1.10.579.10 303 482 2.8E-79 T 11-10-2018 VSVS12_03064 f03ae3c4adcd1f7861f42ec0d3860c3f 142 PIRSF PIRSF031804 13 138 6.8E-38 T 11-10-2018 IPR016983 Uncharacterised conserved protein UCP031804 VSVS12_03064 f03ae3c4adcd1f7861f42ec0d3860c3f 142 Pfam PF06803 Protein of unknown function (DUF1232) 75 110 1.5E-13 T 11-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 VSVS12_01513 3fa1f03bc32f5ad7f66a5eead288c9fb 373 Gene3D G3DSA:1.10.530.10 188 367 4.9E-49 T 11-10-2018 VSVS12_01513 3fa1f03bc32f5ad7f66a5eead288c9fb 373 Pfam PF01464 Transglycosylase SLT domain 206 329 2.4E-25 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 VSVS12_01513 3fa1f03bc32f5ad7f66a5eead288c9fb 373 SUPERFAMILY SSF53955 183 370 2.82E-35 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily VSVS12_01513 3fa1f03bc32f5ad7f66a5eead288c9fb 373 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 223 251 - T 11-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VSVS12_02096 03aa7a71051737d5bba788478841f83f 449 Gene3D G3DSA:2.40.30.170 338 426 1.5E-11 T 11-10-2018 VSVS12_02096 03aa7a71051737d5bba788478841f83f 449 Pfam PF13437 HlyD family secretion protein 301 413 9.6E-14 T 11-10-2018 VSVS12_02096 03aa7a71051737d5bba788478841f83f 449 Gene3D G3DSA:1.10.287.470 103 134 3.6E-8 T 11-10-2018 VSVS12_02096 03aa7a71051737d5bba788478841f83f 449 Gene3D G3DSA:2.40.50.100 301 337 1.5E-11 T 11-10-2018 VSVS12_02096 03aa7a71051737d5bba788478841f83f 449 TIGRFAM TIGR01843 type_I_hlyD: type I secretion membrane fusion protein, HlyD family 29 448 7.4E-109 T 11-10-2018 IPR010129 Type I secretion membrane fusion protein, HlyD family GO:0015031|GO:0016021 VSVS12_02096 03aa7a71051737d5bba788478841f83f 449 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 346 370 6.6E-46 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VSVS12_02096 03aa7a71051737d5bba788478841f83f 449 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 428 448 6.6E-46 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VSVS12_02096 03aa7a71051737d5bba788478841f83f 449 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 313 334 6.6E-46 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VSVS12_02096 03aa7a71051737d5bba788478841f83f 449 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 38 61 6.6E-46 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VSVS12_02096 03aa7a71051737d5bba788478841f83f 449 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 370 393 6.6E-46 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VSVS12_02096 03aa7a71051737d5bba788478841f83f 449 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 413 428 6.6E-46 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VSVS12_02096 03aa7a71051737d5bba788478841f83f 449 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 80 100 6.6E-46 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VSVS12_02096 03aa7a71051737d5bba788478841f83f 449 Pfam PF13533 Biotin-lipoyl like 78 115 2.7E-6 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VSVS12_02096 03aa7a71051737d5bba788478841f83f 449 Gene3D G3DSA:1.10.287.470 246 300 1.5E-11 T 11-10-2018 VSVS12_02096 03aa7a71051737d5bba788478841f83f 449 SUPERFAMILY SSF111369 77 130 4.18E-5 T 11-10-2018 VSVS12_02096 03aa7a71051737d5bba788478841f83f 449 Gene3D G3DSA:2.40.50.100 77 102 3.6E-8 T 11-10-2018 VSVS12_01670 f6a3989e333085628069f31e5f802286 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 11-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 VSVS12_01670 f6a3989e333085628069f31e5f802286 336 Gene3D G3DSA:3.20.20.70 2 336 3.0E-143 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_01670 f6a3989e333085628069f31e5f802286 336 PIRSF PIRSF000164 10 336 1.3E-104 T 11-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 VSVS12_01670 f6a3989e333085628069f31e5f802286 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 50.871 T 11-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 VSVS12_01670 f6a3989e333085628069f31e5f802286 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 11-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 VSVS12_01670 f6a3989e333085628069f31e5f802286 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 1.2E-147 T 11-10-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 VSVS12_01670 f6a3989e333085628069f31e5f802286 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 336 1.9E-88 T 11-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 VSVS12_01670 f6a3989e333085628069f31e5f802286 336 SUPERFAMILY SSF51395 1 335 1.1E-106 T 11-10-2018 VSVS12_03987 569c30f72547ea105af47170f52a517d 172 Pfam PF00293 NUDIX domain 23 144 1.6E-14 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VSVS12_03987 569c30f72547ea105af47170f52a517d 172 ProSitePatterns PS00893 Nudix box signature. 52 73 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VSVS12_03987 569c30f72547ea105af47170f52a517d 172 SUPERFAMILY SSF55811 23 141 9.21E-20 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VSVS12_03987 569c30f72547ea105af47170f52a517d 172 Gene3D G3DSA:3.90.79.10 11 151 2.6E-24 T 11-10-2018 VSVS12_00837 98ed6da356c42775aa3c57fbb232fd89 357 Pfam PF00817 impB/mucB/samB family 14 161 4.5E-49 T 11-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 VSVS12_00837 98ed6da356c42775aa3c57fbb232fd89 357 Pfam PF11799 impB/mucB/samB family C-terminal domain 243 344 1.8E-4 T 11-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 VSVS12_00837 98ed6da356c42775aa3c57fbb232fd89 357 Gene3D G3DSA:1.10.150.20 177 235 5.8E-15 T 11-10-2018 VSVS12_00837 98ed6da356c42775aa3c57fbb232fd89 357 Gene3D G3DSA:3.30.1490.100 244 356 2.4E-25 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 VSVS12_00837 98ed6da356c42775aa3c57fbb232fd89 357 SUPERFAMILY SSF100879 248 356 4.12E-24 T 11-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 VSVS12_00837 98ed6da356c42775aa3c57fbb232fd89 357 Gene3D G3DSA:3.30.70.270 76 176 5.0E-37 T 11-10-2018 VSVS12_00837 98ed6da356c42775aa3c57fbb232fd89 357 Hamap MF_01113 DNA polymerase IV [dinB]. 8 356 36.506 T 11-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 VSVS12_00837 98ed6da356c42775aa3c57fbb232fd89 357 SUPERFAMILY SSF56672 7 241 1.96E-91 T 11-10-2018 VSVS12_00837 98ed6da356c42775aa3c57fbb232fd89 357 Gene3D G3DSA:2.30.40.20 18 75 6.3E-27 T 11-10-2018 VSVS12_02082 6911b6a0b07505c84149aeaad0e92c73 226 PIRSF PIRSF006755 1 224 3.5E-76 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 VSVS12_02082 6911b6a0b07505c84149aeaad0e92c73 226 SUPERFAMILY SSF52540 1 213 4.3E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02082 6911b6a0b07505c84149aeaad0e92c73 226 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 176 4.9E-54 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 VSVS12_02082 6911b6a0b07505c84149aeaad0e92c73 226 Pfam PF13500 AAA domain 4 211 2.1E-38 T 11-10-2018 VSVS12_02082 6911b6a0b07505c84149aeaad0e92c73 226 Gene3D G3DSA:3.40.50.300 3 224 3.5E-67 T 11-10-2018 VSVS12_02082 6911b6a0b07505c84149aeaad0e92c73 226 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 211 29.525 T 11-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 VSVS12_00875 52f00ad1163e683daee7a39dfb4cf7ed 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 179 9.4E-9 T 11-10-2018 IPR001451 Hexapeptide repeat VSVS12_00875 52f00ad1163e683daee7a39dfb4cf7ed 343 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 111 144 9.4E-10 T 11-10-2018 IPR001451 Hexapeptide repeat VSVS12_00875 52f00ad1163e683daee7a39dfb4cf7ed 343 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 1.1E-118 T 11-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 VSVS12_00875 52f00ad1163e683daee7a39dfb4cf7ed 343 Gene3D G3DSA:2.160.10.10 100 308 2.2E-63 T 11-10-2018 VSVS12_00875 52f00ad1163e683daee7a39dfb4cf7ed 343 Gene3D G3DSA:3.40.1390.10 1 99 6.7E-31 T 11-10-2018 VSVS12_00875 52f00ad1163e683daee7a39dfb4cf7ed 343 SUPERFAMILY SSF51161 32 316 3.12E-85 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily VSVS12_00875 52f00ad1163e683daee7a39dfb4cf7ed 343 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 5 326 35.129 T 11-10-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 VSVS12_00875 52f00ad1163e683daee7a39dfb4cf7ed 343 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 24 88 8.5E-22 T 11-10-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 VSVS12_00875 52f00ad1163e683daee7a39dfb4cf7ed 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 259 285 0.048 T 11-10-2018 IPR001451 Hexapeptide repeat VSVS12_02186 a245d06d79506587d6ae383a8c7ba3cc 215 SUPERFAMILY SSF89155 8 212 2.75E-51 T 11-10-2018 IPR036411 TorD-like superfamily VSVS12_02186 a245d06d79506587d6ae383a8c7ba3cc 215 Pfam PF02613 Nitrate reductase delta subunit 50 182 1.2E-35 T 11-10-2018 IPR020945 DMSO/Nitrate reductase chaperone VSVS12_02186 a245d06d79506587d6ae383a8c7ba3cc 215 Hamap MF_01150 Chaperone protein TorD [torD]. 3 212 33.372 T 11-10-2018 IPR023069 Chaperone TorD VSVS12_02186 a245d06d79506587d6ae383a8c7ba3cc 215 Gene3D G3DSA:1.20.120.1820 3 126 2.5E-38 T 11-10-2018 VSVS12_02186 a245d06d79506587d6ae383a8c7ba3cc 215 Gene3D G3DSA:1.20.1280.20 129 214 2.4E-22 T 11-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VSVS12_01612 a5a5de1e30745576f28c745124bb34af 251 Gene3D G3DSA:3.40.50.300 12 251 5.0E-53 T 11-10-2018 VSVS12_01612 a5a5de1e30745576f28c745124bb34af 251 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 1 251 44.714 T 11-10-2018 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 VSVS12_01612 a5a5de1e30745576f28c745124bb34af 251 SUPERFAMILY SSF52540 16 228 1.85E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01612 a5a5de1e30745576f28c745124bb34af 251 SMART SM00382 22 213 8.3E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_01612 a5a5de1e30745576f28c745124bb34af 251 Pfam PF00005 ABC transporter 15 164 6.2E-19 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_01983 16c65a7c5d5c854a0686fef5a369282b 232 SMART SM00866 86 225 3.8E-27 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VSVS12_01983 16c65a7c5d5c854a0686fef5a369282b 232 TIGRFAM TIGR03337 phnR: phosphonate utilization transcriptional regulator PhnR 2 229 1.6E-95 T 11-10-2018 IPR017722 Phosphonate utilization transcriptional regulator PhnR VSVS12_01983 16c65a7c5d5c854a0686fef5a369282b 232 Gene3D G3DSA:1.10.10.10 2 68 2.0E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_01983 16c65a7c5d5c854a0686fef5a369282b 232 SUPERFAMILY SSF46785 3 69 2.0E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_01983 16c65a7c5d5c854a0686fef5a369282b 232 SUPERFAMILY SSF64288 53 231 2.83E-38 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VSVS12_01983 16c65a7c5d5c854a0686fef5a369282b 232 Pfam PF07702 UTRA domain 86 222 8.4E-32 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VSVS12_01983 16c65a7c5d5c854a0686fef5a369282b 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 25 39 1.1E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VSVS12_01983 16c65a7c5d5c854a0686fef5a369282b 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 55 1.1E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VSVS12_01983 16c65a7c5d5c854a0686fef5a369282b 232 Gene3D G3DSA:3.40.1410.10 70 229 5.3E-33 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VSVS12_01983 16c65a7c5d5c854a0686fef5a369282b 232 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 65 3.9E-18 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VSVS12_01983 16c65a7c5d5c854a0686fef5a369282b 232 SMART SM00345 6 65 2.9E-16 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VSVS12_02663 776731a5eb489846bc3a38aa74779bcd 392 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 5 388 2.8E-153 T 11-10-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 VSVS12_02663 776731a5eb489846bc3a38aa74779bcd 392 Gene3D G3DSA:3.30.9.50 81 270 2.4E-97 T 11-10-2018 VSVS12_02663 776731a5eb489846bc3a38aa74779bcd 392 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 387 4.9E-127 T 11-10-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 VSVS12_02663 776731a5eb489846bc3a38aa74779bcd 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 7.0E-11 T 11-10-2018 VSVS12_02663 776731a5eb489846bc3a38aa74779bcd 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 7.0E-11 T 11-10-2018 VSVS12_02663 776731a5eb489846bc3a38aa74779bcd 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 7.0E-11 T 11-10-2018 VSVS12_02663 776731a5eb489846bc3a38aa74779bcd 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 7.0E-11 T 11-10-2018 VSVS12_02663 776731a5eb489846bc3a38aa74779bcd 392 SUPERFAMILY SSF51905 3 382 9.07E-50 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_02663 776731a5eb489846bc3a38aa74779bcd 392 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 11-10-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 VSVS12_02663 776731a5eb489846bc3a38aa74779bcd 392 Pfam PF01494 FAD binding domain 4 338 3.3E-28 T 11-10-2018 IPR002938 FAD-binding domain GO:0071949 VSVS12_02663 776731a5eb489846bc3a38aa74779bcd 392 Gene3D G3DSA:3.50.50.60 5 336 2.4E-97 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_02616 661acfdb7cb9a87511980678e948857d 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_02616 661acfdb7cb9a87511980678e948857d 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 11 88 4.0E-38 T 11-10-2018 VSVS12_02616 661acfdb7cb9a87511980678e948857d 89 SUPERFAMILY SSF47060 3 89 2.59E-34 T 11-10-2018 IPR009068 S15/NS1, RNA-binding VSVS12_02616 661acfdb7cb9a87511980678e948857d 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 4.0E-38 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02616 661acfdb7cb9a87511980678e948857d 89 SMART SM01387 8 88 1.3E-51 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_02616 661acfdb7cb9a87511980678e948857d 89 Pfam PF00312 Ribosomal protein S15 8 88 1.1E-35 T 11-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_02616 661acfdb7cb9a87511980678e948857d 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 21.244 T 11-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02616 661acfdb7cb9a87511980678e948857d 89 Gene3D G3DSA:1.10.287.10 2 89 1.3E-34 T 11-10-2018 VSVS12_03521 b84a43f1a422b20e9f300150ad5444cb 476 Gene3D G3DSA:3.30.360.10 287 452 2.6E-114 T 11-10-2018 VSVS12_03521 b84a43f1a422b20e9f300150ad5444cb 476 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 128 238 7.9E-21 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_03521 b84a43f1a422b20e9f300150ad5444cb 476 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 293 450 1.6E-43 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_03521 b84a43f1a422b20e9f300150ad5444cb 476 SUPERFAMILY SSF55347 288 451 3.57E-51 T 11-10-2018 VSVS12_03521 b84a43f1a422b20e9f300150ad5444cb 476 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 406 421 1.4E-18 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_03521 b84a43f1a422b20e9f300150ad5444cb 476 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 246 259 1.4E-18 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_03521 b84a43f1a422b20e9f300150ad5444cb 476 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 309 325 1.4E-18 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_03521 b84a43f1a422b20e9f300150ad5444cb 476 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 282 300 1.4E-18 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_03521 b84a43f1a422b20e9f300150ad5444cb 476 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 365 382 1.4E-18 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_03521 b84a43f1a422b20e9f300150ad5444cb 476 SMART SM00846 127 288 2.7E-54 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_03521 b84a43f1a422b20e9f300150ad5444cb 476 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 286 293 - T 11-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_03521 b84a43f1a422b20e9f300150ad5444cb 476 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 129 462 7.6E-113 T 11-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_03521 b84a43f1a422b20e9f300150ad5444cb 476 SUPERFAMILY SSF51735 128 304 6.67E-44 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_03521 b84a43f1a422b20e9f300150ad5444cb 476 Gene3D G3DSA:3.40.50.720 129 462 2.6E-114 T 11-10-2018 VSVS12_00219 d4c2befa8bde908539f5e95194a665ed 326 SUPERFAMILY SSF51735 116 289 1.19E-35 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_00219 d4c2befa8bde908539f5e95194a665ed 326 Pfam PF00107 Zinc-binding dehydrogenase 159 272 1.9E-11 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VSVS12_00219 d4c2befa8bde908539f5e95194a665ed 326 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 3 326 1.2E-138 T 11-10-2018 IPR014188 Acrylyl-CoA reductase AcuI VSVS12_00219 d4c2befa8bde908539f5e95194a665ed 326 SMART SM00829 13 324 1.5E-5 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VSVS12_00219 d4c2befa8bde908539f5e95194a665ed 326 Gene3D G3DSA:3.90.180.10 17 325 2.8E-124 T 11-10-2018 VSVS12_00219 d4c2befa8bde908539f5e95194a665ed 326 Gene3D G3DSA:3.40.50.720 126 294 2.8E-124 T 11-10-2018 VSVS12_00219 d4c2befa8bde908539f5e95194a665ed 326 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 87 1.1E-4 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VSVS12_00219 d4c2befa8bde908539f5e95194a665ed 326 SUPERFAMILY SSF50129 2 146 1.98E-44 T 11-10-2018 IPR011032 GroES-like superfamily VSVS12_00205 ee25fa4d8885657459a2ff4d48757dd3 223 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 112 4.7E-24 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VSVS12_00205 ee25fa4d8885657459a2ff4d48757dd3 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 216 1.3E-18 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VSVS12_00205 ee25fa4d8885657459a2ff4d48757dd3 223 SUPERFAMILY SSF161098 13 203 1.02E-42 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_00205 ee25fa4d8885657459a2ff4d48757dd3 223 Gene3D G3DSA:1.10.3720.10 1 222 1.1E-52 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_01264 bb9f69b10631a507b3a9c042863c7dea 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VSVS12_01264 bb9f69b10631a507b3a9c042863c7dea 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 1.4E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01264 bb9f69b10631a507b3a9c042863c7dea 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 1.4E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01264 bb9f69b10631a507b3a9c042863c7dea 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 1.4E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01264 bb9f69b10631a507b3a9c042863c7dea 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 1.4E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01264 bb9f69b10631a507b3a9c042863c7dea 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 1.4E-20 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01264 bb9f69b10631a507b3a9c042863c7dea 247 Pfam PF00106 short chain dehydrogenase 13 209 1.5E-50 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01264 bb9f69b10631a507b3a9c042863c7dea 247 SUPERFAMILY SSF51735 9 242 4.95E-62 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_01264 bb9f69b10631a507b3a9c042863c7dea 247 Gene3D G3DSA:3.40.50.720 1 246 1.3E-70 T 11-10-2018 VSVS12_02370 5b9f6bbd3ceb8558b40196965e297892 429 Gene3D G3DSA:2.20.28.60 1 50 5.7E-26 T 11-10-2018 VSVS12_02370 5b9f6bbd3ceb8558b40196965e297892 429 PRINTS PR00143 Citrate synthase signature 241 269 3.6E-55 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 VSVS12_02370 5b9f6bbd3ceb8558b40196965e297892 429 PRINTS PR00143 Citrate synthase signature 296 316 3.6E-55 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 VSVS12_02370 5b9f6bbd3ceb8558b40196965e297892 429 PRINTS PR00143 Citrate synthase signature 219 234 3.6E-55 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 VSVS12_02370 5b9f6bbd3ceb8558b40196965e297892 429 PRINTS PR00143 Citrate synthase signature 359 375 3.6E-55 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 VSVS12_02370 5b9f6bbd3ceb8558b40196965e297892 429 PRINTS PR00143 Citrate synthase signature 165 178 3.6E-55 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 VSVS12_02370 5b9f6bbd3ceb8558b40196965e297892 429 PRINTS PR00143 Citrate synthase signature 379 393 3.6E-55 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 VSVS12_02370 5b9f6bbd3ceb8558b40196965e297892 429 Pfam PF00285 Citrate synthase, C-terminal domain 49 411 1.3E-133 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 VSVS12_02370 5b9f6bbd3ceb8558b40196965e297892 429 Gene3D G3DSA:1.10.580.10 57 411 5.6E-149 T 11-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 VSVS12_02370 5b9f6bbd3ceb8558b40196965e297892 429 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 16 422 6.3E-239 T 11-10-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 VSVS12_02370 5b9f6bbd3ceb8558b40196965e297892 429 PIRSF PIRSF001369 38 429 1.1E-173 T 11-10-2018 IPR024176 Citrate synthase, bacterial-type VSVS12_02370 5b9f6bbd3ceb8558b40196965e297892 429 Gene3D G3DSA:1.10.230.10 268 376 5.6E-149 T 11-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain VSVS12_02370 5b9f6bbd3ceb8558b40196965e297892 429 SUPERFAMILY SSF48256 6 428 1.16E-168 T 11-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 VSVS12_02370 5b9f6bbd3ceb8558b40196965e297892 429 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 11-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 VSVS12_01287 d206e780e93e41fd6fb4fc10650a8d9c 288 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 126 146 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 VSVS12_01287 d206e780e93e41fd6fb4fc10650a8d9c 288 Gene3D G3DSA:1.10.12.10 226 276 6.3E-31 T 11-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal VSVS12_01287 d206e780e93e41fd6fb4fc10650a8d9c 288 SUPERFAMILY SSF52096 21 284 1.25E-79 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VSVS12_01287 d206e780e93e41fd6fb4fc10650a8d9c 288 TIGRFAM TIGR01929 menB: naphthoate synthase 25 284 1.1E-144 T 11-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 VSVS12_01287 d206e780e93e41fd6fb4fc10650a8d9c 288 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 18 287 56.293 T 11-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 VSVS12_01287 d206e780e93e41fd6fb4fc10650a8d9c 288 Gene3D G3DSA:3.90.226.10 3 225 4.4E-85 T 11-10-2018 VSVS12_01287 d206e780e93e41fd6fb4fc10650a8d9c 288 Pfam PF00378 Enoyl-CoA hydratase/isomerase 34 282 1.6E-78 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 VSVS12_04263 b1101e5cada934ef4a9bf0c30ca99548 204 Gene3D G3DSA:1.10.260.80 27 78 1.2E-48 T 11-10-2018 VSVS12_04263 b1101e5cada934ef4a9bf0c30ca99548 204 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 79 169 1.1E-6 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VSVS12_04263 b1101e5cada934ef4a9bf0c30ca99548 204 Pfam PF13419 Haloacid dehalogenase-like hydrolase 18 174 5.0E-14 T 11-10-2018 VSVS12_04263 b1101e5cada934ef4a9bf0c30ca99548 204 SUPERFAMILY SSF56784 9 202 8.27E-29 T 11-10-2018 IPR036412 HAD-like superfamily VSVS12_04263 b1101e5cada934ef4a9bf0c30ca99548 204 Gene3D G3DSA:3.40.50.1000 15 190 1.2E-48 T 11-10-2018 IPR023214 HAD superfamily VSVS12_00143 93f12d4530f2752b7af9af633d6ff0b5 474 Gene3D G3DSA:3.40.50.300 116 283 1.5E-15 T 11-10-2018 VSVS12_00143 93f12d4530f2752b7af9af633d6ff0b5 474 SUPERFAMILY SSF52540 122 269 2.12E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00143 93f12d4530f2752b7af9af633d6ff0b5 474 Pfam PF13401 AAA domain 127 270 4.0E-22 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_00897 b1de2a314bb3398f5857e12d6fb75bc3 571 Gene3D G3DSA:3.90.960.10 240 389 1.1E-231 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VSVS12_00897 b1de2a314bb3398f5857e12d6fb75bc3 571 Pfam PF04073 Aminoacyl-tRNA editing domain 257 378 4.6E-25 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VSVS12_00897 b1de2a314bb3398f5857e12d6fb75bc3 571 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 568 4.0E-242 T 11-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VSVS12_00897 b1de2a314bb3398f5857e12d6fb75bc3 571 SUPERFAMILY SSF55681 10 478 8.67E-96 T 11-10-2018 VSVS12_00897 b1de2a314bb3398f5857e12d6fb75bc3 571 SUPERFAMILY SSF52954 463 569 9.36E-32 T 11-10-2018 VSVS12_00897 b1de2a314bb3398f5857e12d6fb75bc3 571 Gene3D G3DSA:3.30.930.10 11 465 1.1E-231 T 11-10-2018 VSVS12_00897 b1de2a314bb3398f5857e12d6fb75bc3 571 Gene3D G3DSA:3.40.50.800 4 555 1.1E-231 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily VSVS12_00897 b1de2a314bb3398f5857e12d6fb75bc3 571 Pfam PF03129 Anticodon binding domain 475 568 2.2E-20 T 11-10-2018 IPR004154 Anticodon-binding VSVS12_00897 b1de2a314bb3398f5857e12d6fb75bc3 571 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 40.682 T 11-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VSVS12_00897 b1de2a314bb3398f5857e12d6fb75bc3 571 PIRSF PIRSF001535 1 571 2.7E-263 T 11-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 VSVS12_00897 b1de2a314bb3398f5857e12d6fb75bc3 571 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 6.6E-41 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VSVS12_00897 b1de2a314bb3398f5857e12d6fb75bc3 571 SUPERFAMILY SSF55826 218 390 1.7E-30 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VSVS12_00897 b1de2a314bb3398f5857e12d6fb75bc3 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 2.4E-16 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 VSVS12_00897 b1de2a314bb3398f5857e12d6fb75bc3 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 2.4E-16 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 VSVS12_00897 b1de2a314bb3398f5857e12d6fb75bc3 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 2.4E-16 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 VSVS12_00897 b1de2a314bb3398f5857e12d6fb75bc3 571 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 2.4E-16 T 11-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 VSVS12_01816 7f9fc41c2c8287ae0e27c98b869bb400 627 SUPERFAMILY SSF103190 107 175 3.4E-9 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VSVS12_01816 7f9fc41c2c8287ae0e27c98b869bb400 627 Gene3D G3DSA:3.30.450.20 64 168 1.5E-51 T 11-10-2018 VSVS12_01816 7f9fc41c2c8287ae0e27c98b869bb400 627 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 411 592 7.3E-38 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_01816 7f9fc41c2c8287ae0e27c98b869bb400 627 Gene3D G3DSA:1.10.287.950 296 627 1.9E-68 T 11-10-2018 VSVS12_01816 7f9fc41c2c8287ae0e27c98b869bb400 627 Gene3D G3DSA:3.30.450.20 55 267 1.5E-51 T 11-10-2018 VSVS12_01816 7f9fc41c2c8287ae0e27c98b869bb400 627 Pfam PF00672 HAMP domain 301 346 5.6E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_01816 7f9fc41c2c8287ae0e27c98b869bb400 627 SUPERFAMILY SSF58104 318 627 4.71E-72 T 11-10-2018 VSVS12_01816 7f9fc41c2c8287ae0e27c98b869bb400 627 SMART SM00304 296 350 5.2E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_01816 7f9fc41c2c8287ae0e27c98b869bb400 627 SMART SM00304 351 403 29.0 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_01816 7f9fc41c2c8287ae0e27c98b869bb400 627 Pfam PF02743 Cache domain 43 258 1.3E-27 T 11-10-2018 IPR033479 Double Cache domain 1 VSVS12_01816 7f9fc41c2c8287ae0e27c98b869bb400 627 SMART SM00283 365 626 3.1E-59 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_03355 a5496cc6a800f9552fa7b551a595b4d5 763 Gene3D G3DSA:3.90.1150.10 449 638 3.6E-77 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VSVS12_03355 a5496cc6a800f9552fa7b551a595b4d5 763 PIRSF PIRSF009393 5 763 2.7E-256 T 11-10-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 VSVS12_03355 a5496cc6a800f9552fa7b551a595b4d5 763 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 623 752 1.1E-42 T 11-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 VSVS12_03355 a5496cc6a800f9552fa7b551a595b4d5 763 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 389 403 - T 11-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 VSVS12_03355 a5496cc6a800f9552fa7b551a595b4d5 763 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 147 598 4.7E-167 T 11-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 VSVS12_03355 a5496cc6a800f9552fa7b551a595b4d5 763 Gene3D G3DSA:3.90.100.10 639 763 1.0E-45 T 11-10-2018 VSVS12_03355 a5496cc6a800f9552fa7b551a595b4d5 763 SUPERFAMILY SSF53383 147 616 8.84E-97 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VSVS12_03355 a5496cc6a800f9552fa7b551a595b4d5 763 Gene3D G3DSA:3.40.640.10 147 448 3.6E-88 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VSVS12_03355 a5496cc6a800f9552fa7b551a595b4d5 763 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 24 141 3.8E-23 T 11-10-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 VSVS12_03355 a5496cc6a800f9552fa7b551a595b4d5 763 Gene3D G3DSA:3.40.50.2300 9 146 4.9E-43 T 11-10-2018 VSVS12_03355 a5496cc6a800f9552fa7b551a595b4d5 763 SUPERFAMILY SSF55904 618 763 7.06E-33 T 11-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 VSVS12_02567 81e29b90927ac43a101a8f152fee6971 575 SUPERFAMILY SSF56601 188 571 9.18E-95 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VSVS12_02567 81e29b90927ac43a101a8f152fee6971 575 Gene3D G3DSA:3.90.1310.30 60 235 1.4E-42 T 11-10-2018 VSVS12_02567 81e29b90927ac43a101a8f152fee6971 575 Gene3D G3DSA:3.30.450.330 237 561 6.2E-108 T 11-10-2018 VSVS12_02567 81e29b90927ac43a101a8f152fee6971 575 Pfam PF00905 Penicillin binding protein transpeptidase domain 261 557 4.3E-81 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VSVS12_02567 81e29b90927ac43a101a8f152fee6971 575 Hamap MF_02080 Peptidoglycan D,D-transpeptidase FtsI [ftsI]. 20 572 45.332 T 11-10-2018 IPR037532 Peptidoglycan D,D-transpeptidase FtsI GO:0005887|GO:0008658|GO:0008955|GO:0009252|GO:0051301 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 VSVS12_02567 81e29b90927ac43a101a8f152fee6971 575 Pfam PF03717 Penicillin-binding Protein dimerisation domain 70 222 7.4E-18 T 11-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 VSVS12_02567 81e29b90927ac43a101a8f152fee6971 575 Gene3D G3DSA:3.40.710.10 297 479 6.2E-108 T 11-10-2018 VSVS12_02567 81e29b90927ac43a101a8f152fee6971 575 SUPERFAMILY SSF56519 64 235 3.4E-43 T 11-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 VSVS12_03334 e1a98bfebd27754565adfab48ae6c730 893 SUPERFAMILY SSF74650 366 879 1.38E-38 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VSVS12_03334 e1a98bfebd27754565adfab48ae6c730 893 Pfam PF01074 Glycosyl hydrolases family 38 N-terminal domain 3 266 1.8E-37 T 11-10-2018 IPR000602 Glycoside hydrolase family 38, N-terminal domain GO:0004559|GO:0006013 VSVS12_03334 e1a98bfebd27754565adfab48ae6c730 893 Pfam PF09261 Alpha mannosidase middle domain 284 354 8.8E-6 T 11-10-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 VSVS12_03334 e1a98bfebd27754565adfab48ae6c730 893 Gene3D G3DSA:3.20.110.10 1 274 9.7E-91 T 11-10-2018 IPR027291 Glycoside hydrolase 38, N-terminal domain superfamily VSVS12_03334 e1a98bfebd27754565adfab48ae6c730 893 Gene3D G3DSA:2.70.98.30 484 772 8.9E-51 T 11-10-2018 VSVS12_03334 e1a98bfebd27754565adfab48ae6c730 893 SMART SM00872 277 355 5.4E-5 T 11-10-2018 IPR015341 Glycoside hydrolase family 38, central domain GO:0004559|GO:0006013 VSVS12_03334 e1a98bfebd27754565adfab48ae6c730 893 Pfam PF07748 Glycosyl hydrolases family 38 C-terminal domain 383 644 6.7E-7 T 11-10-2018 IPR011682 Glycosyl hydrolase family 38, C-terminal GO:0004559|GO:0006013 VSVS12_03334 e1a98bfebd27754565adfab48ae6c730 893 SUPERFAMILY SSF88688 286 375 8.5E-7 T 11-10-2018 IPR028995 Glycoside hydrolase families 57/38, central domain superfamily VSVS12_03334 e1a98bfebd27754565adfab48ae6c730 893 Gene3D G3DSA:1.20.1270.50 281 378 5.7E-24 T 11-10-2018 IPR037094 Glycoside hydrolase family 38, central domain superfamily GO:0004559|GO:0006013 VSVS12_03334 e1a98bfebd27754565adfab48ae6c730 893 SUPERFAMILY SSF88713 2 270 7.23E-50 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VSVS12_03822 9755a99dee9e06bd1c57da0602abb278 594 TIGRFAM TIGR01838 PHA_synth_I: poly(R)-hydroxyalkanoic acid synthase, class I 55 584 3.2E-250 T 11-10-2018 IPR010963 Poly(R)-hydroxyalkanoic acid synthase, class I GO:0005737|GO:0016746|GO:0042619 VSVS12_03822 9755a99dee9e06bd1c57da0602abb278 594 Gene3D G3DSA:3.40.50.1820 233 516 3.4E-9 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold VSVS12_03822 9755a99dee9e06bd1c57da0602abb278 594 SUPERFAMILY SSF53474 224 525 7.13E-34 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold VSVS12_03822 9755a99dee9e06bd1c57da0602abb278 594 Pfam PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus 95 266 2.9E-71 T 11-10-2018 IPR010941 Poly-beta-hydroxybutyrate polymerase, N-terminal domain GO:0042619 VSVS12_01838 f44b9069f68b81019ca5b39590c57540 474 Pfam PF11066 Protein of unknown function (DUF2867) 335 465 1.2E-11 T 11-10-2018 IPR021295 Protein of unknown function DUF2867 VSVS12_01838 f44b9069f68b81019ca5b39590c57540 474 Gene3D G3DSA:3.40.50.720 2 265 2.4E-31 T 11-10-2018 VSVS12_01838 f44b9069f68b81019ca5b39590c57540 474 SUPERFAMILY SSF51735 1 292 7.15E-41 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_01838 f44b9069f68b81019ca5b39590c57540 474 Pfam PF13460 NAD(P)H-binding 8 150 1.8E-12 T 11-10-2018 IPR016040 NAD(P)-binding domain VSVS12_01853 790d09748c52936bf775d3c6fdffc531 446 Gene3D G3DSA:3.30.565.10 306 445 2.7E-26 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_01853 790d09748c52936bf775d3c6fdffc531 446 SMART SM00387 339 446 3.1E-18 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_01853 790d09748c52936bf775d3c6fdffc531 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 389 8.2E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_01853 790d09748c52936bf775d3c6fdffc531 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 406 424 8.2E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_01853 790d09748c52936bf775d3c6fdffc531 446 SUPERFAMILY SSF47384 221 284 4.51E-5 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VSVS12_01853 790d09748c52936bf775d3c6fdffc531 446 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 340 444 5.1E-12 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_01853 790d09748c52936bf775d3c6fdffc531 446 SUPERFAMILY SSF55874 306 442 6.29E-25 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_01674 19910823ffef58c7644bda033927240a 638 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_01674 19910823ffef58c7644bda033927240a 638 Gene3D G3DSA:1.10.287.380 554 637 1.3E-27 T 11-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 VSVS12_01674 19910823ffef58c7644bda033927240a 638 Pfam PF00005 ABC transporter 336 469 1.2E-23 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_01674 19910823ffef58c7644bda033927240a 638 Pfam PF16326 ABC transporter C-terminal domain 564 632 5.7E-20 T 11-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 VSVS12_01674 19910823ffef58c7644bda033927240a 638 SUPERFAMILY SSF52540 311 528 2.42E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01674 19910823ffef58c7644bda033927240a 638 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_01674 19910823ffef58c7644bda033927240a 638 Pfam PF00005 ABC transporter 19 185 6.4E-24 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_01674 19910823ffef58c7644bda033927240a 638 SMART SM00382 28 230 6.8E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_01674 19910823ffef58c7644bda033927240a 638 SMART SM00382 344 514 7.5E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_01674 19910823ffef58c7644bda033927240a 638 SUPERFAMILY SSF52540 3 241 3.67E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01674 19910823ffef58c7644bda033927240a 638 Gene3D G3DSA:3.40.50.300 282 548 1.7E-64 T 11-10-2018 VSVS12_01674 19910823ffef58c7644bda033927240a 638 Pfam PF12848 ABC transporter 224 294 6.3E-11 T 11-10-2018 IPR032781 ABC-transporter extension domain VSVS12_01674 19910823ffef58c7644bda033927240a 638 Gene3D G3DSA:3.40.50.300 6 279 6.6E-69 T 11-10-2018 VSVS12_00733 2f24199ada809b8d94ef71a481569209 495 Gene3D G3DSA:2.40.50.140 135 198 6.1E-17 T 11-10-2018 VSVS12_00733 2f24199ada809b8d94ef71a481569209 495 Gene3D G3DSA:3.30.1480.10 1 129 1.8E-43 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 VSVS12_00733 2f24199ada809b8d94ef71a481569209 495 SMART SM00322 230 293 35.0 T 11-10-2018 IPR004087 K Homology domain GO:0003676 VSVS12_00733 2f24199ada809b8d94ef71a481569209 495 SMART SM00322 301 358 0.015 T 11-10-2018 IPR004087 K Homology domain GO:0003676 VSVS12_00733 2f24199ada809b8d94ef71a481569209 495 Gene3D G3DSA:1.10.150.20 352 421 2.5E-28 T 11-10-2018 VSVS12_00733 2f24199ada809b8d94ef71a481569209 495 SMART SM00316 133 200 1.9E-4 T 11-10-2018 IPR022967 RNA-binding domain, S1 VSVS12_00733 2f24199ada809b8d94ef71a481569209 495 SUPERFAMILY SSF50249 132 199 4.46E-16 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_00733 2f24199ada809b8d94ef71a481569209 495 Pfam PF14520 Helix-hairpin-helix domain 432 486 7.9E-8 T 11-10-2018 VSVS12_00733 2f24199ada809b8d94ef71a481569209 495 SUPERFAMILY SSF69705 1 126 4.05E-40 T 11-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 VSVS12_00733 2f24199ada809b8d94ef71a481569209 495 SUPERFAMILY SSF54814 201 278 1.24E-28 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 VSVS12_00733 2f24199ada809b8d94ef71a481569209 495 Gene3D G3DSA:3.30.300.20 278 345 1.2E-24 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta VSVS12_00733 2f24199ada809b8d94ef71a481569209 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 410 28.836 T 11-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 VSVS12_00733 2f24199ada809b8d94ef71a481569209 495 Pfam PF13184 NusA-like KH domain 230 297 4.9E-27 T 11-10-2018 IPR025249 KH domain, NusA-like GO:0003723 VSVS12_00733 2f24199ada809b8d94ef71a481569209 495 SUPERFAMILY SSF47794 429 492 1.15E-15 T 11-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 VSVS12_00733 2f24199ada809b8d94ef71a481569209 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 440 489 4.3E-17 T 11-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication VSVS12_00733 2f24199ada809b8d94ef71a481569209 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 2.7E-22 T 11-10-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication VSVS12_00733 2f24199ada809b8d94ef71a481569209 495 Gene3D G3DSA:3.30.300.20 199 277 2.4E-30 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta VSVS12_00733 2f24199ada809b8d94ef71a481569209 495 SUPERFAMILY SSF54814 279 343 2.05E-15 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 VSVS12_00733 2f24199ada809b8d94ef71a481569209 495 Pfam PF08529 NusA N-terminal domain 4 123 7.3E-35 T 11-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 VSVS12_00733 2f24199ada809b8d94ef71a481569209 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 1.8E-124 T 11-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 VSVS12_00733 2f24199ada809b8d94ef71a481569209 495 SUPERFAMILY SSF47794 356 415 1.43E-16 T 11-10-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 VSVS12_00733 2f24199ada809b8d94ef71a481569209 495 Gene3D G3DSA:1.10.150.20 431 490 1.0E-23 T 11-10-2018 VSVS12_00425 bbbb3eda138e6d344208947d49b65e10 379 Pfam PF07687 Peptidase dimerisation domain 174 285 4.0E-25 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain VSVS12_00425 bbbb3eda138e6d344208947d49b65e10 379 SUPERFAMILY SSF55031 177 291 8.07E-23 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VSVS12_00425 bbbb3eda138e6d344208947d49b65e10 379 Gene3D G3DSA:3.40.630.10 29 360 3.8E-80 T 11-10-2018 VSVS12_00425 bbbb3eda138e6d344208947d49b65e10 379 SUPERFAMILY SSF53187 3 377 7.43E-54 T 11-10-2018 VSVS12_00425 bbbb3eda138e6d344208947d49b65e10 379 Hamap MF_01108 Acetylornithine deacetylase [argE]. 1 378 62.686 T 11-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 VSVS12_00425 bbbb3eda138e6d344208947d49b65e10 379 Pfam PF01546 Peptidase family M20/M25/M40 72 374 1.9E-32 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 VSVS12_00425 bbbb3eda138e6d344208947d49b65e10 379 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 106 143 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VSVS12_00425 bbbb3eda138e6d344208947d49b65e10 379 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 71 80 - T 11-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 VSVS12_00425 bbbb3eda138e6d344208947d49b65e10 379 Gene3D G3DSA:3.30.70.360 177 292 3.8E-80 T 11-10-2018 VSVS12_00425 bbbb3eda138e6d344208947d49b65e10 379 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 8 372 4.2E-124 T 11-10-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 VSVS12_01262 a5c173fa27cd48d270e3b0d53e029a73 468 Gene3D G3DSA:2.30.40.20 26 68 6.1E-8 T 11-10-2018 VSVS12_01262 a5c173fa27cd48d270e3b0d53e029a73 468 Gene3D G3DSA:1.10.150.20 167 207 6.1E-8 T 11-10-2018 VSVS12_01262 a5c173fa27cd48d270e3b0d53e029a73 468 Gene3D G3DSA:3.30.70.270 24 166 6.1E-8 T 11-10-2018 VSVS12_01262 a5c173fa27cd48d270e3b0d53e029a73 468 SUPERFAMILY SSF56672 13 225 1.11E-28 T 11-10-2018 VSVS12_01262 a5c173fa27cd48d270e3b0d53e029a73 468 Pfam PF00817 impB/mucB/samB family 23 140 2.0E-6 T 11-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 VSVS12_03907 6ea19029747943edc1c72f91193c715e 899 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 153 290 2.1E-51 T 11-10-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain VSVS12_03907 6ea19029747943edc1c72f91193c715e 899 Gene3D G3DSA:3.40.50.261 136 293 9.3E-52 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VSVS12_03907 6ea19029747943edc1c72f91193c715e 899 SUPERFAMILY SSF52210 133 291 7.59E-38 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VSVS12_03907 6ea19029747943edc1c72f91193c715e 899 SUPERFAMILY SSF55729 740 882 1.19E-19 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_03907 6ea19029747943edc1c72f91193c715e 899 SUPERFAMILY SSF56059 493 700 3.93E-28 T 11-10-2018 VSVS12_03907 6ea19029747943edc1c72f91193c715e 899 Gene3D G3DSA:3.40.630.30 729 899 4.0E-37 T 11-10-2018 VSVS12_03907 6ea19029747943edc1c72f91193c715e 899 Gene3D G3DSA:3.40.50.720 2 135 1.0E-30 T 11-10-2018 VSVS12_03907 6ea19029747943edc1c72f91193c715e 899 SUPERFAMILY SSF51735 3 141 7.31E-30 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_03907 6ea19029747943edc1c72f91193c715e 899 Pfam PF13302 Acetyltransferase (GNAT) domain 738 876 1.1E-7 T 11-10-2018 IPR000182 GNAT domain VSVS12_03907 6ea19029747943edc1c72f91193c715e 899 Gene3D G3DSA:3.30.470.20 493 702 1.0E-55 T 11-10-2018 VSVS12_03907 6ea19029747943edc1c72f91193c715e 899 Gene3D G3DSA:3.30.1490.20 511 588 1.0E-55 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VSVS12_03907 6ea19029747943edc1c72f91193c715e 899 Pfam PF13549 ATP-grasp domain 486 706 4.6E-67 T 11-10-2018 VSVS12_03907 6ea19029747943edc1c72f91193c715e 899 SMART SM00881 7 102 7.6E-23 T 11-10-2018 IPR003781 CoA-binding GO:0048037 VSVS12_03907 6ea19029747943edc1c72f91193c715e 899 Pfam PF13380 CoA binding domain 11 137 4.7E-20 T 11-10-2018 IPR003781 CoA-binding GO:0048037 VSVS12_03907 6ea19029747943edc1c72f91193c715e 899 SUPERFAMILY SSF52210 297 457 7.33E-39 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VSVS12_03907 6ea19029747943edc1c72f91193c715e 899 Gene3D G3DSA:3.40.50.261 295 465 2.9E-47 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VSVS12_01643 b2ae4cc0441e0be35fe3258d9431c98b 397 SUPERFAMILY SSF53335 78 393 9.0E-71 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_01643 b2ae4cc0441e0be35fe3258d9431c98b 397 SMART SM00359 3 87 2.5E-9 T 11-10-2018 IPR002478 PUA domain GO:0003723 VSVS12_01643 b2ae4cc0441e0be35fe3258d9431c98b 397 SUPERFAMILY SSF88697 3 71 3.6E-15 T 11-10-2018 IPR015947 PUA-like superfamily VSVS12_01643 b2ae4cc0441e0be35fe3258d9431c98b 397 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 111 376 2.4E-30 T 11-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 VSVS12_01643 b2ae4cc0441e0be35fe3258d9431c98b 397 Gene3D G3DSA:2.30.130.10 2 71 5.4E-27 T 11-10-2018 IPR036974 PUA domain superfamily GO:0003723 VSVS12_01643 b2ae4cc0441e0be35fe3258d9431c98b 397 Gene3D G3DSA:3.40.50.150 181 396 4.3E-70 T 11-10-2018 VSVS12_01643 b2ae4cc0441e0be35fe3258d9431c98b 397 Gene3D G3DSA:3.30.750.80 72 180 1.5E-36 T 11-10-2018 VSVS12_01643 b2ae4cc0441e0be35fe3258d9431c98b 397 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 397 68.05 T 11-10-2018 IPR023542 rRNA large subunit methyltransferase I GO:0008649 VSVS12_00186 1457de3eb7df0cf01bb132c8527d1666 467 SUPERFAMILY SSF47917 352 466 3.14E-50 T 11-10-2018 VSVS12_00186 1457de3eb7df0cf01bb132c8527d1666 467 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 340 349 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VSVS12_00186 1457de3eb7df0cf01bb132c8527d1666 467 SUPERFAMILY SSF52540 77 355 1.74E-85 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00186 1457de3eb7df0cf01bb132c8527d1666 467 SUPERFAMILY SSF50615 1 75 2.49E-25 T 11-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VSVS12_00186 1457de3eb7df0cf01bb132c8527d1666 467 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 73 2.1E-20 T 11-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VSVS12_00186 1457de3eb7df0cf01bb132c8527d1666 467 Gene3D G3DSA:1.10.1140.10 352 467 2.5E-53 T 11-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VSVS12_00186 1457de3eb7df0cf01bb132c8527d1666 467 Gene3D G3DSA:2.40.10.170 2 75 9.6E-30 T 11-10-2018 VSVS12_00186 1457de3eb7df0cf01bb132c8527d1666 467 Gene3D G3DSA:3.40.50.300 76 351 1.0E-110 T 11-10-2018 VSVS12_00186 1457de3eb7df0cf01bb132c8527d1666 467 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 349 1.1E-60 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VSVS12_00186 1457de3eb7df0cf01bb132c8527d1666 467 SMART SM00382 142 334 2.4E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_00186 1457de3eb7df0cf01bb132c8527d1666 467 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 467 1.2E-248 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 VSVS12_00186 1457de3eb7df0cf01bb132c8527d1666 467 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 467 55.909 T 11-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 VSVS12_01019 51f597013109fc23075ad16f4df05b8b 189 Pfam PF03358 NADPH-dependent FMN reductase 41 135 7.2E-10 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 VSVS12_01019 51f597013109fc23075ad16f4df05b8b 189 ProSitePatterns PS00201 Flavodoxin signature. 7 23 - T 11-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 VSVS12_01019 51f597013109fc23075ad16f4df05b8b 189 SUPERFAMILY SSF52218 4 186 5.77E-54 T 11-10-2018 IPR029039 Flavoprotein-like superfamily VSVS12_01019 51f597013109fc23075ad16f4df05b8b 189 Gene3D G3DSA:3.40.50.360 2 189 5.2E-58 T 11-10-2018 IPR029039 Flavoprotein-like superfamily VSVS12_01755 26d8c9f917bea7fdaf225f723306183a 316 SUPERFAMILY SSF46785 6 88 4.68E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_01755 26d8c9f917bea7fdaf225f723306183a 316 SUPERFAMILY SSF53850 89 297 5.61E-35 T 11-10-2018 VSVS12_01755 26d8c9f917bea7fdaf225f723306183a 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 1.8E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_01755 26d8c9f917bea7fdaf225f723306183a 316 Gene3D G3DSA:1.10.10.10 4 92 8.9E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_01755 26d8c9f917bea7fdaf225f723306183a 316 Gene3D G3DSA:3.40.190.10 163 266 8.8E-50 T 11-10-2018 VSVS12_01755 26d8c9f917bea7fdaf225f723306183a 316 Pfam PF03466 LysR substrate binding domain 88 291 1.4E-33 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_01755 26d8c9f917bea7fdaf225f723306183a 316 Gene3D G3DSA:3.40.190.10 93 290 8.8E-50 T 11-10-2018 VSVS12_00292 d47c5ca20ce89aa59eed5dbb917b702d 148 TIGRFAM TIGR01710 typeII_sec_gspG: type II secretion system protein G 10 143 3.1E-55 T 11-10-2018 IPR010054 General secretion pathway protein G GO:0008565|GO:0015627|GO:0015628 VSVS12_00292 d47c5ca20ce89aa59eed5dbb917b702d 148 Gene3D G3DSA:3.30.700.10 34 142 8.9E-42 T 11-10-2018 VSVS12_00292 d47c5ca20ce89aa59eed5dbb917b702d 148 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 31 6.3E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_00292 d47c5ca20ce89aa59eed5dbb917b702d 148 PRINTS PR00813 Bacterial general secretion pathway protein G signature 11 36 6.6E-18 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 VSVS12_00292 d47c5ca20ce89aa59eed5dbb917b702d 148 PRINTS PR00813 Bacterial general secretion pathway protein G signature 47 65 6.6E-18 T 11-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 VSVS12_00292 d47c5ca20ce89aa59eed5dbb917b702d 148 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 31 1.6E-10 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_00292 d47c5ca20ce89aa59eed5dbb917b702d 148 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_00292 d47c5ca20ce89aa59eed5dbb917b702d 148 SUPERFAMILY SSF54523 38 143 1.67E-35 T 11-10-2018 VSVS12_00292 d47c5ca20ce89aa59eed5dbb917b702d 148 Pfam PF08334 Type II secretion system (T2SS), protein G 34 142 6.1E-41 T 11-10-2018 IPR013545 Type II secretion system protein G VSVS12_00333 38d71d350475c72ad2d94948b5b91950 268 Gene3D G3DSA:3.20.190.10 2 127 2.3E-41 T 11-10-2018 IPR035937 MutM-like, N-terminal VSVS12_00333 38d71d350475c72ad2d94948b5b91950 268 SUPERFAMILY SSF57716 216 267 2.34E-16 T 11-10-2018 VSVS12_00333 38d71d350475c72ad2d94948b5b91950 268 Pfam PF06827 Zinc finger found in FPG and IleRS 240 267 1.2E-8 T 11-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 VSVS12_00333 38d71d350475c72ad2d94948b5b91950 268 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 268 42.551 T 11-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 VSVS12_00333 38d71d350475c72ad2d94948b5b91950 268 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 267 7.1E-94 T 11-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 VSVS12_00333 38d71d350475c72ad2d94948b5b91950 268 ProSitePatterns PS01242 Zinc finger FPG-type signature. 243 267 - T 11-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 VSVS12_00333 38d71d350475c72ad2d94948b5b91950 268 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 2 114 1.1E-30 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 VSVS12_00333 38d71d350475c72ad2d94948b5b91950 268 SUPERFAMILY SSF46946 129 220 1.57E-29 T 11-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 VSVS12_00333 38d71d350475c72ad2d94948b5b91950 268 Gene3D G3DSA:1.10.8.50 130 268 2.1E-46 T 11-10-2018 VSVS12_00333 38d71d350475c72ad2d94948b5b91950 268 SMART SM00898 2 115 3.0E-52 T 11-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 VSVS12_00333 38d71d350475c72ad2d94948b5b91950 268 SMART SM01232 128 220 5.1E-44 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 VSVS12_00333 38d71d350475c72ad2d94948b5b91950 268 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 128 217 3.2E-26 T 11-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 VSVS12_00333 38d71d350475c72ad2d94948b5b91950 268 SUPERFAMILY SSF81624 2 137 1.83E-41 T 11-10-2018 IPR035937 MutM-like, N-terminal VSVS12_00194 3e8eb1f89239e96379e2eafabf66949f 293 Gene3D G3DSA:3.90.1530.30 53 116 6.6E-27 T 11-10-2018 VSVS12_00194 3e8eb1f89239e96379e2eafabf66949f 293 SUPERFAMILY SSF110849 39 174 4.6E-34 T 11-10-2018 IPR036086 ParB/Sulfiredoxin superfamily VSVS12_00194 3e8eb1f89239e96379e2eafabf66949f 293 Gene3D G3DSA:1.10.10.2830 117 230 2.2E-33 T 11-10-2018 VSVS12_00194 3e8eb1f89239e96379e2eafabf66949f 293 Pfam PF02195 ParB-like nuclease domain 40 130 2.1E-29 T 11-10-2018 IPR003115 ParB/Sulfiredoxin VSVS12_00194 3e8eb1f89239e96379e2eafabf66949f 293 SMART SM00470 40 130 2.0E-33 T 11-10-2018 IPR003115 ParB/Sulfiredoxin VSVS12_00194 3e8eb1f89239e96379e2eafabf66949f 293 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 37 212 5.8E-56 T 11-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 VSVS12_03885 d1f6e7f744585923e77875ca91ab12b3 111 SUPERFAMILY SSF47413 1 68 8.45E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VSVS12_03885 d1f6e7f744585923e77875ca91ab12b3 111 Gene3D G3DSA:1.10.260.40 3 108 1.4E-17 T 11-10-2018 VSVS12_03885 d1f6e7f744585923e77875ca91ab12b3 111 SMART SM00530 6 62 7.1E-13 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VSVS12_03885 d1f6e7f744585923e77875ca91ab12b3 111 Pfam PF01381 Helix-turn-helix 7 62 8.0E-14 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VSVS12_03893 d1f6e7f744585923e77875ca91ab12b3 111 SUPERFAMILY SSF47413 1 68 8.45E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VSVS12_03893 d1f6e7f744585923e77875ca91ab12b3 111 Gene3D G3DSA:1.10.260.40 3 108 1.4E-17 T 11-10-2018 VSVS12_03893 d1f6e7f744585923e77875ca91ab12b3 111 SMART SM00530 6 62 7.1E-13 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VSVS12_03893 d1f6e7f744585923e77875ca91ab12b3 111 Pfam PF01381 Helix-turn-helix 7 62 8.0E-14 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VSVS12_01764 9af61ef6896ed522cc2a85545f8262c9 281 Gene3D G3DSA:1.10.10.10 1 76 8.0E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_01764 9af61ef6896ed522cc2a85545f8262c9 281 SUPERFAMILY SSF46689 1 78 9.5E-18 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_01764 9af61ef6896ed522cc2a85545f8262c9 281 Pfam PF01380 SIS domain 129 257 1.9E-17 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VSVS12_01764 9af61ef6896ed522cc2a85545f8262c9 281 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 1.3E-21 T 11-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 VSVS12_01764 9af61ef6896ed522cc2a85545f8262c9 281 Gene3D G3DSA:3.40.50.10490 97 280 2.3E-40 T 11-10-2018 VSVS12_01764 9af61ef6896ed522cc2a85545f8262c9 281 SUPERFAMILY SSF53697 94 276 6.81E-39 T 11-10-2018 VSVS12_02178 35fa06859f9b681107006b3cc8cc476d 326 SUPERFAMILY SSF56059 48 285 1.01E-18 T 11-10-2018 VSVS12_02178 35fa06859f9b681107006b3cc8cc476d 326 Pfam PF14397 Sugar-transfer associated ATP-grasp 26 300 3.2E-112 T 11-10-2018 IPR039523 Alpha-L-glutamate ligase-related protein, ATP-grasp domain KEGG: 00270+6.3.2.2+6.3.2.3|KEGG: 00480+6.3.2.2+6.3.2.3|MetaCyc: PWY-6840|MetaCyc: PWY-7255 VSVS12_02178 35fa06859f9b681107006b3cc8cc476d 326 TIGRFAM TIGR02291 rimK_rel_E_lig: alpha-L-glutamate ligase homolog 10 322 4.0E-168 T 11-10-2018 IPR011758 Alpha-L-glutamate ligase-related protein VSVS12_03633 d297830b379224e1d89bb194e0bce87b 457 SUPERFAMILY SSF51905 1 441 5.74E-19 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_03633 d297830b379224e1d89bb194e0bce87b 457 TIGRFAM TIGR03378 glycerol3P_GlpB: glycerol-3-phosphate dehydrogenase, anaerobic, B subunit 3 435 2.3E-179 T 11-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 VSVS12_03633 d297830b379224e1d89bb194e0bce87b 457 PIRSF PIRSF000141 1 441 4.4E-174 T 11-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 VSVS12_03633 d297830b379224e1d89bb194e0bce87b 457 Hamap MF_00753 Anaerobic glycerol-3-phosphate dehydrogenase subunit B [glpB]. 1 438 42.11 T 11-10-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 VSVS12_03633 d297830b379224e1d89bb194e0bce87b 457 Pfam PF00890 FAD binding domain 4 422 4.4E-54 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 VSVS12_03633 d297830b379224e1d89bb194e0bce87b 457 Gene3D G3DSA:3.50.50.60 1 100 3.8E-9 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_00200 07bd215236da93168f116da6b0255f80 539 Pfam PF02096 60Kd inner membrane protein 350 529 3.9E-63 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VSVS12_00200 07bd215236da93168f116da6b0255f80 539 Gene3D G3DSA:2.70.98.90 60 329 1.9E-87 T 11-10-2018 IPR038221 YidC, periplasmic domain superfamily VSVS12_00200 07bd215236da93168f116da6b0255f80 539 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 349 528 2.3E-73 T 11-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00200 07bd215236da93168f116da6b0255f80 539 PRINTS PR00701 60kDa inner membrane protein signature 495 518 1.5E-98 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VSVS12_00200 07bd215236da93168f116da6b0255f80 539 PRINTS PR00701 60kDa inner membrane protein signature 248 263 1.5E-98 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VSVS12_00200 07bd215236da93168f116da6b0255f80 539 PRINTS PR00701 60kDa inner membrane protein signature 411 434 1.5E-98 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VSVS12_00200 07bd215236da93168f116da6b0255f80 539 PRINTS PR00701 60kDa inner membrane protein signature 160 180 1.5E-98 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VSVS12_00200 07bd215236da93168f116da6b0255f80 539 PRINTS PR00701 60kDa inner membrane protein signature 213 231 1.5E-98 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VSVS12_00200 07bd215236da93168f116da6b0255f80 539 PRINTS PR00701 60kDa inner membrane protein signature 320 340 1.5E-98 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VSVS12_00200 07bd215236da93168f116da6b0255f80 539 PRINTS PR00701 60kDa inner membrane protein signature 458 480 1.5E-98 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VSVS12_00200 07bd215236da93168f116da6b0255f80 539 PRINTS PR00701 60kDa inner membrane protein signature 70 91 1.5E-98 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VSVS12_00200 07bd215236da93168f116da6b0255f80 539 PRINTS PR00701 60kDa inner membrane protein signature 2 23 1.5E-98 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VSVS12_00200 07bd215236da93168f116da6b0255f80 539 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 348 7.6E-109 T 11-10-2018 IPR028053 Membrane insertase YidC, N-terminal VSVS12_00200 07bd215236da93168f116da6b0255f80 539 Pfam PF14849 YidC periplasmic domain 65 338 5.3E-82 T 11-10-2018 IPR038210 Membrane insertase YidC, periplasmic domain VSVS12_00200 07bd215236da93168f116da6b0255f80 539 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 531 25.807 T 11-10-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0032977 VSVS12_00200 07bd215236da93168f116da6b0255f80 539 PRINTS PR01900 YidC translocation/secretion protein signature 335 351 5.5E-27 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VSVS12_00200 07bd215236da93168f116da6b0255f80 539 PRINTS PR01900 YidC translocation/secretion protein signature 464 479 5.5E-27 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VSVS12_00200 07bd215236da93168f116da6b0255f80 539 PRINTS PR01900 YidC translocation/secretion protein signature 484 508 5.5E-27 T 11-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 VSVS12_00694 da37999afc49adb236852d3311a71c9a 411 TIGRFAM TIGR03644 marine_trans_1: probable ammonium transporter, marine subtype 14 407 2.6E-205 T 11-10-2018 IPR019879 Ammonium transporter, marine subtype VSVS12_00694 da37999afc49adb236852d3311a71c9a 411 ProSitePatterns PS01219 Ammonium transporters signature. 165 190 - T 11-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 VSVS12_00694 da37999afc49adb236852d3311a71c9a 411 Pfam PF00909 Ammonium Transporter Family 20 404 3.1E-99 T 11-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 VSVS12_00694 da37999afc49adb236852d3311a71c9a 411 SUPERFAMILY SSF111352 14 385 6.67E-106 T 11-10-2018 VSVS12_00694 da37999afc49adb236852d3311a71c9a 411 Gene3D G3DSA:1.10.3430.10 2 409 9.1E-120 T 11-10-2018 IPR029020 Ammonium/urea transporter VSVS12_02392 77ed7b1a8936d4647b81897b81252c54 381 SMART SM00363 7 69 3.4E-9 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_02392 77ed7b1a8936d4647b81897b81252c54 381 SUPERFAMILY SSF55120 66 227 6.96E-38 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VSVS12_02392 77ed7b1a8936d4647b81897b81252c54 381 Gene3D G3DSA:3.30.70.1560 132 205 6.2E-53 T 11-10-2018 VSVS12_02392 77ed7b1a8936d4647b81897b81252c54 381 Gene3D G3DSA:3.10.290.10 5 68 5.8E-22 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VSVS12_02392 77ed7b1a8936d4647b81897b81252c54 381 Pfam PF00849 RNA pseudouridylate synthase 67 193 9.4E-13 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VSVS12_02392 77ed7b1a8936d4647b81897b81252c54 381 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 102 116 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VSVS12_02392 77ed7b1a8936d4647b81897b81252c54 381 Gene3D G3DSA:3.30.70.580 69 227 6.2E-53 T 11-10-2018 VSVS12_02392 77ed7b1a8936d4647b81897b81252c54 381 Pfam PF01479 S4 domain 8 41 9.7E-10 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_02392 77ed7b1a8936d4647b81897b81252c54 381 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 71 223 3.5E-46 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VSVS12_02392 77ed7b1a8936d4647b81897b81252c54 381 SUPERFAMILY SSF55174 8 61 4.37E-14 T 11-10-2018 VSVS12_01385 994717cbae2964790bb2be3e3887710d 351 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 247 340 3.3E-8 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_01385 994717cbae2964790bb2be3e3887710d 351 SUPERFAMILY SSF55874 206 338 4.71E-20 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_01385 994717cbae2964790bb2be3e3887710d 351 SMART SM00387 243 341 3.0E-10 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_01385 994717cbae2964790bb2be3e3887710d 351 Pfam PF06580 Histidine kinase 150 228 8.9E-22 T 11-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 VSVS12_01385 994717cbae2964790bb2be3e3887710d 351 Gene3D G3DSA:3.30.565.10 205 349 2.3E-22 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_02245 15c5200ef66d550a9e29c276a20076c5 206 Pfam PF00005 ABC transporter 18 159 1.1E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_02245 15c5200ef66d550a9e29c276a20076c5 206 SMART SM00382 26 205 4.3E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_02245 15c5200ef66d550a9e29c276a20076c5 206 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_02245 15c5200ef66d550a9e29c276a20076c5 206 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 204 7.5E-77 T 11-10-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004 VSVS12_02245 15c5200ef66d550a9e29c276a20076c5 206 Gene3D G3DSA:3.40.50.300 1 197 1.4E-42 T 11-10-2018 VSVS12_02245 15c5200ef66d550a9e29c276a20076c5 206 SUPERFAMILY SSF52540 2 195 4.26E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02150 4ccf46714b589054ed6017b4b62b30e4 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 255 332 8.0E-39 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 VSVS12_02150 4ccf46714b589054ed6017b4b62b30e4 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 183.817 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 VSVS12_02150 4ccf46714b589054ed6017b4b62b30e4 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 16 240 1.3E-116 T 11-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 VSVS12_02150 4ccf46714b589054ed6017b4b62b30e4 334 Gene3D G3DSA:1.10.8.60 187 260 5.2E-31 T 11-10-2018 VSVS12_02150 4ccf46714b589054ed6017b4b62b30e4 334 SUPERFAMILY SSF52540 25 256 3.87E-55 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02150 4ccf46714b589054ed6017b4b62b30e4 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 258 331 1.6E-33 T 11-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 VSVS12_02150 4ccf46714b589054ed6017b4b62b30e4 334 SUPERFAMILY SSF46785 262 332 2.18E-25 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_02150 4ccf46714b589054ed6017b4b62b30e4 334 Gene3D G3DSA:3.40.50.300 25 186 5.4E-42 T 11-10-2018 VSVS12_02150 4ccf46714b589054ed6017b4b62b30e4 334 SMART SM00382 56 183 1.0E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_02150 4ccf46714b589054ed6017b4b62b30e4 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 28 331 2.4E-147 T 11-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 VSVS12_02150 4ccf46714b589054ed6017b4b62b30e4 334 Gene3D G3DSA:1.10.10.10 262 334 4.9E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_04264 f26407a689a12c6d978c7643c0724d33 206 Pfam PF02525 Flavodoxin-like fold 5 173 6.1E-44 T 11-10-2018 IPR003680 Flavodoxin-like fold VSVS12_04264 f26407a689a12c6d978c7643c0724d33 206 SUPERFAMILY SSF52218 5 181 2.29E-49 T 11-10-2018 IPR029039 Flavoprotein-like superfamily VSVS12_04264 f26407a689a12c6d978c7643c0724d33 206 Gene3D G3DSA:3.40.50.360 3 179 5.1E-51 T 11-10-2018 IPR029039 Flavoprotein-like superfamily VSVS12_00669 414a7d75c04d8b0708dab6e7b43a6d72 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 1.7E-67 T 11-10-2018 VSVS12_00669 414a7d75c04d8b0708dab6e7b43a6d72 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 1.7E-67 T 11-10-2018 VSVS12_00669 414a7d75c04d8b0708dab6e7b43a6d72 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 1.7E-67 T 11-10-2018 VSVS12_00669 414a7d75c04d8b0708dab6e7b43a6d72 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 1.7E-67 T 11-10-2018 VSVS12_00669 414a7d75c04d8b0708dab6e7b43a6d72 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 1.7E-67 T 11-10-2018 VSVS12_00669 414a7d75c04d8b0708dab6e7b43a6d72 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 1.7E-67 T 11-10-2018 VSVS12_00669 414a7d75c04d8b0708dab6e7b43a6d72 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.7E-67 T 11-10-2018 VSVS12_00669 414a7d75c04d8b0708dab6e7b43a6d72 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 1.7E-67 T 11-10-2018 VSVS12_00669 414a7d75c04d8b0708dab6e7b43a6d72 476 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 1.7E-67 T 11-10-2018 VSVS12_00669 414a7d75c04d8b0708dab6e7b43a6d72 476 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 11-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 VSVS12_00669 414a7d75c04d8b0708dab6e7b43a6d72 476 Gene3D G3DSA:3.50.50.60 150 271 1.0E-121 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_00669 414a7d75c04d8b0708dab6e7b43a6d72 476 Gene3D G3DSA:3.50.50.60 9 332 1.0E-121 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_00669 414a7d75c04d8b0708dab6e7b43a6d72 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 6.3E-40 T 11-10-2018 VSVS12_00669 414a7d75c04d8b0708dab6e7b43a6d72 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 6.3E-40 T 11-10-2018 VSVS12_00669 414a7d75c04d8b0708dab6e7b43a6d72 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 6.3E-40 T 11-10-2018 VSVS12_00669 414a7d75c04d8b0708dab6e7b43a6d72 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 6.3E-40 T 11-10-2018 VSVS12_00669 414a7d75c04d8b0708dab6e7b43a6d72 476 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 6.3E-40 T 11-10-2018 VSVS12_00669 414a7d75c04d8b0708dab6e7b43a6d72 476 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 2.0E-35 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VSVS12_00669 414a7d75c04d8b0708dab6e7b43a6d72 476 SUPERFAMILY SSF55424 343 466 1.36E-38 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VSVS12_00669 414a7d75c04d8b0708dab6e7b43a6d72 476 SUPERFAMILY SSF51905 3 337 3.73E-55 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_00669 414a7d75c04d8b0708dab6e7b43a6d72 476 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 5.3E-63 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VSVS12_00669 414a7d75c04d8b0708dab6e7b43a6d72 476 Gene3D G3DSA:3.30.390.30 346 467 7.8E-45 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VSVS12_00669 414a7d75c04d8b0708dab6e7b43a6d72 476 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 8 460 8.2E-150 T 11-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 VSVS12_00669 414a7d75c04d8b0708dab6e7b43a6d72 476 PIRSF PIRSF000350 1 468 2.5E-82 T 11-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 VSVS12_03020 dd0771d5a542b85e88cff93c9732e6bd 245 Pfam PF07238 PilZ domain 134 235 4.4E-14 T 11-10-2018 IPR009875 PilZ domain GO:0035438 VSVS12_03020 dd0771d5a542b85e88cff93c9732e6bd 245 Pfam PF12945 Flagellar protein YcgR 37 126 1.6E-12 T 11-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal VSVS12_03020 dd0771d5a542b85e88cff93c9732e6bd 245 SUPERFAMILY SSF141371 137 243 9.81E-26 T 11-10-2018 VSVS12_03020 dd0771d5a542b85e88cff93c9732e6bd 245 SUPERFAMILY SSF141371 26 135 2.82E-28 T 11-10-2018 VSVS12_03020 dd0771d5a542b85e88cff93c9732e6bd 245 Gene3D G3DSA:2.30.110.10 22 135 3.8E-42 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VSVS12_03020 dd0771d5a542b85e88cff93c9732e6bd 245 Gene3D G3DSA:2.40.10.220 136 245 4.4E-37 T 11-10-2018 VSVS12_02281 edb9731eb8a708c83bf21940bbb690a9 178 Pfam PF03358 NADPH-dependent FMN reductase 1 143 9.7E-29 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 VSVS12_02281 edb9731eb8a708c83bf21940bbb690a9 178 Gene3D G3DSA:3.40.50.360 1 178 4.8E-35 T 11-10-2018 IPR029039 Flavoprotein-like superfamily VSVS12_02281 edb9731eb8a708c83bf21940bbb690a9 178 SUPERFAMILY SSF52218 1 177 4.99E-36 T 11-10-2018 IPR029039 Flavoprotein-like superfamily VSVS12_03860 ea0d5f00ab7447ac7d1f98dae50b49d5 326 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 11-10-2018 VSVS12_03860 ea0d5f00ab7447ac7d1f98dae50b49d5 326 SUPERFAMILY SSF47413 1 58 1.78E-15 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VSVS12_03860 ea0d5f00ab7447ac7d1f98dae50b49d5 326 Gene3D G3DSA:1.10.260.40 1 61 2.8E-26 T 11-10-2018 VSVS12_03860 ea0d5f00ab7447ac7d1f98dae50b49d5 326 Pfam PF13407 Periplasmic binding protein domain 64 255 2.2E-12 T 11-10-2018 IPR025997 Periplasmic binding protein VSVS12_03860 ea0d5f00ab7447ac7d1f98dae50b49d5 326 SMART SM00354 1 73 6.0E-28 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VSVS12_03860 ea0d5f00ab7447ac7d1f98dae50b49d5 326 SUPERFAMILY SSF53822 61 310 7.66E-34 T 11-10-2018 IPR028082 Periplasmic binding protein-like I VSVS12_03860 ea0d5f00ab7447ac7d1f98dae50b49d5 326 Gene3D G3DSA:3.40.50.2300 155 326 3.4E-21 T 11-10-2018 VSVS12_03860 ea0d5f00ab7447ac7d1f98dae50b49d5 326 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 325 8.8E-135 T 11-10-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 VSVS12_03860 ea0d5f00ab7447ac7d1f98dae50b49d5 326 Gene3D G3DSA:3.40.50.2300 62 154 1.6E-21 T 11-10-2018 VSVS12_03860 ea0d5f00ab7447ac7d1f98dae50b49d5 326 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 50 4.5E-18 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VSVS12_04498 556ba3e78f3fdf4349e120e7712eb961 131 PIRSF PIRSF007010 1 129 3.6E-44 T 11-10-2018 IPR016502 Type II secretion system (T2SS) pilotin, S protein VSVS12_04498 556ba3e78f3fdf4349e120e7712eb961 131 Gene3D G3DSA:3.30.300.250 18 128 3.2E-42 T 11-10-2018 VSVS12_04498 556ba3e78f3fdf4349e120e7712eb961 131 Pfam PF16549 Type II secretion system (T2SS) pilotin, S protein 15 127 7.2E-42 T 11-10-2018 IPR016502 Type II secretion system (T2SS) pilotin, S protein VSVS12_00030 b70e0f9e6ae8bd9c93e3eda6d3be15f0 205 Pfam PF01810 LysE type translocator 15 202 9.0E-37 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VSVS12_00030 b70e0f9e6ae8bd9c93e3eda6d3be15f0 205 PIRSF PIRSF006324 1 205 2.0E-57 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VSVS12_03644 d2fe282af104108fdc810ef6777a3952 128 Pfam PF11140 Protein of unknown function (DUF2913) 4 114 4.6E-5 T 11-10-2018 IPR021316 Protein of unknown function DUF2913 VSVS12_03622 4da5c7d342346cb08765cc8d3c87d2ad 386 Gene3D G3DSA:1.20.1250.20 202 383 2.7E-11 T 11-10-2018 VSVS12_03622 4da5c7d342346cb08765cc8d3c87d2ad 386 Gene3D G3DSA:1.20.1250.20 13 189 4.1E-17 T 11-10-2018 VSVS12_03622 4da5c7d342346cb08765cc8d3c87d2ad 386 Pfam PF07690 Major Facilitator Superfamily 18 343 8.4E-27 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VSVS12_03622 4da5c7d342346cb08765cc8d3c87d2ad 386 SUPERFAMILY SSF103473 17 381 5.23E-37 T 11-10-2018 IPR036259 MFS transporter superfamily VSVS12_00366 04b30a5140bbe7e2a17d7968f55e1d13 296 SUPERFAMILY SSF51730 22 294 3.14E-95 T 11-10-2018 IPR029041 FAD-linked oxidoreductase-like VSVS12_00366 04b30a5140bbe7e2a17d7968f55e1d13 296 Gene3D G3DSA:3.20.20.220 1 296 2.0E-111 T 11-10-2018 VSVS12_00366 04b30a5140bbe7e2a17d7968f55e1d13 296 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 25 290 1.5E-101 T 11-10-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 VSVS12_00366 04b30a5140bbe7e2a17d7968f55e1d13 296 Pfam PF02219 Methylenetetrahydrofolate reductase 18 291 6.6E-99 T 11-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 VSVS12_02078 5be4aacbfa3bd96e599edccf1379edfe 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 141 160 2.1E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_02078 5be4aacbfa3bd96e599edccf1379edfe 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 2.1E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_02078 5be4aacbfa3bd96e599edccf1379edfe 241 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 179 2.1E-12 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_02078 5be4aacbfa3bd96e599edccf1379edfe 241 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 128 156 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VSVS12_02078 5be4aacbfa3bd96e599edccf1379edfe 241 SUPERFAMILY SSF51735 2 236 5.52E-48 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_02078 5be4aacbfa3bd96e599edccf1379edfe 241 Gene3D G3DSA:3.40.50.720 1 237 1.1E-46 T 11-10-2018 VSVS12_02078 5be4aacbfa3bd96e599edccf1379edfe 241 Pfam PF00106 short chain dehydrogenase 2 182 3.0E-35 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01548 ca4e18866a5644317d5519f35931b9ea 417 Gene3D G3DSA:1.20.1090.10 187 382 2.4E-42 T 11-10-2018 VSVS12_01548 ca4e18866a5644317d5519f35931b9ea 417 SUPERFAMILY SSF56796 1 380 1.31E-89 T 11-10-2018 VSVS12_01548 ca4e18866a5644317d5519f35931b9ea 417 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 372 1.0E-90 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VSVS12_01548 ca4e18866a5644317d5519f35931b9ea 417 Gene3D G3DSA:3.40.50.1970 1 180 4.8E-48 T 11-10-2018 VSVS12_04424 b5ec662973181b5176da3ea4392e84f5 221 TIGRFAM TIGR03759 conj_TIGR03759: integrating conjugative element protein, PFL_4693 family 30 213 5.2E-43 T 11-10-2018 IPR022293 Integrating conjugative element protein, PFL4693 VSVS12_02968 1f63f208b077fb398d3491c1712ad09a 601 Gene3D G3DSA:3.40.30.10 473 600 9.5E-35 T 11-10-2018 VSVS12_02968 1f63f208b077fb398d3491c1712ad09a 601 Pfam PF13899 Thioredoxin-like 490 570 6.6E-14 T 11-10-2018 VSVS12_02968 1f63f208b077fb398d3491c1712ad09a 601 ProSitePatterns PS00194 Thioredoxin family active site. 508 526 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VSVS12_02968 1f63f208b077fb398d3491c1712ad09a 601 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 209 409 7.4E-18 T 11-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 VSVS12_02968 1f63f208b077fb398d3491c1712ad09a 601 Pfam PF11412 Disulphide bond corrector protein DsbC 36 147 6.3E-30 T 11-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain VSVS12_02968 1f63f208b077fb398d3491c1712ad09a 601 Gene3D G3DSA:2.60.40.1250 29 163 1.7E-40 T 11-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily VSVS12_02968 1f63f208b077fb398d3491c1712ad09a 601 SUPERFAMILY SSF74863 35 147 1.57E-39 T 11-10-2018 IPR036929 Thiol:disulfide interchange protein DsbD, N-terminal domain superfamily VSVS12_02968 1f63f208b077fb398d3491c1712ad09a 601 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 600 38.161 T 11-10-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 VSVS12_02968 1f63f208b077fb398d3491c1712ad09a 601 SUPERFAMILY SSF52833 483 597 4.11E-24 T 11-10-2018 IPR036249 Thioredoxin-like superfamily VSVS12_02185 4e3b5876187400866aa05adaa83f416b 236 SMART SM00862 157 233 5.7E-19 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VSVS12_02185 4e3b5876187400866aa05adaa83f416b 236 SUPERFAMILY SSF52172 2 125 4.41E-37 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_02185 4e3b5876187400866aa05adaa83f416b 236 Gene3D G3DSA:3.40.50.2300 1 134 4.2E-34 T 11-10-2018 VSVS12_02185 4e3b5876187400866aa05adaa83f416b 236 Gene3D G3DSA:1.10.10.10 135 236 4.8E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_02185 4e3b5876187400866aa05adaa83f416b 236 Pfam PF00072 Response regulator receiver domain 5 113 3.9E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_02185 4e3b5876187400866aa05adaa83f416b 236 SUPERFAMILY SSF46894 133 234 1.76E-26 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VSVS12_02185 4e3b5876187400866aa05adaa83f416b 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 233 2.9E-20 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VSVS12_02185 4e3b5876187400866aa05adaa83f416b 236 SMART SM00448 3 113 2.7E-37 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_03843 866a0d44209b6b2d91defda18fd9a66f 365 Gene3D G3DSA:3.40.50.2300 33 363 1.7E-142 T 11-10-2018 VSVS12_03843 866a0d44209b6b2d91defda18fd9a66f 365 SUPERFAMILY SSF53822 27 364 4.98E-79 T 11-10-2018 IPR028082 Periplasmic binding protein-like I VSVS12_03843 866a0d44209b6b2d91defda18fd9a66f 365 Pfam PF13407 Periplasmic binding protein domain 69 324 3.8E-15 T 11-10-2018 IPR025997 Periplasmic binding protein VSVS12_03843 866a0d44209b6b2d91defda18fd9a66f 365 Gene3D G3DSA:3.40.50.2300 180 359 1.7E-142 T 11-10-2018 VSVS12_02515 0d77c24b7f3a900eefe62e404959d782 411 Gene3D G3DSA:3.40.50.2300 21 141 6.0E-9 T 11-10-2018 VSVS12_02515 0d77c24b7f3a900eefe62e404959d782 411 SUPERFAMILY SSF52540 153 396 1.72E-17 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02515 0d77c24b7f3a900eefe62e404959d782 411 Gene3D G3DSA:3.40.50.300 151 396 1.2E-23 T 11-10-2018 VSVS12_04229 005957a74f59c0ef62fd4e5987246fee 356 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 160 208 - T 11-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_04229 005957a74f59c0ef62fd4e5987246fee 356 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 6 224 1.5E-61 T 11-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_04229 005957a74f59c0ef62fd4e5987246fee 356 SUPERFAMILY SSF46626 194 335 9.32E-24 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VSVS12_04229 005957a74f59c0ef62fd4e5987246fee 356 Gene3D G3DSA:2.60.40.420 88 225 1.5E-81 T 11-10-2018 IPR008972 Cupredoxin VSVS12_04229 005957a74f59c0ef62fd4e5987246fee 356 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 7 77 2.3E-13 T 11-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_04229 005957a74f59c0ef62fd4e5987246fee 356 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 92 214 9.5E-37 T 11-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_04229 005957a74f59c0ef62fd4e5987246fee 356 PRINTS PR01166 Cytochrome c oxidase subunit II signature 159 179 7.0E-41 T 11-10-2018 VSVS12_04229 005957a74f59c0ef62fd4e5987246fee 356 PRINTS PR01166 Cytochrome c oxidase subunit II signature 66 86 7.0E-41 T 11-10-2018 VSVS12_04229 005957a74f59c0ef62fd4e5987246fee 356 PRINTS PR01166 Cytochrome c oxidase subunit II signature 197 214 7.0E-41 T 11-10-2018 VSVS12_04229 005957a74f59c0ef62fd4e5987246fee 356 PRINTS PR01166 Cytochrome c oxidase subunit II signature 135 156 7.0E-41 T 11-10-2018 VSVS12_04229 005957a74f59c0ef62fd4e5987246fee 356 PRINTS PR01166 Cytochrome c oxidase subunit II signature 54 66 7.0E-41 T 11-10-2018 VSVS12_04229 005957a74f59c0ef62fd4e5987246fee 356 PRINTS PR01166 Cytochrome c oxidase subunit II signature 179 196 7.0E-41 T 11-10-2018 VSVS12_04229 005957a74f59c0ef62fd4e5987246fee 356 PRINTS PR01166 Cytochrome c oxidase subunit II signature 88 107 7.0E-41 T 11-10-2018 VSVS12_04229 005957a74f59c0ef62fd4e5987246fee 356 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 252 325 7.7E-10 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_04229 005957a74f59c0ef62fd4e5987246fee 356 Gene3D G3DSA:1.10.287.90 16 87 1.5E-81 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_04229 005957a74f59c0ef62fd4e5987246fee 356 SUPERFAMILY SSF49503 90 228 1.56E-53 T 11-10-2018 IPR008972 Cupredoxin VSVS12_04229 005957a74f59c0ef62fd4e5987246fee 356 SUPERFAMILY SSF81464 3 86 1.21E-25 T 11-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_04229 005957a74f59c0ef62fd4e5987246fee 356 Gene3D G3DSA:1.10.760.10 233 356 4.9E-26 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VSVS12_00788 3d646a537f265294c63159fc9a3ccd83 325 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 15 313 3.3E-103 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VSVS12_00788 3d646a537f265294c63159fc9a3ccd83 325 Gene3D G3DSA:3.30.2350.10 85 316 9.2E-73 T 11-10-2018 VSVS12_00788 3d646a537f265294c63159fc9a3ccd83 325 SUPERFAMILY SSF55120 77 316 3.08E-79 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VSVS12_00788 3d646a537f265294c63159fc9a3ccd83 325 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VSVS12_00788 3d646a537f265294c63159fc9a3ccd83 325 SMART SM00363 18 83 3.5E-7 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00788 3d646a537f265294c63159fc9a3ccd83 325 Pfam PF01479 S4 domain 18 65 1.9E-8 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00788 3d646a537f265294c63159fc9a3ccd83 325 Pfam PF00849 RNA pseudouridylate synthase 92 241 8.8E-31 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VSVS12_00788 3d646a537f265294c63159fc9a3ccd83 325 Gene3D G3DSA:3.10.290.10 2 76 1.2E-22 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VSVS12_00788 3d646a537f265294c63159fc9a3ccd83 325 SUPERFAMILY SSF55174 17 68 3.2E-10 T 11-10-2018 VSVS12_01211 51173a0f59c5bdfc31d5e5d2c4092936 198 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 28 186 1.0E-55 T 11-10-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like VSVS12_01211 51173a0f59c5bdfc31d5e5d2c4092936 198 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 5 197 1.1E-65 T 11-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 VSVS12_01211 51173a0f59c5bdfc31d5e5d2c4092936 198 SUPERFAMILY SSF89392 20 197 1.26E-51 T 11-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX VSVS12_01211 51173a0f59c5bdfc31d5e5d2c4092936 198 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 5 196 31.673 T 11-10-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 VSVS12_01211 51173a0f59c5bdfc31d5e5d2c4092936 198 Gene3D G3DSA:2.50.20.10 16 197 6.9E-49 T 11-10-2018 VSVS12_00350 c5fffb4206f45229c012af46676e3b57 363 Pfam PF08666 SAF domain 305 357 1.6E-8 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 VSVS12_00350 c5fffb4206f45229c012af46676e3b57 363 SUPERFAMILY SSF51269 299 362 1.04E-18 T 11-10-2018 IPR036732 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal domain superfamily Reactome: R-HSA-4085001 VSVS12_00350 c5fffb4206f45229c012af46676e3b57 363 TIGRFAM TIGR03586 PseI: pseudaminic acid synthase 30 356 3.4E-159 T 11-10-2018 IPR020030 Pseudaminic acid biosynthesis, PseI KEGG: 00520+2.5.1.97|MetaCyc: PWY-6143 VSVS12_00350 c5fffb4206f45229c012af46676e3b57 363 SMART SM00858 304 362 1.1E-7 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 VSVS12_00350 c5fffb4206f45229c012af46676e3b57 363 Pfam PF03102 NeuB family 52 290 2.0E-89 T 11-10-2018 IPR013132 N-acetylneuraminic acid synthase, N-terminal GO:0016051 Reactome: R-HSA-4085001 VSVS12_00350 c5fffb4206f45229c012af46676e3b57 363 Gene3D G3DSA:3.20.20.70 17 290 1.5E-93 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_00350 c5fffb4206f45229c012af46676e3b57 363 SUPERFAMILY SSF51569 18 314 3.42E-92 T 11-10-2018 VSVS12_00350 c5fffb4206f45229c012af46676e3b57 363 Gene3D G3DSA:3.90.1210.10 305 363 3.2E-19 T 11-10-2018 VSVS12_02983 7337f6cd0c372b478df11d169990d9a6 306 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 1 304 7.0E-125 T 11-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 VSVS12_02983 7337f6cd0c372b478df11d169990d9a6 306 SUPERFAMILY SSF51395 1 303 1.46E-85 T 11-10-2018 VSVS12_02983 7337f6cd0c372b478df11d169990d9a6 306 Pfam PF01207 Dihydrouridine synthase (Dus) 1 297 2.1E-107 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VSVS12_02983 7337f6cd0c372b478df11d169990d9a6 306 PIRSF PIRSF006621 1 305 3.8E-96 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VSVS12_02983 7337f6cd0c372b478df11d169990d9a6 306 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 78 96 - T 11-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 VSVS12_02983 7337f6cd0c372b478df11d169990d9a6 306 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 305 45.978 T 11-10-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 VSVS12_02983 7337f6cd0c372b478df11d169990d9a6 306 Gene3D G3DSA:3.20.20.70 1 232 7.5E-74 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_02983 7337f6cd0c372b478df11d169990d9a6 306 Gene3D G3DSA:1.10.1200.80 237 305 2.4E-6 T 11-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 VSVS12_00153 ef77d4808e2d9c048624b3a99bb6d4d8 154 SUPERFAMILY SSF54909 69 154 4.69E-19 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel VSVS12_00153 ef77d4808e2d9c048624b3a99bb6d4d8 154 SMART SM00344 8 115 3.3E-38 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VSVS12_00153 ef77d4808e2d9c048624b3a99bb6d4d8 154 SUPERFAMILY SSF46785 7 68 7.14E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_00153 ef77d4808e2d9c048624b3a99bb6d4d8 154 Pfam PF13404 AsnC-type helix-turn-helix domain 8 49 5.8E-13 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VSVS12_00153 ef77d4808e2d9c048624b3a99bb6d4d8 154 Pfam PF01037 Lrp/AsnC ligand binding domain 75 145 1.8E-16 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VSVS12_00153 ef77d4808e2d9c048624b3a99bb6d4d8 154 Gene3D G3DSA:1.10.10.10 4 59 1.6E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_00153 ef77d4808e2d9c048624b3a99bb6d4d8 154 Gene3D G3DSA:3.30.70.920 60 142 1.7E-31 T 11-10-2018 VSVS12_00153 ef77d4808e2d9c048624b3a99bb6d4d8 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 8 24 4.1E-9 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VSVS12_00153 ef77d4808e2d9c048624b3a99bb6d4d8 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 35 54 4.1E-9 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VSVS12_00153 ef77d4808e2d9c048624b3a99bb6d4d8 154 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 24 35 4.1E-9 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VSVS12_03019 ac7a557ad2dc6808c16bd59047796ec4 163 Pfam PF00583 Acetyltransferase (GNAT) family 40 136 1.1E-15 T 11-10-2018 IPR000182 GNAT domain VSVS12_03019 ac7a557ad2dc6808c16bd59047796ec4 163 Gene3D G3DSA:3.40.630.30 2 163 1.3E-37 T 11-10-2018 VSVS12_03019 ac7a557ad2dc6808c16bd59047796ec4 163 SUPERFAMILY SSF55729 3 161 9.26E-35 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_00340 b66bd21f286c8a612d739895f2285f46 611 Pfam PF00884 Sulfatase 248 527 8.2E-33 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VSVS12_00340 b66bd21f286c8a612d739895f2285f46 611 PIRSF PIRSF004950 1 611 1.5E-214 T 11-10-2018 IPR012159 Inner membrane protein YejM VSVS12_00340 b66bd21f286c8a612d739895f2285f46 611 Pfam PF11893 Domain of unknown function (DUF3413) 3 239 7.4E-57 T 11-10-2018 IPR024588 Inner membrane protein YejM, N-terminal VSVS12_00340 b66bd21f286c8a612d739895f2285f46 611 Gene3D G3DSA:3.40.720.10 238 558 1.4E-55 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VSVS12_00340 b66bd21f286c8a612d739895f2285f46 611 SUPERFAMILY SSF53649 245 577 1.44E-58 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VSVS12_02335 c7a6a261ba846c1ee244ae23aea312b5 281 Gene3D G3DSA:3.30.1130.10 21 138 2.1E-45 T 11-10-2018 VSVS12_02335 c7a6a261ba846c1ee244ae23aea312b5 281 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 281 160.488 T 11-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 VSVS12_02335 c7a6a261ba846c1ee244ae23aea312b5 281 TIGRFAM TIGR03138 QueF: queuine synthase 11 281 1.4E-128 T 11-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 VSVS12_02335 c7a6a261ba846c1ee244ae23aea312b5 281 PIRSF PIRSF004750 6 281 6.4E-128 T 11-10-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 VSVS12_02335 c7a6a261ba846c1ee244ae23aea312b5 281 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 130 3.7E-47 T 11-10-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 VSVS12_02335 c7a6a261ba846c1ee244ae23aea312b5 281 Pfam PF14489 QueF-like protein 194 270 3.6E-27 T 11-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 VSVS12_02335 c7a6a261ba846c1ee244ae23aea312b5 281 Gene3D G3DSA:3.30.1130.10 143 281 1.1E-63 T 11-10-2018 VSVS12_02335 c7a6a261ba846c1ee244ae23aea312b5 281 SUPERFAMILY SSF55620 184 267 1.11E-9 T 11-10-2018 VSVS12_01734 6e3be352881b0c01aeee63cdbe21c810 288 Gene3D G3DSA:3.90.1200.10 97 287 1.3E-64 T 11-10-2018 VSVS12_01734 6e3be352881b0c01aeee63cdbe21c810 288 SUPERFAMILY SSF56112 19 282 3.06E-39 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily VSVS12_01734 6e3be352881b0c01aeee63cdbe21c810 288 Gene3D G3DSA:3.30.200.20 1 93 4.2E-20 T 11-10-2018 VSVS12_01734 6e3be352881b0c01aeee63cdbe21c810 288 PIRSF PIRSF006221 1 288 1.6E-102 T 11-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 VSVS12_01734 6e3be352881b0c01aeee63cdbe21c810 288 Pfam PF03881 Fructosamine kinase 1 285 6.1E-120 T 11-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 VSVS12_01328 0292d5d36bdd62a5e48f356238dd1fc7 179 Gene3D G3DSA:3.30.70.20 56 106 2.7E-10 T 11-10-2018 VSVS12_01328 0292d5d36bdd62a5e48f356238dd1fc7 179 Gene3D G3DSA:3.30.70.20 119 174 7.4E-8 T 11-10-2018 VSVS12_01328 0292d5d36bdd62a5e48f356238dd1fc7 179 SUPERFAMILY SSF54862 54 175 5.92E-16 T 11-10-2018 VSVS12_01328 0292d5d36bdd62a5e48f356238dd1fc7 179 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 60 71 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VSVS12_01328 0292d5d36bdd62a5e48f356238dd1fc7 179 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 19 173 1.4E-30 T 11-10-2018 IPR004496 Ferredoxin-type protein NapF GO:0051539 VSVS12_01328 0292d5d36bdd62a5e48f356238dd1fc7 179 Pfam PF00037 4Fe-4S binding domain 156 174 1.2E-4 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VSVS12_01328 0292d5d36bdd62a5e48f356238dd1fc7 179 Pfam PF13187 4Fe-4S dicluster domain 60 105 6.6E-9 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VSVS12_02188 50f975aa6ef0ed779aca2ea53f63a780 197 Pfam PF04993 TfoX N-terminal domain 12 101 3.5E-28 T 11-10-2018 IPR007076 TfoX, N-terminal VSVS12_02188 50f975aa6ef0ed779aca2ea53f63a780 197 Pfam PF04994 TfoX C-terminal domain 115 193 4.3E-31 T 11-10-2018 IPR007077 TfoX, C-terminal VSVS12_02188 50f975aa6ef0ed779aca2ea53f63a780 197 Gene3D G3DSA:3.30.1460.30 1 105 6.2E-35 T 11-10-2018 VSVS12_02188 50f975aa6ef0ed779aca2ea53f63a780 197 Gene3D G3DSA:1.10.150.20 114 197 9.6E-25 T 11-10-2018 VSVS12_02188 50f975aa6ef0ed779aca2ea53f63a780 197 SUPERFAMILY SSF159894 5 103 3.4E-29 T 11-10-2018 VSVS12_02188 50f975aa6ef0ed779aca2ea53f63a780 197 PIRSF PIRSF028788 1 197 9.0E-46 T 11-10-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type VSVS12_03908 8b5eb46a97b17d9127c46b917110e536 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 1.2E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_03908 8b5eb46a97b17d9127c46b917110e536 295 Pfam PF03466 LysR substrate binding domain 124 292 1.3E-12 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_03908 8b5eb46a97b17d9127c46b917110e536 295 SUPERFAMILY SSF53850 123 292 6.33E-16 T 11-10-2018 VSVS12_03908 8b5eb46a97b17d9127c46b917110e536 295 Gene3D G3DSA:1.10.10.10 5 90 2.9E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_03908 8b5eb46a97b17d9127c46b917110e536 295 Gene3D G3DSA:3.40.190.290 96 283 4.7E-8 T 11-10-2018 VSVS12_03908 8b5eb46a97b17d9127c46b917110e536 295 SUPERFAMILY SSF46785 5 85 1.48E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_03028 a5cec209266d1e8c97f3d14521ced37e 1042 Gene3D G3DSA:3.20.20.220 154 525 1.5E-129 T 11-10-2018 VSVS12_03028 a5cec209266d1e8c97f3d14521ced37e 1042 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 839 850 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VSVS12_03028 a5cec209266d1e8c97f3d14521ced37e 1042 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 526 1037 7.2E-249 T 11-10-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 VSVS12_03028 a5cec209266d1e8c97f3d14521ced37e 1042 SUPERFAMILY SSF53720 576 1036 2.62E-125 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VSVS12_03028 a5cec209266d1e8c97f3d14521ced37e 1042 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 73 187 1.8E-45 T 11-10-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 VSVS12_03028 a5cec209266d1e8c97f3d14521ced37e 1042 PIRSF PIRSF000197 3 1041 0.0 T 11-10-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 VSVS12_03028 a5cec209266d1e8c97f3d14521ced37e 1042 Pfam PF00171 Aldehyde dehydrogenase family 585 1037 2.0E-116 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VSVS12_03028 a5cec209266d1e8c97f3d14521ced37e 1042 Pfam PF01619 Proline dehydrogenase 198 490 6.3E-91 T 11-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 VSVS12_03028 a5cec209266d1e8c97f3d14521ced37e 1042 SUPERFAMILY SSF81935 17 189 6.93E-64 T 11-10-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 VSVS12_03028 a5cec209266d1e8c97f3d14521ced37e 1042 Gene3D G3DSA:3.40.605.10 578 1036 1.3E-147 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VSVS12_03028 a5cec209266d1e8c97f3d14521ced37e 1042 Gene3D G3DSA:3.40.309.10 814 1006 1.3E-147 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VSVS12_03028 a5cec209266d1e8c97f3d14521ced37e 1042 SUPERFAMILY SSF51730 190 532 3.92E-110 T 11-10-2018 IPR029041 FAD-linked oxidoreductase-like VSVS12_03869 f3f5037ca12cb9f6e0a3938a7faa2cf2 325 Gene3D G3DSA:3.40.50.2300 1 141 2.7E-34 T 11-10-2018 VSVS12_03869 f3f5037ca12cb9f6e0a3938a7faa2cf2 325 Pfam PF00990 Diguanylate cyclase, GGDEF domain 152 311 1.1E-41 T 11-10-2018 IPR000160 GGDEF domain VSVS12_03869 f3f5037ca12cb9f6e0a3938a7faa2cf2 325 Gene3D G3DSA:3.30.70.270 142 318 6.4E-51 T 11-10-2018 VSVS12_03869 f3f5037ca12cb9f6e0a3938a7faa2cf2 325 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 147 315 7.6E-45 T 11-10-2018 IPR000160 GGDEF domain VSVS12_03869 f3f5037ca12cb9f6e0a3938a7faa2cf2 325 Pfam PF00072 Response regulator receiver domain 10 119 9.9E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_03869 f3f5037ca12cb9f6e0a3938a7faa2cf2 325 SUPERFAMILY SSF55073 156 318 1.73E-43 T 11-10-2018 IPR029787 Nucleotide cyclase VSVS12_03869 f3f5037ca12cb9f6e0a3938a7faa2cf2 325 SMART SM00448 8 120 1.7E-35 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_03869 f3f5037ca12cb9f6e0a3938a7faa2cf2 325 SUPERFAMILY SSF52172 6 149 1.71E-37 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_03869 f3f5037ca12cb9f6e0a3938a7faa2cf2 325 SMART SM00267 140 316 8.9E-47 T 11-10-2018 IPR000160 GGDEF domain VSVS12_03311 965d7be7ed730f19c0aaa7b2d9f4fa1c 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 45 60 3.3E-7 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VSVS12_03311 965d7be7ed730f19c0aaa7b2d9f4fa1c 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 60 75 3.3E-7 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VSVS12_03311 965d7be7ed730f19c0aaa7b2d9f4fa1c 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 3.3E-7 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VSVS12_03311 965d7be7ed730f19c0aaa7b2d9f4fa1c 98 SMART SM00418 8 85 4.4E-6 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VSVS12_03311 965d7be7ed730f19c0aaa7b2d9f4fa1c 98 Pfam PF12840 Helix-turn-helix domain 8 69 1.6E-12 T 11-10-2018 VSVS12_03311 965d7be7ed730f19c0aaa7b2d9f4fa1c 98 Gene3D G3DSA:1.10.10.10 1 98 1.5E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_03311 965d7be7ed730f19c0aaa7b2d9f4fa1c 98 SUPERFAMILY SSF46785 1 93 6.72E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_03609 4f4ad2f18e537ad02c8989ad05043bea 118 Gene3D G3DSA:3.90.1150.30 1 116 9.1E-39 T 11-10-2018 IPR038056 YjbR-like superfamily VSVS12_03609 4f4ad2f18e537ad02c8989ad05043bea 118 Pfam PF04237 YjbR 12 102 3.8E-25 T 11-10-2018 IPR007351 Uncharacterised protein YjbR VSVS12_03609 4f4ad2f18e537ad02c8989ad05043bea 118 SUPERFAMILY SSF142906 1 115 4.19E-36 T 11-10-2018 IPR038056 YjbR-like superfamily VSVS12_04185 1df911872506ee173c98d72315c2c156 308 Pfam PF00589 Phage integrase family 140 296 4.5E-10 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VSVS12_04185 1df911872506ee173c98d72315c2c156 308 Gene3D G3DSA:1.10.443.10 116 303 4.5E-24 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VSVS12_04185 1df911872506ee173c98d72315c2c156 308 Pfam PF13102 Phage integrase SAM-like domain 17 106 2.5E-5 T 11-10-2018 IPR025269 Phage integrase SAM-like domain VSVS12_04185 1df911872506ee173c98d72315c2c156 308 Gene3D G3DSA:1.10.150.130 9 115 9.3E-15 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal VSVS12_04185 1df911872506ee173c98d72315c2c156 308 SUPERFAMILY SSF56349 13 296 2.3E-32 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VSVS12_03467 e25108dfd0832da6ae5ed0d08d7c88de 418 SMART SM00671 327 362 0.0058 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_03467 e25108dfd0832da6ae5ed0d08d7c88de 418 SMART SM00671 220 253 250.0 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_03467 e25108dfd0832da6ae5ed0d08d7c88de 418 SUPERFAMILY SSF81901 230 395 5.23E-17 T 11-10-2018 VSVS12_03467 e25108dfd0832da6ae5ed0d08d7c88de 418 Gene3D G3DSA:1.25.40.10 219 408 1.3E-18 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_02590 99e155dfa5564ab9b6c4c9fc634895e8 193 SUPERFAMILY SSF53474 5 192 5.26E-19 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold VSVS12_02590 99e155dfa5564ab9b6c4c9fc634895e8 193 Gene3D G3DSA:3.40.50.1820 5 193 2.5E-62 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold VSVS12_02590 99e155dfa5564ab9b6c4c9fc634895e8 193 Pfam PF05728 Uncharacterised protein family (UPF0227) 6 191 4.8E-72 T 11-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA VSVS12_02548 97600f90434822aed25c96011a265547 288 Pfam PF03466 LysR substrate binding domain 90 276 5.0E-15 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_02548 97600f90434822aed25c96011a265547 288 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 7.2E-13 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_02548 97600f90434822aed25c96011a265547 288 Gene3D G3DSA:1.10.10.10 4 67 6.2E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_02548 97600f90434822aed25c96011a265547 288 SUPERFAMILY SSF53850 90 279 4.89E-18 T 11-10-2018 VSVS12_02548 97600f90434822aed25c96011a265547 288 SUPERFAMILY SSF46785 4 82 2.99E-11 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_02548 97600f90434822aed25c96011a265547 288 Gene3D G3DSA:3.40.190.290 82 274 7.5E-11 T 11-10-2018 VSVS12_01338 7eadcae26ff544967abcdc519109bf1a 96 Pfam PF13683 Integrase core domain 23 89 6.6E-11 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VSVS12_01338 7eadcae26ff544967abcdc519109bf1a 96 SUPERFAMILY SSF53098 1 93 8.72E-16 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_02531 7eadcae26ff544967abcdc519109bf1a 96 Pfam PF13683 Integrase core domain 23 89 6.6E-11 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VSVS12_02531 7eadcae26ff544967abcdc519109bf1a 96 SUPERFAMILY SSF53098 1 93 8.72E-16 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_01832 0fdde146a12087d0d1a9ea94fada8c5a 207 Gene3D G3DSA:3.30.1330.60 74 187 2.7E-30 T 11-10-2018 IPR036737 OmpA-like domain superfamily VSVS12_01832 0fdde146a12087d0d1a9ea94fada8c5a 207 PRINTS PR01021 OMPA domain signature 118 133 1.7E-9 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VSVS12_01832 0fdde146a12087d0d1a9ea94fada8c5a 207 PRINTS PR01021 OMPA domain signature 133 149 1.7E-9 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VSVS12_01832 0fdde146a12087d0d1a9ea94fada8c5a 207 PRINTS PR01021 OMPA domain signature 88 110 1.7E-9 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VSVS12_01832 0fdde146a12087d0d1a9ea94fada8c5a 207 Pfam PF00691 OmpA family 87 182 1.0E-18 T 11-10-2018 IPR006665 OmpA-like domain VSVS12_01832 0fdde146a12087d0d1a9ea94fada8c5a 207 SUPERFAMILY SSF103088 61 187 7.72E-30 T 11-10-2018 IPR036737 OmpA-like domain superfamily VSVS12_00807 a9d5ff3b17f9e9119a8eec1846c50686 404 PIRSF PIRSF005572 2 384 2.5E-137 T 11-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 VSVS12_00807 a9d5ff3b17f9e9119a8eec1846c50686 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VSVS12_00807 a9d5ff3b17f9e9119a8eec1846c50686 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 53.864 T 11-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 VSVS12_00807 a9d5ff3b17f9e9119a8eec1846c50686 404 Gene3D G3DSA:3.40.640.10 16 262 2.8E-167 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VSVS12_00807 a9d5ff3b17f9e9119a8eec1846c50686 404 Gene3D G3DSA:3.90.1150.10 5 375 2.8E-167 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VSVS12_00807 a9d5ff3b17f9e9119a8eec1846c50686 404 Pfam PF00266 Aminotransferase class-V 5 368 1.4E-86 T 11-10-2018 IPR000192 Aminotransferase class V domain VSVS12_00807 a9d5ff3b17f9e9119a8eec1846c50686 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 1.3E-229 T 11-10-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 VSVS12_00807 a9d5ff3b17f9e9119a8eec1846c50686 404 SUPERFAMILY SSF53383 5 391 3.23E-114 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VSVS12_01071 5fd4e31d3e3f97a4388ce5ec345fef3a 768 Gene3D G3DSA:3.40.1110.10 473 591 5.5E-83 T 11-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 VSVS12_01071 5fd4e31d3e3f97a4388ce5ec345fef3a 768 Gene3D G3DSA:2.70.150.20 261 366 1.7E-32 T 11-10-2018 VSVS12_01071 5fd4e31d3e3f97a4388ce5ec345fef3a 768 SUPERFAMILY SSF81665 214 745 8.63E-20 T 11-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 VSVS12_01071 5fd4e31d3e3f97a4388ce5ec345fef3a 768 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 234 736 5.8E-86 T 11-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 VSVS12_01071 5fd4e31d3e3f97a4388ce5ec345fef3a 768 Pfam PF00122 E1-E2 ATPase 262 442 2.8E-49 T 11-10-2018 VSVS12_01071 5fd4e31d3e3f97a4388ce5ec345fef3a 768 ProSitePatterns PS01047 Heavy-metal-associated domain. 76 105 - T 11-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 VSVS12_01071 5fd4e31d3e3f97a4388ce5ec345fef3a 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 462 476 1.2E-27 T 11-10-2018 VSVS12_01071 5fd4e31d3e3f97a4388ce5ec345fef3a 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 657 676 1.2E-27 T 11-10-2018 VSVS12_01071 5fd4e31d3e3f97a4388ce5ec345fef3a 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 311 325 1.2E-27 T 11-10-2018 VSVS12_01071 5fd4e31d3e3f97a4388ce5ec345fef3a 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 680 692 1.2E-27 T 11-10-2018 VSVS12_01071 5fd4e31d3e3f97a4388ce5ec345fef3a 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 584 595 1.2E-27 T 11-10-2018 VSVS12_01071 5fd4e31d3e3f97a4388ce5ec345fef3a 768 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 606 616 1.2E-27 T 11-10-2018 VSVS12_01071 5fd4e31d3e3f97a4388ce5ec345fef3a 768 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 464 470 - T 11-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 VSVS12_01071 5fd4e31d3e3f97a4388ce5ec345fef3a 768 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 211 570 1.5E-97 T 11-10-2018 VSVS12_01071 5fd4e31d3e3f97a4388ce5ec345fef3a 768 Pfam PF00702 haloacid dehalogenase-like hydrolase 459 670 4.3E-38 T 11-10-2018 VSVS12_01071 5fd4e31d3e3f97a4388ce5ec345fef3a 768 SUPERFAMILY SSF55008 70 135 9.03E-13 T 11-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 VSVS12_01071 5fd4e31d3e3f97a4388ce5ec345fef3a 768 SUPERFAMILY SSF81653 264 361 4.32E-23 T 11-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 VSVS12_01071 5fd4e31d3e3f97a4388ce5ec345fef3a 768 Pfam PF00403 Heavy-metal-associated domain 76 126 3.8E-9 T 11-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 VSVS12_01071 5fd4e31d3e3f97a4388ce5ec345fef3a 768 Gene3D G3DSA:3.40.50.1000 443 709 5.5E-83 T 11-10-2018 IPR023214 HAD superfamily VSVS12_01071 5fd4e31d3e3f97a4388ce5ec345fef3a 768 Gene3D G3DSA:3.30.70.100 70 137 1.1E-13 T 11-10-2018 VSVS12_01071 5fd4e31d3e3f97a4388ce5ec345fef3a 768 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 211 759 1.4E-175 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VSVS12_01071 5fd4e31d3e3f97a4388ce5ec345fef3a 768 SUPERFAMILY SSF56784 461 757 3.02E-51 T 11-10-2018 IPR036412 HAD-like superfamily VSVS12_01071 5fd4e31d3e3f97a4388ce5ec345fef3a 768 ProSitePatterns PS01229 Hypothetical cof family signature 2. 657 679 - T 11-10-2018 VSVS12_01071 5fd4e31d3e3f97a4388ce5ec345fef3a 768 PRINTS PR00941 Cadmium-transporting ATPase signature 246 266 5.9E-8 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VSVS12_01071 5fd4e31d3e3f97a4388ce5ec345fef3a 768 PRINTS PR00941 Cadmium-transporting ATPase signature 74 83 5.9E-8 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VSVS12_01071 5fd4e31d3e3f97a4388ce5ec345fef3a 768 PRINTS PR00941 Cadmium-transporting ATPase signature 85 106 5.9E-8 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VSVS12_01071 5fd4e31d3e3f97a4388ce5ec345fef3a 768 PRINTS PR00941 Cadmium-transporting ATPase signature 346 360 5.9E-8 T 11-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 VSVS12_02697 04891c03e35525c74cbd4836c5d05469 305 SUPERFAMILY SSF103481 186 288 4.97E-9 T 11-10-2018 VSVS12_02697 04891c03e35525c74cbd4836c5d05469 305 Pfam PF00892 EamA-like transporter family 18 146 4.4E-13 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VSVS12_02697 04891c03e35525c74cbd4836c5d05469 305 Pfam PF00892 EamA-like transporter family 157 283 8.7E-9 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VSVS12_02697 04891c03e35525c74cbd4836c5d05469 305 SUPERFAMILY SSF103481 49 146 1.57E-9 T 11-10-2018 VSVS12_01063 56d0e8418ed0bc71dd525147ba2dce9b 295 SUPERFAMILY SSF142338 7 290 1.57E-81 T 11-10-2018 VSVS12_01063 56d0e8418ed0bc71dd525147ba2dce9b 295 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 9 261 2.9E-100 T 11-10-2018 IPR010119 Gluconeogenesis factor VSVS12_01063 56d0e8418ed0bc71dd525147ba2dce9b 295 Gene3D G3DSA:3.40.50.12300 4 295 2.1E-77 T 11-10-2018 IPR038136 Gluconeogenesis factor superfamily VSVS12_01063 56d0e8418ed0bc71dd525147ba2dce9b 295 Hamap MF_00973 Gluconeogenesis factor. 5 295 30.528 T 11-10-2018 IPR010119 Gluconeogenesis factor VSVS12_01063 56d0e8418ed0bc71dd525147ba2dce9b 295 Pfam PF01933 Uncharacterised protein family UPF0052 9 289 2.8E-73 T 11-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 VSVS12_00942 0803e6c862bedad9cbeb1b8548961f13 275 Gene3D G3DSA:3.40.50.720 2 263 2.2E-59 T 11-10-2018 VSVS12_00942 0803e6c862bedad9cbeb1b8548961f13 275 Pfam PF00106 short chain dehydrogenase 3 187 9.0E-41 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_00942 0803e6c862bedad9cbeb1b8548961f13 275 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VSVS12_00942 0803e6c862bedad9cbeb1b8548961f13 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 5.0E-18 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_00942 0803e6c862bedad9cbeb1b8548961f13 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 5.0E-18 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_00942 0803e6c862bedad9cbeb1b8548961f13 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 5.0E-18 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_00942 0803e6c862bedad9cbeb1b8548961f13 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 5.0E-18 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_00942 0803e6c862bedad9cbeb1b8548961f13 275 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 5.0E-18 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_00942 0803e6c862bedad9cbeb1b8548961f13 275 SUPERFAMILY SSF51735 2 209 2.44E-56 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_00703 6fce80e6978f3b12be8378eab400c91c 291 SUPERFAMILY SSF53067 114 283 3.29E-44 T 11-10-2018 VSVS12_00703 6fce80e6978f3b12be8378eab400c91c 291 Gene3D G3DSA:3.30.420.40 115 261 4.5E-69 T 11-10-2018 VSVS12_00703 6fce80e6978f3b12be8378eab400c91c 291 Gene3D G3DSA:3.30.420.40 4 114 4.5E-69 T 11-10-2018 VSVS12_00703 6fce80e6978f3b12be8378eab400c91c 291 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 6 283 1.7E-47 T 11-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 VSVS12_00703 6fce80e6978f3b12be8378eab400c91c 291 SUPERFAMILY SSF53067 2 111 9.83E-24 T 11-10-2018 VSVS12_00497 7fc5641f69291cbf481ff2b64259efcd 126 SUPERFAMILY SSF64263 1 119 5.36E-51 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00497 7fc5641f69291cbf481ff2b64259efcd 126 Pfam PF01196 Ribosomal protein L17 20 116 1.0E-34 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00497 7fc5641f69291cbf481ff2b64259efcd 126 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 5.5E-49 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00497 7fc5641f69291cbf481ff2b64259efcd 126 Gene3D G3DSA:3.90.1030.10 1 117 4.0E-48 T 11-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00497 7fc5641f69291cbf481ff2b64259efcd 126 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00497 7fc5641f69291cbf481ff2b64259efcd 126 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 26.798 T 11-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_04101 fcd7fbbcb06d651bac13459eee64a36b 481 SUPERFAMILY SSF75005 33 341 8.01E-96 T 11-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily VSVS12_04101 fcd7fbbcb06d651bac13459eee64a36b 481 SMART SM00640 41 444 1.9E-127 T 11-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 VSVS12_04101 fcd7fbbcb06d651bac13459eee64a36b 481 SUPERFAMILY SSF49899 341 456 8.44E-15 T 11-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily VSVS12_04101 fcd7fbbcb06d651bac13459eee64a36b 481 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 41 341 8.1E-96 T 11-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal VSVS12_04101 fcd7fbbcb06d651bac13459eee64a36b 481 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 364 455 2.8E-11 T 11-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal VSVS12_04101 fcd7fbbcb06d651bac13459eee64a36b 481 Gene3D G3DSA:2.60.120.560 351 461 2.6E-111 T 11-10-2018 VSVS12_04101 fcd7fbbcb06d651bac13459eee64a36b 481 Gene3D G3DSA:2.115.10.20 38 350 2.6E-111 T 11-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily VSVS12_04101 fcd7fbbcb06d651bac13459eee64a36b 481 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 41 54 - T 11-10-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 VSVS12_04101 fcd7fbbcb06d651bac13459eee64a36b 481 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 26 455 3.6E-173 T 11-10-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 VSVS12_03784 a9de004845455d7fbe1e1a1122d5bafa 83 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 11 59 4.7E-7 T 11-10-2018 VSVS12_03784 a9de004845455d7fbe1e1a1122d5bafa 83 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 10 71 1.5E-12 T 11-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM VSVS12_03784 a9de004845455d7fbe1e1a1122d5bafa 83 SUPERFAMILY SSF143120 11 68 3.14E-10 T 11-10-2018 IPR036165 YefM-like superfamily VSVS12_02500 836e247b9b9b2fa5f48e4b7de4e3c9ce 373 SUPERFAMILY SSF53955 181 365 1.18E-36 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily VSVS12_02500 836e247b9b9b2fa5f48e4b7de4e3c9ce 373 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 223 251 - T 11-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VSVS12_02500 836e247b9b9b2fa5f48e4b7de4e3c9ce 373 Pfam PF11873 Domain of unknown function (DUF3393) 5 200 2.5E-64 T 11-10-2018 IPR024570 Murein transglycosylase-C, N-terminal VSVS12_02500 836e247b9b9b2fa5f48e4b7de4e3c9ce 373 Pfam PF01464 Transglycosylase SLT domain 205 327 2.1E-27 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 VSVS12_02500 836e247b9b9b2fa5f48e4b7de4e3c9ce 373 Gene3D G3DSA:1.10.530.10 185 364 5.0E-48 T 11-10-2018 VSVS12_02129 f142879eb58973421338d8a1b9cbe99e 363 SUPERFAMILY SSF101478 12 338 3.01E-59 T 11-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily VSVS12_02129 f142879eb58973421338d8a1b9cbe99e 363 Pfam PF03747 ADP-ribosylglycohydrolase 18 328 2.5E-56 T 11-10-2018 IPR005502 ADP-ribosylation/Crystallin J1 VSVS12_02129 f142879eb58973421338d8a1b9cbe99e 363 Gene3D G3DSA:1.10.4080.10 8 353 8.2E-68 T 11-10-2018 IPR036705 ADP-ribosylation/Crystallin J1 superfamily VSVS12_03678 d44c9e5e84fc4bb8339fae3a2daa9041 482 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 11-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VSVS12_03678 d44c9e5e84fc4bb8339fae3a2daa9041 482 SUPERFAMILY SSF48179 177 472 4.65E-126 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VSVS12_03678 d44c9e5e84fc4bb8339fae3a2daa9041 482 Gene3D G3DSA:1.10.1040.10 181 434 4.5E-102 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VSVS12_03678 d44c9e5e84fc4bb8339fae3a2daa9041 482 SMART SM01350 179 469 2.2E-213 T 11-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VSVS12_03678 d44c9e5e84fc4bb8339fae3a2daa9041 482 PIRSF PIRSF000109 1 477 3.3E-242 T 11-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VSVS12_03678 d44c9e5e84fc4bb8339fae3a2daa9041 482 Gene3D G3DSA:3.40.50.720 1 180 8.8E-56 T 11-10-2018 VSVS12_03678 d44c9e5e84fc4bb8339fae3a2daa9041 482 SUPERFAMILY SSF51735 4 174 4.05E-55 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_03678 d44c9e5e84fc4bb8339fae3a2daa9041 482 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 468 3.7E-126 T 11-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VSVS12_03678 d44c9e5e84fc4bb8339fae3a2daa9041 482 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 4 469 4.5E-235 T 11-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VSVS12_03678 d44c9e5e84fc4bb8339fae3a2daa9041 482 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 169 4.1E-50 T 11-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 VSVS12_03678 d44c9e5e84fc4bb8339fae3a2daa9041 482 Gene3D G3DSA:1.20.5.320 435 482 2.7E-25 T 11-10-2018 VSVS12_03678 d44c9e5e84fc4bb8339fae3a2daa9041 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 6.5E-85 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VSVS12_03678 d44c9e5e84fc4bb8339fae3a2daa9041 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 6.5E-85 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VSVS12_03678 d44c9e5e84fc4bb8339fae3a2daa9041 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 6.5E-85 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VSVS12_03678 d44c9e5e84fc4bb8339fae3a2daa9041 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 3 26 6.5E-85 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VSVS12_03678 d44c9e5e84fc4bb8339fae3a2daa9041 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 356 378 6.5E-85 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VSVS12_03678 d44c9e5e84fc4bb8339fae3a2daa9041 482 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 6.5E-85 T 11-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 VSVS12_00863 1112bc67aeba321dc1143228d6dae098 874 SUPERFAMILY SSF81593 195 310 9.42E-9 T 11-10-2018 VSVS12_00863 1112bc67aeba321dc1143228d6dae098 874 SUPERFAMILY SSF81301 35 172 1.11E-18 T 11-10-2018 VSVS12_00863 1112bc67aeba321dc1143228d6dae098 874 PIRSF PIRSF006288 6 874 0.0 T 11-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 VSVS12_00863 1112bc67aeba321dc1143228d6dae098 874 Gene3D G3DSA:1.10.3210.10 435 587 1.1E-9 T 11-10-2018 VSVS12_00863 1112bc67aeba321dc1143228d6dae098 874 Gene3D G3DSA:3.30.70.260 795 871 7.7E-6 T 11-10-2018 VSVS12_00863 1112bc67aeba321dc1143228d6dae098 874 SUPERFAMILY SSF55021 689 760 1.53E-7 T 11-10-2018 VSVS12_00863 1112bc67aeba321dc1143228d6dae098 874 SUPERFAMILY SSF109604 418 592 5.18E-16 T 11-10-2018 VSVS12_00863 1112bc67aeba321dc1143228d6dae098 874 Pfam PF01842 ACT domain 799 848 4.6E-8 T 11-10-2018 IPR002912 ACT domain VSVS12_00863 1112bc67aeba321dc1143228d6dae098 874 Pfam PF01966 HD domain 452 584 2.2E-13 T 11-10-2018 IPR006674 HD domain VSVS12_00863 1112bc67aeba321dc1143228d6dae098 874 Pfam PF01909 Nucleotidyltransferase domain 58 108 7.1E-7 T 11-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 VSVS12_00863 1112bc67aeba321dc1143228d6dae098 874 Pfam PF08335 GlnD PII-uridylyltransferase 176 314 5.4E-35 T 11-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 VSVS12_00863 1112bc67aeba321dc1143228d6dae098 874 SUPERFAMILY SSF55021 796 861 1.52E-10 T 11-10-2018 VSVS12_00863 1112bc67aeba321dc1143228d6dae098 874 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 29 869 0.0 T 11-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 VSVS12_00863 1112bc67aeba321dc1143228d6dae098 874 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 874 331.685 T 11-10-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 VSVS12_00863 1112bc67aeba321dc1143228d6dae098 874 SMART SM00471 447 594 1.0E-9 T 11-10-2018 IPR003607 HD/PDEase domain VSVS12_02313 e3ee8e96caf5624f7840a5506f0385ad 377 Gene3D G3DSA:1.20.1330.10 45 179 1.3E-72 T 11-10-2018 VSVS12_02313 e3ee8e96caf5624f7840a5506f0385ad 377 Gene3D G3DSA:1.20.1330.10 285 336 2.5E-46 T 11-10-2018 VSVS12_02313 e3ee8e96caf5624f7840a5506f0385ad 377 Gene3D G3DSA:1.20.58.1830 5 33 1.3E-72 T 11-10-2018 VSVS12_02313 e3ee8e96caf5624f7840a5506f0385ad 377 Gene3D G3DSA:1.20.58.1830 342 376 2.5E-46 T 11-10-2018 VSVS12_02313 e3ee8e96caf5624f7840a5506f0385ad 377 PRINTS PR00207 Flagellin signature 37 54 2.5E-27 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VSVS12_02313 e3ee8e96caf5624f7840a5506f0385ad 377 PRINTS PR00207 Flagellin signature 111 134 2.5E-27 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VSVS12_02313 e3ee8e96caf5624f7840a5506f0385ad 377 PRINTS PR00207 Flagellin signature 76 95 2.5E-27 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VSVS12_02313 e3ee8e96caf5624f7840a5506f0385ad 377 Gene3D G3DSA:2.170.280.10 188 284 2.5E-46 T 11-10-2018 VSVS12_02313 e3ee8e96caf5624f7840a5506f0385ad 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 2.3E-43 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VSVS12_02313 e3ee8e96caf5624f7840a5506f0385ad 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 1.7E-26 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VSVS12_02313 e3ee8e96caf5624f7840a5506f0385ad 377 SUPERFAMILY SSF64518 1 376 5.62E-99 T 11-10-2018 VSVS12_02313 e3ee8e96caf5624f7840a5506f0385ad 377 Pfam PF07196 Flagellin hook IN motif 195 249 1.1E-9 T 11-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VSVS12_03530 9e397f95bbb5ba6215201aff5a521173 263 Gene3D G3DSA:2.60.120.10 13 92 1.5E-5 T 11-10-2018 IPR014710 RmlC-like jelly roll fold VSVS12_03530 9e397f95bbb5ba6215201aff5a521173 263 SMART SM00342 176 258 7.0E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VSVS12_03530 9e397f95bbb5ba6215201aff5a521173 263 Gene3D G3DSA:1.10.10.60 156 261 1.4E-20 T 11-10-2018 VSVS12_03530 9e397f95bbb5ba6215201aff5a521173 263 SUPERFAMILY SSF51182 20 185 5.34E-10 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily VSVS12_03530 9e397f95bbb5ba6215201aff5a521173 263 Pfam PF12833 Helix-turn-helix domain 182 258 5.8E-19 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VSVS12_03530 9e397f95bbb5ba6215201aff5a521173 263 SUPERFAMILY SSF46689 213 260 4.3E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_04435 9dcc9ab30f7a58ff2ec9fcdc26fc2ee8 114 TIGRFAM TIGR03745 conj_TIGR03745: integrating conjugative element membrane protein, PFL_4702 family 10 105 6.5E-16 T 11-10-2018 IPR021356 Integrating conjugative element protein PFL4702 VSVS12_04435 9dcc9ab30f7a58ff2ec9fcdc26fc2ee8 114 Pfam PF11190 Protein of unknown function (DUF2976) 25 106 9.9E-11 T 11-10-2018 IPR021356 Integrating conjugative element protein PFL4702 VSVS12_02058 56c5487908501d02a142e59a09f5f022 262 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 44.511 T 11-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 VSVS12_02058 56c5487908501d02a142e59a09f5f022 262 Gene3D G3DSA:3.20.20.70 1 261 5.7E-94 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_02058 56c5487908501d02a142e59a09f5f022 262 SUPERFAMILY SSF51366 1 256 1.1E-73 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VSVS12_02058 56c5487908501d02a142e59a09f5f022 262 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 1.3E-113 T 11-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 VSVS12_02058 56c5487908501d02a142e59a09f5f022 262 Pfam PF00977 Histidine biosynthesis protein 5 239 2.5E-79 T 11-10-2018 IPR006062 Histidine biosynthesis GO:0000105 VSVS12_03764 166fb1200027836bedeb0dab48c90b51 435 SUPERFAMILY SSF53613 37 418 1.87E-45 T 11-10-2018 IPR029056 Ribokinase-like VSVS12_03764 166fb1200027836bedeb0dab48c90b51 435 Pfam PF00294 pfkB family carbohydrate kinase 139 297 2.3E-11 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB VSVS12_01860 add13d86d37f11dd32f60aa249521ead 296 SUPERFAMILY SSF103481 188 284 4.58E-9 T 11-10-2018 VSVS12_01860 add13d86d37f11dd32f60aa249521ead 296 SUPERFAMILY SSF103481 44 141 6.93E-9 T 11-10-2018 VSVS12_01860 add13d86d37f11dd32f60aa249521ead 296 Pfam PF00892 EamA-like transporter family 152 283 1.4E-6 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VSVS12_01860 add13d86d37f11dd32f60aa249521ead 296 Pfam PF00892 EamA-like transporter family 6 140 3.5E-9 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VSVS12_01860 add13d86d37f11dd32f60aa249521ead 296 TIGRFAM TIGR00688 rarD: protein RarD 10 259 1.8E-44 T 11-10-2018 IPR004626 RarD protein GO:0005887 VSVS12_02094 ed37db51f477f24c94451766ad5494d1 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 11-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 VSVS12_02094 ed37db51f477f24c94451766ad5494d1 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 260 7.0E-21 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase VSVS12_02094 ed37db51f477f24c94451766ad5494d1 268 SUPERFAMILY SSF56219 1 268 3.8E-84 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VSVS12_02094 ed37db51f477f24c94451766ad5494d1 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 267 1.4E-99 T 11-10-2018 VSVS12_02094 ed37db51f477f24c94451766ad5494d1 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 267 4.1E-86 T 11-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 VSVS12_02094 ed37db51f477f24c94451766ad5494d1 268 Gene3D G3DSA:3.60.10.10 1 268 2.7E-78 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VSVS12_02094 ed37db51f477f24c94451766ad5494d1 268 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 198 214 - T 11-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 VSVS12_01857 ebb072e85836a7957520f9a51856ab24 244 SUPERFAMILY SSF53448 3 221 1.78E-40 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VSVS12_01857 ebb072e85836a7957520f9a51856ab24 244 Gene3D G3DSA:3.90.550.10 1 199 2.7E-37 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VSVS12_01857 ebb072e85836a7957520f9a51856ab24 244 Pfam PF00535 Glycosyl transferase family 2 5 113 9.2E-24 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VSVS12_03815 a4cac2b45f871e5159c4288033208a69 419 Gene3D G3DSA:3.40.50.300 1 222 4.4E-79 T 11-10-2018 VSVS12_03815 a4cac2b45f871e5159c4288033208a69 419 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 157 165 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VSVS12_03815 a4cac2b45f871e5159c4288033208a69 419 Gene3D G3DSA:3.40.50.300 223 414 1.1E-47 T 11-10-2018 VSVS12_03815 a4cac2b45f871e5159c4288033208a69 419 Pfam PF00270 DEAD/DEAH box helicase 27 200 2.1E-49 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VSVS12_03815 a4cac2b45f871e5159c4288033208a69 419 SMART SM00487 22 226 4.3E-56 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VSVS12_03815 a4cac2b45f871e5159c4288033208a69 419 Pfam PF00271 Helicase conserved C-terminal domain 238 343 1.6E-28 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_03815 a4cac2b45f871e5159c4288033208a69 419 SMART SM00490 262 343 1.9E-32 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_03815 a4cac2b45f871e5159c4288033208a69 419 SUPERFAMILY SSF52540 78 364 6.35E-76 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02303 698bcb477049703d6948daece71fa376 351 Pfam PF14841 FliG middle domain 134 206 1.2E-25 T 11-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain VSVS12_02303 698bcb477049703d6948daece71fa376 351 Gene3D G3DSA:1.10.220.30 214 351 2.2E-42 T 11-10-2018 VSVS12_02303 698bcb477049703d6948daece71fa376 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 133 156 8.2E-57 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VSVS12_02303 698bcb477049703d6948daece71fa376 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 214 239 8.2E-57 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VSVS12_02303 698bcb477049703d6948daece71fa376 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 267 287 8.2E-57 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VSVS12_02303 698bcb477049703d6948daece71fa376 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 53 79 8.2E-57 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VSVS12_02303 698bcb477049703d6948daece71fa376 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 291 317 8.2E-57 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VSVS12_02303 698bcb477049703d6948daece71fa376 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 245 265 8.2E-57 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VSVS12_02303 698bcb477049703d6948daece71fa376 351 PRINTS PR00954 Flagellar motor switch protein FliG signature 24 40 8.2E-57 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VSVS12_02303 698bcb477049703d6948daece71fa376 351 Gene3D G3DSA:1.10.220.30 108 212 2.5E-28 T 11-10-2018 VSVS12_02303 698bcb477049703d6948daece71fa376 351 Pfam PF01706 FliG C-terminal domain 236 343 9.9E-40 T 11-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal VSVS12_02303 698bcb477049703d6948daece71fa376 351 Pfam PF14842 FliG N-terminal domain 25 124 3.8E-26 T 11-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain VSVS12_02303 698bcb477049703d6948daece71fa376 351 SUPERFAMILY SSF48029 25 135 3.14E-19 T 11-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical VSVS12_02303 698bcb477049703d6948daece71fa376 351 PIRSF PIRSF003161 19 351 5.6E-111 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VSVS12_02303 698bcb477049703d6948daece71fa376 351 SUPERFAMILY SSF48029 133 344 1.7E-66 T 11-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical VSVS12_02303 698bcb477049703d6948daece71fa376 351 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 20 349 3.8E-93 T 11-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 VSVS12_02303 698bcb477049703d6948daece71fa376 351 Gene3D G3DSA:1.10.220.30 19 103 7.0E-16 T 11-10-2018 VSVS12_04136 23d6de5c0ba6db1d9b40ee5c6d1bfd5c 400 Pfam PF01238 Phosphomannose isomerase type I 11 363 2.0E-85 T 11-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VSVS12_04136 23d6de5c0ba6db1d9b40ee5c6d1bfd5c 400 PRINTS PR00714 Phosphomannose isomerase type I signature 90 111 3.0E-68 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VSVS12_04136 23d6de5c0ba6db1d9b40ee5c6d1bfd5c 400 PRINTS PR00714 Phosphomannose isomerase type I signature 41 56 3.0E-68 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VSVS12_04136 23d6de5c0ba6db1d9b40ee5c6d1bfd5c 400 PRINTS PR00714 Phosphomannose isomerase type I signature 231 246 3.0E-68 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VSVS12_04136 23d6de5c0ba6db1d9b40ee5c6d1bfd5c 400 PRINTS PR00714 Phosphomannose isomerase type I signature 266 285 3.0E-68 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VSVS12_04136 23d6de5c0ba6db1d9b40ee5c6d1bfd5c 400 PRINTS PR00714 Phosphomannose isomerase type I signature 135 158 3.0E-68 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VSVS12_04136 23d6de5c0ba6db1d9b40ee5c6d1bfd5c 400 PRINTS PR00714 Phosphomannose isomerase type I signature 285 304 3.0E-68 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VSVS12_04136 23d6de5c0ba6db1d9b40ee5c6d1bfd5c 400 PRINTS PR00714 Phosphomannose isomerase type I signature 13 31 3.0E-68 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VSVS12_04136 23d6de5c0ba6db1d9b40ee5c6d1bfd5c 400 PRINTS PR00714 Phosphomannose isomerase type I signature 247 266 3.0E-68 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VSVS12_04136 23d6de5c0ba6db1d9b40ee5c6d1bfd5c 400 Gene3D G3DSA:2.60.120.10 312 393 3.1E-129 T 11-10-2018 IPR014710 RmlC-like jelly roll fold VSVS12_04136 23d6de5c0ba6db1d9b40ee5c6d1bfd5c 400 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 10 393 2.1E-91 T 11-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VSVS12_04136 23d6de5c0ba6db1d9b40ee5c6d1bfd5c 400 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 135 143 - T 11-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VSVS12_04136 23d6de5c0ba6db1d9b40ee5c6d1bfd5c 400 SUPERFAMILY SSF51182 8 385 3.93E-104 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily VSVS12_04136 23d6de5c0ba6db1d9b40ee5c6d1bfd5c 400 Gene3D G3DSA:2.60.120.10 15 286 3.1E-129 T 11-10-2018 IPR014710 RmlC-like jelly roll fold VSVS12_04136 23d6de5c0ba6db1d9b40ee5c6d1bfd5c 400 PIRSF PIRSF001480 8 400 1.8E-106 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VSVS12_04136 23d6de5c0ba6db1d9b40ee5c6d1bfd5c 400 Gene3D G3DSA:1.10.441.10 159 311 3.1E-129 T 11-10-2018 VSVS12_04136 23d6de5c0ba6db1d9b40ee5c6d1bfd5c 400 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 266 291 - T 11-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VSVS12_01630 5fe7958dc7fbade355e4b2fa1be9aeb4 465 SUPERFAMILY SSF56954 1 447 3.01E-67 T 11-10-2018 VSVS12_01630 5fe7958dc7fbade355e4b2fa1be9aeb4 465 Gene3D G3DSA:1.20.1600.10 20 452 1.8E-62 T 11-10-2018 VSVS12_01630 5fe7958dc7fbade355e4b2fa1be9aeb4 465 Pfam PF02321 Outer membrane efflux protein 263 447 8.9E-27 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VSVS12_01630 5fe7958dc7fbade355e4b2fa1be9aeb4 465 Pfam PF02321 Outer membrane efflux protein 26 243 2.3E-20 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VSVS12_01215 0de0914f0466bfdc07cb2d348c3257e0 184 Gene3D G3DSA:2.160.10.10 1 184 6.4E-64 T 11-10-2018 VSVS12_01215 0de0914f0466bfdc07cb2d348c3257e0 184 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 128 162 3.4E-8 T 11-10-2018 IPR001451 Hexapeptide repeat VSVS12_01215 0de0914f0466bfdc07cb2d348c3257e0 184 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 72 104 6.9E-4 T 11-10-2018 IPR001451 Hexapeptide repeat VSVS12_01215 0de0914f0466bfdc07cb2d348c3257e0 184 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 136 164 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VSVS12_01215 0de0914f0466bfdc07cb2d348c3257e0 184 SMART SM01266 4 56 9.9E-10 T 11-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 VSVS12_01215 0de0914f0466bfdc07cb2d348c3257e0 184 Pfam PF12464 Maltose acetyltransferase 6 55 5.6E-5 T 11-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 VSVS12_01215 0de0914f0466bfdc07cb2d348c3257e0 184 SUPERFAMILY SSF51161 2 181 1.04E-43 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily VSVS12_02514 3e508b35c17852fcff143e2ae3949d00 427 Gene3D G3DSA:3.30.450.380 1 166 3.5E-41 T 11-10-2018 VSVS12_02514 3e508b35c17852fcff143e2ae3949d00 427 Gene3D G3DSA:3.40.50.300 168 414 1.5E-69 T 11-10-2018 VSVS12_02514 3e508b35c17852fcff143e2ae3949d00 427 SUPERFAMILY SSF52540 48 354 3.03E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02514 3e508b35c17852fcff143e2ae3949d00 427 Pfam PF00437 Type II/IV secretion system protein 71 347 9.5E-80 T 11-10-2018 IPR001482 Type II/IV secretion system protein VSVS12_02514 3e508b35c17852fcff143e2ae3949d00 427 SMART SM00382 195 349 5.4E-4 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_00503 4c6210379196ed79442e9f4c8b30aa0b 187 Pfam PF00027 Cyclic nucleotide-binding domain 30 112 7.8E-10 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain VSVS12_00503 4c6210379196ed79442e9f4c8b30aa0b 187 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 37 53 - T 11-10-2018 IPR018488 Cyclic nucleotide-binding, conserved site VSVS12_00503 4c6210379196ed79442e9f4c8b30aa0b 187 Gene3D G3DSA:2.60.120.10 3 140 1.4E-21 T 11-10-2018 IPR014710 RmlC-like jelly roll fold VSVS12_00503 4c6210379196ed79442e9f4c8b30aa0b 187 SUPERFAMILY SSF51206 15 137 1.57E-20 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like VSVS12_03768 8a7b24f6e39e0dbee4ecb611127203bb 213 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 187 5.2E-27 T 11-10-2018 VSVS12_03768 8a7b24f6e39e0dbee4ecb611127203bb 213 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 68 187 4.3E-16 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VSVS12_03768 8a7b24f6e39e0dbee4ecb611127203bb 213 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 132 148 2.4E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VSVS12_03768 8a7b24f6e39e0dbee4ecb611127203bb 213 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 150 170 2.4E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VSVS12_03768 8a7b24f6e39e0dbee4ecb611127203bb 213 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 100 113 2.4E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VSVS12_03768 8a7b24f6e39e0dbee4ecb611127203bb 213 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 2.4E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VSVS12_03768 8a7b24f6e39e0dbee4ecb611127203bb 213 Gene3D G3DSA:3.40.50.1000 7 188 2.7E-43 T 11-10-2018 IPR023214 HAD superfamily VSVS12_03768 8a7b24f6e39e0dbee4ecb611127203bb 213 SUPERFAMILY SSF56784 6 213 8.27E-43 T 11-10-2018 IPR036412 HAD-like superfamily VSVS12_03768 8a7b24f6e39e0dbee4ecb611127203bb 213 Gene3D G3DSA:1.10.150.240 19 86 2.7E-43 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VSVS12_00378 a90f6aab6858c63c1633e70337cda076 424 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 7 178 5.9E-31 T 11-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VSVS12_00378 a90f6aab6858c63c1633e70337cda076 424 Gene3D G3DSA:3.40.50.720 200 423 4.6E-55 T 11-10-2018 VSVS12_00378 a90f6aab6858c63c1633e70337cda076 424 SMART SM00984 317 417 5.4E-36 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VSVS12_00378 a90f6aab6858c63c1633e70337cda076 424 Gene3D G3DSA:3.40.50.720 2 197 6.3E-55 T 11-10-2018 VSVS12_00378 a90f6aab6858c63c1633e70337cda076 424 PIRSF PIRSF500136 1 424 2.1E-148 T 11-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 VSVS12_00378 a90f6aab6858c63c1633e70337cda076 424 SUPERFAMILY SSF51735 7 191 2.5E-43 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_00378 a90f6aab6858c63c1633e70337cda076 424 SUPERFAMILY SSF48179 201 291 2.04E-24 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VSVS12_00378 a90f6aab6858c63c1633e70337cda076 424 SUPERFAMILY SSF52413 300 416 1.96E-29 T 11-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 VSVS12_00378 a90f6aab6858c63c1633e70337cda076 424 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 202 290 8.9E-23 T 11-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VSVS12_00378 a90f6aab6858c63c1633e70337cda076 424 PIRSF PIRSF000124 6 422 8.6E-49 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 VSVS12_00378 a90f6aab6858c63c1633e70337cda076 424 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 7 410 1.3E-118 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 VSVS12_00378 a90f6aab6858c63c1633e70337cda076 424 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 317 415 5.2E-22 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VSVS12_01389 19ad3d527a900e1b0032783bb3a12b82 232 SMART SM00382 30 217 6.6E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_01389 19ad3d527a900e1b0032783bb3a12b82 232 SUPERFAMILY SSF52540 1 228 2.4E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01389 19ad3d527a900e1b0032783bb3a12b82 232 Gene3D G3DSA:3.40.50.300 1 231 3.5E-65 T 11-10-2018 VSVS12_01389 19ad3d527a900e1b0032783bb3a12b82 232 Pfam PF00005 ABC transporter 21 169 1.9E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_01389 19ad3d527a900e1b0032783bb3a12b82 232 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_00124 6dffe17ed4ed7e27dc50081656e5ee25 250 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 5 240 16.008 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VSVS12_00124 6dffe17ed4ed7e27dc50081656e5ee25 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 104 130 4.1E-51 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VSVS12_00124 6dffe17ed4ed7e27dc50081656e5ee25 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 9 36 4.1E-51 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VSVS12_00124 6dffe17ed4ed7e27dc50081656e5ee25 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 86 104 4.1E-51 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VSVS12_00124 6dffe17ed4ed7e27dc50081656e5ee25 250 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 155 183 4.1E-51 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VSVS12_00124 6dffe17ed4ed7e27dc50081656e5ee25 250 ProSitePatterns PS01218 TatC family signature. 155 174 - T 11-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site VSVS12_00124 6dffe17ed4ed7e27dc50081656e5ee25 250 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 10 227 2.8E-75 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VSVS12_00124 6dffe17ed4ed7e27dc50081656e5ee25 250 Pfam PF00902 Sec-independent protein translocase protein (TatC) 13 222 4.3E-66 T 11-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 VSVS12_01144 f009a78fa62f8f286cc863d1fa6d8a77 447 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 15 419 1.3E-83 T 11-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 VSVS12_01144 f009a78fa62f8f286cc863d1fa6d8a77 447 Pfam PF02378 Phosphotransferase system, EIIC 33 348 1.1E-43 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VSVS12_01144 f009a78fa62f8f286cc863d1fa6d8a77 447 PIRSF PIRSF006351 5 429 3.8E-111 T 11-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 VSVS12_00814 68b86872eed324b05f2071ebb423c1bf 428 Gene3D G3DSA:3.40.630.10 91 428 2.0E-106 T 11-10-2018 VSVS12_00814 68b86872eed324b05f2071ebb423c1bf 428 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 109 422 8.7E-102 T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VSVS12_00814 68b86872eed324b05f2071ebb423c1bf 428 Pfam PF12404 Peptidase 5 81 3.1E-30 T 11-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 VSVS12_00814 68b86872eed324b05f2071ebb423c1bf 428 PIRSF PIRSF036388 1 428 4.0E-220 T 11-10-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 VSVS12_00814 68b86872eed324b05f2071ebb423c1bf 428 PRINTS PR00481 Cytosol aminopeptidase signature 191 208 8.4E-46 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VSVS12_00814 68b86872eed324b05f2071ebb423c1bf 428 PRINTS PR00481 Cytosol aminopeptidase signature 300 315 8.4E-46 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VSVS12_00814 68b86872eed324b05f2071ebb423c1bf 428 PRINTS PR00481 Cytosol aminopeptidase signature 272 292 8.4E-46 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VSVS12_00814 68b86872eed324b05f2071ebb423c1bf 428 PRINTS PR00481 Cytosol aminopeptidase signature 250 271 8.4E-46 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VSVS12_00814 68b86872eed324b05f2071ebb423c1bf 428 PRINTS PR00481 Cytosol aminopeptidase signature 213 234 8.4E-46 T 11-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 VSVS12_00814 68b86872eed324b05f2071ebb423c1bf 428 SUPERFAMILY SSF53187 104 427 1.1E-99 T 11-10-2018 VSVS12_00814 68b86872eed324b05f2071ebb423c1bf 428 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 276 283 - T 11-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 VSVS12_03880 43ff6ee426719ca18a36bb0377461761 52 Pfam PF03701 Uncharacterised protein family (UPF0181) 1 47 7.2E-24 T 11-10-2018 IPR005371 Uncharacterised protein family UPF0181 VSVS12_03880 43ff6ee426719ca18a36bb0377461761 52 ProDom PD026807 UPF0181 YOAH YPTB1650 VV20310 VPA0916 VCA0569 YPO1774/Y2534/YP1619 PLU2693 VVA0806 PM0480 1 45 1.0E-10 T 11-10-2018 IPR005371 Uncharacterised protein family UPF0181 VSVS12_03683 e0865565baef88755263bd8e4849b0b0 388 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 49 200 1.4E-50 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VSVS12_03683 e0865565baef88755263bd8e4849b0b0 388 SUPERFAMILY SSF55068 36 213 5.23E-69 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VSVS12_03683 e0865565baef88755263bd8e4849b0b0 388 SUPERFAMILY SSF51316 246 387 4.97E-59 T 11-10-2018 IPR011057 Mss4-like superfamily VSVS12_03683 e0865565baef88755263bd8e4849b0b0 388 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 246 379 1.3E-59 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VSVS12_03683 e0865565baef88755263bd8e4849b0b0 388 Pfam PF01641 SelR domain 251 370 3.4E-45 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VSVS12_03683 e0865565baef88755263bd8e4849b0b0 388 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 48 207 35.114 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VSVS12_03683 e0865565baef88755263bd8e4849b0b0 388 Gene3D G3DSA:2.170.150.20 241 388 1.0E-55 T 11-10-2018 VSVS12_03683 e0865565baef88755263bd8e4849b0b0 388 Gene3D G3DSA:3.30.1060.10 19 207 7.5E-62 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VSVS12_03683 e0865565baef88755263bd8e4849b0b0 388 Pfam PF01625 Peptide methionine sulfoxide reductase 50 201 3.8E-56 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VSVS12_01665 ab597ce0f8dcbc57077be54682460d39 664 SMART SM00228 247 324 4.1E-9 T 11-10-2018 IPR001478 PDZ domain GO:0005515 VSVS12_01665 ab597ce0f8dcbc57077be54682460d39 664 Gene3D G3DSA:3.90.226.10 325 545 2.7E-57 T 11-10-2018 VSVS12_01665 ab597ce0f8dcbc57077be54682460d39 664 SMART SM00245 327 528 7.8E-63 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 VSVS12_01665 ab597ce0f8dcbc57077be54682460d39 664 SUPERFAMILY SSF52096 166 538 1.33E-72 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VSVS12_01665 ab597ce0f8dcbc57077be54682460d39 664 Gene3D G3DSA:2.30.42.10 237 321 9.4E-13 T 11-10-2018 VSVS12_01665 ab597ce0f8dcbc57077be54682460d39 664 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 241 321 1.9E-13 T 11-10-2018 IPR001478 PDZ domain GO:0005515 VSVS12_01665 ab597ce0f8dcbc57077be54682460d39 664 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 200 548 6.1E-113 T 11-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 VSVS12_01665 ab597ce0f8dcbc57077be54682460d39 664 SUPERFAMILY SSF50156 238 324 1.33E-11 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 VSVS12_01665 ab597ce0f8dcbc57077be54682460d39 664 Pfam PF03572 Peptidase family S41 357 526 4.4E-51 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 VSVS12_01665 ab597ce0f8dcbc57077be54682460d39 664 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 531 664 1.9E-38 T 11-10-2018 IPR020992 Tail specific protease, C-terminal VSVS12_02553 9d431d337dad8ee32ca958c8a421d4da 132 PRINTS PR00502 NUDIX hydrolase family signature 34 48 2.1E-9 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VSVS12_02553 9d431d337dad8ee32ca958c8a421d4da 132 PRINTS PR00502 NUDIX hydrolase family signature 48 63 2.1E-9 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VSVS12_02553 9d431d337dad8ee32ca958c8a421d4da 132 ProSitePatterns PS00893 Nudix box signature. 39 60 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VSVS12_02553 9d431d337dad8ee32ca958c8a421d4da 132 TIGRFAM TIGR00586 mutt: mutator mutT protein 1 127 3.9E-45 T 11-10-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 VSVS12_02553 9d431d337dad8ee32ca958c8a421d4da 132 Pfam PF00293 NUDIX domain 7 125 2.7E-20 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VSVS12_02553 9d431d337dad8ee32ca958c8a421d4da 132 Gene3D G3DSA:3.90.79.10 1 132 9.7E-42 T 11-10-2018 VSVS12_02553 9d431d337dad8ee32ca958c8a421d4da 132 SUPERFAMILY SSF55811 1 128 1.33E-34 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VSVS12_01279 9fda8f099f1251e5286cfa2d93333f58 93 TIGRFAM TIGR03902 rhom_GG_sort: rhombosortase 2 83 7.7E-28 T 11-10-2018 IPR023826 Rhomboid-like serine protease, proteobacteria VSVS12_01279 9fda8f099f1251e5286cfa2d93333f58 93 Gene3D G3DSA:1.20.1540.10 1 92 3.1E-7 T 11-10-2018 IPR035952 Rhomboid-like superfamily VSVS12_01279 9fda8f099f1251e5286cfa2d93333f58 93 Pfam PF01694 Rhomboid family 8 85 1.3E-6 T 11-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 VSVS12_01279 9fda8f099f1251e5286cfa2d93333f58 93 SUPERFAMILY SSF144091 6 85 5.75E-12 T 11-10-2018 VSVS12_01949 e395a95f73635f17c8d36dd8ba0b4521 312 Pfam PF13306 Leucine rich repeats (6 copies) 27 95 2.6E-7 T 11-10-2018 IPR026906 Leucine rich repeat 5 VSVS12_01949 e395a95f73635f17c8d36dd8ba0b4521 312 Gene3D G3DSA:3.80.10.10 8 128 3.0E-13 T 11-10-2018 IPR032675 Leucine-rich repeat domain superfamily VSVS12_03744 36d43050062921ab3c979a62b1ee7d07 168 Pfam PF12167 Arm DNA-binding domain 8 63 2.3E-5 T 11-10-2018 IPR022000 Min27-like integrase, DNA-binding domain VSVS12_03744 36d43050062921ab3c979a62b1ee7d07 168 Gene3D G3DSA:1.10.150.130 80 164 6.0E-7 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal VSVS12_03744 36d43050062921ab3c979a62b1ee7d07 168 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 81 133 8.8E-5 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VSVS12_03744 36d43050062921ab3c979a62b1ee7d07 168 SUPERFAMILY SSF56349 81 158 1.77E-5 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VSVS12_04274 34b04004d920cff2e8a42059ebc41d3b 374 SUPERFAMILY SSF55073 184 334 3.45E-32 T 11-10-2018 IPR029787 Nucleotide cyclase VSVS12_04274 34b04004d920cff2e8a42059ebc41d3b 374 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 177 331 2.3E-26 T 11-10-2018 IPR000160 GGDEF domain VSVS12_04274 34b04004d920cff2e8a42059ebc41d3b 374 Gene3D G3DSA:3.30.450.40 13 162 9.1E-6 T 11-10-2018 IPR029016 GAF-like domain superfamily VSVS12_04274 34b04004d920cff2e8a42059ebc41d3b 374 Gene3D G3DSA:3.30.70.270 173 347 1.1E-36 T 11-10-2018 VSVS12_04274 34b04004d920cff2e8a42059ebc41d3b 374 SMART SM00267 168 332 2.3E-26 T 11-10-2018 IPR000160 GGDEF domain VSVS12_04274 34b04004d920cff2e8a42059ebc41d3b 374 SUPERFAMILY SSF55781 24 165 7.85E-10 T 11-10-2018 VSVS12_04274 34b04004d920cff2e8a42059ebc41d3b 374 Pfam PF00990 Diguanylate cyclase, GGDEF domain 180 327 2.1E-27 T 11-10-2018 IPR000160 GGDEF domain VSVS12_00826 297bd248be6f923b8e471e93680d7d8c 406 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 32 406 48.024 T 11-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 VSVS12_00826 297bd248be6f923b8e471e93680d7d8c 406 PIRSF PIRSF037565 31 406 1.1E-164 T 11-10-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 VSVS12_00826 297bd248be6f923b8e471e93680d7d8c 406 Gene3D G3DSA:3.40.50.150 216 406 9.7E-47 T 11-10-2018 VSVS12_00826 297bd248be6f923b8e471e93680d7d8c 406 Gene3D G3DSA:3.40.50.150 38 211 6.0E-52 T 11-10-2018 VSVS12_00826 297bd248be6f923b8e471e93680d7d8c 406 Pfam PF05175 Methyltransferase small domain 230 403 4.3E-53 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 VSVS12_00826 297bd248be6f923b8e471e93680d7d8c 406 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 333 339 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VSVS12_00826 297bd248be6f923b8e471e93680d7d8c 406 SUPERFAMILY SSF53335 218 384 3.7E-28 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_02039 2557a4adbe8e4882d87f6014a1f7ac26 484 PIRSF PIRSF000850 100 251 0.4 T 11-10-2018 VSVS12_02039 2557a4adbe8e4882d87f6014a1f7ac26 484 PIRSF PIRSF000850 379 467 0.076 T 11-10-2018 VSVS12_02039 2557a4adbe8e4882d87f6014a1f7ac26 484 PIRSF PIRSF000850 294 375 0.021 T 11-10-2018 VSVS12_02039 2557a4adbe8e4882d87f6014a1f7ac26 484 Gene3D G3DSA:3.30.870.10 315 457 1.2E-24 T 11-10-2018 VSVS12_02039 2557a4adbe8e4882d87f6014a1f7ac26 484 Pfam PF13091 PLD-like domain 135 268 1.1E-15 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VSVS12_02039 2557a4adbe8e4882d87f6014a1f7ac26 484 Pfam PF13091 PLD-like domain 327 446 2.5E-26 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VSVS12_02039 2557a4adbe8e4882d87f6014a1f7ac26 484 Gene3D G3DSA:3.30.870.10 116 307 6.3E-37 T 11-10-2018 VSVS12_02039 2557a4adbe8e4882d87f6014a1f7ac26 484 SUPERFAMILY SSF56024 273 470 2.92E-46 T 11-10-2018 VSVS12_02039 2557a4adbe8e4882d87f6014a1f7ac26 484 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 484 49.706 T 11-10-2018 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 VSVS12_02039 2557a4adbe8e4882d87f6014a1f7ac26 484 SUPERFAMILY SSF56024 66 313 8.63E-50 T 11-10-2018 VSVS12_02039 2557a4adbe8e4882d87f6014a1f7ac26 484 SMART SM00155 219 246 7.0E-5 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 VSVS12_02039 2557a4adbe8e4882d87f6014a1f7ac26 484 SMART SM00155 397 424 2.2E-5 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 VSVS12_02039 2557a4adbe8e4882d87f6014a1f7ac26 484 Pfam PF13396 Phospholipase_D-nuclease N-terminal 23 59 3.7E-6 T 11-10-2018 IPR027379 Cardiolipin synthase N-terminal VSVS12_02039 2557a4adbe8e4882d87f6014a1f7ac26 484 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 10 484 8.1E-154 T 11-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 VSVS12_00413 4fdea878eb88d12fa4686f23f1ddbd61 127 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 1 127 26.956 T 11-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 VSVS12_00413 4fdea878eb88d12fa4686f23f1ddbd61 127 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 7 127 1.0E-58 T 11-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 VSVS12_00413 4fdea878eb88d12fa4686f23f1ddbd61 127 Gene3D G3DSA:1.20.1300.10 1 127 1.5E-47 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VSVS12_00413 4fdea878eb88d12fa4686f23f1ddbd61 127 Pfam PF02300 Fumarate reductase subunit C 2 127 4.1E-49 T 11-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 VSVS12_00413 4fdea878eb88d12fa4686f23f1ddbd61 127 PIRSF PIRSF000180 1 127 5.1E-56 T 11-10-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 VSVS12_00413 4fdea878eb88d12fa4686f23f1ddbd61 127 SUPERFAMILY SSF81343 1 127 2.88E-52 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VSVS12_02527 174a4a668ab4ecf8dc3355e5e2aa6045 459 SUPERFAMILY SSF54211 257 455 4.17E-43 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VSVS12_02527 174a4a668ab4ecf8dc3355e5e2aa6045 459 Hamap MF_01498 DNA repair protein RadA [radA]. 21 457 42.926 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 VSVS12_02527 174a4a668ab4ecf8dc3355e5e2aa6045 459 Gene3D G3DSA:3.30.230.10 311 458 2.8E-22 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VSVS12_02527 174a4a668ab4ecf8dc3355e5e2aa6045 459 SMART SM00382 93 246 4.7E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_02527 174a4a668ab4ecf8dc3355e5e2aa6045 459 Pfam PF13541 Subunit ChlI of Mg-chelatase 347 432 1.5E-9 T 11-10-2018 VSVS12_02527 174a4a668ab4ecf8dc3355e5e2aa6045 459 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 453 4.1E-224 T 11-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 VSVS12_02527 174a4a668ab4ecf8dc3355e5e2aa6045 459 PRINTS PR01874 DNA repair protein radA signature 10 34 1.4E-93 T 11-10-2018 VSVS12_02527 174a4a668ab4ecf8dc3355e5e2aa6045 459 PRINTS PR01874 DNA repair protein radA signature 85 113 1.4E-93 T 11-10-2018 VSVS12_02527 174a4a668ab4ecf8dc3355e5e2aa6045 459 PRINTS PR01874 DNA repair protein radA signature 176 200 1.4E-93 T 11-10-2018 VSVS12_02527 174a4a668ab4ecf8dc3355e5e2aa6045 459 PRINTS PR01874 DNA repair protein radA signature 215 243 1.4E-93 T 11-10-2018 VSVS12_02527 174a4a668ab4ecf8dc3355e5e2aa6045 459 PRINTS PR01874 DNA repair protein radA signature 324 347 1.4E-93 T 11-10-2018 VSVS12_02527 174a4a668ab4ecf8dc3355e5e2aa6045 459 PRINTS PR01874 DNA repair protein radA signature 126 143 1.4E-93 T 11-10-2018 VSVS12_02527 174a4a668ab4ecf8dc3355e5e2aa6045 459 PRINTS PR01874 DNA repair protein radA signature 250 276 1.4E-93 T 11-10-2018 VSVS12_02527 174a4a668ab4ecf8dc3355e5e2aa6045 459 Gene3D G3DSA:3.40.50.300 67 281 1.2E-38 T 11-10-2018 VSVS12_02527 174a4a668ab4ecf8dc3355e5e2aa6045 459 Pfam PF13481 AAA domain 81 224 2.1E-13 T 11-10-2018 VSVS12_02527 174a4a668ab4ecf8dc3355e5e2aa6045 459 SUPERFAMILY SSF52540 70 294 2.49E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02035 a12770de4182ca0449bf68ed7ea8df75 311 SUPERFAMILY SSF53335 4 286 2.29E-51 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_02035 a12770de4182ca0449bf68ed7ea8df75 311 Gene3D G3DSA:3.40.50.150 72 310 9.3E-42 T 11-10-2018 VSVS12_02035 a12770de4182ca0449bf68ed7ea8df75 311 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 25 310 1.6E-161 T 11-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 VSVS12_02368 473f2e63619ab119652edd75d70bc2fb 114 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 112 2.8E-32 T 11-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 VSVS12_02368 473f2e63619ab119652edd75d70bc2fb 114 SUPERFAMILY SSF81343 4 113 9.65E-24 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VSVS12_02368 473f2e63619ab119652edd75d70bc2fb 114 PIRSF PIRSF000169 1 114 2.8E-35 T 11-10-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 VSVS12_02368 473f2e63619ab119652edd75d70bc2fb 114 Gene3D G3DSA:1.20.1300.10 1 114 1.0E-26 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VSVS12_01496 8bed5f1f0143be8cfe7b67be2737de26 526 SUPERFAMILY SSF75304 55 523 6.41E-92 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 VSVS12_01496 8bed5f1f0143be8cfe7b67be2737de26 526 Gene3D G3DSA:3.90.1300.10 50 526 7.1E-110 T 11-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 VSVS12_01496 8bed5f1f0143be8cfe7b67be2737de26 526 Pfam PF01425 Amidase 73 504 2.3E-69 T 11-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 VSVS12_02935 8fb83e21324726ed448ef855e1959bd4 1400 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1366 0.0 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VSVS12_02935 8fb83e21324726ed448ef855e1959bd4 1400 SUPERFAMILY SSF64484 16 1363 0.0 T 11-10-2018 VSVS12_02935 8fb83e21324726ed448ef855e1959bd4 1400 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 395 4.5E-8 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VSVS12_02935 8fb83e21324726ed448ef855e1959bd4 1400 Pfam PF00623 RNA polymerase Rpb1, domain 2 389 485 1.9E-27 T 11-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VSVS12_02935 8fb83e21324726ed448ef855e1959bd4 1400 Gene3D G3DSA:2.40.50.100 948 1021 7.4E-24 T 11-10-2018 VSVS12_02935 8fb83e21324726ed448ef855e1959bd4 1400 Gene3D G3DSA:1.10.1790.20 1135 1313 4.4E-63 T 11-10-2018 VSVS12_02935 8fb83e21324726ed448ef855e1959bd4 1400 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 9.5E-88 T 11-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VSVS12_02935 8fb83e21324726ed448ef855e1959bd4 1400 Gene3D G3DSA:1.10.40.90 374 416 3.1E-22 T 11-10-2018 VSVS12_02935 8fb83e21324726ed448ef855e1959bd4 1400 Gene3D G3DSA:1.10.274.100 490 640 1.5E-40 T 11-10-2018 VSVS12_02935 8fb83e21324726ed448ef855e1959bd4 1400 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1314 5.8E-78 T 11-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VSVS12_02935 8fb83e21324726ed448ef855e1959bd4 1400 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 7.5E-28 T 11-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VSVS12_02935 8fb83e21324726ed448ef855e1959bd4 1400 Gene3D G3DSA:2.40.50.100 1022 1126 8.2E-29 T 11-10-2018 VSVS12_02935 8fb83e21324726ed448ef855e1959bd4 1400 SMART SM00663 235 514 1.1E-184 T 11-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VSVS12_02935 8fb83e21324726ed448ef855e1959bd4 1400 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1376 18.963 T 11-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VSVS12_02935 8fb83e21324726ed448ef855e1959bd4 1400 Gene3D G3DSA:1.10.150.390 1315 1376 6.6E-29 T 11-10-2018 VSVS12_02935 8fb83e21324726ed448ef855e1959bd4 1400 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 6.6E-19 T 11-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VSVS12_02935 8fb83e21324726ed448ef855e1959bd4 1400 Gene3D G3DSA:2.40.50.100 1151 1214 4.4E-63 T 11-10-2018 VSVS12_02935 8fb83e21324726ed448ef855e1959bd4 1400 Gene3D G3DSA:1.10.132.30 641 790 1.4E-65 T 11-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 VSVS12_02669 456b87dc2a20e4c4269a467f48c2e1d5 164 SUPERFAMILY SSF55021 79 162 2.29E-28 T 11-10-2018 VSVS12_02669 456b87dc2a20e4c4269a467f48c2e1d5 164 SUPERFAMILY SSF55021 2 74 3.44E-22 T 11-10-2018 VSVS12_02669 456b87dc2a20e4c4269a467f48c2e1d5 164 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 75 4.0E-35 T 11-10-2018 VSVS12_02669 456b87dc2a20e4c4269a467f48c2e1d5 164 Gene3D G3DSA:3.30.70.1150 80 157 1.5E-29 T 11-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal VSVS12_02669 456b87dc2a20e4c4269a467f48c2e1d5 164 Pfam PF10369 Small subunit of acetolactate synthase 84 158 4.1E-27 T 11-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 VSVS12_02669 456b87dc2a20e4c4269a467f48c2e1d5 164 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 159 3.3E-63 T 11-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 VSVS12_02669 456b87dc2a20e4c4269a467f48c2e1d5 164 Gene3D G3DSA:3.30.70.260 1 78 2.6E-32 T 11-10-2018 VSVS12_02669 456b87dc2a20e4c4269a467f48c2e1d5 164 Pfam PF13710 ACT domain 11 73 7.0E-17 T 11-10-2018 VSVS12_01369 3d217708b315a3ba2fcb75aad0722c40 249 Gene3D G3DSA:3.90.550.10 1 249 4.3E-96 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VSVS12_01369 3d217708b315a3ba2fcb75aad0722c40 249 Pfam PF02348 Cytidylyltransferase 5 220 2.5E-70 T 11-10-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 VSVS12_01369 3d217708b315a3ba2fcb75aad0722c40 249 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 247 46.76 T 11-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 VSVS12_01369 3d217708b315a3ba2fcb75aad0722c40 249 SUPERFAMILY SSF53448 1 248 2.3E-66 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VSVS12_01369 3d217708b315a3ba2fcb75aad0722c40 249 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 240 3.0E-118 T 11-10-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 VSVS12_03424 aee98b1549255d697d24373effa55d89 528 SUPERFAMILY SSF51445 3 459 8.81E-134 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily VSVS12_03424 aee98b1549255d697d24373effa55d89 528 SUPERFAMILY SSF51011 465 525 1.15E-7 T 11-10-2018 VSVS12_03424 aee98b1549255d697d24373effa55d89 528 SMART SM00642 12 401 6.2E-128 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VSVS12_03424 aee98b1549255d697d24373effa55d89 528 Gene3D G3DSA:3.20.20.80 4 454 7.6E-173 T 11-10-2018 VSVS12_03424 aee98b1549255d697d24373effa55d89 528 Gene3D G3DSA:2.60.40.1180 464 516 1.9E-5 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta VSVS12_03424 aee98b1549255d697d24373effa55d89 528 Pfam PF00128 Alpha amylase, catalytic domain 27 358 3.4E-99 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VSVS12_03424 aee98b1549255d697d24373effa55d89 528 Gene3D G3DSA:3.90.400.10 104 168 7.6E-173 T 11-10-2018 VSVS12_03424 aee98b1549255d697d24373effa55d89 528 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 470 504 0.003 T 11-10-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|MetaCyc: PWY-7900 VSVS12_00576 fdb4e23d86c6614fef277f3e89528225 238 PIRSF PIRSF004848 1 238 9.8E-76 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 VSVS12_00576 fdb4e23d86c6614fef277f3e89528225 238 SUPERFAMILY SSF51419 1 230 1.57E-77 T 11-10-2018 IPR029066 PLP-binding barrel VSVS12_00576 fdb4e23d86c6614fef277f3e89528225 238 Gene3D G3DSA:3.20.20.10 1 237 1.1E-85 T 11-10-2018 IPR029066 PLP-binding barrel VSVS12_00576 fdb4e23d86c6614fef277f3e89528225 238 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 80 94 - T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 VSVS12_00576 fdb4e23d86c6614fef277f3e89528225 238 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 6 231 34.023 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 VSVS12_00576 fdb4e23d86c6614fef277f3e89528225 238 Pfam PF01168 Alanine racemase, N-terminal domain 9 232 1.2E-31 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VSVS12_00576 fdb4e23d86c6614fef277f3e89528225 238 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 232 9.6E-86 T 11-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 VSVS12_02537 2602e1a616cfe72d581375bc7009d1f3 434 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 201 427 6.8E-72 T 11-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 VSVS12_02537 2602e1a616cfe72d581375bc7009d1f3 434 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 4.6E-27 T 11-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 VSVS12_02537 2602e1a616cfe72d581375bc7009d1f3 434 Pfam PF07670 Nucleoside recognition 99 195 7.3E-8 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VSVS12_02537 2602e1a616cfe72d581375bc7009d1f3 434 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 427 2.0E-152 T 11-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 VSVS12_03833 15ee19512b36ea4164f036c719eb464d 226 SUPERFAMILY SSF50630 91 222 4.69E-41 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily VSVS12_03833 15ee19512b36ea4164f036c719eb464d 226 Pfam PF05618 Putative ATP-dependant zinc protease 91 225 2.1E-46 T 11-10-2018 VSVS12_03833 15ee19512b36ea4164f036c719eb464d 226 Gene3D G3DSA:2.40.70.10 88 215 7.9E-41 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily VSVS12_03925 b366e7769f423a06c7dc62f6e6397e7d 189 SUPERFAMILY SSF101874 23 189 5.62E-48 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily VSVS12_03925 b366e7769f423a06c7dc62f6e6397e7d 189 Pfam PF04264 YceI-like domain 25 184 5.2E-34 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like VSVS12_03925 b366e7769f423a06c7dc62f6e6397e7d 189 Gene3D G3DSA:2.40.128.110 23 189 7.9E-48 T 11-10-2018 IPR036761 Lipid/polyisoprenoid-binding, YceI-like superfamily VSVS12_03925 b366e7769f423a06c7dc62f6e6397e7d 189 SMART SM00867 24 187 3.1E-61 T 11-10-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like VSVS12_02777 4132f9c37c4cf39eb62ed81bd03f9a8d 306 SUPERFAMILY SSF51261 47 305 2.72E-49 T 11-10-2018 IPR011055 Duplicated hybrid motif VSVS12_02777 4132f9c37c4cf39eb62ed81bd03f9a8d 306 Pfam PF01551 Peptidase family M23 207 301 2.6E-30 T 11-10-2018 IPR016047 Peptidase M23 VSVS12_02777 4132f9c37c4cf39eb62ed81bd03f9a8d 306 Pfam PF01476 LysM domain 48 90 3.1E-10 T 11-10-2018 IPR018392 LysM domain VSVS12_02777 4132f9c37c4cf39eb62ed81bd03f9a8d 306 Gene3D G3DSA:2.70.70.10 169 305 1.4E-35 T 11-10-2018 IPR011055 Duplicated hybrid motif VSVS12_02777 4132f9c37c4cf39eb62ed81bd03f9a8d 306 SMART SM00257 47 91 1.6E-9 T 11-10-2018 IPR018392 LysM domain VSVS12_02777 4132f9c37c4cf39eb62ed81bd03f9a8d 306 Gene3D G3DSA:3.10.350.10 45 90 3.2E-12 T 11-10-2018 IPR036779 LysM domain superfamily VSVS12_00706 db90547df74c090b8ecef4417c9f368b 327 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_00706 db90547df74c090b8ecef4417c9f368b 327 Pfam PF00005 ABC transporter 26 181 8.5E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_00706 db90547df74c090b8ecef4417c9f368b 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 6.2E-18 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VSVS12_00706 db90547df74c090b8ecef4417c9f368b 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 317 7.7E-24 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VSVS12_00706 db90547df74c090b8ecef4417c9f368b 327 SUPERFAMILY SSF52540 5 252 5.33E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00706 db90547df74c090b8ecef4417c9f368b 327 Gene3D G3DSA:3.40.50.300 3 326 2.9E-91 T 11-10-2018 VSVS12_00706 db90547df74c090b8ecef4417c9f368b 327 SMART SM00382 34 231 1.3E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_00283 7ad9e7cbd986d630244030ae39b68155 309 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 157 296 1.2E-52 T 11-10-2018 IPR012660 Thioesterase, putative VSVS12_00283 7ad9e7cbd986d630244030ae39b68155 309 Gene3D G3DSA:3.40.630.30 2 144 1.4E-28 T 11-10-2018 VSVS12_00283 7ad9e7cbd986d630244030ae39b68155 309 Pfam PF13673 Acetyltransferase (GNAT) domain 35 142 2.8E-12 T 11-10-2018 IPR000182 GNAT domain VSVS12_00283 7ad9e7cbd986d630244030ae39b68155 309 SUPERFAMILY SSF55729 2 167 3.6E-30 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_00283 7ad9e7cbd986d630244030ae39b68155 309 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 164 297 8.9E-46 T 11-10-2018 IPR012660 Thioesterase, putative VSVS12_00283 7ad9e7cbd986d630244030ae39b68155 309 Gene3D G3DSA:3.10.129.10 147 298 5.8E-46 T 11-10-2018 VSVS12_00283 7ad9e7cbd986d630244030ae39b68155 309 SUPERFAMILY SSF54637 154 296 5.6E-39 T 11-10-2018 IPR029069 HotDog domain superfamily VSVS12_00484 336fa6720e3e8fbb31535ca8cede067c 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 7.0E-25 T 11-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00484 336fa6720e3e8fbb31535ca8cede067c 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.58 T 11-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid VSVS12_00484 336fa6720e3e8fbb31535ca8cede067c 101 Gene3D G3DSA:4.10.830.10 40 101 6.6E-23 T 11-10-2018 VSVS12_00484 336fa6720e3e8fbb31535ca8cede067c 101 SUPERFAMILY SSF57716 2 101 4.28E-37 T 11-10-2018 VSVS12_00484 336fa6720e3e8fbb31535ca8cede067c 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 11-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00112 05cf18d543eeaa027eda581b1ec9d05d 83 Pfam PF04380 Membrane fusogenic activity 1 78 2.0E-27 T 11-10-2018 IPR007475 Membrane fusogenic activity VSVS12_03199 54c159dbf1d91c07bf85f7f36a9e6281 394 Pfam PF07690 Major Facilitator Superfamily 15 263 4.0E-38 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VSVS12_03199 54c159dbf1d91c07bf85f7f36a9e6281 394 Gene3D G3DSA:1.20.1720.10 10 383 2.2E-82 T 11-10-2018 VSVS12_03199 54c159dbf1d91c07bf85f7f36a9e6281 394 PRINTS PR01035 Tetracycline resistance protein signature 19 35 8.8E-5 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VSVS12_03199 54c159dbf1d91c07bf85f7f36a9e6281 394 PRINTS PR01035 Tetracycline resistance protein signature 303 323 8.8E-5 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VSVS12_03199 54c159dbf1d91c07bf85f7f36a9e6281 394 PRINTS PR01035 Tetracycline resistance protein signature 135 157 8.8E-5 T 11-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 VSVS12_03199 54c159dbf1d91c07bf85f7f36a9e6281 394 SUPERFAMILY SSF103473 8 384 4.84E-55 T 11-10-2018 IPR036259 MFS transporter superfamily VSVS12_00762 7cc3f51450f2b632d5b89057b0233d59 168 TIGRFAM TIGR00077 lspA: signal peptidase II 8 166 7.8E-50 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VSVS12_00762 7cc3f51450f2b632d5b89057b0233d59 168 ProSitePatterns PS00855 Signal peptidases II signature. 107 119 - T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VSVS12_00762 7cc3f51450f2b632d5b89057b0233d59 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 56 64 2.8E-18 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VSVS12_00762 7cc3f51450f2b632d5b89057b0233d59 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 104 119 2.8E-18 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VSVS12_00762 7cc3f51450f2b632d5b89057b0233d59 168 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 140 156 2.8E-18 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VSVS12_00762 7cc3f51450f2b632d5b89057b0233d59 168 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 8 165 17.055 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VSVS12_00762 7cc3f51450f2b632d5b89057b0233d59 168 Pfam PF01252 Signal peptidase (SPase) II 17 159 8.3E-38 T 11-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 VSVS12_02658 24042b3e396f669af0db2a8b528abc80 86 Gene3D G3DSA:1.10.150.250 1 86 1.2E-36 T 11-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily VSVS12_02658 24042b3e396f669af0db2a8b528abc80 86 SUPERFAMILY SSF109910 2 79 7.59E-26 T 11-10-2018 IPR036714 Flavinator of succinate dehydrogenase superfamily VSVS12_02658 24042b3e396f669af0db2a8b528abc80 86 Pfam PF03937 Flavinator of succinate dehydrogenase 7 77 1.8E-24 T 11-10-2018 IPR005631 Flavinator of succinate dehydrogenase VSVS12_00776 98842f77a2fbb9d0f9a6ad3bedd59bea 555 Pfam PF00005 ABC transporter 340 473 3.5E-24 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_00776 98842f77a2fbb9d0f9a6ad3bedd59bea 555 SMART SM00382 348 522 5.6E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_00776 98842f77a2fbb9d0f9a6ad3bedd59bea 555 SMART SM00382 31 236 8.6E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_00776 98842f77a2fbb9d0f9a6ad3bedd59bea 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 3 553 1.2E-292 T 11-10-2018 IPR022374 Energy-dependent translational throttle protein EttA GO:0045900 VSVS12_00776 98842f77a2fbb9d0f9a6ad3bedd59bea 555 Gene3D G3DSA:3.40.50.300 286 555 8.2E-76 T 11-10-2018 VSVS12_00776 98842f77a2fbb9d0f9a6ad3bedd59bea 555 SUPERFAMILY SSF52540 9 243 4.38E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00776 98842f77a2fbb9d0f9a6ad3bedd59bea 555 Gene3D G3DSA:3.40.50.300 1 285 1.3E-84 T 11-10-2018 VSVS12_00776 98842f77a2fbb9d0f9a6ad3bedd59bea 555 SUPERFAMILY SSF52540 304 520 1.31E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00776 98842f77a2fbb9d0f9a6ad3bedd59bea 555 Pfam PF12848 ABC transporter 230 306 7.0E-13 T 11-10-2018 IPR032781 ABC-transporter extension domain VSVS12_00776 98842f77a2fbb9d0f9a6ad3bedd59bea 555 Pfam PF00005 ABC transporter 22 191 4.6E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_00776 98842f77a2fbb9d0f9a6ad3bedd59bea 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_03725 f62cd47998d479de3449eb4d6a0dbe4f 663 SUPERFAMILY SSF58104 354 663 9.94E-70 T 11-10-2018 VSVS12_03725 f62cd47998d479de3449eb4d6a0dbe4f 663 SMART SM00304 334 386 2.7E-5 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_03725 f62cd47998d479de3449eb4d6a0dbe4f 663 Gene3D G3DSA:1.10.287.950 334 663 3.2E-70 T 11-10-2018 VSVS12_03725 f62cd47998d479de3449eb4d6a0dbe4f 663 SMART SM00283 401 662 3.6E-69 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_03725 f62cd47998d479de3449eb4d6a0dbe4f 663 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 473 630 1.6E-44 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_02170 884807b9698f3ffcdb35a6d0747837f7 721 Pfam PF11412 Disulphide bond corrector protein DsbC 72 176 5.5E-18 T 11-10-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain VSVS12_02170 884807b9698f3ffcdb35a6d0747837f7 721 Pfam PF13899 Thioredoxin-like 610 695 2.0E-11 T 11-10-2018 VSVS12_02170 884807b9698f3ffcdb35a6d0747837f7 721 Gene3D G3DSA:3.40.30.10 606 720 2.1E-9 T 11-10-2018 VSVS12_02170 884807b9698f3ffcdb35a6d0747837f7 721 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 330 532 2.0E-9 T 11-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 VSVS12_02170 884807b9698f3ffcdb35a6d0747837f7 721 SUPERFAMILY SSF52833 604 717 1.73E-13 T 11-10-2018 IPR036249 Thioredoxin-like superfamily VSVS12_02667 909d288939547041ebd06a3c112733fa 218 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 7.4E-59 T 11-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 VSVS12_02667 909d288939547041ebd06a3c112733fa 218 SUPERFAMILY SSF75445 127 198 1.23E-23 T 11-10-2018 VSVS12_02667 909d288939547041ebd06a3c112733fa 218 Gene3D G3DSA:3.30.70.260 125 196 6.6E-78 T 11-10-2018 VSVS12_02667 909d288939547041ebd06a3c112733fa 218 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 33.279 T 11-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 VSVS12_02667 909d288939547041ebd06a3c112733fa 218 Gene3D G3DSA:3.40.50.1360 7 207 6.6E-78 T 11-10-2018 VSVS12_02667 909d288939547041ebd06a3c112733fa 218 SUPERFAMILY SSF100950 1 146 3.3E-46 T 11-10-2018 IPR037171 NagB/RpiA transferase-like VSVS12_02667 909d288939547041ebd06a3c112733fa 218 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 214 6.4E-69 T 11-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 VSVS12_02773 c36582d2ea1bd2fed27a6ddaaa3d9e9e 459 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 33.848 T 11-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 VSVS12_02773 c36582d2ea1bd2fed27a6ddaaa3d9e9e 459 Gene3D G3DSA:1.20.120.140 4 305 1.6E-121 T 11-10-2018 VSVS12_02773 c36582d2ea1bd2fed27a6ddaaa3d9e9e 459 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 1.3E-73 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VSVS12_02773 c36582d2ea1bd2fed27a6ddaaa3d9e9e 459 SMART SM00963 1 86 1.2E-36 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VSVS12_02773 c36582d2ea1bd2fed27a6ddaaa3d9e9e 459 Pfam PF02978 Signal peptide binding domain 329 427 2.8E-33 T 11-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 VSVS12_02773 c36582d2ea1bd2fed27a6ddaaa3d9e9e 459 SUPERFAMILY SSF52540 42 353 3.45E-57 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02773 c36582d2ea1bd2fed27a6ddaaa3d9e9e 459 SMART SM00962 100 296 1.1E-113 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VSVS12_02773 c36582d2ea1bd2fed27a6ddaaa3d9e9e 459 Gene3D G3DSA:3.40.50.300 90 285 1.6E-121 T 11-10-2018 VSVS12_02773 c36582d2ea1bd2fed27a6ddaaa3d9e9e 459 SUPERFAMILY SSF47446 329 430 1.26E-37 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 VSVS12_02773 c36582d2ea1bd2fed27a6ddaaa3d9e9e 459 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VSVS12_02773 c36582d2ea1bd2fed27a6ddaaa3d9e9e 459 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 1.4E-177 T 11-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 VSVS12_02773 c36582d2ea1bd2fed27a6ddaaa3d9e9e 459 SMART SM00382 99 247 1.1E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_02773 c36582d2ea1bd2fed27a6ddaaa3d9e9e 459 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 6.1E-22 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VSVS12_02773 c36582d2ea1bd2fed27a6ddaaa3d9e9e 459 Gene3D G3DSA:1.10.260.30 328 452 8.7E-45 T 11-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 VSVS12_01232 d87230a791910ac4fe82326fc3ef87e4 519 Pfam PF01740 STAS domain 415 503 6.7E-7 T 11-10-2018 IPR002645 STAS domain VSVS12_01232 d87230a791910ac4fe82326fc3ef87e4 519 Gene3D G3DSA:3.30.750.24 407 499 2.4E-28 T 11-10-2018 IPR036513 STAS domain superfamily VSVS12_01232 d87230a791910ac4fe82326fc3ef87e4 519 Pfam PF00916 Sulfate permease family 13 374 1.2E-56 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 VSVS12_01232 d87230a791910ac4fe82326fc3ef87e4 519 SUPERFAMILY SSF52091 415 498 7.65E-11 T 11-10-2018 IPR036513 STAS domain superfamily VSVS12_01417 787d4801d0fd61224bad2f86f0382a63 288 Gene3D G3DSA:3.20.20.140 3 250 4.6E-81 T 11-10-2018 VSVS12_01417 787d4801d0fd61224bad2f86f0382a63 288 SUPERFAMILY SSF89550 1 275 4.9E-54 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 VSVS12_01417 787d4801d0fd61224bad2f86f0382a63 288 Pfam PF02811 PHP domain 4 219 3.8E-10 T 11-10-2018 IPR004013 PHP domain GO:0003824 VSVS12_01417 787d4801d0fd61224bad2f86f0382a63 288 Gene3D G3DSA:1.10.150.650 98 169 4.6E-81 T 11-10-2018 VSVS12_01417 787d4801d0fd61224bad2f86f0382a63 288 SMART SM00481 3 70 1.1E-16 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal VSVS12_02255 4fa990b3b08e85ec2846760e92b69fb9 295 Gene3D G3DSA:3.40.50.300 22 263 1.6E-58 T 11-10-2018 VSVS12_02255 4fa990b3b08e85ec2846760e92b69fb9 295 SUPERFAMILY SSF52540 22 282 6.1E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02255 4fa990b3b08e85ec2846760e92b69fb9 295 PIRSF PIRSF003092 6 288 7.0E-84 T 11-10-2018 IPR025501 ATP binding protein MinD VSVS12_02255 4fa990b3b08e85ec2846760e92b69fb9 295 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 22 261 2.8E-22 T 11-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 VSVS12_02193 e10c52ad805d2bf9a80c61f7f715b622 405 Gene3D G3DSA:3.90.550.10 2 286 3.1E-82 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VSVS12_02193 e10c52ad805d2bf9a80c61f7f715b622 405 SUPERFAMILY SSF51161 292 403 4.57E-15 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily VSVS12_02193 e10c52ad805d2bf9a80c61f7f715b622 405 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 193 203 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VSVS12_02193 e10c52ad805d2bf9a80c61f7f715b622 405 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 4 377 7.6E-151 T 11-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VSVS12_02193 e10c52ad805d2bf9a80c61f7f715b622 405 SUPERFAMILY SSF53448 4 358 6.57E-69 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VSVS12_02193 e10c52ad805d2bf9a80c61f7f715b622 405 Pfam PF00483 Nucleotidyl transferase 6 272 1.1E-61 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 VSVS12_02193 e10c52ad805d2bf9a80c61f7f715b622 405 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 403 47.992 T 11-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VSVS12_02193 e10c52ad805d2bf9a80c61f7f715b622 405 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VSVS12_02193 e10c52ad805d2bf9a80c61f7f715b622 405 Gene3D G3DSA:2.160.10.10 287 403 4.0E-32 T 11-10-2018 VSVS12_02193 e10c52ad805d2bf9a80c61f7f715b622 405 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 95 103 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VSVS12_02524 78390f3d4cac3b3116595107f2370f05 561 Pfam PF00501 AMP-binding enzyme 23 440 6.9E-88 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VSVS12_02524 78390f3d4cac3b3116595107f2370f05 561 ProSitePatterns PS00455 Putative AMP-binding domain signature. 182 193 - T 11-10-2018 IPR020845 AMP-binding, conserved site VSVS12_02524 78390f3d4cac3b3116595107f2370f05 561 SUPERFAMILY SSF56801 13 547 2.49E-109 T 11-10-2018 VSVS12_02524 78390f3d4cac3b3116595107f2370f05 561 Gene3D G3DSA:3.40.50.12780 8 436 3.6E-85 T 11-10-2018 VSVS12_03760 ebdbfa858110b2a3d114e3e8c74a700b 1238 Gene3D G3DSA:1.25.40.10 239 367 7.2E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_03760 ebdbfa858110b2a3d114e3e8c74a700b 1238 Gene3D G3DSA:1.25.40.10 369 675 7.5E-22 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_03760 ebdbfa858110b2a3d114e3e8c74a700b 1238 SMART SM00028 320 353 1.6E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_03760 ebdbfa858110b2a3d114e3e8c74a700b 1238 SMART SM00028 75 108 3.3 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_03760 ebdbfa858110b2a3d114e3e8c74a700b 1238 SMART SM00028 368 401 5.7E-4 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_03760 ebdbfa858110b2a3d114e3e8c74a700b 1238 SMART SM00028 402 435 0.0038 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_03760 ebdbfa858110b2a3d114e3e8c74a700b 1238 Pfam PF14559 Tetratricopeptide repeat 296 360 1.1E-7 T 11-10-2018 VSVS12_03760 ebdbfa858110b2a3d114e3e8c74a700b 1238 SUPERFAMILY SSF48452 64 462 2.66E-25 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_03760 ebdbfa858110b2a3d114e3e8c74a700b 1238 PRINTS PR01441 Cellulose synthase subunit C signature 512 532 1.6E-6 T 11-10-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 VSVS12_03760 ebdbfa858110b2a3d114e3e8c74a700b 1238 PRINTS PR01441 Cellulose synthase subunit C signature 83 103 1.6E-6 T 11-10-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 VSVS12_03760 ebdbfa858110b2a3d114e3e8c74a700b 1238 PRINTS PR01441 Cellulose synthase subunit C signature 1103 1127 1.6E-6 T 11-10-2018 IPR003921 Cellulose synthase, subunit C GO:0006011|GO:0016020 VSVS12_03760 ebdbfa858110b2a3d114e3e8c74a700b 1238 Pfam PF13414 TPR repeat 375 414 1.2E-7 T 11-10-2018 VSVS12_03760 ebdbfa858110b2a3d114e3e8c74a700b 1238 Pfam PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) 901 1219 1.7E-91 T 11-10-2018 IPR008410 Cellulose synthase operon C, C-terminal GO:0019867|GO:0030244 VSVS12_03760 ebdbfa858110b2a3d114e3e8c74a700b 1238 Gene3D G3DSA:1.25.40.10 36 188 8.5E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_01748 20001f3f87ebcd5230a51809b008a2f0 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 1.8E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_01748 20001f3f87ebcd5230a51809b008a2f0 295 SUPERFAMILY SSF53850 89 288 7.72E-29 T 11-10-2018 VSVS12_01748 20001f3f87ebcd5230a51809b008a2f0 295 Gene3D G3DSA:3.40.190.10 160 260 9.8E-26 T 11-10-2018 VSVS12_01748 20001f3f87ebcd5230a51809b008a2f0 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 7.0E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_01748 20001f3f87ebcd5230a51809b008a2f0 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 7.0E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_01748 20001f3f87ebcd5230a51809b008a2f0 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 7.0E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_01748 20001f3f87ebcd5230a51809b008a2f0 295 Pfam PF03466 LysR substrate binding domain 89 287 5.1E-28 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_01748 20001f3f87ebcd5230a51809b008a2f0 295 Gene3D G3DSA:1.10.10.10 1 82 2.1E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_01748 20001f3f87ebcd5230a51809b008a2f0 295 Gene3D G3DSA:3.40.190.10 89 281 9.8E-26 T 11-10-2018 VSVS12_01748 20001f3f87ebcd5230a51809b008a2f0 295 SUPERFAMILY SSF46785 1 107 1.69E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_00641 38d2acd2f838ddbe2e219014db336a59 268 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 11-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 VSVS12_00641 38d2acd2f838ddbe2e219014db336a59 268 SUPERFAMILY SSF53335 8 264 1.59E-79 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_00641 38d2acd2f838ddbe2e219014db336a59 268 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 10 263 5.5E-86 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 VSVS12_00641 38d2acd2f838ddbe2e219014db336a59 268 Gene3D G3DSA:1.10.8.100 200 266 1.5E-24 T 11-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 VSVS12_00641 38d2acd2f838ddbe2e219014db336a59 268 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 264 54.963 T 11-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 VSVS12_00641 38d2acd2f838ddbe2e219014db336a59 268 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 264 9.0E-75 T 11-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm VSVS12_00641 38d2acd2f838ddbe2e219014db336a59 268 SMART SM00650 25 197 1.8E-88 T 11-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 VSVS12_00641 38d2acd2f838ddbe2e219014db336a59 268 Gene3D G3DSA:3.40.50.150 1 198 3.8E-64 T 11-10-2018 VSVS12_02391 75074b191d030489a88b007fc374e70a 193 Gene3D G3DSA:3.30.1370.110 46 181 4.3E-42 T 11-10-2018 VSVS12_02391 75074b191d030489a88b007fc374e70a 193 SMART SM00463 92 175 7.6E-15 T 11-10-2018 IPR002625 Smr domain VSVS12_02391 75074b191d030489a88b007fc374e70a 193 Pfam PF01713 Smr domain 95 175 4.6E-20 T 11-10-2018 IPR002625 Smr domain VSVS12_02391 75074b191d030489a88b007fc374e70a 193 SUPERFAMILY SSF160443 93 175 2.48E-13 T 11-10-2018 IPR036063 Smr domain superfamily VSVS12_00661 856768e56b969752ac94fbac7ff4804c 180 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 27 167 2.9E-27 T 11-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 VSVS12_00661 856768e56b969752ac94fbac7ff4804c 180 SMART SM00644 16 167 3.1E-50 T 11-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 VSVS12_00661 856768e56b969752ac94fbac7ff4804c 180 Gene3D G3DSA:3.40.80.10 2 180 3.4E-55 T 11-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 VSVS12_00661 856768e56b969752ac94fbac7ff4804c 180 SUPERFAMILY SSF55846 2 179 5.76E-65 T 11-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 VSVS12_00489 fa2b6ea283a1d2ae93ee95c140b5adcb 58 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 9.1E-27 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00489 fa2b6ea283a1d2ae93ee95c140b5adcb 58 PIRSF PIRSF002211 1 58 1.3E-28 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00489 fa2b6ea283a1d2ae93ee95c140b5adcb 58 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 22.06 T 11-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00489 fa2b6ea283a1d2ae93ee95c140b5adcb 58 ProSitePatterns PS00634 Ribosomal protein L30 signature. 22 54 - T 11-10-2018 IPR018038 Ribosomal protein L30, conserved site VSVS12_00489 fa2b6ea283a1d2ae93ee95c140b5adcb 58 Gene3D G3DSA:3.30.1390.20 1 58 3.6E-28 T 11-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily VSVS12_00489 fa2b6ea283a1d2ae93ee95c140b5adcb 58 SUPERFAMILY SSF55129 1 58 1.83E-23 T 11-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily VSVS12_00489 fa2b6ea283a1d2ae93ee95c140b5adcb 58 Pfam PF00327 Ribosomal protein L30p/L7e 4 54 2.6E-21 T 11-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain VSVS12_00415 b8eecd128d5b18e98cc046483a36bf85 605 Gene3D G3DSA:3.50.50.60 7 409 3.7E-161 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_00415 b8eecd128d5b18e98cc046483a36bf85 605 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 11-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VSVS12_00415 b8eecd128d5b18e98cc046483a36bf85 605 SUPERFAMILY SSF51905 3 419 4.2E-73 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_00415 b8eecd128d5b18e98cc046483a36bf85 605 Gene3D G3DSA:3.90.700.10 237 363 3.7E-161 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VSVS12_00415 b8eecd128d5b18e98cc046483a36bf85 605 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 5.1E-236 T 11-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VSVS12_00415 b8eecd128d5b18e98cc046483a36bf85 605 Pfam PF00890 FAD binding domain 7 397 2.4E-113 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 VSVS12_00415 b8eecd128d5b18e98cc046483a36bf85 605 SUPERFAMILY SSF46977 444 582 2.35E-43 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VSVS12_00415 b8eecd128d5b18e98cc046483a36bf85 605 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 2.8E-37 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VSVS12_00415 b8eecd128d5b18e98cc046483a36bf85 605 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 4 582 0.0 T 11-10-2018 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 VSVS12_00415 b8eecd128d5b18e98cc046483a36bf85 605 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 8.5E-5 T 11-10-2018 VSVS12_00415 b8eecd128d5b18e98cc046483a36bf85 605 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 8.5E-5 T 11-10-2018 VSVS12_00415 b8eecd128d5b18e98cc046483a36bf85 605 Gene3D G3DSA:4.10.80.40 543 577 7.6E-18 T 11-10-2018 VSVS12_00415 b8eecd128d5b18e98cc046483a36bf85 605 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 4.3E-9 T 11-10-2018 VSVS12_00415 b8eecd128d5b18e98cc046483a36bf85 605 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 4.3E-9 T 11-10-2018 VSVS12_00415 b8eecd128d5b18e98cc046483a36bf85 605 SUPERFAMILY SSF56425 227 358 2.39E-41 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VSVS12_00415 b8eecd128d5b18e98cc046483a36bf85 605 PIRSF PIRSF000171 1 577 9.6E-45 T 11-10-2018 VSVS12_00415 b8eecd128d5b18e98cc046483a36bf85 605 Gene3D G3DSA:1.20.58.100 424 538 1.8E-34 T 11-10-2018 VSVS12_00324 8982ab8e813f9b4d8def6c82c5945445 213 Pfam PF00156 Phosphoribosyl transferase domain 43 161 2.3E-12 T 11-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 VSVS12_00324 8982ab8e813f9b4d8def6c82c5945445 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 1.8E-70 T 11-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VSVS12_00324 8982ab8e813f9b4d8def6c82c5945445 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 36.702 T 11-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 VSVS12_00324 8982ab8e813f9b4d8def6c82c5945445 213 SUPERFAMILY SSF53271 2 212 1.42E-50 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like VSVS12_00324 8982ab8e813f9b4d8def6c82c5945445 213 Gene3D G3DSA:3.40.50.2020 1 213 1.7E-80 T 11-10-2018 VSVS12_01281 8a1da9339efb84408b4d89116eec1ac0 438 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 24 436 3.5E-126 T 11-10-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 VSVS12_01281 8a1da9339efb84408b4d89116eec1ac0 438 Pfam PF01966 HD domain 62 147 1.1E-7 T 11-10-2018 IPR006674 HD domain VSVS12_01281 8a1da9339efb84408b4d89116eec1ac0 438 SMART SM00471 58 264 2.4E-7 T 11-10-2018 IPR003607 HD/PDEase domain VSVS12_01281 8a1da9339efb84408b4d89116eec1ac0 438 Hamap MF_01212 Deoxyguanosinetriphosphate triphosphohydrolase-like protein. 5 435 34.001 T 11-10-2018 IPR023023 dNTP triphosphohydrolase, type 2 GO:0016793 VSVS12_01281 8a1da9339efb84408b4d89116eec1ac0 438 SUPERFAMILY SSF109604 20 436 6.28E-77 T 11-10-2018 VSVS12_01281 8a1da9339efb84408b4d89116eec1ac0 438 Pfam PF13286 Phosphohydrolase-associated domain 342 433 8.3E-25 T 11-10-2018 IPR026875 Phosphohydrolase-associated domain VSVS12_04358 b4a712b2077f742d9a1b599415111771 545 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 39 519 1.2E-143 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VSVS12_02614 7c08912c7bcab851629f0de7a31672c1 302 Gene3D G3DSA:1.25.40.10 23 293 4.0E-80 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_02614 7c08912c7bcab851629f0de7a31672c1 302 PIRSF PIRSF004654 1 293 4.6E-85 T 11-10-2018 IPR023605 Lipoprotein NlpI VSVS12_02614 7c08912c7bcab851629f0de7a31672c1 302 SMART SM00028 98 131 0.0011 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_02614 7c08912c7bcab851629f0de7a31672c1 302 SMART SM00028 132 165 68.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_02614 7c08912c7bcab851629f0de7a31672c1 302 SMART SM00028 235 268 11.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_02614 7c08912c7bcab851629f0de7a31672c1 302 SMART SM00028 64 97 0.057 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_02614 7c08912c7bcab851629f0de7a31672c1 302 SUPERFAMILY SSF48452 32 281 5.69E-67 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_00149 3325c9974fe0a1ebde75fce5bcd56107 141 SUPERFAMILY SSF52402 3 139 6.61E-33 T 11-10-2018 VSVS12_00149 3325c9974fe0a1ebde75fce5bcd56107 141 Gene3D G3DSA:3.40.50.620 2 141 4.3E-48 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VSVS12_00149 3325c9974fe0a1ebde75fce5bcd56107 141 Pfam PF00582 Universal stress protein family 3 138 2.8E-20 T 11-10-2018 IPR006016 UspA VSVS12_00149 3325c9974fe0a1ebde75fce5bcd56107 141 PIRSF PIRSF006276 1 141 6.5E-54 T 11-10-2018 IPR006015 Universal stress protein A VSVS12_01806 f5af93fe65a3f438f39ceec17de907f9 457 SMART SM00387 343 457 1.2E-22 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_01806 f5af93fe65a3f438f39ceec17de907f9 457 SMART SM00304 178 233 2.2E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_01806 f5af93fe65a3f438f39ceec17de907f9 457 Gene3D G3DSA:3.30.450.170 40 150 1.4E-8 T 11-10-2018 IPR038428 2-component histidine kinase, sensor domain superfamily VSVS12_01806 f5af93fe65a3f438f39ceec17de907f9 457 Gene3D G3DSA:3.30.565.10 302 457 6.6E-28 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_01806 f5af93fe65a3f438f39ceec17de907f9 457 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 344 456 2.4E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_01806 f5af93fe65a3f438f39ceec17de907f9 457 SUPERFAMILY SSF55874 288 456 1.05E-32 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_01806 f5af93fe65a3f438f39ceec17de907f9 457 Pfam PF16750 Sensor domain of 2-component histidine kinase 49 149 1.3E-28 T 11-10-2018 IPR031930 2-component histidine kinase, sensor domain VSVS12_01806 f5af93fe65a3f438f39ceec17de907f9 457 Gene3D G3DSA:1.10.287.130 182 299 2.1E-25 T 11-10-2018 VSVS12_01806 f5af93fe65a3f438f39ceec17de907f9 457 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 297 7.8E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_01806 f5af93fe65a3f438f39ceec17de907f9 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 384 398 1.2E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_01806 f5af93fe65a3f438f39ceec17de907f9 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 402 412 1.2E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_01806 f5af93fe65a3f438f39ceec17de907f9 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 419 437 1.2E-9 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_01806 f5af93fe65a3f438f39ceec17de907f9 457 SMART SM00388 234 298 6.0E-13 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_01806 f5af93fe65a3f438f39ceec17de907f9 457 SUPERFAMILY SSF47384 217 298 7.26E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VSVS12_01806 f5af93fe65a3f438f39ceec17de907f9 457 SUPERFAMILY SSF158472 179 230 1.57E-5 T 11-10-2018 VSVS12_02444 0ed89e42465074357d658eed690fd8cc 76 SUPERFAMILY SSF161187 3 72 1.14E-24 T 11-10-2018 VSVS12_02444 0ed89e42465074357d658eed690fd8cc 76 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 6 70 2.0E-22 T 11-10-2018 IPR010807 Protein of unknown function DUF1407 VSVS12_02444 0ed89e42465074357d658eed690fd8cc 76 Gene3D G3DSA:2.10.290.10 2 73 8.8E-25 T 11-10-2018 IPR029037 YfgJ-like VSVS12_02444 0ed89e42465074357d658eed690fd8cc 76 Pfam PF07191 zinc-ribbons 5 70 2.9E-25 T 11-10-2018 IPR010807 Protein of unknown function DUF1407 VSVS12_00740 2dc4709101393344d53af0879ebb57d9 1515 Pfam PF04898 Glutamate synthase central domain 472 756 7.6E-116 T 11-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 VSVS12_00740 2dc4709101393344d53af0879ebb57d9 1515 Gene3D G3DSA:3.20.20.70 498 1204 0.0 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_00740 2dc4709101393344d53af0879ebb57d9 1515 Gene3D G3DSA:2.160.20.60 1239 1510 7.6E-109 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 VSVS12_00740 2dc4709101393344d53af0879ebb57d9 1515 Pfam PF01493 GXGXG motif 1267 1452 1.4E-83 T 11-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 VSVS12_00740 2dc4709101393344d53af0879ebb57d9 1515 SUPERFAMILY SSF51395 451 1221 6.51E-266 T 11-10-2018 VSVS12_00740 2dc4709101393344d53af0879ebb57d9 1515 Gene3D G3DSA:3.20.20.70 448 815 0.0 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_00740 2dc4709101393344d53af0879ebb57d9 1515 Pfam PF00310 Glutamine amidotransferases class-II 21 443 2.0E-184 T 11-10-2018 IPR017932 Glutamine amidotransferase type 2 domain VSVS12_00740 2dc4709101393344d53af0879ebb57d9 1515 Pfam PF01645 Conserved region in glutamate synthase 817 1187 1.5E-150 T 11-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 VSVS12_00740 2dc4709101393344d53af0879ebb57d9 1515 SUPERFAMILY SSF69336 1236 1497 5.23E-96 T 11-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 VSVS12_00740 2dc4709101393344d53af0879ebb57d9 1515 Gene3D G3DSA:3.60.20.10 21 560 0.0 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VSVS12_00740 2dc4709101393344d53af0879ebb57d9 1515 SUPERFAMILY SSF56235 21 447 4.32E-152 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VSVS12_02411 bcfbddc98f8c229e265f1d43b253db7e 382 Gene3D G3DSA:2.10.230.10 139 212 3.7E-25 T 11-10-2018 VSVS12_02411 bcfbddc98f8c229e265f1d43b253db7e 382 Pfam PF00684 DnaJ central domain 150 210 8.8E-15 T 11-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 VSVS12_02411 bcfbddc98f8c229e265f1d43b253db7e 382 Gene3D G3DSA:1.10.287.110 1 115 3.5E-36 T 11-10-2018 IPR036869 Chaperone J-domain superfamily VSVS12_02411 bcfbddc98f8c229e265f1d43b253db7e 382 SUPERFAMILY SSF57938 137 213 6.02E-23 T 11-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily VSVS12_02411 bcfbddc98f8c229e265f1d43b253db7e 382 Pfam PF00226 DnaJ domain 5 67 6.3E-27 T 11-10-2018 IPR001623 DnaJ domain VSVS12_02411 bcfbddc98f8c229e265f1d43b253db7e 382 SUPERFAMILY SSF49493 262 347 4.71E-23 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 VSVS12_02411 bcfbddc98f8c229e265f1d43b253db7e 382 Gene3D G3DSA:2.60.260.20 258 366 1.2E-28 T 11-10-2018 VSVS12_02411 bcfbddc98f8c229e265f1d43b253db7e 382 SUPERFAMILY SSF49493 117 269 1.96E-20 T 11-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 VSVS12_02411 bcfbddc98f8c229e265f1d43b253db7e 382 SUPERFAMILY SSF46565 1 112 6.67E-36 T 11-10-2018 IPR036869 Chaperone J-domain superfamily VSVS12_02411 bcfbddc98f8c229e265f1d43b253db7e 382 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 376 42.761 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 VSVS12_02411 bcfbddc98f8c229e265f1d43b253db7e 382 Pfam PF01556 DnaJ C terminal domain 124 336 3.6E-45 T 11-10-2018 IPR002939 Chaperone DnaJ, C-terminal VSVS12_02411 bcfbddc98f8c229e265f1d43b253db7e 382 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 352 3.7E-141 T 11-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 VSVS12_02411 bcfbddc98f8c229e265f1d43b253db7e 382 SMART SM00271 4 62 3.8E-29 T 11-10-2018 IPR001623 DnaJ domain VSVS12_02411 bcfbddc98f8c229e265f1d43b253db7e 382 PRINTS PR00625 DnaJ domain signature 25 40 3.5E-32 T 11-10-2018 IPR001623 DnaJ domain VSVS12_02411 bcfbddc98f8c229e265f1d43b253db7e 382 PRINTS PR00625 DnaJ domain signature 7 25 3.5E-32 T 11-10-2018 IPR001623 DnaJ domain VSVS12_02411 bcfbddc98f8c229e265f1d43b253db7e 382 PRINTS PR00625 DnaJ domain signature 42 62 3.5E-32 T 11-10-2018 IPR001623 DnaJ domain VSVS12_02411 bcfbddc98f8c229e265f1d43b253db7e 382 PRINTS PR00625 DnaJ domain signature 62 81 3.5E-32 T 11-10-2018 IPR001623 DnaJ domain VSVS12_02411 bcfbddc98f8c229e265f1d43b253db7e 382 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 11-10-2018 IPR018253 DnaJ domain, conserved site VSVS12_03588 d2b9426f6734bc1dfc7d0d2ba5e1eea6 262 Gene3D G3DSA:3.40.1010.10 20 137 7.5E-44 T 11-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 VSVS12_03588 d2b9426f6734bc1dfc7d0d2ba5e1eea6 262 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 22 255 3.2E-94 T 11-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VSVS12_03588 d2b9426f6734bc1dfc7d0d2ba5e1eea6 262 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 25 233 8.9E-48 T 11-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 VSVS12_03588 d2b9426f6734bc1dfc7d0d2ba5e1eea6 262 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 27 41 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VSVS12_03588 d2b9426f6734bc1dfc7d0d2ba5e1eea6 262 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 102 135 - T 11-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 VSVS12_03588 d2b9426f6734bc1dfc7d0d2ba5e1eea6 262 Gene3D G3DSA:3.30.950.10 138 262 1.1E-44 T 11-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 VSVS12_03588 d2b9426f6734bc1dfc7d0d2ba5e1eea6 262 SUPERFAMILY SSF53790 18 261 5.89E-80 T 11-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 VSVS12_03601 0a46a211f6607ea9eceb34c4d183d663 310 PIRSF PIRSF026649 3 306 6.5E-86 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VSVS12_03601 0a46a211f6607ea9eceb34c4d183d663 310 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 7 297 4.0E-89 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VSVS12_03601 0a46a211f6607ea9eceb34c4d183d663 310 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 7 306 2.4E-135 T 11-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 VSVS12_03601 0a46a211f6607ea9eceb34c4d183d663 310 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 5 306 46.74 T 11-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 VSVS12_01708 4bffaca0632eaee444e387f81dba363c 208 Gene3D G3DSA:1.10.3480.10 2 196 2.4E-42 T 11-10-2018 VSVS12_01708 4bffaca0632eaee444e387f81dba363c 208 Pfam PF02613 Nitrate reductase delta subunit 43 158 2.9E-29 T 11-10-2018 IPR020945 DMSO/Nitrate reductase chaperone VSVS12_01708 4bffaca0632eaee444e387f81dba363c 208 SUPERFAMILY SSF89155 6 189 1.44E-52 T 11-10-2018 IPR036411 TorD-like superfamily VSVS12_01098 c40d574bda2a0fbd7de4f37d573fb61b 470 SUPERFAMILY SSF118215 30 444 4.18E-84 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VSVS12_01098 c40d574bda2a0fbd7de4f37d573fb61b 470 PRINTS PR00173 Glutamate-aspartate symporter signature 185 207 9.0E-16 T 11-10-2018 VSVS12_01098 c40d574bda2a0fbd7de4f37d573fb61b 470 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 9.0E-16 T 11-10-2018 VSVS12_01098 c40d574bda2a0fbd7de4f37d573fb61b 470 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 9.0E-16 T 11-10-2018 VSVS12_01098 c40d574bda2a0fbd7de4f37d573fb61b 470 PRINTS PR00173 Glutamate-aspartate symporter signature 399 419 9.0E-16 T 11-10-2018 VSVS12_01098 c40d574bda2a0fbd7de4f37d573fb61b 470 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 9.0E-16 T 11-10-2018 VSVS12_01098 c40d574bda2a0fbd7de4f37d573fb61b 470 PRINTS PR00173 Glutamate-aspartate symporter signature 372 391 9.0E-16 T 11-10-2018 VSVS12_01098 c40d574bda2a0fbd7de4f37d573fb61b 470 Gene3D G3DSA:1.10.3860.10 21 462 2.4E-97 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VSVS12_01098 c40d574bda2a0fbd7de4f37d573fb61b 470 Pfam PF00375 Sodium:dicarboxylate symporter family 30 444 3.4E-91 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 VSVS12_00637 e76b3e9968456aee024a83a16bec0e82 157 Pfam PF12821 Threonine/Serine exporter, ThrE 13 147 7.9E-39 T 11-10-2018 IPR024528 Threonine/Serine exporter, ThrE VSVS12_03574 3988c97a2ed123a97602634926f1c451 426 Gene3D G3DSA:3.90.550.10 105 378 4.7E-14 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VSVS12_03574 3988c97a2ed123a97602634926f1c451 426 SUPERFAMILY SSF53448 127 339 1.0E-13 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VSVS12_02199 a45f05aba0ad954f0f589816ecef2e07 232 PIRSF PIRSF037208 1 232 6.6E-87 T 11-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 VSVS12_02199 a45f05aba0ad954f0f589816ecef2e07 232 Pfam PF04376 Arginine-tRNA-protein transferase, N terminus 16 86 9.6E-19 T 11-10-2018 IPR007471 N-end aminoacyl transferase, N-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 VSVS12_02199 a45f05aba0ad954f0f589816ecef2e07 232 Pfam PF04377 Arginine-tRNA-protein transferase, C terminus 105 225 8.7E-33 T 11-10-2018 IPR007472 N-end rule aminoacyl transferase, C-terminal GO:0004057|GO:0016598 MetaCyc: PWY-7802 VSVS12_02199 a45f05aba0ad954f0f589816ecef2e07 232 SUPERFAMILY SSF55729 80 231 1.74E-24 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_02199 a45f05aba0ad954f0f589816ecef2e07 232 Hamap MF_00689 Aspartate/glutamate leucyltransferase [bpt]. 6 231 38.007 T 11-10-2018 IPR017138 Aspartate/glutamate leucyltransferase GO:0008914|GO:0071596 MetaCyc: PWY-7802 VSVS12_02785 70d6e91093355701ca5003e9d7b8044d 161 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 129 7.8E-25 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VSVS12_02785 70d6e91093355701ca5003e9d7b8044d 161 SUPERFAMILY SSF55083 1 151 1.7E-37 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VSVS12_02785 70d6e91093355701ca5003e9d7b8044d 161 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 129 1.5E-28 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VSVS12_02785 70d6e91093355701ca5003e9d7b8044d 161 Gene3D G3DSA:3.30.70.560 2 153 1.3E-33 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VSVS12_00513 359c1142c579295061234418487768ca 69 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 1 64 1.3E-21 T 11-10-2018 IPR014318 Phage shock protein, PspG VSVS12_00513 359c1142c579295061234418487768ca 69 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 3 64 6.5E-19 T 11-10-2018 IPR014318 Phage shock protein, PspG VSVS12_03834 030d01dd863647ab0923c0c0fce0863a 157 SUPERFAMILY SSF54534 19 156 4.71E-50 T 11-10-2018 VSVS12_03834 030d01dd863647ab0923c0c0fce0863a 157 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 68 154 2.8E-27 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VSVS12_03834 030d01dd863647ab0923c0c0fce0863a 157 Gene3D G3DSA:3.10.50.40 20 157 1.6E-51 T 11-10-2018 VSVS12_03834 030d01dd863647ab0923c0c0fce0863a 157 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 24 59 2.2E-9 T 11-10-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 VSVS12_01968 f5b1cb556077aafe8776beb80fd435ce 496 Gene3D G3DSA:3.40.605.10 29 486 1.1E-145 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VSVS12_01968 f5b1cb556077aafe8776beb80fd435ce 496 Gene3D G3DSA:3.40.309.10 270 462 1.1E-145 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VSVS12_01968 f5b1cb556077aafe8776beb80fd435ce 496 Pfam PF00171 Aldehyde dehydrogenase family 32 490 1.0E-146 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VSVS12_01968 f5b1cb556077aafe8776beb80fd435ce 496 SUPERFAMILY SSF53720 13 494 7.2E-146 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VSVS12_01234 737ed1fe4fc3889bef793dad6eb6c001 314 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 141 155 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VSVS12_01234 737ed1fe4fc3889bef793dad6eb6c001 314 SUPERFAMILY SSF55174 19 71 2.36E-9 T 11-10-2018 VSVS12_01234 737ed1fe4fc3889bef793dad6eb6c001 314 Gene3D G3DSA:3.10.290.10 7 76 5.3E-16 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VSVS12_01234 737ed1fe4fc3889bef793dad6eb6c001 314 Pfam PF01479 S4 domain 20 66 9.7E-11 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_01234 737ed1fe4fc3889bef793dad6eb6c001 314 SUPERFAMILY SSF55120 92 308 2.56E-64 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VSVS12_01234 737ed1fe4fc3889bef793dad6eb6c001 314 Pfam PF00849 RNA pseudouridylate synthase 102 247 2.5E-31 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VSVS12_01234 737ed1fe4fc3889bef793dad6eb6c001 314 Gene3D G3DSA:3.30.2350.10 93 314 1.2E-78 T 11-10-2018 VSVS12_01234 737ed1fe4fc3889bef793dad6eb6c001 314 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 310 5.0E-90 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VSVS12_01234 737ed1fe4fc3889bef793dad6eb6c001 314 SMART SM00363 20 78 5.2E-9 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_02629 65a227312cb42f16d7272a712f4a7b9a 946 Gene3D G3DSA:1.10.4050.10 1 112 1.4E-9 T 11-10-2018 VSVS12_02629 65a227312cb42f16d7272a712f4a7b9a 946 Gene3D G3DSA:1.20.120.330 288 443 1.5E-55 T 11-10-2018 VSVS12_02629 65a227312cb42f16d7272a712f4a7b9a 946 Gene3D G3DSA:1.20.120.1510 450 563 1.2E-33 T 11-10-2018 VSVS12_02629 65a227312cb42f16d7272a712f4a7b9a 946 SUPERFAMILY SSF81301 18 289 8.5E-90 T 11-10-2018 VSVS12_02629 65a227312cb42f16d7272a712f4a7b9a 946 Gene3D G3DSA:3.30.460.100 564 813 8.9E-90 T 11-10-2018 VSVS12_02629 65a227312cb42f16d7272a712f4a7b9a 946 SUPERFAMILY SSF81593 290 439 7.61E-44 T 11-10-2018 VSVS12_02629 65a227312cb42f16d7272a712f4a7b9a 946 SUPERFAMILY SSF81593 817 945 2.12E-31 T 11-10-2018 VSVS12_02629 65a227312cb42f16d7272a712f4a7b9a 946 Gene3D G3DSA:3.30.460.10 115 287 5.9E-67 T 11-10-2018 VSVS12_02629 65a227312cb42f16d7272a712f4a7b9a 946 Gene3D G3DSA:1.20.120.330 814 946 1.2E-41 T 11-10-2018 VSVS12_02629 65a227312cb42f16d7272a712f4a7b9a 946 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 555 805 3.3E-96 T 11-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 VSVS12_02629 65a227312cb42f16d7272a712f4a7b9a 946 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 33 279 9.2E-95 T 11-10-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 VSVS12_02629 65a227312cb42f16d7272a712f4a7b9a 946 Pfam PF08335 GlnD PII-uridylyltransferase 300 439 1.8E-46 T 11-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 VSVS12_02629 65a227312cb42f16d7272a712f4a7b9a 946 Pfam PF08335 GlnD PII-uridylyltransferase 845 915 6.4E-7 T 11-10-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 VSVS12_02629 65a227312cb42f16d7272a712f4a7b9a 946 SUPERFAMILY SSF81301 527 817 4.39E-87 T 11-10-2018 VSVS12_02629 65a227312cb42f16d7272a712f4a7b9a 946 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 30 946 19.213 T 11-10-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 VSVS12_04478 12caf3d334085e5a8eedfb4f3db9a3a5 222 Pfam PF08900 Domain of unknown function (DUF1845) 15 219 6.3E-39 T 11-10-2018 IPR014996 Integrating conjugative element protein, PFL4669 VSVS12_04478 12caf3d334085e5a8eedfb4f3db9a3a5 222 TIGRFAM TIGR03761 ICE_PFL4669: integrating conjugative element protein, PFL_4669 family 16 221 2.1E-38 T 11-10-2018 IPR014996 Integrating conjugative element protein, PFL4669 VSVS12_02746 c04adb8e6a28ae9642824a8211febd67 592 SUPERFAMILY SSF89000 297 457 1.88E-50 T 11-10-2018 VSVS12_02746 c04adb8e6a28ae9642824a8211febd67 592 Gene3D G3DSA:3.20.20.70 1 462 3.0E-175 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_02746 c04adb8e6a28ae9642824a8211febd67 592 SUPERFAMILY SSF51230 516 591 8.64E-20 T 11-10-2018 IPR011053 Single hybrid motif VSVS12_02746 c04adb8e6a28ae9642824a8211febd67 592 Pfam PF00364 Biotin-requiring enzyme 526 590 1.8E-16 T 11-10-2018 IPR000089 Biotin/lipoyl attachment VSVS12_02746 c04adb8e6a28ae9642824a8211febd67 592 SUPERFAMILY SSF51569 1 300 2.2E-90 T 11-10-2018 VSVS12_02746 c04adb8e6a28ae9642824a8211febd67 592 TIGRFAM TIGR01108 oadA: oxaloacetate decarboxylase alpha subunit 7 586 1.8E-270 T 11-10-2018 IPR005776 Oxaloacetate decarboxylase, alpha subunit GO:0006814|GO:0008948 VSVS12_02746 c04adb8e6a28ae9642824a8211febd67 592 Pfam PF00682 HMGL-like 6 270 3.2E-60 T 11-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 VSVS12_02746 c04adb8e6a28ae9642824a8211febd67 592 Gene3D G3DSA:2.40.50.100 517 592 1.1E-21 T 11-10-2018 VSVS12_02746 c04adb8e6a28ae9642824a8211febd67 592 Pfam PF02436 Conserved carboxylase domain 292 492 1.3E-57 T 11-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 VSVS12_02746 c04adb8e6a28ae9642824a8211febd67 592 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 548 565 - T 11-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VSVS12_01869 3d643ba9b4966783ffefcbf4644f5783 102 Gene3D G3DSA:3.40.50.2300 1 102 1.3E-35 T 11-10-2018 VSVS12_01869 3d643ba9b4966783ffefcbf4644f5783 102 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 94 1.9E-23 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VSVS12_01869 3d643ba9b4966783ffefcbf4644f5783 102 SUPERFAMILY SSF52794 1 100 3.4E-34 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VSVS12_02270 e2fa666962a9fb752e4d06a419caabaa 504 Gene3D G3DSA:3.40.50.2020 276 440 1.5E-156 T 11-10-2018 VSVS12_02270 e2fa666962a9fb752e4d06a419caabaa 504 SUPERFAMILY SSF53271 249 481 3.8E-67 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like VSVS12_02270 e2fa666962a9fb752e4d06a419caabaa 504 Gene3D G3DSA:3.60.20.10 2 411 1.5E-156 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VSVS12_02270 e2fa666962a9fb752e4d06a419caabaa 504 SUPERFAMILY SSF56235 2 256 4.37E-69 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VSVS12_02270 e2fa666962a9fb752e4d06a419caabaa 504 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 463 44.51 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 VSVS12_02270 e2fa666962a9fb752e4d06a419caabaa 504 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 463 5.7E-162 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 VSVS12_02270 e2fa666962a9fb752e4d06a419caabaa 504 PIRSF PIRSF000485 1 480 4.0E-166 T 11-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 VSVS12_02270 e2fa666962a9fb752e4d06a419caabaa 504 Pfam PF13522 Glutamine amidotransferase domain 63 207 7.5E-17 T 11-10-2018 VSVS12_01799 7c03e65e66c7d37fa28c604db81cf2f8 399 Gene3D G3DSA:1.25.40.10 183 311 3.6E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_01799 7c03e65e66c7d37fa28c604db81cf2f8 399 SUPERFAMILY SSF48452 39 242 5.07E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_01799 7c03e65e66c7d37fa28c604db81cf2f8 399 SUPERFAMILY SSF48452 268 390 9.36E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_01799 7c03e65e66c7d37fa28c604db81cf2f8 399 Gene3D G3DSA:1.25.40.10 312 396 2.9E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_01799 7c03e65e66c7d37fa28c604db81cf2f8 399 Gene3D G3DSA:1.25.40.10 37 182 4.0E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_01275 2c84c0e8681c8a30c75c57155e0a0b9e 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 11-10-2018 IPR019844 Cold-shock conserved site VSVS12_01275 2c84c0e8681c8a30c75c57155e0a0b9e 70 PRINTS PR00050 Cold shock protein signature 28 37 6.9E-18 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VSVS12_01275 2c84c0e8681c8a30c75c57155e0a0b9e 70 PRINTS PR00050 Cold shock protein signature 43 61 6.9E-18 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VSVS12_01275 2c84c0e8681c8a30c75c57155e0a0b9e 70 PRINTS PR00050 Cold shock protein signature 7 22 6.9E-18 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VSVS12_01275 2c84c0e8681c8a30c75c57155e0a0b9e 70 Gene3D G3DSA:2.40.50.140 2 70 1.3E-30 T 11-10-2018 VSVS12_01275 2c84c0e8681c8a30c75c57155e0a0b9e 70 PIRSF PIRSF002599 1 70 4.6E-26 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 VSVS12_01275 2c84c0e8681c8a30c75c57155e0a0b9e 70 SMART SM00357 6 70 4.8E-31 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 VSVS12_01275 2c84c0e8681c8a30c75c57155e0a0b9e 70 Pfam PF00313 'Cold-shock' DNA-binding domain 6 69 3.3E-31 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VSVS12_01275 2c84c0e8681c8a30c75c57155e0a0b9e 70 SUPERFAMILY SSF50249 4 69 6.43E-26 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_01427 3de4533fcf0d0d987c8b7204edf1c30d 166 Pfam PF04664 Opioid growth factor receptor (OGFr) conserved region 27 146 6.7E-15 T 11-10-2018 IPR006757 Opioid growth factor receptor (OGFr) conserved domain GO:0016020|GO:0038023 VSVS12_04215 692074f90eb3c10b7cc45833e8fa77b0 211 Gene3D G3DSA:1.10.357.10 1 210 2.9E-57 T 11-10-2018 VSVS12_04215 692074f90eb3c10b7cc45833e8fa77b0 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 63 9.8E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VSVS12_04215 692074f90eb3c10b7cc45833e8fa77b0 211 SUPERFAMILY SSF46689 8 81 8.72E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_04215 692074f90eb3c10b7cc45833e8fa77b0 211 SUPERFAMILY SSF48498 92 207 2.49E-6 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VSVS12_04215 692074f90eb3c10b7cc45833e8fa77b0 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 2.5E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VSVS12_04215 692074f90eb3c10b7cc45833e8fa77b0 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 2.5E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VSVS12_00213 bddf4266225a4aec06a6221bc78ffedf 688 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 686 26.096 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VSVS12_00213 bddf4266225a4aec06a6221bc78ffedf 688 SUPERFAMILY SSF109604 347 488 1.16E-12 T 11-10-2018 VSVS12_00213 bddf4266225a4aec06a6221bc78ffedf 688 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 687 8.3E-297 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VSVS12_00213 bddf4266225a4aec06a6221bc78ffedf 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 49 61 3.2E-37 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VSVS12_00213 bddf4266225a4aec06a6221bc78ffedf 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 245 260 3.2E-37 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VSVS12_00213 bddf4266225a4aec06a6221bc78ffedf 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 317 333 3.2E-37 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VSVS12_00213 bddf4266225a4aec06a6221bc78ffedf 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 3.2E-37 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VSVS12_00213 bddf4266225a4aec06a6221bc78ffedf 688 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 3.2E-37 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VSVS12_00213 bddf4266225a4aec06a6221bc78ffedf 688 Pfam PF05746 DALR anticodon binding domain 580 677 7.9E-10 T 11-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 VSVS12_00213 bddf4266225a4aec06a6221bc78ffedf 688 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 549 3.1E-206 T 11-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VSVS12_03721 17bbf00a882d92a84eeac2c36b121727 524 Pfam PF14785 Maltose transport system permease protein MalF P2 domain 110 270 7.3E-58 T 11-10-2018 IPR029345 Maltose transport system permease protein MalF, P2 domain VSVS12_03721 17bbf00a882d92a84eeac2c36b121727 524 SUPERFAMILY SSF160964 24 270 1.57E-79 T 11-10-2018 VSVS12_03721 17bbf00a882d92a84eeac2c36b121727 524 SUPERFAMILY SSF161098 273 513 1.16E-55 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_03721 17bbf00a882d92a84eeac2c36b121727 524 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 307 512 2.0E-15 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VSVS12_03721 17bbf00a882d92a84eeac2c36b121727 524 Gene3D G3DSA:1.10.3720.10 280 522 1.5E-66 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_03721 17bbf00a882d92a84eeac2c36b121727 524 Gene3D G3DSA:1.20.58.370 18 105 1.6E-31 T 11-10-2018 IPR035277 MalF, N-terminal VSVS12_03721 17bbf00a882d92a84eeac2c36b121727 524 Gene3D G3DSA:2.40.430.10 128 214 7.2E-53 T 11-10-2018 VSVS12_03721 17bbf00a882d92a84eeac2c36b121727 524 Gene3D G3DSA:3.10.650.10 108 278 7.2E-53 T 11-10-2018 VSVS12_00581 f07c75d533e4e4453501f00146d6cae2 589 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 390 576 1.6E-60 T 11-10-2018 IPR021797 Virulence factor membrane-bound polymerase, C-terminal VSVS12_00581 f07c75d533e4e4453501f00146d6cae2 589 Pfam PF15864 Protein glycosylation ligase 174 199 1.1E-11 T 11-10-2018 IPR031726 Protein glycosylation ligase domain VSVS12_00581 f07c75d533e4e4453501f00146d6cae2 589 Pfam PF04932 O-Antigen ligase 221 367 7.4E-17 T 11-10-2018 IPR007016 O-antigen ligase-related VSVS12_00771 ade32d9ed04fcc6e2744d20d1e3a4339 557 Pfam PF13492 GAF domain 241 351 1.8E-6 T 11-10-2018 IPR003018 GAF domain GO:0005515 VSVS12_00771 ade32d9ed04fcc6e2744d20d1e3a4339 557 Gene3D G3DSA:3.30.450.40 227 352 7.2E-6 T 11-10-2018 IPR029016 GAF-like domain superfamily VSVS12_00771 ade32d9ed04fcc6e2744d20d1e3a4339 557 SUPERFAMILY SSF55781 227 351 4.91E-9 T 11-10-2018 VSVS12_00771 ade32d9ed04fcc6e2744d20d1e3a4339 557 Gene3D G3DSA:3.30.565.10 419 556 2.1E-10 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_00771 ade32d9ed04fcc6e2744d20d1e3a4339 557 Pfam PF07694 5TMR of 5TMR-LYT 25 194 4.3E-59 T 11-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 VSVS12_00771 ade32d9ed04fcc6e2744d20d1e3a4339 557 SUPERFAMILY SSF55874 420 553 7.89E-10 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_00771 ade32d9ed04fcc6e2744d20d1e3a4339 557 Pfam PF06580 Histidine kinase 366 444 2.3E-26 T 11-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 VSVS12_01620 f177a3760dce89b9bb1fd80cc4fc2cb4 75 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 11-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 VSVS12_01620 f177a3760dce89b9bb1fd80cc4fc2cb4 75 Gene3D G3DSA:3.40.30.10 3 75 2.8E-14 T 11-10-2018 VSVS12_01620 f177a3760dce89b9bb1fd80cc4fc2cb4 75 Pfam PF00462 Glutaredoxin 5 59 2.0E-9 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VSVS12_01620 f177a3760dce89b9bb1fd80cc4fc2cb4 75 SUPERFAMILY SSF52833 3 70 1.91E-13 T 11-10-2018 IPR036249 Thioredoxin-like superfamily VSVS12_00185 b11382e834f326a483280f9bcaf0d34f 140 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 4 132 20.257 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VSVS12_00185 b11382e834f326a483280f9bcaf0d34f 140 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 134 1.5E-11 T 11-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain VSVS12_00185 b11382e834f326a483280f9bcaf0d34f 140 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 85 3.4E-28 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VSVS12_00185 b11382e834f326a483280f9bcaf0d34f 140 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 11 91 8.0E-37 T 11-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VSVS12_00185 b11382e834f326a483280f9bcaf0d34f 140 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 6 134 3.1E-42 T 11-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VSVS12_00185 b11382e834f326a483280f9bcaf0d34f 140 Gene3D G3DSA:2.60.15.10 4 91 6.1E-29 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VSVS12_00185 b11382e834f326a483280f9bcaf0d34f 140 SUPERFAMILY SSF46604 89 138 1.73E-14 T 11-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VSVS12_00185 b11382e834f326a483280f9bcaf0d34f 140 SUPERFAMILY SSF51344 6 87 1.7E-23 T 11-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VSVS12_00185 b11382e834f326a483280f9bcaf0d34f 140 Gene3D G3DSA:1.20.5.440 92 135 1.8E-19 T 11-10-2018 VSVS12_02409 ffde776e896f93391d80afd96c36e39d 169 SUPERFAMILY SSF54523 5 99 2.04E-12 T 11-10-2018 VSVS12_02409 ffde776e896f93391d80afd96c36e39d 169 Gene3D G3DSA:3.30.700.10 5 140 1.4E-8 T 11-10-2018 VSVS12_02409 ffde776e896f93391d80afd96c36e39d 169 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 3 23 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_02409 ffde776e896f93391d80afd96c36e39d 169 Pfam PF12019 Type II transport protein GspH 41 148 7.0E-9 T 11-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 VSVS12_02409 ffde776e896f93391d80afd96c36e39d 169 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 3 24 4.0E-5 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_02409 ffde776e896f93391d80afd96c36e39d 169 PIRSF PIRSF024622 1 169 3.3E-56 T 11-10-2018 IPR016824 Tfp pilus assembly protein FimT VSVS12_02906 aab9687d25fcbf95caab956bf2732f91 315 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 8 301 29.167 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 VSVS12_02906 aab9687d25fcbf95caab956bf2732f91 315 Gene3D G3DSA:1.10.20.140 115 186 5.6E-105 T 11-10-2018 VSVS12_02906 aab9687d25fcbf95caab956bf2732f91 315 SUPERFAMILY SSF52540 10 152 3.54E-18 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02906 aab9687d25fcbf95caab956bf2732f91 315 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 9 295 3.3E-113 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 VSVS12_02906 aab9687d25fcbf95caab956bf2732f91 315 Gene3D G3DSA:3.40.50.300 12 292 5.6E-105 T 11-10-2018 VSVS12_02906 aab9687d25fcbf95caab956bf2732f91 315 Pfam PF01715 IPP transferase 42 286 4.6E-83 T 11-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 VSVS12_03320 fcaf8aef0262fdd8884d3021faa72f11 152 Pfam PF02579 Dinitrogenase iron-molybdenum cofactor 9 92 8.7E-13 T 11-10-2018 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis VSVS12_03320 fcaf8aef0262fdd8884d3021faa72f11 152 SUPERFAMILY SSF53146 1 90 2.62E-18 T 11-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily VSVS12_03320 fcaf8aef0262fdd8884d3021faa72f11 152 Gene3D G3DSA:3.30.420.130 1 99 1.6E-14 T 11-10-2018 IPR036105 Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily VSVS12_02191 6d95e0247b124eb0c04085b0cc3397c7 267 Pfam PF00561 alpha/beta hydrolase fold 19 121 6.1E-23 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VSVS12_02191 6d95e0247b124eb0c04085b0cc3397c7 267 SUPERFAMILY SSF53474 12 260 7.72E-47 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold VSVS12_02191 6d95e0247b124eb0c04085b0cc3397c7 267 Gene3D G3DSA:3.40.50.1820 5 263 2.4E-43 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold VSVS12_02191 6d95e0247b124eb0c04085b0cc3397c7 267 PRINTS PR00412 Epoxide hydrolase signature 205 221 1.7E-5 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VSVS12_02191 6d95e0247b124eb0c04085b0cc3397c7 267 PRINTS PR00412 Epoxide hydrolase signature 24 42 1.7E-5 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VSVS12_02191 6d95e0247b124eb0c04085b0cc3397c7 267 PRINTS PR00412 Epoxide hydrolase signature 237 259 1.7E-5 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VSVS12_03140 5005679403cdaed7ec874696a01a89a9 383 SUPERFAMILY SSF117281 44 363 8.89E-28 T 11-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 VSVS12_03140 5005679403cdaed7ec874696a01a89a9 383 Gene3D G3DSA:2.120.10.80 16 185 2.5E-14 T 11-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 VSVS12_03140 5005679403cdaed7ec874696a01a89a9 383 TIGRFAM TIGR03547 muta_rot_YjhT: mutatrotase, YjhT family 27 375 1.7E-135 T 11-10-2018 IPR019936 Mutatrotase, YjhT-like VSVS12_03140 5005679403cdaed7ec874696a01a89a9 383 Gene3D G3DSA:2.120.10.80 186 377 2.4E-12 T 11-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 VSVS12_03140 5005679403cdaed7ec874696a01a89a9 383 Pfam PF01344 Kelch motif 80 128 1.2E-7 T 11-10-2018 IPR006652 Kelch repeat type 1 GO:0005515 VSVS12_03176 2ce9b610ee9d79245de84898158a01bc 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 418 447 7.8E-24 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VSVS12_03176 2ce9b610ee9d79245de84898158a01bc 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 389 416 7.8E-24 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VSVS12_03176 2ce9b610ee9d79245de84898158a01bc 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 12 37 7.8E-24 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VSVS12_03176 2ce9b610ee9d79245de84898158a01bc 553 Pfam PF17200 Single Cache domain 2 48 188 6.4E-28 T 11-10-2018 IPR033480 Single Cache domain 2 VSVS12_03176 2ce9b610ee9d79245de84898158a01bc 553 Gene3D G3DSA:1.10.287.950 221 553 7.6E-69 T 11-10-2018 VSVS12_03176 2ce9b610ee9d79245de84898158a01bc 553 SMART SM00283 291 552 4.0E-72 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_03176 2ce9b610ee9d79245de84898158a01bc 553 SMART SM00304 222 276 7.8E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_03176 2ce9b610ee9d79245de84898158a01bc 553 SUPERFAMILY SSF58104 244 553 1.29E-73 T 11-10-2018 VSVS12_03176 2ce9b610ee9d79245de84898158a01bc 553 SMART SM01049 44 130 8.9E-22 T 11-10-2018 IPR033480 Single Cache domain 2 VSVS12_03176 2ce9b610ee9d79245de84898158a01bc 553 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 335 514 1.1E-40 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_03176 2ce9b610ee9d79245de84898158a01bc 553 Gene3D G3DSA:3.30.450.20 30 201 2.2E-35 T 11-10-2018 VSVS12_02339 553784a82388107d7724520b4a2596c6 259 SUPERFAMILY SSF47807 164 257 2.99E-21 T 11-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily VSVS12_02339 553784a82388107d7724520b4a2596c6 259 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 165 258 7.1E-24 T 11-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 VSVS12_02339 553784a82388107d7724520b4a2596c6 259 Hamap MF_01192 Flap endonuclease Xni [xni]. 2 255 45.719 T 11-10-2018 IPR022895 Flap endonuclease Xni GO:0048256 VSVS12_02339 553784a82388107d7724520b4a2596c6 259 SMART SM00279 167 202 8.2E-8 T 11-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 VSVS12_02339 553784a82388107d7724520b4a2596c6 259 SMART SM00475 3 254 6.3E-65 T 11-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 VSVS12_02339 553784a82388107d7724520b4a2596c6 259 Gene3D G3DSA:1.10.150.20 167 254 5.2E-22 T 11-10-2018 VSVS12_02339 553784a82388107d7724520b4a2596c6 259 SUPERFAMILY SSF88723 4 164 8.34E-39 T 11-10-2018 IPR029060 PIN-like domain superfamily VSVS12_02339 553784a82388107d7724520b4a2596c6 259 Gene3D G3DSA:3.40.50.1010 1 166 1.8E-51 T 11-10-2018 VSVS12_02339 553784a82388107d7724520b4a2596c6 259 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 155 2.2E-30 T 11-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 VSVS12_02268 9f36b598225725ad6bd24356d648e5de 262 Gene3D G3DSA:3.40.50.300 1 243 2.2E-56 T 11-10-2018 VSVS12_02268 9f36b598225725ad6bd24356d648e5de 262 Pfam PF00005 ABC transporter 20 148 8.4E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_02268 9f36b598225725ad6bd24356d648e5de 262 SMART SM00382 29 199 2.2E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_02268 9f36b598225725ad6bd24356d648e5de 262 SUPERFAMILY SSF52540 4 228 6.25E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01422 2ea0150423b32402f93bf30131a83a4c 508 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 403 505 3.5E-12 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_01422 2ea0150423b32402f93bf30131a83a4c 508 SMART SM00387 402 508 4.9E-15 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_01422 2ea0150423b32402f93bf30131a83a4c 508 SUPERFAMILY SSF52172 14 134 5.27E-35 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_01422 2ea0150423b32402f93bf30131a83a4c 508 SUPERFAMILY SSF52172 158 292 2.42E-36 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_01422 2ea0150423b32402f93bf30131a83a4c 508 SUPERFAMILY SSF47384 285 358 2.75E-7 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VSVS12_01422 2ea0150423b32402f93bf30131a83a4c 508 Gene3D G3DSA:1.10.287.130 307 354 6.5E-31 T 11-10-2018 VSVS12_01422 2ea0150423b32402f93bf30131a83a4c 508 Gene3D G3DSA:3.40.50.2300 141 304 6.2E-36 T 11-10-2018 VSVS12_01422 2ea0150423b32402f93bf30131a83a4c 508 Gene3D G3DSA:3.40.50.2300 8 134 1.7E-34 T 11-10-2018 VSVS12_01422 2ea0150423b32402f93bf30131a83a4c 508 Pfam PF00072 Response regulator receiver domain 18 130 2.8E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_01422 2ea0150423b32402f93bf30131a83a4c 508 Pfam PF00072 Response regulator receiver domain 161 272 1.3E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_01422 2ea0150423b32402f93bf30131a83a4c 508 SMART SM00448 16 130 3.1E-33 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_01422 2ea0150423b32402f93bf30131a83a4c 508 SMART SM00448 159 272 5.4E-37 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_01422 2ea0150423b32402f93bf30131a83a4c 508 SUPERFAMILY SSF55874 350 504 5.89E-24 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_01422 2ea0150423b32402f93bf30131a83a4c 508 Gene3D G3DSA:3.30.565.10 355 503 6.5E-31 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_01505 636b2662290d4523c5cf8d2a66e58920 314 Gene3D G3DSA:3.30.450.20 11 146 3.8E-5 T 11-10-2018 VSVS12_01505 636b2662290d4523c5cf8d2a66e58920 314 SUPERFAMILY SSF55073 158 312 2.67E-39 T 11-10-2018 IPR029787 Nucleotide cyclase VSVS12_01505 636b2662290d4523c5cf8d2a66e58920 314 Gene3D G3DSA:3.30.70.270 147 314 4.2E-46 T 11-10-2018 VSVS12_01505 636b2662290d4523c5cf8d2a66e58920 314 SMART SM00267 142 314 5.3E-47 T 11-10-2018 IPR000160 GGDEF domain VSVS12_01505 636b2662290d4523c5cf8d2a66e58920 314 Pfam PF00990 Diguanylate cyclase, GGDEF domain 153 309 4.0E-39 T 11-10-2018 IPR000160 GGDEF domain VSVS12_01505 636b2662290d4523c5cf8d2a66e58920 314 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 151 312 6.7E-39 T 11-10-2018 IPR000160 GGDEF domain VSVS12_03791 3ef3e9565d1382fa66bf228b6b40d40f 430 Gene3D G3DSA:3.20.20.80 24 423 2.8E-118 T 11-10-2018 VSVS12_03791 3ef3e9565d1382fa66bf228b6b40d40f 430 SUPERFAMILY SSF54556 313 387 4.43E-18 T 11-10-2018 IPR029070 Chitinase insertion domain superfamily VSVS12_03791 3ef3e9565d1382fa66bf228b6b40d40f 430 Gene3D G3DSA:3.10.50.10 312 390 2.8E-118 T 11-10-2018 IPR029070 Chitinase insertion domain superfamily VSVS12_03791 3ef3e9565d1382fa66bf228b6b40d40f 430 SMART SM00636 23 416 7.3E-105 T 11-10-2018 IPR011583 Chitinase II GO:0008061 VSVS12_03791 3ef3e9565d1382fa66bf228b6b40d40f 430 Pfam PF00704 Glycosyl hydrolases family 18 25 416 1.6E-78 T 11-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 VSVS12_03791 3ef3e9565d1382fa66bf228b6b40d40f 430 SUPERFAMILY SSF51445 15 418 1.11E-74 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily VSVS12_03791 3ef3e9565d1382fa66bf228b6b40d40f 430 ProSitePatterns PS01095 Chitinases family 18 active site. 169 177 - T 11-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 VSVS12_02960 3f2736d93c2efa2850c3ccb5908023a4 302 SUPERFAMILY SSF161111 8 207 3.4E-51 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily VSVS12_02960 3f2736d93c2efa2850c3ccb5908023a4 302 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 287 2.3E-24 T 11-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain VSVS12_02960 3f2736d93c2efa2850c3ccb5908023a4 302 SUPERFAMILY SSF160240 210 288 4.58E-23 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 VSVS12_02960 3f2736d93c2efa2850c3ccb5908023a4 302 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 12 287 1.5E-68 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VSVS12_02960 3f2736d93c2efa2850c3ccb5908023a4 302 Gene3D G3DSA:3.30.70.1350 207 290 2.2E-29 T 11-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 VSVS12_02960 3f2736d93c2efa2850c3ccb5908023a4 302 Gene3D G3DSA:1.20.1510.10 8 206 9.8E-61 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily VSVS12_02960 3f2736d93c2efa2850c3ccb5908023a4 302 Pfam PF01545 Cation efflux family 14 206 3.7E-43 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VSVS12_02011 98f6dc0e92e21b66160eefba3b810b15 214 SUPERFAMILY SSF52172 3 132 9.25E-34 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_02011 98f6dc0e92e21b66160eefba3b810b15 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 203 4.4E-18 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_02011 98f6dc0e92e21b66160eefba3b810b15 214 Gene3D G3DSA:3.40.50.12740 2 209 2.4E-59 T 11-10-2018 VSVS12_02011 98f6dc0e92e21b66160eefba3b810b15 214 SMART SM00421 146 203 1.2E-16 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_02011 98f6dc0e92e21b66160eefba3b810b15 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_02011 98f6dc0e92e21b66160eefba3b810b15 214 SUPERFAMILY SSF46894 135 210 1.5E-18 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VSVS12_02011 98f6dc0e92e21b66160eefba3b810b15 214 SMART SM00448 2 115 2.8E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_02011 98f6dc0e92e21b66160eefba3b810b15 214 Pfam PF00072 Response regulator receiver domain 4 116 3.3E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_02011 98f6dc0e92e21b66160eefba3b810b15 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 1.6E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_02011 98f6dc0e92e21b66160eefba3b810b15 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 1.6E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_02011 98f6dc0e92e21b66160eefba3b810b15 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 1.6E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_03490 5d20ca7d17ce36881615a98c26e0a674 385 SMART SM00267 180 360 2.1E-51 T 11-10-2018 IPR000160 GGDEF domain VSVS12_03490 5d20ca7d17ce36881615a98c26e0a674 385 SUPERFAMILY SSF55073 196 361 5.02E-45 T 11-10-2018 IPR029787 Nucleotide cyclase VSVS12_03490 5d20ca7d17ce36881615a98c26e0a674 385 Gene3D G3DSA:3.30.70.270 186 369 5.7E-51 T 11-10-2018 VSVS12_03490 5d20ca7d17ce36881615a98c26e0a674 385 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 188 359 1.9E-42 T 11-10-2018 IPR000160 GGDEF domain VSVS12_03490 5d20ca7d17ce36881615a98c26e0a674 385 Pfam PF00990 Diguanylate cyclase, GGDEF domain 191 356 2.8E-43 T 11-10-2018 IPR000160 GGDEF domain VSVS12_00625 a91fbef5cd9330ccf27b57e7c6a8d4e0 132 Pfam PF09834 Predicted membrane protein (DUF2061) 1 52 3.3E-20 T 11-10-2018 IPR018638 Domain of unknown function DUF2061, membrane VSVS12_00625 a91fbef5cd9330ccf27b57e7c6a8d4e0 132 Pfam PF09834 Predicted membrane protein (DUF2061) 66 115 2.4E-20 T 11-10-2018 IPR018638 Domain of unknown function DUF2061, membrane VSVS12_04219 a1936dfefe6b197833b4b426ba0cbe59 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 5 348 1.6E-167 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VSVS12_04219 a1936dfefe6b197833b4b426ba0cbe59 350 Pfam PF00793 DAHP synthetase I family 40 337 2.9E-103 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VSVS12_04219 a1936dfefe6b197833b4b426ba0cbe59 350 SUPERFAMILY SSF51569 6 347 1.15E-137 T 11-10-2018 VSVS12_04219 a1936dfefe6b197833b4b426ba0cbe59 350 PIRSF PIRSF001361 1 350 1.4E-161 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VSVS12_04219 a1936dfefe6b197833b4b426ba0cbe59 350 Gene3D G3DSA:3.20.20.70 1 349 5.1E-165 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_01164 e65e5b895b60004ba8770cdcf3dd2843 286 SUPERFAMILY SSF47616 132 278 3.96E-33 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VSVS12_01164 e65e5b895b60004ba8770cdcf3dd2843 286 Pfam PF02798 Glutathione S-transferase, N-terminal domain 64 126 4.6E-6 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VSVS12_01164 e65e5b895b60004ba8770cdcf3dd2843 286 SUPERFAMILY SSF52833 38 133 3.07E-16 T 11-10-2018 IPR036249 Thioredoxin-like superfamily VSVS12_01164 e65e5b895b60004ba8770cdcf3dd2843 286 Gene3D G3DSA:3.40.30.10 18 254 6.4E-110 T 11-10-2018 VSVS12_01164 e65e5b895b60004ba8770cdcf3dd2843 286 Gene3D G3DSA:1.20.1050.10 132 248 6.4E-110 T 11-10-2018 VSVS12_01164 e65e5b895b60004ba8770cdcf3dd2843 286 Pfam PF13410 Glutathione S-transferase, C-terminal domain 176 242 1.5E-11 T 11-10-2018 VSVS12_03807 fc948d69a7928406034bd46504ec79bf 401 SUPERFAMILY SSF103473 7 389 2.49E-57 T 11-10-2018 IPR036259 MFS transporter superfamily VSVS12_03807 fc948d69a7928406034bd46504ec79bf 401 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 8 383 7.9E-62 T 11-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 VSVS12_03807 fc948d69a7928406034bd46504ec79bf 401 Gene3D G3DSA:1.20.1720.10 11 385 3.6E-98 T 11-10-2018 VSVS12_03807 fc948d69a7928406034bd46504ec79bf 401 Pfam PF07690 Major Facilitator Superfamily 15 354 1.5E-42 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VSVS12_03553 66d83289efd9dfa857b1ecfbc99913b3 627 Gene3D G3DSA:2.60.120.10 2 135 3.2E-21 T 11-10-2018 IPR014710 RmlC-like jelly roll fold VSVS12_03553 66d83289efd9dfa857b1ecfbc99913b3 627 SUPERFAMILY SSF54631 145 278 1.39E-28 T 11-10-2018 VSVS12_03553 66d83289efd9dfa857b1ecfbc99913b3 627 Pfam PF00571 CBS domain 226 278 1.1E-10 T 11-10-2018 IPR000644 CBS domain VSVS12_03553 66d83289efd9dfa857b1ecfbc99913b3 627 Pfam PF00571 CBS domain 153 212 2.3E-8 T 11-10-2018 IPR000644 CBS domain VSVS12_03553 66d83289efd9dfa857b1ecfbc99913b3 627 Gene3D G3DSA:3.10.580.10 144 282 1.9E-33 T 11-10-2018 VSVS12_03553 66d83289efd9dfa857b1ecfbc99913b3 627 Pfam PF00027 Cyclic nucleotide-binding domain 37 118 1.0E-10 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain VSVS12_03553 66d83289efd9dfa857b1ecfbc99913b3 627 Pfam PF03445 Putative nucleotidyltransferase DUF294 305 442 2.5E-46 T 11-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 VSVS12_03553 66d83289efd9dfa857b1ecfbc99913b3 627 SMART SM00116 233 280 0.028 T 11-10-2018 IPR000644 CBS domain VSVS12_03553 66d83289efd9dfa857b1ecfbc99913b3 627 SMART SM00116 159 216 0.037 T 11-10-2018 IPR000644 CBS domain VSVS12_03553 66d83289efd9dfa857b1ecfbc99913b3 627 SMART SM00100 17 134 9.0E-13 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain VSVS12_03553 66d83289efd9dfa857b1ecfbc99913b3 627 SUPERFAMILY SSF51206 7 133 4.19E-25 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like VSVS12_03553 66d83289efd9dfa857b1ecfbc99913b3 627 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 479 622 8.5E-44 T 11-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding VSVS12_03775 781e1ec619c6e8d90be0e9b3943dadb5 406 Pfam PF07055 Enoyl reductase FAD binding domain 326 389 4.4E-22 T 11-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VSVS12_03775 781e1ec619c6e8d90be0e9b3943dadb5 406 Gene3D G3DSA:3.40.50.720 1 398 2.9E-162 T 11-10-2018 VSVS12_03775 781e1ec619c6e8d90be0e9b3943dadb5 406 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 395 51.065 T 11-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VSVS12_03775 781e1ec619c6e8d90be0e9b3943dadb5 406 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 84 319 5.2E-97 T 11-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VSVS12_03775 781e1ec619c6e8d90be0e9b3943dadb5 406 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 80 1.1E-33 T 11-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VSVS12_02941 0bd0a5d5ac6f77831c0a2fb51989446b 182 Pfam PF02357 Transcription termination factor nusG 7 112 5.7E-27 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VSVS12_02941 0bd0a5d5ac6f77831c0a2fb51989446b 182 SUPERFAMILY SSF82679 6 116 4.71E-40 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VSVS12_02941 0bd0a5d5ac6f77831c0a2fb51989446b 182 SMART SM00738 6 115 6.0E-51 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VSVS12_02941 0bd0a5d5ac6f77831c0a2fb51989446b 182 SUPERFAMILY SSF50104 126 181 4.31E-19 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily VSVS12_02941 0bd0a5d5ac6f77831c0a2fb51989446b 182 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 11-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site VSVS12_02941 0bd0a5d5ac6f77831c0a2fb51989446b 182 SMART SM00739 127 154 3.2E-4 T 11-10-2018 IPR005824 KOW VSVS12_02941 0bd0a5d5ac6f77831c0a2fb51989446b 182 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 181 2.0E-69 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 VSVS12_02941 0bd0a5d5ac6f77831c0a2fb51989446b 182 Gene3D G3DSA:2.30.30.30 123 181 2.5E-25 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 VSVS12_02941 0bd0a5d5ac6f77831c0a2fb51989446b 182 Gene3D G3DSA:3.30.70.940 1 122 3.8E-47 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VSVS12_02941 0bd0a5d5ac6f77831c0a2fb51989446b 182 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 25.574 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 VSVS12_02941 0bd0a5d5ac6f77831c0a2fb51989446b 182 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 1.8E-20 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 VSVS12_02941 0bd0a5d5ac6f77831c0a2fb51989446b 182 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 1.8E-20 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 VSVS12_02941 0bd0a5d5ac6f77831c0a2fb51989446b 182 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 1.8E-20 T 11-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 VSVS12_02941 0bd0a5d5ac6f77831c0a2fb51989446b 182 Pfam PF00467 KOW motif 131 160 7.8E-8 T 11-10-2018 IPR005824 KOW VSVS12_02795 2c481415c6fee16208654c8d3e010e77 426 Pfam PF00589 Phage integrase family 227 389 1.2E-26 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VSVS12_02795 2c481415c6fee16208654c8d3e010e77 426 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 119 170 1.1E-10 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VSVS12_02795 2c481415c6fee16208654c8d3e010e77 426 Gene3D G3DSA:1.10.443.10 225 400 4.4E-19 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VSVS12_02795 2c481415c6fee16208654c8d3e010e77 426 SUPERFAMILY SSF56349 119 399 3.83E-59 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VSVS12_02795 2c481415c6fee16208654c8d3e010e77 426 Gene3D G3DSA:3.30.160.390 19 108 7.9E-30 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily VSVS12_02795 2c481415c6fee16208654c8d3e010e77 426 Gene3D G3DSA:1.10.150.130 109 224 2.0E-27 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal VSVS12_02795 2c481415c6fee16208654c8d3e010e77 426 Pfam PF13356 Arm DNA-binding domain 21 107 2.0E-18 T 11-10-2018 IPR025166 Integrase, DNA-binding domain VSVS12_01221 3ba309d605e48d80044f9981afcc2e74 277 Pfam PF00551 Formyl transferase 82 259 3.9E-48 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VSVS12_01221 3ba309d605e48d80044f9981afcc2e74 277 PIRSF PIRSF036480 1 277 3.8E-111 T 11-10-2018 VSVS12_01221 3ba309d605e48d80044f9981afcc2e74 277 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 5 277 1.3E-119 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VSVS12_01221 3ba309d605e48d80044f9981afcc2e74 277 Gene3D G3DSA:3.30.70.260 1 82 1.8E-14 T 11-10-2018 VSVS12_01221 3ba309d605e48d80044f9981afcc2e74 277 Pfam PF01842 ACT domain 5 65 4.3E-7 T 11-10-2018 IPR002912 ACT domain VSVS12_01221 3ba309d605e48d80044f9981afcc2e74 277 Gene3D G3DSA:3.40.50.170 83 277 2.7E-66 T 11-10-2018 VSVS12_01221 3ba309d605e48d80044f9981afcc2e74 277 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 1 277 44.317 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VSVS12_01221 3ba309d605e48d80044f9981afcc2e74 277 SUPERFAMILY SSF53328 82 276 4.06E-59 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VSVS12_01221 3ba309d605e48d80044f9981afcc2e74 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 6 32 4.9E-63 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VSVS12_01221 3ba309d605e48d80044f9981afcc2e74 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 229 251 4.9E-63 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VSVS12_01221 3ba309d605e48d80044f9981afcc2e74 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 38 50 4.9E-63 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VSVS12_01221 3ba309d605e48d80044f9981afcc2e74 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 83 105 4.9E-63 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VSVS12_01221 3ba309d605e48d80044f9981afcc2e74 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 105 132 4.9E-63 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VSVS12_01221 3ba309d605e48d80044f9981afcc2e74 277 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 251 276 4.9E-63 T 11-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 VSVS12_01221 3ba309d605e48d80044f9981afcc2e74 277 SUPERFAMILY SSF55021 4 55 2.71E-8 T 11-10-2018 VSVS12_02550 4bc039c227cd9c4767d1b00986107730 1076 SUPERFAMILY SSF52440 1 127 3.74E-50 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VSVS12_02550 4bc039c227cd9c4767d1b00986107730 1076 Gene3D G3DSA:1.10.1030.10 404 553 4.0E-51 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VSVS12_02550 4bc039c227cd9c4767d1b00986107730 1076 SUPERFAMILY SSF52335 937 1071 2.62E-34 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VSVS12_02550 4bc039c227cd9c4767d1b00986107730 1076 SUPERFAMILY SSF56059 128 401 1.1E-108 T 11-10-2018 VSVS12_02550 4bc039c227cd9c4767d1b00986107730 1076 SMART SM01096 424 547 1.4E-74 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VSVS12_02550 4bc039c227cd9c4767d1b00986107730 1076 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 838 845 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VSVS12_02550 4bc039c227cd9c4767d1b00986107730 1076 Gene3D G3DSA:3.30.470.20 665 934 3.0E-123 T 11-10-2018 VSVS12_02550 4bc039c227cd9c4767d1b00986107730 1076 SUPERFAMILY SSF52440 556 675 3.17E-49 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VSVS12_02550 4bc039c227cd9c4767d1b00986107730 1076 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1052 0.0 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VSVS12_02550 4bc039c227cd9c4767d1b00986107730 1076 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1067 13.373 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VSVS12_02550 4bc039c227cd9c4767d1b00986107730 1076 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 6.3E-40 T 11-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VSVS12_02550 4bc039c227cd9c4767d1b00986107730 1076 Gene3D G3DSA:3.40.50.20 554 662 3.7E-49 T 11-10-2018 VSVS12_02550 4bc039c227cd9c4767d1b00986107730 1076 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VSVS12_02550 4bc039c227cd9c4767d1b00986107730 1076 Pfam PF02142 MGS-like domain 956 1041 8.5E-16 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain VSVS12_02550 4bc039c227cd9c4767d1b00986107730 1076 SMART SM00851 955 1041 1.3E-25 T 11-10-2018 IPR011607 Methylglyoxal synthase-like domain VSVS12_02550 4bc039c227cd9c4767d1b00986107730 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 1.6E-64 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VSVS12_02550 4bc039c227cd9c4767d1b00986107730 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.6E-64 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VSVS12_02550 4bc039c227cd9c4767d1b00986107730 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 1.6E-64 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VSVS12_02550 4bc039c227cd9c4767d1b00986107730 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.6E-64 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VSVS12_02550 4bc039c227cd9c4767d1b00986107730 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.6E-64 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VSVS12_02550 4bc039c227cd9c4767d1b00986107730 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.6E-64 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VSVS12_02550 4bc039c227cd9c4767d1b00986107730 1076 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.6E-64 T 11-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VSVS12_02550 4bc039c227cd9c4767d1b00986107730 1076 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VSVS12_02550 4bc039c227cd9c4767d1b00986107730 1076 SUPERFAMILY SSF56059 673 932 7.07E-103 T 11-10-2018 VSVS12_02550 4bc039c227cd9c4767d1b00986107730 1076 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 673 874 2.8E-36 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VSVS12_02550 4bc039c227cd9c4767d1b00986107730 1076 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 1.8E-72 T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VSVS12_02550 4bc039c227cd9c4767d1b00986107730 1076 Gene3D G3DSA:3.40.50.1380 937 1072 1.9E-33 T 11-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily VSVS12_02550 4bc039c227cd9c4767d1b00986107730 1076 Gene3D G3DSA:3.30.470.20 119 403 9.7E-129 T 11-10-2018 VSVS12_02550 4bc039c227cd9c4767d1b00986107730 1076 Gene3D G3DSA:3.40.50.20 1 116 2.2E-50 T 11-10-2018 VSVS12_02550 4bc039c227cd9c4767d1b00986107730 1076 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1062 13.076 T 11-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VSVS12_02550 4bc039c227cd9c4767d1b00986107730 1076 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 709 723 - T 11-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 VSVS12_02550 4bc039c227cd9c4767d1b00986107730 1076 SUPERFAMILY SSF48108 396 554 2.35E-51 T 11-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VSVS12_03526 02fa43dc20e100ee5d415db896e67193 150 ProSitePatterns PS00196 Type-1 copper (blue) proteins signature. 127 143 - T 11-10-2018 IPR028871 Blue (type 1) copper protein, binding site VSVS12_03526 02fa43dc20e100ee5d415db896e67193 150 SUPERFAMILY SSF49503 23 147 7.76E-44 T 11-10-2018 IPR008972 Cupredoxin VSVS12_03526 02fa43dc20e100ee5d415db896e67193 150 Gene3D G3DSA:2.60.40.420 23 149 1.2E-41 T 11-10-2018 IPR008972 Cupredoxin VSVS12_03526 02fa43dc20e100ee5d415db896e67193 150 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 23 147 4.2E-22 T 11-10-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 VSVS12_03526 02fa43dc20e100ee5d415db896e67193 150 TIGRFAM TIGR02695 azurin: azurin 25 149 3.0E-58 T 11-10-2018 IPR014068 Azurin VSVS12_03526 02fa43dc20e100ee5d415db896e67193 150 ProDom PD003655 COPPER ELECTRON AZURIN METAL-BINDING PERIPLASMIC PRECURSOR SIGNAL SEQUENCING DIRECT MEMBRANE 27 149 5.0E-54 T 11-10-2018 VSVS12_03681 550283b46be8a0853219a85da0baa98f 128 Pfam PF07361 Cytochrome b562 23 118 2.2E-19 T 11-10-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 VSVS12_03681 550283b46be8a0853219a85da0baa98f 128 SUPERFAMILY SSF47175 23 118 4.12E-20 T 11-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 VSVS12_03681 550283b46be8a0853219a85da0baa98f 128 Gene3D G3DSA:1.20.120.10 22 118 5.5E-8 T 11-10-2018 VSVS12_03154 443f8f18a6b67fe84ad090e808c0f5f4 387 PRINTS PR00166 Aromatic amino acid permease signature 80 100 6.4E-26 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VSVS12_03154 443f8f18a6b67fe84ad090e808c0f5f4 387 PRINTS PR00166 Aromatic amino acid permease signature 325 344 6.4E-26 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VSVS12_03154 443f8f18a6b67fe84ad090e808c0f5f4 387 PRINTS PR00166 Aromatic amino acid permease signature 145 165 6.4E-26 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VSVS12_03154 443f8f18a6b67fe84ad090e808c0f5f4 387 PRINTS PR00166 Aromatic amino acid permease signature 35 54 6.4E-26 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VSVS12_03154 443f8f18a6b67fe84ad090e808c0f5f4 387 PRINTS PR00166 Aromatic amino acid permease signature 180 202 6.4E-26 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VSVS12_03154 443f8f18a6b67fe84ad090e808c0f5f4 387 PRINTS PR00166 Aromatic amino acid permease signature 304 322 6.4E-26 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VSVS12_03154 443f8f18a6b67fe84ad090e808c0f5f4 387 PRINTS PR00166 Aromatic amino acid permease signature 8 31 6.4E-26 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VSVS12_03154 443f8f18a6b67fe84ad090e808c0f5f4 387 Gene3D G3DSA:1.20.1740.10 1 387 2.0E-7 T 11-10-2018 VSVS12_03154 443f8f18a6b67fe84ad090e808c0f5f4 387 Pfam PF03222 Tryptophan/tyrosine permease family 2 382 1.5E-68 T 11-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 VSVS12_01847 bb2c0ca0cdb834bb331475a302f87b15 221 Pfam PF11140 Protein of unknown function (DUF2913) 4 214 4.2E-81 T 11-10-2018 IPR021316 Protein of unknown function DUF2913 VSVS12_03952 c9720341932f4282ee32ea832fa9e89d 455 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 386 449 4.0E-6 T 11-10-2018 VSVS12_03952 c9720341932f4282ee32ea832fa9e89d 455 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 225 302 1.0E-7 T 11-10-2018 VSVS12_03952 c9720341932f4282ee32ea832fa9e89d 455 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 319 421 1.2E-13 T 11-10-2018 IPR023885 4Fe4S-binding SPASM domain VSVS12_03952 c9720341932f4282ee32ea832fa9e89d 455 Pfam PF04055 Radical SAM superfamily 56 241 4.8E-11 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VSVS12_03952 c9720341932f4282ee32ea832fa9e89d 455 SUPERFAMILY SSF102114 55 403 4.32E-31 T 11-10-2018 VSVS12_03952 c9720341932f4282ee32ea832fa9e89d 455 TIGRFAM TIGR03942 sulfatase_rSAM: anaerobic sulfatase maturase 50 439 4.8E-133 T 11-10-2018 VSVS12_03952 c9720341932f4282ee32ea832fa9e89d 455 Gene3D G3DSA:3.20.20.70 46 443 1.7E-106 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_02377 53ba6bedd22c6bb9177b2946277b1333 73 Pfam PF10981 Protein of unknown function (DUF2788) 18 67 8.1E-18 T 11-10-2018 IPR021249 Protein of unknown function DUF2788 VSVS12_02061 ac131663a97df7f337511fb539af624d 357 SUPERFAMILY SSF54211 254 344 1.9E-31 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VSVS12_02061 ac131663a97df7f337511fb539af624d 357 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 321 333 - T 11-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 VSVS12_02061 ac131663a97df7f337511fb539af624d 357 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 228 241 - T 11-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 VSVS12_02061 ac131663a97df7f337511fb539af624d 357 SUPERFAMILY SSF54211 169 253 8.35E-32 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VSVS12_02061 ac131663a97df7f337511fb539af624d 357 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 169 357 37.721 T 11-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 VSVS12_02061 ac131663a97df7f337511fb539af624d 357 SUPERFAMILY SSF56784 3 158 7.73E-40 T 11-10-2018 IPR036412 HAD-like superfamily VSVS12_02061 ac131663a97df7f337511fb539af624d 357 Gene3D G3DSA:3.30.230.40 166 256 2.2E-35 T 11-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 VSVS12_02061 ac131663a97df7f337511fb539af624d 357 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 4 357 51.026 T 11-10-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 VSVS12_02061 ac131663a97df7f337511fb539af624d 357 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 198 339 8.5E-66 T 11-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 VSVS12_02061 ac131663a97df7f337511fb539af624d 357 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 6 151 3.1E-28 T 11-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 VSVS12_02061 ac131663a97df7f337511fb539af624d 357 Gene3D G3DSA:3.40.50.1000 1 165 1.8E-47 T 11-10-2018 IPR023214 HAD superfamily VSVS12_02061 ac131663a97df7f337511fb539af624d 357 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 147 5.8E-48 T 11-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 VSVS12_02061 ac131663a97df7f337511fb539af624d 357 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 5 164 5.9E-79 T 11-10-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 VSVS12_02061 ac131663a97df7f337511fb539af624d 357 Pfam PF08645 Polynucleotide kinase 3 phosphatase 6 132 9.3E-6 T 11-10-2018 IPR013954 Polynucleotide kinase 3 phosphatase Reactome: R-HSA-5649702 VSVS12_02061 ac131663a97df7f337511fb539af624d 357 Gene3D G3DSA:3.30.230.40 257 357 2.6E-37 T 11-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 VSVS12_03552 e0d76ab1314f722e7dc565d7428e6c07 462 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 411 427 - T 11-10-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 VSVS12_03552 e0d76ab1314f722e7dc565d7428e6c07 462 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 42 461 4.0E-112 T 11-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VSVS12_03552 e0d76ab1314f722e7dc565d7428e6c07 462 Pfam PF00939 Sodium:sulfate symporter transmembrane region 29 461 1.3E-53 T 11-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VSVS12_03899 94172297ef2c8ced3d25decddc7037d5 129 Gene3D G3DSA:1.10.260.40 1 63 3.6E-16 T 11-10-2018 VSVS12_03899 94172297ef2c8ced3d25decddc7037d5 129 SUPERFAMILY SSF47413 2 63 3.84E-14 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VSVS12_03899 94172297ef2c8ced3d25decddc7037d5 129 SMART SM00530 5 60 1.0E-12 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VSVS12_03899 94172297ef2c8ced3d25decddc7037d5 129 Pfam PF01381 Helix-turn-helix 6 59 4.9E-14 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VSVS12_04325 e7f00542880a3fae240e7c232fef5850 177 SUPERFAMILY SSF52833 7 175 6.03E-29 T 11-10-2018 IPR036249 Thioredoxin-like superfamily VSVS12_04325 e7f00542880a3fae240e7c232fef5850 177 Pfam PF08534 Redoxin 7 150 1.3E-19 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 VSVS12_04325 e7f00542880a3fae240e7c232fef5850 177 Gene3D G3DSA:3.40.30.10 5 165 2.6E-21 T 11-10-2018 VSVS12_03626 1144cc91ab062478bf78620659b34852 1015 Gene3D G3DSA:3.40.50.300 721 1011 2.4E-26 T 11-10-2018 VSVS12_03626 1144cc91ab062478bf78620659b34852 1015 Pfam PF13558 Putative exonuclease SbcCD, C subunit 904 971 4.6E-12 T 11-10-2018 VSVS12_03626 1144cc91ab062478bf78620659b34852 1015 SUPERFAMILY SSF57997 604 720 4.77E-5 T 11-10-2018 VSVS12_03626 1144cc91ab062478bf78620659b34852 1015 SUPERFAMILY SSF52540 1 1008 1.87E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03626 1144cc91ab062478bf78620659b34852 1015 Pfam PF13555 P-loop containing region of AAA domain 12 56 6.6E-7 T 11-10-2018 VSVS12_03626 1144cc91ab062478bf78620659b34852 1015 Gene3D G3DSA:3.40.50.300 1 342 1.3E-41 T 11-10-2018 VSVS12_00580 488894a5fd70c6b7f20c5686b9c97606 373 SUPERFAMILY SSF53383 9 371 1.67E-100 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VSVS12_00580 488894a5fd70c6b7f20c5686b9c97606 373 Pfam PF00266 Aminotransferase class-V 13 354 3.2E-38 T 11-10-2018 IPR000192 Aminotransferase class V domain VSVS12_00580 488894a5fd70c6b7f20c5686b9c97606 373 PIRSF PIRSF000524 5 373 6.0E-111 T 11-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 VSVS12_00580 488894a5fd70c6b7f20c5686b9c97606 373 Gene3D G3DSA:3.40.640.10 22 270 3.8E-141 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VSVS12_00580 488894a5fd70c6b7f20c5686b9c97606 373 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 209 - T 11-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site VSVS12_00580 488894a5fd70c6b7f20c5686b9c97606 373 Gene3D G3DSA:3.90.1150.10 9 369 3.8E-141 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VSVS12_01295 36d05c8b48fc43de99ab034448b8bdb3 196 SUPERFAMILY SSF46689 4 76 1.07E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_01295 36d05c8b48fc43de99ab034448b8bdb3 196 Pfam PF13305 WHG domain 93 172 8.1E-12 T 11-10-2018 IPR025996 WHG domain VSVS12_01295 36d05c8b48fc43de99ab034448b8bdb3 196 SUPERFAMILY SSF48498 82 195 2.99E-20 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VSVS12_01295 36d05c8b48fc43de99ab034448b8bdb3 196 Gene3D G3DSA:1.10.357.10 1 192 2.6E-41 T 11-10-2018 VSVS12_01622 44a9a0e5f8c3cfe3ef01b52c192637b3 385 PIRSF PIRSF029038 47 384 2.0E-143 T 11-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 VSVS12_01622 44a9a0e5f8c3cfe3ef01b52c192637b3 385 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 58 374 52.415 T 11-10-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 VSVS12_01622 44a9a0e5f8c3cfe3ef01b52c192637b3 385 SUPERFAMILY SSF53335 97 371 3.78E-27 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_01622 44a9a0e5f8c3cfe3ef01b52c192637b3 385 Pfam PF05971 Protein of unknown function (DUF890) 58 372 6.4E-126 T 11-10-2018 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 VSVS12_01622 44a9a0e5f8c3cfe3ef01b52c192637b3 385 Gene3D G3DSA:3.40.50.150 92 372 1.7E-72 T 11-10-2018 VSVS12_01310 3cc49bd938da2e52ab553eaa0af5fced 296 Gene3D G3DSA:1.10.10.10 5 93 9.5E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_01310 3cc49bd938da2e52ab553eaa0af5fced 296 SUPERFAMILY SSF53850 90 296 1.99E-36 T 11-10-2018 VSVS12_01310 3cc49bd938da2e52ab553eaa0af5fced 296 Gene3D G3DSA:3.40.190.290 94 294 1.8E-57 T 11-10-2018 VSVS12_01310 3cc49bd938da2e52ab553eaa0af5fced 296 SUPERFAMILY SSF46785 6 86 1.33E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_01310 3cc49bd938da2e52ab553eaa0af5fced 296 Pfam PF03466 LysR substrate binding domain 91 295 3.6E-35 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_01310 3cc49bd938da2e52ab553eaa0af5fced 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.2E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_01310 3cc49bd938da2e52ab553eaa0af5fced 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.2E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_01310 3cc49bd938da2e52ab553eaa0af5fced 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.2E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_01310 3cc49bd938da2e52ab553eaa0af5fced 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 66 2.9E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_02305 6a034a466822998161674e69f6878f24 103 Pfam PF02049 Flagellar hook-basal body complex protein FliE 18 103 3.0E-28 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VSVS12_02305 6a034a466822998161674e69f6878f24 103 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 1 103 16.392 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VSVS12_02305 6a034a466822998161674e69f6878f24 103 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 27 102 9.5E-19 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VSVS12_02305 6a034a466822998161674e69f6878f24 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 67 83 2.9E-12 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VSVS12_02305 6a034a466822998161674e69f6878f24 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 88 101 2.9E-12 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VSVS12_02305 6a034a466822998161674e69f6878f24 103 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 32 48 2.9E-12 T 11-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 VSVS12_00962 6c9dd7fe4a6d6dc216faea89555d3fd3 320 Gene3D G3DSA:2.40.160.20 21 171 2.6E-29 T 11-10-2018 VSVS12_00962 6c9dd7fe4a6d6dc216faea89555d3fd3 320 SUPERFAMILY SSF56925 21 173 1.28E-25 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VSVS12_00962 6c9dd7fe4a6d6dc216faea89555d3fd3 320 Gene3D G3DSA:3.30.1330.60 180 318 5.2E-45 T 11-10-2018 IPR036737 OmpA-like domain superfamily VSVS12_00962 6c9dd7fe4a6d6dc216faea89555d3fd3 320 SUPERFAMILY SSF103088 185 311 6.67E-39 T 11-10-2018 IPR036737 OmpA-like domain superfamily VSVS12_00962 6c9dd7fe4a6d6dc216faea89555d3fd3 320 PRINTS PR01021 OMPA domain signature 211 233 7.1E-16 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VSVS12_00962 6c9dd7fe4a6d6dc216faea89555d3fd3 320 PRINTS PR01021 OMPA domain signature 241 256 7.1E-16 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VSVS12_00962 6c9dd7fe4a6d6dc216faea89555d3fd3 320 PRINTS PR01021 OMPA domain signature 256 272 7.1E-16 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VSVS12_00962 6c9dd7fe4a6d6dc216faea89555d3fd3 320 Pfam PF00691 OmpA family 210 305 2.4E-24 T 11-10-2018 IPR006665 OmpA-like domain VSVS12_00962 6c9dd7fe4a6d6dc216faea89555d3fd3 320 Pfam PF01389 OmpA-like transmembrane domain 23 173 2.7E-31 T 11-10-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 VSVS12_03262 2cec149d753410484684122b35e06622 141 Gene3D G3DSA:3.10.180.10 7 131 1.1E-40 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VSVS12_03262 2cec149d753410484684122b35e06622 141 SUPERFAMILY SSF54593 4 122 3.58E-26 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VSVS12_03262 2cec149d753410484684122b35e06622 141 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 122 1.9E-12 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VSVS12_04147 3bec54cbe2ec747053b4fe5f0098e9a7 318 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 36 166 1.2E-62 T 11-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 VSVS12_04147 3bec54cbe2ec747053b4fe5f0098e9a7 318 SUPERFAMILY SSF52540 6 290 1.49E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_04147 3bec54cbe2ec747053b4fe5f0098e9a7 318 Gene3D G3DSA:3.40.50.300 17 183 7.1E-47 T 11-10-2018 VSVS12_04147 3bec54cbe2ec747053b4fe5f0098e9a7 318 Gene3D G3DSA:1.10.8.300 199 315 3.3E-38 T 11-10-2018 VSVS12_04147 3bec54cbe2ec747053b4fe5f0098e9a7 318 PIRSF PIRSF002849 1 318 1.1E-128 T 11-10-2018 VSVS12_02647 0361f1535df1722bf0a951ef454f8c7c 241 SUPERFAMILY SSF57863 88 166 2.88E-12 T 11-10-2018 IPR037278 ARFGAP/RecO-like zinc finger VSVS12_02647 0361f1535df1722bf0a951ef454f8c7c 241 TIGRFAM TIGR00613 reco: DNA repair protein RecO 8 229 3.6E-39 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 VSVS12_02647 0361f1535df1722bf0a951ef454f8c7c 241 Gene3D G3DSA:1.20.1440.120 81 239 1.9E-52 T 11-10-2018 VSVS12_02647 0361f1535df1722bf0a951ef454f8c7c 241 Gene3D G3DSA:2.40.50.140 3 80 8.8E-33 T 11-10-2018 VSVS12_02647 0361f1535df1722bf0a951ef454f8c7c 241 Pfam PF02565 Recombination protein O C terminal 88 227 3.0E-23 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 VSVS12_02647 0361f1535df1722bf0a951ef454f8c7c 241 Pfam PF11967 Recombination protein O N terminal 7 78 2.3E-23 T 11-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal VSVS12_02647 0361f1535df1722bf0a951ef454f8c7c 241 Hamap MF_00201 DNA repair protein RecO [recO]. 3 233 22.769 T 11-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 VSVS12_02647 0361f1535df1722bf0a951ef454f8c7c 241 SUPERFAMILY SSF50249 7 77 3.94E-15 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_01185 cb844c8a143e4c3184ac8d5aca351b2b 322 Pfam PF00593 TonB dependent receptor 3 320 7.4E-62 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VSVS12_01185 cb844c8a143e4c3184ac8d5aca351b2b 322 Gene3D G3DSA:2.40.170.20 1 322 4.9E-87 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VSVS12_01185 cb844c8a143e4c3184ac8d5aca351b2b 322 SUPERFAMILY SSF56935 3 322 5.5E-61 T 11-10-2018 VSVS12_01667 6b85e39f7e79f6cf4eeeae36d032e917 868 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 443 544 7.8E-34 T 11-10-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold VSVS12_01667 6b85e39f7e79f6cf4eeeae36d032e917 868 Gene3D G3DSA:2.60.40.1730 15 193 7.9E-70 T 11-10-2018 VSVS12_01667 6b85e39f7e79f6cf4eeeae36d032e917 868 SUPERFAMILY SSF55486 203 449 6.41E-73 T 11-10-2018 VSVS12_01667 6b85e39f7e79f6cf4eeeae36d032e917 868 Gene3D G3DSA:1.10.1740.60 194 278 1.0E-38 T 11-10-2018 VSVS12_01667 6b85e39f7e79f6cf4eeeae36d032e917 868 Gene3D G3DSA:2.60.40.1840 443 544 2.2E-36 T 11-10-2018 IPR038438 Alanyl aminopeptidase, Ig-like domain superfamily VSVS12_01667 6b85e39f7e79f6cf4eeeae36d032e917 868 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 547 866 4.2E-115 T 11-10-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal VSVS12_01667 6b85e39f7e79f6cf4eeeae36d032e917 868 Pfam PF01433 Peptidase family M1 domain 207 435 2.0E-57 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VSVS12_01667 6b85e39f7e79f6cf4eeeae36d032e917 868 Gene3D G3DSA:1.10.390.10 279 442 1.7E-64 T 11-10-2018 IPR027268 Peptidase M4/M1, CTD superfamily VSVS12_01667 6b85e39f7e79f6cf4eeeae36d032e917 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 312 324 3.4E-9 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VSVS12_01667 6b85e39f7e79f6cf4eeeae36d032e917 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 175 190 3.4E-9 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VSVS12_01667 6b85e39f7e79f6cf4eeeae36d032e917 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 293 308 3.4E-9 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VSVS12_01667 6b85e39f7e79f6cf4eeeae36d032e917 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 257 267 3.4E-9 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VSVS12_01667 6b85e39f7e79f6cf4eeeae36d032e917 868 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 125 140 3.4E-9 T 11-10-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 VSVS12_01667 6b85e39f7e79f6cf4eeeae36d032e917 868 Gene3D G3DSA:1.25.50.10 545 867 9.6E-116 T 11-10-2018 IPR037144 Peptidase M1, alanyl aminopeptidase, C-terminal domain superfamily VSVS12_01667 6b85e39f7e79f6cf4eeeae36d032e917 868 SUPERFAMILY SSF63737 3 192 2.62E-45 T 11-10-2018 VSVS12_01667 6b85e39f7e79f6cf4eeeae36d032e917 868 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 866 0.0 T 11-10-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 VSVS12_03399 6d8255dd61338692a60871b06da3098d 308 SUPERFAMILY SSF103481 40 141 1.24E-12 T 11-10-2018 VSVS12_03399 6d8255dd61338692a60871b06da3098d 308 Pfam PF00892 EamA-like transporter family 154 286 1.6E-11 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VSVS12_03399 6d8255dd61338692a60871b06da3098d 308 Pfam PF00892 EamA-like transporter family 7 139 1.3E-23 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VSVS12_03454 92fd02e3df09257cacad4dd7c2a092f7 245 SUPERFAMILY SSF52172 3 128 1.71E-36 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_03454 92fd02e3df09257cacad4dd7c2a092f7 245 SMART SM00862 164 239 1.4E-9 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VSVS12_03454 92fd02e3df09257cacad4dd7c2a092f7 245 SMART SM00448 5 115 2.7E-38 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_03454 92fd02e3df09257cacad4dd7c2a092f7 245 Pfam PF00486 Transcriptional regulatory protein, C terminal 164 238 1.1E-12 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VSVS12_03454 92fd02e3df09257cacad4dd7c2a092f7 245 Pfam PF00072 Response regulator receiver domain 7 116 2.7E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_03454 92fd02e3df09257cacad4dd7c2a092f7 245 SUPERFAMILY SSF46894 155 239 1.47E-14 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VSVS12_03454 92fd02e3df09257cacad4dd7c2a092f7 245 Gene3D G3DSA:1.10.10.10 146 240 8.8E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_03454 92fd02e3df09257cacad4dd7c2a092f7 245 Gene3D G3DSA:3.40.50.2300 1 135 3.4E-32 T 11-10-2018 VSVS12_00487 cdf3fc9d381d719b9dfbf644c1782126 117 Gene3D G3DSA:3.30.420.100 1 117 1.4E-43 T 11-10-2018 VSVS12_00487 cdf3fc9d381d719b9dfbf644c1782126 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 25.709 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00487 cdf3fc9d381d719b9dfbf644c1782126 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 3.7E-43 T 11-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00487 cdf3fc9d381d719b9dfbf644c1782126 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 4.8E-44 T 11-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00487 cdf3fc9d381d719b9dfbf644c1782126 117 SUPERFAMILY SSF53137 3 115 2.14E-51 T 11-10-2018 VSVS12_00042 4a803c386b992e728c5a2e9b2c0c6eb6 312 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 232 248 - T 11-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VSVS12_00042 4a803c386b992e728c5a2e9b2c0c6eb6 312 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 6 298 39.677 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VSVS12_00042 4a803c386b992e728c5a2e9b2c0c6eb6 312 PIRSF PIRSF001438 1 312 1.2E-120 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VSVS12_00042 4a803c386b992e728c5a2e9b2c0c6eb6 312 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 7 213 1.8E-78 T 11-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VSVS12_00042 4a803c386b992e728c5a2e9b2c0c6eb6 312 SUPERFAMILY SSF54782 221 310 2.88E-28 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VSVS12_00042 4a803c386b992e728c5a2e9b2c0c6eb6 312 Gene3D G3DSA:3.30.160.40 222 307 2.3E-28 T 11-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VSVS12_00042 4a803c386b992e728c5a2e9b2c0c6eb6 312 Gene3D G3DSA:3.40.190.10 7 211 9.1E-84 T 11-10-2018 VSVS12_00042 4a803c386b992e728c5a2e9b2c0c6eb6 312 Gene3D G3DSA:3.40.190.10 104 203 9.1E-84 T 11-10-2018 VSVS12_00042 4a803c386b992e728c5a2e9b2c0c6eb6 312 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 7 298 3.6E-114 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VSVS12_00042 4a803c386b992e728c5a2e9b2c0c6eb6 312 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 228 296 1.8E-21 T 11-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VSVS12_00042 4a803c386b992e728c5a2e9b2c0c6eb6 312 PRINTS PR00151 Porphobilinogen deaminase signature 144 161 3.9E-47 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VSVS12_00042 4a803c386b992e728c5a2e9b2c0c6eb6 312 PRINTS PR00151 Porphobilinogen deaminase signature 46 66 3.9E-47 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VSVS12_00042 4a803c386b992e728c5a2e9b2c0c6eb6 312 PRINTS PR00151 Porphobilinogen deaminase signature 77 96 3.9E-47 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VSVS12_00042 4a803c386b992e728c5a2e9b2c0c6eb6 312 PRINTS PR00151 Porphobilinogen deaminase signature 125 142 3.9E-47 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VSVS12_00042 4a803c386b992e728c5a2e9b2c0c6eb6 312 PRINTS PR00151 Porphobilinogen deaminase signature 231 248 3.9E-47 T 11-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VSVS12_00042 4a803c386b992e728c5a2e9b2c0c6eb6 312 SUPERFAMILY SSF53850 6 220 1.09E-84 T 11-10-2018 VSVS12_00130 61e7373563161d4732f551fa57252452 516 Pfam PF02646 RmuC family 181 477 3.3E-106 T 11-10-2018 IPR003798 DNA recombination RmuC VSVS12_01159 21b909fc34664fc93b1cf241fa167e87 177 Pfam PF10688 Bacterial inner membrane protein 11 169 1.4E-49 T 11-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV VSVS12_01159 21b909fc34664fc93b1cf241fa167e87 177 PIRSF PIRSF011443 7 177 5.4E-60 T 11-10-2018 IPR026267 Inner membrane protein YgjV VSVS12_02425 c055391887cd8cde44bde8cf1c935d23 161 Pfam PF01668 SmpB protein 15 157 6.8E-55 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 VSVS12_02425 c055391887cd8cde44bde8cf1c935d23 161 SUPERFAMILY SSF74982 8 139 2.49E-47 T 11-10-2018 IPR023620 Small protein B VSVS12_02425 c055391887cd8cde44bde8cf1c935d23 161 ProSitePatterns PS01317 SsrA-binding protein. 33 45 - T 11-10-2018 IPR020081 SsrA-binding protein, conserved site VSVS12_02425 c055391887cd8cde44bde8cf1c935d23 161 Gene3D G3DSA:2.40.280.10 7 136 1.4E-43 T 11-10-2018 IPR023620 Small protein B VSVS12_02425 c055391887cd8cde44bde8cf1c935d23 161 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 15 139 7.0E-58 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 VSVS12_02425 c055391887cd8cde44bde8cf1c935d23 161 TIGRFAM TIGR00086 smpB: SsrA-binding protein 15 157 1.2E-50 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 VSVS12_02425 c055391887cd8cde44bde8cf1c935d23 161 Hamap MF_00023 SsrA-binding protein [smpB]. 1 161 67.431 T 11-10-2018 IPR000037 SsrA-binding protein GO:0003723 VSVS12_01629 b64279e5b42af4a2b50741896c23b94a 324 Gene3D G3DSA:2.40.30.170 34 322 9.2E-28 T 11-10-2018 VSVS12_01629 b64279e5b42af4a2b50741896c23b94a 324 Gene3D G3DSA:2.40.50.100 42 240 9.2E-28 T 11-10-2018 VSVS12_01629 b64279e5b42af4a2b50741896c23b94a 324 Gene3D G3DSA:1.10.287.470 76 205 9.2E-28 T 11-10-2018 VSVS12_01629 b64279e5b42af4a2b50741896c23b94a 324 SUPERFAMILY SSF111369 42 113 6.02E-7 T 11-10-2018 VSVS12_01629 b64279e5b42af4a2b50741896c23b94a 324 Pfam PF13437 HlyD family secretion protein 208 283 3.8E-6 T 11-10-2018 VSVS12_01629 b64279e5b42af4a2b50741896c23b94a 324 Pfam PF13533 Biotin-lipoyl like 45 89 3.3E-12 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VSVS12_01118 3354ccc6425f70f67ee57fd7274e6b57 898 PIRSF PIRSF000111 1 865 0.0 T 11-10-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 VSVS12_01118 3354ccc6425f70f67ee57fd7274e6b57 898 Gene3D G3DSA:1.20.1090.10 643 864 5.4E-60 T 11-10-2018 VSVS12_01118 3354ccc6425f70f67ee57fd7274e6b57 898 Gene3D G3DSA:3.40.605.10 12 446 5.1E-176 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VSVS12_01118 3354ccc6425f70f67ee57fd7274e6b57 898 SUPERFAMILY SSF53720 6 454 4.84E-82 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VSVS12_01118 3354ccc6425f70f67ee57fd7274e6b57 898 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 631 659 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VSVS12_01118 3354ccc6425f70f67ee57fd7274e6b57 898 SUPERFAMILY SSF56796 452 863 4.84E-115 T 11-10-2018 VSVS12_01118 3354ccc6425f70f67ee57fd7274e6b57 898 Pfam PF00171 Aldehyde dehydrogenase family 5 305 2.0E-23 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VSVS12_01118 3354ccc6425f70f67ee57fd7274e6b57 898 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 719 739 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VSVS12_01118 3354ccc6425f70f67ee57fd7274e6b57 898 Gene3D G3DSA:3.40.50.1970 451 642 1.2E-58 T 11-10-2018 VSVS12_01118 3354ccc6425f70f67ee57fd7274e6b57 898 Pfam PF00465 Iron-containing alcohol dehydrogenase 458 849 9.5E-113 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VSVS12_01118 3354ccc6425f70f67ee57fd7274e6b57 898 Gene3D G3DSA:3.40.309.10 218 405 5.1E-176 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VSVS12_00629 1ed3ec56c52387d8350bb781cc466602 156 SUPERFAMILY SSF46785 3 77 6.08E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_00629 1ed3ec56c52387d8350bb781cc466602 156 Pfam PF01316 Arginine repressor, DNA binding domain 6 72 2.2E-22 T 11-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 VSVS12_00629 1ed3ec56c52387d8350bb781cc466602 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 147 1.4E-21 T 11-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 VSVS12_00629 1ed3ec56c52387d8350bb781cc466602 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 58.284 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VSVS12_00629 1ed3ec56c52387d8350bb781cc466602 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 10 151 7.2E-43 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VSVS12_00629 1ed3ec56c52387d8350bb781cc466602 156 Gene3D G3DSA:3.30.1360.40 75 156 1.2E-33 T 11-10-2018 VSVS12_00629 1ed3ec56c52387d8350bb781cc466602 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 3.4E-23 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VSVS12_00629 1ed3ec56c52387d8350bb781cc466602 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 3.4E-23 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VSVS12_00629 1ed3ec56c52387d8350bb781cc466602 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 3.4E-23 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VSVS12_00629 1ed3ec56c52387d8350bb781cc466602 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 3.4E-23 T 11-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 VSVS12_00629 1ed3ec56c52387d8350bb781cc466602 156 Gene3D G3DSA:1.10.10.10 1 74 1.2E-33 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_00629 1ed3ec56c52387d8350bb781cc466602 156 SUPERFAMILY SSF55252 82 151 4.32E-19 T 11-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 VSVS12_00629 1ed3ec56c52387d8350bb781cc466602 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 146 1.0E-21 T 11-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 VSVS12_02701 9e0b5fca5807a3421f42062780246042 200 Gene3D G3DSA:3.40.50.10610 39 191 1.7E-5 T 11-10-2018 VSVS12_02701 9e0b5fca5807a3421f42062780246042 200 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 3 189 3.7E-39 T 11-10-2018 IPR014094 Penicillin-binding protein activator LpoB VSVS12_02701 9e0b5fca5807a3421f42062780246042 200 Pfam PF13036 Peptidoglycan-synthase activator LpoB 42 187 1.2E-34 T 11-10-2018 IPR014094 Penicillin-binding protein activator LpoB VSVS12_01720 2a9dc16b5422fa6aab3cf5f781981b04 681 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 564 669 6.8E-19 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_01720 2a9dc16b5422fa6aab3cf5f781981b04 681 SMART SM00387 560 671 1.5E-27 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_01720 2a9dc16b5422fa6aab3cf5f781981b04 681 SUPERFAMILY SSF47384 444 514 1.94E-11 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VSVS12_01720 2a9dc16b5422fa6aab3cf5f781981b04 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 602 616 6.5E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_01720 2a9dc16b5422fa6aab3cf5f781981b04 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 655 668 6.5E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_01720 2a9dc16b5422fa6aab3cf5f781981b04 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 620 630 6.5E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_01720 2a9dc16b5422fa6aab3cf5f781981b04 681 PRINTS PR00344 Bacterial sensor protein C-terminal signature 631 649 6.5E-18 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_01720 2a9dc16b5422fa6aab3cf5f781981b04 681 SUPERFAMILY SSF103190 113 311 3.14E-16 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VSVS12_01720 2a9dc16b5422fa6aab3cf5f781981b04 681 Pfam PF17202 Single cache domain 3 206 320 1.4E-26 T 11-10-2018 IPR033463 Single cache domain 3 VSVS12_01720 2a9dc16b5422fa6aab3cf5f781981b04 681 Gene3D G3DSA:1.10.287.130 442 515 1.0E-21 T 11-10-2018 VSVS12_01720 2a9dc16b5422fa6aab3cf5f781981b04 681 Gene3D G3DSA:3.30.565.10 520 675 1.8E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_01720 2a9dc16b5422fa6aab3cf5f781981b04 681 Pfam PF00512 His Kinase A (phospho-acceptor) domain 450 515 2.2E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_01720 2a9dc16b5422fa6aab3cf5f781981b04 681 SUPERFAMILY SSF55874 507 669 1.03E-35 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_01720 2a9dc16b5422fa6aab3cf5f781981b04 681 SMART SM00388 450 517 1.3E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_01521 06f3a690d933c29d52e2aed06ce25c3f 781 Gene3D G3DSA:2.10.10.20 738 780 8.5E-14 T 11-10-2018 VSVS12_01521 06f3a690d933c29d52e2aed06ce25c3f 781 SUPERFAMILY SSF51055 681 733 2.49E-15 T 11-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VSVS12_01521 06f3a690d933c29d52e2aed06ce25c3f 781 SUPERFAMILY SSF51445 24 470 1.63E-64 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily VSVS12_01521 06f3a690d933c29d52e2aed06ce25c3f 781 Pfam PF02839 Carbohydrate binding domain 708 730 3.8E-5 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VSVS12_01521 06f3a690d933c29d52e2aed06ce25c3f 781 Pfam PF02839 Carbohydrate binding domain 755 778 8.1E-6 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VSVS12_01521 06f3a690d933c29d52e2aed06ce25c3f 781 SUPERFAMILY SSF51055 737 780 6.93E-12 T 11-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VSVS12_01521 06f3a690d933c29d52e2aed06ce25c3f 781 SMART SM00495 691 733 6.6E-15 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VSVS12_01521 06f3a690d933c29d52e2aed06ce25c3f 781 SMART SM00495 738 781 7.6E-14 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VSVS12_01521 06f3a690d933c29d52e2aed06ce25c3f 781 Gene3D G3DSA:2.10.10.20 690 737 9.6E-17 T 11-10-2018 VSVS12_01521 06f3a690d933c29d52e2aed06ce25c3f 781 Gene3D G3DSA:3.20.20.80 387 486 3.1E-5 T 11-10-2018 VSVS12_01521 06f3a690d933c29d52e2aed06ce25c3f 781 SUPERFAMILY SSF54556 380 436 1.06E-5 T 11-10-2018 IPR029070 Chitinase insertion domain superfamily VSVS12_01521 06f3a690d933c29d52e2aed06ce25c3f 781 SMART SM00636 32 465 1.4E-58 T 11-10-2018 IPR011583 Chitinase II GO:0008061 VSVS12_01521 06f3a690d933c29d52e2aed06ce25c3f 781 Gene3D G3DSA:2.60.40.10 504 591 1.7E-6 T 11-10-2018 IPR013783 Immunoglobulin-like fold VSVS12_01521 06f3a690d933c29d52e2aed06ce25c3f 781 Pfam PF00704 Glycosyl hydrolases family 18 33 465 3.1E-61 T 11-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 VSVS12_03396 6793bad439f422154d9df7c6505d9528 513 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 26 494 1.2E-112 T 11-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 VSVS12_03396 6793bad439f422154d9df7c6505d9528 513 Pfam PF07690 Major Facilitator Superfamily 30 421 8.5E-54 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VSVS12_03396 6793bad439f422154d9df7c6505d9528 513 SUPERFAMILY SSF103473 12 510 5.36E-65 T 11-10-2018 IPR036259 MFS transporter superfamily VSVS12_03396 6793bad439f422154d9df7c6505d9528 513 Gene3D G3DSA:1.20.1720.10 25 213 4.5E-48 T 11-10-2018 VSVS12_02119 bceb9d7bac303dc035a39a3ded08ef4d 222 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 149 220 1.2E-15 T 11-10-2018 IPR006260 TonB/TolA, C-terminal VSVS12_02119 bceb9d7bac303dc035a39a3ded08ef4d 222 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 148 218 3.5E-17 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 VSVS12_02119 bceb9d7bac303dc035a39a3ded08ef4d 222 SUPERFAMILY SSF74653 142 206 1.44E-17 T 11-10-2018 VSVS12_02119 bceb9d7bac303dc035a39a3ded08ef4d 222 Gene3D G3DSA:3.30.2420.10 139 222 2.0E-22 T 11-10-2018 VSVS12_02119 bceb9d7bac303dc035a39a3ded08ef4d 222 PRINTS PR01374 Gram-negative bacterial tonB protein signature 164 182 1.3E-9 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VSVS12_02119 bceb9d7bac303dc035a39a3ded08ef4d 222 PRINTS PR01374 Gram-negative bacterial tonB protein signature 183 200 1.3E-9 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VSVS12_02119 bceb9d7bac303dc035a39a3ded08ef4d 222 PRINTS PR01374 Gram-negative bacterial tonB protein signature 143 164 1.3E-9 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VSVS12_01484 13eadd0bd411e6a6ce7c9d45b7e2b4d9 352 Pfam PF13533 Biotin-lipoyl like 61 104 3.0E-10 T 11-10-2018 IPR039562 Membrane fusion protein, biotin-lipoyl like domain VSVS12_01484 13eadd0bd411e6a6ce7c9d45b7e2b4d9 352 Gene3D G3DSA:2.40.420.20 36 348 3.4E-67 T 11-10-2018 VSVS12_01484 13eadd0bd411e6a6ce7c9d45b7e2b4d9 352 Gene3D G3DSA:1.10.287.470 91 149 3.4E-67 T 11-10-2018 VSVS12_01484 13eadd0bd411e6a6ce7c9d45b7e2b4d9 352 Pfam PF13437 HlyD family secretion protein 154 263 2.3E-8 T 11-10-2018 VSVS12_01484 13eadd0bd411e6a6ce7c9d45b7e2b4d9 352 SUPERFAMILY SSF111369 46 270 1.05E-20 T 11-10-2018 VSVS12_01484 13eadd0bd411e6a6ce7c9d45b7e2b4d9 352 Gene3D G3DSA:2.40.30.170 42 273 3.4E-67 T 11-10-2018 VSVS12_01484 13eadd0bd411e6a6ce7c9d45b7e2b4d9 352 Gene3D G3DSA:2.40.50.100 57 189 3.4E-67 T 11-10-2018 VSVS12_01484 13eadd0bd411e6a6ce7c9d45b7e2b4d9 352 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 351 7.4E-67 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VSVS12_02299 ace166e1a6854b6f9bb042a45a7c0aa8 582 Gene3D G3DSA:3.30.750.140 431 543 2.7E-33 T 11-10-2018 IPR038610 FliK-like, C-terminal domain superfamily VSVS12_02299 ace166e1a6854b6f9bb042a45a7c0aa8 582 Pfam PF02120 Flagellar hook-length control protein FliK 452 535 8.4E-26 T 11-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal VSVS12_03181 575bd2db93f362cb5d4660aae9c8ebb9 349 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 41 270 4.1E-16 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VSVS12_03181 575bd2db93f362cb5d4660aae9c8ebb9 349 Gene3D G3DSA:1.10.287.470 77 171 7.6E-21 T 11-10-2018 VSVS12_03181 575bd2db93f362cb5d4660aae9c8ebb9 349 Gene3D G3DSA:2.40.50.100 43 174 7.6E-21 T 11-10-2018 VSVS12_03181 575bd2db93f362cb5d4660aae9c8ebb9 349 SUPERFAMILY SSF56954 68 176 9.02E-6 T 11-10-2018 VSVS12_03181 575bd2db93f362cb5d4660aae9c8ebb9 349 SUPERFAMILY SSF111369 159 246 4.32E-5 T 11-10-2018 VSVS12_03181 575bd2db93f362cb5d4660aae9c8ebb9 349 SUPERFAMILY SSF111369 42 101 4.97E-11 T 11-10-2018 VSVS12_03181 575bd2db93f362cb5d4660aae9c8ebb9 349 Gene3D G3DSA:2.40.30.170 212 329 1.3E-18 T 11-10-2018 VSVS12_02153 5a109ea1071a9ab539ad75cb1be8d049 579 Pfam PF02065 Melibiase 238 349 3.2E-8 T 11-10-2018 IPR002252 Glycoside hydrolase family 36 GO:0004557|GO:0005975 KEGG: 00052+3.2.1.22|KEGG: 00561+3.2.1.22|KEGG: 00600+3.2.1.22|KEGG: 00603+3.2.1.22|MetaCyc: PWY-6527 VSVS12_02153 5a109ea1071a9ab539ad75cb1be8d049 579 SUPERFAMILY SSF51445 196 532 8.72E-48 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily VSVS12_02153 5a109ea1071a9ab539ad75cb1be8d049 579 Gene3D G3DSA:3.20.20.70 189 495 1.7E-71 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_00634 f9ff0cc2583705e424bae9ecdfbab689 86 Pfam PF01016 Ribosomal L27 protein 2 82 1.2E-39 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00634 f9ff0cc2583705e424bae9ecdfbab689 86 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.489 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00634 f9ff0cc2583705e424bae9ecdfbab689 86 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 11-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00634 f9ff0cc2583705e424bae9ecdfbab689 86 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 4.0E-18 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00634 f9ff0cc2583705e424bae9ecdfbab689 86 SUPERFAMILY SSF110324 2 80 1.6E-34 T 11-10-2018 VSVS12_00634 f9ff0cc2583705e424bae9ecdfbab689 86 Gene3D G3DSA:2.40.50.100 21 86 1.3E-31 T 11-10-2018 VSVS12_00634 f9ff0cc2583705e424bae9ecdfbab689 86 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 82 1.4E-43 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00634 f9ff0cc2583705e424bae9ecdfbab689 86 PRINTS PR00063 Ribosomal protein L27 signature 54 78 1.8E-39 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00634 f9ff0cc2583705e424bae9ecdfbab689 86 PRINTS PR00063 Ribosomal protein L27 signature 29 53 1.8E-39 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00634 f9ff0cc2583705e424bae9ecdfbab689 86 PRINTS PR00063 Ribosomal protein L27 signature 4 28 1.8E-39 T 11-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00151 2b19e7fcc10c5eb4784439476e26f498 259 SUPERFAMILY SSF53335 5 255 9.94E-76 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_00151 2b19e7fcc10c5eb4784439476e26f498 259 Pfam PF04445 Putative SAM-dependent methyltransferase 19 255 1.6E-108 T 11-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 VSVS12_00151 2b19e7fcc10c5eb4784439476e26f498 259 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 3 256 39.069 T 11-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 VSVS12_00151 2b19e7fcc10c5eb4784439476e26f498 259 Gene3D G3DSA:3.40.1630.10 1 56 2.3E-21 T 11-10-2018 VSVS12_00151 2b19e7fcc10c5eb4784439476e26f498 259 Gene3D G3DSA:3.40.50.150 57 259 1.1E-74 T 11-10-2018 VSVS12_02598 5bddb29f7ca0e69cedea9fb6814f60dd 310 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 190 206 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VSVS12_02598 5bddb29f7ca0e69cedea9fb6814f60dd 310 Pfam PF03462 PCRF domain 2 164 1.1E-51 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 VSVS12_02598 5bddb29f7ca0e69cedea9fb6814f60dd 310 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 310 33.328 T 11-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 VSVS12_02598 5bddb29f7ca0e69cedea9fb6814f60dd 310 Pfam PF00472 RF-1 domain 173 282 1.6E-40 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VSVS12_02598 5bddb29f7ca0e69cedea9fb6814f60dd 310 SMART SM00937 30 140 4.3E-55 T 11-10-2018 IPR005139 Peptide chain release factor GO:0006415 VSVS12_02598 5bddb29f7ca0e69cedea9fb6814f60dd 310 Gene3D G3DSA:3.30.70.1660 75 303 1.3E-95 T 11-10-2018 VSVS12_02598 5bddb29f7ca0e69cedea9fb6814f60dd 310 SUPERFAMILY SSF75620 1 309 1.31E-129 T 11-10-2018 VSVS12_02598 5bddb29f7ca0e69cedea9fb6814f60dd 310 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 2 308 1.7E-153 T 11-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 VSVS12_02598 5bddb29f7ca0e69cedea9fb6814f60dd 310 Gene3D G3DSA:1.20.58.410 1 61 8.0E-16 T 11-10-2018 VSVS12_02598 5bddb29f7ca0e69cedea9fb6814f60dd 310 Gene3D G3DSA:3.30.160.20 171 266 1.3E-95 T 11-10-2018 VSVS12_03837 74c4e47bd07ed6311dbbfa099fd8790c 501 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 7 251 3.8E-79 T 11-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 VSVS12_03837 74c4e47bd07ed6311dbbfa099fd8790c 501 SUPERFAMILY SSF53067 6 254 1.4E-91 T 11-10-2018 VSVS12_03837 74c4e47bd07ed6311dbbfa099fd8790c 501 Hamap MF_00186 Glycerol kinase [glpK]. 5 496 55.315 T 11-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 VSVS12_03837 74c4e47bd07ed6311dbbfa099fd8790c 501 PIRSF PIRSF000538 5 501 1.9E-168 T 11-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VSVS12_03837 74c4e47bd07ed6311dbbfa099fd8790c 501 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 6 495 2.0E-218 T 11-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 VSVS12_03837 74c4e47bd07ed6311dbbfa099fd8790c 501 SUPERFAMILY SSF53067 254 495 7.03E-79 T 11-10-2018 VSVS12_03837 74c4e47bd07ed6311dbbfa099fd8790c 501 Gene3D G3DSA:3.30.420.40 4 252 9.4E-107 T 11-10-2018 VSVS12_03837 74c4e47bd07ed6311dbbfa099fd8790c 501 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 137 149 - T 11-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VSVS12_03837 74c4e47bd07ed6311dbbfa099fd8790c 501 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 361 381 - T 11-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 VSVS12_03837 74c4e47bd07ed6311dbbfa099fd8790c 501 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 260 449 1.4E-61 T 11-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 VSVS12_03837 74c4e47bd07ed6311dbbfa099fd8790c 501 Gene3D G3DSA:3.30.420.40 253 499 8.1E-86 T 11-10-2018 VSVS12_00518 13554658a07e3bb3b7ec8b98cb6fbb77 258 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 38 248 5.6E-84 T 11-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 VSVS12_00518 13554658a07e3bb3b7ec8b98cb6fbb77 258 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 26 247 1.5E-89 T 11-10-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 VSVS12_00518 13554658a07e3bb3b7ec8b98cb6fbb77 258 SUPERFAMILY SSF52402 25 213 7.54E-53 T 11-10-2018 VSVS12_00518 13554658a07e3bb3b7ec8b98cb6fbb77 258 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 14 248 38.308 T 11-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 VSVS12_00518 13554658a07e3bb3b7ec8b98cb6fbb77 258 PIRSF PIRSF000857 3 253 1.5E-54 T 11-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 VSVS12_00518 13554658a07e3bb3b7ec8b98cb6fbb77 258 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 53 224 1.9E-46 T 11-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 VSVS12_00518 13554658a07e3bb3b7ec8b98cb6fbb77 258 Gene3D G3DSA:3.40.50.620 7 221 2.9E-63 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VSVS12_04138 607dc5a801e8b1a9e46d6d92c40abb71 465 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 374 464 8.5E-17 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VSVS12_04138 607dc5a801e8b1a9e46d6d92c40abb71 465 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 373 457 7.5E-33 T 11-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 VSVS12_04138 607dc5a801e8b1a9e46d6d92c40abb71 465 Gene3D G3DSA:3.40.50.2300 365 465 5.4E-35 T 11-10-2018 VSVS12_04138 607dc5a801e8b1a9e46d6d92c40abb71 465 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 8 341 6.5E-77 T 11-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 VSVS12_04138 607dc5a801e8b1a9e46d6d92c40abb71 465 SUPERFAMILY SSF52794 372 464 7.06E-30 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VSVS12_02209 52a628693103a7780bb32b0cf94370d8 139 SUPERFAMILY SSF51316 9 135 4.92E-57 T 11-10-2018 IPR011057 Mss4-like superfamily VSVS12_02209 52a628693103a7780bb32b0cf94370d8 139 Pfam PF01641 SelR domain 15 132 1.3E-52 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VSVS12_02209 52a628693103a7780bb32b0cf94370d8 139 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 11 134 37.375 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VSVS12_02209 52a628693103a7780bb32b0cf94370d8 139 Gene3D G3DSA:2.170.150.20 1 137 8.1E-60 T 11-10-2018 VSVS12_02209 52a628693103a7780bb32b0cf94370d8 139 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 10 136 1.2E-54 T 11-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 VSVS12_03026 2b014ca4a301840a876e96fcfacc7674 496 Gene3D G3DSA:1.20.1730.10 9 495 3.7E-97 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily VSVS12_03026 2b014ca4a301840a876e96fcfacc7674 496 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 6 491 4.8E-212 T 11-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 VSVS12_03026 2b014ca4a301840a876e96fcfacc7674 496 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 436 4.6E-93 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VSVS12_03026 2b014ca4a301840a876e96fcfacc7674 496 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 418 438 - T 11-10-2018 IPR018212 Sodium/solute symporter, conserved site VSVS12_03026 2b014ca4a301840a876e96fcfacc7674 496 Pfam PF00474 Sodium:solute symporter family 35 436 2.2E-103 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VSVS12_02674 f0037878ae6278dbbde9938fafd5cd7c 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 7 356 4.6E-162 T 11-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 VSVS12_02674 f0037878ae6278dbbde9938fafd5cd7c 363 Gene3D G3DSA:3.40.718.10 1 363 8.4E-155 T 11-10-2018 VSVS12_02674 f0037878ae6278dbbde9938fafd5cd7c 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 356 6.6E-135 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 VSVS12_02674 f0037878ae6278dbbde9938fafd5cd7c 363 SMART SM01329 7 356 1.0E-199 T 11-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 VSVS12_02674 f0037878ae6278dbbde9938fafd5cd7c 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 6 360 50.766 T 11-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 VSVS12_02674 f0037878ae6278dbbde9938fafd5cd7c 363 SUPERFAMILY SSF53659 4 361 9.79E-122 T 11-10-2018 VSVS12_02674 f0037878ae6278dbbde9938fafd5cd7c 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 248 267 - T 11-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 VSVS12_00427 1160f7cea8686f0b44ade9910c6d0997 264 Hamap MF_00082 Acetylglutamate kinase [argB]. 6 255 42.168 T 11-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VSVS12_00427 1160f7cea8686f0b44ade9910c6d0997 264 Gene3D G3DSA:3.40.1160.10 4 260 8.9E-65 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VSVS12_00427 1160f7cea8686f0b44ade9910c6d0997 264 SUPERFAMILY SSF53633 8 261 3.45E-57 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VSVS12_00427 1160f7cea8686f0b44ade9910c6d0997 264 Pfam PF00696 Amino acid kinase family 9 238 2.7E-35 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VSVS12_00427 1160f7cea8686f0b44ade9910c6d0997 264 TIGRFAM TIGR00761 argB: acetylglutamate kinase 9 234 1.4E-64 T 11-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VSVS12_00427 1160f7cea8686f0b44ade9910c6d0997 264 PIRSF PIRSF000728 1 263 3.9E-68 T 11-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VSVS12_00327 68ccd8b427cede862a053b384804b9e6 399 SUPERFAMILY SSF102645 184 398 4.32E-81 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 VSVS12_00327 68ccd8b427cede862a053b384804b9e6 399 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 186 370 2.3E-75 T 11-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 VSVS12_00327 68ccd8b427cede862a053b384804b9e6 399 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 4 395 2.7E-150 T 11-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 VSVS12_00327 68ccd8b427cede862a053b384804b9e6 399 Gene3D G3DSA:3.40.50.1950 1 185 3.6E-54 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 VSVS12_00327 68ccd8b427cede862a053b384804b9e6 399 SUPERFAMILY SSF52507 1 180 7.59E-60 T 11-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 VSVS12_00327 68ccd8b427cede862a053b384804b9e6 399 Pfam PF02441 Flavoprotein 7 179 2.9E-42 T 11-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 VSVS12_00327 68ccd8b427cede862a053b384804b9e6 399 Gene3D G3DSA:3.40.50.10300 186 399 2.0E-85 T 11-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 VSVS12_03325 50ff9f5fcc4067ea6823610be512602d 295 Gene3D G3DSA:1.10.10.10 3 89 8.8E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_03325 50ff9f5fcc4067ea6823610be512602d 295 SUPERFAMILY SSF46785 6 112 9.26E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_03325 50ff9f5fcc4067ea6823610be512602d 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 5.4E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_03325 50ff9f5fcc4067ea6823610be512602d 295 Pfam PF03466 LysR substrate binding domain 89 294 8.0E-30 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_03325 50ff9f5fcc4067ea6823610be512602d 295 SUPERFAMILY SSF53850 89 294 1.18E-33 T 11-10-2018 VSVS12_03325 50ff9f5fcc4067ea6823610be512602d 295 Gene3D G3DSA:3.40.190.290 91 293 2.6E-50 T 11-10-2018 VSVS12_00760 d25fed8b7416fb864d1dd1ad3e4f75ee 311 Pfam PF06574 FAD synthetase 12 167 1.3E-57 T 11-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 VSVS12_00760 d25fed8b7416fb864d1dd1ad3e4f75ee 311 Pfam PF01687 Riboflavin kinase 184 306 2.1E-37 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 VSVS12_00760 d25fed8b7416fb864d1dd1ad3e4f75ee 311 PIRSF PIRSF004491 1 311 2.2E-105 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 VSVS12_00760 d25fed8b7416fb864d1dd1ad3e4f75ee 311 Gene3D G3DSA:3.40.50.620 1 185 3.4E-60 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VSVS12_00760 d25fed8b7416fb864d1dd1ad3e4f75ee 311 SUPERFAMILY SSF52374 16 175 4.07E-36 T 11-10-2018 VSVS12_00760 d25fed8b7416fb864d1dd1ad3e4f75ee 311 Gene3D G3DSA:2.40.30.30 186 311 1.3E-38 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 VSVS12_00760 d25fed8b7416fb864d1dd1ad3e4f75ee 311 SUPERFAMILY SSF82114 174 309 1.46E-44 T 11-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 VSVS12_00760 d25fed8b7416fb864d1dd1ad3e4f75ee 311 SMART SM00904 183 307 4.4E-61 T 11-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 VSVS12_00760 d25fed8b7416fb864d1dd1ad3e4f75ee 311 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 307 2.0E-106 T 11-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 VSVS12_02314 05478cbe1b33dd13ff11d01a88dc2c4e 380 Pfam PF07196 Flagellin hook IN motif 199 251 4.4E-12 T 11-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VSVS12_02314 05478cbe1b33dd13ff11d01a88dc2c4e 380 PRINTS PR00207 Flagellin signature 111 134 2.1E-27 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VSVS12_02314 05478cbe1b33dd13ff11d01a88dc2c4e 380 PRINTS PR00207 Flagellin signature 76 95 2.1E-27 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VSVS12_02314 05478cbe1b33dd13ff11d01a88dc2c4e 380 PRINTS PR00207 Flagellin signature 37 54 2.1E-27 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VSVS12_02314 05478cbe1b33dd13ff11d01a88dc2c4e 380 SUPERFAMILY SSF64518 1 379 1.09E-98 T 11-10-2018 VSVS12_02314 05478cbe1b33dd13ff11d01a88dc2c4e 380 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 9.2E-42 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VSVS12_02314 05478cbe1b33dd13ff11d01a88dc2c4e 380 Pfam PF00700 Bacterial flagellin C-terminal helical region 295 379 1.6E-25 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VSVS12_02314 05478cbe1b33dd13ff11d01a88dc2c4e 380 Gene3D G3DSA:1.10.8.410 331 379 2.6E-20 T 11-10-2018 VSVS12_02314 05478cbe1b33dd13ff11d01a88dc2c4e 380 Gene3D G3DSA:1.20.1330.10 44 330 2.5E-77 T 11-10-2018 VSVS12_02314 05478cbe1b33dd13ff11d01a88dc2c4e 380 Gene3D G3DSA:3.30.70.2120 174 278 2.5E-77 T 11-10-2018 VSVS12_00663 86ec15df42af6d008a1631db21947031 298 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 6 298 55.691 T 11-10-2018 IPR023009 Tyrosine recombinase XerC/XerD VSVS12_00663 86ec15df42af6d008a1631db21947031 298 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 8 90 3.9E-19 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VSVS12_00663 86ec15df42af6d008a1631db21947031 298 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 4 298 61.282 T 11-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 VSVS12_00663 86ec15df42af6d008a1631db21947031 298 SUPERFAMILY SSF56349 8 289 2.09E-56 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VSVS12_00663 86ec15df42af6d008a1631db21947031 298 Gene3D G3DSA:1.10.443.10 110 292 1.9E-72 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VSVS12_00663 86ec15df42af6d008a1631db21947031 298 Gene3D G3DSA:1.10.150.130 4 98 4.9E-23 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal VSVS12_00663 86ec15df42af6d008a1631db21947031 298 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 9 298 2.5E-116 T 11-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 VSVS12_00663 86ec15df42af6d008a1631db21947031 298 Pfam PF00589 Phage integrase family 113 284 2.2E-52 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VSVS12_03075 11bf18d8c8d7a4da6a94d35db51233ef 293 Pfam PF03466 LysR substrate binding domain 92 276 1.9E-10 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_03075 11bf18d8c8d7a4da6a94d35db51233ef 293 Gene3D G3DSA:3.40.190.10 83 179 3.6E-5 T 11-10-2018 VSVS12_03075 11bf18d8c8d7a4da6a94d35db51233ef 293 Gene3D G3DSA:1.10.10.10 1 82 2.1E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_03075 11bf18d8c8d7a4da6a94d35db51233ef 293 SUPERFAMILY SSF46785 1 81 2.49E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_03075 11bf18d8c8d7a4da6a94d35db51233ef 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 1.5E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_03075 11bf18d8c8d7a4da6a94d35db51233ef 293 SUPERFAMILY SSF53850 90 278 4.34E-16 T 11-10-2018 VSVS12_03075 11bf18d8c8d7a4da6a94d35db51233ef 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.4E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_03075 11bf18d8c8d7a4da6a94d35db51233ef 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.4E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_03075 11bf18d8c8d7a4da6a94d35db51233ef 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.4E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_00274 3976ac9817f933f33d0e320c25cedaa6 844 Pfam PF00990 Diguanylate cyclase, GGDEF domain 426 571 3.7E-27 T 11-10-2018 IPR000160 GGDEF domain VSVS12_00274 3976ac9817f933f33d0e320c25cedaa6 844 Pfam PF02743 Cache domain 78 264 2.5E-14 T 11-10-2018 IPR033479 Double Cache domain 1 VSVS12_00274 3976ac9817f933f33d0e320c25cedaa6 844 Gene3D G3DSA:3.20.20.450 590 841 5.1E-92 T 11-10-2018 IPR035919 EAL domain superfamily VSVS12_00274 3976ac9817f933f33d0e320c25cedaa6 844 Pfam PF00563 EAL domain 594 830 3.9E-72 T 11-10-2018 IPR001633 EAL domain VSVS12_00274 3976ac9817f933f33d0e320c25cedaa6 844 Gene3D G3DSA:1.20.1480.50 327 421 2.0E-8 T 11-10-2018 VSVS12_00274 3976ac9817f933f33d0e320c25cedaa6 844 SUPERFAMILY SSF55073 429 570 1.18E-28 T 11-10-2018 IPR029787 Nucleotide cyclase VSVS12_00274 3976ac9817f933f33d0e320c25cedaa6 844 Gene3D G3DSA:3.30.70.270 422 589 2.1E-32 T 11-10-2018 VSVS12_00274 3976ac9817f933f33d0e320c25cedaa6 844 Gene3D G3DSA:3.30.450.20 34 225 1.8E-13 T 11-10-2018 VSVS12_00274 3976ac9817f933f33d0e320c25cedaa6 844 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 421 570 7.9E-23 T 11-10-2018 IPR000160 GGDEF domain VSVS12_00274 3976ac9817f933f33d0e320c25cedaa6 844 SUPERFAMILY SSF141868 595 841 5.1E-85 T 11-10-2018 IPR035919 EAL domain superfamily VSVS12_00274 3976ac9817f933f33d0e320c25cedaa6 844 SMART SM00267 413 575 3.1E-24 T 11-10-2018 IPR000160 GGDEF domain VSVS12_00274 3976ac9817f933f33d0e320c25cedaa6 844 SUPERFAMILY SSF158472 366 414 3.14E-6 T 11-10-2018 VSVS12_00274 3976ac9817f933f33d0e320c25cedaa6 844 SMART SM00304 365 418 8.6E-5 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_00274 3976ac9817f933f33d0e320c25cedaa6 844 SMART SM00052 587 835 6.8E-107 T 11-10-2018 IPR001633 EAL domain VSVS12_00353 01495016c3c6a8d15fb6d7e1a1589ccc 352 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 70 325 6.0E-70 T 11-10-2018 IPR002201 Glycosyl transferase, family 9 GO:0016757 VSVS12_00353 01495016c3c6a8d15fb6d7e1a1589ccc 352 SUPERFAMILY SSF53756 2 344 5.34E-96 T 11-10-2018 VSVS12_00353 01495016c3c6a8d15fb6d7e1a1589ccc 352 Gene3D G3DSA:3.40.50.2000 2 151 6.4E-56 T 11-10-2018 VSVS12_00353 01495016c3c6a8d15fb6d7e1a1589ccc 352 Gene3D G3DSA:3.40.50.2000 166 347 4.7E-57 T 11-10-2018 VSVS12_00353 01495016c3c6a8d15fb6d7e1a1589ccc 352 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 3 345 1.2E-145 T 11-10-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 VSVS12_00953 5f0e8e8dfd8717a36bd841ba0fecd486 634 PRINTS PR00775 90kDa heat shock protein signature 195 213 9.5E-63 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VSVS12_00953 5f0e8e8dfd8717a36bd841ba0fecd486 634 PRINTS PR00775 90kDa heat shock protein signature 31 53 9.5E-63 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VSVS12_00953 5f0e8e8dfd8717a36bd841ba0fecd486 634 PRINTS PR00775 90kDa heat shock protein signature 98 115 9.5E-63 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VSVS12_00953 5f0e8e8dfd8717a36bd841ba0fecd486 634 PRINTS PR00775 90kDa heat shock protein signature 10 30 9.5E-63 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VSVS12_00953 5f0e8e8dfd8717a36bd841ba0fecd486 634 PRINTS PR00775 90kDa heat shock protein signature 125 147 9.5E-63 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VSVS12_00953 5f0e8e8dfd8717a36bd841ba0fecd486 634 PRINTS PR00775 90kDa heat shock protein signature 177 194 9.5E-63 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VSVS12_00953 5f0e8e8dfd8717a36bd841ba0fecd486 634 PRINTS PR00775 90kDa heat shock protein signature 80 97 9.5E-63 T 11-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal VSVS12_00953 5f0e8e8dfd8717a36bd841ba0fecd486 634 SMART SM00387 32 189 1.1E-6 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_00953 5f0e8e8dfd8717a36bd841ba0fecd486 634 Gene3D G3DSA:1.20.120.790 501 632 5.3E-42 T 11-10-2018 IPR037196 HSP90, C-terminal domain VSVS12_00953 5f0e8e8dfd8717a36bd841ba0fecd486 634 Pfam PF00183 Hsp90 protein 221 633 6.2E-128 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 VSVS12_00953 5f0e8e8dfd8717a36bd841ba0fecd486 634 SUPERFAMILY SSF110942 520 632 5.89E-34 T 11-10-2018 IPR037196 HSP90, C-terminal domain VSVS12_00953 5f0e8e8dfd8717a36bd841ba0fecd486 634 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 30 39 - T 11-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 VSVS12_00953 5f0e8e8dfd8717a36bd841ba0fecd486 634 Gene3D G3DSA:3.30.230.80 237 409 3.7E-69 T 11-10-2018 VSVS12_00953 5f0e8e8dfd8717a36bd841ba0fecd486 634 Gene3D G3DSA:3.30.565.10 1 234 5.9E-76 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_00953 5f0e8e8dfd8717a36bd841ba0fecd486 634 SUPERFAMILY SSF55874 10 220 1.05E-63 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_00953 5f0e8e8dfd8717a36bd841ba0fecd486 634 SUPERFAMILY SSF54211 238 493 1.06E-98 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VSVS12_00953 5f0e8e8dfd8717a36bd841ba0fecd486 634 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 187 1.7E-13 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_00953 5f0e8e8dfd8717a36bd841ba0fecd486 634 Gene3D G3DSA:3.40.50.11260 410 500 1.5E-34 T 11-10-2018 VSVS12_00953 5f0e8e8dfd8717a36bd841ba0fecd486 634 Hamap MF_00505 Chaperone protein HtpG [htpG]. 7 632 32.248 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 VSVS12_00953 5f0e8e8dfd8717a36bd841ba0fecd486 634 PIRSF PIRSF002583 1 634 2.6E-213 T 11-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 VSVS12_00540 cbbe9a6357cbfb185ad08b765678e107 241 SMART SM00382 28 231 4.1E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_00540 cbbe9a6357cbfb185ad08b765678e107 241 Pfam PF00005 ABC transporter 20 166 2.0E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_00540 cbbe9a6357cbfb185ad08b765678e107 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_00540 cbbe9a6357cbfb185ad08b765678e107 241 Gene3D G3DSA:3.40.50.300 2 241 4.0E-70 T 11-10-2018 VSVS12_00540 cbbe9a6357cbfb185ad08b765678e107 241 SUPERFAMILY SSF52540 3 237 2.48E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00540 cbbe9a6357cbfb185ad08b765678e107 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 215 236 5.1E-9 T 11-10-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal VSVS12_00540 cbbe9a6357cbfb185ad08b765678e107 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 4 241 1.1E-125 T 11-10-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 VSVS12_01086 46ee2f35bb8bb9f0b6179add0ed42aa1 540 Gene3D G3DSA:3.30.70.270 369 539 3.7E-48 T 11-10-2018 VSVS12_01086 46ee2f35bb8bb9f0b6179add0ed42aa1 540 Pfam PF00990 Diguanylate cyclase, GGDEF domain 375 532 1.1E-41 T 11-10-2018 IPR000160 GGDEF domain VSVS12_01086 46ee2f35bb8bb9f0b6179add0ed42aa1 540 SUPERFAMILY SSF103190 224 328 2.67E-9 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VSVS12_01086 46ee2f35bb8bb9f0b6179add0ed42aa1 540 Gene3D G3DSA:3.30.450.20 85 220 5.6E-44 T 11-10-2018 VSVS12_01086 46ee2f35bb8bb9f0b6179add0ed42aa1 540 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 374 536 1.6E-38 T 11-10-2018 IPR000160 GGDEF domain VSVS12_01086 46ee2f35bb8bb9f0b6179add0ed42aa1 540 SUPERFAMILY SSF103190 44 219 5.1E-47 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VSVS12_01086 46ee2f35bb8bb9f0b6179add0ed42aa1 540 SMART SM00267 364 537 7.6E-47 T 11-10-2018 IPR000160 GGDEF domain VSVS12_01086 46ee2f35bb8bb9f0b6179add0ed42aa1 540 SUPERFAMILY SSF55073 380 537 5.26E-43 T 11-10-2018 IPR029787 Nucleotide cyclase VSVS12_01086 46ee2f35bb8bb9f0b6179add0ed42aa1 540 Pfam PF02743 Cache domain 46 322 1.7E-13 T 11-10-2018 IPR033479 Double Cache domain 1 VSVS12_02097 ce0d28207cd4908e422bf48f64c4756b 988 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 580 597 0.1 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_02097 ce0d28207cd4908e422bf48f64c4756b 988 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 45 60 11.0 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_02097 ce0d28207cd4908e422bf48f64c4756b 988 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 80 96 2.2 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_02097 ce0d28207cd4908e422bf48f64c4756b 988 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 801 813 1.0 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_02097 ce0d28207cd4908e422bf48f64c4756b 988 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 834 847 8.5 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_02097 ce0d28207cd4908e422bf48f64c4756b 988 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 98 109 33.0 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_02097 ce0d28207cd4908e422bf48f64c4756b 988 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 565 579 0.031 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_02097 ce0d28207cd4908e422bf48f64c4756b 988 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 815 831 0.092 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_02097 ce0d28207cd4908e422bf48f64c4756b 988 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 340 357 5.4 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_02097 ce0d28207cd4908e422bf48f64c4756b 988 Pfam PF00353 Haemolysin-type calcium-binding repeat (2 copies) 62 77 25.0 T 11-10-2018 IPR001343 Haemolysin-type calcium-binding repeat GO:0005509 VSVS12_02097 ce0d28207cd4908e422bf48f64c4756b 988 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 577 595 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VSVS12_02097 ce0d28207cd4908e422bf48f64c4756b 988 Gene3D G3DSA:2.150.10.10 554 653 1.2E-10 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_02097 ce0d28207cd4908e422bf48f64c4756b 988 Gene3D G3DSA:2.150.10.10 12 152 1.7E-12 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_02097 ce0d28207cd4908e422bf48f64c4756b 988 SUPERFAMILY SSF51120 29 155 5.76E-16 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_02097 ce0d28207cd4908e422bf48f64c4756b 988 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 568 586 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VSVS12_02097 ce0d28207cd4908e422bf48f64c4756b 988 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 802 820 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VSVS12_02097 ce0d28207cd4908e422bf48f64c4756b 988 SUPERFAMILY SSF51120 765 879 8.89E-9 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_02097 ce0d28207cd4908e422bf48f64c4756b 988 PRINTS PR00313 NodO calcium binding signature 590 598 3.8E-8 T 11-10-2018 VSVS12_02097 ce0d28207cd4908e422bf48f64c4756b 988 PRINTS PR00313 NodO calcium binding signature 569 580 3.8E-8 T 11-10-2018 VSVS12_02097 ce0d28207cd4908e422bf48f64c4756b 988 PRINTS PR00313 NodO calcium binding signature 841 850 3.8E-8 T 11-10-2018 VSVS12_02097 ce0d28207cd4908e422bf48f64c4756b 988 PRINTS PR00313 NodO calcium binding signature 806 814 3.8E-8 T 11-10-2018 VSVS12_02097 ce0d28207cd4908e422bf48f64c4756b 988 Gene3D G3DSA:2.150.10.10 767 909 5.2E-13 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_01107 750f12a97e66644f95f9f9ae4c4e7c36 74 Gene3D G3DSA:1.10.3390.10 1 74 4.0E-30 T 11-10-2018 IPR023202 YejL-like superfamily VSVS12_01107 750f12a97e66644f95f9f9ae4c4e7c36 74 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 3.0E-24 T 11-10-2018 IPR009857 Uncharacterised protein family UPF0352 VSVS12_01107 750f12a97e66644f95f9f9ae4c4e7c36 74 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 22.099 T 11-10-2018 IPR009857 Uncharacterised protein family UPF0352 VSVS12_01107 750f12a97e66644f95f9f9ae4c4e7c36 74 PIRSF PIRSF006188 1 72 2.7E-33 T 11-10-2018 IPR009857 Uncharacterised protein family UPF0352 VSVS12_01107 750f12a97e66644f95f9f9ae4c4e7c36 74 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 7.8E-20 T 11-10-2018 IPR009857 Uncharacterised protein family UPF0352 VSVS12_01107 750f12a97e66644f95f9f9ae4c4e7c36 74 SUPERFAMILY SSF158651 1 72 1.96E-28 T 11-10-2018 IPR023202 YejL-like superfamily VSVS12_00593 2252bce6df685585afac9ccf7e82cf26 311 SUPERFAMILY SSF160246 4 145 2.88E-38 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily VSVS12_00593 2252bce6df685585afac9ccf7e82cf26 311 Pfam PF00437 Type II/IV secretion system protein 190 287 1.2E-15 T 11-10-2018 IPR001482 Type II/IV secretion system protein VSVS12_00593 2252bce6df685585afac9ccf7e82cf26 311 Gene3D G3DSA:3.30.300.160 63 145 7.6E-6 T 11-10-2018 VSVS12_00593 2252bce6df685585afac9ccf7e82cf26 311 Pfam PF05157 Type II secretion system (T2SS), protein E, N-terminal domain 42 148 7.0E-22 T 11-10-2018 IPR007831 General secretory system II, protein E, N-terminal VSVS12_00593 2252bce6df685585afac9ccf7e82cf26 311 SUPERFAMILY SSF52540 170 287 1.46E-23 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00593 2252bce6df685585afac9ccf7e82cf26 311 Gene3D G3DSA:3.30.450.90 147 286 9.6E-44 T 11-10-2018 VSVS12_02526 fca7f5947f2c8899c278bd73f6f172c0 695 SMART SM00889 477 595 6.1E-60 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VSVS12_02526 fca7f5947f2c8899c278bd73f6f172c0 695 Gene3D G3DSA:3.30.70.240 601 671 1.3E-80 T 11-10-2018 VSVS12_02526 fca7f5947f2c8899c278bd73f6f172c0 695 TIGRFAM TIGR00484 EF-G: translation elongation factor G 2 689 8.6E-292 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VSVS12_02526 fca7f5947f2c8899c278bd73f6f172c0 695 SUPERFAMILY SSF54980 401 478 1.19E-20 T 11-10-2018 IPR035647 EF-G domain III/V-like VSVS12_02526 fca7f5947f2c8899c278bd73f6f172c0 695 Pfam PF14492 Elongation Factor G, domain II 401 474 3.8E-29 T 11-10-2018 VSVS12_02526 fca7f5947f2c8899c278bd73f6f172c0 695 Gene3D G3DSA:2.40.30.10 293 413 1.3E-43 T 11-10-2018 VSVS12_02526 fca7f5947f2c8899c278bd73f6f172c0 695 Gene3D G3DSA:3.30.230.10 481 684 1.3E-80 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VSVS12_02526 fca7f5947f2c8899c278bd73f6f172c0 695 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 173 1.2E-23 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VSVS12_02526 fca7f5947f2c8899c278bd73f6f172c0 695 PRINTS PR00315 GTP-binding elongation factor signature 9 22 4.4E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_02526 fca7f5947f2c8899c278bd73f6f172c0 695 PRINTS PR00315 GTP-binding elongation factor signature 75 85 4.4E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_02526 fca7f5947f2c8899c278bd73f6f172c0 695 PRINTS PR00315 GTP-binding elongation factor signature 55 63 4.4E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_02526 fca7f5947f2c8899c278bd73f6f172c0 695 PRINTS PR00315 GTP-binding elongation factor signature 127 136 4.4E-14 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_02526 fca7f5947f2c8899c278bd73f6f172c0 695 SMART SM00838 597 684 1.2E-45 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like VSVS12_02526 fca7f5947f2c8899c278bd73f6f172c0 695 Pfam PF00679 Elongation factor G C-terminus 597 683 9.2E-29 T 11-10-2018 IPR000640 Elongation factor EFG, domain V-like VSVS12_02526 fca7f5947f2c8899c278bd73f6f172c0 695 Gene3D G3DSA:3.30.70.870 430 480 1.9E-20 T 11-10-2018 VSVS12_02526 fca7f5947f2c8899c278bd73f6f172c0 695 SUPERFAMILY SSF54980 600 689 3.45E-29 T 11-10-2018 IPR035647 EF-G domain III/V-like VSVS12_02526 fca7f5947f2c8899c278bd73f6f172c0 695 SUPERFAMILY SSF50447 261 399 4.86E-32 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VSVS12_02526 fca7f5947f2c8899c278bd73f6f172c0 695 SUPERFAMILY SSF52540 3 278 5.85E-100 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02526 fca7f5947f2c8899c278bd73f6f172c0 695 Pfam PF00009 Elongation factor Tu GTP binding domain 6 278 5.7E-60 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_02526 fca7f5947f2c8899c278bd73f6f172c0 695 Pfam PF03764 Elongation factor G, domain IV 476 594 1.4E-42 T 11-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 VSVS12_02526 fca7f5947f2c8899c278bd73f6f172c0 695 Pfam PF03144 Elongation factor Tu domain 2 321 388 4.0E-16 T 11-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 VSVS12_02526 fca7f5947f2c8899c278bd73f6f172c0 695 Gene3D G3DSA:3.40.50.300 1 290 2.6E-101 T 11-10-2018 VSVS12_02526 fca7f5947f2c8899c278bd73f6f172c0 695 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 48 63 - T 11-10-2018 IPR031157 Tr-type G domain, conserved site VSVS12_02526 fca7f5947f2c8899c278bd73f6f172c0 695 Hamap MF_00054_B Elongation factor G [fusA]. 3 688 101.993 T 11-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VSVS12_02526 fca7f5947f2c8899c278bd73f6f172c0 695 SUPERFAMILY SSF54211 476 595 9.1E-39 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VSVS12_02741 f290251df638a294779f9980c98ba2e2 521 Gene3D G3DSA:3.30.590.20 17 521 1.0E-188 T 11-10-2018 VSVS12_02741 f290251df638a294779f9980c98ba2e2 521 SUPERFAMILY SSF55931 8 513 1.18E-195 T 11-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 VSVS12_02741 f290251df638a294779f9980c98ba2e2 521 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 521 213.85 T 11-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 VSVS12_02741 f290251df638a294779f9980c98ba2e2 521 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 8 515 1.4E-208 T 11-10-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 VSVS12_02741 f290251df638a294779f9980c98ba2e2 521 Pfam PF04262 Glutamate-cysteine ligase 14 378 8.7E-164 T 11-10-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 VSVS12_02924 9ee54370517714078e1300c95ee745f6 351 SUPERFAMILY SSF52540 113 336 1.4E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02924 9ee54370517714078e1300c95ee745f6 351 Gene3D G3DSA:2.40.50.140 35 101 1.5E-21 T 11-10-2018 VSVS12_02924 9ee54370517714078e1300c95ee745f6 351 Gene3D G3DSA:3.40.50.300 102 273 3.7E-47 T 11-10-2018 VSVS12_02924 9ee54370517714078e1300c95ee745f6 351 Pfam PF03193 RsgA GTPase 99 274 1.0E-54 T 11-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 VSVS12_02924 9ee54370517714078e1300c95ee745f6 351 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 74 332 4.8E-85 T 11-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 VSVS12_02924 9ee54370517714078e1300c95ee745f6 351 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 40 338 36.61 T 11-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 VSVS12_02924 9ee54370517714078e1300c95ee745f6 351 Gene3D G3DSA:1.10.40.50 274 348 3.9E-25 T 11-10-2018 VSVS12_02783 8f3b8ccf7c28456145ce8ff7674b28dc 93 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 35.018 T 11-10-2018 IPR023081 Cell division protein FtsB VSVS12_02783 8f3b8ccf7c28456145ce8ff7674b28dc 93 Gene3D G3DSA:1.20.5.400 22 63 2.0E-8 T 11-10-2018 VSVS12_02783 8f3b8ccf7c28456145ce8ff7674b28dc 93 Pfam PF04977 Septum formation initiator 11 88 5.3E-25 T 11-10-2018 IPR007060 Septum formation initiator FtsL/DivIC VSVS12_04251 05786e8bf8cc784274284423c22993a5 320 SMART SM01321 13 187 0.0014 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 VSVS12_04251 05786e8bf8cc784274284423c22993a5 320 SUPERFAMILY SSF143422 16 192 2.22E-19 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 VSVS12_03825 c604ac4e8b02fa0b583a0613cf71496d 139 Pfam PF04143 Sulphur transport 5 128 7.0E-8 T 11-10-2018 IPR007272 Sulphur transport domain VSVS12_01975 51e5e1a58b6d9d11caf9ae9868c11ce2 342 SUPERFAMILY SSF58104 58 334 9.55E-51 T 11-10-2018 VSVS12_01975 51e5e1a58b6d9d11caf9ae9868c11ce2 342 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 150 301 7.0E-29 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_01975 51e5e1a58b6d9d11caf9ae9868c11ce2 342 Gene3D G3DSA:1.10.287.950 52 341 2.4E-47 T 11-10-2018 VSVS12_01975 51e5e1a58b6d9d11caf9ae9868c11ce2 342 SMART SM00283 77 331 5.1E-27 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_00358 75c52f75e60c8960401cc21fd586b4ce 353 Pfam PF01565 FAD binding domain 23 148 3.3E-19 T 11-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 VSVS12_00358 75c52f75e60c8960401cc21fd586b4ce 353 SUPERFAMILY SSF56176 9 199 3.01E-41 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VSVS12_00358 75c52f75e60c8960401cc21fd586b4ce 353 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 209 331 3.3E-33 T 11-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VSVS12_00358 75c52f75e60c8960401cc21fd586b4ce 353 SUPERFAMILY SSF56194 206 342 1.83E-48 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VSVS12_00358 75c52f75e60c8960401cc21fd586b4ce 353 Gene3D G3DSA:3.30.465.10 73 222 5.9E-54 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 VSVS12_00358 75c52f75e60c8960401cc21fd586b4ce 353 Gene3D G3DSA:3.30.43.10 1 72 2.9E-21 T 11-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 VSVS12_00358 75c52f75e60c8960401cc21fd586b4ce 353 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 353 84.73 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VSVS12_00358 75c52f75e60c8960401cc21fd586b4ce 353 Gene3D G3DSA:3.90.78.10 223 347 1.2E-44 T 11-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VSVS12_00358 75c52f75e60c8960401cc21fd586b4ce 353 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 9 333 7.0E-96 T 11-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 VSVS12_02640 e3cd4283e47dbbd5eb289364a7435f58 546 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 3.0E-260 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 VSVS12_02640 e3cd4283e47dbbd5eb289364a7435f58 546 Gene3D G3DSA:3.40.50.880 286 543 7.3E-106 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like VSVS12_02640 e3cd4283e47dbbd5eb289364a7435f58 546 Pfam PF06418 CTP synthase N-terminus 5 265 2.3E-125 T 11-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 VSVS12_02640 e3cd4283e47dbbd5eb289364a7435f58 546 Gene3D G3DSA:3.40.50.300 1 285 4.5E-133 T 11-10-2018 VSVS12_02640 e3cd4283e47dbbd5eb289364a7435f58 546 Pfam PF00117 Glutamine amidotransferase class-I 301 535 2.9E-63 T 11-10-2018 IPR017926 Glutamine amidotransferase VSVS12_02640 e3cd4283e47dbbd5eb289364a7435f58 546 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.233 T 11-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 VSVS12_02640 e3cd4283e47dbbd5eb289364a7435f58 546 SUPERFAMILY SSF52317 289 539 1.5E-88 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like VSVS12_02640 e3cd4283e47dbbd5eb289364a7435f58 546 SUPERFAMILY SSF52540 3 268 1.84E-121 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02063 b2b38dcca11d5adfebacc6afa6d44c75 433 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 424 41.803 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VSVS12_02063 b2b38dcca11d5adfebacc6afa6d44c75 433 PRINTS PR00083 Histidinol dehydrogenase signature 165 191 1.7E-102 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VSVS12_02063 b2b38dcca11d5adfebacc6afa6d44c75 433 PRINTS PR00083 Histidinol dehydrogenase signature 358 376 1.7E-102 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VSVS12_02063 b2b38dcca11d5adfebacc6afa6d44c75 433 PRINTS PR00083 Histidinol dehydrogenase signature 317 342 1.7E-102 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VSVS12_02063 b2b38dcca11d5adfebacc6afa6d44c75 433 PRINTS PR00083 Histidinol dehydrogenase signature 195 220 1.7E-102 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VSVS12_02063 b2b38dcca11d5adfebacc6afa6d44c75 433 PRINTS PR00083 Histidinol dehydrogenase signature 134 160 1.7E-102 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VSVS12_02063 b2b38dcca11d5adfebacc6afa6d44c75 433 PRINTS PR00083 Histidinol dehydrogenase signature 227 248 1.7E-102 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VSVS12_02063 b2b38dcca11d5adfebacc6afa6d44c75 433 PRINTS PR00083 Histidinol dehydrogenase signature 249 268 1.7E-102 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VSVS12_02063 b2b38dcca11d5adfebacc6afa6d44c75 433 PRINTS PR00083 Histidinol dehydrogenase signature 33 57 1.7E-102 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VSVS12_02063 b2b38dcca11d5adfebacc6afa6d44c75 433 SUPERFAMILY SSF53720 3 424 3.53E-92 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VSVS12_02063 b2b38dcca11d5adfebacc6afa6d44c75 433 Gene3D G3DSA:3.40.50.1980 231 346 1.4E-124 T 11-10-2018 VSVS12_02063 b2b38dcca11d5adfebacc6afa6d44c75 433 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 227 259 - T 11-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 VSVS12_02063 b2b38dcca11d5adfebacc6afa6d44c75 433 Gene3D G3DSA:3.40.50.1980 30 229 1.4E-124 T 11-10-2018 VSVS12_02063 b2b38dcca11d5adfebacc6afa6d44c75 433 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 33 423 2.4E-165 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VSVS12_02063 b2b38dcca11d5adfebacc6afa6d44c75 433 PIRSF PIRSF000099 1 427 1.7E-167 T 11-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VSVS12_02063 b2b38dcca11d5adfebacc6afa6d44c75 433 Pfam PF00815 Histidinol dehydrogenase 27 424 3.6E-170 T 11-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 VSVS12_00893 b9ee40948d5e94675aa2501334462c66 815 Pfam PF09317 Domain of unknown function (DUF1974) 515 796 2.5E-113 T 11-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 VSVS12_00893 b9ee40948d5e94675aa2501334462c66 815 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 142 233 1.1E-15 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 VSVS12_00893 b9ee40948d5e94675aa2501334462c66 815 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 361 508 1.8E-14 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VSVS12_00893 b9ee40948d5e94675aa2501334462c66 815 Gene3D G3DSA:1.10.540.10 123 236 3.2E-99 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 VSVS12_00893 b9ee40948d5e94675aa2501334462c66 815 Gene3D G3DSA:1.20.140.10 361 508 3.2E-99 T 11-10-2018 VSVS12_00893 b9ee40948d5e94675aa2501334462c66 815 SUPERFAMILY SSF47203 361 508 3.7E-24 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 VSVS12_00893 b9ee40948d5e94675aa2501334462c66 815 Gene3D G3DSA:2.40.110.10 237 360 3.2E-99 T 11-10-2018 VSVS12_00893 b9ee40948d5e94675aa2501334462c66 815 SUPERFAMILY SSF56645 122 356 1.57E-41 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 VSVS12_03272 ca6d5c1a41556689ab8527525ba5ddf4 214 SUPERFAMILY SSF69593 8 203 1.23E-26 T 11-10-2018 VSVS12_03272 ca6d5c1a41556689ab8527525ba5ddf4 214 Pfam PF01553 Acyltransferase 24 156 3.9E-20 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VSVS12_03272 ca6d5c1a41556689ab8527525ba5ddf4 214 SMART SM00563 37 159 1.1E-25 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VSVS12_00460 9e232e6036d30f0dcb9fa78d442e8d5c 202 Gene3D G3DSA:3.40.50.360 14 186 1.6E-54 T 11-10-2018 IPR029039 Flavoprotein-like superfamily VSVS12_00460 9e232e6036d30f0dcb9fa78d442e8d5c 202 SUPERFAMILY SSF52218 15 185 1.05E-48 T 11-10-2018 IPR029039 Flavoprotein-like superfamily VSVS12_00460 9e232e6036d30f0dcb9fa78d442e8d5c 202 Pfam PF02525 Flavodoxin-like fold 15 181 5.0E-43 T 11-10-2018 IPR003680 Flavodoxin-like fold VSVS12_00460 9e232e6036d30f0dcb9fa78d442e8d5c 202 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 10 196 48.54 T 11-10-2018 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 VSVS12_03789 ad9260ea6019b9bfb287ff11a8ad226d 316 TIGRFAM TIGR00874 talAB: transaldolase 3 316 3.8E-153 T 11-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VSVS12_03789 ad9260ea6019b9bfb287ff11a8ad226d 316 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 312 2.5E-99 T 11-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VSVS12_03789 ad9260ea6019b9bfb287ff11a8ad226d 316 Gene3D G3DSA:3.20.20.70 2 316 1.9E-137 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_03789 ad9260ea6019b9bfb287ff11a8ad226d 316 SUPERFAMILY SSF51569 1 315 2.2E-111 T 11-10-2018 VSVS12_03789 ad9260ea6019b9bfb287ff11a8ad226d 316 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 11-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VSVS12_03789 ad9260ea6019b9bfb287ff11a8ad226d 316 Hamap MF_00492 Transaldolase [tal]. 2 316 50.461 T 11-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VSVS12_03789 ad9260ea6019b9bfb287ff11a8ad226d 316 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 11-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VSVS12_00114 fb40aa46d386e9dd545e4196fe7251b7 296 Gene3D G3DSA:3.40.190.10 81 182 4.4E-17 T 11-10-2018 VSVS12_00114 fb40aa46d386e9dd545e4196fe7251b7 296 Gene3D G3DSA:1.10.10.10 1 80 3.8E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_00114 fb40aa46d386e9dd545e4196fe7251b7 296 SUPERFAMILY SSF53850 87 293 3.74E-32 T 11-10-2018 VSVS12_00114 fb40aa46d386e9dd545e4196fe7251b7 296 SUPERFAMILY SSF46785 1 86 9.79E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_00114 fb40aa46d386e9dd545e4196fe7251b7 296 Gene3D G3DSA:3.40.190.10 183 263 1.0E-9 T 11-10-2018 VSVS12_00114 fb40aa46d386e9dd545e4196fe7251b7 296 Pfam PF03466 LysR substrate binding domain 87 292 1.1E-37 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_00114 fb40aa46d386e9dd545e4196fe7251b7 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 1.5E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_03608 df0c68303d98dc291a238b0586b9232e 163 Pfam PF01047 MarR family 52 112 2.8E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VSVS12_03608 df0c68303d98dc291a238b0586b9232e 163 Gene3D G3DSA:1.10.10.10 1 161 4.0E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_03608 df0c68303d98dc291a238b0586b9232e 163 SMART SM00347 44 147 1.9E-22 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VSVS12_03608 df0c68303d98dc291a238b0586b9232e 163 ProSitePatterns PS01117 MarR-type HTH domain signature. 86 120 - T 11-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site VSVS12_03608 df0c68303d98dc291a238b0586b9232e 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 103 4.5E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VSVS12_03608 df0c68303d98dc291a238b0586b9232e 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 87 4.5E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VSVS12_03608 df0c68303d98dc291a238b0586b9232e 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 137 157 4.5E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VSVS12_03608 df0c68303d98dc291a238b0586b9232e 163 PRINTS PR00598 Bacterial regulatory protein MarR family signature 107 123 4.5E-10 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VSVS12_03608 df0c68303d98dc291a238b0586b9232e 163 SUPERFAMILY SSF46785 12 158 7.49E-31 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_01007 e4baa7932d17c97cf6411e64b4426a3c 419 SUPERFAMILY SSF51735 161 313 2.89E-39 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_01007 e4baa7932d17c97cf6411e64b4426a3c 419 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 97 120 - T 11-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VSVS12_01007 e4baa7932d17c97cf6411e64b4426a3c 419 SUPERFAMILY SSF69075 315 416 2.75E-26 T 11-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VSVS12_01007 e4baa7932d17c97cf6411e64b4426a3c 419 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 154 1.0E-50 T 11-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VSVS12_01007 e4baa7932d17c97cf6411e64b4426a3c 419 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 170 304 2.2E-50 T 11-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase VSVS12_01007 e4baa7932d17c97cf6411e64b4426a3c 419 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 415 5.7E-142 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VSVS12_01007 e4baa7932d17c97cf6411e64b4426a3c 419 Gene3D G3DSA:3.30.460.30 1 156 1.8E-56 T 11-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VSVS12_01007 e4baa7932d17c97cf6411e64b4426a3c 419 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 318 414 1.1E-20 T 11-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VSVS12_01007 e4baa7932d17c97cf6411e64b4426a3c 419 SUPERFAMILY SSF69742 1 156 6.28E-48 T 11-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VSVS12_01007 e4baa7932d17c97cf6411e64b4426a3c 419 PIRSF PIRSF000445 1 418 4.9E-158 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VSVS12_01007 e4baa7932d17c97cf6411e64b4426a3c 419 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 416 30.213 T 11-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 VSVS12_01007 e4baa7932d17c97cf6411e64b4426a3c 419 Gene3D G3DSA:3.40.50.720 159 311 1.9E-46 T 11-10-2018 VSVS12_03274 6c2c87b431608210eaf2f82bf4bc99f3 241 Pfam PF01066 CDP-alcohol phosphatidyltransferase 33 103 9.6E-8 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VSVS12_03274 6c2c87b431608210eaf2f82bf4bc99f3 241 Gene3D G3DSA:1.20.120.1760 12 216 6.7E-27 T 11-10-2018 VSVS12_03624 0f50836162f95b6bd7c12c8b3d167431 378 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 23 341 1.1E-109 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VSVS12_03624 0f50836162f95b6bd7c12c8b3d167431 378 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 21 341 64.101 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VSVS12_03624 0f50836162f95b6bd7c12c8b3d167431 378 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 252 341 7.0E-36 T 11-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VSVS12_03624 0f50836162f95b6bd7c12c8b3d167431 378 SUPERFAMILY SSF53901 21 341 5.77E-64 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 VSVS12_03624 0f50836162f95b6bd7c12c8b3d167431 378 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 124 201 4.2E-29 T 11-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VSVS12_03624 0f50836162f95b6bd7c12c8b3d167431 378 Gene3D G3DSA:3.40.47.10 19 378 4.2E-152 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 VSVS12_01432 8a9fe00828c941e1779b761421fedca9 392 SMART SM01154 53 392 1.9E-115 T 11-10-2018 IPR012548 Protein of unknown function DUF1704 VSVS12_01432 8a9fe00828c941e1779b761421fedca9 392 TIGRFAM TIGR02421 QEGLA: conserved hypothetical protein 28 383 1.3E-112 T 11-10-2018 IPR012656 Conserved hypothetical protein CHP02421, QEGLA VSVS12_01432 8a9fe00828c941e1779b761421fedca9 392 Pfam PF08014 Domain of unknown function (DUF1704) 55 389 1.3E-101 T 11-10-2018 IPR012548 Protein of unknown function DUF1704 VSVS12_01124 9af266ff7e2173ee0fd8570c49289fa6 317 SUPERFAMILY SSF53850 90 299 1.99E-47 T 11-10-2018 VSVS12_01124 9af266ff7e2173ee0fd8570c49289fa6 317 Pfam PF03466 LysR substrate binding domain 90 295 4.3E-46 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_01124 9af266ff7e2173ee0fd8570c49289fa6 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 65 3.5E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_01124 9af266ff7e2173ee0fd8570c49289fa6 317 SUPERFAMILY SSF46785 8 90 3.63E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_01124 9af266ff7e2173ee0fd8570c49289fa6 317 Gene3D G3DSA:3.40.190.10 94 293 1.7E-59 T 11-10-2018 VSVS12_01124 9af266ff7e2173ee0fd8570c49289fa6 317 Gene3D G3DSA:3.40.190.10 165 267 1.7E-59 T 11-10-2018 VSVS12_01124 9af266ff7e2173ee0fd8570c49289fa6 317 Gene3D G3DSA:1.10.10.10 5 92 1.2E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_01227 fe02a3b10da89ac1d905688459023a8d 281 SUPERFAMILY SSF53474 9 279 3.3E-41 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold VSVS12_01227 fe02a3b10da89ac1d905688459023a8d 281 PRINTS PR00412 Epoxide hydrolase signature 101 114 2.2E-6 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VSVS12_01227 fe02a3b10da89ac1d905688459023a8d 281 PRINTS PR00412 Epoxide hydrolase signature 55 70 2.2E-6 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VSVS12_01227 fe02a3b10da89ac1d905688459023a8d 281 PRINTS PR00412 Epoxide hydrolase signature 33 51 2.2E-6 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VSVS12_01227 fe02a3b10da89ac1d905688459023a8d 281 PRINTS PR00412 Epoxide hydrolase signature 115 128 2.2E-6 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VSVS12_01227 fe02a3b10da89ac1d905688459023a8d 281 PRINTS PR00412 Epoxide hydrolase signature 255 277 2.2E-6 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VSVS12_01227 fe02a3b10da89ac1d905688459023a8d 281 Pfam PF12697 Alpha/beta hydrolase family 29 273 1.7E-16 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VSVS12_01227 fe02a3b10da89ac1d905688459023a8d 281 Gene3D G3DSA:3.40.50.1820 2 274 9.3E-44 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold VSVS12_02580 6e2ddea42725ad7efed4808184e2fb8e 197 Pfam PF00355 Rieske [2Fe-2S] domain 55 174 3.6E-12 T 11-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 VSVS12_02580 6e2ddea42725ad7efed4808184e2fb8e 197 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 9 190 1.6E-73 T 11-10-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 VSVS12_02580 6e2ddea42725ad7efed4808184e2fb8e 197 Gene3D G3DSA:1.20.5.510 1 40 1.5E-5 T 11-10-2018 VSVS12_02580 6e2ddea42725ad7efed4808184e2fb8e 197 Gene3D G3DSA:2.102.10.10 43 190 4.9E-46 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VSVS12_02580 6e2ddea42725ad7efed4808184e2fb8e 197 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 5 40 1.6E-14 T 11-10-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 VSVS12_02580 6e2ddea42725ad7efed4808184e2fb8e 197 SUPERFAMILY SSF50022 30 192 3.63E-45 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VSVS12_02580 6e2ddea42725ad7efed4808184e2fb8e 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 119 130 9.3E-8 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 VSVS12_02580 6e2ddea42725ad7efed4808184e2fb8e 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 149 161 9.3E-8 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 VSVS12_02580 6e2ddea42725ad7efed4808184e2fb8e 197 PRINTS PR00162 Rieske 2Fe-2S subunit signature 162 174 9.3E-8 T 11-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 VSVS12_01014 23332ff65191950e3669cfd7f14bade5 157 SUPERFAMILY SSF55826 2 156 1.57E-42 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VSVS12_01014 23332ff65191950e3669cfd7f14bade5 157 Gene3D G3DSA:3.90.960.10 1 157 7.2E-58 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VSVS12_01014 23332ff65191950e3669cfd7f14bade5 157 PIRSF PIRSF006181 1 157 8.2E-51 T 11-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC VSVS12_01014 23332ff65191950e3669cfd7f14bade5 157 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 5.6E-57 T 11-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC VSVS12_01014 23332ff65191950e3669cfd7f14bade5 157 Pfam PF04073 Aminoacyl-tRNA editing domain 32 145 2.0E-24 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VSVS12_04305 993d141964bcb5ec40f630d96dea6249 183 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 93 104 0.21 T 11-10-2018 IPR001451 Hexapeptide repeat VSVS12_04305 993d141964bcb5ec40f630d96dea6249 183 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 129 164 1.7E-10 T 11-10-2018 IPR001451 Hexapeptide repeat VSVS12_04305 993d141964bcb5ec40f630d96dea6249 183 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 138 166 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VSVS12_04305 993d141964bcb5ec40f630d96dea6249 183 Gene3D G3DSA:2.160.10.10 1 183 8.1E-66 T 11-10-2018 VSVS12_04305 993d141964bcb5ec40f630d96dea6249 183 Pfam PF12464 Maltose acetyltransferase 7 49 5.5E-11 T 11-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 VSVS12_04305 993d141964bcb5ec40f630d96dea6249 183 SUPERFAMILY SSF51161 1 182 3.05E-51 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily VSVS12_04305 993d141964bcb5ec40f630d96dea6249 183 SMART SM01266 5 58 2.4E-10 T 11-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 VSVS12_00812 b01f844cddf09446ec20434c6fdf95ee 112 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 110 1.7E-60 T 11-10-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 VSVS12_00812 b01f844cddf09446ec20434c6fdf95ee 112 PRINTS PR00355 Adrenodoxin signature 42 52 3.6E-10 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 VSVS12_00812 b01f844cddf09446ec20434c6fdf95ee 112 PRINTS PR00355 Adrenodoxin signature 60 74 3.6E-10 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 VSVS12_00812 b01f844cddf09446ec20434c6fdf95ee 112 PRINTS PR00355 Adrenodoxin signature 83 91 3.6E-10 T 11-10-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 VSVS12_00812 b01f844cddf09446ec20434c6fdf95ee 112 Gene3D G3DSA:3.10.20.30 1 112 3.1E-36 T 11-10-2018 IPR012675 Beta-grasp domain superfamily VSVS12_00812 b01f844cddf09446ec20434c6fdf95ee 112 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 91 4.3E-15 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VSVS12_00812 b01f844cddf09446ec20434c6fdf95ee 112 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 11-10-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 VSVS12_00812 b01f844cddf09446ec20434c6fdf95ee 112 SUPERFAMILY SSF54292 5 107 1.32E-32 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VSVS12_00449 a92e46f3285e9fccd77eb53f31d05e0d 404 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 222 259 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VSVS12_00449 a92e46f3285e9fccd77eb53f31d05e0d 404 Gene3D G3DSA:3.90.1150.10 24 393 1.2E-149 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VSVS12_00449 a92e46f3285e9fccd77eb53f31d05e0d 404 Gene3D G3DSA:3.40.640.10 59 304 1.2E-149 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VSVS12_00449 a92e46f3285e9fccd77eb53f31d05e0d 404 SUPERFAMILY SSF53383 16 400 1.21E-126 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VSVS12_00449 a92e46f3285e9fccd77eb53f31d05e0d 404 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 7 403 4.4E-206 T 11-10-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 VSVS12_00449 a92e46f3285e9fccd77eb53f31d05e0d 404 PIRSF PIRSF000521 23 157 1.8E-7 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VSVS12_00449 a92e46f3285e9fccd77eb53f31d05e0d 404 PIRSF PIRSF000521 171 402 2.3E-37 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VSVS12_00449 a92e46f3285e9fccd77eb53f31d05e0d 404 Pfam PF00202 Aminotransferase class-III 22 399 1.9E-127 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VSVS12_00449 a92e46f3285e9fccd77eb53f31d05e0d 404 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 15 402 69.641 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 VSVS12_00449 a92e46f3285e9fccd77eb53f31d05e0d 404 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 16 399 2.4E-150 T 11-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 VSVS12_01108 f112cea8855e336547a5430c6f7530e8 350 Pfam PF04245 37-kD nucleoid-associated bacterial protein 27 344 4.3E-100 T 11-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 VSVS12_01108 f112cea8855e336547a5430c6f7530e8 350 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 21 350 46.298 T 11-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 VSVS12_04485 09f753e211c039ec42cab8e0c71570d5 335 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 332 40.412 T 11-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 VSVS12_04485 09f753e211c039ec42cab8e0c71570d5 335 Pfam PF04245 37-kD nucleoid-associated bacterial protein 10 326 2.1E-82 T 11-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 VSVS12_03828 f88c42bf713e6614a87e5f23e6f0a1c3 313 Gene3D G3DSA:3.60.10.10 32 308 7.2E-21 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VSVS12_03828 f88c42bf713e6614a87e5f23e6f0a1c3 313 SUPERFAMILY SSF56219 36 307 1.07E-24 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VSVS12_00066 b48b693c4551af0f42f718b729426c72 433 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 50.537 T 11-10-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 VSVS12_00066 b48b693c4551af0f42f718b729426c72 433 Pfam PF00270 DEAD/DEAH box helicase 33 207 3.0E-47 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VSVS12_00066 b48b693c4551af0f42f718b729426c72 433 Gene3D G3DSA:3.40.50.300 229 411 1.2E-46 T 11-10-2018 VSVS12_00066 b48b693c4551af0f42f718b729426c72 433 SMART SM00490 270 351 2.1E-32 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_00066 b48b693c4551af0f42f718b729426c72 433 Pfam PF00271 Helicase conserved C-terminal domain 243 351 6.9E-30 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_00066 b48b693c4551af0f42f718b729426c72 433 SMART SM00487 28 234 1.8E-57 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VSVS12_00066 b48b693c4551af0f42f718b729426c72 433 SUPERFAMILY SSF52540 84 363 1.16E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00066 b48b693c4551af0f42f718b729426c72 433 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VSVS12_00066 b48b693c4551af0f42f718b729426c72 433 Gene3D G3DSA:3.40.50.300 2 222 2.3E-73 T 11-10-2018 VSVS12_04175 9782c7413a16aa22b53b8674fb1fe6f7 255 SUPERFAMILY SSF52540 4 227 2.51E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_04175 9782c7413a16aa22b53b8674fb1fe6f7 255 Pfam PF00005 ABC transporter 20 166 6.5E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_04175 9782c7413a16aa22b53b8674fb1fe6f7 255 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_04175 9782c7413a16aa22b53b8674fb1fe6f7 255 Gene3D G3DSA:3.40.50.300 2 254 1.1E-66 T 11-10-2018 VSVS12_04175 9782c7413a16aa22b53b8674fb1fe6f7 255 SMART SM00382 26 223 3.9E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_03556 4cae39d387ab640d3c732fc1a1b9b1ca 784 Gene3D G3DSA:3.40.50.2300 746 784 7.7E-12 T 11-10-2018 VSVS12_03556 4cae39d387ab640d3c732fc1a1b9b1ca 784 PRINTS PR00344 Bacterial sensor protein C-terminal signature 499 517 1.7E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_03556 4cae39d387ab640d3c732fc1a1b9b1ca 784 PRINTS PR00344 Bacterial sensor protein C-terminal signature 464 478 1.7E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_03556 4cae39d387ab640d3c732fc1a1b9b1ca 784 PRINTS PR00344 Bacterial sensor protein C-terminal signature 523 536 1.7E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_03556 4cae39d387ab640d3c732fc1a1b9b1ca 784 PRINTS PR00344 Bacterial sensor protein C-terminal signature 482 492 1.7E-17 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_03556 4cae39d387ab640d3c732fc1a1b9b1ca 784 Gene3D G3DSA:1.10.287.130 288 375 1.6E-28 T 11-10-2018 VSVS12_03556 4cae39d387ab640d3c732fc1a1b9b1ca 784 SUPERFAMILY SSF55874 366 541 4.19E-46 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_03556 4cae39d387ab640d3c732fc1a1b9b1ca 784 Gene3D G3DSA:3.30.565.10 376 543 5.5E-54 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_03556 4cae39d387ab640d3c732fc1a1b9b1ca 784 SUPERFAMILY SSF52172 686 782 1.21E-26 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_03556 4cae39d387ab640d3c732fc1a1b9b1ca 784 Pfam PF00072 Response regulator receiver domain 690 782 5.4E-17 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_03556 4cae39d387ab640d3c732fc1a1b9b1ca 784 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 425 538 1.2E-30 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_03556 4cae39d387ab640d3c732fc1a1b9b1ca 784 SMART SM00388 312 377 1.1E-25 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_03556 4cae39d387ab640d3c732fc1a1b9b1ca 784 SMART SM00448 688 783 1.0E-12 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_03556 4cae39d387ab640d3c732fc1a1b9b1ca 784 SMART SM00387 424 539 6.4E-39 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_03556 4cae39d387ab640d3c732fc1a1b9b1ca 784 Pfam PF00512 His Kinase A (phospho-acceptor) domain 312 377 2.7E-20 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_03556 4cae39d387ab640d3c732fc1a1b9b1ca 784 SUPERFAMILY SSF47384 296 378 1.77E-21 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VSVS12_03556 4cae39d387ab640d3c732fc1a1b9b1ca 784 Gene3D G3DSA:3.40.50.12330 679 745 9.5E-19 T 11-10-2018 VSVS12_00329 960d326901952e70b18fc516ca9a5992 277 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 226 231 - T 11-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site VSVS12_00329 960d326901952e70b18fc516ca9a5992 277 SUPERFAMILY SSF47781 70 144 2.41E-11 T 11-10-2018 IPR010994 RuvA domain 2-like VSVS12_00329 960d326901952e70b18fc516ca9a5992 277 Gene3D G3DSA:1.10.150.20 80 142 2.1E-5 T 11-10-2018 VSVS12_00329 960d326901952e70b18fc516ca9a5992 277 Pfam PF04002 RadC-like JAB domain 157 275 6.0E-43 T 11-10-2018 IPR025657 RadC-like JAB domain VSVS12_00329 960d326901952e70b18fc516ca9a5992 277 TIGRFAM TIGR00608 radc: DNA repair protein RadC 64 277 6.9E-75 T 11-10-2018 IPR001405 Uncharacterised protein family UPF0758 VSVS12_00329 960d326901952e70b18fc516ca9a5992 277 Gene3D G3DSA:3.40.140.10 155 277 1.2E-41 T 11-10-2018 VSVS12_01549 8801100f4a423359afde67292c4689cb 284 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 1.7E-29 T 11-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 VSVS12_01549 8801100f4a423359afde67292c4689cb 284 Pfam PF01380 SIS domain 124 252 3.7E-25 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VSVS12_01549 8801100f4a423359afde67292c4689cb 284 Gene3D G3DSA:3.40.50.10490 94 276 1.2E-39 T 11-10-2018 VSVS12_01549 8801100f4a423359afde67292c4689cb 284 SUPERFAMILY SSF53697 93 279 2.43E-39 T 11-10-2018 VSVS12_01549 8801100f4a423359afde67292c4689cb 284 Gene3D G3DSA:1.10.10.10 1 79 2.3E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_01549 8801100f4a423359afde67292c4689cb 284 SUPERFAMILY SSF46689 1 80 1.58E-21 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_04173 b6e00882d2f5db5de54094b505da4233 665 SUPERFAMILY SSF81345 21 336 3.4E-62 T 11-10-2018 IPR037294 ABC transporter, BtuC-like VSVS12_04173 b6e00882d2f5db5de54094b505da4233 665 Pfam PF01032 FecCD transport family 369 665 4.8E-67 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VSVS12_04173 b6e00882d2f5db5de54094b505da4233 665 Pfam PF01032 FecCD transport family 29 336 3.8E-69 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VSVS12_04173 b6e00882d2f5db5de54094b505da4233 665 Gene3D G3DSA:1.10.3470.10 351 665 1.0E-68 T 11-10-2018 IPR037294 ABC transporter, BtuC-like VSVS12_04173 b6e00882d2f5db5de54094b505da4233 665 Gene3D G3DSA:1.10.3470.10 13 340 1.4E-74 T 11-10-2018 IPR037294 ABC transporter, BtuC-like VSVS12_04173 b6e00882d2f5db5de54094b505da4233 665 SUPERFAMILY SSF81345 355 665 1.28E-63 T 11-10-2018 IPR037294 ABC transporter, BtuC-like VSVS12_02847 a9d8491515cdeffadb4a2d071bc05505 265 Pfam PF09955 Predicted integral membrane protein (DUF2189) 82 195 5.0E-27 T 11-10-2018 IPR018692 Predicted integral membrane protein DUF2189 VSVS12_00375 9d3b5b8f5f32c5bac52922879e389ab9 179 Gene3D G3DSA:3.30.70.940 19 177 6.6E-45 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VSVS12_00375 9d3b5b8f5f32c5bac52922879e389ab9 179 Pfam PF02357 Transcription termination factor nusG 19 113 2.4E-17 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VSVS12_00375 9d3b5b8f5f32c5bac52922879e389ab9 179 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 21 174 5.7E-43 T 11-10-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 VSVS12_00375 9d3b5b8f5f32c5bac52922879e389ab9 179 SUPERFAMILY SSF82679 19 117 8.63E-26 T 11-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VSVS12_00375 9d3b5b8f5f32c5bac52922879e389ab9 179 SMART SM00738 18 117 8.2E-14 T 11-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 VSVS12_02111 4fc9b3931dc5b22ab7a9800ad2ca7dc1 476 SUPERFAMILY SSF51556 85 384 7.34E-81 T 11-10-2018 IPR032466 Metal-dependent hydrolase VSVS12_02111 4fc9b3931dc5b22ab7a9800ad2ca7dc1 476 Gene3D G3DSA:3.20.20.140 86 376 4.4E-136 T 11-10-2018 VSVS12_02111 4fc9b3931dc5b22ab7a9800ad2ca7dc1 476 SUPERFAMILY SSF51338 28 453 8.52E-31 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VSVS12_02111 4fc9b3931dc5b22ab7a9800ad2ca7dc1 476 Gene3D G3DSA:2.30.40.10 36 446 4.4E-136 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VSVS12_02111 4fc9b3931dc5b22ab7a9800ad2ca7dc1 476 Pfam PF01979 Amidohydrolase family 82 432 3.8E-67 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VSVS12_02252 84376d4e93456b673330fde90edfecad 240 PIRSF PIRSF002884 13 240 7.4E-87 T 11-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 VSVS12_02252 84376d4e93456b673330fde90edfecad 240 Pfam PF04344 Chemotaxis phosphatase, CheZ 37 240 1.2E-74 T 11-10-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 VSVS12_02252 84376d4e93456b673330fde90edfecad 240 Gene3D G3DSA:1.10.287.500 55 189 7.6E-45 T 11-10-2018 VSVS12_02252 84376d4e93456b673330fde90edfecad 240 SUPERFAMILY SSF75708 26 239 3.14E-63 T 11-10-2018 VSVS12_00469 d68bd4b822f0f7a590ac73d34d2ea343 245 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 3 244 43.571 T 11-10-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB VSVS12_00469 d68bd4b822f0f7a590ac73d34d2ea343 245 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 4 243 3.3E-86 T 11-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 VSVS12_00469 d68bd4b822f0f7a590ac73d34d2ea343 245 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 79 5.3E-19 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 VSVS12_00469 d68bd4b822f0f7a590ac73d34d2ea343 245 SUPERFAMILY SSF55315 3 77 4.36E-20 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like VSVS12_00469 d68bd4b822f0f7a590ac73d34d2ea343 245 Pfam PF00588 SpoU rRNA Methylase family 97 237 7.8E-39 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VSVS12_00469 d68bd4b822f0f7a590ac73d34d2ea343 245 Gene3D G3DSA:3.30.1330.30 1 77 4.6E-27 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like VSVS12_00469 d68bd4b822f0f7a590ac73d34d2ea343 245 Gene3D G3DSA:3.40.1280.10 78 244 7.4E-64 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VSVS12_00469 d68bd4b822f0f7a590ac73d34d2ea343 245 SUPERFAMILY SSF75217 69 243 2.62E-48 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases VSVS12_00469 d68bd4b822f0f7a590ac73d34d2ea343 245 SMART SM00967 5 81 3.5E-19 T 11-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 VSVS12_00312 7342b22f72ea85b1e0db880acc1908d7 881 SUPERFAMILY SSF49384 25 197 7.53E-65 T 11-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 VSVS12_00312 7342b22f72ea85b1e0db880acc1908d7 881 Gene3D G3DSA:2.60.40.10 816 880 4.2E-23 T 11-10-2018 IPR013783 Immunoglobulin-like fold VSVS12_00312 7342b22f72ea85b1e0db880acc1908d7 881 Gene3D G3DSA:3.30.379.10 203 326 1.3E-20 T 11-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 VSVS12_00312 7342b22f72ea85b1e0db880acc1908d7 881 Pfam PF03174 Chitobiase/beta-hexosaminidase C-terminal domain 802 877 3.4E-27 T 11-10-2018 IPR004867 Chitobiase C-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VSVS12_00312 7342b22f72ea85b1e0db880acc1908d7 881 SMART SM01081 33 194 3.6E-91 T 11-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VSVS12_00312 7342b22f72ea85b1e0db880acc1908d7 881 Pfam PF03173 Putative carbohydrate binding domain 34 192 2.7E-61 T 11-10-2018 IPR004866 Chitobiase/beta-hexosaminidases, N-terminal domain KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VSVS12_00312 7342b22f72ea85b1e0db880acc1908d7 881 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 210 325 8.6E-12 T 11-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal VSVS12_00312 7342b22f72ea85b1e0db880acc1908d7 881 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 329 762 6.1E-107 T 11-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VSVS12_00312 7342b22f72ea85b1e0db880acc1908d7 881 SUPERFAMILY SSF55545 207 328 3.27E-21 T 11-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 VSVS12_00312 7342b22f72ea85b1e0db880acc1908d7 881 PRINTS PR00738 Glycosyl hydrolase family 20 signature 352 373 1.9E-47 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VSVS12_00312 7342b22f72ea85b1e0db880acc1908d7 881 PRINTS PR00738 Glycosyl hydrolase family 20 signature 726 742 1.9E-47 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VSVS12_00312 7342b22f72ea85b1e0db880acc1908d7 881 PRINTS PR00738 Glycosyl hydrolase family 20 signature 323 340 1.9E-47 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VSVS12_00312 7342b22f72ea85b1e0db880acc1908d7 881 PRINTS PR00738 Glycosyl hydrolase family 20 signature 523 536 1.9E-47 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VSVS12_00312 7342b22f72ea85b1e0db880acc1908d7 881 PRINTS PR00738 Glycosyl hydrolase family 20 signature 429 446 1.9E-47 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VSVS12_00312 7342b22f72ea85b1e0db880acc1908d7 881 PRINTS PR00738 Glycosyl hydrolase family 20 signature 744 761 1.9E-47 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VSVS12_00312 7342b22f72ea85b1e0db880acc1908d7 881 PRINTS PR00738 Glycosyl hydrolase family 20 signature 496 514 1.9E-47 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VSVS12_00312 7342b22f72ea85b1e0db880acc1908d7 881 PRINTS PR00738 Glycosyl hydrolase family 20 signature 291 311 1.9E-47 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VSVS12_00312 7342b22f72ea85b1e0db880acc1908d7 881 Gene3D G3DSA:3.20.20.80 327 815 3.2E-164 T 11-10-2018 VSVS12_00312 7342b22f72ea85b1e0db880acc1908d7 881 SUPERFAMILY SSF81296 779 880 2.94E-37 T 11-10-2018 IPR014756 Immunoglobulin E-set VSVS12_00312 7342b22f72ea85b1e0db880acc1908d7 881 SUPERFAMILY SSF51445 329 771 1.01E-141 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily VSVS12_00312 7342b22f72ea85b1e0db880acc1908d7 881 Gene3D G3DSA:2.60.40.290 24 166 4.1E-54 T 11-10-2018 IPR012291 CBM2, carbohydrate-binding domain superfamily GO:0004553|GO:0030247 VSVS12_04301 1ac207103c898e4cafec1019ce2b3348 382 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 72 86 - T 11-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 VSVS12_04301 1ac207103c898e4cafec1019ce2b3348 382 SUPERFAMILY SSF51735 171 345 3.4E-49 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_04301 1ac207103c898e4cafec1019ce2b3348 382 Gene3D G3DSA:3.40.50.720 185 323 1.4E-151 T 11-10-2018 VSVS12_04301 1ac207103c898e4cafec1019ce2b3348 382 SUPERFAMILY SSF50129 10 196 7.52E-72 T 11-10-2018 IPR011032 GroES-like superfamily VSVS12_04301 1ac207103c898e4cafec1019ce2b3348 382 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 39 165 2.2E-25 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VSVS12_04301 1ac207103c898e4cafec1019ce2b3348 382 Pfam PF00107 Zinc-binding dehydrogenase 208 338 1.0E-25 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VSVS12_04301 1ac207103c898e4cafec1019ce2b3348 382 SMART SM00829 23 378 0.0039 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VSVS12_04301 1ac207103c898e4cafec1019ce2b3348 382 SUPERFAMILY SSF50129 329 379 5.65E-11 T 11-10-2018 IPR011032 GroES-like superfamily VSVS12_04301 1ac207103c898e4cafec1019ce2b3348 382 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 13 380 6.1E-227 T 11-10-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 VSVS12_04301 1ac207103c898e4cafec1019ce2b3348 382 Gene3D G3DSA:3.90.180.10 17 375 1.4E-151 T 11-10-2018 VSVS12_00714 52ff70bae9332e899643ec37c61ec08a 430 Gene3D G3DSA:3.40.640.10 69 317 1.0E-176 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VSVS12_00714 52ff70bae9332e899643ec37c61ec08a 430 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 104.271 T 11-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 VSVS12_00714 52ff70bae9332e899643ec37c61ec08a 430 Gene3D G3DSA:3.90.1150.10 7 419 1.0E-176 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VSVS12_00714 52ff70bae9332e899643ec37c61ec08a 430 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 424 1.1E-191 T 11-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 VSVS12_00714 52ff70bae9332e899643ec37c61ec08a 430 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VSVS12_00714 52ff70bae9332e899643ec37c61ec08a 430 Pfam PF00202 Aminotransferase class-III 32 395 5.0E-75 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VSVS12_00714 52ff70bae9332e899643ec37c61ec08a 430 SUPERFAMILY SSF53383 2 423 2.28E-132 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VSVS12_02459 0f1cc7e0e2ef227dc605154147f39d42 704 Gene3D G3DSA:3.40.50.300 448 573 7.3E-25 T 11-10-2018 VSVS12_02459 0f1cc7e0e2ef227dc605154147f39d42 704 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 8 702 2.8E-211 T 11-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 VSVS12_02459 0f1cc7e0e2ef227dc605154147f39d42 704 Gene3D G3DSA:1.10.10.1020 4 123 2.3E-23 T 11-10-2018 VSVS12_02459 0f1cc7e0e2ef227dc605154147f39d42 704 Pfam PF13538 UvrD-like helicase C-terminal domain 631 677 9.4E-15 T 11-10-2018 IPR027785 UvrD-like helicase C-terminal domain VSVS12_02459 0f1cc7e0e2ef227dc605154147f39d42 704 SUPERFAMILY SSF52540 10 443 4.55E-46 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02459 0f1cc7e0e2ef227dc605154147f39d42 704 Gene3D G3DSA:3.40.50.300 604 692 5.4E-20 T 11-10-2018 VSVS12_02459 0f1cc7e0e2ef227dc605154147f39d42 704 Gene3D G3DSA:3.40.50.300 193 438 7.9E-73 T 11-10-2018 VSVS12_02459 0f1cc7e0e2ef227dc605154147f39d42 704 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 17 700 48.8 T 11-10-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 VSVS12_02459 0f1cc7e0e2ef227dc605154147f39d42 704 Pfam PF13604 AAA domain 234 396 1.6E-30 T 11-10-2018 VSVS12_02459 0f1cc7e0e2ef227dc605154147f39d42 704 SUPERFAMILY SSF52540 361 700 6.55E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00948 59ce0a90ff889b6ca19933853f07a1ee 185 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 2 162 1.2E-25 T 11-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 VSVS12_00948 59ce0a90ff889b6ca19933853f07a1ee 185 SUPERFAMILY SSF56300 2 168 3.51E-37 T 11-10-2018 VSVS12_00948 59ce0a90ff889b6ca19933853f07a1ee 185 ProSitePatterns PS01269 Uncharacterized protein family UPF0025 signature. 121 145 - T 11-10-2018 IPR020935 Phosphodiesterase YfcE, conserved site VSVS12_00948 59ce0a90ff889b6ca19933853f07a1ee 185 Gene3D G3DSA:3.60.21.10 1 182 2.2E-63 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like VSVS12_00948 59ce0a90ff889b6ca19933853f07a1ee 185 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 2 169 3.5E-30 T 11-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 VSVS12_01374 9a07bc22fa99ea47553c2041a7f29376 166 Gene3D G3DSA:1.10.287.680 1 53 4.7E-31 T 11-10-2018 IPR023145 YfbU, helix-hairpin domain superfamily VSVS12_01374 9a07bc22fa99ea47553c2041a7f29376 166 Pfam PF03887 YfbU domain 1 166 1.3E-67 T 11-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU VSVS12_01374 9a07bc22fa99ea47553c2041a7f29376 166 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 166 37.269 T 11-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU VSVS12_01374 9a07bc22fa99ea47553c2041a7f29376 166 PIRSF PIRSF006272 1 166 2.2E-75 T 11-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU VSVS12_01374 9a07bc22fa99ea47553c2041a7f29376 166 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 166 2.0E-78 T 11-10-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU VSVS12_01374 9a07bc22fa99ea47553c2041a7f29376 166 Gene3D G3DSA:1.10.3190.10 54 166 1.5E-36 T 11-10-2018 IPR023146 YfbU, alpha-helical bundle domain superfamily VSVS12_01374 9a07bc22fa99ea47553c2041a7f29376 166 SUPERFAMILY SSF116960 1 166 1.03E-61 T 11-10-2018 VSVS12_03032 8caed169d98b2eaa73b499c0f4a70d47 239 SUPERFAMILY SSF55785 11 122 1.74E-11 T 11-10-2018 IPR035965 PAS domain superfamily VSVS12_03032 8caed169d98b2eaa73b499c0f4a70d47 239 Pfam PF00196 Bacterial regulatory proteins, luxR family 156 211 2.1E-11 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_03032 8caed169d98b2eaa73b499c0f4a70d47 239 Gene3D G3DSA:1.10.10.10 152 215 2.9E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_03032 8caed169d98b2eaa73b499c0f4a70d47 239 Gene3D G3DSA:3.30.450.20 5 121 2.8E-12 T 11-10-2018 VSVS12_03032 8caed169d98b2eaa73b499c0f4a70d47 239 Pfam PF08448 PAS fold 12 123 1.8E-20 T 11-10-2018 IPR013656 PAS fold-4 VSVS12_03032 8caed169d98b2eaa73b499c0f4a70d47 239 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 171 1.9E-5 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_03032 8caed169d98b2eaa73b499c0f4a70d47 239 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 187 1.9E-5 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_03032 8caed169d98b2eaa73b499c0f4a70d47 239 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 187 199 1.9E-5 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_03032 8caed169d98b2eaa73b499c0f4a70d47 239 SMART SM00421 154 211 1.0E-8 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_03032 8caed169d98b2eaa73b499c0f4a70d47 239 SUPERFAMILY SSF46894 153 216 1.8E-12 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VSVS12_01170 187e8c772c0bee9c8248bf527d86f190 332 PIRSF PIRSF006470 1 332 8.3E-123 T 11-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 VSVS12_01170 187e8c772c0bee9c8248bf527d86f190 332 Gene3D G3DSA:3.40.190.170 27 328 6.5E-87 T 11-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VSVS12_01170 187e8c772c0bee9c8248bf527d86f190 332 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 33 276 1.6E-77 T 11-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 VSVS12_01170 187e8c772c0bee9c8248bf527d86f190 332 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 33 317 5.2E-100 T 11-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VSVS12_00016 492151cff0b92abba5b82b579715cadd 199 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 131 137 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VSVS12_00016 492151cff0b92abba5b82b579715cadd 199 SUPERFAMILY SSF53335 19 195 8.51E-53 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_00016 492151cff0b92abba5b82b579715cadd 199 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 17 196 2.3E-58 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 VSVS12_00016 492151cff0b92abba5b82b579715cadd 199 Pfam PF03602 Conserved hypothetical protein 95 19 194 5.8E-60 T 11-10-2018 VSVS12_00016 492151cff0b92abba5b82b579715cadd 199 PIRSF PIRSF004553 18 198 3.0E-54 T 11-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 VSVS12_00016 492151cff0b92abba5b82b579715cadd 199 Gene3D G3DSA:3.40.50.150 6 199 3.3E-61 T 11-10-2018 VSVS12_03441 1d48847a90ce0067ed08a5eb70c95091 470 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 362 468 7.0E-14 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_03441 1d48847a90ce0067ed08a5eb70c95091 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 409 3.4E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_03441 1d48847a90ce0067ed08a5eb70c95091 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 449 3.4E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_03441 1d48847a90ce0067ed08a5eb70c95091 470 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 428 3.4E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_03441 1d48847a90ce0067ed08a5eb70c95091 470 Gene3D G3DSA:3.30.565.10 322 469 6.0E-24 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_03441 1d48847a90ce0067ed08a5eb70c95091 470 SUPERFAMILY SSF55874 323 469 4.19E-24 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_03441 1d48847a90ce0067ed08a5eb70c95091 470 SMART SM00387 361 470 8.2E-15 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_03441 1d48847a90ce0067ed08a5eb70c95091 470 SUPERFAMILY SSF47384 248 311 4.9E-9 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VSVS12_03441 1d48847a90ce0067ed08a5eb70c95091 470 Gene3D G3DSA:1.10.287.130 215 320 1.0E-13 T 11-10-2018 VSVS12_01613 33a0ada9a4491a9b7fc22af25f07b817 170 SUPERFAMILY SSF55729 5 166 4.09E-24 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_01613 33a0ada9a4491a9b7fc22af25f07b817 170 Gene3D G3DSA:3.40.630.30 4 168 1.9E-22 T 11-10-2018 VSVS12_01613 33a0ada9a4491a9b7fc22af25f07b817 170 Pfam PF13302 Acetyltransferase (GNAT) domain 7 144 1.2E-13 T 11-10-2018 IPR000182 GNAT domain VSVS12_03437 ff9df2c06ba64ca116c8a6107f3c970d 652 SUPERFAMILY SSF51445 112 540 6.38E-98 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily VSVS12_03437 ff9df2c06ba64ca116c8a6107f3c970d 652 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 6 647 7.6E-199 T 11-10-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 VSVS12_03437 ff9df2c06ba64ca116c8a6107f3c970d 652 SUPERFAMILY SSF51011 556 647 6.26E-12 T 11-10-2018 VSVS12_03437 ff9df2c06ba64ca116c8a6107f3c970d 652 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 10 87 8.0E-10 T 11-10-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077|Reactome: R-HSA-3878781 VSVS12_03437 ff9df2c06ba64ca116c8a6107f3c970d 652 Gene3D G3DSA:3.20.20.80 117 548 1.4E-142 T 11-10-2018 VSVS12_03437 ff9df2c06ba64ca116c8a6107f3c970d 652 SUPERFAMILY SSF81296 7 125 4.2E-21 T 11-10-2018 IPR014756 Immunoglobulin E-set VSVS12_03437 ff9df2c06ba64ca116c8a6107f3c970d 652 Gene3D G3DSA:2.60.40.1180 555 647 2.1E-5 T 11-10-2018 IPR013780 Glycosyl hydrolase, all-beta VSVS12_03437 ff9df2c06ba64ca116c8a6107f3c970d 652 Gene3D G3DSA:2.60.40.10 1 116 3.5E-18 T 11-10-2018 IPR013783 Immunoglobulin-like fold VSVS12_03437 ff9df2c06ba64ca116c8a6107f3c970d 652 SMART SM00642 137 539 6.8E-5 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VSVS12_03437 ff9df2c06ba64ca116c8a6107f3c970d 652 Pfam PF00128 Alpha amylase, catalytic domain 176 251 3.7E-5 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VSVS12_00317 77681f2393ba8aab093130512522b7f9 207 SMART SM00072 3 187 1.4E-72 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit VSVS12_00317 77681f2393ba8aab093130512522b7f9 207 SUPERFAMILY SSF52540 3 189 4.01E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00317 77681f2393ba8aab093130512522b7f9 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 1.5E-75 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 VSVS12_00317 77681f2393ba8aab093130512522b7f9 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 37.765 T 11-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 VSVS12_00317 77681f2393ba8aab093130512522b7f9 207 Gene3D G3DSA:3.40.50.300 8 183 1.6E-73 T 11-10-2018 VSVS12_00317 77681f2393ba8aab093130512522b7f9 207 Gene3D G3DSA:3.30.63.10 37 96 1.6E-73 T 11-10-2018 VSVS12_00317 77681f2393ba8aab093130512522b7f9 207 Pfam PF00625 Guanylate kinase 5 185 6.6E-62 T 11-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit VSVS12_00317 77681f2393ba8aab093130512522b7f9 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 11-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 VSVS12_03186 73d663431d52e3cc82108ee9bc611159 282 Pfam PF00005 ABC transporter 36 191 2.3E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_03186 73d663431d52e3cc82108ee9bc611159 282 SUPERFAMILY SSF52540 15 263 7.87E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03186 73d663431d52e3cc82108ee9bc611159 282 Gene3D G3DSA:3.40.50.300 13 281 1.2E-82 T 11-10-2018 VSVS12_03186 73d663431d52e3cc82108ee9bc611159 282 SMART SM00382 44 241 1.5E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_03186 73d663431d52e3cc82108ee9bc611159 282 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 275 2.2E-6 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VSVS12_03186 73d663431d52e3cc82108ee9bc611159 282 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_02810 f9d2da5a32a7f9cc57616932da10f5ad 154 SUPERFAMILY SSF102712 54 121 7.19E-5 T 11-10-2018 VSVS12_02810 f9d2da5a32a7f9cc57616932da10f5ad 154 TIGRFAM TIGR00608 radc: DNA repair protein RadC 15 154 7.2E-44 T 11-10-2018 IPR001405 Uncharacterised protein family UPF0758 VSVS12_02810 f9d2da5a32a7f9cc57616932da10f5ad 154 Gene3D G3DSA:3.40.140.10 31 154 2.3E-41 T 11-10-2018 VSVS12_02810 f9d2da5a32a7f9cc57616932da10f5ad 154 Pfam PF04002 RadC-like JAB domain 34 153 1.2E-42 T 11-10-2018 IPR025657 RadC-like JAB domain VSVS12_02810 f9d2da5a32a7f9cc57616932da10f5ad 154 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 104 109 - T 11-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site VSVS12_03986 ab90022d355d6d40a77da7aa18154681 605 Gene3D G3DSA:3.40.190.10 33 591 3.0E-225 T 11-10-2018 VSVS12_03986 ab90022d355d6d40a77da7aa18154681 605 SUPERFAMILY SSF53850 51 592 4.16E-113 T 11-10-2018 VSVS12_03986 ab90022d355d6d40a77da7aa18154681 605 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 100 508 1.1E-78 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain VSVS12_03986 ab90022d355d6d40a77da7aa18154681 605 PIRSF PIRSF002741 7 596 1.1E-124 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VSVS12_03986 ab90022d355d6d40a77da7aa18154681 605 Gene3D G3DSA:3.10.105.10 313 571 3.0E-225 T 11-10-2018 VSVS12_00610 4308b6112d942f2dda9223f5a046cfa3 489 Pfam PF00575 S1 RNA binding domain 38 109 5.9E-6 T 11-10-2018 IPR003029 S1 domain GO:0003676 VSVS12_00610 4308b6112d942f2dda9223f5a046cfa3 489 SUPERFAMILY SSF50249 39 128 1.17E-19 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_00610 4308b6112d942f2dda9223f5a046cfa3 489 SMART SM00316 37 122 5.5E-10 T 11-10-2018 IPR022967 RNA-binding domain, S1 VSVS12_00610 4308b6112d942f2dda9223f5a046cfa3 489 Pfam PF10150 Ribonuclease E/G family 124 393 4.2E-102 T 11-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 VSVS12_00610 4308b6112d942f2dda9223f5a046cfa3 489 Gene3D G3DSA:3.40.1260.20 402 488 3.9E-8 T 11-10-2018 VSVS12_00610 4308b6112d942f2dda9223f5a046cfa3 489 Gene3D G3DSA:2.40.50.140 31 127 5.6E-32 T 11-10-2018 VSVS12_00610 4308b6112d942f2dda9223f5a046cfa3 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 3.9E-172 T 11-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 VSVS12_03208 e42d689f664a687074e316f5e324471b 341 SUPERFAMILY SSF53335 4 337 3.35E-59 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_03208 e42d689f664a687074e316f5e324471b 341 Pfam PF01555 DNA methylase 23 336 3.2E-44 T 11-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 VSVS12_03208 e42d689f664a687074e316f5e324471b 341 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 26 32 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VSVS12_03208 e42d689f664a687074e316f5e324471b 341 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 57 77 2.5E-27 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 VSVS12_03208 e42d689f664a687074e316f5e324471b 341 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 297 315 2.5E-27 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 VSVS12_03208 e42d689f664a687074e316f5e324471b 341 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 22 36 2.5E-27 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 VSVS12_03208 e42d689f664a687074e316f5e324471b 341 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 278 295 2.5E-27 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 VSVS12_03208 e42d689f664a687074e316f5e324471b 341 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 320 340 2.5E-27 T 11-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 VSVS12_02577 1742f97cd8f448833d33fec87f1a8a4b 211 SUPERFAMILY SSF52833 11 110 1.59E-22 T 11-10-2018 IPR036249 Thioredoxin-like superfamily VSVS12_02577 1742f97cd8f448833d33fec87f1a8a4b 211 Gene3D G3DSA:1.20.1050.10 89 193 7.6E-77 T 11-10-2018 VSVS12_02577 1742f97cd8f448833d33fec87f1a8a4b 211 Pfam PF00043 Glutathione S-transferase, C-terminal domain 119 194 7.9E-8 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal VSVS12_02577 1742f97cd8f448833d33fec87f1a8a4b 211 Gene3D G3DSA:3.40.30.10 11 202 7.6E-77 T 11-10-2018 VSVS12_02577 1742f97cd8f448833d33fec87f1a8a4b 211 SUPERFAMILY SSF47616 82 208 6.54E-22 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VSVS12_02577 1742f97cd8f448833d33fec87f1a8a4b 211 Pfam PF13417 Glutathione S-transferase, N-terminal domain 13 87 1.9E-17 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VSVS12_00611 616241482b67949eb3b314907ecc42ea 1290 Pfam PF13116 Protein of unknown function 506 790 6.0E-93 T 11-10-2018 IPR025263 Domain of unknown function DUF3971 VSVS12_00611 616241482b67949eb3b314907ecc42ea 1290 Pfam PF13502 AsmA-like C-terminal region 1027 1267 4.1E-60 T 11-10-2018 IPR032712 AsmA-like, C-terminal VSVS12_00611 616241482b67949eb3b314907ecc42ea 1290 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 7 1278 0.0 T 11-10-2018 IPR011836 Conserved hypothetical protein CHP02099 VSVS12_02362 b403edaa14adf8e221e94e343e0ec534 290 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 287 2.0E-144 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VSVS12_02362 b403edaa14adf8e221e94e343e0ec534 290 PIRSF PIRSF001553 1 289 8.1E-133 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VSVS12_02362 b403edaa14adf8e221e94e343e0ec534 290 Gene3D G3DSA:3.40.50.720 1 123 9.6E-50 T 11-10-2018 VSVS12_02362 b403edaa14adf8e221e94e343e0ec534 290 Gene3D G3DSA:3.40.50.261 124 288 1.5E-76 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VSVS12_02362 b403edaa14adf8e221e94e343e0ec534 290 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.03 T 11-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VSVS12_02362 b403edaa14adf8e221e94e343e0ec534 290 SUPERFAMILY SSF52210 123 286 5.63E-56 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VSVS12_02362 b403edaa14adf8e221e94e343e0ec534 290 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 11-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site VSVS12_02362 b403edaa14adf8e221e94e343e0ec534 290 SUPERFAMILY SSF51735 1 122 2.0E-41 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_02362 b403edaa14adf8e221e94e343e0ec534 290 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 11-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site VSVS12_02362 b403edaa14adf8e221e94e343e0ec534 290 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.9E-40 T 11-10-2018 VSVS12_02362 b403edaa14adf8e221e94e343e0ec534 290 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.9E-40 T 11-10-2018 VSVS12_02362 b403edaa14adf8e221e94e343e0ec534 290 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.9E-40 T 11-10-2018 VSVS12_02362 b403edaa14adf8e221e94e343e0ec534 290 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.9E-40 T 11-10-2018 VSVS12_02362 b403edaa14adf8e221e94e343e0ec534 290 SMART SM00881 4 100 8.3E-37 T 11-10-2018 IPR003781 CoA-binding GO:0048037 VSVS12_02362 b403edaa14adf8e221e94e343e0ec534 290 Pfam PF00549 CoA-ligase 151 270 1.3E-21 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VSVS12_02362 b403edaa14adf8e221e94e343e0ec534 290 Pfam PF02629 CoA binding domain 6 99 5.3E-31 T 11-10-2018 IPR003781 CoA-binding GO:0048037 VSVS12_03329 70039a40f09d969e5fe0b483fc2d9409 463 TIGRFAM TIGR00797 matE: MATE efflux family protein 24 427 1.3E-95 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VSVS12_03329 70039a40f09d969e5fe0b483fc2d9409 463 Pfam PF01554 MatE 249 409 1.3E-31 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VSVS12_03329 70039a40f09d969e5fe0b483fc2d9409 463 Pfam PF01554 MatE 24 183 3.6E-32 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VSVS12_03329 70039a40f09d969e5fe0b483fc2d9409 463 PIRSF PIRSF006603 15 459 1.3E-61 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VSVS12_00665 fbd4cadf6e11cd31463483e2eee5f3df 580 Pfam PF01368 DHH family 72 204 1.0E-8 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VSVS12_00665 fbd4cadf6e11cd31463483e2eee5f3df 580 Gene3D G3DSA:3.90.1640.30 46 324 7.5E-88 T 11-10-2018 VSVS12_00665 fbd4cadf6e11cd31463483e2eee5f3df 580 Pfam PF02272 DHHA1 domain 320 452 2.4E-27 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 VSVS12_00665 fbd4cadf6e11cd31463483e2eee5f3df 580 SUPERFAMILY SSF64182 46 463 6.28E-115 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily VSVS12_00665 fbd4cadf6e11cd31463483e2eee5f3df 580 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 22 576 5.6E-156 T 11-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 VSVS12_00665 fbd4cadf6e11cd31463483e2eee5f3df 580 Gene3D G3DSA:3.10.310.30 326 456 1.4E-30 T 11-10-2018 VSVS12_01244 41cef7dbc2fa1ec91815ae74331a666f 267 Gene3D G3DSA:3.20.10.10 112 267 1.3E-51 T 11-10-2018 VSVS12_01244 41cef7dbc2fa1ec91815ae74331a666f 267 ProSitePatterns PS00770 Aminotransferases class-IV signature. 173 202 - T 11-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 VSVS12_01244 41cef7dbc2fa1ec91815ae74331a666f 267 Gene3D G3DSA:3.30.470.10 1 106 1.5E-25 T 11-10-2018 VSVS12_01244 41cef7dbc2fa1ec91815ae74331a666f 267 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 263 1.7E-103 T 11-10-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 VSVS12_01244 41cef7dbc2fa1ec91815ae74331a666f 267 SUPERFAMILY SSF56752 2 262 1.44E-65 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 VSVS12_01244 41cef7dbc2fa1ec91815ae74331a666f 267 Pfam PF01063 Amino-transferase class IV 26 247 1.0E-42 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 VSVS12_04231 11e8c3f55767521e6c3956aa99c10e2b 567 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 139 148 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VSVS12_04231 11e8c3f55767521e6c3956aa99c10e2b 567 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 208 313 3.9E-24 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VSVS12_04231 11e8c3f55767521e6c3956aa99c10e2b 567 SUPERFAMILY SSF53738 29 218 2.04E-43 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VSVS12_04231 11e8c3f55767521e6c3956aa99c10e2b 567 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 294 309 2.0E-6 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VSVS12_04231 11e8c3f55767521e6c3956aa99c10e2b 567 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 227 246 2.0E-6 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VSVS12_04231 11e8c3f55767521e6c3956aa99c10e2b 567 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 138 152 2.0E-6 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VSVS12_04231 11e8c3f55767521e6c3956aa99c10e2b 567 Gene3D G3DSA:3.30.310.50 464 553 9.9E-6 T 11-10-2018 VSVS12_04231 11e8c3f55767521e6c3956aa99c10e2b 567 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 41 180 1.1E-40 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VSVS12_04231 11e8c3f55767521e6c3956aa99c10e2b 567 SUPERFAMILY SSF53738 302 445 1.88E-30 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VSVS12_04231 11e8c3f55767521e6c3956aa99c10e2b 567 SUPERFAMILY SSF53738 204 312 3.61E-20 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VSVS12_04231 11e8c3f55767521e6c3956aa99c10e2b 567 Gene3D G3DSA:3.40.120.10 324 444 1.3E-31 T 11-10-2018 VSVS12_04231 11e8c3f55767521e6c3956aa99c10e2b 567 Gene3D G3DSA:3.40.120.10 32 185 2.3E-46 T 11-10-2018 VSVS12_04231 11e8c3f55767521e6c3956aa99c10e2b 567 SUPERFAMILY SSF55957 436 535 1.96E-12 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VSVS12_04231 11e8c3f55767521e6c3956aa99c10e2b 567 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 479 534 1.5E-8 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VSVS12_04231 11e8c3f55767521e6c3956aa99c10e2b 567 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 322 440 5.8E-18 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VSVS12_04231 11e8c3f55767521e6c3956aa99c10e2b 567 Gene3D G3DSA:3.40.120.10 203 323 9.8E-21 T 11-10-2018 VSVS12_04572 9e774e96d00eecea0657a7ef41e94da2 293 Gene3D G3DSA:3.20.20.150 2 287 1.1E-64 T 11-10-2018 VSVS12_04572 9e774e96d00eecea0657a7ef41e94da2 293 TIGRFAM TIGR00542 hxl6Piso_put: putative hexulose-6-phosphate isomerase 7 285 7.7E-95 T 11-10-2018 IPR004560 L-ribulose-5-phosphate 3-epimerase GO:0005975|GO:0016861 KEGG: 00040+5.1.3.22|KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961 VSVS12_04572 9e774e96d00eecea0657a7ef41e94da2 293 Pfam PF01261 Xylose isomerase-like TIM barrel 28 238 3.4E-32 T 11-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain VSVS12_04572 9e774e96d00eecea0657a7ef41e94da2 293 SUPERFAMILY SSF51658 3 275 2.75E-49 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily VSVS12_01083 8e96804d05f02f66a90280d873d27cd5 647 Pfam PF01751 Toprim domain 4 124 1.5E-16 T 11-10-2018 IPR006171 TOPRIM domain VSVS12_01083 8e96804d05f02f66a90280d873d27cd5 647 Gene3D G3DSA:1.10.460.10 163 602 1.0E-162 T 11-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 VSVS12_01083 8e96804d05f02f66a90280d873d27cd5 647 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 321 336 - T 11-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 VSVS12_01083 8e96804d05f02f66a90280d873d27cd5 647 SUPERFAMILY SSF56712 3 612 5.76E-183 T 11-10-2018 IPR023405 DNA topoisomerase, type IA, core domain VSVS12_01083 8e96804d05f02f66a90280d873d27cd5 647 Hamap MF_00953 DNA topoisomerase 3 [topB]. 2 647 64.088 T 11-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 VSVS12_01083 8e96804d05f02f66a90280d873d27cd5 647 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 613 5.4E-234 T 11-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 VSVS12_01083 8e96804d05f02f66a90280d873d27cd5 647 Gene3D G3DSA:1.10.290.10 293 422 1.0E-162 T 11-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 VSVS12_01083 8e96804d05f02f66a90280d873d27cd5 647 SMART SM00493 2 125 5.0E-27 T 11-10-2018 IPR006171 TOPRIM domain VSVS12_01083 8e96804d05f02f66a90280d873d27cd5 647 Gene3D G3DSA:3.40.50.140 2 157 3.4E-60 T 11-10-2018 VSVS12_01083 8e96804d05f02f66a90280d873d27cd5 647 SMART SM00437 284 563 1.7E-89 T 11-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 VSVS12_01083 8e96804d05f02f66a90280d873d27cd5 647 Pfam PF01131 DNA topoisomerase 159 597 4.2E-115 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VSVS12_01083 8e96804d05f02f66a90280d873d27cd5 647 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 327 336 3.8E-26 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VSVS12_01083 8e96804d05f02f66a90280d873d27cd5 647 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 408 424 3.8E-26 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VSVS12_01083 8e96804d05f02f66a90280d873d27cd5 647 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 194 212 3.8E-26 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VSVS12_01083 8e96804d05f02f66a90280d873d27cd5 647 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 99 112 3.8E-26 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VSVS12_01083 8e96804d05f02f66a90280d873d27cd5 647 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 526 540 3.8E-26 T 11-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 VSVS12_01083 8e96804d05f02f66a90280d873d27cd5 647 Gene3D G3DSA:2.70.20.10 218 493 1.0E-162 T 11-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 VSVS12_01083 8e96804d05f02f66a90280d873d27cd5 647 SMART SM00436 129 224 3.7E-29 T 11-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 VSVS12_02251 70575282873bc9ba1f59a0015b5ec338 727 Gene3D G3DSA:2.40.50.180 608 673 4.5E-34 T 11-10-2018 VSVS12_02251 70575282873bc9ba1f59a0015b5ec338 727 SMART SM00387 442 585 5.9E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_02251 70575282873bc9ba1f59a0015b5ec338 727 Pfam PF01584 CheW-like domain 591 720 3.5E-21 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VSVS12_02251 70575282873bc9ba1f59a0015b5ec338 727 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 445 584 5.3E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_02251 70575282873bc9ba1f59a0015b5ec338 727 SUPERFAMILY SSF55874 400 583 1.83E-38 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_02251 70575282873bc9ba1f59a0015b5ec338 727 Gene3D G3DSA:2.30.30.40 585 714 4.5E-34 T 11-10-2018 VSVS12_02251 70575282873bc9ba1f59a0015b5ec338 727 SUPERFAMILY SSF47226 6 127 1.44E-31 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 VSVS12_02251 70575282873bc9ba1f59a0015b5ec338 727 SMART SM00073 6 103 8.7E-19 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VSVS12_02251 70575282873bc9ba1f59a0015b5ec338 727 SUPERFAMILY SSF47384 339 398 3.41E-13 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VSVS12_02251 70575282873bc9ba1f59a0015b5ec338 727 SUPERFAMILY SSF50341 584 718 4.84E-29 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VSVS12_02251 70575282873bc9ba1f59a0015b5ec338 727 Gene3D G3DSA:1.10.287.560 338 397 2.1E-18 T 11-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 VSVS12_02251 70575282873bc9ba1f59a0015b5ec338 727 SMART SM00260 577 718 5.2E-34 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VSVS12_02251 70575282873bc9ba1f59a0015b5ec338 727 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 338 397 1.4E-11 T 11-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 VSVS12_02251 70575282873bc9ba1f59a0015b5ec338 727 SMART SM01231 337 397 1.5E-16 T 11-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 VSVS12_02251 70575282873bc9ba1f59a0015b5ec338 727 Pfam PF01627 Hpt domain 8 99 2.3E-18 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VSVS12_02251 70575282873bc9ba1f59a0015b5ec338 727 Gene3D G3DSA:1.20.120.160 2 141 8.6E-37 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 VSVS12_02251 70575282873bc9ba1f59a0015b5ec338 727 Gene3D G3DSA:3.30.565.10 398 584 1.2E-54 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_02251 70575282873bc9ba1f59a0015b5ec338 727 PRINTS PR00344 Bacterial sensor protein C-terminal signature 545 563 7.7E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_02251 70575282873bc9ba1f59a0015b5ec338 727 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 501 7.7E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_02251 70575282873bc9ba1f59a0015b5ec338 727 PRINTS PR00344 Bacterial sensor protein C-terminal signature 529 539 7.7E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_02251 70575282873bc9ba1f59a0015b5ec338 727 PRINTS PR00344 Bacterial sensor protein C-terminal signature 569 582 7.7E-12 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_00422 fbc5e62f54b9376390049ffa0d0f6166 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 82 242 6.1E-71 T 11-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 VSVS12_00422 fbc5e62f54b9376390049ffa0d0f6166 273 PIRSF PIRSF000441 75 268 5.5E-53 T 11-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 VSVS12_00422 fbc5e62f54b9376390049ffa0d0f6166 273 PIRSF PIRSF000441 7 70 210.0 T 11-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 VSVS12_00422 fbc5e62f54b9376390049ffa0d0f6166 273 SMART SM00971 9 113 2.3E-60 T 11-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 VSVS12_00422 fbc5e62f54b9376390049ffa0d0f6166 273 Pfam PF06426 Serine acetyltransferase, N-terminal 9 112 5.0E-38 T 11-10-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 VSVS12_00422 fbc5e62f54b9376390049ffa0d0f6166 273 Gene3D G3DSA:1.10.3130.10 1 142 2.0E-51 T 11-10-2018 VSVS12_00422 fbc5e62f54b9376390049ffa0d0f6166 273 SUPERFAMILY SSF51161 8 258 3.76E-62 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily VSVS12_00422 fbc5e62f54b9376390049ffa0d0f6166 273 Gene3D G3DSA:2.160.10.10 143 273 1.3E-35 T 11-10-2018 VSVS12_00422 fbc5e62f54b9376390049ffa0d0f6166 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 7.2E-6 T 11-10-2018 IPR001451 Hexapeptide repeat VSVS12_00422 fbc5e62f54b9376390049ffa0d0f6166 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VSVS12_03803 c8be0cd531bde7311209743769bf0243 1050 SUPERFAMILY SSF82866 809 1035 3.66E-42 T 11-10-2018 VSVS12_03803 c8be0cd531bde7311209743769bf0243 1050 SUPERFAMILY SSF82693 565 674 1.78E-21 T 11-10-2018 VSVS12_03803 c8be0cd531bde7311209743769bf0243 1050 Gene3D G3DSA:1.20.1640.10 9 512 2.2E-300 T 11-10-2018 VSVS12_03803 c8be0cd531bde7311209743769bf0243 1050 SUPERFAMILY SSF82866 298 500 7.72E-47 T 11-10-2018 VSVS12_03803 c8be0cd531bde7311209743769bf0243 1050 Gene3D G3DSA:3.30.70.1440 672 869 2.2E-300 T 11-10-2018 VSVS12_03803 c8be0cd531bde7311209743769bf0243 1050 Gene3D G3DSA:3.30.2090.10 724 812 2.2E-300 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VSVS12_03803 c8be0cd531bde7311209743769bf0243 1050 PRINTS PR00702 Acriflavin resistance protein family signature 338 361 1.2E-88 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_03803 c8be0cd531bde7311209743769bf0243 1050 PRINTS PR00702 Acriflavin resistance protein family signature 621 635 1.2E-88 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_03803 c8be0cd531bde7311209743769bf0243 1050 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 1.2E-88 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_03803 c8be0cd531bde7311209743769bf0243 1050 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 1.2E-88 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_03803 c8be0cd531bde7311209743769bf0243 1050 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 1.2E-88 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_03803 c8be0cd531bde7311209743769bf0243 1050 PRINTS PR00702 Acriflavin resistance protein family signature 393 417 1.2E-88 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_03803 c8be0cd531bde7311209743769bf0243 1050 PRINTS PR00702 Acriflavin resistance protein family signature 365 386 1.2E-88 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_03803 c8be0cd531bde7311209743769bf0243 1050 PRINTS PR00702 Acriflavin resistance protein family signature 448 471 1.2E-88 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_03803 c8be0cd531bde7311209743769bf0243 1050 PRINTS PR00702 Acriflavin resistance protein family signature 473 496 1.2E-88 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_03803 c8be0cd531bde7311209743769bf0243 1050 Gene3D G3DSA:3.30.70.1320 134 334 2.2E-300 T 11-10-2018 VSVS12_03803 c8be0cd531bde7311209743769bf0243 1050 SUPERFAMILY SSF82693 136 332 9.42E-21 T 11-10-2018 VSVS12_03803 c8be0cd531bde7311209743769bf0243 1050 Gene3D G3DSA:1.20.1640.10 513 1027 2.2E-300 T 11-10-2018 VSVS12_03803 c8be0cd531bde7311209743769bf0243 1050 Pfam PF00873 AcrB/AcrD/AcrF family 3 1030 0.0 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_03803 c8be0cd531bde7311209743769bf0243 1050 SUPERFAMILY SSF82693 39 132 1.36E-25 T 11-10-2018 VSVS12_03803 c8be0cd531bde7311209743769bf0243 1050 SUPERFAMILY SSF82714 725 809 1.83E-19 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VSVS12_03803 c8be0cd531bde7311209743769bf0243 1050 SUPERFAMILY SSF82714 184 273 1.09E-21 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VSVS12_03803 c8be0cd531bde7311209743769bf0243 1050 Gene3D G3DSA:3.30.70.1430 39 820 2.2E-300 T 11-10-2018 VSVS12_03803 c8be0cd531bde7311209743769bf0243 1050 Gene3D G3DSA:3.30.70.1430 567 671 2.2E-300 T 11-10-2018 VSVS12_03803 c8be0cd531bde7311209743769bf0243 1050 Gene3D G3DSA:3.30.2090.10 180 277 2.2E-300 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VSVS12_03803 c8be0cd531bde7311209743769bf0243 1050 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1033 0.0 T 11-10-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0006855|GO:0015562|GO:0016021 VSVS12_00440 cc647168298dbfcaf4aecbcad5d617cb 572 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 516 549 - T 11-10-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 VSVS12_00440 cc647168298dbfcaf4aecbcad5d617cb 572 Gene3D G3DSA:3.30.1370.120 254 318 5.5E-10 T 11-10-2018 IPR038591 NolW-like superfamily VSVS12_00440 cc647168298dbfcaf4aecbcad5d617cb 572 PRINTS PR00811 Bacterial general secretion pathway protein D signature 535 553 4.2E-19 T 11-10-2018 IPR001775 GspD/PilQ family VSVS12_00440 cc647168298dbfcaf4aecbcad5d617cb 572 PRINTS PR00811 Bacterial general secretion pathway protein D signature 558 572 4.2E-19 T 11-10-2018 IPR001775 GspD/PilQ family VSVS12_00440 cc647168298dbfcaf4aecbcad5d617cb 572 PRINTS PR00811 Bacterial general secretion pathway protein D signature 408 432 4.2E-19 T 11-10-2018 IPR001775 GspD/PilQ family VSVS12_00440 cc647168298dbfcaf4aecbcad5d617cb 572 PRINTS PR00811 Bacterial general secretion pathway protein D signature 321 331 4.2E-19 T 11-10-2018 IPR001775 GspD/PilQ family VSVS12_00440 cc647168298dbfcaf4aecbcad5d617cb 572 Pfam PF03958 Bacterial type II/III secretion system short domain 257 321 4.8E-13 T 11-10-2018 IPR005644 NolW-like VSVS12_00440 cc647168298dbfcaf4aecbcad5d617cb 572 Pfam PF00263 Bacterial type II and III secretion system protein 412 570 2.0E-46 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 VSVS12_00440 cc647168298dbfcaf4aecbcad5d617cb 572 Gene3D G3DSA:3.55.50.30 141 253 2.0E-34 T 11-10-2018 VSVS12_00440 cc647168298dbfcaf4aecbcad5d617cb 572 SMART SM00965 182 230 1.7E-9 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 VSVS12_00440 cc647168298dbfcaf4aecbcad5d617cb 572 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 158 570 1.8E-157 T 11-10-2018 IPR013355 Type IV pilus secretin PilQ VSVS12_00440 cc647168298dbfcaf4aecbcad5d617cb 572 Gene3D G3DSA:2.60.40.3470 23 140 3.6E-16 T 11-10-2018 VSVS12_02985 dc021c8b4a1acfa5c75953ef69adf733 329 SUPERFAMILY SSF55785 4 88 3.4E-5 T 11-10-2018 IPR035965 PAS domain superfamily VSVS12_02985 dc021c8b4a1acfa5c75953ef69adf733 329 Gene3D G3DSA:3.30.450.20 2 144 4.2E-6 T 11-10-2018 VSVS12_02985 dc021c8b4a1acfa5c75953ef69adf733 329 Pfam PF00990 Diguanylate cyclase, GGDEF domain 148 303 1.7E-43 T 11-10-2018 IPR000160 GGDEF domain VSVS12_02985 dc021c8b4a1acfa5c75953ef69adf733 329 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 143 306 3.9E-48 T 11-10-2018 IPR000160 GGDEF domain VSVS12_02985 dc021c8b4a1acfa5c75953ef69adf733 329 SMART SM00267 136 308 1.1E-48 T 11-10-2018 IPR000160 GGDEF domain VSVS12_02985 dc021c8b4a1acfa5c75953ef69adf733 329 Gene3D G3DSA:3.30.70.270 145 311 2.7E-55 T 11-10-2018 VSVS12_02985 dc021c8b4a1acfa5c75953ef69adf733 329 SUPERFAMILY SSF55073 152 310 6.59E-48 T 11-10-2018 IPR029787 Nucleotide cyclase VSVS12_03848 0939846eacce45cf870bfc5e7859209a 726 Pfam PF13515 Fusaric acid resistance protein-like 404 523 4.4E-24 T 11-10-2018 VSVS12_03848 0939846eacce45cf870bfc5e7859209a 726 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 10 711 0.0 T 11-10-2018 IPR010019 Integral membrane protein, YccS VSVS12_03848 0939846eacce45cf870bfc5e7859209a 726 Pfam PF12805 FUSC-like inner membrane protein yccS 68 347 1.9E-112 T 11-10-2018 IPR032692 Integral membrane protein YccS, N-terminal VSVS12_03848 0939846eacce45cf870bfc5e7859209a 726 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 10 710 2.6E-244 T 11-10-2018 IPR010020 Integral membrane protein, YccS/YhfK VSVS12_04246 4f110c5c7725e0037a55b775d94e3823 240 Pfam PF06149 Protein of unknown function (DUF969) 4 218 1.1E-82 T 11-10-2018 IPR010374 Protein of unknown function DUF969 VSVS12_01482 9c6ddf41621304fd34b8467df5530034 460 Hamap MF_00900 GTPase HflX [hflX]. 31 431 42.351 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 VSVS12_01482 9c6ddf41621304fd34b8467df5530034 460 Pfam PF01926 50S ribosome-binding GTPase 243 361 1.1E-17 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 VSVS12_01482 9c6ddf41621304fd34b8467df5530034 460 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 123 398 5.3E-97 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 VSVS12_01482 9c6ddf41621304fd34b8467df5530034 460 SUPERFAMILY SSF52540 241 411 6.94E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01482 9c6ddf41621304fd34b8467df5530034 460 Gene3D G3DSA:3.40.50.300 242 411 9.1E-35 T 11-10-2018 VSVS12_01482 9c6ddf41621304fd34b8467df5530034 460 PIRSF PIRSF006809 2 460 3.3E-146 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 VSVS12_01482 9c6ddf41621304fd34b8467df5530034 460 Gene3D G3DSA:3.40.50.11060 104 188 2.8E-25 T 11-10-2018 VSVS12_01482 9c6ddf41621304fd34b8467df5530034 460 Gene3D G3DSA:3.40.50.11060 22 98 3.7E-5 T 11-10-2018 VSVS12_01482 9c6ddf41621304fd34b8467df5530034 460 Pfam PF13167 GTP-binding GTPase N-terminal 123 159 1.5E-11 T 11-10-2018 IPR025121 GTPase HflX, N-terminal VSVS12_01482 9c6ddf41621304fd34b8467df5530034 460 Pfam PF13167 GTP-binding GTPase N-terminal 29 75 3.1E-7 T 11-10-2018 IPR025121 GTPase HflX, N-terminal VSVS12_01482 9c6ddf41621304fd34b8467df5530034 460 Pfam PF16360 GTP-binding GTPase Middle Region 162 237 6.1E-20 T 11-10-2018 IPR032305 GTP-binding protein, middle domain VSVS12_01482 9c6ddf41621304fd34b8467df5530034 460 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 310 328 7.6E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 VSVS12_01482 9c6ddf41621304fd34b8467df5530034 460 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 243 263 7.6E-6 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 VSVS12_03856 f2ebd63a8a9df6004308081535468ccc 425 Gene3D G3DSA:2.160.10.10 288 405 7.0E-34 T 11-10-2018 VSVS12_03856 f2ebd63a8a9df6004308081535468ccc 425 Pfam PF00483 Nucleotidyl transferase 6 272 3.9E-67 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 VSVS12_03856 f2ebd63a8a9df6004308081535468ccc 425 SUPERFAMILY SSF53448 4 358 1.34E-75 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VSVS12_03856 f2ebd63a8a9df6004308081535468ccc 425 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 96 104 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VSVS12_03856 f2ebd63a8a9df6004308081535468ccc 425 SUPERFAMILY SSF51161 293 396 2.95E-17 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily VSVS12_03856 f2ebd63a8a9df6004308081535468ccc 425 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 1 404 48.84 T 11-10-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VSVS12_03856 f2ebd63a8a9df6004308081535468ccc 425 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 194 204 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VSVS12_03856 f2ebd63a8a9df6004308081535468ccc 425 Gene3D G3DSA:3.90.550.10 1 287 3.6E-91 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VSVS12_03856 f2ebd63a8a9df6004308081535468ccc 425 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 5 378 2.7E-147 T 11-10-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VSVS12_03856 f2ebd63a8a9df6004308081535468ccc 425 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 10 29 - T 11-10-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622|MetaCyc: PWY-7902 VSVS12_03455 a9b883ac22431df634e5b3861e3c1bad 480 Gene3D G3DSA:3.30.565.10 323 479 4.5E-27 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_03455 a9b883ac22431df634e5b3861e3c1bad 480 SUPERFAMILY SSF47384 258 326 1.31E-14 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VSVS12_03455 a9b883ac22431df634e5b3861e3c1bad 480 SUPERFAMILY SSF55874 316 479 1.96E-29 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_03455 a9b883ac22431df634e5b3861e3c1bad 480 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 376 478 1.2E-10 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_03455 a9b883ac22431df634e5b3861e3c1bad 480 Pfam PF00512 His Kinase A (phospho-acceptor) domain 265 326 4.9E-14 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_03455 a9b883ac22431df634e5b3861e3c1bad 480 Gene3D G3DSA:3.30.450.20 75 173 1.3E-6 T 11-10-2018 VSVS12_03455 a9b883ac22431df634e5b3861e3c1bad 480 SMART SM00387 372 480 7.9E-17 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_03455 a9b883ac22431df634e5b3861e3c1bad 480 Gene3D G3DSA:1.10.287.130 209 322 7.0E-15 T 11-10-2018 VSVS12_03455 a9b883ac22431df634e5b3861e3c1bad 480 SUPERFAMILY SSF103190 100 183 1.73E-11 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VSVS12_03455 a9b883ac22431df634e5b3861e3c1bad 480 SMART SM00388 262 327 3.8E-17 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_00916 024eb514ed39d1ee52573e618a719a6a 156 Pfam PF02590 Predicted SPOUT methyltransferase 1 154 1.5E-48 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 VSVS12_00916 024eb514ed39d1ee52573e618a719a6a 156 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 155 27.466 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 VSVS12_00916 024eb514ed39d1ee52573e618a719a6a 156 Gene3D G3DSA:3.40.1280.10 1 156 9.4E-52 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VSVS12_00916 024eb514ed39d1ee52573e618a719a6a 156 PIRSF PIRSF004505 1 155 7.3E-44 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 VSVS12_00916 024eb514ed39d1ee52573e618a719a6a 156 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 2 156 5.3E-78 T 11-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 VSVS12_00916 024eb514ed39d1ee52573e618a719a6a 156 SUPERFAMILY SSF75217 1 154 5.76E-50 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases VSVS12_00904 4bc567c16f63286e25348a287fcea3e6 183 SUPERFAMILY SSF56784 4 181 2.44E-48 T 11-10-2018 IPR036412 HAD-like superfamily VSVS12_00904 4bc567c16f63286e25348a287fcea3e6 183 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 4 150 9.9E-39 T 11-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 VSVS12_00904 4bc567c16f63286e25348a287fcea3e6 183 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 4 178 1.1E-82 T 11-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 VSVS12_00904 4bc567c16f63286e25348a287fcea3e6 183 Gene3D G3DSA:3.40.50.1000 2 183 1.7E-60 T 11-10-2018 IPR023214 HAD superfamily VSVS12_00904 4bc567c16f63286e25348a287fcea3e6 183 Pfam PF13242 HAD-hyrolase-like 107 173 1.6E-11 T 11-10-2018 VSVS12_00904 4bc567c16f63286e25348a287fcea3e6 183 PIRSF PIRSF004682 1 183 7.4E-65 T 11-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 VSVS12_00904 4bc567c16f63286e25348a287fcea3e6 183 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 5 149 9.0E-37 T 11-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 VSVS12_00645 12a3597961f097285f9a3c271f63bdeb 284 Pfam PF00226 DnaJ domain 218 279 8.9E-13 T 11-10-2018 IPR001623 DnaJ domain VSVS12_00645 12a3597961f097285f9a3c271f63bdeb 284 Gene3D G3DSA:1.10.3680.10 45 191 1.8E-26 T 11-10-2018 IPR029024 TerB-like VSVS12_00645 12a3597961f097285f9a3c271f63bdeb 284 SUPERFAMILY SSF158682 4 230 7.85E-33 T 11-10-2018 IPR029024 TerB-like VSVS12_00645 12a3597961f097285f9a3c271f63bdeb 284 SUPERFAMILY SSF46565 214 278 1.5E-17 T 11-10-2018 IPR036869 Chaperone J-domain superfamily VSVS12_00645 12a3597961f097285f9a3c271f63bdeb 284 Pfam PF05099 Tellurite resistance protein TerB 47 176 9.9E-19 T 11-10-2018 IPR007791 Co-chaperone DjlA, N-terminal VSVS12_00645 12a3597961f097285f9a3c271f63bdeb 284 SMART SM00271 217 282 1.1E-18 T 11-10-2018 IPR001623 DnaJ domain VSVS12_00645 12a3597961f097285f9a3c271f63bdeb 284 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 3 283 39.369 T 11-10-2018 IPR023749 Co-chaperone DjlA GO:0051087 VSVS12_00645 12a3597961f097285f9a3c271f63bdeb 284 PRINTS PR00625 DnaJ domain signature 220 238 1.7E-10 T 11-10-2018 IPR001623 DnaJ domain VSVS12_00645 12a3597961f097285f9a3c271f63bdeb 284 PRINTS PR00625 DnaJ domain signature 238 253 1.7E-10 T 11-10-2018 IPR001623 DnaJ domain VSVS12_00645 12a3597961f097285f9a3c271f63bdeb 284 PRINTS PR00625 DnaJ domain signature 262 282 1.7E-10 T 11-10-2018 IPR001623 DnaJ domain VSVS12_00645 12a3597961f097285f9a3c271f63bdeb 284 Gene3D G3DSA:1.10.287.110 197 282 7.5E-17 T 11-10-2018 IPR036869 Chaperone J-domain superfamily VSVS12_01498 32e43512da4af5f5ff25a68f290e7592 338 Pfam PF12833 Helix-turn-helix domain 262 335 7.8E-21 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VSVS12_01498 32e43512da4af5f5ff25a68f290e7592 338 SUPERFAMILY SSF46689 291 336 3.0E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_01498 32e43512da4af5f5ff25a68f290e7592 338 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 307 322 2.3E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VSVS12_01498 32e43512da4af5f5ff25a68f290e7592 338 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 322 338 2.3E-5 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VSVS12_01498 32e43512da4af5f5ff25a68f290e7592 338 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 292 334 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VSVS12_01498 32e43512da4af5f5ff25a68f290e7592 338 SMART SM00342 256 337 2.6E-25 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VSVS12_01498 32e43512da4af5f5ff25a68f290e7592 338 Gene3D G3DSA:1.10.10.60 236 337 3.4E-26 T 11-10-2018 VSVS12_00697 001bc716156775fce0bd589e9fd9940f 343 SUPERFAMILY SSF50331 270 343 4.0E-5 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VSVS12_00697 001bc716156775fce0bd589e9fd9940f 343 Pfam PF00005 ABC transporter 21 165 1.2E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_00697 001bc716156775fce0bd589e9fd9940f 343 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_00697 001bc716156775fce0bd589e9fd9940f 343 Pfam PF08402 TOBE domain 277 343 2.1E-4 T 11-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 VSVS12_00697 001bc716156775fce0bd589e9fd9940f 343 SUPERFAMILY SSF52540 5 245 7.01E-81 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00697 001bc716156775fce0bd589e9fd9940f 343 SMART SM00382 30 215 6.7E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_00697 001bc716156775fce0bd589e9fd9940f 343 Gene3D G3DSA:3.40.50.300 1 241 1.9E-74 T 11-10-2018 VSVS12_02084 005dc44452125cfb99c7c83e7ee397a0 380 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 230 239 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 VSVS12_02084 005dc44452125cfb99c7c83e7ee397a0 380 Pfam PF00155 Aminotransferase class I and II 43 373 1.6E-48 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VSVS12_02084 005dc44452125cfb99c7c83e7ee397a0 380 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 5 378 43.765 T 11-10-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 VSVS12_02084 005dc44452125cfb99c7c83e7ee397a0 380 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 22 375 7.7E-130 T 11-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 VSVS12_02084 005dc44452125cfb99c7c83e7ee397a0 380 Gene3D G3DSA:3.90.1150.10 43 370 1.9E-115 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VSVS12_02084 005dc44452125cfb99c7c83e7ee397a0 380 SUPERFAMILY SSF53383 5 375 2.99E-89 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VSVS12_02084 005dc44452125cfb99c7c83e7ee397a0 380 Gene3D G3DSA:3.40.640.10 59 281 1.9E-115 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VSVS12_00809 c54866dc408223a00358d3f4adbbbe29 107 TIGRFAM TIGR01997 sufA_proteo: FeS assembly scaffold SufA 2 107 2.3E-42 T 11-10-2018 IPR011298 FeS assembly scaffold SufA GO:0097428 VSVS12_00809 c54866dc408223a00358d3f4adbbbe29 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 6.9E-39 T 11-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 VSVS12_00809 c54866dc408223a00358d3f4adbbbe29 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 3.2E-26 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 VSVS12_00809 c54866dc408223a00358d3f4adbbbe29 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 1.8E-56 T 11-10-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 VSVS12_00809 c54866dc408223a00358d3f4adbbbe29 107 Gene3D G3DSA:2.60.300.12 2 107 2.6E-39 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VSVS12_00809 c54866dc408223a00358d3f4adbbbe29 107 SUPERFAMILY SSF89360 1 96 4.19E-34 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VSVS12_00809 c54866dc408223a00358d3f4adbbbe29 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 11-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 VSVS12_04275 adfd3e68db5de9445d533b3522b27791 245 Pfam PF00563 EAL domain 2 222 3.4E-59 T 11-10-2018 IPR001633 EAL domain VSVS12_04275 adfd3e68db5de9445d533b3522b27791 245 SMART SM00052 2 228 1.2E-58 T 11-10-2018 IPR001633 EAL domain VSVS12_04275 adfd3e68db5de9445d533b3522b27791 245 SUPERFAMILY SSF141868 2 235 3.01E-70 T 11-10-2018 IPR035919 EAL domain superfamily VSVS12_04275 adfd3e68db5de9445d533b3522b27791 245 Gene3D G3DSA:3.20.20.450 1 233 1.2E-72 T 11-10-2018 IPR035919 EAL domain superfamily VSVS12_02093 d2675ed5e20f53045e884f49db37959d 379 SUPERFAMILY SSF51197 5 293 7.28E-71 T 11-10-2018 VSVS12_02093 d2675ed5e20f53045e884f49db37959d 379 Gene3D G3DSA:2.60.120.650 1 207 5.1E-74 T 11-10-2018 VSVS12_02093 d2675ed5e20f53045e884f49db37959d 379 Pfam PF08007 Cupin superfamily protein 9 304 4.4E-86 T 11-10-2018 IPR003347 JmjC domain VSVS12_02093 d2675ed5e20f53045e884f49db37959d 379 Gene3D G3DSA:1.10.10.2510 208 379 3.0E-44 T 11-10-2018 VSVS12_02093 d2675ed5e20f53045e884f49db37959d 379 SMART SM00558 93 222 4.7E-5 T 11-10-2018 IPR003347 JmjC domain VSVS12_00808 8259016609c628bcc70878a278bcf485 126 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 125 2.0E-69 T 11-10-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 VSVS12_00808 8259016609c628bcc70878a278bcf485 126 SUPERFAMILY SSF82649 1 125 6.02E-48 T 11-10-2018 VSVS12_00808 8259016609c628bcc70878a278bcf485 126 Pfam PF01592 NifU-like N terminal domain 2 125 2.0E-56 T 11-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 VSVS12_00808 8259016609c628bcc70878a278bcf485 126 Gene3D G3DSA:3.90.1010.10 1 126 7.2E-59 T 11-10-2018 VSVS12_02023 c199d0d9d6512cc7048a59598f89850f 131 SUPERFAMILY SSF54637 9 129 3.74E-39 T 11-10-2018 IPR029069 HotDog domain superfamily VSVS12_02023 c199d0d9d6512cc7048a59598f89850f 131 Pfam PF03061 Thioesterase superfamily 26 98 6.7E-21 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 VSVS12_02023 c199d0d9d6512cc7048a59598f89850f 131 Gene3D G3DSA:3.10.129.10 1 131 1.0E-39 T 11-10-2018 VSVS12_01712 183ab53e42834144de017e5b66798ef3 276 PIRSF PIRSF015626 2 271 2.8E-97 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 VSVS12_01712 183ab53e42834144de017e5b66798ef3 276 Gene3D G3DSA:3.10.20.10 36 118 1.7E-9 T 11-10-2018 VSVS12_01712 183ab53e42834144de017e5b66798ef3 276 Pfam PF02634 FdhD/NarQ family 35 266 2.7E-72 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 VSVS12_01712 183ab53e42834144de017e5b66798ef3 276 SUPERFAMILY SSF53927 15 266 2.02E-70 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VSVS12_01712 183ab53e42834144de017e5b66798ef3 276 Gene3D G3DSA:3.40.140.10 122 274 1.0E-41 T 11-10-2018 VSVS12_01712 183ab53e42834144de017e5b66798ef3 276 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 11 267 26.113 T 11-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 VSVS12_02632 ead82736e6e4d22d8e73dcd5b01eca2a 505 Gene3D G3DSA:2.40.320.10 1 199 2.0E-36 T 11-10-2018 VSVS12_02632 ead82736e6e4d22d8e73dcd5b01eca2a 505 SMART SM00880 229 497 2.1E-20 T 11-10-2018 IPR007899 CHAD domain VSVS12_02632 ead82736e6e4d22d8e73dcd5b01eca2a 505 Pfam PF05235 CHAD domain 231 395 7.1E-9 T 11-10-2018 IPR007899 CHAD domain VSVS12_02632 ead82736e6e4d22d8e73dcd5b01eca2a 505 SMART SM01118 2 203 2.8E-41 T 11-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 VSVS12_02632 ead82736e6e4d22d8e73dcd5b01eca2a 505 Pfam PF01928 CYTH domain 3 197 5.9E-35 T 11-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 VSVS12_02632 ead82736e6e4d22d8e73dcd5b01eca2a 505 SUPERFAMILY SSF55154 1 215 1.05E-51 T 11-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 VSVS12_02632 ead82736e6e4d22d8e73dcd5b01eca2a 505 Gene3D G3DSA:1.40.20.10 211 441 1.4E-12 T 11-10-2018 IPR038186 CHAD domain superfamily VSVS12_02364 e24cb8586d21b77dbcfe8a672fea6c81 401 Gene3D G3DSA:2.40.50.100 1 79 1.7E-20 T 11-10-2018 VSVS12_02364 e24cb8586d21b77dbcfe8a672fea6c81 401 Gene3D G3DSA:4.10.320.10 102 152 2.1E-23 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 VSVS12_02364 e24cb8586d21b77dbcfe8a672fea6c81 401 Pfam PF02817 e3 binding domain 113 145 1.5E-13 T 11-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 VSVS12_02364 e24cb8586d21b77dbcfe8a672fea6c81 401 SUPERFAMILY SSF51230 1 95 4.19E-23 T 11-10-2018 IPR011053 Single hybrid motif VSVS12_02364 e24cb8586d21b77dbcfe8a672fea6c81 401 SUPERFAMILY SSF47005 106 150 2.35E-12 T 11-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 VSVS12_02364 e24cb8586d21b77dbcfe8a672fea6c81 401 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 11-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 VSVS12_02364 e24cb8586d21b77dbcfe8a672fea6c81 401 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 171 399 2.3E-81 T 11-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 VSVS12_02364 e24cb8586d21b77dbcfe8a672fea6c81 401 Gene3D G3DSA:3.30.559.10 169 401 1.4E-97 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VSVS12_02364 e24cb8586d21b77dbcfe8a672fea6c81 401 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 401 3.0E-186 T 11-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 VSVS12_02364 e24cb8586d21b77dbcfe8a672fea6c81 401 Pfam PF00364 Biotin-requiring enzyme 4 76 2.0E-16 T 11-10-2018 IPR000089 Biotin/lipoyl attachment VSVS12_02364 e24cb8586d21b77dbcfe8a672fea6c81 401 SUPERFAMILY SSF52777 172 400 2.13E-89 T 11-10-2018 VSVS12_00683 2e699dcfc524a67825e0dfa54956eb47 148 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 108 140 2.9E-10 T 11-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 VSVS12_00683 2e699dcfc524a67825e0dfa54956eb47 148 SUPERFAMILY SSF109635 9 107 7.06E-37 T 11-10-2018 IPR037187 DksA, N-terminal domain superfamily VSVS12_00683 2e699dcfc524a67825e0dfa54956eb47 148 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 25 147 29.687 T 11-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 VSVS12_00683 2e699dcfc524a67825e0dfa54956eb47 148 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 111 135 - T 11-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site VSVS12_00683 2e699dcfc524a67825e0dfa54956eb47 148 Gene3D G3DSA:1.20.120.910 17 147 5.2E-36 T 11-10-2018 VSVS12_00683 2e699dcfc524a67825e0dfa54956eb47 148 SUPERFAMILY SSF57716 108 146 5.13E-10 T 11-10-2018 VSVS12_00683 2e699dcfc524a67825e0dfa54956eb47 148 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 29 137 2.0E-51 T 11-10-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 VSVS12_00683 2e699dcfc524a67825e0dfa54956eb47 148 PRINTS PR00618 DksA/TraR zinc finger signature 111 122 8.9E-5 T 11-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria VSVS12_00683 2e699dcfc524a67825e0dfa54956eb47 148 PRINTS PR00618 DksA/TraR zinc finger signature 123 135 8.9E-5 T 11-10-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria VSVS12_02280 4418e5838700073376bccb828a8ffe66 670 SUPERFAMILY SSF51905 265 662 2.23E-28 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_02280 4418e5838700073376bccb828a8ffe66 670 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 116 241 3.1E-44 T 11-10-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 MetaCyc: PWY-7892 VSVS12_02280 4418e5838700073376bccb828a8ffe66 670 Pfam PF01266 FAD dependent oxidoreductase 265 634 2.5E-42 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VSVS12_02280 4418e5838700073376bccb828a8ffe66 670 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 265 664 5.8E-152 T 11-10-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 VSVS12_02280 4418e5838700073376bccb828a8ffe66 670 Gene3D G3DSA:3.40.50.150 7 252 9.7E-106 T 11-10-2018 VSVS12_02280 4418e5838700073376bccb828a8ffe66 670 Gene3D G3DSA:3.50.50.60 265 661 6.8E-135 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_02280 4418e5838700073376bccb828a8ffe66 670 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 5 659 27.617 T 11-10-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 MetaCyc: PWY-7892 VSVS12_02280 4418e5838700073376bccb828a8ffe66 670 Gene3D G3DSA:3.30.9.10 349 571 6.8E-135 T 11-10-2018 VSVS12_00838 f1bd3afd53e631a2d56ecec1bbbfaaec 185 SUPERFAMILY SSF54534 108 184 2.35E-9 T 11-10-2018 VSVS12_00838 f1bd3afd53e631a2d56ecec1bbbfaaec 185 PIRSF PIRSF006092 26 185 9.8E-9 T 11-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 VSVS12_00838 f1bd3afd53e631a2d56ecec1bbbfaaec 185 Gene3D G3DSA:3.10.50.30 106 185 3.0E-10 T 11-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 VSVS12_00838 f1bd3afd53e631a2d56ecec1bbbfaaec 185 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 109 184 7.9E-8 T 11-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 VSVS12_04156 a2d35b7f3a5717f7eb5130bdbe5ee87b 132 SUPERFAMILY SSF82784 1 131 5.23E-38 T 11-10-2018 IPR036102 OsmC/Ohr superfamily VSVS12_04156 a2d35b7f3a5717f7eb5130bdbe5ee87b 132 Pfam PF02566 OsmC-like protein 29 127 4.7E-17 T 11-10-2018 IPR003718 OsmC/Ohr family VSVS12_04156 a2d35b7f3a5717f7eb5130bdbe5ee87b 132 Gene3D G3DSA:2.20.25.10 1 34 1.6E-18 T 11-10-2018 VSVS12_04156 a2d35b7f3a5717f7eb5130bdbe5ee87b 132 Gene3D G3DSA:3.30.300.20 35 132 2.2E-23 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta VSVS12_00222 c916ce48e9f839cfc1061062e55249ac 314 Gene3D G3DSA:3.20.10.10 138 289 1.0E-106 T 11-10-2018 VSVS12_00222 c916ce48e9f839cfc1061062e55249ac 314 Gene3D G3DSA:3.30.470.10 10 127 1.0E-106 T 11-10-2018 VSVS12_00222 c916ce48e9f839cfc1061062e55249ac 314 SUPERFAMILY SSF56752 7 307 3.79E-104 T 11-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 VSVS12_00222 c916ce48e9f839cfc1061062e55249ac 314 Pfam PF01063 Amino-transferase class IV 36 267 1.7E-44 T 11-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 VSVS12_00222 c916ce48e9f839cfc1061062e55249ac 314 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 10 307 1.5E-141 T 11-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 VSVS12_00222 c916ce48e9f839cfc1061062e55249ac 314 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 223 - T 11-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 VSVS12_02019 50f2f316f3da3ff670d50d90cb5985ba 98 SMART SM00411 3 92 3.3E-43 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VSVS12_02019 50f2f316f3da3ff670d50d90cb5985ba 98 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 3.4E-17 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VSVS12_02019 50f2f316f3da3ff670d50d90cb5985ba 98 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 3.4E-17 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VSVS12_02019 50f2f316f3da3ff670d50d90cb5985ba 98 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 3.4E-17 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VSVS12_02019 50f2f316f3da3ff670d50d90cb5985ba 98 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 94 3.4E-49 T 11-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 VSVS12_02019 50f2f316f3da3ff670d50d90cb5985ba 98 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VSVS12_02019 50f2f316f3da3ff670d50d90cb5985ba 98 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 30.338 T 11-10-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 VSVS12_02019 50f2f316f3da3ff670d50d90cb5985ba 98 Gene3D G3DSA:4.10.520.10 1 97 4.7E-38 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VSVS12_02019 50f2f316f3da3ff670d50d90cb5985ba 98 Pfam PF00216 Bacterial DNA-binding protein 3 91 3.6E-33 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VSVS12_02019 50f2f316f3da3ff670d50d90cb5985ba 98 SUPERFAMILY SSF47729 3 93 7.95E-33 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VSVS12_02329 6e50727a4406c18553508fe57630b5f0 115 Gene3D G3DSA:3.40.30.10 2 115 7.6E-43 T 11-10-2018 VSVS12_02329 6e50727a4406c18553508fe57630b5f0 115 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 4 112 7.9E-32 T 11-10-2018 IPR006504 Transcriptional regulator Spx/MgsR VSVS12_02329 6e50727a4406c18553508fe57630b5f0 115 SUPERFAMILY SSF52833 3 114 3.85E-36 T 11-10-2018 IPR036249 Thioredoxin-like superfamily VSVS12_02329 6e50727a4406c18553508fe57630b5f0 115 Pfam PF03960 ArsC family 6 112 9.5E-18 T 11-10-2018 IPR006660 Arsenate reductase-like VSVS12_02714 5b570754f628ac418c4de50bc3b87a54 142 Gene3D G3DSA:3.10.450.430 2 142 9.3E-46 T 11-10-2018 VSVS12_02714 5b570754f628ac418c4de50bc3b87a54 142 Pfam PF10980 Protein of unknown function (DUF2787) 17 140 1.9E-37 T 11-10-2018 IPR021248 Protein of unknown function DUF2787 VSVS12_03092 2db432ae14e898efac13646e4d7562d5 731 SUPERFAMILY SSF51055 509 558 4.97E-14 T 11-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VSVS12_03092 2db432ae14e898efac13646e4d7562d5 731 Gene3D G3DSA:2.60.40.10 350 428 4.9E-23 T 11-10-2018 IPR013783 Immunoglobulin-like fold VSVS12_03092 2db432ae14e898efac13646e4d7562d5 731 Pfam PF00704 Glycosyl hydrolases family 18 37 320 4.6E-35 T 11-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 VSVS12_03092 2db432ae14e898efac13646e4d7562d5 731 SMART SM00495 677 727 1.5E-7 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VSVS12_03092 2db432ae14e898efac13646e4d7562d5 731 SMART SM00495 512 557 2.3E-15 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VSVS12_03092 2db432ae14e898efac13646e4d7562d5 731 Gene3D G3DSA:3.20.20.80 29 349 2.3E-95 T 11-10-2018 VSVS12_03092 2db432ae14e898efac13646e4d7562d5 731 ProSitePatterns PS01095 Chitinases family 18 active site. 149 157 - T 11-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 VSVS12_03092 2db432ae14e898efac13646e4d7562d5 731 Pfam PF16403 Domain of unknown function (DUF5011) 358 428 1.5E-17 T 11-10-2018 IPR032179 Domain of unknown function DUF5011 VSVS12_03092 2db432ae14e898efac13646e4d7562d5 731 Pfam PF16403 Domain of unknown function (DUF5011) 436 505 5.5E-16 T 11-10-2018 IPR032179 Domain of unknown function DUF5011 VSVS12_03092 2db432ae14e898efac13646e4d7562d5 731 Gene3D G3DSA:2.60.40.10 429 508 5.1E-25 T 11-10-2018 IPR013783 Immunoglobulin-like fold VSVS12_03092 2db432ae14e898efac13646e4d7562d5 731 Gene3D G3DSA:2.10.10.20 512 555 3.5E-18 T 11-10-2018 VSVS12_03092 2db432ae14e898efac13646e4d7562d5 731 SUPERFAMILY SSF51445 34 330 2.85E-57 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily VSVS12_03092 2db432ae14e898efac13646e4d7562d5 731 SMART SM00636 35 320 0.0025 T 11-10-2018 IPR011583 Chitinase II GO:0008061 VSVS12_03092 2db432ae14e898efac13646e4d7562d5 731 Gene3D G3DSA:2.60.40.2550 572 662 3.2E-5 T 11-10-2018 VSVS12_00345 27b6dd66eee42c4aa1c92bdc0188c514 204 SUPERFAMILY SSF52317 3 203 1.0E-55 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like VSVS12_00345 27b6dd66eee42c4aa1c92bdc0188c514 204 Pfam PF00117 Glutamine amidotransferase class-I 5 202 6.0E-22 T 11-10-2018 IPR017926 Glutamine amidotransferase VSVS12_00345 27b6dd66eee42c4aa1c92bdc0188c514 204 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 3 203 1.7E-71 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 VSVS12_00345 27b6dd66eee42c4aa1c92bdc0188c514 204 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 2 204 35.984 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 VSVS12_00345 27b6dd66eee42c4aa1c92bdc0188c514 204 PIRSF PIRSF000495 1 204 2.9E-72 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 VSVS12_00345 27b6dd66eee42c4aa1c92bdc0188c514 204 Gene3D G3DSA:3.40.50.880 1 204 9.8E-75 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like VSVS12_01716 dad583b789041ff57ea5c37896319612 313 SUPERFAMILY SSF51735 116 243 1.73E-30 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_01716 dad583b789041ff57ea5c37896319612 313 SMART SM00829 7 307 5.9E-19 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VSVS12_01716 dad583b789041ff57ea5c37896319612 313 Pfam PF13602 Zinc-binding dehydrogenase 185 307 6.9E-23 T 11-10-2018 VSVS12_01716 dad583b789041ff57ea5c37896319612 313 Gene3D G3DSA:3.40.50.720 125 258 5.1E-87 T 11-10-2018 VSVS12_01716 dad583b789041ff57ea5c37896319612 313 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 24 87 1.2E-9 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VSVS12_01716 dad583b789041ff57ea5c37896319612 313 SUPERFAMILY SSF50129 1 158 4.57E-37 T 11-10-2018 IPR011032 GroES-like superfamily VSVS12_01716 dad583b789041ff57ea5c37896319612 313 Gene3D G3DSA:3.90.180.10 16 307 5.1E-87 T 11-10-2018 VSVS12_02473 5e16552130ac3af70548c6e32564a2c1 272 Pfam PF00005 ABC transporter 41 197 8.6E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_02473 5e16552130ac3af70548c6e32564a2c1 272 SUPERFAMILY SSF52540 22 258 8.11E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02473 5e16552130ac3af70548c6e32564a2c1 272 Gene3D G3DSA:3.40.50.300 21 268 2.6E-65 T 11-10-2018 VSVS12_02473 5e16552130ac3af70548c6e32564a2c1 272 SMART SM00382 50 252 5.5E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_02473 5e16552130ac3af70548c6e32564a2c1 272 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_02473 5e16552130ac3af70548c6e32564a2c1 272 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 26 272 5.3E-123 T 11-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 VSVS12_03773 849fd4b82890a94b51e18c046118de16 551 SUPERFAMILY SSF52540 228 410 2.9E-6 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03773 849fd4b82890a94b51e18c046118de16 551 Pfam PF09818 Predicted ATPase of the ABC class 2 437 3.4E-184 T 11-10-2018 IPR019195 ABC transporter, ATPase, putative VSVS12_01011 ecf1a235458af1c92bcab4fd24bbb855 269 SUPERFAMILY SSF48452 190 253 1.49E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_01011 ecf1a235458af1c92bcab4fd24bbb855 269 Gene3D G3DSA:1.25.40.10 176 266 3.2E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_01011 ecf1a235458af1c92bcab4fd24bbb855 269 Pfam PF13371 Tetratricopeptide repeat 187 258 2.4E-22 T 11-10-2018 VSVS12_01011 ecf1a235458af1c92bcab4fd24bbb855 269 Pfam PF13369 Transglutaminase-like superfamily 33 184 2.0E-44 T 11-10-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 VSVS12_03486 b3232b4c09c406c4c4f5699c37cda5f6 365 Gene3D G3DSA:3.30.70.100 249 346 2.2E-15 T 11-10-2018 VSVS12_03486 b3232b4c09c406c4c4f5699c37cda5f6 365 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 212 246 - T 11-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 VSVS12_03486 b3232b4c09c406c4c4f5699c37cda5f6 365 SUPERFAMILY SSF82861 97 179 1.96E-13 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 VSVS12_03486 b3232b4c09c406c4c4f5699c37cda5f6 365 SUPERFAMILY SSF82689 252 351 5.1E-19 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 VSVS12_03486 b3232b4c09c406c4c4f5699c37cda5f6 365 Pfam PF00924 Mechanosensitive ion channel 138 341 4.5E-56 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VSVS12_03486 b3232b4c09c406c4c4f5699c37cda5f6 365 Gene3D G3DSA:2.30.30.60 196 246 6.5E-11 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily VSVS12_03486 b3232b4c09c406c4c4f5699c37cda5f6 365 SUPERFAMILY SSF50182 180 247 2.09E-18 T 11-10-2018 IPR010920 LSM domain superfamily VSVS12_04547 41be1a642d3467104245ac783ea4e26d 237 SMART SM01007 14 204 2.9E-61 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal VSVS12_04547 41be1a642d3467104245ac783ea4e26d 237 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 15 203 1.3E-44 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal VSVS12_04547 41be1a642d3467104245ac783ea4e26d 237 SUPERFAMILY SSF53639 10 226 6.87E-63 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily VSVS12_04547 41be1a642d3467104245ac783ea4e26d 237 Gene3D G3DSA:3.40.225.10 8 236 4.8E-60 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily VSVS12_01242 16e5d93e37112452fadb851e125cd962 77 SUPERFAMILY SSF47336 2 75 1.57E-23 T 11-10-2018 IPR036736 ACP-like superfamily VSVS12_01242 16e5d93e37112452fadb851e125cd962 77 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 76 1.3E-36 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 VSVS12_01242 16e5d93e37112452fadb851e125cd962 77 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 11-10-2018 IPR006162 Phosphopantetheine attachment site VSVS12_01242 16e5d93e37112452fadb851e125cd962 77 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.862 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 VSVS12_01242 16e5d93e37112452fadb851e125cd962 77 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 75 2.0E-11 T 11-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 VSVS12_01242 16e5d93e37112452fadb851e125cd962 77 Gene3D G3DSA:1.10.1200.10 1 76 3.7E-30 T 11-10-2018 IPR036736 ACP-like superfamily VSVS12_01242 16e5d93e37112452fadb851e125cd962 77 Pfam PF00550 Phosphopantetheine attachment site 6 73 2.1E-16 T 11-10-2018 IPR009081 Phosphopantetheine binding ACP domain VSVS12_02518 a8207778588219f84fb0a666e181ef3c 264 Pfam PF08666 SAF domain 46 108 4.6E-7 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 VSVS12_02518 a8207778588219f84fb0a666e181ef3c 264 SMART SM00858 44 109 0.004 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 VSVS12_02518 a8207778588219f84fb0a666e181ef3c 264 TIGRFAM TIGR03177 pilus_cpaB: Flp pilus assembly protein CpaB 10 226 2.6E-35 T 11-10-2018 IPR017592 Pilus assembly, Flp-type CpaB VSVS12_02518 a8207778588219f84fb0a666e181ef3c 264 Pfam PF16976 Flp pilus assembly protein RcpC/CpaB 117 226 3.8E-13 T 11-10-2018 IPR031571 Flp pilus assembly protein RcpC/CpaB domain VSVS12_00220 54f8c6a5a8ee58a18fd52a4c27f92287 520 Gene3D G3DSA:3.40.50.1100 31 333 4.1E-135 T 11-10-2018 VSVS12_00220 54f8c6a5a8ee58a18fd52a4c27f92287 520 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 21 519 2.6E-251 T 11-10-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 VSVS12_00220 54f8c6a5a8ee58a18fd52a4c27f92287 520 SUPERFAMILY SSF55021 343 429 5.95E-28 T 11-10-2018 VSVS12_00220 54f8c6a5a8ee58a18fd52a4c27f92287 520 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 59 72 - T 11-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 VSVS12_00220 54f8c6a5a8ee58a18fd52a4c27f92287 520 SUPERFAMILY SSF53686 20 371 5.11E-107 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VSVS12_00220 54f8c6a5a8ee58a18fd52a4c27f92287 520 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 35 322 5.5E-84 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VSVS12_00220 54f8c6a5a8ee58a18fd52a4c27f92287 520 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 433 519 6.3E-26 T 11-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 VSVS12_00220 54f8c6a5a8ee58a18fd52a4c27f92287 520 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 335 425 1.0E-25 T 11-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 VSVS12_00220 54f8c6a5a8ee58a18fd52a4c27f92287 520 Gene3D G3DSA:3.40.1020.10 344 520 1.8E-71 T 11-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 VSVS12_00220 54f8c6a5a8ee58a18fd52a4c27f92287 520 Gene3D G3DSA:3.40.50.1100 67 163 4.1E-135 T 11-10-2018 VSVS12_00220 54f8c6a5a8ee58a18fd52a4c27f92287 520 SUPERFAMILY SSF55021 426 519 1.58E-25 T 11-10-2018 VSVS12_03928 34cf08bb39e0819d6ae2ef7f1d6aeeb4 83 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 4 77 1.7E-26 T 11-10-2018 IPR018680 Protein of unknown function DUF2164 VSVS12_01567 d930d6314fb4fff415017f84190f0048 335 SUPERFAMILY SSF56529 76 333 1.98E-55 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VSVS12_01567 d930d6314fb4fff415017f84190f0048 335 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 80 333 3.8E-39 T 11-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 VSVS12_01567 d930d6314fb4fff415017f84190f0048 335 Gene3D G3DSA:3.90.850.10 1 335 4.1E-135 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VSVS12_00715 4f3a3b705dc6dada4e70b0da61cea24b 122 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 122 36.022 T 11-10-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 VSVS12_00715 4f3a3b705dc6dada4e70b0da61cea24b 122 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 103 120 - T 11-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 VSVS12_00715 4f3a3b705dc6dada4e70b0da61cea24b 122 SUPERFAMILY SSF89360 16 111 8.63E-30 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VSVS12_00715 4f3a3b705dc6dada4e70b0da61cea24b 122 Pfam PF01521 Iron-sulphur cluster biosynthesis 17 117 1.0E-18 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 VSVS12_00715 4f3a3b705dc6dada4e70b0da61cea24b 122 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 17 122 5.1E-37 T 11-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 VSVS12_00715 4f3a3b705dc6dada4e70b0da61cea24b 122 Gene3D G3DSA:2.60.300.12 17 122 2.1E-32 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VSVS12_02986 069a105c15473c4a5817609e7a5d9071 146 SUPERFAMILY SSF46955 2 121 3.44E-34 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily VSVS12_02986 069a105c15473c4a5817609e7a5d9071 146 Gene3D G3DSA:1.10.1660.10 1 129 3.1E-36 T 11-10-2018 VSVS12_02986 069a105c15473c4a5817609e7a5d9071 146 SMART SM00422 2 71 5.4E-30 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VSVS12_02986 069a105c15473c4a5817609e7a5d9071 146 Pfam PF09278 MerR, DNA binding 47 109 9.0E-18 T 11-10-2018 IPR015358 Transcription regulator MerR, DNA binding VSVS12_02986 069a105c15473c4a5817609e7a5d9071 146 Pfam PF00376 MerR family regulatory protein 4 40 5.4E-16 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VSVS12_02986 069a105c15473c4a5817609e7a5d9071 146 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 2.9E-11 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VSVS12_02986 069a105c15473c4a5817609e7a5d9071 146 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 2.9E-11 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VSVS12_02986 069a105c15473c4a5817609e7a5d9071 146 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 2.9E-11 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VSVS12_02986 069a105c15473c4a5817609e7a5d9071 146 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 131 6.9E-65 T 11-10-2018 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 VSVS12_01570 a269f6da4be93bd714885fac43a384da 346 Gene3D G3DSA:1.25.40.10 18 177 1.2E-29 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_01570 a269f6da4be93bd714885fac43a384da 346 SUPERFAMILY SSF46565 292 342 6.93E-12 T 11-10-2018 IPR036869 Chaperone J-domain superfamily VSVS12_01570 a269f6da4be93bd714885fac43a384da 346 SUPERFAMILY SSF81901 24 158 2.09E-20 T 11-10-2018 VSVS12_01570 a269f6da4be93bd714885fac43a384da 346 Gene3D G3DSA:1.10.287.110 285 346 4.4E-12 T 11-10-2018 IPR036869 Chaperone J-domain superfamily VSVS12_01570 a269f6da4be93bd714885fac43a384da 346 SMART SM00671 109 144 17.0 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_01570 a269f6da4be93bd714885fac43a384da 346 SMART SM00671 73 108 5.2 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_01570 a269f6da4be93bd714885fac43a384da 346 SMART SM00671 37 72 3.7E-7 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_01570 a269f6da4be93bd714885fac43a384da 346 Pfam PF08238 Sel1 repeat 111 142 0.13 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_01570 a269f6da4be93bd714885fac43a384da 346 Pfam PF08238 Sel1 repeat 72 107 0.0062 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_01570 a269f6da4be93bd714885fac43a384da 346 Pfam PF08238 Sel1 repeat 37 70 6.5E-6 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_01788 76b41877402d8daeee9a158597e32c5a 79 SMART SM00360 2 75 4.7E-24 T 11-10-2018 IPR000504 RNA recognition motif domain GO:0003676 VSVS12_01788 76b41877402d8daeee9a158597e32c5a 79 Gene3D G3DSA:3.30.70.330 1 79 7.4E-26 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily VSVS12_01788 76b41877402d8daeee9a158597e32c5a 79 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 3 73 1.8E-21 T 11-10-2018 IPR000504 RNA recognition motif domain GO:0003676 VSVS12_01788 76b41877402d8daeee9a158597e32c5a 79 SUPERFAMILY SSF54928 2 78 1.88E-25 T 11-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 VSVS12_03343 7bcdcbb607d7fcdab75b312f7719a75f 278 PRINTS PR01543 Arylamine N-acetyltransferase signature 105 130 4.1E-8 T 11-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 VSVS12_03343 7bcdcbb607d7fcdab75b312f7719a75f 278 PRINTS PR01543 Arylamine N-acetyltransferase signature 50 73 4.1E-8 T 11-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 VSVS12_03343 7bcdcbb607d7fcdab75b312f7719a75f 278 PRINTS PR01543 Arylamine N-acetyltransferase signature 26 49 4.1E-8 T 11-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 VSVS12_03343 7bcdcbb607d7fcdab75b312f7719a75f 278 SUPERFAMILY SSF54001 26 270 1.65E-59 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily VSVS12_03343 7bcdcbb607d7fcdab75b312f7719a75f 278 Gene3D G3DSA:2.40.128.150 90 184 2.5E-61 T 11-10-2018 VSVS12_03343 7bcdcbb607d7fcdab75b312f7719a75f 278 Gene3D G3DSA:3.30.2140.10 24 256 2.5E-61 T 11-10-2018 VSVS12_03343 7bcdcbb607d7fcdab75b312f7719a75f 278 Pfam PF00797 N-acetyltransferase 28 259 2.1E-53 T 11-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 VSVS12_01800 d27c40cc50c766fac2817d828f56afd5 206 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 127 204 4.9E-20 T 11-10-2018 IPR006260 TonB/TolA, C-terminal VSVS12_01800 d27c40cc50c766fac2817d828f56afd5 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 121 142 4.9E-14 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VSVS12_01800 d27c40cc50c766fac2817d828f56afd5 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 142 160 4.9E-14 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VSVS12_01800 d27c40cc50c766fac2817d828f56afd5 206 PRINTS PR01374 Gram-negative bacterial tonB protein signature 161 178 4.9E-14 T 11-10-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 VSVS12_01800 d27c40cc50c766fac2817d828f56afd5 206 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 126 204 1.7E-21 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 VSVS12_01800 d27c40cc50c766fac2817d828f56afd5 206 Gene3D G3DSA:3.30.1150.10 103 206 8.7E-30 T 11-10-2018 VSVS12_01800 d27c40cc50c766fac2817d828f56afd5 206 SUPERFAMILY SSF74653 118 195 7.59E-25 T 11-10-2018 VSVS12_03522 c60f6c6bebfd87de0482d7c5da9870a6 897 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 498 610 3.4E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_03522 c60f6c6bebfd87de0482d7c5da9870a6 897 SMART SM00387 497 612 3.2E-36 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_03522 c60f6c6bebfd87de0482d7c5da9870a6 897 SMART SM00448 769 886 1.5E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_03522 c60f6c6bebfd87de0482d7c5da9870a6 897 Pfam PF00512 His Kinase A (phospho-acceptor) domain 386 450 6.7E-20 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_03522 c60f6c6bebfd87de0482d7c5da9870a6 897 SMART SM00388 385 450 8.5E-23 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_03522 c60f6c6bebfd87de0482d7c5da9870a6 897 SUPERFAMILY SSF55874 439 610 4.98E-45 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_03522 c60f6c6bebfd87de0482d7c5da9870a6 897 Gene3D G3DSA:1.10.287.130 351 448 4.7E-29 T 11-10-2018 VSVS12_03522 c60f6c6bebfd87de0482d7c5da9870a6 897 PRINTS PR00344 Bacterial sensor protein C-terminal signature 596 609 5.4E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_03522 c60f6c6bebfd87de0482d7c5da9870a6 897 PRINTS PR00344 Bacterial sensor protein C-terminal signature 572 590 5.4E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_03522 c60f6c6bebfd87de0482d7c5da9870a6 897 PRINTS PR00344 Bacterial sensor protein C-terminal signature 555 565 5.4E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_03522 c60f6c6bebfd87de0482d7c5da9870a6 897 PRINTS PR00344 Bacterial sensor protein C-terminal signature 537 551 5.4E-16 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_03522 c60f6c6bebfd87de0482d7c5da9870a6 897 Gene3D G3DSA:3.40.50.2300 750 891 8.7E-39 T 11-10-2018 VSVS12_03522 c60f6c6bebfd87de0482d7c5da9870a6 897 Gene3D G3DSA:3.30.565.10 449 613 1.2E-47 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_03522 c60f6c6bebfd87de0482d7c5da9870a6 897 SUPERFAMILY SSF47384 370 451 3.14E-21 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VSVS12_03522 c60f6c6bebfd87de0482d7c5da9870a6 897 Pfam PF00072 Response regulator receiver domain 771 885 2.0E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_03522 c60f6c6bebfd87de0482d7c5da9870a6 897 SUPERFAMILY SSF52172 767 888 5.98E-35 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_03639 280d1a88431b7066f93f94424ff9e144 284 Pfam PF00230 Major intrinsic protein 6 252 8.0E-63 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VSVS12_03639 280d1a88431b7066f93f94424ff9e144 284 Gene3D G3DSA:1.20.1080.10 4 260 3.9E-96 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VSVS12_03639 280d1a88431b7066f93f94424ff9e144 284 PRINTS PR00783 Major intrinsic protein family signature 11 30 1.4E-49 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VSVS12_03639 280d1a88431b7066f93f94424ff9e144 284 PRINTS PR00783 Major intrinsic protein family signature 186 208 1.4E-49 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VSVS12_03639 280d1a88431b7066f93f94424ff9e144 284 PRINTS PR00783 Major intrinsic protein family signature 235 255 1.4E-49 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VSVS12_03639 280d1a88431b7066f93f94424ff9e144 284 PRINTS PR00783 Major intrinsic protein family signature 50 74 1.4E-49 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VSVS12_03639 280d1a88431b7066f93f94424ff9e144 284 PRINTS PR00783 Major intrinsic protein family signature 87 106 1.4E-49 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VSVS12_03639 280d1a88431b7066f93f94424ff9e144 284 PRINTS PR00783 Major intrinsic protein family signature 153 171 1.4E-49 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VSVS12_03639 280d1a88431b7066f93f94424ff9e144 284 ProSitePatterns PS00221 MIP family signature. 68 76 - T 11-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 VSVS12_03639 280d1a88431b7066f93f94424ff9e144 284 TIGRFAM TIGR00861 MIP: MIP family channel proteins 15 252 1.5E-67 T 11-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 VSVS12_03639 280d1a88431b7066f93f94424ff9e144 284 SUPERFAMILY SSF81338 9 256 4.84E-72 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VSVS12_01660 76ff749298c94208cc045c47c0d41afe 877 Pfam PF02470 MlaD protein 47 137 3.3E-13 T 11-10-2018 IPR003399 Mce/MlaD VSVS12_01660 76ff749298c94208cc045c47c0d41afe 877 Pfam PF02470 MlaD protein 285 374 4.9E-9 T 11-10-2018 IPR003399 Mce/MlaD VSVS12_01660 76ff749298c94208cc045c47c0d41afe 877 Pfam PF02470 MlaD protein 164 223 1.4E-6 T 11-10-2018 IPR003399 Mce/MlaD VSVS12_01660 76ff749298c94208cc045c47c0d41afe 877 Pfam PF02470 MlaD protein 746 815 2.5E-7 T 11-10-2018 IPR003399 Mce/MlaD VSVS12_01660 76ff749298c94208cc045c47c0d41afe 877 Pfam PF02470 MlaD protein 522 574 1.4E-5 T 11-10-2018 IPR003399 Mce/MlaD VSVS12_01660 76ff749298c94208cc045c47c0d41afe 877 Pfam PF02470 MlaD protein 398 461 5.1E-12 T 11-10-2018 IPR003399 Mce/MlaD VSVS12_01660 76ff749298c94208cc045c47c0d41afe 877 Pfam PF02470 MlaD protein 637 714 2.0E-6 T 11-10-2018 IPR003399 Mce/MlaD VSVS12_02587 80160e166c8c3445e079368d3f80418e 354 SUPERFAMILY SSF50156 240 347 5.26E-23 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 VSVS12_02587 80160e166c8c3445e079368d3f80418e 354 SMART SM00228 257 339 1.3E-9 T 11-10-2018 IPR001478 PDZ domain GO:0005515 VSVS12_02587 80160e166c8c3445e079368d3f80418e 354 Pfam PF13365 Trypsin-like peptidase domain 82 216 5.7E-33 T 11-10-2018 VSVS12_02587 80160e166c8c3445e079368d3f80418e 354 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 4 352 1.2E-166 T 11-10-2018 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 VSVS12_02587 80160e166c8c3445e079368d3f80418e 354 Gene3D G3DSA:2.30.42.10 257 353 2.6E-25 T 11-10-2018 VSVS12_02587 80160e166c8c3445e079368d3f80418e 354 Gene3D G3DSA:2.40.10.10 144 256 1.4E-35 T 11-10-2018 VSVS12_02587 80160e166c8c3445e079368d3f80418e 354 PRINTS PR00834 HtrA/DegQ protease family signature 112 132 1.9E-46 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VSVS12_02587 80160e166c8c3445e079368d3f80418e 354 PRINTS PR00834 HtrA/DegQ protease family signature 297 309 1.9E-46 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VSVS12_02587 80160e166c8c3445e079368d3f80418e 354 PRINTS PR00834 HtrA/DegQ protease family signature 209 226 1.9E-46 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VSVS12_02587 80160e166c8c3445e079368d3f80418e 354 PRINTS PR00834 HtrA/DegQ protease family signature 91 103 1.9E-46 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VSVS12_02587 80160e166c8c3445e079368d3f80418e 354 PRINTS PR00834 HtrA/DegQ protease family signature 152 176 1.9E-46 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VSVS12_02587 80160e166c8c3445e079368d3f80418e 354 PRINTS PR00834 HtrA/DegQ protease family signature 187 204 1.9E-46 T 11-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 VSVS12_02587 80160e166c8c3445e079368d3f80418e 354 SUPERFAMILY SSF50494 43 266 6.92E-61 T 11-10-2018 IPR009003 Peptidase S1, PA clan VSVS12_02587 80160e166c8c3445e079368d3f80418e 354 Pfam PF13180 PDZ domain 258 347 6.6E-18 T 11-10-2018 IPR001478 PDZ domain GO:0005515 VSVS12_02587 80160e166c8c3445e079368d3f80418e 354 Gene3D G3DSA:2.40.10.10 32 142 6.4E-32 T 11-10-2018 VSVS12_02676 a505c4d0d727fe8f2b7b9f854d963d0e 200 Gene3D G3DSA:3.20.19.10 1 180 3.3E-77 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 VSVS12_02676 a505c4d0d727fe8f2b7b9f854d963d0e 200 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 188 3.2E-98 T 11-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 VSVS12_02676 a505c4d0d727fe8f2b7b9f854d963d0e 200 SUPERFAMILY SSF52016 1 195 2.75E-59 T 11-10-2018 VSVS12_02676 a505c4d0d727fe8f2b7b9f854d963d0e 200 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 199 43.586 T 11-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 VSVS12_02676 a505c4d0d727fe8f2b7b9f854d963d0e 200 Pfam PF00694 Aconitase C-terminal domain 1 125 2.9E-39 T 11-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 VSVS12_03029 15508aadedae6296d9a4a7a70a33ac59 273 Gene3D G3DSA:1.10.10.60 165 220 9.7E-10 T 11-10-2018 VSVS12_03029 15508aadedae6296d9a4a7a70a33ac59 273 Pfam PF12833 Helix-turn-helix domain 192 270 1.7E-18 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VSVS12_03029 15508aadedae6296d9a4a7a70a33ac59 273 SMART SM00342 186 269 2.8E-26 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VSVS12_03029 15508aadedae6296d9a4a7a70a33ac59 273 Gene3D G3DSA:1.10.10.60 221 272 6.4E-15 T 11-10-2018 VSVS12_03029 15508aadedae6296d9a4a7a70a33ac59 273 SUPERFAMILY SSF46689 223 271 1.34E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_03029 15508aadedae6296d9a4a7a70a33ac59 273 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 223 265 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VSVS12_03029 15508aadedae6296d9a4a7a70a33ac59 273 SUPERFAMILY SSF46689 173 219 1.93E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_02905 0e9b12ad2cf67139b1465ed150aaf953 86 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 6.6E-30 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 VSVS12_02905 0e9b12ad2cf67139b1465ed150aaf953 86 SUPERFAMILY SSF50182 7 69 1.16E-24 T 11-10-2018 IPR010920 LSM domain superfamily VSVS12_02905 0e9b12ad2cf67139b1465ed150aaf953 86 Pfam PF17209 Hfq protein 7 69 1.7E-31 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 VSVS12_02905 0e9b12ad2cf67139b1465ed150aaf953 86 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.727 T 11-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 VSVS12_02905 0e9b12ad2cf67139b1465ed150aaf953 86 Gene3D G3DSA:2.30.30.100 1 72 4.5E-35 T 11-10-2018 VSVS12_00456 1c5191e68c79ffb06871252c87d33a70 70 SUPERFAMILY SSF118001 1 70 3.66E-27 T 11-10-2018 IPR036685 YehU-like superfamily VSVS12_00456 1c5191e68c79ffb06871252c87d33a70 70 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 70 24.118 T 11-10-2018 IPR010648 Uncharacterised protein family UPF0270 VSVS12_00456 1c5191e68c79ffb06871252c87d33a70 70 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 68 5.6E-32 T 11-10-2018 IPR010648 Uncharacterised protein family UPF0270 VSVS12_00456 1c5191e68c79ffb06871252c87d33a70 70 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 64 4.0E-22 T 11-10-2018 IPR010648 Uncharacterised protein family UPF0270 VSVS12_00456 1c5191e68c79ffb06871252c87d33a70 70 Gene3D G3DSA:1.10.10.610 1 70 4.2E-29 T 11-10-2018 IPR036685 YehU-like superfamily VSVS12_00456 1c5191e68c79ffb06871252c87d33a70 70 PIRSF PIRSF006169 1 70 7.9E-34 T 11-10-2018 IPR010648 Uncharacterised protein family UPF0270 VSVS12_04145 35738a78276afb7f53628bfe51cf57e6 403 Pfam PF01266 FAD dependent oxidoreductase 3 393 4.4E-63 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VSVS12_04145 35738a78276afb7f53628bfe51cf57e6 403 SUPERFAMILY SSF51905 1 303 6.47E-45 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_04145 35738a78276afb7f53628bfe51cf57e6 403 Gene3D G3DSA:3.50.50.60 3 390 1.6E-81 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_04145 35738a78276afb7f53628bfe51cf57e6 403 Gene3D G3DSA:3.30.9.10 86 355 1.6E-81 T 11-10-2018 VSVS12_00431 ef4035940aaf4ac1c83bef7378246e5d 242 PRINTS PR00160 Glutaredoxin signature 173 191 7.8E-14 T 11-10-2018 IPR014025 Glutaredoxin subgroup VSVS12_00431 ef4035940aaf4ac1c83bef7378246e5d 242 PRINTS PR00160 Glutaredoxin signature 228 241 7.8E-14 T 11-10-2018 IPR014025 Glutaredoxin subgroup VSVS12_00431 ef4035940aaf4ac1c83bef7378246e5d 242 PRINTS PR00160 Glutaredoxin signature 214 227 7.8E-14 T 11-10-2018 IPR014025 Glutaredoxin subgroup VSVS12_00431 ef4035940aaf4ac1c83bef7378246e5d 242 TIGRFAM TIGR02190 GlrX-dom: glutaredoxin-family domain 164 242 1.6E-41 T 11-10-2018 IPR011906 Glutaredoxin domain KEGG: 00480+1.11.1.15 VSVS12_00431 ef4035940aaf4ac1c83bef7378246e5d 242 ProSitePatterns PS00195 Glutaredoxin active site. 175 191 - T 11-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 VSVS12_00431 ef4035940aaf4ac1c83bef7378246e5d 242 Pfam PF00462 Glutaredoxin 173 231 2.6E-18 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VSVS12_00431 ef4035940aaf4ac1c83bef7378246e5d 242 Pfam PF08534 Redoxin 5 160 1.2E-32 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 VSVS12_00431 ef4035940aaf4ac1c83bef7378246e5d 242 SUPERFAMILY SSF52833 2 241 2.36E-48 T 11-10-2018 IPR036249 Thioredoxin-like superfamily VSVS12_00431 ef4035940aaf4ac1c83bef7378246e5d 242 Gene3D G3DSA:3.40.30.10 171 241 3.9E-23 T 11-10-2018 VSVS12_00431 ef4035940aaf4ac1c83bef7378246e5d 242 Gene3D G3DSA:3.40.30.10 4 165 7.6E-63 T 11-10-2018 VSVS12_02761 b4159a7193c9df7e44359155a89687db 855 SMART SM00533 283 590 3.9E-103 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 VSVS12_02761 b4159a7193c9df7e44359155a89687db 855 SUPERFAMILY SSF55271 4 113 1.06E-41 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 VSVS12_02761 b4159a7193c9df7e44359155a89687db 855 Gene3D G3DSA:1.10.1420.10 266 558 4.4E-102 T 11-10-2018 VSVS12_02761 b4159a7193c9df7e44359155a89687db 855 Gene3D G3DSA:3.30.420.110 127 261 1.7E-36 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 VSVS12_02761 b4159a7193c9df7e44359155a89687db 855 Pfam PF01624 MutS domain I 8 119 2.2E-41 T 11-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 VSVS12_02761 b4159a7193c9df7e44359155a89687db 855 Pfam PF05188 MutS domain II 128 253 7.7E-32 T 11-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 VSVS12_02761 b4159a7193c9df7e44359155a89687db 855 SUPERFAMILY SSF48334 267 564 1.83E-90 T 11-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily VSVS12_02761 b4159a7193c9df7e44359155a89687db 855 Gene3D G3DSA:1.10.1420.10 386 502 4.4E-102 T 11-10-2018 VSVS12_02761 b4159a7193c9df7e44359155a89687db 855 SUPERFAMILY SSF53150 114 266 2.62E-42 T 11-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 VSVS12_02761 b4159a7193c9df7e44359155a89687db 855 SMART SM00534 606 793 1.5E-120 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 VSVS12_02761 b4159a7193c9df7e44359155a89687db 855 Pfam PF05190 MutS family domain IV 427 517 6.8E-30 T 11-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 VSVS12_02761 b4159a7193c9df7e44359155a89687db 855 Gene3D G3DSA:3.40.50.300 568 853 3.9E-100 T 11-10-2018 VSVS12_02761 b4159a7193c9df7e44359155a89687db 855 Pfam PF05192 MutS domain III 269 558 8.6E-39 T 11-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 VSVS12_02761 b4159a7193c9df7e44359155a89687db 855 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 687 703 - T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 VSVS12_02761 b4159a7193c9df7e44359155a89687db 855 SUPERFAMILY SSF52540 566 797 7.02E-60 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02761 b4159a7193c9df7e44359155a89687db 855 Gene3D G3DSA:3.40.1170.10 1 121 6.1E-52 T 11-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 VSVS12_02761 b4159a7193c9df7e44359155a89687db 855 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 7 853 0.0 T 11-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 VSVS12_02761 b4159a7193c9df7e44359155a89687db 855 Pfam PF00488 MutS domain V 609 796 4.3E-87 T 11-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 VSVS12_02761 b4159a7193c9df7e44359155a89687db 855 PIRSF PIRSF037677 1 833 3.1E-154 T 11-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 VSVS12_02761 b4159a7193c9df7e44359155a89687db 855 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 7 847 25.244 T 11-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 VSVS12_01541 602408483dfb8a28d022097261b09c70 2296 SMART SM00736 1230 1318 0.015 T 11-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 VSVS12_01541 602408483dfb8a28d022097261b09c70 2296 SMART SM00736 1132 1225 0.0032 T 11-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 VSVS12_01541 602408483dfb8a28d022097261b09c70 2296 SMART SM00736 1415 1508 8.5E-5 T 11-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 VSVS12_01541 602408483dfb8a28d022097261b09c70 2296 SMART SM00736 1509 1601 0.014 T 11-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 VSVS12_01541 602408483dfb8a28d022097261b09c70 2296 SMART SM00736 1320 1413 3.7E-5 T 11-10-2018 IPR006644 Dystroglycan-type cadherin-like GO:0016020 VSVS12_01541 602408483dfb8a28d022097261b09c70 2296 Gene3D G3DSA:2.160.20.110 840 1096 5.5E-14 T 11-10-2018 VSVS12_01541 602408483dfb8a28d022097261b09c70 2296 Gene3D G3DSA:2.160.20.110 74 317 9.1E-24 T 11-10-2018 VSVS12_01541 602408483dfb8a28d022097261b09c70 2296 SUPERFAMILY SSF49313 1316 1411 3.61E-14 T 11-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 VSVS12_01541 602408483dfb8a28d022097261b09c70 2296 SUPERFAMILY SSF49313 1506 1599 1.36E-11 T 11-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 VSVS12_01541 602408483dfb8a28d022097261b09c70 2296 SUPERFAMILY SSF49313 370 451 9.03E-5 T 11-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 VSVS12_01541 602408483dfb8a28d022097261b09c70 2296 SUPERFAMILY SSF49313 1223 1316 2.43E-16 T 11-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 VSVS12_01541 602408483dfb8a28d022097261b09c70 2296 SUPERFAMILY SSF49313 1411 1506 4.47E-14 T 11-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 VSVS12_01541 602408483dfb8a28d022097261b09c70 2296 SMART SM00112 1338 1414 1.5 T 11-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 VSVS12_01541 602408483dfb8a28d022097261b09c70 2296 SMART SM00112 1528 1602 0.095 T 11-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 VSVS12_01541 602408483dfb8a28d022097261b09c70 2296 SMART SM00112 1433 1509 0.17 T 11-10-2018 IPR002126 Cadherin-like GO:0005509|GO:0007156|GO:0016020 VSVS12_01541 602408483dfb8a28d022097261b09c70 2296 SUPERFAMILY SSF49313 1145 1223 1.49E-8 T 11-10-2018 IPR015919 Cadherin-like superfamily GO:0005509|GO:0016020 VSVS12_01541 602408483dfb8a28d022097261b09c70 2296 Gene3D G3DSA:2.60.40.10 1222 1313 5.7E-13 T 11-10-2018 IPR013783 Immunoglobulin-like fold VSVS12_01541 602408483dfb8a28d022097261b09c70 2296 Gene3D G3DSA:2.60.40.10 1315 1408 1.5E-11 T 11-10-2018 IPR013783 Immunoglobulin-like fold VSVS12_01541 602408483dfb8a28d022097261b09c70 2296 Gene3D G3DSA:2.60.40.10 1505 1595 9.2E-10 T 11-10-2018 IPR013783 Immunoglobulin-like fold VSVS12_01541 602408483dfb8a28d022097261b09c70 2296 Gene3D G3DSA:2.60.40.10 1410 1503 1.2E-11 T 11-10-2018 IPR013783 Immunoglobulin-like fold VSVS12_01541 602408483dfb8a28d022097261b09c70 2296 Gene3D G3DSA:2.60.40.10 1130 1220 1.2E-5 T 11-10-2018 IPR013783 Immunoglobulin-like fold VSVS12_00361 608732866e043e9734b6285e4a12202d 96 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 11-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 VSVS12_00361 608732866e043e9734b6285e4a12202d 96 Gene3D G3DSA:2.30.33.40 1 96 6.6E-36 T 11-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 VSVS12_00361 608732866e043e9734b6285e4a12202d 96 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 24.195 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VSVS12_00361 608732866e043e9734b6285e4a12202d 96 Pfam PF00166 Chaperonin 10 Kd subunit 2 95 3.7E-31 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VSVS12_00361 608732866e043e9734b6285e4a12202d 96 SUPERFAMILY SSF50129 1 96 3.53E-31 T 11-10-2018 IPR011032 GroES-like superfamily VSVS12_00361 608732866e043e9734b6285e4a12202d 96 PRINTS PR00297 10kDa chaperonin signature 82 95 4.9E-27 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VSVS12_00361 608732866e043e9734b6285e4a12202d 96 PRINTS PR00297 10kDa chaperonin signature 3 18 4.9E-27 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VSVS12_00361 608732866e043e9734b6285e4a12202d 96 PRINTS PR00297 10kDa chaperonin signature 60 72 4.9E-27 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VSVS12_00361 608732866e043e9734b6285e4a12202d 96 PRINTS PR00297 10kDa chaperonin signature 25 46 4.9E-27 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VSVS12_00361 608732866e043e9734b6285e4a12202d 96 SMART SM00883 2 95 7.4E-50 T 11-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 VSVS12_00982 18e8c87620500e1a3feb036237832d61 624 SUPERFAMILY SSF64518 174 622 6.93E-21 T 11-10-2018 VSVS12_00982 18e8c87620500e1a3feb036237832d61 624 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 580 623 4.5E-10 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VSVS12_00982 18e8c87620500e1a3feb036237832d61 624 PRINTS PR01005 Flagellar hook-associated protein signature 50 72 2.4E-8 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VSVS12_00982 18e8c87620500e1a3feb036237832d61 624 PRINTS PR01005 Flagellar hook-associated protein signature 12 35 2.4E-8 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VSVS12_00982 18e8c87620500e1a3feb036237832d61 624 PRINTS PR01005 Flagellar hook-associated protein signature 360 382 2.4E-8 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VSVS12_00982 18e8c87620500e1a3feb036237832d61 624 PRINTS PR01005 Flagellar hook-associated protein signature 158 182 2.4E-8 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VSVS12_00982 18e8c87620500e1a3feb036237832d61 624 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 8 330 4.4E-59 T 11-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 VSVS12_00982 18e8c87620500e1a3feb036237832d61 624 Pfam PF00460 Flagella basal body rod protein 16 35 2.0E-4 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VSVS12_00735 c5bcad4fc68cced1dbeebf13dd3fe02c 131 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 98 1.0E-46 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 VSVS12_00735 c5bcad4fc68cced1dbeebf13dd3fe02c 131 Pfam PF02033 Ribosome-binding factor A 7 110 1.2E-29 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 VSVS12_00735 c5bcad4fc68cced1dbeebf13dd3fe02c 131 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 6 111 25.808 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 VSVS12_00735 c5bcad4fc68cced1dbeebf13dd3fe02c 131 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 115 1.9E-34 T 11-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 VSVS12_00735 c5bcad4fc68cced1dbeebf13dd3fe02c 131 ProSitePatterns PS01319 Ribosome-binding factor A signature. 77 98 - T 11-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 VSVS12_00735 c5bcad4fc68cced1dbeebf13dd3fe02c 131 SUPERFAMILY SSF89919 2 105 3.79E-31 T 11-10-2018 IPR023799 Ribosome-binding factor A domain superfamily VSVS12_00735 c5bcad4fc68cced1dbeebf13dd3fe02c 131 Gene3D G3DSA:3.30.300.20 1 106 2.9E-34 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta VSVS12_00728 27a42390110078b7beb4637605cd3f12 446 SUPERFAMILY SSF55957 358 444 3.92E-22 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VSVS12_00728 27a42390110078b7beb4637605cd3f12 446 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 5 137 9.3E-46 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VSVS12_00728 27a42390110078b7beb4637605cd3f12 446 Gene3D G3DSA:3.40.120.10 4 155 7.2E-49 T 11-10-2018 VSVS12_00728 27a42390110078b7beb4637605cd3f12 446 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 4 445 46.66 T 11-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VSVS12_00728 27a42390110078b7beb4637605cd3f12 446 Gene3D G3DSA:3.40.120.10 258 340 2.4E-60 T 11-10-2018 VSVS12_00728 27a42390110078b7beb4637605cd3f12 446 Gene3D G3DSA:3.30.310.50 371 446 1.6E-24 T 11-10-2018 VSVS12_00728 27a42390110078b7beb4637605cd3f12 446 SUPERFAMILY SSF53738 259 366 4.32E-29 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VSVS12_00728 27a42390110078b7beb4637605cd3f12 446 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 259 368 1.4E-30 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VSVS12_00728 27a42390110078b7beb4637605cd3f12 446 Gene3D G3DSA:3.40.120.10 176 363 2.4E-60 T 11-10-2018 VSVS12_00728 27a42390110078b7beb4637605cd3f12 446 SUPERFAMILY SSF53738 4 182 2.35E-48 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VSVS12_00728 27a42390110078b7beb4637605cd3f12 446 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 8 443 1.7E-201 T 11-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VSVS12_00728 27a42390110078b7beb4637605cd3f12 446 SUPERFAMILY SSF53738 157 257 7.46E-28 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VSVS12_00728 27a42390110078b7beb4637605cd3f12 446 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 97 106 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VSVS12_00728 27a42390110078b7beb4637605cd3f12 446 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 255 5.4E-17 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VSVS12_00728 27a42390110078b7beb4637605cd3f12 446 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 376 442 1.3E-12 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VSVS12_00728 27a42390110078b7beb4637605cd3f12 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 175 194 3.2E-12 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VSVS12_00728 27a42390110078b7beb4637605cd3f12 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 96 110 3.2E-12 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VSVS12_00728 27a42390110078b7beb4637605cd3f12 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 235 250 3.2E-12 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VSVS12_00177 020c4cb679203fb0c50aaaa80c4b70e2 175 Gene3D G3DSA:3.40.50.360 2 101 1.5E-11 T 11-10-2018 IPR029039 Flavoprotein-like superfamily VSVS12_00177 020c4cb679203fb0c50aaaa80c4b70e2 175 Pfam PF12724 Flavodoxin domain 5 153 1.4E-51 T 11-10-2018 IPR026816 Flavodoxin domain VSVS12_00177 020c4cb679203fb0c50aaaa80c4b70e2 175 SUPERFAMILY SSF52218 2 158 1.76E-28 T 11-10-2018 IPR029039 Flavoprotein-like superfamily VSVS12_01324 ac59b48e3960fefa1720fc6ecd53fb80 2297 SUPERFAMILY SSF117074 8 110 1.29E-6 T 11-10-2018 VSVS12_01324 ac59b48e3960fefa1720fc6ecd53fb80 2297 TIGRFAM TIGR03804 para_beta_helix: parallel beta-helix repeat 289 331 1.3E-4 T 11-10-2018 IPR022441 Parallel beta-helix repeat-2 Reactome: R-HSA-8951664|Reactome: R-HSA-983168 VSVS12_01324 ac59b48e3960fefa1720fc6ecd53fb80 2297 Pfam PF13229 Right handed beta helix region 265 425 9.9E-11 T 11-10-2018 IPR039448 Right handed beta helix domain VSVS12_01324 ac59b48e3960fefa1720fc6ecd53fb80 2297 SUPERFAMILY SSF51126 149 471 7.61E-12 T 11-10-2018 IPR011050 Pectin lyase fold/virulence factor VSVS12_01324 ac59b48e3960fefa1720fc6ecd53fb80 2297 Gene3D G3DSA:2.160.20.10 246 449 7.3E-10 T 11-10-2018 IPR012334 Pectin lyase fold VSVS12_00790 85f1c036cc9bd9c2197dc27c884ae8de 857 SUPERFAMILY SSF81923 4 156 8.14E-42 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VSVS12_00790 85f1c036cc9bd9c2197dc27c884ae8de 857 SUPERFAMILY SSF52540 159 545 2.66E-101 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00790 85f1c036cc9bd9c2197dc27c884ae8de 857 Gene3D G3DSA:3.40.50.300 348 544 9.7E-65 T 11-10-2018 VSVS12_00790 85f1c036cc9bd9c2197dc27c884ae8de 857 Gene3D G3DSA:3.40.50.300 550 764 2.9E-89 T 11-10-2018 VSVS12_00790 85f1c036cc9bd9c2197dc27c884ae8de 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 759 5.7E-57 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VSVS12_00790 85f1c036cc9bd9c2197dc27c884ae8de 857 SMART SM00382 198 343 7.5E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_00790 85f1c036cc9bd9c2197dc27c884ae8de 857 SMART SM00382 597 748 5.2E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_00790 85f1c036cc9bd9c2197dc27c884ae8de 857 SMART SM01086 766 855 3.7E-35 T 11-10-2018 IPR019489 Clp ATPase, C-terminal VSVS12_00790 85f1c036cc9bd9c2197dc27c884ae8de 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 854 0.0 T 11-10-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0042026 VSVS12_00790 85f1c036cc9bd9c2197dc27c884ae8de 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 4.3E-42 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 VSVS12_00790 85f1c036cc9bd9c2197dc27c884ae8de 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 4.3E-42 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 VSVS12_00790 85f1c036cc9bd9c2197dc27c884ae8de 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 4.3E-42 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 VSVS12_00790 85f1c036cc9bd9c2197dc27c884ae8de 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 4.3E-42 T 11-10-2018 IPR001270 ClpA/B family GO:0005524 VSVS12_00790 85f1c036cc9bd9c2197dc27c884ae8de 857 Gene3D G3DSA:1.10.1780.10 1 148 9.0E-30 T 11-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 VSVS12_00790 85f1c036cc9bd9c2197dc27c884ae8de 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 11-10-2018 IPR028299 ClpA/B, conserved site 2 VSVS12_00790 85f1c036cc9bd9c2197dc27c884ae8de 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 204 337 4.1E-14 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VSVS12_00790 85f1c036cc9bd9c2197dc27c884ae8de 857 Gene3D G3DSA:3.40.50.300 158 347 2.1E-75 T 11-10-2018 VSVS12_00790 85f1c036cc9bd9c2197dc27c884ae8de 857 SUPERFAMILY SSF52540 546 854 4.71E-83 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00790 85f1c036cc9bd9c2197dc27c884ae8de 857 Gene3D G3DSA:1.10.8.60 766 857 7.0E-26 T 11-10-2018 VSVS12_00790 85f1c036cc9bd9c2197dc27c884ae8de 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 11-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 VSVS12_00790 85f1c036cc9bd9c2197dc27c884ae8de 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 845 1.4E-25 T 11-10-2018 IPR019489 Clp ATPase, C-terminal VSVS12_00790 85f1c036cc9bd9c2197dc27c884ae8de 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 2.0E-10 T 11-10-2018 IPR004176 Clp, N-terminal VSVS12_00790 85f1c036cc9bd9c2197dc27c884ae8de 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 6.9E-13 T 11-10-2018 IPR004176 Clp, N-terminal VSVS12_02571 20c583c999ea3ab7888548be085912a2 626 SUPERFAMILY SSF53822 259 601 2.99E-74 T 11-10-2018 IPR028082 Periplasmic binding protein-like I VSVS12_02571 20c583c999ea3ab7888548be085912a2 626 Gene3D G3DSA:3.40.50.2300 369 597 3.9E-66 T 11-10-2018 VSVS12_02571 20c583c999ea3ab7888548be085912a2 626 Gene3D G3DSA:3.40.50.2300 263 596 3.9E-66 T 11-10-2018 VSVS12_02571 20c583c999ea3ab7888548be085912a2 626 Hamap MF_01890 Penicillin-binding protein activator LpoA [lpoA]. 1 603 27.911 T 11-10-2018 IPR007443 Penicillin-binding protein activator LpoA VSVS12_02571 20c583c999ea3ab7888548be085912a2 626 Gene3D G3DSA:1.25.40.650 151 257 1.3E-14 T 11-10-2018 VSVS12_02571 20c583c999ea3ab7888548be085912a2 626 Gene3D G3DSA:1.25.40.10 25 150 1.9E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_02571 20c583c999ea3ab7888548be085912a2 626 Pfam PF04348 LppC putative lipoprotein 42 602 1.6E-171 T 11-10-2018 IPR007443 Penicillin-binding protein activator LpoA VSVS12_03406 c12c7c3a6c4a92f18ad7f60a09a69a12 291 SUPERFAMILY SSF46689 181 231 1.88E-7 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_03406 c12c7c3a6c4a92f18ad7f60a09a69a12 291 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 234 275 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VSVS12_03406 c12c7c3a6c4a92f18ad7f60a09a69a12 291 SUPERFAMILY SSF46689 234 283 1.54E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_03406 c12c7c3a6c4a92f18ad7f60a09a69a12 291 Pfam PF02311 AraC-like ligand binding domain 30 154 2.4E-17 T 11-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VSVS12_03406 c12c7c3a6c4a92f18ad7f60a09a69a12 291 Gene3D G3DSA:1.10.10.60 183 239 1.9E-12 T 11-10-2018 VSVS12_03406 c12c7c3a6c4a92f18ad7f60a09a69a12 291 SUPERFAMILY SSF51215 28 158 2.62E-14 T 11-10-2018 IPR037923 Transcription regulator HTH-like VSVS12_03406 c12c7c3a6c4a92f18ad7f60a09a69a12 291 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 248 263 9.0E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VSVS12_03406 c12c7c3a6c4a92f18ad7f60a09a69a12 291 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 263 279 9.0E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VSVS12_03406 c12c7c3a6c4a92f18ad7f60a09a69a12 291 Pfam PF12833 Helix-turn-helix domain 203 279 1.2E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VSVS12_03406 c12c7c3a6c4a92f18ad7f60a09a69a12 291 Gene3D G3DSA:1.10.10.60 240 285 3.2E-13 T 11-10-2018 VSVS12_03406 c12c7c3a6c4a92f18ad7f60a09a69a12 291 SMART SM00342 197 279 9.1E-25 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VSVS12_01988 cdd880162aa83ad2c038c4bebaee0d4e 313 Gene3D G3DSA:3.40.190.10 169 265 9.5E-23 T 11-10-2018 VSVS12_01988 cdd880162aa83ad2c038c4bebaee0d4e 313 Gene3D G3DSA:1.10.10.10 10 99 8.6E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_01988 cdd880162aa83ad2c038c4bebaee0d4e 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 70 2.8E-20 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_01988 cdd880162aa83ad2c038c4bebaee0d4e 313 SUPERFAMILY SSF53850 94 293 1.21E-16 T 11-10-2018 VSVS12_01988 cdd880162aa83ad2c038c4bebaee0d4e 313 Pfam PF03466 LysR substrate binding domain 95 291 2.6E-14 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_01988 cdd880162aa83ad2c038c4bebaee0d4e 313 SUPERFAMILY SSF46785 9 90 2.89E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_01988 cdd880162aa83ad2c038c4bebaee0d4e 313 Gene3D G3DSA:3.40.190.10 105 281 9.5E-23 T 11-10-2018 VSVS12_01988 cdd880162aa83ad2c038c4bebaee0d4e 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 8.5E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_01988 cdd880162aa83ad2c038c4bebaee0d4e 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 8.5E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_01988 cdd880162aa83ad2c038c4bebaee0d4e 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 8.5E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_00372 cf38d3b5898d62518088b30043c9b91a 733 Pfam PF00271 Helicase conserved C-terminal domain 505 588 8.9E-8 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_00372 cf38d3b5898d62518088b30043c9b91a 733 Pfam PF00270 DEAD/DEAH box helicase 218 364 7.7E-15 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VSVS12_00372 cf38d3b5898d62518088b30043c9b91a 733 SUPERFAMILY SSF52540 461 614 7.55E-27 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00372 cf38d3b5898d62518088b30043c9b91a 733 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 732 25.245 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 VSVS12_00372 cf38d3b5898d62518088b30043c9b91a 733 SMART SM00490 492 589 2.3E-12 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_00372 cf38d3b5898d62518088b30043c9b91a 733 SUPERFAMILY SSF52540 161 379 1.8E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00372 cf38d3b5898d62518088b30043c9b91a 733 Gene3D G3DSA:1.10.8.630 4 113 1.9E-36 T 11-10-2018 VSVS12_00372 cf38d3b5898d62518088b30043c9b91a 733 Gene3D G3DSA:3.40.50.300 186 379 1.4E-77 T 11-10-2018 VSVS12_00372 cf38d3b5898d62518088b30043c9b91a 733 TIGRFAM TIGR00595 priA: primosomal protein N' 221 729 4.9E-192 T 11-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 VSVS12_00372 cf38d3b5898d62518088b30043c9b91a 733 SMART SM00487 196 395 1.3E-17 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VSVS12_03598 c82c20a00cf82e43164667e40d30f078 319 SUPERFAMILY SSF55073 165 317 1.8E-41 T 11-10-2018 IPR029787 Nucleotide cyclase VSVS12_03598 c82c20a00cf82e43164667e40d30f078 319 Gene3D G3DSA:3.30.70.270 146 317 9.4E-50 T 11-10-2018 VSVS12_03598 c82c20a00cf82e43164667e40d30f078 319 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 157 316 1.9E-41 T 11-10-2018 IPR000160 GGDEF domain VSVS12_03598 c82c20a00cf82e43164667e40d30f078 319 SMART SM00267 149 319 5.9E-53 T 11-10-2018 IPR000160 GGDEF domain VSVS12_03598 c82c20a00cf82e43164667e40d30f078 319 Pfam PF00990 Diguanylate cyclase, GGDEF domain 160 315 3.1E-40 T 11-10-2018 IPR000160 GGDEF domain VSVS12_01911 1a374a8696e2907f79acb6cc3720c53c 330 SMART SM00327 53 291 1.3E-7 T 11-10-2018 IPR002035 von Willebrand factor, type A VSVS12_01911 1a374a8696e2907f79acb6cc3720c53c 330 SUPERFAMILY SSF53300 56 281 2.92E-18 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VSVS12_01911 1a374a8696e2907f79acb6cc3720c53c 330 Pfam PF00092 von Willebrand factor type A domain 152 283 2.1E-9 T 11-10-2018 IPR002035 von Willebrand factor, type A VSVS12_02390 3c6e8063bd988a934eed1dcf302e170b 46 Pfam PF11346 Protein of unknown function (DUF3149) 4 43 4.8E-12 T 11-10-2018 IPR021494 Protein of unknown function DUF3149 VSVS12_04109 238e1e867302b15fc64a3d8aa9bbb9dd 338 SUPERFAMILY SSF103473 6 337 1.23E-27 T 11-10-2018 IPR036259 MFS transporter superfamily VSVS12_04109 238e1e867302b15fc64a3d8aa9bbb9dd 338 Pfam PF13347 MFS/sugar transport protein 6 337 4.2E-67 T 11-10-2018 VSVS12_04109 238e1e867302b15fc64a3d8aa9bbb9dd 338 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 55 80 - T 11-10-2018 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 VSVS12_04109 238e1e867302b15fc64a3d8aa9bbb9dd 338 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 4 337 1.6E-122 T 11-10-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 VSVS12_04109 238e1e867302b15fc64a3d8aa9bbb9dd 338 Gene3D G3DSA:1.20.1250.20 4 338 2.1E-12 T 11-10-2018 VSVS12_02689 6be1e5e43da2f908e4f4e92385b81de6 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 78 94 1.1E-47 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VSVS12_02689 6be1e5e43da2f908e4f4e92385b81de6 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 1.1E-47 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VSVS12_02689 6be1e5e43da2f908e4f4e92385b81de6 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 113 133 1.1E-47 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VSVS12_02689 6be1e5e43da2f908e4f4e92385b81de6 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 1.1E-47 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VSVS12_02689 6be1e5e43da2f908e4f4e92385b81de6 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 7 22 1.1E-47 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VSVS12_02689 6be1e5e43da2f908e4f4e92385b81de6 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 99 112 1.1E-47 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VSVS12_02689 6be1e5e43da2f908e4f4e92385b81de6 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 142 159 1.1E-47 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VSVS12_02689 6be1e5e43da2f908e4f4e92385b81de6 440 SUPERFAMILY SSF56327 173 436 5.94E-92 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VSVS12_02689 6be1e5e43da2f908e4f4e92385b81de6 440 Gene3D G3DSA:3.40.50.720 3 170 1.8E-70 T 11-10-2018 VSVS12_02689 6be1e5e43da2f908e4f4e92385b81de6 440 Pfam PF02056 Family 4 glycosyl hydrolase 7 186 1.1E-64 T 11-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 VSVS12_02689 6be1e5e43da2f908e4f4e92385b81de6 440 SUPERFAMILY SSF51735 6 170 1.88E-57 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_02689 6be1e5e43da2f908e4f4e92385b81de6 440 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 411 5.8E-51 T 11-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 VSVS12_02689 6be1e5e43da2f908e4f4e92385b81de6 440 Gene3D G3DSA:3.90.110.10 171 439 4.0E-100 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VSVS12_00100 3f4c27d30a714f09f97b6721b9e18539 517 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 72 93 - T 11-10-2018 IPR023765 Solute-binding protein family 5, conserved site VSVS12_00100 3f4c27d30a714f09f97b6721b9e18539 517 Gene3D G3DSA:3.90.76.10 57 165 1.6E-123 T 11-10-2018 VSVS12_00100 3f4c27d30a714f09f97b6721b9e18539 517 SUPERFAMILY SSF53850 26 516 6.52E-126 T 11-10-2018 VSVS12_00100 3f4c27d30a714f09f97b6721b9e18539 517 Gene3D G3DSA:3.10.105.10 279 494 1.6E-123 T 11-10-2018 VSVS12_00100 3f4c27d30a714f09f97b6721b9e18539 517 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 67 423 2.0E-83 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain VSVS12_00100 3f4c27d30a714f09f97b6721b9e18539 517 PIRSF PIRSF002741 21 512 1.7E-90 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VSVS12_00100 3f4c27d30a714f09f97b6721b9e18539 517 Gene3D G3DSA:3.40.190.10 32 278 1.6E-123 T 11-10-2018 VSVS12_02533 950bf4fc3fa9f9f7fa94568edcd8a87c 239 Pfam PF01048 Phosphorylase superfamily 15 219 3.8E-41 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VSVS12_02533 950bf4fc3fa9f9f7fa94568edcd8a87c 239 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 1.1E-119 T 11-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VSVS12_02533 950bf4fc3fa9f9f7fa94568edcd8a87c 239 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.584 T 11-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VSVS12_02533 950bf4fc3fa9f9f7fa94568edcd8a87c 239 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 11-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 VSVS12_02533 950bf4fc3fa9f9f7fa94568edcd8a87c 239 SUPERFAMILY SSF53167 3 234 9.69E-93 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 VSVS12_02533 950bf4fc3fa9f9f7fa94568edcd8a87c 239 Gene3D G3DSA:3.40.50.1580 1 237 1.3E-76 T 11-10-2018 VSVS12_01828 b348b3370da091e02cf2a42691f87cbf 377 PIRSF PIRSF038941 1 372 9.0E-125 T 11-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 VSVS12_01828 b348b3370da091e02cf2a42691f87cbf 377 SUPERFAMILY SSF50621 212 361 2.51E-24 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VSVS12_01828 b348b3370da091e02cf2a42691f87cbf 377 TIGRFAM TIGR01047 nspC: carboxynorspermidine decarboxylase 6 370 3.0E-157 T 11-10-2018 IPR005730 Carboxynorspermidine decarboxylase GO:0016831|GO:0045312 KEGG: 00330+4.1.1.96|MetaCyc: PWY-6562 VSVS12_01828 b348b3370da091e02cf2a42691f87cbf 377 Gene3D G3DSA:3.20.20.10 15 242 1.0E-138 T 11-10-2018 IPR029066 PLP-binding barrel VSVS12_01828 b348b3370da091e02cf2a42691f87cbf 377 Gene3D G3DSA:2.40.37.10 7 372 1.0E-138 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VSVS12_01828 b348b3370da091e02cf2a42691f87cbf 377 SUPERFAMILY SSF51419 14 243 6.54E-40 T 11-10-2018 IPR029066 PLP-binding barrel VSVS12_04150 14be1136ed34db967423cdda6aca9672 322 SUPERFAMILY SSF53300 84 281 6.53E-39 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VSVS12_04150 14be1136ed34db967423cdda6aca9672 322 Pfam PF00092 von Willebrand factor type A domain 86 278 7.1E-34 T 11-10-2018 IPR002035 von Willebrand factor, type A VSVS12_04150 14be1136ed34db967423cdda6aca9672 322 SMART SM00327 84 285 8.0E-24 T 11-10-2018 IPR002035 von Willebrand factor, type A VSVS12_04150 14be1136ed34db967423cdda6aca9672 322 Gene3D G3DSA:3.40.50.410 83 285 5.6E-61 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VSVS12_02455 cccd45951157badf5a950026cf6ccc6d 366 Pfam PF03562 MltA specific insert domain 89 250 3.5E-38 T 11-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 VSVS12_02455 cccd45951157badf5a950026cf6ccc6d 366 Gene3D G3DSA:2.40.240.50 118 256 7.3E-133 T 11-10-2018 VSVS12_02455 cccd45951157badf5a950026cf6ccc6d 366 SUPERFAMILY SSF50685 26 349 3.84E-100 T 11-10-2018 IPR036908 RlpA-like domain superfamily VSVS12_02455 cccd45951157badf5a950026cf6ccc6d 366 Gene3D G3DSA:2.40.40.10 50 347 7.3E-133 T 11-10-2018 IPR036908 RlpA-like domain superfamily VSVS12_02455 cccd45951157badf5a950026cf6ccc6d 366 Pfam PF06725 3D domain 271 347 2.9E-21 T 11-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 VSVS12_02455 cccd45951157badf5a950026cf6ccc6d 366 SMART SM00925 118 251 1.4E-65 T 11-10-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 VSVS12_00429 f8099147b050af700bfbc38fc43d026c 457 Gene3D G3DSA:1.20.200.10 108 446 1.7E-148 T 11-10-2018 VSVS12_00429 f8099147b050af700bfbc38fc43d026c 457 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 9.1E-29 T 11-10-2018 IPR000362 Fumarate lyase family VSVS12_00429 f8099147b050af700bfbc38fc43d026c 457 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 9.1E-29 T 11-10-2018 IPR000362 Fumarate lyase family VSVS12_00429 f8099147b050af700bfbc38fc43d026c 457 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 9.1E-29 T 11-10-2018 IPR000362 Fumarate lyase family VSVS12_00429 f8099147b050af700bfbc38fc43d026c 457 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 9.1E-29 T 11-10-2018 IPR000362 Fumarate lyase family VSVS12_00429 f8099147b050af700bfbc38fc43d026c 457 Gene3D G3DSA:1.10.40.30 363 433 1.7E-148 T 11-10-2018 VSVS12_00429 f8099147b050af700bfbc38fc43d026c 457 Gene3D G3DSA:1.10.275.10 1 107 2.3E-36 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal VSVS12_00429 f8099147b050af700bfbc38fc43d026c 457 Pfam PF00206 Lyase 6 301 2.5E-92 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal VSVS12_00429 f8099147b050af700bfbc38fc43d026c 457 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 VSVS12_00429 f8099147b050af700bfbc38fc43d026c 457 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 2.1E-68 T 11-10-2018 VSVS12_00429 f8099147b050af700bfbc38fc43d026c 457 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 2.1E-68 T 11-10-2018 VSVS12_00429 f8099147b050af700bfbc38fc43d026c 457 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 2.1E-68 T 11-10-2018 VSVS12_00429 f8099147b050af700bfbc38fc43d026c 457 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 2.1E-68 T 11-10-2018 VSVS12_00429 f8099147b050af700bfbc38fc43d026c 457 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 2.1E-68 T 11-10-2018 VSVS12_00429 f8099147b050af700bfbc38fc43d026c 457 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 2.1E-68 T 11-10-2018 VSVS12_00429 f8099147b050af700bfbc38fc43d026c 457 SUPERFAMILY SSF48557 3 456 1.41E-142 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 VSVS12_00429 f8099147b050af700bfbc38fc43d026c 457 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 457 1.3E-203 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VSVS12_00429 f8099147b050af700bfbc38fc43d026c 457 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 3.6E-25 T 11-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VSVS12_00429 f8099147b050af700bfbc38fc43d026c 457 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 40.622 T 11-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 VSVS12_01581 d7a68d5a7b0b924504bbe62f07a0e74a 146 SMART SM00347 26 131 1.3E-5 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VSVS12_01581 d7a68d5a7b0b924504bbe62f07a0e74a 146 SUPERFAMILY SSF46785 9 145 1.72E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_01581 d7a68d5a7b0b924504bbe62f07a0e74a 146 Gene3D G3DSA:1.10.10.10 4 143 2.0E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_03830 978ab175544862f9b92b727259947cb1 155 Gene3D G3DSA:3.20.20.70 2 155 8.3E-22 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_03830 978ab175544862f9b92b727259947cb1 155 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 11-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 VSVS12_03830 978ab175544862f9b92b727259947cb1 155 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 2 153 1.3E-62 T 11-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 VSVS12_03830 978ab175544862f9b92b727259947cb1 155 SUPERFAMILY SSF102114 23 110 8.44E-6 T 11-10-2018 VSVS12_03830 978ab175544862f9b92b727259947cb1 155 Pfam PF13353 4Fe-4S single cluster domain 12 151 1.0E-51 T 11-10-2018 VSVS12_03830 978ab175544862f9b92b727259947cb1 155 PIRSF PIRSF000368 1 155 1.7E-59 T 11-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 VSVS12_02551 4af26ec64ba316f553edc7c4362854df 379 SMART SM01097 3 133 4.6E-93 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VSVS12_02551 4af26ec64ba316f553edc7c4362854df 379 Gene3D G3DSA:3.40.50.880 152 378 6.7E-76 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like VSVS12_02551 4af26ec64ba316f553edc7c4362854df 379 SUPERFAMILY SSF52021 5 142 7.72E-58 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VSVS12_02551 4af26ec64ba316f553edc7c4362854df 379 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 7.0E-53 T 11-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VSVS12_02551 4af26ec64ba316f553edc7c4362854df 379 Pfam PF00117 Glutamine amidotransferase class-I 197 372 5.5E-47 T 11-10-2018 IPR017926 Glutamine amidotransferase VSVS12_02551 4af26ec64ba316f553edc7c4362854df 379 PRINTS PR00097 Anthranilate synthase component II signature 349 362 2.5E-5 T 11-10-2018 VSVS12_02551 4af26ec64ba316f553edc7c4362854df 379 PRINTS PR00097 Anthranilate synthase component II signature 236 245 2.5E-5 T 11-10-2018 VSVS12_02551 4af26ec64ba316f553edc7c4362854df 379 PRINTS PR00097 Anthranilate synthase component II signature 264 275 2.5E-5 T 11-10-2018 VSVS12_02551 4af26ec64ba316f553edc7c4362854df 379 SUPERFAMILY SSF52317 153 377 6.73E-62 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like VSVS12_02551 4af26ec64ba316f553edc7c4362854df 379 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 48.779 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VSVS12_02551 4af26ec64ba316f553edc7c4362854df 379 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 376 5.1E-150 T 11-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VSVS12_02551 4af26ec64ba316f553edc7c4362854df 379 Gene3D G3DSA:3.50.30.20 2 151 3.7E-62 T 11-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VSVS12_02551 4af26ec64ba316f553edc7c4362854df 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 2.3E-39 T 11-10-2018 VSVS12_02551 4af26ec64ba316f553edc7c4362854df 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 2.3E-39 T 11-10-2018 VSVS12_02551 4af26ec64ba316f553edc7c4362854df 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 2.3E-39 T 11-10-2018 VSVS12_02551 4af26ec64ba316f553edc7c4362854df 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 2.3E-39 T 11-10-2018 VSVS12_02551 4af26ec64ba316f553edc7c4362854df 379 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 2.3E-39 T 11-10-2018 VSVS12_02551 4af26ec64ba316f553edc7c4362854df 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 9.9E-11 T 11-10-2018 VSVS12_02551 4af26ec64ba316f553edc7c4362854df 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 9.9E-11 T 11-10-2018 VSVS12_02551 4af26ec64ba316f553edc7c4362854df 379 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 9.9E-11 T 11-10-2018 VSVS12_00742 038a5cd3d2749965f47ad82a0d1dbeeb 582 SMART SM00267 401 577 5.6E-74 T 11-10-2018 IPR000160 GGDEF domain VSVS12_00742 038a5cd3d2749965f47ad82a0d1dbeeb 582 Gene3D G3DSA:3.30.450.20 165 268 4.5E-5 T 11-10-2018 VSVS12_00742 038a5cd3d2749965f47ad82a0d1dbeeb 582 SMART SM00091 279 346 0.004 T 11-10-2018 IPR000014 PAS domain VSVS12_00742 038a5cd3d2749965f47ad82a0d1dbeeb 582 Gene3D G3DSA:3.30.450.20 269 408 4.1E-23 T 11-10-2018 VSVS12_00742 038a5cd3d2749965f47ad82a0d1dbeeb 582 SUPERFAMILY SSF55785 266 392 2.44E-18 T 11-10-2018 IPR035965 PAS domain superfamily VSVS12_00742 038a5cd3d2749965f47ad82a0d1dbeeb 582 SUPERFAMILY SSF55073 417 577 6.08E-49 T 11-10-2018 IPR029787 Nucleotide cyclase VSVS12_00742 038a5cd3d2749965f47ad82a0d1dbeeb 582 Gene3D G3DSA:3.30.70.270 414 581 2.5E-54 T 11-10-2018 VSVS12_00742 038a5cd3d2749965f47ad82a0d1dbeeb 582 Pfam PF08448 PAS fold 285 395 3.1E-16 T 11-10-2018 IPR013656 PAS fold-4 VSVS12_00742 038a5cd3d2749965f47ad82a0d1dbeeb 582 Pfam PF00990 Diguanylate cyclase, GGDEF domain 413 573 4.6E-51 T 11-10-2018 IPR000160 GGDEF domain VSVS12_00742 038a5cd3d2749965f47ad82a0d1dbeeb 582 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 408 576 1.9E-47 T 11-10-2018 IPR000160 GGDEF domain VSVS12_00742 038a5cd3d2749965f47ad82a0d1dbeeb 582 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 276 401 2.5E-15 T 11-10-2018 IPR000014 PAS domain VSVS12_01400 e4b93c9bbf3d165bc7591520e1a82485 210 Pfam PF10816 Domain of unknown function (DUF2760) 87 209 9.7E-54 T 11-10-2018 IPR021212 Domain of unknown function DUF2760 VSVS12_02083 d9f6725ab9633909b177cc8e98c47aab 272 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 25 270 3.1E-69 T 11-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 VSVS12_02083 d9f6725ab9633909b177cc8e98c47aab 272 SUPERFAMILY SSF53335 23 202 8.21E-46 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_02083 d9f6725ab9633909b177cc8e98c47aab 272 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 17 272 33.009 T 11-10-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00780+2.1.1.197|MetaCyc: PWY-6519 VSVS12_02083 d9f6725ab9633909b177cc8e98c47aab 272 Gene3D G3DSA:3.40.50.150 23 202 3.1E-42 T 11-10-2018 VSVS12_02083 d9f6725ab9633909b177cc8e98c47aab 272 Pfam PF08241 Methyltransferase domain 61 154 1.9E-30 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 VSVS12_04292 fe19a0a58a12e3231aaf69bce03dbecb 64 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 63 3.2E-26 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VSVS12_04292 fe19a0a58a12e3231aaf69bce03dbecb 64 Gene3D G3DSA:2.40.50.530 1 64 1.7E-18 T 11-10-2018 VSVS12_04292 fe19a0a58a12e3231aaf69bce03dbecb 64 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 63 17.71 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VSVS12_04292 fe19a0a58a12e3231aaf69bce03dbecb 64 SUPERFAMILY SSF143034 2 63 2.35E-20 T 11-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_04292 fe19a0a58a12e3231aaf69bce03dbecb 64 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 30 - T 11-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_04292 fe19a0a58a12e3231aaf69bce03dbecb 64 Pfam PF01632 Ribosomal protein L35 2 61 2.8E-21 T 11-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_04292 fe19a0a58a12e3231aaf69bce03dbecb 64 PRINTS PR00064 Ribosomal protein L35 signature 3 20 5.7E-19 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VSVS12_04292 fe19a0a58a12e3231aaf69bce03dbecb 64 PRINTS PR00064 Ribosomal protein L35 signature 20 34 5.7E-19 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VSVS12_04292 fe19a0a58a12e3231aaf69bce03dbecb 64 PRINTS PR00064 Ribosomal protein L35 signature 35 53 5.7E-19 T 11-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 VSVS12_02315 fe97e70435b562ae92d8f6cf06d7c733 377 SUPERFAMILY SSF64518 1 376 4.97E-93 T 11-10-2018 VSVS12_02315 fe97e70435b562ae92d8f6cf06d7c733 377 Pfam PF07196 Flagellin hook IN motif 197 245 8.6E-10 T 11-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VSVS12_02315 fe97e70435b562ae92d8f6cf06d7c733 377 Gene3D G3DSA:1.20.1330.10 44 327 6.2E-77 T 11-10-2018 VSVS12_02315 fe97e70435b562ae92d8f6cf06d7c733 377 Gene3D G3DSA:1.10.8.410 328 377 1.1E-18 T 11-10-2018 VSVS12_02315 fe97e70435b562ae92d8f6cf06d7c733 377 PRINTS PR00207 Flagellin signature 37 54 2.6E-26 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VSVS12_02315 fe97e70435b562ae92d8f6cf06d7c733 377 PRINTS PR00207 Flagellin signature 76 95 2.6E-26 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VSVS12_02315 fe97e70435b562ae92d8f6cf06d7c733 377 PRINTS PR00207 Flagellin signature 111 134 2.6E-26 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VSVS12_02315 fe97e70435b562ae92d8f6cf06d7c733 377 Gene3D G3DSA:3.30.70.2120 172 275 6.2E-77 T 11-10-2018 VSVS12_02315 fe97e70435b562ae92d8f6cf06d7c733 377 Pfam PF00700 Bacterial flagellin C-terminal helical region 292 376 1.4E-22 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VSVS12_02315 fe97e70435b562ae92d8f6cf06d7c733 377 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 141 4.7E-43 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VSVS12_00824 ea72c5db224517faeec32597c706cbc8 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 2.5E-10 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VSVS12_00824 ea72c5db224517faeec32597c706cbc8 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 61 73 2.5E-10 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VSVS12_00824 ea72c5db224517faeec32597c706cbc8 181 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 35 50 2.5E-10 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VSVS12_00824 ea72c5db224517faeec32597c706cbc8 181 Gene3D G3DSA:2.40.100.10 18 181 7.8E-59 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily VSVS12_00824 ea72c5db224517faeec32597c706cbc8 181 SUPERFAMILY SSF50891 19 180 2.05E-53 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily VSVS12_00824 ea72c5db224517faeec32597c706cbc8 181 PIRSF PIRSF001467 7 180 1.2E-24 T 11-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 VSVS12_00824 ea72c5db224517faeec32597c706cbc8 181 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 22 179 1.6E-44 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VSVS12_00824 ea72c5db224517faeec32597c706cbc8 181 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 56 73 - T 11-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 VSVS12_00043 6601d82fb1a2a156cd39575a4daf32e5 244 Gene3D G3DSA:3.40.50.10090 32 161 9.0E-69 T 11-10-2018 VSVS12_00043 6601d82fb1a2a156cd39575a4daf32e5 244 Pfam PF02602 Uroporphyrinogen-III synthase HemD 15 236 5.6E-34 T 11-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VSVS12_00043 6601d82fb1a2a156cd39575a4daf32e5 244 Gene3D G3DSA:3.40.50.10090 4 240 9.0E-69 T 11-10-2018 VSVS12_00043 6601d82fb1a2a156cd39575a4daf32e5 244 SUPERFAMILY SSF69618 1 240 4.05E-51 T 11-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 VSVS12_01265 3c8f7e8e8e04aa306c13b591976f3638 353 Gene3D G3DSA:3.90.226.10 109 305 1.8E-44 T 11-10-2018 VSVS12_01265 3c8f7e8e8e04aa306c13b591976f3638 353 Gene3D G3DSA:3.40.1750.20 206 270 1.8E-44 T 11-10-2018 VSVS12_01265 3c8f7e8e8e04aa306c13b591976f3638 353 SUPERFAMILY SSF52096 104 303 5.14E-28 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VSVS12_01265 3c8f7e8e8e04aa306c13b591976f3638 353 Pfam PF08496 Peptidase family S49 N-terminal 2 162 4.4E-56 T 11-10-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 VSVS12_01265 3c8f7e8e8e04aa306c13b591976f3638 353 Pfam PF01343 Peptidase family S49 165 314 2.2E-45 T 11-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 VSVS12_02428 91a43071a1dc1fbecb23df976091abd1 293 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 56 258 2.3E-9 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase VSVS12_02428 91a43071a1dc1fbecb23df976091abd1 293 SUPERFAMILY SSF56219 53 289 5.37E-31 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VSVS12_02428 91a43071a1dc1fbecb23df976091abd1 293 Gene3D G3DSA:3.60.10.10 52 292 1.9E-44 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VSVS12_01939 d97eba0fed1f5bbac2153cd64480a823 428 Pfam PF00270 DEAD/DEAH box helicase 32 207 6.1E-49 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VSVS12_01939 d97eba0fed1f5bbac2153cd64480a823 428 Gene3D G3DSA:3.40.50.300 227 425 1.7E-49 T 11-10-2018 VSVS12_01939 d97eba0fed1f5bbac2153cd64480a823 428 Gene3D G3DSA:3.40.50.300 2 221 6.2E-75 T 11-10-2018 VSVS12_01939 d97eba0fed1f5bbac2153cd64480a823 428 SMART SM00490 268 349 6.5E-33 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_01939 d97eba0fed1f5bbac2153cd64480a823 428 SMART SM00487 27 233 3.6E-56 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VSVS12_01939 d97eba0fed1f5bbac2153cd64480a823 428 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 165 173 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VSVS12_01939 d97eba0fed1f5bbac2153cd64480a823 428 SUPERFAMILY SSF52540 85 371 6.69E-76 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01939 d97eba0fed1f5bbac2153cd64480a823 428 Pfam PF00271 Helicase conserved C-terminal domain 242 349 2.2E-30 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_03223 458d33a34bb269e4c66344a4af14e411 211 Gene3D G3DSA:2.40.50.230 7 97 7.5E-18 T 11-10-2018 IPR037026 Vgr protein, OB-fold domain superfamily VSVS12_03223 458d33a34bb269e4c66344a4af14e411 211 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 18 179 2.7E-13 T 11-10-2018 IPR013046 Phage baseplate assembly protein V/Gp45 VSVS12_03223 458d33a34bb269e4c66344a4af14e411 211 Pfam PF04717 Type VI secretion system, phage-baseplate injector 17 125 1.4E-15 T 11-10-2018 IPR006531 Gp5 N-terminal VSVS12_02275 0491536b31d44df468276956e0791212 264 Gene3D G3DSA:3.30.70.660 105 242 1.1E-47 T 11-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 VSVS12_02275 0491536b31d44df468276956e0791212 264 Pfam PF01416 tRNA pseudouridine synthase 144 244 8.2E-29 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VSVS12_02275 0491536b31d44df468276956e0791212 264 Pfam PF01416 tRNA pseudouridine synthase 8 102 2.2E-11 T 11-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 VSVS12_02275 0491536b31d44df468276956e0791212 264 Gene3D G3DSA:3.30.70.580 1 104 4.8E-39 T 11-10-2018 VSVS12_02275 0491536b31d44df468276956e0791212 264 PIRSF PIRSF001430 1 252 2.9E-74 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 VSVS12_02275 0491536b31d44df468276956e0791212 264 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 2 238 4.6E-73 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 VSVS12_02275 0491536b31d44df468276956e0791212 264 SUPERFAMILY SSF55120 1 254 2.73E-90 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VSVS12_02275 0491536b31d44df468276956e0791212 264 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 243 33.95 T 11-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 VSVS12_00474 186e563ca5df62b70f2deabef64c7f24 274 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 250 1.6E-56 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 VSVS12_00474 186e563ca5df62b70f2deabef64c7f24 274 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 3.3E-33 T 11-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00474 186e563ca5df62b70f2deabef64c7f24 274 Gene3D G3DSA:2.30.30.30 115 195 5.9E-33 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 VSVS12_00474 186e563ca5df62b70f2deabef64c7f24 274 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 273 1.4E-131 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 VSVS12_00474 186e563ca5df62b70f2deabef64c7f24 274 SMART SM01382 124 252 2.2E-92 T 11-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 VSVS12_00474 186e563ca5df62b70f2deabef64c7f24 274 SMART SM01383 42 118 1.7E-45 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00474 186e563ca5df62b70f2deabef64c7f24 274 PIRSF PIRSF002158 13 274 7.3E-101 T 11-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00474 186e563ca5df62b70f2deabef64c7f24 274 Gene3D G3DSA:4.10.950.10 196 274 1.1E-36 T 11-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00474 186e563ca5df62b70f2deabef64c7f24 274 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 273 47.607 T 11-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 VSVS12_00474 186e563ca5df62b70f2deabef64c7f24 274 Gene3D G3DSA:2.40.50.140 1 114 1.9E-50 T 11-10-2018 VSVS12_00474 186e563ca5df62b70f2deabef64c7f24 274 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 11-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00474 186e563ca5df62b70f2deabef64c7f24 274 SUPERFAMILY SSF50249 2 125 2.71E-49 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_00474 186e563ca5df62b70f2deabef64c7f24 274 SUPERFAMILY SSF50104 127 272 7.82E-62 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily VSVS12_03072 c9558e523b9ee61e4d65035761181f61 156 SUPERFAMILY SSF46767 74 155 1.96E-32 T 11-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 VSVS12_03072 c9558e523b9ee61e4d65035761181f61 156 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 76 155 8.1E-32 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 VSVS12_03072 c9558e523b9ee61e4d65035761181f61 156 SUPERFAMILY SSF53155 4 79 2.16E-18 T 11-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 VSVS12_03072 c9558e523b9ee61e4d65035761181f61 156 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 6 155 41.588 T 11-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 VSVS12_03072 c9558e523b9ee61e4d65035761181f61 156 Gene3D G3DSA:3.30.160.70 1 70 2.6E-17 T 11-10-2018 VSVS12_03072 c9558e523b9ee61e4d65035761181f61 156 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 125 131 - T 11-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 VSVS12_03072 c9558e523b9ee61e4d65035761181f61 156 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 75 154 5.7E-37 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 VSVS12_03072 c9558e523b9ee61e4d65035761181f61 156 Gene3D G3DSA:1.10.10.10 74 156 2.0E-36 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_03072 c9558e523b9ee61e4d65035761181f61 156 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 3 71 2.1E-9 T 11-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 VSVS12_03488 db10321f2facb7e7c4b542413c4fc5c4 92 Gene3D G3DSA:2.60.120.10 1 92 5.6E-34 T 11-10-2018 IPR014710 RmlC-like jelly roll fold VSVS12_03488 db10321f2facb7e7c4b542413c4fc5c4 92 Hamap MF_01537 Pyrimidine/purine nucleoside phosphorylase [ppnP]. 1 92 22.502 T 11-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 VSVS12_03488 db10321f2facb7e7c4b542413c4fc5c4 92 SUPERFAMILY SSF51182 1 92 4.45E-32 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily VSVS12_03488 db10321f2facb7e7c4b542413c4fc5c4 92 Pfam PF06865 Protein of unknown function (DUF1255) 2 91 5.1E-33 T 11-10-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase KEGG: 00230+2.4.2.15|KEGG: 00240+2.4.2.4+2.4.2.3+2.4.2.2|KEGG: 00983+2.4.2.4+2.4.2.3|MetaCyc: PWY-5532|MetaCyc: PWY-7181 VSVS12_04328 0cd6fa38c2134fcc72a406fd13f4ff07 396 Pfam PF01098 Cell cycle protein 44 382 1.5E-91 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VSVS12_04328 0cd6fa38c2134fcc72a406fd13f4ff07 396 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 30 385 25.763 T 11-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VSVS12_04328 0cd6fa38c2134fcc72a406fd13f4ff07 396 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 36 381 3.3E-114 T 11-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VSVS12_04341 42f46580fa2e006e61fcb87a795553d7 300 Gene3D G3DSA:1.10.287.470 51 71 4.2E-7 T 11-10-2018 VSVS12_04341 42f46580fa2e006e61fcb87a795553d7 300 Gene3D G3DSA:1.10.287.470 152 179 1.9E-8 T 11-10-2018 VSVS12_04341 42f46580fa2e006e61fcb87a795553d7 300 SUPERFAMILY SSF111369 84 141 1.24E-6 T 11-10-2018 VSVS12_04341 42f46580fa2e006e61fcb87a795553d7 300 Gene3D G3DSA:2.40.30.170 215 294 1.9E-8 T 11-10-2018 VSVS12_04341 42f46580fa2e006e61fcb87a795553d7 300 Pfam PF13437 HlyD family secretion protein 179 283 1.4E-7 T 11-10-2018 VSVS12_04341 42f46580fa2e006e61fcb87a795553d7 300 Gene3D G3DSA:2.40.50.100 180 214 1.9E-8 T 11-10-2018 VSVS12_04341 42f46580fa2e006e61fcb87a795553d7 300 SUPERFAMILY SSF111369 16 71 2.88E-5 T 11-10-2018 VSVS12_04341 42f46580fa2e006e61fcb87a795553d7 300 Gene3D G3DSA:1.10.287.470 82 145 9.4E-12 T 11-10-2018 VSVS12_04341 42f46580fa2e006e61fcb87a795553d7 300 SUPERFAMILY SSF111369 152 225 4.18E-5 T 11-10-2018 VSVS12_04341 42f46580fa2e006e61fcb87a795553d7 300 Gene3D G3DSA:2.40.50.100 16 50 4.2E-7 T 11-10-2018 VSVS12_04422 c3623b2821ab39a678c9c6f1bb6f6e04 91 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VSVS12_04422 c3623b2821ab39a678c9c6f1bb6f6e04 91 SUPERFAMILY SSF47729 1 90 5.74E-33 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VSVS12_04422 c3623b2821ab39a678c9c6f1bb6f6e04 91 Pfam PF00216 Bacterial DNA-binding protein 1 90 2.0E-34 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VSVS12_04422 c3623b2821ab39a678c9c6f1bb6f6e04 91 SMART SM00411 1 90 4.0E-44 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VSVS12_04422 c3623b2821ab39a678c9c6f1bb6f6e04 91 Gene3D G3DSA:4.10.520.10 1 90 8.9E-37 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VSVS12_04422 c3623b2821ab39a678c9c6f1bb6f6e04 91 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.0E-19 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VSVS12_04422 c3623b2821ab39a678c9c6f1bb6f6e04 91 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.0E-19 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VSVS12_04422 c3623b2821ab39a678c9c6f1bb6f6e04 91 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.0E-19 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VSVS12_01699 967a8be549d6f52eaaee8708cc8bbee1 344 Gene3D G3DSA:3.40.190.10 132 316 1.0E-107 T 11-10-2018 VSVS12_01699 967a8be549d6f52eaaee8708cc8bbee1 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 248 267 7.6E-68 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VSVS12_01699 967a8be549d6f52eaaee8708cc8bbee1 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 149 163 7.6E-68 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VSVS12_01699 967a8be549d6f52eaaee8708cc8bbee1 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 33 49 7.6E-68 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VSVS12_01699 967a8be549d6f52eaaee8708cc8bbee1 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 123 139 7.6E-68 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VSVS12_01699 967a8be549d6f52eaaee8708cc8bbee1 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 167 186 7.6E-68 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VSVS12_01699 967a8be549d6f52eaaee8708cc8bbee1 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 204 223 7.6E-68 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VSVS12_01699 967a8be549d6f52eaaee8708cc8bbee1 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 49 70 7.6E-68 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VSVS12_01699 967a8be549d6f52eaaee8708cc8bbee1 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 92 105 7.6E-68 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VSVS12_01699 967a8be549d6f52eaaee8708cc8bbee1 344 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 76 90 7.6E-68 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VSVS12_01699 967a8be549d6f52eaaee8708cc8bbee1 344 Gene3D G3DSA:3.40.190.10 32 311 1.0E-107 T 11-10-2018 VSVS12_01699 967a8be549d6f52eaaee8708cc8bbee1 344 PIRSF PIRSF019574 1 344 1.3E-109 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VSVS12_01699 967a8be549d6f52eaaee8708cc8bbee1 344 SUPERFAMILY SSF53850 28 326 5.22E-85 T 11-10-2018 VSVS12_01699 967a8be549d6f52eaaee8708cc8bbee1 344 Pfam PF13416 Bacterial extracellular solute-binding protein 43 302 2.9E-37 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein VSVS12_02907 1fb70a719953a5f1fa6b560becf08b9e 692 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 119 1.0E-11 T 11-10-2018 VSVS12_02907 1fb70a719953a5f1fa6b560becf08b9e 692 SUPERFAMILY SSF55874 1 204 7.47E-53 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_02907 1fb70a719953a5f1fa6b560becf08b9e 692 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 690 24.914 T 11-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 VSVS12_02907 1fb70a719953a5f1fa6b560becf08b9e 692 Gene3D G3DSA:2.30.42.20 498 689 7.8E-49 T 11-10-2018 VSVS12_02907 1fb70a719953a5f1fa6b560becf08b9e 692 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 212 329 3.0E-40 T 11-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 VSVS12_02907 1fb70a719953a5f1fa6b560becf08b9e 692 SMART SM01340 212 330 4.7E-59 T 11-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 VSVS12_02907 1fb70a719953a5f1fa6b560becf08b9e 692 Gene3D G3DSA:3.30.1370.100 542 644 7.8E-49 T 11-10-2018 VSVS12_02907 1fb70a719953a5f1fa6b560becf08b9e 692 Gene3D G3DSA:3.30.230.10 217 329 1.9E-40 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VSVS12_02907 1fb70a719953a5f1fa6b560becf08b9e 692 SMART SM00853 501 652 1.8E-5 T 11-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 VSVS12_02907 1fb70a719953a5f1fa6b560becf08b9e 692 Gene3D G3DSA:3.30.565.10 1 216 4.7E-69 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_02907 1fb70a719953a5f1fa6b560becf08b9e 692 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 310 1.3E-100 T 11-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 VSVS12_02907 1fb70a719953a5f1fa6b560becf08b9e 692 SUPERFAMILY SSF54211 191 330 1.18E-37 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VSVS12_02907 1fb70a719953a5f1fa6b560becf08b9e 692 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 11-10-2018 IPR014762 DNA mismatch repair, conserved site VSVS12_02907 1fb70a719953a5f1fa6b560becf08b9e 692 Pfam PF08676 MutL C terminal dimerisation domain 498 615 3.1E-24 T 11-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 VSVS12_02907 1fb70a719953a5f1fa6b560becf08b9e 692 SUPERFAMILY SSF118116 498 691 2.48E-34 T 11-10-2018 IPR037198 MutL, C-terminal domain superfamily VSVS12_01199 7615980d085a9ad9d7324e79511b7e86 389 SMART SM00028 214 247 38.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_01199 7615980d085a9ad9d7324e79511b7e86 389 SMART SM00028 180 213 0.51 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_01199 7615980d085a9ad9d7324e79511b7e86 389 SMART SM00028 69 102 81.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_01199 7615980d085a9ad9d7324e79511b7e86 389 SMART SM00028 35 68 120.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_01199 7615980d085a9ad9d7324e79511b7e86 389 SUPERFAMILY SSF48452 36 97 1.19E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_01199 7615980d085a9ad9d7324e79511b7e86 389 Pfam PF13176 Tetratricopeptide repeat 71 94 0.026 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_01199 7615980d085a9ad9d7324e79511b7e86 389 Gene3D G3DSA:1.25.40.10 21 174 4.0E-14 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_01199 7615980d085a9ad9d7324e79511b7e86 389 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 387 37.018 T 11-10-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 VSVS12_01199 7615980d085a9ad9d7324e79511b7e86 389 SUPERFAMILY SSF48452 109 276 7.21E-17 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_01199 7615980d085a9ad9d7324e79511b7e86 389 Gene3D G3DSA:1.25.40.10 175 355 1.6E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_01053 d9725b5ffd04dac37e24c5c7a04997ee 212 SMART SM00900 100 192 5.4E-34 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 VSVS12_01053 d9725b5ffd04dac37e24c5c7a04997ee 212 Hamap MF_00479 Ion-translocating oxidoreductase complex subunit G [rsxG]. 2 194 26.43 T 11-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 VSVS12_01053 d9725b5ffd04dac37e24c5c7a04997ee 212 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 193 2.8E-66 T 11-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 VSVS12_01053 d9725b5ffd04dac37e24c5c7a04997ee 212 PIRSF PIRSF006091 1 206 3.6E-78 T 11-10-2018 IPR010209 Ion-translocating oxidoreductase complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 VSVS12_01053 d9725b5ffd04dac37e24c5c7a04997ee 212 Pfam PF04205 FMN-binding domain 100 188 1.1E-19 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 VSVS12_03293 254d5ab8bf33cf8fcef293219f8a8492 284 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 20 277 1.4E-103 T 11-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VSVS12_03293 254d5ab8bf33cf8fcef293219f8a8492 284 Gene3D G3DSA:3.40.1190.20 3 283 1.3E-102 T 11-10-2018 IPR029056 Ribokinase-like VSVS12_03293 254d5ab8bf33cf8fcef293219f8a8492 284 Pfam PF08543 Phosphomethylpyrimidine kinase 27 275 4.8E-96 T 11-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 VSVS12_03293 254d5ab8bf33cf8fcef293219f8a8492 284 SUPERFAMILY SSF53613 17 279 1.56E-83 T 11-10-2018 IPR029056 Ribokinase-like VSVS12_00181 90b42dc7bc8cd7889577cba99d8e231b 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 10 389 3.8E-140 T 11-10-2018 IPR002155 Thiolase GO:0016747 VSVS12_00181 90b42dc7bc8cd7889577cba99d8e231b 391 Pfam PF00108 Thiolase, N-terminal domain 8 258 3.8E-80 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 VSVS12_00181 90b42dc7bc8cd7889577cba99d8e231b 391 ProSitePatterns PS00737 Thiolases signature 2. 337 353 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 VSVS12_00181 90b42dc7bc8cd7889577cba99d8e231b 391 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 7 391 2.1E-231 T 11-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 VSVS12_00181 90b42dc7bc8cd7889577cba99d8e231b 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 VSVS12_00181 90b42dc7bc8cd7889577cba99d8e231b 391 PIRSF PIRSF000429 2 391 4.1E-131 T 11-10-2018 IPR002155 Thiolase GO:0016747 VSVS12_00181 90b42dc7bc8cd7889577cba99d8e231b 391 SUPERFAMILY SSF53901 4 263 2.24E-80 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 VSVS12_00181 90b42dc7bc8cd7889577cba99d8e231b 391 SUPERFAMILY SSF53901 267 390 4.01E-43 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 VSVS12_00181 90b42dc7bc8cd7889577cba99d8e231b 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 91 109 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 VSVS12_00181 90b42dc7bc8cd7889577cba99d8e231b 391 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 5 391 59.9 T 11-10-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 VSVS12_00181 90b42dc7bc8cd7889577cba99d8e231b 391 Gene3D G3DSA:3.40.47.10 138 385 6.7E-148 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 VSVS12_00181 90b42dc7bc8cd7889577cba99d8e231b 391 Pfam PF02803 Thiolase, C-terminal domain 266 390 1.0E-48 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 VSVS12_00181 90b42dc7bc8cd7889577cba99d8e231b 391 Gene3D G3DSA:3.40.47.10 8 271 6.7E-148 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 VSVS12_00444 ff592a77f7fbd3fbd8f84898fcee9e2f 284 PIRSF PIRSF000398 1 273 2.2E-73 T 11-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 VSVS12_00444 ff592a77f7fbd3fbd8f84898fcee9e2f 284 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 268 2.3E-96 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VSVS12_00444 ff592a77f7fbd3fbd8f84898fcee9e2f 284 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 252 4.6E-70 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VSVS12_00444 ff592a77f7fbd3fbd8f84898fcee9e2f 284 Gene3D G3DSA:1.10.1020.10 57 156 4.2E-84 T 11-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 VSVS12_00444 ff592a77f7fbd3fbd8f84898fcee9e2f 284 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 4.2E-18 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VSVS12_00444 ff592a77f7fbd3fbd8f84898fcee9e2f 284 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 4.2E-18 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VSVS12_00444 ff592a77f7fbd3fbd8f84898fcee9e2f 284 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 4.2E-18 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VSVS12_00444 ff592a77f7fbd3fbd8f84898fcee9e2f 284 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 4.2E-18 T 11-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 VSVS12_00444 ff592a77f7fbd3fbd8f84898fcee9e2f 284 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VSVS12_00444 ff592a77f7fbd3fbd8f84898fcee9e2f 284 SUPERFAMILY SSF53335 5 268 2.82E-75 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_00444 ff592a77f7fbd3fbd8f84898fcee9e2f 284 Gene3D G3DSA:3.40.50.150 7 239 4.2E-84 T 11-10-2018 VSVS12_03038 cd5af5399ec622670eb5f67813ff63ac 705 Pfam PF00005 ABC transporter 487 635 3.0E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_03038 cd5af5399ec622670eb5f67813ff63ac 705 ProSitePatterns PS00211 ABC transporters family signature. 607 621 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_03038 cd5af5399ec622670eb5f67813ff63ac 705 Gene3D G3DSA:1.20.1560.10 142 454 1.6E-57 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VSVS12_03038 cd5af5399ec622670eb5f67813ff63ac 705 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 3 698 1.8E-294 T 11-10-2018 IPR017750 ATPase, type I secretion system VSVS12_03038 cd5af5399ec622670eb5f67813ff63ac 705 SMART SM00382 495 681 4.7E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_03038 cd5af5399ec622670eb5f67813ff63ac 705 SUPERFAMILY SSF52540 459 693 2.61E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03038 cd5af5399ec622670eb5f67813ff63ac 705 SUPERFAMILY SSF90123 138 452 1.57E-50 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VSVS12_03038 cd5af5399ec622670eb5f67813ff63ac 705 Gene3D G3DSA:3.90.70.10 1 126 3.7E-35 T 11-10-2018 VSVS12_03038 cd5af5399ec622670eb5f67813ff63ac 705 Gene3D G3DSA:3.40.50.300 465 704 6.4E-77 T 11-10-2018 VSVS12_03038 cd5af5399ec622670eb5f67813ff63ac 705 Pfam PF00664 ABC transporter transmembrane region 158 420 8.6E-24 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VSVS12_01147 0df96f6298382c7754094719bb5d373a 587 Gene3D G3DSA:3.40.930.10 459 572 1.9E-7 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VSVS12_01147 0df96f6298382c7754094719bb5d373a 587 Pfam PF05043 Mga helix-turn-helix domain 84 157 2.8E-8 T 11-10-2018 IPR007737 Mga helix-turn-helix domain VSVS12_01147 0df96f6298382c7754094719bb5d373a 587 SUPERFAMILY SSF55804 459 568 2.88E-7 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VSVS12_01147 0df96f6298382c7754094719bb5d373a 587 SUPERFAMILY SSF63520 293 388 4.71E-6 T 11-10-2018 IPR036634 PRD domain superfamily GO:0006355 VSVS12_00459 d1bfc6d8c99fc9d1584b98c84ea36051 639 Pfam PF00005 ABC transporter 17 178 5.2E-21 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_00459 d1bfc6d8c99fc9d1584b98c84ea36051 639 Gene3D G3DSA:3.40.50.300 275 541 5.4E-55 T 11-10-2018 VSVS12_00459 d1bfc6d8c99fc9d1584b98c84ea36051 639 SUPERFAMILY SSF52540 277 494 1.32E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00459 d1bfc6d8c99fc9d1584b98c84ea36051 639 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_00459 d1bfc6d8c99fc9d1584b98c84ea36051 639 Pfam PF00005 ABC transporter 328 459 6.3E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_00459 d1bfc6d8c99fc9d1584b98c84ea36051 639 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_00459 d1bfc6d8c99fc9d1584b98c84ea36051 639 Gene3D G3DSA:3.40.50.300 7 274 3.6E-57 T 11-10-2018 VSVS12_00459 d1bfc6d8c99fc9d1584b98c84ea36051 639 Pfam PF16326 ABC transporter C-terminal domain 563 628 2.8E-8 T 11-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 VSVS12_00459 d1bfc6d8c99fc9d1584b98c84ea36051 639 SUPERFAMILY SSF52540 2 255 6.64E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00459 d1bfc6d8c99fc9d1584b98c84ea36051 639 Pfam PF12848 ABC transporter 217 295 9.1E-27 T 11-10-2018 IPR032781 ABC-transporter extension domain VSVS12_00459 d1bfc6d8c99fc9d1584b98c84ea36051 639 SMART SM00382 26 223 1.5E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_00459 d1bfc6d8c99fc9d1584b98c84ea36051 639 SMART SM00382 337 503 4.0E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_00952 b3c8d78dd6cbc7ef52b479eb2b9c8bf8 290 SUPERFAMILY SSF46894 10 109 3.97E-17 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VSVS12_00952 b3c8d78dd6cbc7ef52b479eb2b9c8bf8 290 Pfam PF00486 Transcriptional regulatory protein, C terminal 33 107 2.5E-18 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VSVS12_00952 b3c8d78dd6cbc7ef52b479eb2b9c8bf8 290 SMART SM00862 27 107 2.0E-15 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VSVS12_00952 b3c8d78dd6cbc7ef52b479eb2b9c8bf8 290 Gene3D G3DSA:1.10.10.10 5 107 9.1E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_01157 7caf5b268ec55ccf7157183ade1cfecd 260 SUPERFAMILY SSF46785 10 80 8.67E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_01157 7caf5b268ec55ccf7157183ade1cfecd 260 Pfam PF01614 Bacterial transcriptional regulator 126 251 5.9E-40 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal VSVS12_01157 7caf5b268ec55ccf7157183ade1cfecd 260 SUPERFAMILY SSF55781 74 255 8.5E-51 T 11-10-2018 VSVS12_01157 7caf5b268ec55ccf7157183ade1cfecd 260 Gene3D G3DSA:1.10.10.10 4 77 1.7E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_01157 7caf5b268ec55ccf7157183ade1cfecd 260 Gene3D G3DSA:3.30.450.40 83 259 1.2E-59 T 11-10-2018 IPR029016 GAF-like domain superfamily VSVS12_01157 7caf5b268ec55ccf7157183ade1cfecd 260 SMART SM00346 10 99 1.8E-25 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 VSVS12_01157 7caf5b268ec55ccf7157183ade1cfecd 260 Pfam PF09339 IclR helix-turn-helix domain 12 61 1.7E-13 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 VSVS12_04388 024bf2d993244bd8dfcffcee5784687b 153 Pfam PF13358 DDE superfamily endonuclease 4 118 2.4E-28 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain VSVS12_04388 024bf2d993244bd8dfcffcee5784687b 153 Gene3D G3DSA:3.30.420.470 5 151 2.5E-12 T 11-10-2018 VSVS12_04388 024bf2d993244bd8dfcffcee5784687b 153 SUPERFAMILY SSF53098 30 124 2.88E-8 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_04514 024bf2d993244bd8dfcffcee5784687b 153 Pfam PF13358 DDE superfamily endonuclease 4 118 2.4E-28 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain VSVS12_04514 024bf2d993244bd8dfcffcee5784687b 153 Gene3D G3DSA:3.30.420.470 5 151 2.5E-12 T 11-10-2018 VSVS12_04514 024bf2d993244bd8dfcffcee5784687b 153 SUPERFAMILY SSF53098 30 124 2.88E-8 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_00688 15dbc6f66a98eb7815b4dc9e8e27a32d 862 SUPERFAMILY SSF74778 2 159 2.62E-67 T 11-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VSVS12_00688 15dbc6f66a98eb7815b4dc9e8e27a32d 862 ProSitePatterns PS01244 Aconitase family signature 2. 758 771 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 VSVS12_00688 15dbc6f66a98eb7815b4dc9e8e27a32d 862 Pfam PF11791 Aconitate B N-terminal domain 4 156 6.3E-66 T 11-10-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VSVS12_00688 15dbc6f66a98eb7815b4dc9e8e27a32d 862 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 850 0.0 T 11-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VSVS12_00688 15dbc6f66a98eb7815b4dc9e8e27a32d 862 ProSitePatterns PS00450 Aconitase family signature 1. 699 716 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 VSVS12_00688 15dbc6f66a98eb7815b4dc9e8e27a32d 862 Gene3D G3DSA:3.20.19.10 162 358 1.2E-75 T 11-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 VSVS12_00688 15dbc6f66a98eb7815b4dc9e8e27a32d 862 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 379 2.1E-95 T 11-10-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VSVS12_00688 15dbc6f66a98eb7815b4dc9e8e27a32d 862 Gene3D G3DSA:1.25.40.310 1 160 4.7E-71 T 11-10-2018 IPR036288 Aconitase B, HEAT-like domain superfamily GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VSVS12_00688 15dbc6f66a98eb7815b4dc9e8e27a32d 862 PIRSF PIRSF036687 1 856 0.0 T 11-10-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 VSVS12_00688 15dbc6f66a98eb7815b4dc9e8e27a32d 862 Pfam PF00330 Aconitase family (aconitate hydratase) 469 815 3.0E-43 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VSVS12_00688 15dbc6f66a98eb7815b4dc9e8e27a32d 862 Gene3D G3DSA:3.30.499.10 399 526 2.6E-148 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 VSVS12_00688 15dbc6f66a98eb7815b4dc9e8e27a32d 862 SUPERFAMILY SSF52016 162 369 1.41E-65 T 11-10-2018 VSVS12_00688 15dbc6f66a98eb7815b4dc9e8e27a32d 862 Gene3D G3DSA:3.40.1060.10 382 678 2.6E-148 T 11-10-2018 IPR015932 Aconitase, domain 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-1268020|Reactome: R-HSA-71403 VSVS12_00688 15dbc6f66a98eb7815b4dc9e8e27a32d 862 Gene3D G3DSA:3.30.499.10 680 862 1.9E-73 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 VSVS12_00688 15dbc6f66a98eb7815b4dc9e8e27a32d 862 SUPERFAMILY SSF53732 377 858 4.58E-148 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 VSVS12_00129 ad43f395a5b05027fc0318cdc69dfadf 260 Gene3D G3DSA:3.40.50.150 40 260 7.8E-74 T 11-10-2018 VSVS12_00129 ad43f395a5b05027fc0318cdc69dfadf 260 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 45 60 - T 11-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 VSVS12_00129 ad43f395a5b05027fc0318cdc69dfadf 260 SUPERFAMILY SSF53335 27 258 3.87E-51 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_00129 ad43f395a5b05027fc0318cdc69dfadf 260 Pfam PF01209 ubiE/COQ5 methyltransferase family 26 259 1.0E-101 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 VSVS12_00129 ad43f395a5b05027fc0318cdc69dfadf 260 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 167 181 - T 11-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 VSVS12_00129 ad43f395a5b05027fc0318cdc69dfadf 260 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 25 259 38.082 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 VSVS12_00129 ad43f395a5b05027fc0318cdc69dfadf 260 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 34 259 2.4E-82 T 11-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 VSVS12_00064 21c36c5596eb4270207691bc49fc02e7 419 SUPERFAMILY SSF50249 48 125 6.85E-29 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_00064 21c36c5596eb4270207691bc49fc02e7 419 SUPERFAMILY SSF68912 1 46 4.32E-12 T 11-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily VSVS12_00064 21c36c5596eb4270207691bc49fc02e7 419 SMART SM00382 170 355 6.2E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_00064 21c36c5596eb4270207691bc49fc02e7 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 2.9E-21 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VSVS12_00064 21c36c5596eb4270207691bc49fc02e7 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 4.2E-17 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 VSVS12_00064 21c36c5596eb4270207691bc49fc02e7 419 Gene3D G3DSA:3.40.50.300 130 417 2.9E-133 T 11-10-2018 VSVS12_00064 21c36c5596eb4270207691bc49fc02e7 419 SUPERFAMILY SSF52540 90 371 1.75E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00064 21c36c5596eb4270207691bc49fc02e7 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 252.156 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 VSVS12_00064 21c36c5596eb4270207691bc49fc02e7 419 SMART SM00959 5 47 4.6E-18 T 11-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 VSVS12_00064 21c36c5596eb4270207691bc49fc02e7 419 Gene3D G3DSA:2.40.50.140 48 117 1.1E-34 T 11-10-2018 VSVS12_00064 21c36c5596eb4270207691bc49fc02e7 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 9.2E-220 T 11-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 VSVS12_00064 21c36c5596eb4270207691bc49fc02e7 419 Gene3D G3DSA:1.10.720.10 1 47 3.0E-23 T 11-10-2018 VSVS12_00064 21c36c5596eb4270207691bc49fc02e7 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 5.7E-32 T 11-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 VSVS12_00064 21c36c5596eb4270207691bc49fc02e7 419 SMART SM00357 52 118 1.7E-17 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 VSVS12_02130 5c9c88ae7d4bceea00d2736e4d137889 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 59 9.3E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VSVS12_02130 5c9c88ae7d4bceea00d2736e4d137889 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 59 75 9.3E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VSVS12_02130 5c9c88ae7d4bceea00d2736e4d137889 248 Gene3D G3DSA:1.10.10.10 12 86 6.3E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_02130 5c9c88ae7d4bceea00d2736e4d137889 248 SMART SM00866 104 239 1.4E-12 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VSVS12_02130 5c9c88ae7d4bceea00d2736e4d137889 248 SMART SM00345 30 85 1.0E-7 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VSVS12_02130 5c9c88ae7d4bceea00d2736e4d137889 248 Gene3D G3DSA:3.40.1410.10 89 246 8.9E-26 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VSVS12_02130 5c9c88ae7d4bceea00d2736e4d137889 248 SUPERFAMILY SSF46785 20 86 1.64E-14 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_02130 5c9c88ae7d4bceea00d2736e4d137889 248 Pfam PF00392 Bacterial regulatory proteins, gntR family 33 85 1.0E-11 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VSVS12_02130 5c9c88ae7d4bceea00d2736e4d137889 248 Pfam PF07702 UTRA domain 107 238 1.4E-23 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VSVS12_02130 5c9c88ae7d4bceea00d2736e4d137889 248 SUPERFAMILY SSF64288 73 242 2.67E-29 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VSVS12_00590 ca3474c3a28357df41326d99d82718f2 546 Pfam PF00263 Bacterial type II and III secretion system protein 346 521 9.0E-41 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 VSVS12_00590 ca3474c3a28357df41326d99d82718f2 546 PRINTS PR00811 Bacterial general secretion pathway protein D signature 341 365 8.0E-18 T 11-10-2018 IPR001775 GspD/PilQ family VSVS12_00590 ca3474c3a28357df41326d99d82718f2 546 PRINTS PR00811 Bacterial general secretion pathway protein D signature 509 523 8.0E-18 T 11-10-2018 IPR001775 GspD/PilQ family VSVS12_00590 ca3474c3a28357df41326d99d82718f2 546 PRINTS PR00811 Bacterial general secretion pathway protein D signature 263 273 8.0E-18 T 11-10-2018 IPR001775 GspD/PilQ family VSVS12_00590 ca3474c3a28357df41326d99d82718f2 546 PRINTS PR00811 Bacterial general secretion pathway protein D signature 486 504 8.0E-18 T 11-10-2018 IPR001775 GspD/PilQ family VSVS12_00590 ca3474c3a28357df41326d99d82718f2 546 SMART SM00965 93 141 4.5E-6 T 11-10-2018 IPR011662 Secretin/TonB, short N-terminal domain GO:0019867 VSVS12_00590 ca3474c3a28357df41326d99d82718f2 546 Pfam PF07655 Secretin N-terminal domain 145 234 1.2E-24 T 11-10-2018 IPR011514 Secretin, N-terminal GO:0009297|GO:0019867 VSVS12_00590 ca3474c3a28357df41326d99d82718f2 546 Gene3D G3DSA:3.55.50.30 53 145 2.2E-11 T 11-10-2018 VSVS12_00590 ca3474c3a28357df41326d99d82718f2 546 TIGRFAM TIGR02519 pilus_MshL: pilus (MSHA type) biogenesis protein MshL 229 521 1.1E-98 T 11-10-2018 IPR013358 Pilus biogenesis, MshL VSVS12_04323 33106b9b8fda09fbd14eb2ff06700558 104 SUPERFAMILY SSF54427 4 98 2.44E-17 T 11-10-2018 IPR032710 NTF2-like domain superfamily VSVS12_04323 33106b9b8fda09fbd14eb2ff06700558 104 Pfam PF13577 SnoaL-like domain 9 96 3.7E-10 T 11-10-2018 IPR037401 SnoaL-like domain VSVS12_04323 33106b9b8fda09fbd14eb2ff06700558 104 Gene3D G3DSA:3.10.450.50 12 99 1.4E-18 T 11-10-2018 VSVS12_00134 45a6a2994b09e085c83ad828a16d5d08 173 SUPERFAMILY SSF52540 4 166 6.92E-25 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00134 45a6a2994b09e085c83ad828a16d5d08 173 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 7 164 2.0E-65 T 11-10-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 VSVS12_00134 45a6a2994b09e085c83ad828a16d5d08 173 Pfam PF01202 Shikimate kinase 13 163 3.2E-14 T 11-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 VSVS12_00134 45a6a2994b09e085c83ad828a16d5d08 173 Gene3D G3DSA:3.40.50.300 2 167 1.2E-65 T 11-10-2018 VSVS12_01162 375f9fc383a56c396b75c587bd326aa5 87 Pfam PF01081 KDPG and KHG aldolase 1 77 4.6E-28 T 11-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VSVS12_01162 375f9fc383a56c396b75c587bd326aa5 87 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 4 17 - T 11-10-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VSVS12_01162 375f9fc383a56c396b75c587bd326aa5 87 Gene3D G3DSA:3.20.20.70 1 87 2.3E-26 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_01162 375f9fc383a56c396b75c587bd326aa5 87 SUPERFAMILY SSF51569 1 85 2.56E-23 T 11-10-2018 VSVS12_02505 22793a89d1f9d1af0612b23a4d728e7a 311 Gene3D G3DSA:3.40.190.10 96 300 1.5E-46 T 11-10-2018 VSVS12_02505 22793a89d1f9d1af0612b23a4d728e7a 311 Gene3D G3DSA:1.10.10.10 6 93 8.9E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_02505 22793a89d1f9d1af0612b23a4d728e7a 311 Pfam PF03466 LysR substrate binding domain 102 289 7.4E-24 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_02505 22793a89d1f9d1af0612b23a4d728e7a 311 SUPERFAMILY SSF46785 9 87 1.22E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_02505 22793a89d1f9d1af0612b23a4d728e7a 311 Gene3D G3DSA:3.40.190.10 177 275 1.5E-46 T 11-10-2018 VSVS12_02505 22793a89d1f9d1af0612b23a4d728e7a 311 SUPERFAMILY SSF53850 96 300 2.31E-36 T 11-10-2018 VSVS12_02505 22793a89d1f9d1af0612b23a4d728e7a 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 14 72 1.0E-13 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_01553 9fc2593a4a970907d6993c600fb71981 306 Pfam PF08668 HDOD domain 39 237 9.6E-36 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD VSVS12_01553 9fc2593a4a970907d6993c600fb71981 306 Gene3D G3DSA:1.10.3210.10 20 281 4.4E-38 T 11-10-2018 VSVS12_01553 9fc2593a4a970907d6993c600fb71981 306 SUPERFAMILY SSF109604 24 274 1.73E-36 T 11-10-2018 VSVS12_02143 238ec6d5dc5cee343e904ae195be8ad2 147 Gene3D G3DSA:3.30.420.270 63 136 2.9E-18 T 11-10-2018 VSVS12_02143 238ec6d5dc5cee343e904ae195be8ad2 147 Hamap MF_02203 Tol-Pal system protein TolR [tolR]. 5 144 27.345 T 11-10-2018 IPR014168 Tol-Pal system protein TolR GO:0015031|GO:0016021 VSVS12_02143 238ec6d5dc5cee343e904ae195be8ad2 147 Pfam PF02472 Biopolymer transport protein ExbD/TolR 9 144 2.5E-24 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 VSVS12_02032 92cf57207d6197b5573ec5e11104e1b0 222 SUPERFAMILY SSF52540 3 204 1.54E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02032 92cf57207d6197b5573ec5e11104e1b0 222 SMART SM00382 28 219 1.4E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_02032 92cf57207d6197b5573ec5e11104e1b0 222 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_02032 92cf57207d6197b5573ec5e11104e1b0 222 Gene3D G3DSA:3.40.50.300 1 208 1.1E-50 T 11-10-2018 VSVS12_02032 92cf57207d6197b5573ec5e11104e1b0 222 Pfam PF00005 ABC transporter 21 163 2.2E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_00424 334ce81db9b38e48d23d6132e9b27a03 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 245 260 3.9E-67 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VSVS12_00424 334ce81db9b38e48d23d6132e9b27a03 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 3.9E-67 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VSVS12_00424 334ce81db9b38e48d23d6132e9b27a03 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 707 733 3.9E-67 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VSVS12_00424 334ce81db9b38e48d23d6132e9b27a03 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 533 553 3.9E-67 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VSVS12_00424 334ce81db9b38e48d23d6132e9b27a03 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 575 604 3.9E-67 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VSVS12_00424 334ce81db9b38e48d23d6132e9b27a03 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 3.9E-67 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VSVS12_00424 334ce81db9b38e48d23d6132e9b27a03 877 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 384 404 3.9E-67 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VSVS12_00424 334ce81db9b38e48d23d6132e9b27a03 877 Pfam PF00311 Phosphoenolpyruvate carboxylase 129 877 1.6E-287 T 11-10-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VSVS12_00424 334ce81db9b38e48d23d6132e9b27a03 877 SUPERFAMILY SSF51621 6 877 0.0 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VSVS12_00424 334ce81db9b38e48d23d6132e9b27a03 877 Gene3D G3DSA:1.20.1440.90 273 387 1.2E-28 T 11-10-2018 VSVS12_00424 334ce81db9b38e48d23d6132e9b27a03 877 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 877 17.874 T 11-10-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VSVS12_00424 334ce81db9b38e48d23d6132e9b27a03 877 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 11-10-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VSVS12_00424 334ce81db9b38e48d23d6132e9b27a03 877 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 535 547 - T 11-10-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 VSVS12_01046 60b17079224d8be14d8d9937431f13e6 441 Pfam PF13726 Na+-H+ antiporter family 2 88 5.0E-35 T 11-10-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal VSVS12_01046 60b17079224d8be14d8d9937431f13e6 441 PRINTS PR00173 Glutamate-aspartate symporter signature 20 40 2.6E-6 T 11-10-2018 VSVS12_01046 60b17079224d8be14d8d9937431f13e6 441 PRINTS PR00173 Glutamate-aspartate symporter signature 374 393 2.6E-6 T 11-10-2018 VSVS12_01046 60b17079224d8be14d8d9937431f13e6 441 Pfam PF03553 Na+/H+ antiporter family 150 435 5.6E-75 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VSVS12_02604 e2f5e6b6543ee6a01089712f594d7cae 131 Gene3D G3DSA:3.40.50.10220 35 131 1.5E-29 T 11-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VSVS12_02604 e2f5e6b6543ee6a01089712f594d7cae 131 Pfam PF03603 DNA polymerase III psi subunit 7 130 1.6E-34 T 11-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VSVS12_02604 e2f5e6b6543ee6a01089712f594d7cae 131 SUPERFAMILY SSF102220 31 131 4.18E-26 T 11-10-2018 IPR036654 DNA polymerase III, psi subunit superfamily GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VSVS12_02604 e2f5e6b6543ee6a01089712f594d7cae 131 PIRSF PIRSF029225 2 131 2.4E-36 T 11-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VSVS12_02604 e2f5e6b6543ee6a01089712f594d7cae 131 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 36 128 2.0E-5 T 11-10-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VSVS12_02295 42a9ba8e8b9592e164ca4da2cc5fe316 130 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 35 102 1.5E-21 T 11-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 VSVS12_02295 42a9ba8e8b9592e164ca4da2cc5fe316 130 Pfam PF04347 Flagellar biosynthesis protein, FliO 47 125 5.4E-19 T 11-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 VSVS12_02062 72eb48fcc4d20a2ef4644d0d8b30c463 346 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 6 343 1.2E-116 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 VSVS12_02062 72eb48fcc4d20a2ef4644d0d8b30c463 346 Gene3D G3DSA:3.90.1150.10 4 336 1.3E-120 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VSVS12_02062 72eb48fcc4d20a2ef4644d0d8b30c463 346 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 206 215 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 VSVS12_02062 72eb48fcc4d20a2ef4644d0d8b30c463 346 Gene3D G3DSA:3.40.640.10 49 253 1.3E-120 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VSVS12_02062 72eb48fcc4d20a2ef4644d0d8b30c463 346 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 4 345 52.132 T 11-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 VSVS12_02062 72eb48fcc4d20a2ef4644d0d8b30c463 346 SUPERFAMILY SSF53383 9 344 2.06E-72 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VSVS12_02062 72eb48fcc4d20a2ef4644d0d8b30c463 346 Pfam PF00155 Aminotransferase class I and II 42 338 2.2E-54 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VSVS12_01415 86d10fe8b7eb36f8911cfaaaf3c6f76a 196 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 188 1.4E-53 T 11-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VSVS12_01415 86d10fe8b7eb36f8911cfaaaf3c6f76a 196 PRINTS PR00097 Anthranilate synthase component II signature 4 18 2.0E-34 T 11-10-2018 VSVS12_01415 86d10fe8b7eb36f8911cfaaaf3c6f76a 196 PRINTS PR00097 Anthranilate synthase component II signature 79 90 2.0E-34 T 11-10-2018 VSVS12_01415 86d10fe8b7eb36f8911cfaaaf3c6f76a 196 PRINTS PR00097 Anthranilate synthase component II signature 166 179 2.0E-34 T 11-10-2018 VSVS12_01415 86d10fe8b7eb36f8911cfaaaf3c6f76a 196 PRINTS PR00097 Anthranilate synthase component II signature 124 136 2.0E-34 T 11-10-2018 VSVS12_01415 86d10fe8b7eb36f8911cfaaaf3c6f76a 196 PRINTS PR00097 Anthranilate synthase component II signature 52 61 2.0E-34 T 11-10-2018 VSVS12_01415 86d10fe8b7eb36f8911cfaaaf3c6f76a 196 PRINTS PR00097 Anthranilate synthase component II signature 104 112 2.0E-34 T 11-10-2018 VSVS12_01415 86d10fe8b7eb36f8911cfaaaf3c6f76a 196 Gene3D G3DSA:3.40.50.880 1 193 9.8E-57 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like VSVS12_01415 86d10fe8b7eb36f8911cfaaaf3c6f76a 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 1.1E-13 T 11-10-2018 VSVS12_01415 86d10fe8b7eb36f8911cfaaaf3c6f76a 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 1.1E-13 T 11-10-2018 VSVS12_01415 86d10fe8b7eb36f8911cfaaaf3c6f76a 196 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 1.1E-13 T 11-10-2018 VSVS12_01415 86d10fe8b7eb36f8911cfaaaf3c6f76a 196 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 2.3E-6 T 11-10-2018 VSVS12_01415 86d10fe8b7eb36f8911cfaaaf3c6f76a 196 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 2.3E-6 T 11-10-2018 VSVS12_01415 86d10fe8b7eb36f8911cfaaaf3c6f76a 196 SUPERFAMILY SSF52317 3 192 4.94E-46 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like VSVS12_01415 86d10fe8b7eb36f8911cfaaaf3c6f76a 196 Pfam PF00117 Glutamine amidotransferase class-I 6 186 4.1E-44 T 11-10-2018 IPR017926 Glutamine amidotransferase VSVS12_00127 901d219b566165c7c041fcd2b049e9ad 544 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 539 56.684 T 11-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 VSVS12_00127 901d219b566165c7c041fcd2b049e9ad 544 Pfam PF03109 ABC1 family 112 230 2.8E-36 T 11-10-2018 IPR004147 UbiB domain VSVS12_00127 901d219b566165c7c041fcd2b049e9ad 544 SUPERFAMILY SSF56112 94 436 1.39E-44 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily VSVS12_00127 901d219b566165c7c041fcd2b049e9ad 544 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 6 445 1.8E-176 T 11-10-2018 IPR010232 Probable protein kinase UbiB GO:0006744 VSVS12_02216 359602a109a82d6a5782e90bdc023469 150 Pfam PF03692 Putative zinc- or iron-chelating domain 23 91 1.6E-8 T 11-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein VSVS12_02216 359602a109a82d6a5782e90bdc023469 150 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 1 144 39.82 T 11-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 VSVS12_02216 359602a109a82d6a5782e90bdc023469 150 PIRSF PIRSF006173 1 144 4.9E-63 T 11-10-2018 IPR008228 Uncharacterised conserved protein UCP006173 VSVS12_01219 d4ef3ca6718f6e98448b8d05ecfdb442 667 Gene3D G3DSA:3.40.50.720 374 661 5.0E-106 T 11-10-2018 VSVS12_01219 d4ef3ca6718f6e98448b8d05ecfdb442 667 SUPERFAMILY SSF51971 332 515 2.94E-41 T 11-10-2018 VSVS12_01219 d4ef3ca6718f6e98448b8d05ecfdb442 667 Gene3D G3DSA:3.20.20.70 1 367 1.6E-120 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_01219 d4ef3ca6718f6e98448b8d05ecfdb442 667 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 375 625 6.1E-23 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VSVS12_01219 d4ef3ca6718f6e98448b8d05ecfdb442 667 SUPERFAMILY SSF51905 374 643 5.02E-23 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_01219 d4ef3ca6718f6e98448b8d05ecfdb442 667 Gene3D G3DSA:3.50.50.60 468 620 5.0E-106 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_01219 d4ef3ca6718f6e98448b8d05ecfdb442 667 PRINTS PR00419 Adrenodoxin reductase family signature 398 411 1.6E-10 T 11-10-2018 VSVS12_01219 d4ef3ca6718f6e98448b8d05ecfdb442 667 PRINTS PR00419 Adrenodoxin reductase family signature 375 397 1.6E-10 T 11-10-2018 VSVS12_01219 d4ef3ca6718f6e98448b8d05ecfdb442 667 SUPERFAMILY SSF51395 2 361 3.66E-107 T 11-10-2018 VSVS12_01219 d4ef3ca6718f6e98448b8d05ecfdb442 667 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 327 6.6E-83 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 VSVS12_04449 ada80d2ddae0008dcbcb1cd3b1a72820 249 Pfam PF08378 Nuclease-related domain 69 185 1.7E-17 T 11-10-2018 IPR011528 Nuclease-related domain, NERD VSVS12_03963 a90c15c05e3589143eff71c257bd5c6f 614 Gene3D G3DSA:2.20.110.10 466 532 4.0E-7 T 11-10-2018 VSVS12_03963 a90c15c05e3589143eff71c257bd5c6f 614 SUPERFAMILY SSF82185 198 313 3.01E-20 T 11-10-2018 VSVS12_03963 a90c15c05e3589143eff71c257bd5c6f 614 Pfam PF07661 MORN repeat variant 181 199 0.033 T 11-10-2018 IPR011652 MORN variant VSVS12_03963 a90c15c05e3589143eff71c257bd5c6f 614 Pfam PF07661 MORN repeat variant 109 128 0.5 T 11-10-2018 IPR011652 MORN variant VSVS12_03963 a90c15c05e3589143eff71c257bd5c6f 614 Pfam PF07661 MORN repeat variant 277 296 0.025 T 11-10-2018 IPR011652 MORN variant VSVS12_03963 a90c15c05e3589143eff71c257bd5c6f 614 Pfam PF07661 MORN repeat variant 204 225 7.7E-5 T 11-10-2018 IPR011652 MORN variant VSVS12_03963 a90c15c05e3589143eff71c257bd5c6f 614 SUPERFAMILY SSF82185 414 523 3.84E-14 T 11-10-2018 VSVS12_03963 a90c15c05e3589143eff71c257bd5c6f 614 Gene3D G3DSA:3.90.930.1 65 174 4.0E-10 T 11-10-2018 VSVS12_03963 a90c15c05e3589143eff71c257bd5c6f 614 Gene3D G3DSA:3.90.930.1 175 306 2.4E-20 T 11-10-2018 VSVS12_03963 a90c15c05e3589143eff71c257bd5c6f 614 SUPERFAMILY SSF82185 105 217 4.97E-21 T 11-10-2018 VSVS12_02367 3ac8c01f3b599c63883da36455da7283 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 11-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VSVS12_02367 3ac8c01f3b599c63883da36455da7283 588 SUPERFAMILY SSF56425 237 356 1.79E-41 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VSVS12_02367 3ac8c01f3b599c63883da36455da7283 588 SUPERFAMILY SSF46977 452 588 9.55E-48 T 11-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VSVS12_02367 3ac8c01f3b599c63883da36455da7283 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 7.0E-38 T 11-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VSVS12_02367 3ac8c01f3b599c63883da36455da7283 588 PIRSF PIRSF000171 1 580 6.3E-53 T 11-10-2018 VSVS12_02367 3ac8c01f3b599c63883da36455da7283 588 Pfam PF00890 FAD binding domain 9 405 1.5E-117 T 11-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 VSVS12_02367 3ac8c01f3b599c63883da36455da7283 588 Gene3D G3DSA:1.20.58.100 431 547 4.0E-40 T 11-10-2018 VSVS12_02367 3ac8c01f3b599c63883da36455da7283 588 Gene3D G3DSA:3.90.700.10 246 350 6.0E-169 T 11-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 VSVS12_02367 3ac8c01f3b599c63883da36455da7283 588 Gene3D G3DSA:3.50.50.60 9 416 6.0E-169 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_02367 3ac8c01f3b599c63883da36455da7283 588 Gene3D G3DSA:4.10.80.40 548 588 7.9E-22 T 11-10-2018 VSVS12_02367 3ac8c01f3b599c63883da36455da7283 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 4.4E-274 T 11-10-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 VSVS12_02367 3ac8c01f3b599c63883da36455da7283 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 5.2E-239 T 11-10-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VSVS12_02367 3ac8c01f3b599c63883da36455da7283 588 SUPERFAMILY SSF51905 5 444 2.03E-73 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_03782 f8878c48cc9c596ba5d5dd06aa582e4f 250 SUPERFAMILY SSF88713 5 244 9.64E-94 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VSVS12_03782 f8878c48cc9c596ba5d5dd06aa582e4f 250 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 4 249 42.324 T 11-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 VSVS12_03782 f8878c48cc9c596ba5d5dd06aa582e4f 250 Pfam PF03746 LamB/YcsF family 6 243 2.1E-97 T 11-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 VSVS12_03782 f8878c48cc9c596ba5d5dd06aa582e4f 250 Gene3D G3DSA:3.20.20.370 1 245 1.8E-101 T 11-10-2018 VSVS12_04364 8980a492dd2997d9b7fb78a95f897d64 236 Gene3D G3DSA:3.40.50.1580 1 236 8.7E-77 T 11-10-2018 VSVS12_04364 8980a492dd2997d9b7fb78a95f897d64 236 SUPERFAMILY SSF53167 3 234 4.97E-92 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 VSVS12_04364 8980a492dd2997d9b7fb78a95f897d64 236 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 51.446 T 11-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VSVS12_04364 8980a492dd2997d9b7fb78a95f897d64 236 Pfam PF01048 Phosphorylase superfamily 17 221 1.3E-34 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VSVS12_04364 8980a492dd2997d9b7fb78a95f897d64 236 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 233 1.8E-111 T 11-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 VSVS12_02284 eaec8d8fdcf94e1f4a66546a32c2baff 714 SUPERFAMILY SSF63825 63 243 4.19E-11 T 11-10-2018 VSVS12_02284 eaec8d8fdcf94e1f4a66546a32c2baff 714 TIGRFAM TIGR04456 LruC_dom: LruC domain 445 703 1.8E-78 T 11-10-2018 IPR031025 LruC domain VSVS12_02284 eaec8d8fdcf94e1f4a66546a32c2baff 714 Gene3D G3DSA:2.120.10.30 114 293 7.5E-9 T 11-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like VSVS12_02284 eaec8d8fdcf94e1f4a66546a32c2baff 714 Pfam PF16130 Domain of unknown function (DUF4842) 477 703 6.9E-52 T 11-10-2018 IPR032295 Domain of unknown function DUF4842 VSVS12_03755 fa59e73f43382fc454257b84428fcdfd 258 TIGRFAM TIGR03371 cellulose_yhjQ: cellulose synthase operon protein YhjQ 1 251 3.5E-63 T 11-10-2018 IPR017746 Cellulose synthase operon protein BcsQ VSVS12_03755 fa59e73f43382fc454257b84428fcdfd 258 Gene3D G3DSA:3.40.50.300 124 245 1.6E-7 T 11-10-2018 VSVS12_03755 fa59e73f43382fc454257b84428fcdfd 258 Pfam PF06564 Cellulose biosynthesis protein BcsQ 1 248 1.4E-42 T 11-10-2018 IPR017746 Cellulose synthase operon protein BcsQ VSVS12_03755 fa59e73f43382fc454257b84428fcdfd 258 SUPERFAMILY SSF52540 1 249 1.7E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03755 fa59e73f43382fc454257b84428fcdfd 258 Gene3D G3DSA:3.40.50.300 1 110 5.9E-10 T 11-10-2018 VSVS12_01736 d85db02bbede5c8efa33d7e49e02c60b 206 SUPERFAMILY SSF63380 1 93 1.36E-25 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VSVS12_01736 d85db02bbede5c8efa33d7e49e02c60b 206 Pfam PF00677 Lumazine binding domain 3 87 4.9E-21 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VSVS12_01736 d85db02bbede5c8efa33d7e49e02c60b 206 Pfam PF00677 Lumazine binding domain 100 184 1.0E-20 T 11-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VSVS12_01736 d85db02bbede5c8efa33d7e49e02c60b 206 Gene3D G3DSA:2.40.30.20 1 89 4.1E-30 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VSVS12_01736 d85db02bbede5c8efa33d7e49e02c60b 206 SUPERFAMILY SSF63380 93 198 9.35E-30 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VSVS12_01736 d85db02bbede5c8efa33d7e49e02c60b 206 Gene3D G3DSA:2.40.30.20 94 190 2.7E-28 T 11-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VSVS12_01736 d85db02bbede5c8efa33d7e49e02c60b 206 PIRSF PIRSF000498 1 205 1.1E-67 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VSVS12_01736 d85db02bbede5c8efa33d7e49e02c60b 206 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 201 8.2E-74 T 11-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VSVS12_01224 0e69c234ab18c26cacdcd3da49f29192 233 Gene3D G3DSA:3.30.420.40 5 201 1.0E-82 T 11-10-2018 VSVS12_01224 0e69c234ab18c26cacdcd3da49f29192 233 Gene3D G3DSA:3.30.420.40 96 190 1.0E-82 T 11-10-2018 VSVS12_01224 0e69c234ab18c26cacdcd3da49f29192 233 SUPERFAMILY SSF53067 110 219 2.2E-29 T 11-10-2018 VSVS12_01224 0e69c234ab18c26cacdcd3da49f29192 233 Pfam PF00814 Glycoprotease family 31 226 7.8E-32 T 11-10-2018 IPR000905 Gcp-like domain VSVS12_01224 0e69c234ab18c26cacdcd3da49f29192 233 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 5 221 5.9E-70 T 11-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 VSVS12_01224 0e69c234ab18c26cacdcd3da49f29192 233 SUPERFAMILY SSF53067 4 108 9.93E-31 T 11-10-2018 VSVS12_00973 dd86e9cbb68b7fcfae1d94828d8b7527 131 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 129 6.8E-29 T 11-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 VSVS12_00973 dd86e9cbb68b7fcfae1d94828d8b7527 131 PIRSF PIRSF002889 1 131 5.7E-34 T 11-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 VSVS12_03720 880ad4ab029764c8b590910bd5ba7355 296 SUPERFAMILY SSF161098 10 296 1.06E-68 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_03720 880ad4ab029764c8b590910bd5ba7355 296 Gene3D G3DSA:1.10.3720.10 1 283 3.4E-74 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_03720 880ad4ab029764c8b590910bd5ba7355 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 286 1.8E-18 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VSVS12_04294 e763252913f698372093448b2cb3ef7f 642 SMART SM00863 171 220 5.1E-19 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 VSVS12_04294 e763252913f698372093448b2cb3ef7f 642 SUPERFAMILY SSF55186 65 242 3.27E-63 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 VSVS12_04294 e763252913f698372093448b2cb3ef7f 642 Gene3D G3DSA:3.10.20.30 3 62 1.8E-22 T 11-10-2018 IPR012675 Beta-grasp domain superfamily VSVS12_04294 e763252913f698372093448b2cb3ef7f 642 Gene3D G3DSA:3.40.50.800 533 642 1.3E-31 T 11-10-2018 IPR036621 Anticodon-binding domain superfamily VSVS12_04294 e763252913f698372093448b2cb3ef7f 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 319 530 5.0E-49 T 11-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VSVS12_04294 e763252913f698372093448b2cb3ef7f 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 67 635 34.041 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VSVS12_04294 e763252913f698372093448b2cb3ef7f 642 Pfam PF02824 TGS domain 4 61 4.6E-12 T 11-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 VSVS12_04294 e763252913f698372093448b2cb3ef7f 642 Gene3D G3DSA:3.30.930.10 224 532 2.6E-128 T 11-10-2018 VSVS12_04294 e763252913f698372093448b2cb3ef7f 642 Pfam PF03129 Anticodon binding domain 542 631 2.5E-23 T 11-10-2018 IPR004154 Anticodon-binding VSVS12_04294 e763252913f698372093448b2cb3ef7f 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 73 632 8.9E-241 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VSVS12_04294 e763252913f698372093448b2cb3ef7f 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 173 220 7.7E-14 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 VSVS12_04294 e763252913f698372093448b2cb3ef7f 642 Gene3D G3DSA:3.30.54.20 131 188 1.7E-63 T 11-10-2018 VSVS12_04294 e763252913f698372093448b2cb3ef7f 642 SUPERFAMILY SSF55681 244 527 6.17E-99 T 11-10-2018 VSVS12_04294 e763252913f698372093448b2cb3ef7f 642 Gene3D G3DSA:3.30.980.10 70 223 1.7E-63 T 11-10-2018 VSVS12_04294 e763252913f698372093448b2cb3ef7f 642 SUPERFAMILY SSF52954 530 637 3.62E-32 T 11-10-2018 VSVS12_04294 e763252913f698372093448b2cb3ef7f 642 SUPERFAMILY SSF81271 3 61 1.6E-15 T 11-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 VSVS12_04294 e763252913f698372093448b2cb3ef7f 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 535 547 6.1E-54 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VSVS12_04294 e763252913f698372093448b2cb3ef7f 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 363 386 6.1E-54 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VSVS12_04294 e763252913f698372093448b2cb3ef7f 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 330 358 6.1E-54 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VSVS12_04294 e763252913f698372093448b2cb3ef7f 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 465 493 6.1E-54 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VSVS12_04294 e763252913f698372093448b2cb3ef7f 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 508 521 6.1E-54 T 11-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 VSVS12_03197 4404cb2c343e07da1c477aedcce594f9 765 ProSitePatterns PS00850 Glycine radical domain signature. 735 743 - T 11-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VSVS12_03197 4404cb2c343e07da1c477aedcce594f9 765 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 11 764 0.0 T 11-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 VSVS12_03197 4404cb2c343e07da1c477aedcce594f9 765 Pfam PF02901 Pyruvate formate lyase-like 26 614 9.5E-193 T 11-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 VSVS12_03197 4404cb2c343e07da1c477aedcce594f9 765 Gene3D G3DSA:3.20.70.20 5 765 0.0 T 11-10-2018 VSVS12_03197 4404cb2c343e07da1c477aedcce594f9 765 Pfam PF01228 Glycine radical 630 746 1.5E-40 T 11-10-2018 IPR001150 Glycine radical domain GO:0003824 VSVS12_03197 4404cb2c343e07da1c477aedcce594f9 765 PIRSF PIRSF000379 8 765 0.0 T 11-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 VSVS12_03197 4404cb2c343e07da1c477aedcce594f9 765 SUPERFAMILY SSF51998 7 763 5.8E-271 T 11-10-2018 VSVS12_03651 c63cbd57f70f16a96eb4a80c695e8210 307 Pfam PF03466 LysR substrate binding domain 94 301 3.5E-38 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_03651 c63cbd57f70f16a96eb4a80c695e8210 307 Gene3D G3DSA:1.10.10.10 9 96 4.5E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_03651 c63cbd57f70f16a96eb4a80c695e8210 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 3.4E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_03651 c63cbd57f70f16a96eb4a80c695e8210 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 3.4E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_03651 c63cbd57f70f16a96eb4a80c695e8210 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 3.4E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_03651 c63cbd57f70f16a96eb4a80c695e8210 307 Gene3D G3DSA:3.40.190.10 169 270 3.7E-56 T 11-10-2018 VSVS12_03651 c63cbd57f70f16a96eb4a80c695e8210 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 12 69 5.0E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_03651 c63cbd57f70f16a96eb4a80c695e8210 307 SUPERFAMILY SSF53850 95 304 1.14E-38 T 11-10-2018 VSVS12_03651 c63cbd57f70f16a96eb4a80c695e8210 307 SUPERFAMILY SSF46785 4 116 1.69E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_03651 c63cbd57f70f16a96eb4a80c695e8210 307 Gene3D G3DSA:3.40.190.10 97 298 3.7E-56 T 11-10-2018 VSVS12_00932 090fe06cf6f7ba5175679d55c55a2360 322 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 311 5.6E-133 T 11-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 VSVS12_00932 090fe06cf6f7ba5175679d55c55a2360 322 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 311 4.9E-140 T 11-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 VSVS12_00932 090fe06cf6f7ba5175679d55c55a2360 322 Gene3D G3DSA:3.40.50.1100 12 306 7.9E-124 T 11-10-2018 VSVS12_00932 090fe06cf6f7ba5175679d55c55a2360 322 Gene3D G3DSA:3.40.50.1100 43 145 7.9E-124 T 11-10-2018 VSVS12_00932 090fe06cf6f7ba5175679d55c55a2360 322 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 11-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 VSVS12_00932 090fe06cf6f7ba5175679d55c55a2360 322 SUPERFAMILY SSF53686 3 312 3.14E-95 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VSVS12_00932 090fe06cf6f7ba5175679d55c55a2360 322 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 299 4.5E-67 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VSVS12_02855 c1bce15a48a9a831e66345073aea2bac 175 Pfam PF04751 Protein of unknown function (DUF615) 18 168 5.9E-52 T 11-10-2018 IPR006839 Ribosome-associated, YjgA VSVS12_02855 c1bce15a48a9a831e66345073aea2bac 175 PIRSF PIRSF016183 1 175 2.0E-67 T 11-10-2018 IPR006839 Ribosome-associated, YjgA VSVS12_02855 c1bce15a48a9a831e66345073aea2bac 175 SUPERFAMILY SSF158710 28 171 1.12E-48 T 11-10-2018 IPR023153 PSPTO4464-like domain superfamily VSVS12_02855 c1bce15a48a9a831e66345073aea2bac 175 Gene3D G3DSA:1.10.60.30 104 175 4.6E-24 T 11-10-2018 VSVS12_02855 c1bce15a48a9a831e66345073aea2bac 175 Gene3D G3DSA:1.10.60.30 28 102 2.4E-23 T 11-10-2018 VSVS12_02855 c1bce15a48a9a831e66345073aea2bac 175 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 10 172 22.078 T 11-10-2018 IPR006839 Ribosome-associated, YjgA VSVS12_01873 8632bb56d1d498fd54e3e5dde26ec8bc 211 Pfam PF00072 Response regulator receiver domain 7 119 7.7E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_01873 8632bb56d1d498fd54e3e5dde26ec8bc 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 6.6E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_01873 8632bb56d1d498fd54e3e5dde26ec8bc 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 6.6E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_01873 8632bb56d1d498fd54e3e5dde26ec8bc 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 6.6E-12 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_01873 8632bb56d1d498fd54e3e5dde26ec8bc 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 205 1.2E-17 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_01873 8632bb56d1d498fd54e3e5dde26ec8bc 211 SUPERFAMILY SSF52172 4 136 3.98E-35 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_01873 8632bb56d1d498fd54e3e5dde26ec8bc 211 Gene3D G3DSA:3.40.50.12740 5 211 8.6E-64 T 11-10-2018 VSVS12_01873 8632bb56d1d498fd54e3e5dde26ec8bc 211 SMART SM00448 5 118 4.9E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_01873 8632bb56d1d498fd54e3e5dde26ec8bc 211 SMART SM00421 148 205 3.8E-20 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_01873 8632bb56d1d498fd54e3e5dde26ec8bc 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_01873 8632bb56d1d498fd54e3e5dde26ec8bc 211 SUPERFAMILY SSF46894 142 211 3.23E-19 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VSVS12_02886 f07569710bf347ae68830175a54a68af 100 Gene3D G3DSA:2.40.50.140 1 100 1.1E-28 T 11-10-2018 VSVS12_02886 f07569710bf347ae68830175a54a68af 100 SUPERFAMILY SSF50249 1 99 1.37E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_02886 f07569710bf347ae68830175a54a68af 100 Hamap MF_00720 Primosomal replication protein N [priB]. 2 100 22.333 T 11-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 VSVS12_02886 f07569710bf347ae68830175a54a68af 100 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 3 99 4.8E-30 T 11-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 VSVS12_02886 f07569710bf347ae68830175a54a68af 100 PIRSF PIRSF003135 1 100 4.1E-44 T 11-10-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 VSVS12_02886 f07569710bf347ae68830175a54a68af 100 Pfam PF00436 Single-strand binding protein family 3 83 1.2E-7 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 VSVS12_01896 3a348dd64ddda080175d7124f2dce81e 506 SUPERFAMILY SSF117457 317 489 2.22E-63 T 11-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 VSVS12_01896 3a348dd64ddda080175d7124f2dce81e 506 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 326 488 5.1E-51 T 11-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 VSVS12_01896 3a348dd64ddda080175d7124f2dce81e 506 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 12 284 4.7E-62 T 11-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 VSVS12_01896 3a348dd64ddda080175d7124f2dce81e 506 Gene3D G3DSA:3.20.130.10 308 490 1.9E-61 T 11-10-2018 IPR036660 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain superfamily GO:0016836 VSVS12_01896 3a348dd64ddda080175d7124f2dce81e 506 Pfam PF05681 Fumarate hydratase (Fumerase) 11 285 1.8E-96 T 11-10-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 VSVS12_01896 3a348dd64ddda080175d7124f2dce81e 506 PIRSF PIRSF001394 1 506 5.4E-214 T 11-10-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 VSVS12_01896 3a348dd64ddda080175d7124f2dce81e 506 Pfam PF05683 Fumarase C-terminus 289 490 5.2E-83 T 11-10-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 VSVS12_01089 b4d840c4d7dc1b1dd1abf4af401b5e66 302 Gene3D G3DSA:1.10.530.10 130 286 3.3E-11 T 11-10-2018 VSVS12_01089 b4d840c4d7dc1b1dd1abf4af401b5e66 302 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 158 281 4.0E-11 T 11-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 VSVS12_01564 96deb80a14dbddba1c0a9d029a37741c 368 SUPERFAMILY SSF55031 177 287 5.5E-21 T 11-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain VSVS12_01564 96deb80a14dbddba1c0a9d029a37741c 368 PIRSF PIRSF001123 6 105 0.006 T 11-10-2018 IPR008007 Peptidase M42 VSVS12_01564 96deb80a14dbddba1c0a9d029a37741c 368 PIRSF PIRSF001123 99 191 1.1E-6 T 11-10-2018 IPR008007 Peptidase M42 VSVS12_01564 96deb80a14dbddba1c0a9d029a37741c 368 PIRSF PIRSF001123 262 368 1.3E-4 T 11-10-2018 IPR008007 Peptidase M42 VSVS12_01564 96deb80a14dbddba1c0a9d029a37741c 368 Pfam PF07687 Peptidase dimerisation domain 182 272 2.2E-12 T 11-10-2018 IPR011650 Peptidase M20, dimerisation domain VSVS12_01564 96deb80a14dbddba1c0a9d029a37741c 368 Gene3D G3DSA:3.40.630.10 16 362 3.9E-111 T 11-10-2018 VSVS12_01564 96deb80a14dbddba1c0a9d029a37741c 368 Pfam PF01546 Peptidase family M20/M25/M40 74 367 1.7E-19 T 11-10-2018 IPR002933 Peptidase M20 GO:0016787 VSVS12_01564 96deb80a14dbddba1c0a9d029a37741c 368 SUPERFAMILY SSF53187 7 367 7.86E-58 T 11-10-2018 VSVS12_01564 96deb80a14dbddba1c0a9d029a37741c 368 TIGRFAM TIGR01883 PepT-like: peptidase T-like protein 8 365 4.2E-155 T 11-10-2018 IPR010162 Peptidase M20B, peptidase T-like VSVS12_01564 96deb80a14dbddba1c0a9d029a37741c 368 Gene3D G3DSA:3.30.70.360 176 287 3.9E-111 T 11-10-2018 VSVS12_04346 58737c0025c4ae406ec60178e00df315 294 SUPERFAMILY SSF46785 3 83 1.45E-9 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_04346 58737c0025c4ae406ec60178e00df315 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 63 5.5E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_04346 58737c0025c4ae406ec60178e00df315 294 Gene3D G3DSA:3.40.190.10 87 282 1.3E-13 T 11-10-2018 VSVS12_04346 58737c0025c4ae406ec60178e00df315 294 Gene3D G3DSA:3.40.190.10 168 260 1.3E-13 T 11-10-2018 VSVS12_04346 58737c0025c4ae406ec60178e00df315 294 SUPERFAMILY SSF53850 87 285 5.43E-14 T 11-10-2018 VSVS12_04346 58737c0025c4ae406ec60178e00df315 294 Gene3D G3DSA:1.10.10.10 1 86 3.5E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_02422 f5cd14a25ef9d76febf83f3ef8150878 127 Pfam PF04355 SmpA / OmlA family 43 110 7.6E-24 T 11-10-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 VSVS12_02422 f5cd14a25ef9d76febf83f3ef8150878 127 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 15 120 32.603 T 11-10-2018 IPR026592 Outer membrane protein assembly factor BamE VSVS12_02422 f5cd14a25ef9d76febf83f3ef8150878 127 Gene3D G3DSA:3.30.1450.10 42 124 8.6E-23 T 11-10-2018 IPR037873 BamE-like VSVS12_02880 d4985cc347f8f3206175e0984dc44f56 139 SUPERFAMILY SSF111038 1 139 1.44E-48 T 11-10-2018 IPR035917 YjbQ-like superfamily VSVS12_02880 d4985cc347f8f3206175e0984dc44f56 139 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 100 118 - T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 VSVS12_02880 d4985cc347f8f3206175e0984dc44f56 139 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 8 139 5.7E-45 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 VSVS12_02880 d4985cc347f8f3206175e0984dc44f56 139 Pfam PF01894 Uncharacterised protein family UPF0047 19 135 2.3E-38 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 VSVS12_02880 d4985cc347f8f3206175e0984dc44f56 139 PIRSF PIRSF004681 1 139 1.2E-44 T 11-10-2018 IPR001602 Uncharacterised protein family UPF0047 VSVS12_02880 d4985cc347f8f3206175e0984dc44f56 139 Gene3D G3DSA:2.60.120.460 2 139 1.7E-41 T 11-10-2018 IPR035917 YjbQ-like superfamily VSVS12_01378 c15c247febe265c54497ad01e5b1bcf6 758 PIRSF PIRSF000379 5 758 0.0 T 11-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 VSVS12_01378 c15c247febe265c54497ad01e5b1bcf6 758 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 8 758 0.0 T 11-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 VSVS12_01378 c15c247febe265c54497ad01e5b1bcf6 758 ProSitePatterns PS00850 Glycine radical domain signature. 728 736 - T 11-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site VSVS12_01378 c15c247febe265c54497ad01e5b1bcf6 758 Pfam PF02901 Pyruvate formate lyase-like 21 612 1.2E-200 T 11-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 VSVS12_01378 c15c247febe265c54497ad01e5b1bcf6 758 Pfam PF01228 Glycine radical 628 739 1.9E-43 T 11-10-2018 IPR001150 Glycine radical domain GO:0003824 VSVS12_01378 c15c247febe265c54497ad01e5b1bcf6 758 SUPERFAMILY SSF51998 4 757 4.58E-285 T 11-10-2018 VSVS12_01378 c15c247febe265c54497ad01e5b1bcf6 758 Gene3D G3DSA:3.20.70.20 1 758 0.0 T 11-10-2018 VSVS12_02735 1327e007af0634b4347f521a742661e3 393 SUPERFAMILY SSF52540 5 147 3.36E-7 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02735 1327e007af0634b4347f521a742661e3 393 Pfam PF05707 Zonular occludens toxin (Zot) 2 192 4.6E-30 T 11-10-2018 IPR008900 Zona occludens toxin VSVS12_02735 1327e007af0634b4347f521a742661e3 393 Gene3D G3DSA:3.40.50.300 1 193 2.0E-38 T 11-10-2018 VSVS12_00260 e99eba76690749b7eebde4d762d63b69 161 PIRSF PIRSF001338 1 160 8.6E-68 T 11-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 VSVS12_00260 e99eba76690749b7eebde4d762d63b69 161 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 3 156 32.444 T 11-10-2018 IPR033747 Class I PurE VSVS12_00260 e99eba76690749b7eebde4d762d63b69 161 Pfam PF00731 AIR carboxylase 2 150 5.4E-64 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 VSVS12_00260 e99eba76690749b7eebde4d762d63b69 161 SMART SM01001 1 152 1.2E-102 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 VSVS12_00260 e99eba76690749b7eebde4d762d63b69 161 SUPERFAMILY SSF52255 2 158 2.75E-66 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 VSVS12_00260 e99eba76690749b7eebde4d762d63b69 161 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 3 157 1.7E-66 T 11-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 VSVS12_00260 e99eba76690749b7eebde4d762d63b69 161 Gene3D G3DSA:3.40.50.7700 1 161 2.2E-72 T 11-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 VSVS12_01765 50de223e39b1655559ec8919249a2bda 288 SUPERFAMILY SSF56091 31 207 2.33E-36 T 11-10-2018 VSVS12_01765 50de223e39b1655559ec8919249a2bda 288 SUPERFAMILY SSF50249 181 286 2.51E-28 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_01765 50de223e39b1655559ec8919249a2bda 288 Pfam PF14743 DNA ligase OB-like domain 222 286 3.7E-26 T 11-10-2018 IPR029319 DNA ligase, OB-like domain VSVS12_01765 50de223e39b1655559ec8919249a2bda 288 Pfam PF01068 ATP dependent DNA ligase domain 126 207 9.4E-7 T 11-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 VSVS12_01765 50de223e39b1655559ec8919249a2bda 288 Gene3D G3DSA:3.30.470.30 60 160 2.0E-54 T 11-10-2018 VSVS12_01765 50de223e39b1655559ec8919249a2bda 288 Gene3D G3DSA:2.40.50.140 207 288 3.8E-7 T 11-10-2018 VSVS12_01765 50de223e39b1655559ec8919249a2bda 288 ProSitePatterns PS00333 ATP-dependent DNA ligase signature 2. 184 207 - T 11-10-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 VSVS12_01765 50de223e39b1655559ec8919249a2bda 288 Gene3D G3DSA:3.30.1490.70 40 199 2.0E-54 T 11-10-2018 VSVS12_00458 2efa923c7583f0f25994dc8540edf5f4 163 TIGRFAM TIGR02444 TIGR02444: TIGR02444 family protein 13 119 2.4E-36 T 11-10-2018 IPR012659 Conserved hypothetical protein CHP02444 VSVS12_00458 2efa923c7583f0f25994dc8540edf5f4 163 Pfam PF09523 Protein of unknown function (DUF2390) 15 115 4.4E-27 T 11-10-2018 IPR012659 Conserved hypothetical protein CHP02444 VSVS12_00532 7d8ebad2d64f2f7ad7fdbab6d250d265 427 Pfam PF00999 Sodium/hydrogen exchanger family 14 416 6.1E-54 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VSVS12_02200 8848be3dec25f806049315e48b9b6bac 72 SMART SM00316 4 72 3.5E-6 T 11-10-2018 IPR022967 RNA-binding domain, S1 VSVS12_02200 8848be3dec25f806049315e48b9b6bac 72 SUPERFAMILY SSF50249 1 70 2.57E-28 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_02200 8848be3dec25f806049315e48b9b6bac 72 Gene3D G3DSA:2.40.50.140 1 72 1.5E-36 T 11-10-2018 VSVS12_02200 8848be3dec25f806049315e48b9b6bac 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 70 4.7E-38 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 VSVS12_02200 8848be3dec25f806049315e48b9b6bac 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.16 T 11-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 VSVS12_02200 8848be3dec25f806049315e48b9b6bac 72 Pfam PF01176 Translation initiation factor 1A / IF-1 8 70 5.3E-27 T 11-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 VSVS12_01076 3e6adb8e529bb6879095f4bb8c764687 709 Pfam PF05170 AsmA family 1 595 5.8E-116 T 11-10-2018 IPR007844 AsmA VSVS12_00446 033293b09ccbdc6245129b5c4487157f 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 5.2E-9 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VSVS12_00446 033293b09ccbdc6245129b5c4487157f 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 106 119 5.2E-9 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VSVS12_00446 033293b09ccbdc6245129b5c4487157f 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 155 175 5.2E-9 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VSVS12_00446 033293b09ccbdc6245129b5c4487157f 226 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 137 153 5.2E-9 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VSVS12_00446 033293b09ccbdc6245129b5c4487157f 226 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 7 221 1.5E-58 T 11-10-2018 IPR006346 2-phosphoglycolate phosphatase-like, prokaryotic GO:0016791 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 VSVS12_00446 033293b09ccbdc6245129b5c4487157f 226 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 82 191 7.9E-14 T 11-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 VSVS12_00446 033293b09ccbdc6245129b5c4487157f 226 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 81 192 6.0E-11 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VSVS12_00446 033293b09ccbdc6245129b5c4487157f 226 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 4 223 33.824 T 11-10-2018 IPR037512 Phosphoglycolate phosphatase, prokaryotic GO:0005975|GO:0008967 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 VSVS12_00446 033293b09ccbdc6245129b5c4487157f 226 Gene3D G3DSA:3.40.50.1000 7 214 1.3E-61 T 11-10-2018 IPR023214 HAD superfamily VSVS12_00446 033293b09ccbdc6245129b5c4487157f 226 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 101 187 3.4E-10 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VSVS12_00446 033293b09ccbdc6245129b5c4487157f 226 Gene3D G3DSA:1.10.150.240 19 92 1.3E-61 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VSVS12_00446 033293b09ccbdc6245129b5c4487157f 226 SUPERFAMILY SSF56784 3 222 1.88E-58 T 11-10-2018 IPR036412 HAD-like superfamily VSVS12_00446 033293b09ccbdc6245129b5c4487157f 226 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 191 8.5E-37 T 11-10-2018 VSVS12_04235 bdd19e537a460c940e66975b05e77a6c 265 Pfam PF03591 AzlC protein 53 191 2.5E-35 T 11-10-2018 IPR011606 Branched-chain amino acid transport, permease VSVS12_00560 efea54fd3e9bf78a79507e728243109c 541 Gene3D G3DSA:3.30.450.20 34 182 7.9E-31 T 11-10-2018 VSVS12_00560 efea54fd3e9bf78a79507e728243109c 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 502 2.9E-41 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_00560 efea54fd3e9bf78a79507e728243109c 541 Pfam PF17200 Single Cache domain 2 36 185 7.4E-34 T 11-10-2018 IPR033480 Single Cache domain 2 VSVS12_00560 efea54fd3e9bf78a79507e728243109c 541 Gene3D G3DSA:1.10.287.950 218 540 1.8E-64 T 11-10-2018 VSVS12_00560 efea54fd3e9bf78a79507e728243109c 541 SMART SM01049 30 124 2.0E-19 T 11-10-2018 IPR033480 Single Cache domain 2 VSVS12_00560 efea54fd3e9bf78a79507e728243109c 541 SUPERFAMILY SSF58104 244 539 1.96E-68 T 11-10-2018 VSVS12_00560 efea54fd3e9bf78a79507e728243109c 541 SMART SM00283 277 538 1.4E-69 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_00560 efea54fd3e9bf78a79507e728243109c 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 3 28 8.8E-24 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VSVS12_00560 efea54fd3e9bf78a79507e728243109c 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 375 402 8.8E-24 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VSVS12_00560 efea54fd3e9bf78a79507e728243109c 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 404 433 8.8E-24 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VSVS12_00076 1978b31da0ea105f799a4c6e9edaf375 290 Gene3D G3DSA:3.20.20.150 6 286 2.1E-83 T 11-10-2018 VSVS12_00076 1978b31da0ea105f799a4c6e9edaf375 290 SUPERFAMILY SSF51658 28 247 3.02E-7 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily VSVS12_00076 1978b31da0ea105f799a4c6e9edaf375 290 Pfam PF05114 Protein of unknown function (DUF692) 10 274 8.5E-101 T 11-10-2018 IPR007801 Uncharacterised protein family UPF0276 VSVS12_00672 bc01513528d50bf50b3b1a21f7fa99e1 222 Gene3D G3DSA:3.40.1050.10 1 222 3.4E-87 T 11-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 VSVS12_00672 bc01513528d50bf50b3b1a21f7fa99e1 222 Pfam PF00484 Carbonic anhydrase 38 188 1.0E-49 T 11-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VSVS12_00672 bc01513528d50bf50b3b1a21f7fa99e1 222 SMART SM00947 30 192 7.8E-66 T 11-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VSVS12_00672 bc01513528d50bf50b3b1a21f7fa99e1 222 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 11-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VSVS12_00672 bc01513528d50bf50b3b1a21f7fa99e1 222 SUPERFAMILY SSF53056 2 212 3.14E-73 T 11-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 VSVS12_00672 bc01513528d50bf50b3b1a21f7fa99e1 222 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 11-10-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 VSVS12_00309 8803d20af851cd2d318706cb9605296b 195 SUPERFAMILY SSF89360 4 100 2.35E-21 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VSVS12_00309 8803d20af851cd2d318706cb9605296b 195 Pfam PF01106 NifU-like domain 114 180 3.8E-19 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 VSVS12_00309 8803d20af851cd2d318706cb9605296b 195 Pfam PF01521 Iron-sulphur cluster biosynthesis 4 102 4.3E-13 T 11-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 VSVS12_00309 8803d20af851cd2d318706cb9605296b 195 Gene3D G3DSA:3.30.300.130 104 192 1.3E-18 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily VSVS12_00309 8803d20af851cd2d318706cb9605296b 195 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 122 181 2.0E-25 T 11-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 VSVS12_00309 8803d20af851cd2d318706cb9605296b 195 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 5 195 2.6E-95 T 11-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 VSVS12_00309 8803d20af851cd2d318706cb9605296b 195 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 4 195 43.969 T 11-10-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 VSVS12_00309 8803d20af851cd2d318706cb9605296b 195 SUPERFAMILY SSF117916 98 187 2.4E-22 T 11-10-2018 IPR034904 Fe-S cluster assembly domain superfamily VSVS12_00309 8803d20af851cd2d318706cb9605296b 195 Gene3D G3DSA:2.60.300.12 3 101 8.0E-14 T 11-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 VSVS12_01003 5600a634988bb6b6781013aab0d755f9 196 Pfam PF01195 Peptidyl-tRNA hydrolase 7 190 4.4E-53 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VSVS12_01003 5600a634988bb6b6781013aab0d755f9 196 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 5 184 35.524 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VSVS12_01003 5600a634988bb6b6781013aab0d755f9 196 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 112 122 - T 11-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 VSVS12_01003 5600a634988bb6b6781013aab0d755f9 196 Gene3D G3DSA:3.40.50.1470 1 196 6.8E-76 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 VSVS12_01003 5600a634988bb6b6781013aab0d755f9 196 SUPERFAMILY SSF53178 5 194 3.92E-69 T 11-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 VSVS12_01003 5600a634988bb6b6781013aab0d755f9 196 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 18 31 - T 11-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 VSVS12_01003 5600a634988bb6b6781013aab0d755f9 196 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 5 191 2.5E-68 T 11-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 VSVS12_02274 ba890a52a13a17a2211f1db202871983 308 Pfam PF01039 Carboxyl transferase domain 101 240 3.5E-15 T 11-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 VSVS12_02274 ba890a52a13a17a2211f1db202871983 308 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 284 2.9E-140 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VSVS12_02274 ba890a52a13a17a2211f1db202871983 308 Gene3D G3DSA:3.90.226.10 25 285 2.0E-84 T 11-10-2018 VSVS12_02274 ba890a52a13a17a2211f1db202871983 308 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 281 37.531 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VSVS12_02274 ba890a52a13a17a2211f1db202871983 308 SUPERFAMILY SSF52096 25 281 7.15E-85 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VSVS12_02274 ba890a52a13a17a2211f1db202871983 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 1.6E-38 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VSVS12_02274 ba890a52a13a17a2211f1db202871983 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 1.6E-38 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VSVS12_02274 ba890a52a13a17a2211f1db202871983 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 1.6E-38 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VSVS12_02274 ba890a52a13a17a2211f1db202871983 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 1.6E-38 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VSVS12_02274 ba890a52a13a17a2211f1db202871983 308 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 1.6E-38 T 11-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 VSVS12_02530 01d5f8445f6d7968d291ebeeaeec9a34 200 Pfam PF10144 Bacterial virulence factor haemolysin 11 152 4.2E-35 T 11-10-2018 IPR019305 Uncharacterised protein family Smp VSVS12_01998 eb5e8e055f9bd1e50c0b3f86a303589f 371 SUPERFAMILY SSF47188 1 132 3.53E-27 T 11-10-2018 IPR035938 Hemerythrin-like superfamily VSVS12_01998 eb5e8e055f9bd1e50c0b3f86a303589f 371 Gene3D G3DSA:3.30.70.270 191 367 8.4E-56 T 11-10-2018 VSVS12_01998 eb5e8e055f9bd1e50c0b3f86a303589f 371 Pfam PF01814 Hemerythrin HHE cation binding domain 13 127 5.8E-8 T 11-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 VSVS12_01998 eb5e8e055f9bd1e50c0b3f86a303589f 371 SUPERFAMILY SSF55073 211 365 1.65E-46 T 11-10-2018 IPR029787 Nucleotide cyclase VSVS12_01998 eb5e8e055f9bd1e50c0b3f86a303589f 371 TIGRFAM TIGR02481 hemeryth_dom: hemerythrin-like metal-binding domain 5 131 1.7E-29 T 11-10-2018 IPR012827 Haemerythrin, metal-binding domain GO:0046872 VSVS12_01998 eb5e8e055f9bd1e50c0b3f86a303589f 371 SMART SM00267 195 367 1.1E-58 T 11-10-2018 IPR000160 GGDEF domain VSVS12_01998 eb5e8e055f9bd1e50c0b3f86a303589f 371 ProSitePatterns PS00550 Hemerythrin family signature. 59 84 - T 11-10-2018 IPR016131 Haemerythrin, iron-binding site GO:0046872 VSVS12_01998 eb5e8e055f9bd1e50c0b3f86a303589f 371 Gene3D G3DSA:1.20.120.50 1 136 1.0E-27 T 11-10-2018 IPR035938 Hemerythrin-like superfamily VSVS12_01998 eb5e8e055f9bd1e50c0b3f86a303589f 371 Pfam PF00990 Diguanylate cyclase, GGDEF domain 207 363 7.6E-46 T 11-10-2018 IPR000160 GGDEF domain VSVS12_01998 eb5e8e055f9bd1e50c0b3f86a303589f 371 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 202 365 1.1E-49 T 11-10-2018 IPR000160 GGDEF domain VSVS12_00310 3e63558d724b170e2875ce1b11149fff 182 Gene3D G3DSA:3.90.79.10 7 182 1.3E-48 T 11-10-2018 VSVS12_00310 3e63558d724b170e2875ce1b11149fff 182 SUPERFAMILY SSF55811 4 179 1.22E-39 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VSVS12_00310 3e63558d724b170e2875ce1b11149fff 182 Pfam PF00293 NUDIX domain 47 155 1.8E-14 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VSVS12_00310 3e63558d724b170e2875ce1b11149fff 182 ProSitePatterns PS00893 Nudix box signature. 80 101 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VSVS12_01421 8adee3d897447746840a9b2b1a8bd973 373 SMART SM00471 168 319 1.7E-9 T 11-10-2018 IPR003607 HD/PDEase domain VSVS12_01421 8adee3d897447746840a9b2b1a8bd973 373 Pfam PF13487 HD domain 231 301 5.6E-19 T 11-10-2018 VSVS12_01421 8adee3d897447746840a9b2b1a8bd973 373 Gene3D G3DSA:1.10.3210.10 146 363 4.3E-77 T 11-10-2018 VSVS12_01421 8adee3d897447746840a9b2b1a8bd973 373 SMART SM00448 7 119 1.3E-35 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_01421 8adee3d897447746840a9b2b1a8bd973 373 Pfam PF00072 Response regulator receiver domain 9 119 1.2E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_01421 8adee3d897447746840a9b2b1a8bd973 373 Gene3D G3DSA:3.40.50.2300 7 143 1.5E-35 T 11-10-2018 VSVS12_01421 8adee3d897447746840a9b2b1a8bd973 373 SUPERFAMILY SSF52172 8 157 4.7E-37 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_01421 8adee3d897447746840a9b2b1a8bd973 373 SUPERFAMILY SSF109604 147 349 3.45E-31 T 11-10-2018 VSVS12_04476 45a4a319bd60929b5324c5f8c48aeac5 529 Gene3D G3DSA:1.10.3210.40 14 128 2.0E-5 T 11-10-2018 VSVS12_04476 45a4a319bd60929b5324c5f8c48aeac5 529 Pfam PF07515 Putative conjugal transfer nickase/helicase TraI C-term 412 512 3.7E-12 T 11-10-2018 IPR011093 Putative conjugal transfer nickase/helicase TraI, C-terminal VSVS12_04476 45a4a319bd60929b5324c5f8c48aeac5 529 Gene3D G3DSA:1.10.10.10 413 477 1.3E-7 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_04476 45a4a319bd60929b5324c5f8c48aeac5 529 Gene3D G3DSA:2.40.10.200 429 507 1.3E-7 T 11-10-2018 VSVS12_04476 45a4a319bd60929b5324c5f8c48aeac5 529 Pfam PF07514 Putative helicase 17 220 1.4E-35 T 11-10-2018 IPR011119 Uncharacterised domain, helicase/relaxase, putative VSVS12_04476 45a4a319bd60929b5324c5f8c48aeac5 529 SUPERFAMILY SSF46785 409 515 4.62E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_02853 a2f99229f03e606907ca254e3903fc59 136 SUPERFAMILY SSF53098 1 131 1.82E-34 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_02853 a2f99229f03e606907ca254e3903fc59 136 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 1 131 4.4E-46 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 VSVS12_02853 a2f99229f03e606907ca254e3903fc59 136 Gene3D G3DSA:3.30.420.140 1 133 1.6E-37 T 11-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 VSVS12_02853 a2f99229f03e606907ca254e3903fc59 136 Pfam PF03652 Holliday junction resolvase 1 131 7.7E-34 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 VSVS12_02853 a2f99229f03e606907ca254e3903fc59 136 SMART SM00732 1 99 5.0E-30 T 11-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 VSVS12_02853 a2f99229f03e606907ca254e3903fc59 136 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 1 134 20.586 T 11-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 VSVS12_01994 6411d07189d82e293567700031351458 801 SUPERFAMILY SSF56037 196 394 8.11E-77 T 11-10-2018 VSVS12_01994 6411d07189d82e293567700031351458 801 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 794 46.164 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 VSVS12_01994 6411d07189d82e293567700031351458 801 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 800 3.0E-272 T 11-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 VSVS12_01994 6411d07189d82e293567700031351458 801 Pfam PF03483 B3/4 domain 212 385 8.0E-71 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 VSVS12_01994 6411d07189d82e293567700031351458 801 Pfam PF01588 Putative tRNA binding domain 45 145 5.2E-25 T 11-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 VSVS12_01994 6411d07189d82e293567700031351458 801 Gene3D G3DSA:3.30.70.380 708 801 2.4E-29 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 VSVS12_01994 6411d07189d82e293567700031351458 801 SMART SM00896 707 800 2.0E-44 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 VSVS12_01994 6411d07189d82e293567700031351458 801 SUPERFAMILY SSF54991 703 800 8.63E-30 T 11-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 VSVS12_01994 6411d07189d82e293567700031351458 801 Gene3D G3DSA:3.50.40.10 197 395 2.2E-82 T 11-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 VSVS12_01994 6411d07189d82e293567700031351458 801 SMART SM00873 212 385 2.3E-99 T 11-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 VSVS12_01994 6411d07189d82e293567700031351458 801 Pfam PF03147 Ferredoxin-fold anticodon binding domain 707 800 2.7E-28 T 11-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 VSVS12_01994 6411d07189d82e293567700031351458 801 SUPERFAMILY SSF46955 404 475 1.92E-19 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily VSVS12_01994 6411d07189d82e293567700031351458 801 Gene3D G3DSA:2.40.50.140 39 154 5.9E-69 T 11-10-2018 VSVS12_01994 6411d07189d82e293567700031351458 801 Gene3D G3DSA:3.30.930.10 485 697 2.0E-58 T 11-10-2018 VSVS12_01994 6411d07189d82e293567700031351458 801 SUPERFAMILY SSF50249 38 196 7.71E-46 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_01994 6411d07189d82e293567700031351458 801 Gene3D G3DSA:3.30.56.10 401 475 7.9E-26 T 11-10-2018 VSVS12_01994 6411d07189d82e293567700031351458 801 Pfam PF03484 tRNA synthetase B5 domain 406 471 1.2E-17 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 VSVS12_01994 6411d07189d82e293567700031351458 801 SUPERFAMILY SSF55681 467 695 1.99E-48 T 11-10-2018 VSVS12_01994 6411d07189d82e293567700031351458 801 Gene3D G3DSA:3.30.56.10 7 179 5.9E-69 T 11-10-2018 VSVS12_01994 6411d07189d82e293567700031351458 801 SMART SM00874 403 471 1.8E-28 T 11-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 VSVS12_02499 c81689dda6e743d7536e52e8a777fd0c 343 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 253 285 1.1E-11 T 11-10-2018 IPR001451 Hexapeptide repeat VSVS12_02499 c81689dda6e743d7536e52e8a777fd0c 343 Gene3D G3DSA:2.160.10.10 172 343 9.6E-69 T 11-10-2018 VSVS12_02499 c81689dda6e743d7536e52e8a777fd0c 343 Gene3D G3DSA:3.30.70.2010 1 130 1.0E-38 T 11-10-2018 VSVS12_02499 c81689dda6e743d7536e52e8a777fd0c 343 Gene3D G3DSA:3.30.60.70 131 171 1.0E-20 T 11-10-2018 IPR038361 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain superfamily KEGG: 00300+2.3.1.117 VSVS12_02499 c81689dda6e743d7536e52e8a777fd0c 343 TIGRFAM TIGR03536 DapD_gpp: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 4 343 4.1E-179 T 11-10-2018 IPR019876 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, gammaproteobacteria KEGG: 00300+2.3.1.117 VSVS12_02499 c81689dda6e743d7536e52e8a777fd0c 343 SUPERFAMILY SSF51161 91 291 1.94E-34 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily VSVS12_02499 c81689dda6e743d7536e52e8a777fd0c 343 Pfam PF14789 Tetrahydrodipicolinate N-succinyltransferase middle 131 171 2.9E-16 T 11-10-2018 IPR032784 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase, middle domain KEGG: 00300+2.3.1.117 VSVS12_02499 c81689dda6e743d7536e52e8a777fd0c 343 Hamap MF_02122 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 2 340 45.617 T 11-10-2018 IPR026586 Type 2 tetrahydrodipicolinate N-succinyltransferase family GO:0008666 KEGG: 00300+2.3.1.117 VSVS12_00599 6ce24c4f137ba6e67f7925046bbd94b7 153 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 7.2E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_00599 6ce24c4f137ba6e67f7925046bbd94b7 153 SUPERFAMILY SSF54523 7 132 1.8E-13 T 11-10-2018 VSVS12_00599 6ce24c4f137ba6e67f7925046bbd94b7 153 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 2.0E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_00599 6ce24c4f137ba6e67f7925046bbd94b7 153 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_00599 6ce24c4f137ba6e67f7925046bbd94b7 153 Gene3D G3DSA:3.30.700.10 7 152 2.2E-15 T 11-10-2018 VSVS12_01516 4b720cc1267d80b454f0fac27976f5ee 472 SUPERFAMILY SSF52058 52 252 1.01E-12 T 11-10-2018 VSVS12_01516 4b720cc1267d80b454f0fac27976f5ee 472 Gene3D G3DSA:3.80.10.10 265 459 2.1E-37 T 11-10-2018 IPR032675 Leucine-rich repeat domain superfamily VSVS12_01516 4b720cc1267d80b454f0fac27976f5ee 472 Gene3D G3DSA:3.80.10.10 28 264 6.6E-28 T 11-10-2018 IPR032675 Leucine-rich repeat domain superfamily VSVS12_01516 4b720cc1267d80b454f0fac27976f5ee 472 SUPERFAMILY SSF52058 287 450 3.2E-18 T 11-10-2018 VSVS12_03133 6e3a437b0cbda69e272cc82dc5775533 380 PIRSF PIRSF001369 8 380 7.7E-117 T 11-10-2018 IPR024176 Citrate synthase, bacterial-type VSVS12_03133 6e3a437b0cbda69e272cc82dc5775533 380 Gene3D G3DSA:1.10.230.10 229 327 4.9E-116 T 11-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain VSVS12_03133 6e3a437b0cbda69e272cc82dc5775533 380 ProSitePatterns PS00480 Citrate synthase signature. 263 275 - T 11-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 VSVS12_03133 6e3a437b0cbda69e272cc82dc5775533 380 Pfam PF00285 Citrate synthase, C-terminal domain 15 362 3.2E-111 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 VSVS12_03133 6e3a437b0cbda69e272cc82dc5775533 380 Gene3D G3DSA:1.10.580.10 36 360 4.9E-116 T 11-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 VSVS12_03133 6e3a437b0cbda69e272cc82dc5775533 380 PRINTS PR00143 Citrate synthase signature 130 143 7.0E-34 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 VSVS12_03133 6e3a437b0cbda69e272cc82dc5775533 380 PRINTS PR00143 Citrate synthase signature 203 231 7.0E-34 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 VSVS12_03133 6e3a437b0cbda69e272cc82dc5775533 380 PRINTS PR00143 Citrate synthase signature 256 276 7.0E-34 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 VSVS12_03133 6e3a437b0cbda69e272cc82dc5775533 380 PRINTS PR00143 Citrate synthase signature 181 196 7.0E-34 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 VSVS12_03133 6e3a437b0cbda69e272cc82dc5775533 380 PRINTS PR00143 Citrate synthase signature 313 329 7.0E-34 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 VSVS12_03133 6e3a437b0cbda69e272cc82dc5775533 380 PRINTS PR00143 Citrate synthase signature 333 347 7.0E-34 T 11-10-2018 IPR002020 Citrate synthase GO:0046912 VSVS12_03133 6e3a437b0cbda69e272cc82dc5775533 380 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 15 380 2.7E-159 T 11-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 VSVS12_03133 6e3a437b0cbda69e272cc82dc5775533 380 SUPERFAMILY SSF48256 13 380 9.03E-122 T 11-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 VSVS12_00218 2c73f334fc03b85a8ca31d7aa7a2a126 313 Pfam PF03466 LysR substrate binding domain 99 299 1.9E-22 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_00218 2c73f334fc03b85a8ca31d7aa7a2a126 313 SUPERFAMILY SSF46785 7 87 4.86E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_00218 2c73f334fc03b85a8ca31d7aa7a2a126 313 Gene3D G3DSA:1.10.10.10 3 90 2.8E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_00218 2c73f334fc03b85a8ca31d7aa7a2a126 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 1.1E-14 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_00218 2c73f334fc03b85a8ca31d7aa7a2a126 313 SUPERFAMILY SSF53850 92 298 1.39E-39 T 11-10-2018 VSVS12_00218 2c73f334fc03b85a8ca31d7aa7a2a126 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 1.6E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_00218 2c73f334fc03b85a8ca31d7aa7a2a126 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 1.6E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_00218 2c73f334fc03b85a8ca31d7aa7a2a126 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 1.6E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_00218 2c73f334fc03b85a8ca31d7aa7a2a126 313 Gene3D G3DSA:3.40.190.10 93 295 6.3E-68 T 11-10-2018 VSVS12_00218 2c73f334fc03b85a8ca31d7aa7a2a126 313 Gene3D G3DSA:3.40.190.10 172 271 6.3E-68 T 11-10-2018 VSVS12_02250 2472ea60e1793af4039ae06f85ea3246 376 SUPERFAMILY SSF52172 3 109 1.37E-26 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_02250 2472ea60e1793af4039ae06f85ea3246 376 Pfam PF01339 CheB methylesterase 191 368 7.4E-59 T 11-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VSVS12_02250 2472ea60e1793af4039ae06f85ea3246 376 SMART SM00448 3 126 4.9E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_02250 2472ea60e1793af4039ae06f85ea3246 376 Gene3D G3DSA:3.40.50.180 183 372 1.0E-64 T 11-10-2018 IPR035909 Methylesterase CheB, C-terminal VSVS12_02250 2472ea60e1793af4039ae06f85ea3246 376 Gene3D G3DSA:3.40.50.2300 2 132 3.7E-31 T 11-10-2018 VSVS12_02250 2472ea60e1793af4039ae06f85ea3246 376 SUPERFAMILY SSF52738 185 370 2.88E-63 T 11-10-2018 IPR035909 Methylesterase CheB, C-terminal VSVS12_02250 2472ea60e1793af4039ae06f85ea3246 376 Pfam PF00072 Response regulator receiver domain 5 109 1.1E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_02250 2472ea60e1793af4039ae06f85ea3246 376 PIRSF PIRSF000876 1 374 8.7E-128 T 11-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VSVS12_02250 2472ea60e1793af4039ae06f85ea3246 376 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 3 374 38.936 T 11-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 VSVS12_02863 22f5442590faa340d436be90e007dadf 175 SUPERFAMILY SSF50324 3 174 3.27E-64 T 11-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 VSVS12_02863 22f5442590faa340d436be90e007dadf 175 Pfam PF00719 Inorganic pyrophosphatase 18 173 8.4E-51 T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 VSVS12_02863 22f5442590faa340d436be90e007dadf 175 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 VSVS12_02863 22f5442590faa340d436be90e007dadf 175 Gene3D G3DSA:3.90.80.10 1 175 5.5E-66 T 11-10-2018 IPR036649 Inorganic pyrophosphatase superfamily GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 VSVS12_02863 22f5442590faa340d436be90e007dadf 175 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 35.344 T 11-10-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 VSVS12_02147 3cd22e08fd674eb53e4dbf06352a574e 35 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 30 1.1E-20 T 11-10-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 VSVS12_02147 3cd22e08fd674eb53e4dbf06352a574e 35 Pfam PF08173 Membrane bound YbgT-like protein 1 27 1.3E-17 T 11-10-2018 IPR012994 Membrane bound YbgT-like VSVS12_04151 4f569a21e2ac477107c4fd47268943fa 645 SUPERFAMILY SSF53300 89 277 4.11E-18 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VSVS12_04151 4f569a21e2ac477107c4fd47268943fa 645 Pfam PF13519 von Willebrand factor type A domain 89 195 8.6E-12 T 11-10-2018 IPR002035 von Willebrand factor, type A VSVS12_04151 4f569a21e2ac477107c4fd47268943fa 645 Pfam PF07719 Tetratricopeptide repeat 399 429 9.5E-6 T 11-10-2018 IPR013105 Tetratricopeptide repeat 2 VSVS12_04151 4f569a21e2ac477107c4fd47268943fa 645 SMART SM00028 396 429 3.5E-5 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_04151 4f569a21e2ac477107c4fd47268943fa 645 Gene3D G3DSA:3.40.50.410 84 289 5.9E-30 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VSVS12_04151 4f569a21e2ac477107c4fd47268943fa 645 Gene3D G3DSA:1.25.40.10 342 459 1.2E-9 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_04151 4f569a21e2ac477107c4fd47268943fa 645 SUPERFAMILY SSF48452 350 444 1.35E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_03876 f836841030d340da5f46648a239414ac 472 SMART SM00388 264 331 1.4E-4 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_03876 f836841030d340da5f46648a239414ac 472 Pfam PF00512 His Kinase A (phospho-acceptor) domain 269 320 2.2E-6 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_03876 f836841030d340da5f46648a239414ac 472 Pfam PF11884 Domain of unknown function (DUF3404) 6 263 4.9E-106 T 11-10-2018 IPR021821 Protein of unknown function DUF3404 VSVS12_03876 f836841030d340da5f46648a239414ac 472 SUPERFAMILY SSF47384 260 330 8.63E-7 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VSVS12_03876 f836841030d340da5f46648a239414ac 472 Gene3D G3DSA:1.10.287.130 271 328 3.8E-17 T 11-10-2018 VSVS12_03876 f836841030d340da5f46648a239414ac 472 Gene3D G3DSA:3.30.565.10 329 464 3.8E-17 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_03876 f836841030d340da5f46648a239414ac 472 SUPERFAMILY SSF55874 340 467 1.26E-17 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_03876 f836841030d340da5f46648a239414ac 472 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 374 465 5.6E-9 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_03876 f836841030d340da5f46648a239414ac 472 SMART SM00387 369 467 1.5E-12 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_00099 551912aaa265b142e9d0de6dd1ad0358 325 SUPERFAMILY SSF161098 89 302 1.27E-17 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_00099 551912aaa265b142e9d0de6dd1ad0358 325 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 318 9.8E-40 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VSVS12_00099 551912aaa265b142e9d0de6dd1ad0358 325 Gene3D G3DSA:1.10.3720.10 84 314 4.2E-20 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_04342 8745291246b81e4c3ba5097f0daedc19 308 SUPERFAMILY SSF52540 5 227 9.65E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_04342 8745291246b81e4c3ba5097f0daedc19 308 SMART SM00382 30 212 8.6E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_04342 8745291246b81e4c3ba5097f0daedc19 308 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_04342 8745291246b81e4c3ba5097f0daedc19 308 Gene3D G3DSA:3.40.50.300 1 236 4.5E-72 T 11-10-2018 VSVS12_04342 8745291246b81e4c3ba5097f0daedc19 308 Pfam PF00005 ABC transporter 22 165 3.9E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_00638 0fba8c7c8c295b5e4b7d3ee4de502de6 159 Gene3D G3DSA:3.40.430.10 1 159 2.0E-58 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 VSVS12_00638 0fba8c7c8c295b5e4b7d3ee4de502de6 159 SUPERFAMILY SSF53597 1 159 3.23E-56 T 11-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 VSVS12_00638 0fba8c7c8c295b5e4b7d3ee4de502de6 159 PRINTS PR00070 Dihydrofolate reductase signature 41 52 5.6E-14 T 11-10-2018 VSVS12_00638 0fba8c7c8c295b5e4b7d3ee4de502de6 159 PRINTS PR00070 Dihydrofolate reductase signature 28 36 5.6E-14 T 11-10-2018 VSVS12_00638 0fba8c7c8c295b5e4b7d3ee4de502de6 159 PRINTS PR00070 Dihydrofolate reductase signature 92 106 5.6E-14 T 11-10-2018 VSVS12_00638 0fba8c7c8c295b5e4b7d3ee4de502de6 159 PRINTS PR00070 Dihydrofolate reductase signature 14 24 5.6E-14 T 11-10-2018 VSVS12_00638 0fba8c7c8c295b5e4b7d3ee4de502de6 159 PIRSF PIRSF000194 1 159 3.5E-61 T 11-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 VSVS12_00638 0fba8c7c8c295b5e4b7d3ee4de502de6 159 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 14 36 - T 11-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 VSVS12_00638 0fba8c7c8c295b5e4b7d3ee4de502de6 159 Pfam PF00186 Dihydrofolate reductase 3 158 2.2E-60 T 11-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 VSVS12_03548 f67e7f1fd3efdddcdde15f2c335fa66d 323 Gene3D G3DSA:3.40.190.10 123 249 8.8E-59 T 11-10-2018 VSVS12_03548 f67e7f1fd3efdddcdde15f2c335fa66d 323 PIRSF PIRSF017082 10 323 3.3E-82 T 11-10-2018 IPR005064 Bordetella uptake gene GO:0030288 VSVS12_03548 f67e7f1fd3efdddcdde15f2c335fa66d 323 Gene3D G3DSA:3.40.190.150 29 313 8.8E-59 T 11-10-2018 VSVS12_03548 f67e7f1fd3efdddcdde15f2c335fa66d 323 SUPERFAMILY SSF53850 103 288 7.72E-7 T 11-10-2018 VSVS12_03548 f67e7f1fd3efdddcdde15f2c335fa66d 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 56 320 3.8E-24 T 11-10-2018 IPR005064 Bordetella uptake gene GO:0030288 VSVS12_00085 2051fd45c798a763a9d20be051cc0166 395 Gene3D G3DSA:3.40.640.10 1 258 7.3E-73 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VSVS12_00085 2051fd45c798a763a9d20be051cc0166 395 SUPERFAMILY SSF53383 21 394 9.99E-90 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VSVS12_00085 2051fd45c798a763a9d20be051cc0166 395 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 202 216 - T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VSVS12_00085 2051fd45c798a763a9d20be051cc0166 395 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 392 4.5E-114 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VSVS12_00085 2051fd45c798a763a9d20be051cc0166 395 Gene3D G3DSA:3.90.1150.10 259 395 9.4E-41 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VSVS12_00085 2051fd45c798a763a9d20be051cc0166 395 PIRSF PIRSF001434 1 395 6.9E-115 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VSVS12_00085 2051fd45c798a763a9d20be051cc0166 395 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 8 394 8.6E-176 T 11-10-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 VSVS12_02690 f60dba6fa361eaef98dd671600ed8c54 102 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 6 98 8.7E-35 T 11-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 VSVS12_02690 f60dba6fa361eaef98dd671600ed8c54 102 PIRSF PIRSF000699 1 102 4.0E-38 T 11-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 VSVS12_02690 f60dba6fa361eaef98dd671600ed8c54 102 SUPERFAMILY SSF46973 2 98 3.79E-35 T 11-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 VSVS12_02690 f60dba6fa361eaef98dd671600ed8c54 102 Gene3D G3DSA:1.20.58.280 2 102 1.9E-36 T 11-10-2018 VSVS12_02495 d55b3055b2b7cee3b6a00ad8cd8fa7f9 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 68 7.0E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_02495 d55b3055b2b7cee3b6a00ad8cd8fa7f9 301 SUPERFAMILY SSF53850 95 300 3.8E-31 T 11-10-2018 VSVS12_02495 d55b3055b2b7cee3b6a00ad8cd8fa7f9 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 6.3E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_02495 d55b3055b2b7cee3b6a00ad8cd8fa7f9 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 6.3E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_02495 d55b3055b2b7cee3b6a00ad8cd8fa7f9 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 6.3E-5 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_02495 d55b3055b2b7cee3b6a00ad8cd8fa7f9 301 SUPERFAMILY SSF46785 4 117 3.55E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_02495 d55b3055b2b7cee3b6a00ad8cd8fa7f9 301 Gene3D G3DSA:3.40.190.10 168 269 1.4E-51 T 11-10-2018 VSVS12_02495 d55b3055b2b7cee3b6a00ad8cd8fa7f9 301 Gene3D G3DSA:3.40.190.10 98 297 1.4E-51 T 11-10-2018 VSVS12_02495 d55b3055b2b7cee3b6a00ad8cd8fa7f9 301 Pfam PF03466 LysR substrate binding domain 94 299 6.7E-35 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_02495 d55b3055b2b7cee3b6a00ad8cd8fa7f9 301 Gene3D G3DSA:1.10.10.10 2 90 1.3E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_02419 52c025b920845664832de97d3155af05 294 Pfam PF01513 ATP-NAD kinase 8 273 5.5E-72 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 VSVS12_02419 52c025b920845664832de97d3155af05 294 Hamap MF_00361 NAD kinase [nadK]. 6 289 33.448 T 11-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 VSVS12_02419 52c025b920845664832de97d3155af05 294 SUPERFAMILY SSF111331 8 290 2.22E-92 T 11-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily VSVS12_02419 52c025b920845664832de97d3155af05 294 Gene3D G3DSA:3.40.50.10330 23 289 2.4E-92 T 11-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 VSVS12_02419 52c025b920845664832de97d3155af05 294 Gene3D G3DSA:2.60.200.30 129 266 2.4E-92 T 11-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 VSVS12_01818 d7e8863f29b9bc6a20f4e459a8d73ff2 225 Pfam PF01810 LysE type translocator 31 220 8.9E-37 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VSVS12_01818 d7e8863f29b9bc6a20f4e459a8d73ff2 225 PIRSF PIRSF006324 16 224 3.5E-61 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VSVS12_01289 456f835f45ca3f294fe3728c53a34814 469 SUPERFAMILY SSF56801 6 462 1.83E-86 T 11-10-2018 VSVS12_01289 456f835f45ca3f294fe3728c53a34814 469 Gene3D G3DSA:3.30.300.30 365 467 5.7E-16 T 11-10-2018 VSVS12_01289 456f835f45ca3f294fe3728c53a34814 469 Pfam PF13193 AMP-binding enzyme C-terminal domain 378 442 2.2E-6 T 11-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain VSVS12_01289 456f835f45ca3f294fe3728c53a34814 469 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 27 457 1.5E-128 T 11-10-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 VSVS12_01289 456f835f45ca3f294fe3728c53a34814 469 Pfam PF00501 AMP-binding enzyme 12 369 1.5E-47 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VSVS12_01289 456f835f45ca3f294fe3728c53a34814 469 Gene3D G3DSA:3.40.50.12780 3 364 2.1E-62 T 11-10-2018 VSVS12_01488 256d4dcc0a5f8bf91cf3f42f3bec6d22 769 Gene3D G3DSA:2.20.110.10 69 165 4.2E-11 T 11-10-2018 VSVS12_01488 256d4dcc0a5f8bf91cf3f42f3bec6d22 769 Gene3D G3DSA:2.20.110.10 574 650 2.4E-6 T 11-10-2018 VSVS12_01488 256d4dcc0a5f8bf91cf3f42f3bec6d22 769 Gene3D G3DSA:2.20.110.10 166 255 5.5E-12 T 11-10-2018 VSVS12_01488 256d4dcc0a5f8bf91cf3f42f3bec6d22 769 Gene3D G3DSA:2.20.110.10 493 573 3.5E-7 T 11-10-2018 VSVS12_01488 256d4dcc0a5f8bf91cf3f42f3bec6d22 769 Gene3D G3DSA:2.20.110.10 672 768 6.6E-14 T 11-10-2018 VSVS12_01488 256d4dcc0a5f8bf91cf3f42f3bec6d22 769 SUPERFAMILY SSF82185 475 553 3.92E-10 T 11-10-2018 VSVS12_01488 256d4dcc0a5f8bf91cf3f42f3bec6d22 769 Pfam PF07661 MORN repeat variant 269 290 0.0015 T 11-10-2018 IPR011652 MORN variant VSVS12_01488 256d4dcc0a5f8bf91cf3f42f3bec6d22 769 Pfam PF07661 MORN repeat variant 702 721 0.061 T 11-10-2018 IPR011652 MORN variant VSVS12_01488 256d4dcc0a5f8bf91cf3f42f3bec6d22 769 Pfam PF07661 MORN repeat variant 246 266 0.001 T 11-10-2018 IPR011652 MORN variant VSVS12_01488 256d4dcc0a5f8bf91cf3f42f3bec6d22 769 Pfam PF07661 MORN repeat variant 172 193 0.0059 T 11-10-2018 IPR011652 MORN variant VSVS12_01488 256d4dcc0a5f8bf91cf3f42f3bec6d22 769 Pfam PF07661 MORN repeat variant 319 336 0.014 T 11-10-2018 IPR011652 MORN variant VSVS12_01488 256d4dcc0a5f8bf91cf3f42f3bec6d22 769 Pfam PF07661 MORN repeat variant 349 369 0.1 T 11-10-2018 IPR011652 MORN variant VSVS12_01488 256d4dcc0a5f8bf91cf3f42f3bec6d22 769 Pfam PF07661 MORN repeat variant 101 121 0.3 T 11-10-2018 IPR011652 MORN variant VSVS12_01488 256d4dcc0a5f8bf91cf3f42f3bec6d22 769 Pfam PF07661 MORN repeat variant 221 241 0.18 T 11-10-2018 IPR011652 MORN variant VSVS12_01488 256d4dcc0a5f8bf91cf3f42f3bec6d22 769 Pfam PF07661 MORN repeat variant 654 674 7.2E-4 T 11-10-2018 IPR011652 MORN variant VSVS12_01488 256d4dcc0a5f8bf91cf3f42f3bec6d22 769 Pfam PF07661 MORN repeat variant 726 745 0.052 T 11-10-2018 IPR011652 MORN variant VSVS12_01488 256d4dcc0a5f8bf91cf3f42f3bec6d22 769 Pfam PF07661 MORN repeat variant 396 416 0.05 T 11-10-2018 IPR011652 MORN variant VSVS12_01488 256d4dcc0a5f8bf91cf3f42f3bec6d22 769 Gene3D G3DSA:3.90.930.1 379 473 8.1E-10 T 11-10-2018 VSVS12_01488 256d4dcc0a5f8bf91cf3f42f3bec6d22 769 Gene3D G3DSA:3.90.930.1 256 378 3.9E-15 T 11-10-2018 VSVS12_01488 256d4dcc0a5f8bf91cf3f42f3bec6d22 769 SUPERFAMILY SSF82185 648 766 2.09E-22 T 11-10-2018 VSVS12_01488 256d4dcc0a5f8bf91cf3f42f3bec6d22 769 SUPERFAMILY SSF82185 565 642 5.36E-10 T 11-10-2018 VSVS12_01488 256d4dcc0a5f8bf91cf3f42f3bec6d22 769 SUPERFAMILY SSF82185 349 460 2.09E-15 T 11-10-2018 VSVS12_01488 256d4dcc0a5f8bf91cf3f42f3bec6d22 769 SUPERFAMILY SSF82185 208 334 2.22E-24 T 11-10-2018 VSVS12_01488 256d4dcc0a5f8bf91cf3f42f3bec6d22 769 SUPERFAMILY SSF82185 63 191 7.19E-23 T 11-10-2018 VSVS12_00575 f8e733c40b777fe071bb301da9822baa 272 PIRSF PIRSF000193 3 270 1.5E-71 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 VSVS12_00575 f8e733c40b777fe071bb301da9822baa 272 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 268 2.5E-29 T 11-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 VSVS12_00575 f8e733c40b777fe071bb301da9822baa 272 Gene3D G3DSA:1.10.3730.10 165 272 1.2E-33 T 11-10-2018 VSVS12_00575 f8e733c40b777fe071bb301da9822baa 272 Gene3D G3DSA:3.40.50.720 2 164 3.4E-50 T 11-10-2018 VSVS12_00575 f8e733c40b777fe071bb301da9822baa 272 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 224 246 - T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 VSVS12_00575 f8e733c40b777fe071bb301da9822baa 272 SUPERFAMILY SSF51735 4 160 1.81E-37 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_00575 f8e733c40b777fe071bb301da9822baa 272 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 4 268 25.434 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 VSVS12_00575 f8e733c40b777fe071bb301da9822baa 272 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 6 268 6.3E-71 T 11-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 VSVS12_00575 f8e733c40b777fe071bb301da9822baa 272 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 5 99 1.5E-20 T 11-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal VSVS12_00575 f8e733c40b777fe071bb301da9822baa 272 SUPERFAMILY SSF48179 163 270 7.65E-30 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VSVS12_01006 c2a081cdfb26dbe17a5dd03370189d63 205 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 5 204 26.074 T 11-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 VSVS12_01006 c2a081cdfb26dbe17a5dd03370189d63 205 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 8 203 4.9E-40 T 11-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 VSVS12_01006 c2a081cdfb26dbe17a5dd03370189d63 205 Pfam PF03550 Outer membrane lipoprotein LolB 46 202 4.9E-42 T 11-10-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 VSVS12_01006 c2a081cdfb26dbe17a5dd03370189d63 205 SUPERFAMILY SSF89392 21 204 4.32E-48 T 11-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX VSVS12_01006 c2a081cdfb26dbe17a5dd03370189d63 205 Gene3D G3DSA:2.50.20.10 26 205 9.5E-53 T 11-10-2018 VSVS12_04409 52b9f6c4cd78264fe74143092cda8dbc 304 Gene3D G3DSA:3.30.70.1270 4 265 3.6E-78 T 11-10-2018 VSVS12_04409 52b9f6c4cd78264fe74143092cda8dbc 304 Pfam PF06924 Protein of unknown function (DUF1281) 19 138 1.0E-25 T 11-10-2018 IPR009694 Protein of unknown function DUF1281 VSVS12_04409 52b9f6c4cd78264fe74143092cda8dbc 304 SUPERFAMILY SSF160940 3 274 3.01E-47 T 11-10-2018 VSVS12_04409 52b9f6c4cd78264fe74143092cda8dbc 304 Gene3D G3DSA:1.10.3530.10 28 205 3.6E-78 T 11-10-2018 IPR023136 Api92-like domain superfamily VSVS12_02230 8e6c4a152b160b914fcd633b2ce86c07 704 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 494 587 2.8E-24 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VSVS12_02230 8e6c4a152b160b914fcd633b2ce86c07 704 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 617 690 1.5E-5 T 11-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VSVS12_02230 8e6c4a152b160b914fcd633b2ce86c07 704 Gene3D G3DSA:3.40.50.720 303 496 9.9E-60 T 11-10-2018 VSVS12_02230 8e6c4a152b160b914fcd633b2ce86c07 704 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 491 516 - T 11-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VSVS12_02230 8e6c4a152b160b914fcd633b2ce86c07 704 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 6 703 0.0 T 11-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VSVS12_02230 8e6c4a152b160b914fcd633b2ce86c07 704 Gene3D G3DSA:3.90.226.10 2 302 2.0E-96 T 11-10-2018 VSVS12_02230 8e6c4a152b160b914fcd633b2ce86c07 704 SUPERFAMILY SSF48179 494 594 3.4E-27 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VSVS12_02230 8e6c4a152b160b914fcd633b2ce86c07 704 SUPERFAMILY SSF51735 309 492 2.09E-47 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_02230 8e6c4a152b160b914fcd633b2ce86c07 704 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 223 3.7E-37 T 11-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 VSVS12_02230 8e6c4a152b160b914fcd633b2ce86c07 704 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 11-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 VSVS12_02230 8e6c4a152b160b914fcd633b2ce86c07 704 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 313 492 3.6E-55 T 11-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VSVS12_02230 8e6c4a152b160b914fcd633b2ce86c07 704 Hamap MF_01617 Fatty acid oxidation complex subunit alpha [fadJ]. 1 703 51.873 T 11-10-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 VSVS12_02230 8e6c4a152b160b914fcd633b2ce86c07 704 Gene3D G3DSA:1.10.1040.50 497 694 1.4E-69 T 11-10-2018 VSVS12_02230 8e6c4a152b160b914fcd633b2ce86c07 704 SUPERFAMILY SSF52096 2 302 2.55E-65 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VSVS12_02230 8e6c4a152b160b914fcd633b2ce86c07 704 SUPERFAMILY SSF48179 612 704 4.17E-25 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VSVS12_02044 6337c271e7c6a46a48bdadcc5b59a8d7 361 Gene3D G3DSA:1.10.287.470 91 150 2.7E-70 T 11-10-2018 VSVS12_02044 6337c271e7c6a46a48bdadcc5b59a8d7 361 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 69 89 3.2E-5 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VSVS12_02044 6337c271e7c6a46a48bdadcc5b59a8d7 361 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 345 360 3.2E-5 T 11-10-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 VSVS12_02044 6337c271e7c6a46a48bdadcc5b59a8d7 361 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 54 252 3.0E-11 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VSVS12_02044 6337c271e7c6a46a48bdadcc5b59a8d7 361 Gene3D G3DSA:2.40.420.20 36 351 2.7E-70 T 11-10-2018 VSVS12_02044 6337c271e7c6a46a48bdadcc5b59a8d7 361 Gene3D G3DSA:2.40.30.170 42 269 2.7E-70 T 11-10-2018 VSVS12_02044 6337c271e7c6a46a48bdadcc5b59a8d7 361 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 33 353 8.9E-66 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VSVS12_02044 6337c271e7c6a46a48bdadcc5b59a8d7 361 Gene3D G3DSA:2.40.50.100 57 189 2.7E-70 T 11-10-2018 VSVS12_02044 6337c271e7c6a46a48bdadcc5b59a8d7 361 SUPERFAMILY SSF111369 50 264 1.57E-28 T 11-10-2018 VSVS12_03326 629bf333ee3c641e656909230805ecee 211 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 10 190 1.5E-18 T 11-10-2018 IPR013830 SGNH hydrolase-type esterase domain VSVS12_03326 629bf333ee3c641e656909230805ecee 211 SUPERFAMILY SSF52266 6 209 7.79E-29 T 11-10-2018 VSVS12_03326 629bf333ee3c641e656909230805ecee 211 Gene3D G3DSA:3.40.50.1110 1 210 4.1E-66 T 11-10-2018 IPR036514 SGNH hydrolase superfamily VSVS12_02994 728590dfb258ad352c388be0e19b1f65 110 SUPERFAMILY SSF52141 2 109 2.13E-31 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VSVS12_02994 728590dfb258ad352c388be0e19b1f65 110 Pfam PF03167 Uracil DNA glycosylase superfamily 30 108 5.4E-11 T 11-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VSVS12_02994 728590dfb258ad352c388be0e19b1f65 110 Gene3D G3DSA:3.40.470.10 1 110 2.7E-37 T 11-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 VSVS12_03333 dccd31fe27e97ecac67d1da415c3fb03 467 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 8 94 7.2E-18 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VSVS12_03333 dccd31fe27e97ecac67d1da415c3fb03 467 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 7 91 5.6E-33 T 11-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 VSVS12_03333 dccd31fe27e97ecac67d1da415c3fb03 467 SUPERFAMILY SSF52794 5 101 1.92E-32 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VSVS12_03333 dccd31fe27e97ecac67d1da415c3fb03 467 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 121 456 1.9E-49 T 11-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 VSVS12_03333 dccd31fe27e97ecac67d1da415c3fb03 467 Gene3D G3DSA:3.40.50.2300 1 104 1.6E-37 T 11-10-2018 VSVS12_03333 dccd31fe27e97ecac67d1da415c3fb03 467 Pfam PF02378 Phosphotransferase system, EIIC 131 407 1.6E-14 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VSVS12_02671 8b765229a0174b305894153cb23f8421 602 Gene3D G3DSA:3.40.50.12780 1 313 4.4E-54 T 11-10-2018 VSVS12_02671 8b765229a0174b305894153cb23f8421 602 Pfam PF00501 AMP-binding enzyme 13 466 5.1E-99 T 11-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 VSVS12_02671 8b765229a0174b305894153cb23f8421 602 ProSitePatterns PS00455 Putative AMP-binding domain signature. 183 194 - T 11-10-2018 IPR020845 AMP-binding, conserved site VSVS12_02671 8b765229a0174b305894153cb23f8421 602 Gene3D G3DSA:3.40.50.12780 320 459 4.0E-33 T 11-10-2018 VSVS12_02671 8b765229a0174b305894153cb23f8421 602 SUPERFAMILY SSF56801 7 596 2.75E-114 T 11-10-2018 VSVS12_00805 2a0557cfd8eb29b4d0ad5325cf110f94 241 Gene3D G3DSA:3.40.1280.10 1 164 4.1E-62 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VSVS12_00805 2a0557cfd8eb29b4d0ad5325cf110f94 241 Gene3D G3DSA:1.10.8.590 174 241 3.9E-28 T 11-10-2018 VSVS12_00805 2a0557cfd8eb29b4d0ad5325cf110f94 241 PIRSF PIRSF004808 1 241 3.5E-73 T 11-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 VSVS12_00805 2a0557cfd8eb29b4d0ad5325cf110f94 241 Pfam PF00588 SpoU rRNA Methylase family 5 154 1.3E-32 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VSVS12_00805 2a0557cfd8eb29b4d0ad5325cf110f94 241 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 238 1.3E-83 T 11-10-2018 IPR004384 RNA methyltransferase TrmJ/LasT GO:0006396|GO:0008173 VSVS12_00805 2a0557cfd8eb29b4d0ad5325cf110f94 241 SUPERFAMILY SSF75217 4 170 1.44E-36 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases VSVS12_00385 1390ac08d1fb7b4d54ed736cbc3a84bb 384 Pfam PF00534 Glycosyl transferases group 1 208 303 1.3E-10 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 VSVS12_00385 1390ac08d1fb7b4d54ed736cbc3a84bb 384 Gene3D G3DSA:3.40.50.2000 206 372 1.7E-14 T 11-10-2018 VSVS12_00385 1390ac08d1fb7b4d54ed736cbc3a84bb 384 SUPERFAMILY SSF53756 21 381 8.9E-36 T 11-10-2018 VSVS12_00385 1390ac08d1fb7b4d54ed736cbc3a84bb 384 Gene3D G3DSA:3.40.50.2000 21 205 3.4E-9 T 11-10-2018 VSVS12_03397 c687aeda9550a4f90759e93b2836fbb7 345 SUPERFAMILY SSF111369 182 258 6.54E-10 T 11-10-2018 VSVS12_03397 c687aeda9550a4f90759e93b2836fbb7 345 SUPERFAMILY SSF111369 49 101 2.09E-10 T 11-10-2018 VSVS12_03397 c687aeda9550a4f90759e93b2836fbb7 345 SUPERFAMILY SSF111369 115 171 9.42E-5 T 11-10-2018 VSVS12_03397 c687aeda9550a4f90759e93b2836fbb7 345 Gene3D G3DSA:2.40.30.170 220 344 3.7E-36 T 11-10-2018 VSVS12_03397 c687aeda9550a4f90759e93b2836fbb7 345 Gene3D G3DSA:2.40.50.100 52 83 9.3E-18 T 11-10-2018 VSVS12_03397 c687aeda9550a4f90759e93b2836fbb7 345 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 49 282 4.6E-17 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VSVS12_03397 c687aeda9550a4f90759e93b2836fbb7 345 Gene3D G3DSA:1.10.287.470 84 172 9.3E-18 T 11-10-2018 VSVS12_03397 c687aeda9550a4f90759e93b2836fbb7 345 Pfam PF00529 HlyD membrane-fusion protein of T1SS 31 335 2.1E-8 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VSVS12_00810 a6cba4aef399a007c14ae792fab43561 171 SUPERFAMILY SSF47144 78 170 4.45E-23 T 11-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VSVS12_00810 a6cba4aef399a007c14ae792fab43561 171 SUPERFAMILY SSF46565 1 73 8.37E-17 T 11-10-2018 IPR036869 Chaperone J-domain superfamily VSVS12_00810 a6cba4aef399a007c14ae792fab43561 171 Pfam PF00226 DnaJ domain 2 70 2.6E-7 T 11-10-2018 IPR001623 DnaJ domain VSVS12_00810 a6cba4aef399a007c14ae792fab43561 171 Gene3D G3DSA:1.10.287.110 1 79 9.6E-23 T 11-10-2018 IPR036869 Chaperone J-domain superfamily VSVS12_00810 a6cba4aef399a007c14ae792fab43561 171 Gene3D G3DSA:1.20.1280.20 80 171 7.4E-27 T 11-10-2018 IPR036386 HscB, C-terminal domain superfamily GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VSVS12_00810 a6cba4aef399a007c14ae792fab43561 171 SMART SM00271 1 66 3.1E-9 T 11-10-2018 IPR001623 DnaJ domain VSVS12_00810 a6cba4aef399a007c14ae792fab43561 171 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 169 9.4E-40 T 11-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VSVS12_00810 a6cba4aef399a007c14ae792fab43561 171 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 170 25.199 T 11-10-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VSVS12_00810 a6cba4aef399a007c14ae792fab43561 171 Pfam PF07743 HSCB C-terminal oligomerisation domain 87 163 6.0E-18 T 11-10-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 VSVS12_01241 2ffc3211e4bb190091e9066e1b6d7333 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 2.1E-52 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01241 2ffc3211e4bb190091e9066e1b6d7333 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 2.1E-52 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01241 2ffc3211e4bb190091e9066e1b6d7333 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 2.1E-52 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01241 2ffc3211e4bb190091e9066e1b6d7333 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.1E-52 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01241 2ffc3211e4bb190091e9066e1b6d7333 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 2.1E-52 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01241 2ffc3211e4bb190091e9066e1b6d7333 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 2.1E-52 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01241 2ffc3211e4bb190091e9066e1b6d7333 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 216 1.3E-4 T 11-10-2018 VSVS12_01241 2ffc3211e4bb190091e9066e1b6d7333 245 Gene3D G3DSA:3.40.50.720 1 245 3.8E-89 T 11-10-2018 VSVS12_01241 2ffc3211e4bb190091e9066e1b6d7333 245 SUPERFAMILY SSF51735 5 244 2.21E-87 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_01241 2ffc3211e4bb190091e9066e1b6d7333 245 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 9 243 1.1E-100 T 11-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VSVS12_01241 2ffc3211e4bb190091e9066e1b6d7333 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VSVS12_01241 2ffc3211e4bb190091e9066e1b6d7333 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 9.7E-17 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01241 2ffc3211e4bb190091e9066e1b6d7333 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 9.7E-17 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01241 2ffc3211e4bb190091e9066e1b6d7333 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 9.7E-17 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01241 2ffc3211e4bb190091e9066e1b6d7333 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 242 2.2E-67 T 11-10-2018 VSVS12_02878 08e98803d09d62022ae58596180644f4 298 TIGRFAM TIGR03899 TIGR03899: TIGR03899 family protein 37 286 7.5E-106 T 11-10-2018 IPR021254 Protein of unknown function DUF2806 VSVS12_02878 08e98803d09d62022ae58596180644f4 298 Pfam PF10987 Protein of unknown function (DUF2806) 58 276 1.9E-85 T 11-10-2018 IPR021254 Protein of unknown function DUF2806 VSVS12_01486 b789c6f2679ef0a9a2a9be216b37b2c6 281 SUPERFAMILY SSF51735 15 265 7.95E-70 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_01486 b789c6f2679ef0a9a2a9be216b37b2c6 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 164 9.1E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01486 b789c6f2679ef0a9a2a9be216b37b2c6 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 18 35 9.1E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01486 b789c6f2679ef0a9a2a9be216b37b2c6 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 193 9.1E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01486 b789c6f2679ef0a9a2a9be216b37b2c6 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 195 212 9.1E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01486 b789c6f2679ef0a9a2a9be216b37b2c6 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 98 109 9.1E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01486 b789c6f2679ef0a9a2a9be216b37b2c6 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 229 249 9.1E-39 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01486 b789c6f2679ef0a9a2a9be216b37b2c6 281 Gene3D G3DSA:3.40.50.720 1 280 4.1E-68 T 11-10-2018 VSVS12_01486 b789c6f2679ef0a9a2a9be216b37b2c6 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 162 7.1E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01486 b789c6f2679ef0a9a2a9be216b37b2c6 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 174 193 7.1E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01486 b789c6f2679ef0a9a2a9be216b37b2c6 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 98 109 7.1E-9 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01486 b789c6f2679ef0a9a2a9be216b37b2c6 281 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 161 189 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VSVS12_01486 b789c6f2679ef0a9a2a9be216b37b2c6 281 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 25 265 6.1E-53 T 11-10-2018 VSVS12_02564 d78c2474b83bf853be634d9abf249cc7 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 2.4E-156 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VSVS12_02564 d78c2474b83bf853be634d9abf249cc7 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 9.3E-6 T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VSVS12_02564 d78c2474b83bf853be634d9abf249cc7 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.397 T 11-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VSVS12_02564 d78c2474b83bf853be634d9abf249cc7 360 Pfam PF00953 Glycosyl transferase family 4 99 283 3.3E-36 T 11-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 VSVS12_02564 d78c2474b83bf853be634d9abf249cc7 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VSVS12_02564 d78c2474b83bf853be634d9abf249cc7 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 11-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VSVS12_00700 e2c2b2f9cf2f22eb1aaddceaaafd3635 470 SUPERFAMILY SSF53738 2 187 2.16E-39 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VSVS12_00700 e2c2b2f9cf2f22eb1aaddceaaafd3635 470 SUPERFAMILY SSF53738 250 379 1.96E-29 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VSVS12_00700 e2c2b2f9cf2f22eb1aaddceaaafd3635 470 SUPERFAMILY SSF55957 374 458 1.96E-17 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VSVS12_00700 e2c2b2f9cf2f22eb1aaddceaaafd3635 470 Gene3D G3DSA:3.40.120.10 263 369 3.2E-58 T 11-10-2018 VSVS12_00700 e2c2b2f9cf2f22eb1aaddceaaafd3635 470 Gene3D G3DSA:3.40.120.10 171 365 3.2E-58 T 11-10-2018 VSVS12_00700 e2c2b2f9cf2f22eb1aaddceaaafd3635 470 Gene3D G3DSA:3.40.120.10 1 170 7.1E-46 T 11-10-2018 VSVS12_00700 e2c2b2f9cf2f22eb1aaddceaaafd3635 470 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 417 466 8.3E-10 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VSVS12_00700 e2c2b2f9cf2f22eb1aaddceaaafd3635 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 94 108 2.1E-11 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VSVS12_00700 e2c2b2f9cf2f22eb1aaddceaaafd3635 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 214 227 2.1E-11 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VSVS12_00700 e2c2b2f9cf2f22eb1aaddceaaafd3635 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 242 257 2.1E-11 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VSVS12_00700 e2c2b2f9cf2f22eb1aaddceaaafd3635 470 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 180 199 2.1E-11 T 11-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VSVS12_00700 e2c2b2f9cf2f22eb1aaddceaaafd3635 470 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 2 136 7.4E-35 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VSVS12_00700 e2c2b2f9cf2f22eb1aaddceaaafd3635 470 Gene3D G3DSA:3.30.310.50 370 470 2.0E-15 T 11-10-2018 VSVS12_00700 e2c2b2f9cf2f22eb1aaddceaaafd3635 470 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 267 378 6.2E-25 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VSVS12_00700 e2c2b2f9cf2f22eb1aaddceaaafd3635 470 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 162 262 3.2E-24 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VSVS12_03482 3690337d8075b5798537e38d62903815 296 SUPERFAMILY SSF46785 2 85 3.92E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_03482 3690337d8075b5798537e38d62903815 296 Pfam PF03466 LysR substrate binding domain 124 293 5.4E-17 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_03482 3690337d8075b5798537e38d62903815 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 1.8E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_03482 3690337d8075b5798537e38d62903815 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 1.8E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_03482 3690337d8075b5798537e38d62903815 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 1.8E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_03482 3690337d8075b5798537e38d62903815 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 6.4E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_03482 3690337d8075b5798537e38d62903815 296 Gene3D G3DSA:1.10.10.10 1 87 6.5E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_03482 3690337d8075b5798537e38d62903815 296 SUPERFAMILY SSF53850 94 295 1.1E-29 T 11-10-2018 VSVS12_03482 3690337d8075b5798537e38d62903815 296 Gene3D G3DSA:3.40.190.10 94 291 1.3E-39 T 11-10-2018 VSVS12_03482 3690337d8075b5798537e38d62903815 296 Gene3D G3DSA:3.40.190.10 169 267 1.3E-39 T 11-10-2018 VSVS12_03436 07e324c541c858127c186450b66bed22 586 Pfam PF00990 Diguanylate cyclase, GGDEF domain 432 580 2.9E-28 T 11-10-2018 IPR000160 GGDEF domain VSVS12_03436 07e324c541c858127c186450b66bed22 586 SUPERFAMILY SSF55073 434 583 5.1E-31 T 11-10-2018 IPR029787 Nucleotide cyclase VSVS12_03436 07e324c541c858127c186450b66bed22 586 Gene3D G3DSA:3.30.450.20 157 263 4.0E-7 T 11-10-2018 VSVS12_03436 07e324c541c858127c186450b66bed22 586 Gene3D G3DSA:3.30.70.270 424 585 4.8E-34 T 11-10-2018 VSVS12_03436 07e324c541c858127c186450b66bed22 586 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 430 584 1.8E-26 T 11-10-2018 IPR000160 GGDEF domain VSVS12_03436 07e324c541c858127c186450b66bed22 586 SMART SM00267 417 584 2.1E-21 T 11-10-2018 IPR000160 GGDEF domain VSVS12_03436 07e324c541c858127c186450b66bed22 586 SUPERFAMILY SSF55781 283 427 7.85E-5 T 11-10-2018 VSVS12_02771 dd76624526e869de4307ea6fbf59183b 184 Gene3D G3DSA:2.30.30.240 103 184 1.4E-30 T 11-10-2018 VSVS12_02771 dd76624526e869de4307ea6fbf59183b 184 Pfam PF05239 PRC-barrel domain 105 170 1.7E-11 T 11-10-2018 IPR027275 PRC-barrel domain VSVS12_02771 dd76624526e869de4307ea6fbf59183b 184 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 16 184 5.5E-55 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 VSVS12_02771 dd76624526e869de4307ea6fbf59183b 184 Pfam PF01782 RimM N-terminal domain 18 97 6.6E-26 T 11-10-2018 IPR002676 RimM, N-terminal GO:0006364 VSVS12_02771 dd76624526e869de4307ea6fbf59183b 184 Gene3D G3DSA:2.40.30.60 6 102 1.4E-32 T 11-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 VSVS12_02771 dd76624526e869de4307ea6fbf59183b 184 SUPERFAMILY SSF50447 15 102 2.26E-24 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VSVS12_02771 dd76624526e869de4307ea6fbf59183b 184 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 15 184 23.842 T 11-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 VSVS12_02771 dd76624526e869de4307ea6fbf59183b 184 SUPERFAMILY SSF50346 108 184 4.51E-20 T 11-10-2018 IPR011033 PRC-barrel-like superfamily VSVS12_00062 8659692cebfc3a5c7b7ee842691e3ab2 614 SUPERFAMILY SSF50475 3 322 3.53E-120 T 11-10-2018 VSVS12_00062 8659692cebfc3a5c7b7ee842691e3ab2 614 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 454 2.9E-161 T 11-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 VSVS12_00062 8659692cebfc3a5c7b7ee842691e3ab2 614 SUPERFAMILY SSF143968 476 614 8.63E-35 T 11-10-2018 VSVS12_00062 8659692cebfc3a5c7b7ee842691e3ab2 614 Gene3D G3DSA:1.20.5.570 587 614 1.9E-10 T 11-10-2018 VSVS12_00062 8659692cebfc3a5c7b7ee842691e3ab2 614 SUPERFAMILY SSF143968 323 459 4.05E-51 T 11-10-2018 VSVS12_00062 8659692cebfc3a5c7b7ee842691e3ab2 614 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 431 2.0E-159 T 11-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 VSVS12_00062 8659692cebfc3a5c7b7ee842691e3ab2 614 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 477 564 3.2E-22 T 11-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 VSVS12_00062 8659692cebfc3a5c7b7ee842691e3ab2 614 Gene3D G3DSA:3.40.1670.10 337 453 4.0E-43 T 11-10-2018 VSVS12_00062 8659692cebfc3a5c7b7ee842691e3ab2 614 Gene3D G3DSA:3.40.1670.10 478 586 1.1E-27 T 11-10-2018 VSVS12_00131 bac36459a8182fcb458a65b70d301472 301 Pfam PF00892 EamA-like transporter family 9 141 2.2E-17 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VSVS12_00131 bac36459a8182fcb458a65b70d301472 301 Pfam PF00892 EamA-like transporter family 155 286 6.7E-17 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VSVS12_00131 bac36459a8182fcb458a65b70d301472 301 SUPERFAMILY SSF103481 189 289 1.57E-10 T 11-10-2018 VSVS12_00131 bac36459a8182fcb458a65b70d301472 301 SUPERFAMILY SSF103481 42 144 1.31E-12 T 11-10-2018 VSVS12_01560 7e0a982a5fbf8532c6e9d27b8280272a 1049 SUPERFAMILY SSF82693 137 328 1.8E-22 T 11-10-2018 VSVS12_01560 7e0a982a5fbf8532c6e9d27b8280272a 1049 Gene3D G3DSA:3.30.70.1430 560 662 9.9E-273 T 11-10-2018 VSVS12_01560 7e0a982a5fbf8532c6e9d27b8280272a 1049 Gene3D G3DSA:3.30.70.1430 42 810 9.9E-273 T 11-10-2018 VSVS12_01560 7e0a982a5fbf8532c6e9d27b8280272a 1049 Gene3D G3DSA:1.20.1640.10 12 508 9.9E-273 T 11-10-2018 VSVS12_01560 7e0a982a5fbf8532c6e9d27b8280272a 1049 Gene3D G3DSA:3.30.2090.10 714 802 9.9E-273 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VSVS12_01560 7e0a982a5fbf8532c6e9d27b8280272a 1049 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 3.9E-31 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_01560 7e0a982a5fbf8532c6e9d27b8280272a 1049 PRINTS PR00702 Acriflavin resistance protein family signature 545 562 3.9E-31 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_01560 7e0a982a5fbf8532c6e9d27b8280272a 1049 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 3.9E-31 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_01560 7e0a982a5fbf8532c6e9d27b8280272a 1049 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 3.9E-31 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_01560 7e0a982a5fbf8532c6e9d27b8280272a 1049 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 3.9E-31 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_01560 7e0a982a5fbf8532c6e9d27b8280272a 1049 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 3.9E-31 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_01560 7e0a982a5fbf8532c6e9d27b8280272a 1049 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 3.9E-31 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_01560 7e0a982a5fbf8532c6e9d27b8280272a 1049 Gene3D G3DSA:3.30.2090.10 181 272 9.9E-273 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VSVS12_01560 7e0a982a5fbf8532c6e9d27b8280272a 1049 Gene3D G3DSA:3.30.70.1320 135 330 9.9E-273 T 11-10-2018 VSVS12_01560 7e0a982a5fbf8532c6e9d27b8280272a 1049 SUPERFAMILY SSF82866 798 1035 1.96E-49 T 11-10-2018 VSVS12_01560 7e0a982a5fbf8532c6e9d27b8280272a 1049 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1043 0.0 T 11-10-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 VSVS12_01560 7e0a982a5fbf8532c6e9d27b8280272a 1049 Pfam PF00873 AcrB/AcrD/AcrF family 5 1032 3.5E-245 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_01560 7e0a982a5fbf8532c6e9d27b8280272a 1049 Gene3D G3DSA:3.30.70.1440 663 860 9.9E-273 T 11-10-2018 VSVS12_01560 7e0a982a5fbf8532c6e9d27b8280272a 1049 SUPERFAMILY SSF82714 185 269 5.1E-17 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VSVS12_01560 7e0a982a5fbf8532c6e9d27b8280272a 1049 Gene3D G3DSA:1.20.1640.10 509 1030 9.9E-273 T 11-10-2018 VSVS12_01560 7e0a982a5fbf8532c6e9d27b8280272a 1049 SUPERFAMILY SSF82714 716 800 1.31E-17 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VSVS12_01560 7e0a982a5fbf8532c6e9d27b8280272a 1049 SUPERFAMILY SSF82866 294 499 2.62E-41 T 11-10-2018 VSVS12_01560 7e0a982a5fbf8532c6e9d27b8280272a 1049 SUPERFAMILY SSF82693 46 127 4.45E-20 T 11-10-2018 VSVS12_02360 dbf36cc6e57845f776109576dc11db90 187 Pfam PF13302 Acetyltransferase (GNAT) domain 7 139 8.8E-19 T 11-10-2018 IPR000182 GNAT domain VSVS12_02360 dbf36cc6e57845f776109576dc11db90 187 Gene3D G3DSA:3.40.630.30 1 155 2.5E-25 T 11-10-2018 VSVS12_02360 dbf36cc6e57845f776109576dc11db90 187 SUPERFAMILY SSF55729 2 152 7.7E-25 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_02563 7d4800a886cdaf1850525f9e8c091c90 440 Pfam PF08245 Mur ligase middle domain 115 282 2.5E-28 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VSVS12_02563 7d4800a886cdaf1850525f9e8c091c90 440 Gene3D G3DSA:3.40.1190.10 99 302 2.8E-65 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VSVS12_02563 7d4800a886cdaf1850525f9e8c091c90 440 Gene3D G3DSA:3.90.190.20 303 436 3.0E-40 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VSVS12_02563 7d4800a886cdaf1850525f9e8c091c90 440 SUPERFAMILY SSF53623 100 300 1.83E-51 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VSVS12_02563 7d4800a886cdaf1850525f9e8c091c90 440 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 10 439 32.899 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VSVS12_02563 7d4800a886cdaf1850525f9e8c091c90 440 SUPERFAMILY SSF53244 302 439 4.58E-43 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VSVS12_02563 7d4800a886cdaf1850525f9e8c091c90 440 Gene3D G3DSA:3.40.50.720 5 98 1.2E-20 T 11-10-2018 VSVS12_02563 7d4800a886cdaf1850525f9e8c091c90 440 SUPERFAMILY SSF51984 11 99 4.45E-18 T 11-10-2018 VSVS12_02563 7d4800a886cdaf1850525f9e8c091c90 440 Pfam PF02875 Mur ligase family, glutamate ligase domain 305 375 1.2E-7 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VSVS12_02563 7d4800a886cdaf1850525f9e8c091c90 440 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 11 437 4.2E-129 T 11-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VSVS12_03410 efcc5bab90938563760f188f0f8c143a 408 Pfam PF03616 Sodium/glutamate symporter 9 376 4.7E-150 T 11-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 VSVS12_03410 efcc5bab90938563760f188f0f8c143a 408 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 5 407 23.652 T 11-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 VSVS12_03410 efcc5bab90938563760f188f0f8c143a 408 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 11 406 5.8E-137 T 11-10-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 VSVS12_00142 bd53d6845228513d71b32f036c987833 534 Pfam PF06527 TniQ 4 150 7.5E-12 T 11-10-2018 IPR009492 TniQ VSVS12_00142 bd53d6845228513d71b32f036c987833 534 Pfam PF15978 Tn7-like transposition protein D 354 514 6.9E-23 T 11-10-2018 IPR032750 Transposon Tn7 transposition protein TnsD, C-termianl VSVS12_02248 514b7d76788e1dacb8c845ee6296b389 366 SMART SM00260 218 352 0.0018 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VSVS12_02248 514b7d76788e1dacb8c845ee6296b389 366 SUPERFAMILY SSF50341 218 354 1.16E-12 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VSVS12_02248 514b7d76788e1dacb8c845ee6296b389 366 Pfam PF01584 CheW-like domain 222 354 8.9E-13 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VSVS12_02248 514b7d76788e1dacb8c845ee6296b389 366 PIRSF PIRSF020479 5 366 8.3E-116 T 11-10-2018 IPR014506 Uncharacterised conserved protein UCP020479, signal transduction CheW-like VSVS12_01411 3f624547efd05aff79bcdfc22037412b 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 6.0E-98 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VSVS12_01411 3f624547efd05aff79bcdfc22037412b 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 11-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VSVS12_01411 3f624547efd05aff79bcdfc22037412b 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 37.964 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VSVS12_01411 3f624547efd05aff79bcdfc22037412b 268 SUPERFAMILY SSF51366 1 266 9.42E-91 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VSVS12_01411 3f624547efd05aff79bcdfc22037412b 268 Gene3D G3DSA:3.20.20.70 1 268 1.0E-94 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_01411 3f624547efd05aff79bcdfc22037412b 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 4.2E-103 T 11-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VSVS12_01805 24ee82b3afd18b94a139e5cd47a283df 702 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 61 702 1.7E-86 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 VSVS12_01805 24ee82b3afd18b94a139e5cd47a283df 702 Gene3D G3DSA:2.40.170.20 167 702 5.0E-104 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VSVS12_01805 24ee82b3afd18b94a139e5cd47a283df 702 Pfam PF07715 TonB-dependent Receptor Plug Domain 60 156 8.4E-17 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain VSVS12_01805 24ee82b3afd18b94a139e5cd47a283df 702 SUPERFAMILY SSF56935 22 702 1.43E-112 T 11-10-2018 VSVS12_01805 24ee82b3afd18b94a139e5cd47a283df 702 Gene3D G3DSA:2.170.130.10 41 166 2.5E-30 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VSVS12_01805 24ee82b3afd18b94a139e5cd47a283df 702 Pfam PF00593 TonB dependent receptor 244 700 7.5E-47 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VSVS12_00067 8d2ac1b0a4433408f1e6202b77601cb6 496 SUPERFAMILY SSF53067 134 304 6.76E-43 T 11-10-2018 VSVS12_00067 8d2ac1b0a4433408f1e6202b77601cb6 496 SUPERFAMILY SSF109604 309 494 3.77E-40 T 11-10-2018 VSVS12_00067 8d2ac1b0a4433408f1e6202b77601cb6 496 Gene3D G3DSA:1.10.3210.10 306 496 1.9E-47 T 11-10-2018 VSVS12_00067 8d2ac1b0a4433408f1e6202b77601cb6 496 Gene3D G3DSA:3.30.420.40 11 299 3.2E-82 T 11-10-2018 VSVS12_00067 8d2ac1b0a4433408f1e6202b77601cb6 496 SUPERFAMILY SSF53067 9 129 1.38E-35 T 11-10-2018 VSVS12_00067 8d2ac1b0a4433408f1e6202b77601cb6 496 PIRSF PIRSF001267 1 496 1.8E-180 T 11-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 VSVS12_00067 8d2ac1b0a4433408f1e6202b77601cb6 496 Pfam PF02541 Ppx/GppA phosphatase family 23 303 6.1E-88 T 11-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 VSVS12_00067 8d2ac1b0a4433408f1e6202b77601cb6 496 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 4 494 53.018 T 11-10-2018 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40 VSVS12_00067 8d2ac1b0a4433408f1e6202b77601cb6 496 Gene3D G3DSA:3.30.420.150 114 291 3.2E-82 T 11-10-2018 VSVS12_02982 3397289930da4734a60e50b9ce06b449 295 SUPERFAMILY SSF53335 45 273 2.28E-43 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_02982 3397289930da4734a60e50b9ce06b449 295 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 293 6.3E-105 T 11-10-2018 VSVS12_02982 3397289930da4734a60e50b9ce06b449 295 Gene3D G3DSA:3.40.50.150 102 294 1.0E-55 T 11-10-2018 VSVS12_02982 3397289930da4734a60e50b9ce06b449 295 PIRSF PIRSF000401 1 295 1.2E-98 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 VSVS12_02982 3397289930da4734a60e50b9ce06b449 295 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 293 33.441 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 VSVS12_02982 3397289930da4734a60e50b9ce06b449 295 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 287 1.3E-107 T 11-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 VSVS12_01210 be5fc7bd738bce7725ff785cfaf296a4 204 Pfam PF02810 SEC-C motif 186 204 6.0E-9 T 11-10-2018 IPR004027 SEC-C motif VSVS12_01210 be5fc7bd738bce7725ff785cfaf296a4 204 SUPERFAMILY SSF103642 183 203 2.13E-7 T 11-10-2018 VSVS12_01210 be5fc7bd738bce7725ff785cfaf296a4 204 Gene3D G3DSA:3.10.450.50 82 204 3.8E-8 T 11-10-2018 VSVS12_03058 8586cf7a9e3235c4ba1c79986298a034 209 Gene3D G3DSA:1.20.950.20 1 158 1.5E-13 T 11-10-2018 VSVS12_03058 8586cf7a9e3235c4ba1c79986298a034 209 SUPERFAMILY SSF81342 2 172 9.1E-34 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 VSVS12_03058 8586cf7a9e3235c4ba1c79986298a034 209 Pfam PF01292 Prokaryotic cytochrome b561 3 170 5.3E-21 T 11-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 VSVS12_01830 1ca2603b3c282e1741ee2914c1a5f7b6 970 Gene3D G3DSA:3.90.1150.10 34 463 9.3E-131 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VSVS12_01830 1ca2603b3c282e1741ee2914c1a5f7b6 970 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 540 900 3.0E-64 T 11-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 VSVS12_01830 1ca2603b3c282e1741ee2914c1a5f7b6 970 Pfam PF00202 Aminotransferase class-III 52 464 1.9E-92 T 11-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 VSVS12_01830 1ca2603b3c282e1741ee2914c1a5f7b6 970 Gene3D G3DSA:3.40.640.10 88 356 9.3E-131 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VSVS12_01830 1ca2603b3c282e1741ee2914c1a5f7b6 970 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 787 808 - T 11-10-2018 IPR021115 Pyridoxal-phosphate binding site GO:0016831 VSVS12_01830 1ca2603b3c282e1741ee2914c1a5f7b6 970 SUPERFAMILY SSF53383 42 465 6.33E-114 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VSVS12_01830 1ca2603b3c282e1741ee2914c1a5f7b6 970 SUPERFAMILY SSF53383 520 966 1.41E-112 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VSVS12_01830 1ca2603b3c282e1741ee2914c1a5f7b6 970 Gene3D G3DSA:3.90.1150.10 569 956 1.1E-133 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VSVS12_01830 1ca2603b3c282e1741ee2914c1a5f7b6 970 Gene3D G3DSA:1.20.1650.10 464 568 2.1E-34 T 11-10-2018 VSVS12_01830 1ca2603b3c282e1741ee2914c1a5f7b6 970 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 35 465 1.8E-155 T 11-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 VSVS12_01830 1ca2603b3c282e1741ee2914c1a5f7b6 970 Gene3D G3DSA:3.40.640.10 583 851 1.1E-133 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VSVS12_03977 0dfb6dd915d7f573db74dd6e5f242df5 251 Pfam PF00005 ABC transporter 18 164 2.5E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_03977 0dfb6dd915d7f573db74dd6e5f242df5 251 SMART SM00382 26 213 3.4E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_03977 0dfb6dd915d7f573db74dd6e5f242df5 251 SUPERFAMILY SSF52540 2 225 1.3E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03977 0dfb6dd915d7f573db74dd6e5f242df5 251 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_03977 0dfb6dd915d7f573db74dd6e5f242df5 251 Gene3D G3DSA:3.40.50.300 1 250 2.4E-63 T 11-10-2018 VSVS12_01655 17b5302861a2ef07dfb80595139f1b54 351 Pfam PF00793 DAHP synthetase I family 44 340 2.3E-98 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VSVS12_01655 17b5302861a2ef07dfb80595139f1b54 351 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 350 1.1E-157 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VSVS12_01655 17b5302861a2ef07dfb80595139f1b54 351 Gene3D G3DSA:3.20.20.70 1 351 4.6E-149 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_01655 17b5302861a2ef07dfb80595139f1b54 351 PIRSF PIRSF001361 2 351 1.9E-152 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VSVS12_01655 17b5302861a2ef07dfb80595139f1b54 351 SUPERFAMILY SSF51569 8 350 1.47E-126 T 11-10-2018 VSVS12_01803 7a551787ca25489612d099670b51c538 453 Pfam PF01618 MotA/TolQ/ExbB proton channel family 307 426 6.7E-31 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VSVS12_01803 7a551787ca25489612d099670b51c538 453 PIRSF PIRSF037714 1 450 3.2E-150 T 11-10-2018 IPR017270 Putative MotA/TolQ/ExbB family protein VSVS12_01650 8103b777515390ff0eb1a96c03d0ed86 365 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 173 357 3.8E-23 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VSVS12_01650 8103b777515390ff0eb1a96c03d0ed86 365 SUPERFAMILY SSF161098 154 346 1.1E-41 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_01650 8103b777515390ff0eb1a96c03d0ed86 365 Gene3D G3DSA:1.10.3720.10 147 363 4.8E-49 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_01650 8103b777515390ff0eb1a96c03d0ed86 365 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 155 251 1.6E-22 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VSVS12_02406 638f4755f4f29c727ebd4ce5b63c732a 174 Pfam PF07963 Prokaryotic N-terminal methylation motif 18 41 2.4E-6 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_02406 638f4755f4f29c727ebd4ce5b63c732a 174 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 20 40 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_02406 638f4755f4f29c727ebd4ce5b63c732a 174 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 20 41 8.5E-4 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_04278 c568781c13e7becd1e3fca31a656b3c3 275 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 16 273 44.864 T 11-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 VSVS12_04278 c568781c13e7becd1e3fca31a656b3c3 275 Gene3D G3DSA:3.40.50.620 1 275 2.5E-78 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VSVS12_04278 c568781c13e7becd1e3fca31a656b3c3 275 Pfam PF02540 NAD synthase 21 269 2.2E-62 T 11-10-2018 IPR022310 NAD/GMP synthase VSVS12_04278 c568781c13e7becd1e3fca31a656b3c3 275 SUPERFAMILY SSF52402 2 275 3.96E-78 T 11-10-2018 VSVS12_04278 c568781c13e7becd1e3fca31a656b3c3 275 TIGRFAM TIGR00552 nadE: NAD+ synthetase 21 271 9.1E-64 T 11-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 VSVS12_00821 e50d5227ed5c5ff5edf36553f1976e5b 194 Gene3D G3DSA:1.10.10.10 127 194 2.8E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_00821 e50d5227ed5c5ff5edf36553f1976e5b 194 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 33 187 7.1E-26 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VSVS12_00821 e50d5227ed5c5ff5edf36553f1976e5b 194 Gene3D G3DSA:1.10.1740.10 13 96 1.1E-22 T 11-10-2018 VSVS12_00821 e50d5227ed5c5ff5edf36553f1976e5b 194 Pfam PF04542 Sigma-70 region 2 35 99 1.7E-15 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VSVS12_00821 e50d5227ed5c5ff5edf36553f1976e5b 194 SUPERFAMILY SSF88946 8 118 1.31E-24 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VSVS12_00821 e50d5227ed5c5ff5edf36553f1976e5b 194 SUPERFAMILY SSF88659 127 189 2.43E-14 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VSVS12_00821 e50d5227ed5c5ff5edf36553f1976e5b 194 Pfam PF04545 Sigma-70, region 4 139 187 1.3E-13 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 VSVS12_02677 d0622197b5b58c57abc887322650e633 264 Pfam PF04784 Protein of unknown function, DUF547 92 203 1.9E-23 T 11-10-2018 IPR006869 Domain of unknown function DUF547 VSVS12_00831 42f5fe79cf06232782e31af306f8334a 210 Pfam PF02508 Rnf-Nqr subunit, membrane protein 8 195 5.8E-62 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VSVS12_00831 42f5fe79cf06232782e31af306f8334a 210 Hamap MF_00428 Na(+)-translocating NADH-quinone reductase subunit D [nqrD]. 2 207 36.874 T 11-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 VSVS12_00831 42f5fe79cf06232782e31af306f8334a 210 TIGRFAM TIGR01939 nqrD: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit 4 207 9.2E-107 T 11-10-2018 IPR011292 Na(+)-translocating NADH-quinone reductase subunit D GO:0016655|GO:0055114 VSVS12_00831 42f5fe79cf06232782e31af306f8334a 210 PIRSF PIRSF006102 3 210 1.4E-70 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VSVS12_02769 9f93ba0d5fb434c5ef443265982b6003 117 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 1.6E-51 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02769 9f93ba0d5fb434c5ef443265982b6003 117 SUPERFAMILY SSF50104 2 115 6.82E-47 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily VSVS12_02769 9f93ba0d5fb434c5ef443265982b6003 117 Gene3D G3DSA:2.30.30.790 3 117 2.9E-17 T 11-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02769 9f93ba0d5fb434c5ef443265982b6003 117 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 11-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_02769 9f93ba0d5fb434c5ef443265982b6003 117 PIRSF PIRSF002191 1 117 1.7E-50 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02769 9f93ba0d5fb434c5ef443265982b6003 117 Pfam PF01245 Ribosomal protein L19 3 113 1.4E-49 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02769 9f93ba0d5fb434c5ef443265982b6003 117 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 31.222 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02769 9f93ba0d5fb434c5ef443265982b6003 117 PRINTS PR00061 Ribosomal protein L19 signature 88 113 1.3E-40 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02769 9f93ba0d5fb434c5ef443265982b6003 117 PRINTS PR00061 Ribosomal protein L19 signature 34 63 1.3E-40 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02769 9f93ba0d5fb434c5ef443265982b6003 117 PRINTS PR00061 Ribosomal protein L19 signature 4 33 1.3E-40 T 11-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_01500 f5872283389e0f9ea26f666025b87867 261 Gene3D G3DSA:3.40.50.150 27 229 3.5E-35 T 11-10-2018 VSVS12_01500 f5872283389e0f9ea26f666025b87867 261 Pfam PF13649 Methyltransferase domain 59 149 2.4E-10 T 11-10-2018 VSVS12_01500 f5872283389e0f9ea26f666025b87867 261 Gene3D G3DSA:2.20.130.10 161 220 3.5E-35 T 11-10-2018 VSVS12_01500 f5872283389e0f9ea26f666025b87867 261 SUPERFAMILY SSF53335 20 260 1.59E-36 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_00632 a3c58ac3cf3925ce2cf70b18e73348e8 323 Pfam PF00348 Polyprenyl synthetase 32 268 1.3E-74 T 11-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 VSVS12_00632 a3c58ac3cf3925ce2cf70b18e73348e8 323 Gene3D G3DSA:1.10.600.10 1 323 1.1E-121 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily VSVS12_00632 a3c58ac3cf3925ce2cf70b18e73348e8 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site VSVS12_00632 a3c58ac3cf3925ce2cf70b18e73348e8 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 11-10-2018 IPR033749 Polyprenyl synthetase, conserved site VSVS12_00632 a3c58ac3cf3925ce2cf70b18e73348e8 323 SUPERFAMILY SSF48576 4 322 4.14E-100 T 11-10-2018 IPR008949 Isoprenoid synthase domain superfamily VSVS12_00774 01208e570ccde3053995584efdc9e77f 327 Pfam PF01551 Peptidase family M23 168 263 1.6E-30 T 11-10-2018 IPR016047 Peptidase M23 VSVS12_00774 01208e570ccde3053995584efdc9e77f 327 Gene3D G3DSA:2.70.70.10 112 269 1.5E-43 T 11-10-2018 IPR011055 Duplicated hybrid motif VSVS12_00774 01208e570ccde3053995584efdc9e77f 327 SUPERFAMILY SSF51261 84 265 5.36E-53 T 11-10-2018 IPR011055 Duplicated hybrid motif VSVS12_01416 d1bbd43ed657763980519cd0747b6376 529 Pfam PF00425 chorismate binding enzyme 246 506 3.7E-83 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal VSVS12_01416 d1bbd43ed657763980519cd0747b6376 529 Pfam PF04715 Anthranilate synthase component I, N terminal region 25 198 4.4E-14 T 11-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VSVS12_01416 d1bbd43ed657763980519cd0747b6376 529 PRINTS PR00095 Anthranilate synthase component I signature 448 462 1.5E-22 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VSVS12_01416 d1bbd43ed657763980519cd0747b6376 529 PRINTS PR00095 Anthranilate synthase component I signature 463 477 1.5E-22 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VSVS12_01416 d1bbd43ed657763980519cd0747b6376 529 PRINTS PR00095 Anthranilate synthase component I signature 354 367 1.5E-22 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VSVS12_01416 d1bbd43ed657763980519cd0747b6376 529 PRINTS PR00095 Anthranilate synthase component I signature 368 381 1.5E-22 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VSVS12_01416 d1bbd43ed657763980519cd0747b6376 529 PIRSF PIRSF001373 3 525 2.6E-256 T 11-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VSVS12_01416 d1bbd43ed657763980519cd0747b6376 529 Gene3D G3DSA:3.60.120.10 8 522 1.6E-180 T 11-10-2018 IPR005801 ADC synthase GO:0009058 VSVS12_01416 d1bbd43ed657763980519cd0747b6376 529 SUPERFAMILY SSF56322 15 518 1.14E-156 T 11-10-2018 IPR005801 ADC synthase GO:0009058 VSVS12_01416 d1bbd43ed657763980519cd0747b6376 529 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 22 518 3.3E-225 T 11-10-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VSVS12_01691 5dd8fe69bafbe9af9d91667d72f34fc7 315 Gene3D G3DSA:3.40.50.12370 1 311 3.5E-111 T 11-10-2018 VSVS12_01691 5dd8fe69bafbe9af9d91667d72f34fc7 315 Pfam PF00582 Universal stress protein family 213 301 5.8E-15 T 11-10-2018 IPR006016 UspA VSVS12_01691 5dd8fe69bafbe9af9d91667d72f34fc7 315 Pfam PF00582 Universal stress protein family 4 148 2.2E-12 T 11-10-2018 IPR006016 UspA VSVS12_01691 5dd8fe69bafbe9af9d91667d72f34fc7 315 SUPERFAMILY SSF52402 171 309 1.17E-22 T 11-10-2018 VSVS12_01691 5dd8fe69bafbe9af9d91667d72f34fc7 315 SUPERFAMILY SSF52402 4 158 1.0E-25 T 11-10-2018 VSVS12_00544 d498e4bda960da89226e2f279263b5b4 321 PIRSF PIRSF004692 1 321 3.9E-129 T 11-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 VSVS12_00544 d498e4bda960da89226e2f279263b5b4 321 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 43 311 4.9E-111 T 11-10-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 VSVS12_00544 d498e4bda960da89226e2f279263b5b4 321 Pfam PF01380 SIS domain 38 169 5.1E-30 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VSVS12_00544 d498e4bda960da89226e2f279263b5b4 321 SUPERFAMILY SSF53697 7 316 8.45E-66 T 11-10-2018 VSVS12_00544 d498e4bda960da89226e2f279263b5b4 321 Gene3D G3DSA:3.10.580.10 194 318 1.4E-45 T 11-10-2018 VSVS12_00544 d498e4bda960da89226e2f279263b5b4 321 SMART SM00116 208 256 0.0015 T 11-10-2018 IPR000644 CBS domain VSVS12_00544 d498e4bda960da89226e2f279263b5b4 321 SMART SM00116 273 320 5.1 T 11-10-2018 IPR000644 CBS domain VSVS12_00544 d498e4bda960da89226e2f279263b5b4 321 Gene3D G3DSA:3.40.50.10490 4 193 9.2E-63 T 11-10-2018 VSVS12_00544 d498e4bda960da89226e2f279263b5b4 321 Pfam PF00571 CBS domain 266 318 6.0E-5 T 11-10-2018 IPR000644 CBS domain VSVS12_00544 d498e4bda960da89226e2f279263b5b4 321 Pfam PF00571 CBS domain 200 256 5.3E-6 T 11-10-2018 IPR000644 CBS domain VSVS12_01492 8e794e074bd9b1f7385d4f7860970050 202 Gene3D G3DSA:3.40.630.30 17 197 3.7E-32 T 11-10-2018 VSVS12_01492 8e794e074bd9b1f7385d4f7860970050 202 Pfam PF13302 Acetyltransferase (GNAT) domain 24 168 2.6E-18 T 11-10-2018 IPR000182 GNAT domain VSVS12_01492 8e794e074bd9b1f7385d4f7860970050 202 SUPERFAMILY SSF55729 20 192 5.71E-31 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_00547 f8b1fdcdaf1d9b888e578d5546c76b94 263 Pfam PF02405 Permease MlaE 48 259 1.0E-76 T 11-10-2018 IPR030802 ABC transporter permease MalE GO:0043190 VSVS12_00547 f8b1fdcdaf1d9b888e578d5546c76b94 263 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 8 261 5.3E-99 T 11-10-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria VSVS12_02576 ed0a1c2bf087a2135aa8ab37c573da04 158 PIRSF PIRSF005276 1 158 7.6E-60 T 11-10-2018 IPR007481 Stringent starvation protein B VSVS12_02576 ed0a1c2bf087a2135aa8ab37c573da04 158 SUPERFAMILY SSF101738 1 108 5.23E-47 T 11-10-2018 IPR036760 SspB-like superfamily VSVS12_02576 ed0a1c2bf087a2135aa8ab37c573da04 158 Gene3D G3DSA:2.30.30.220 1 124 6.2E-51 T 11-10-2018 IPR036760 SspB-like superfamily VSVS12_02576 ed0a1c2bf087a2135aa8ab37c573da04 158 Pfam PF04386 Stringent starvation protein B 4 158 3.5E-41 T 11-10-2018 IPR007481 Stringent starvation protein B VSVS12_01605 5242a88975458cf6e071c9280ca35cc2 342 Gene3D G3DSA:1.10.1610.10 13 340 1.3E-125 T 11-10-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 VSVS12_01605 5242a88975458cf6e071c9280ca35cc2 342 Gene3D G3DSA:3.40.50.10210 51 323 1.3E-125 T 11-10-2018 VSVS12_01605 5242a88975458cf6e071c9280ca35cc2 342 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 3 340 1.5E-131 T 11-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 VSVS12_01605 5242a88975458cf6e071c9280ca35cc2 342 SUPERFAMILY SSF52733 2 341 9.29E-112 T 11-10-2018 IPR036087 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like superfamily GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 VSVS12_01605 5242a88975458cf6e071c9280ca35cc2 342 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 1 342 35.701 T 11-10-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 VSVS12_01605 5242a88975458cf6e071c9280ca35cc2 342 Pfam PF02277 Phosphoribosyltransferase 2 340 8.4E-130 T 11-10-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970 VSVS12_02262 4e41c008638b2613570624d7045d2910 143 Gene3D G3DSA:3.30.428.10 1 142 2.6E-42 T 11-10-2018 IPR036265 HIT-like superfamily VSVS12_02262 4e41c008638b2613570624d7045d2910 143 Pfam PF01230 HIT domain 11 99 8.5E-19 T 11-10-2018 IPR001310 Histidine triad (HIT) protein VSVS12_02262 4e41c008638b2613570624d7045d2910 143 PIRSF PIRSF000714 2 140 1.0E-52 T 11-10-2018 IPR026026 Histidine triad hydrolase, Hint-type VSVS12_02262 4e41c008638b2613570624d7045d2910 143 SUPERFAMILY SSF54197 3 133 2.98E-34 T 11-10-2018 IPR036265 HIT-like superfamily VSVS12_01566 01fe950b9beaf955afff57dfa917cba6 376 Pfam PF04209 homogentisate 1,2-dioxygenase 98 373 6.8E-21 T 11-10-2018 IPR005708 Homogentisate 1,2-dioxygenase GO:0004411|GO:0006559|GO:0006570|GO:0055114 KEGG: 00350+1.13.11.5|KEGG: 00643+1.13.11.5|Reactome: R-HSA-71182 VSVS12_01566 01fe950b9beaf955afff57dfa917cba6 376 SUPERFAMILY SSF51182 60 374 5.29E-86 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily VSVS12_01566 01fe950b9beaf955afff57dfa917cba6 376 Gene3D G3DSA:2.60.120.10 66 166 4.6E-10 T 11-10-2018 IPR014710 RmlC-like jelly roll fold VSVS12_02807 36f20806c8e7b17cb2ee622bbf469854 233 SUPERFAMILY SSF49354 18 144 2.3E-6 T 11-10-2018 IPR008962 PapD-like superfamily VSVS12_02807 36f20806c8e7b17cb2ee622bbf469854 233 ProDom PD115044 PRECURSOR SIGNAL 3'REGION PLASMID CS5 50 205 6.0E-4 T 11-10-2018 VSVS12_01608 d9bf7c620dc606ff7da99043a34d7930 208 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 189 8.5E-31 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 VSVS12_01608 d9bf7c620dc606ff7da99043a34d7930 208 SMART SM00855 5 155 7.8E-11 T 11-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 VSVS12_01608 d9bf7c620dc606ff7da99043a34d7930 208 SUPERFAMILY SSF53254 4 199 6.0E-35 T 11-10-2018 IPR029033 Histidine phosphatase superfamily VSVS12_01608 d9bf7c620dc606ff7da99043a34d7930 208 Gene3D G3DSA:3.40.50.1240 1 207 1.4E-48 T 11-10-2018 IPR029033 Histidine phosphatase superfamily VSVS12_03054 b0bfdf2ab0ab570199ee558813b0b4a4 137 SUPERFAMILY SSF75620 8 111 3.06E-11 T 11-10-2018 VSVS12_03054 b0bfdf2ab0ab570199ee558813b0b4a4 137 Pfam PF00472 RF-1 domain 7 132 1.9E-23 T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VSVS12_03054 b0bfdf2ab0ab570199ee558813b0b4a4 137 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 11-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 VSVS12_03054 b0bfdf2ab0ab570199ee558813b0b4a4 137 Gene3D G3DSA:3.30.160.20 1 137 1.2E-37 T 11-10-2018 VSVS12_02628 20a736716d263ad75d3359f0262580fb 476 Pfam PF01467 Cytidylyltransferase-like 345 469 1.6E-14 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VSVS12_02628 20a736716d263ad75d3359f0262580fb 476 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VSVS12_02628 20a736716d263ad75d3359f0262580fb 476 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 42.213 T 11-10-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 VSVS12_02628 20a736716d263ad75d3359f0262580fb 476 Pfam PF00294 pfkB family carbohydrate kinase 13 302 8.1E-46 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB VSVS12_02628 20a736716d263ad75d3359f0262580fb 476 SUPERFAMILY SSF53613 12 304 3.9E-57 T 11-10-2018 IPR029056 Ribokinase-like VSVS12_02628 20a736716d263ad75d3359f0262580fb 476 Gene3D G3DSA:3.40.50.620 323 474 5.7E-37 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VSVS12_02628 20a736716d263ad75d3359f0262580fb 476 Gene3D G3DSA:3.40.1190.20 5 310 4.6E-109 T 11-10-2018 IPR029056 Ribokinase-like VSVS12_02628 20a736716d263ad75d3359f0262580fb 476 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 332 472 2.8E-60 T 11-10-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 VSVS12_02628 20a736716d263ad75d3359f0262580fb 476 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 9.5E-17 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VSVS12_02628 20a736716d263ad75d3359f0262580fb 476 SUPERFAMILY SSF52374 340 471 2.13E-22 T 11-10-2018 VSVS12_02628 20a736716d263ad75d3359f0262580fb 476 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 7 312 3.2E-124 T 11-10-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00540+2.7.7.70+2.7.1.167 VSVS12_02066 0303e91abed5935588f1b646e7308aba 135 PIRSF PIRSF002096 1 135 3.5E-52 T 11-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 VSVS12_02066 0303e91abed5935588f1b646e7308aba 135 SMART SM00528 88 135 1.1E-22 T 11-10-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 VSVS12_02066 0303e91abed5935588f1b646e7308aba 135 Pfam PF00816 H-NS histone family 38 129 3.9E-18 T 11-10-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 VSVS12_02066 0303e91abed5935588f1b646e7308aba 135 Gene3D G3DSA:1.10.287.1050 1 94 6.0E-29 T 11-10-2018 IPR027454 Histone-like protein H-NS, N-terminal GO:0046983 VSVS12_02066 0303e91abed5935588f1b646e7308aba 135 SUPERFAMILY SSF81273 93 135 4.71E-11 T 11-10-2018 VSVS12_02066 0303e91abed5935588f1b646e7308aba 135 SUPERFAMILY SSF81273 2 58 2.35E-16 T 11-10-2018 VSVS12_02066 0303e91abed5935588f1b646e7308aba 135 Gene3D G3DSA:4.10.430.10 95 135 7.3E-23 T 11-10-2018 IPR037150 Histone-like protein H-NS, C-terminal domain superfamily GO:0003677 VSVS12_00630 e81ac4e543cef869238ff4692a69de6a 311 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 310 3.9E-49 T 11-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 VSVS12_00630 e81ac4e543cef869238ff4692a69de6a 311 PIRSF PIRSF000102 1 305 3.0E-61 T 11-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 VSVS12_00630 e81ac4e543cef869238ff4692a69de6a 311 SUPERFAMILY SSF51735 1 145 6.44E-39 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_00630 e81ac4e543cef869238ff4692a69de6a 311 Gene3D G3DSA:3.90.110.10 147 311 3.9E-55 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VSVS12_00630 e81ac4e543cef869238ff4692a69de6a 311 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 2.7E-46 T 11-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 VSVS12_00630 e81ac4e543cef869238ff4692a69de6a 311 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 311 7.2E-130 T 11-10-2018 IPR010097 Malate dehydrogenase, type 1 GO:0006099|GO:0030060 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 VSVS12_00630 e81ac4e543cef869238ff4692a69de6a 311 SUPERFAMILY SSF56327 146 310 6.02E-43 T 11-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 VSVS12_00630 e81ac4e543cef869238ff4692a69de6a 311 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 11-10-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 VSVS12_00630 e81ac4e543cef869238ff4692a69de6a 311 Gene3D G3DSA:3.40.50.720 1 146 3.7E-65 T 11-10-2018 VSVS12_00630 e81ac4e543cef869238ff4692a69de6a 311 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 57.477 T 11-10-2018 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 VSVS12_04488 feb8aa1afa3638dd743957a5a50c85c9 80 Pfam PF06183 DinI-like family 18 75 7.4E-16 T 11-10-2018 IPR010391 DNA damage-inducible protein DinI-like VSVS12_04488 feb8aa1afa3638dd743957a5a50c85c9 80 Gene3D G3DSA:3.30.910.10 1 78 7.4E-19 T 11-10-2018 IPR036687 DinI-like superfamily VSVS12_04488 feb8aa1afa3638dd743957a5a50c85c9 80 SUPERFAMILY SSF54857 1 77 2.75E-18 T 11-10-2018 IPR036687 DinI-like superfamily VSVS12_02600 5ae6f7f850fe34168fdd2e1163b0aad5 239 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 9 239 52.889 T 11-10-2018 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 VSVS12_02600 5ae6f7f850fe34168fdd2e1163b0aad5 239 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 114 120 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VSVS12_02600 5ae6f7f850fe34168fdd2e1163b0aad5 239 Pfam PF05175 Methyltransferase small domain 42 126 1.0E-15 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 VSVS12_02600 5ae6f7f850fe34168fdd2e1163b0aad5 239 Gene3D G3DSA:3.40.50.150 7 235 2.0E-54 T 11-10-2018 VSVS12_02600 5ae6f7f850fe34168fdd2e1163b0aad5 239 SUPERFAMILY SSF53335 30 189 1.23E-28 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_00071 d4010751ff94154b68f90040330e45c5 304 SUPERFAMILY SSF103481 50 148 3.01E-13 T 11-10-2018 VSVS12_00071 d4010751ff94154b68f90040330e45c5 304 SUPERFAMILY SSF103481 191 292 7.06E-8 T 11-10-2018 VSVS12_00071 d4010751ff94154b68f90040330e45c5 304 TIGRFAM TIGR00688 rarD: protein RarD 12 265 3.4E-86 T 11-10-2018 IPR004626 RarD protein GO:0005887 VSVS12_00071 d4010751ff94154b68f90040330e45c5 304 Pfam PF00892 EamA-like transporter family 13 146 1.0E-14 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VSVS12_00394 52c9b1661d84e7fe5e477d402636afc6 645 Gene3D G3DSA:3.40.50.720 143 266 2.8E-30 T 11-10-2018 VSVS12_00394 52c9b1661d84e7fe5e477d402636afc6 645 SUPERFAMILY SSF51735 282 544 9.76E-53 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_00394 52c9b1661d84e7fe5e477d402636afc6 645 Pfam PF02719 Polysaccharide biosynthesis protein 285 582 7.8E-128 T 11-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain VSVS12_00394 52c9b1661d84e7fe5e477d402636afc6 645 Pfam PF13727 CoA-binding domain 69 240 1.3E-9 T 11-10-2018 VSVS12_00394 52c9b1661d84e7fe5e477d402636afc6 645 SUPERFAMILY SSF53335 110 342 5.48E-19 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_00394 52c9b1661d84e7fe5e477d402636afc6 645 Gene3D G3DSA:3.40.50.720 280 618 8.2E-115 T 11-10-2018 VSVS12_02293 8bb4527ba5e17db9202828ea3b8242ba 89 PIRSF PIRSF004669 1 89 2.8E-27 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VSVS12_02293 8bb4527ba5e17db9202828ea3b8242ba 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 6.8E-13 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VSVS12_02293 8bb4527ba5e17db9202828ea3b8242ba 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 6.8E-13 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VSVS12_02293 8bb4527ba5e17db9202828ea3b8242ba 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 6.8E-13 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VSVS12_02293 8bb4527ba5e17db9202828ea3b8242ba 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 1.0E-31 T 11-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 VSVS12_02293 8bb4527ba5e17db9202828ea3b8242ba 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 1.3E-26 T 11-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 VSVS12_00709 7d92e767cd589ead778ab17a14cfd356 560 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 84 106 - T 11-10-2018 IPR023765 Solute-binding protein family 5, conserved site VSVS12_00709 7d92e767cd589ead778ab17a14cfd356 560 Gene3D G3DSA:3.40.190.10 46 543 5.7E-188 T 11-10-2018 VSVS12_00709 7d92e767cd589ead778ab17a14cfd356 560 SUPERFAMILY SSF53850 42 545 5.07E-102 T 11-10-2018 VSVS12_00709 7d92e767cd589ead778ab17a14cfd356 560 Gene3D G3DSA:3.90.76.10 66 172 5.7E-188 T 11-10-2018 VSVS12_00709 7d92e767cd589ead778ab17a14cfd356 560 PIRSF PIRSF002741 4 543 4.5E-64 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VSVS12_00709 7d92e767cd589ead778ab17a14cfd356 560 Gene3D G3DSA:3.10.105.10 272 519 5.7E-188 T 11-10-2018 VSVS12_00709 7d92e767cd589ead778ab17a14cfd356 560 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 455 2.2E-72 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain VSVS12_03921 8254e4d564744176f2e869fe6509f4f6 543 Gene3D G3DSA:3.40.50.300 1 340 1.4E-15 T 11-10-2018 VSVS12_03921 8254e4d564744176f2e869fe6509f4f6 543 SUPERFAMILY SSF52540 1 326 4.23E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03921 8254e4d564744176f2e869fe6509f4f6 543 Pfam PF11398 Protein of unknown function (DUF2813) 1 369 1.6E-143 T 11-10-2018 IPR022602 Protein of unknown function DUF2813 VSVS12_02858 7e8bc675bc40da8b5718e45a6da0d723 335 Gene3D G3DSA:3.40.190.10 131 330 1.5E-117 T 11-10-2018 VSVS12_02858 7e8bc675bc40da8b5718e45a6da0d723 335 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 17 335 2.8E-144 T 11-10-2018 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria GO:0015888|GO:0030288|GO:0030975 VSVS12_02858 7e8bc675bc40da8b5718e45a6da0d723 335 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 25 329 6.3E-142 T 11-10-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030975 VSVS12_02858 7e8bc675bc40da8b5718e45a6da0d723 335 Gene3D G3DSA:3.40.190.10 30 305 1.5E-117 T 11-10-2018 VSVS12_02858 7e8bc675bc40da8b5718e45a6da0d723 335 Pfam PF01547 Bacterial extracellular solute-binding protein 48 280 1.4E-22 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein VSVS12_02858 7e8bc675bc40da8b5718e45a6da0d723 335 SUPERFAMILY SSF53850 28 330 2.32E-66 T 11-10-2018 VSVS12_02954 63a7a65c3bc597d8d83241f03671208c 305 PIRSF PIRSF005355 1 303 1.6E-85 T 11-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 VSVS12_02954 63a7a65c3bc597d8d83241f03671208c 305 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 4 298 20.753 T 11-10-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 VSVS12_02954 63a7a65c3bc597d8d83241f03671208c 305 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 13 296 3.6E-99 T 11-10-2018 VSVS12_02954 63a7a65c3bc597d8d83241f03671208c 305 Pfam PF01040 UbiA prenyltransferase family 21 279 2.4E-41 T 11-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 VSVS12_01647 9c301f66add04dd1d4627a3f9ac9fd4e 222 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 20 216 3.2E-43 T 11-10-2018 IPR006214 Bax inhibitor 1-related VSVS12_03578 2d6cfef65331d656016040554d916f57 292 SUPERFAMILY SSF46785 1 84 1.74E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_03578 2d6cfef65331d656016040554d916f57 292 SUPERFAMILY SSF53850 94 287 1.3E-21 T 11-10-2018 VSVS12_03578 2d6cfef65331d656016040554d916f57 292 Pfam PF03466 LysR substrate binding domain 100 254 6.7E-14 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_03578 2d6cfef65331d656016040554d916f57 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 8.0E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_03578 2d6cfef65331d656016040554d916f57 292 Gene3D G3DSA:1.10.10.10 1 87 4.1E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_03578 2d6cfef65331d656016040554d916f57 292 Gene3D G3DSA:3.40.190.290 93 283 8.3E-34 T 11-10-2018 VSVS12_01900 c18c5bafe164282462c58aa60a85b454 202 ProSitePatterns PS01293 Nudix CoA signature. 57 77 - T 11-10-2018 IPR000059 NUDIX hydrolase, NudL, conserved site GO:0000287|GO:0009132|GO:0016818|GO:0030145 Reactome: R-HSA-390918|Reactome: R-HSA-9033241 VSVS12_01900 c18c5bafe164282462c58aa60a85b454 202 Pfam PF00293 NUDIX domain 40 151 1.1E-11 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VSVS12_01900 c18c5bafe164282462c58aa60a85b454 202 Gene3D G3DSA:3.90.79.10 12 197 3.3E-48 T 11-10-2018 VSVS12_01900 c18c5bafe164282462c58aa60a85b454 202 SUPERFAMILY SSF55811 35 192 6.5E-33 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VSVS12_01103 5f361d20a7940600645dc080fd68d279 307 SUPERFAMILY SSF46785 1 86 2.45E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_01103 5f361d20a7940600645dc080fd68d279 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.6E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_01103 5f361d20a7940600645dc080fd68d279 307 Pfam PF03466 LysR substrate binding domain 91 286 1.3E-23 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_01103 5f361d20a7940600645dc080fd68d279 307 SUPERFAMILY SSF53850 91 291 2.17E-24 T 11-10-2018 VSVS12_01103 5f361d20a7940600645dc080fd68d279 307 Gene3D G3DSA:1.10.10.10 1 91 8.2E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_01103 5f361d20a7940600645dc080fd68d279 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.2E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_01103 5f361d20a7940600645dc080fd68d279 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.2E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_01103 5f361d20a7940600645dc080fd68d279 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.2E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_01103 5f361d20a7940600645dc080fd68d279 307 Gene3D G3DSA:3.40.190.290 92 292 4.4E-20 T 11-10-2018 VSVS12_01625 661f68b441c3afec9d0b4e533aa980ab 313 Gene3D G3DSA:3.40.50.880 1 301 9.1E-124 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like VSVS12_01625 661f68b441c3afec9d0b4e533aa980ab 313 PIRSF PIRSF000450 1 309 2.5E-149 T 11-10-2018 IPR033752 MetA family VSVS12_01625 661f68b441c3afec9d0b4e533aa980ab 313 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 3.0E-121 T 11-10-2018 VSVS12_01625 661f68b441c3afec9d0b4e533aa980ab 313 Pfam PF04204 Homoserine O-succinyltransferase 2 299 2.9E-136 T 11-10-2018 IPR033752 MetA family VSVS12_01625 661f68b441c3afec9d0b4e533aa980ab 313 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 299 41.02 T 11-10-2018 IPR033752 MetA family VSVS12_01625 661f68b441c3afec9d0b4e533aa980ab 313 SUPERFAMILY SSF52317 17 297 4.58E-102 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like VSVS12_01625 661f68b441c3afec9d0b4e533aa980ab 313 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 302 1.0E-162 T 11-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 VSVS12_01713 e2abc92c0de3d5abfb1fe6c89226b29a 629 SUPERFAMILY SSF58104 320 629 3.14E-70 T 11-10-2018 VSVS12_01713 e2abc92c0de3d5abfb1fe6c89226b29a 629 SMART SM00283 367 628 1.1E-59 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_01713 e2abc92c0de3d5abfb1fe6c89226b29a 629 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 465 492 2.3E-20 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VSVS12_01713 e2abc92c0de3d5abfb1fe6c89226b29a 629 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 150 165 2.3E-20 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VSVS12_01713 e2abc92c0de3d5abfb1fe6c89226b29a 629 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 494 523 2.3E-20 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VSVS12_01713 e2abc92c0de3d5abfb1fe6c89226b29a 629 SMART SM00304 298 352 6.0E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_01713 e2abc92c0de3d5abfb1fe6c89226b29a 629 Gene3D G3DSA:1.10.287.950 298 629 2.0E-66 T 11-10-2018 VSVS12_01713 e2abc92c0de3d5abfb1fe6c89226b29a 629 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 428 595 3.7E-39 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_01713 e2abc92c0de3d5abfb1fe6c89226b29a 629 Pfam PF00672 HAMP domain 298 348 5.5E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_02254 673448a449a8f8cd9498d3426ae1c9e7 244 PIRSF PIRSF000770 4 243 1.0E-37 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VSVS12_02254 673448a449a8f8cd9498d3426ae1c9e7 244 Pfam PF04542 Sigma-70 region 2 20 91 8.7E-16 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VSVS12_02254 673448a449a8f8cd9498d3426ae1c9e7 244 SUPERFAMILY SSF88659 92 157 3.4E-14 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VSVS12_02254 673448a449a8f8cd9498d3426ae1c9e7 244 PRINTS PR00046 Major sigma-70 factor signature 207 222 5.6E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VSVS12_02254 673448a449a8f8cd9498d3426ae1c9e7 244 PRINTS PR00046 Major sigma-70 factor signature 222 233 5.6E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VSVS12_02254 673448a449a8f8cd9498d3426ae1c9e7 244 PRINTS PR00046 Major sigma-70 factor signature 46 59 5.6E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VSVS12_02254 673448a449a8f8cd9498d3426ae1c9e7 244 PRINTS PR00046 Major sigma-70 factor signature 190 202 5.6E-12 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VSVS12_02254 673448a449a8f8cd9498d3426ae1c9e7 244 Pfam PF04539 Sigma-70 region 3 101 159 1.5E-9 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 VSVS12_02254 673448a449a8f8cd9498d3426ae1c9e7 244 Pfam PF04545 Sigma-70, region 4 187 234 2.2E-17 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 VSVS12_02254 673448a449a8f8cd9498d3426ae1c9e7 244 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 237 6.0E-32 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VSVS12_02254 673448a449a8f8cd9498d3426ae1c9e7 244 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 20 238 1.5E-83 T 11-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VSVS12_02254 673448a449a8f8cd9498d3426ae1c9e7 244 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 7 240 61.227 T 11-10-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 VSVS12_02254 673448a449a8f8cd9498d3426ae1c9e7 244 SUPERFAMILY SSF88659 164 239 2.62E-19 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VSVS12_02254 673448a449a8f8cd9498d3426ae1c9e7 244 Gene3D G3DSA:1.20.140.160 90 239 4.3E-43 T 11-10-2018 VSVS12_02254 673448a449a8f8cd9498d3426ae1c9e7 244 Gene3D G3DSA:1.10.1740.10 4 88 2.1E-27 T 11-10-2018 VSVS12_02254 673448a449a8f8cd9498d3426ae1c9e7 244 SUPERFAMILY SSF88946 6 91 1.07E-23 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VSVS12_04232 b1eaf9a1eceaa363115b3a21854a5b92 139 Gene3D G3DSA:3.40.630.30 35 138 2.8E-21 T 11-10-2018 VSVS12_04232 b1eaf9a1eceaa363115b3a21854a5b92 139 SUPERFAMILY SSF55729 36 137 4.05E-20 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_04232 b1eaf9a1eceaa363115b3a21854a5b92 139 Pfam PF00583 Acetyltransferase (GNAT) family 46 115 1.2E-6 T 11-10-2018 IPR000182 GNAT domain VSVS12_01981 0c0bfa143f166c2d68b392b47b039958 193 Pfam PF03729 Short repeat of unknown function (DUF308) 26 96 1.0E-14 T 11-10-2018 IPR005325 Protein of unknown function DUF308, membrane VSVS12_01981 0c0bfa143f166c2d68b392b47b039958 193 Pfam PF03729 Short repeat of unknown function (DUF308) 86 151 3.0E-9 T 11-10-2018 IPR005325 Protein of unknown function DUF308, membrane VSVS12_02555 4985a9bcbf3698c9a1abdf0153c7f990 154 Pfam PF05258 Protein of unknown function (DUF721) 19 85 3.0E-13 T 11-10-2018 IPR007922 Protein of unknown function DUF721/UPF0232 VSVS12_01757 c21caf0dcd1cd2cba6cbeece1d3cf48d 229 Pfam PF08713 DNA alkylation repair enzyme 9 221 8.1E-63 T 11-10-2018 IPR014825 DNA alkylation repair enzyme VSVS12_01757 c21caf0dcd1cd2cba6cbeece1d3cf48d 229 Gene3D G3DSA:1.25.10.90 1 229 4.9E-79 T 11-10-2018 VSVS12_01757 c21caf0dcd1cd2cba6cbeece1d3cf48d 229 SUPERFAMILY SSF48371 12 223 7.82E-51 T 11-10-2018 IPR016024 Armadillo-type fold VSVS12_00162 5cd36a3cd579c3ac56c4c0167d838c4f 419 Pfam PF02581 Thiamine monophosphate synthase 208 385 1.1E-51 T 11-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VSVS12_00162 5cd36a3cd579c3ac56c4c0167d838c4f 419 Gene3D G3DSA:3.20.20.70 189 405 4.5E-55 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_00162 5cd36a3cd579c3ac56c4c0167d838c4f 419 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 208 396 2.3E-45 T 11-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VSVS12_00162 5cd36a3cd579c3ac56c4c0167d838c4f 419 SUPERFAMILY SSF51391 200 401 2.49E-58 T 11-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 VSVS12_03810 14fe80206273d2cb6e8a34b60d7d4abb 239 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 44 227 1.0E-20 T 11-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VSVS12_03810 14fe80206273d2cb6e8a34b60d7d4abb 239 Pfam PF00929 Exonuclease 51 220 2.1E-13 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VSVS12_03810 14fe80206273d2cb6e8a34b60d7d4abb 239 SMART SM00479 48 229 1.2E-17 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VSVS12_03810 14fe80206273d2cb6e8a34b60d7d4abb 239 Gene3D G3DSA:3.30.420.10 43 228 8.7E-34 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VSVS12_03810 14fe80206273d2cb6e8a34b60d7d4abb 239 SUPERFAMILY SSF53098 39 227 6.51E-37 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_03129 33d0ea1031b51e518656cfa93a83151c 443 SUPERFAMILY SSF81901 238 429 1.92E-51 T 11-10-2018 VSVS12_03129 33d0ea1031b51e518656cfa93a83151c 443 Gene3D G3DSA:1.25.40.10 15 232 5.3E-64 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_03129 33d0ea1031b51e518656cfa93a83151c 443 Gene3D G3DSA:1.25.40.10 350 440 6.7E-25 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_03129 33d0ea1031b51e518656cfa93a83151c 443 Gene3D G3DSA:1.25.40.10 233 349 1.3E-47 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_03129 33d0ea1031b51e518656cfa93a83151c 443 SUPERFAMILY SSF81901 21 235 6.11E-54 T 11-10-2018 VSVS12_03129 33d0ea1031b51e518656cfa93a83151c 443 SMART SM00671 244 279 4.7E-9 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_03129 33d0ea1031b51e518656cfa93a83151c 443 SMART SM00671 388 423 0.0014 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_03129 33d0ea1031b51e518656cfa93a83151c 443 SMART SM00671 280 315 1.8E-11 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_03129 33d0ea1031b51e518656cfa93a83151c 443 SMART SM00671 100 135 8.3E-11 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_03129 33d0ea1031b51e518656cfa93a83151c 443 SMART SM00671 352 387 2.0E-11 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_03129 33d0ea1031b51e518656cfa93a83151c 443 SMART SM00671 172 207 8.7E-8 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_03129 33d0ea1031b51e518656cfa93a83151c 443 SMART SM00671 316 351 7.2E-9 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_03129 33d0ea1031b51e518656cfa93a83151c 443 SMART SM00671 136 171 4.8E-8 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_03129 33d0ea1031b51e518656cfa93a83151c 443 SMART SM00671 28 63 0.04 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_03129 33d0ea1031b51e518656cfa93a83151c 443 SMART SM00671 208 243 3.7E-8 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_03129 33d0ea1031b51e518656cfa93a83151c 443 SMART SM00671 64 99 5.9E-11 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_03129 33d0ea1031b51e518656cfa93a83151c 443 Pfam PF08238 Sel1 repeat 316 351 5.0E-8 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_03129 33d0ea1031b51e518656cfa93a83151c 443 Pfam PF08238 Sel1 repeat 102 135 8.4E-11 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_03129 33d0ea1031b51e518656cfa93a83151c 443 Pfam PF08238 Sel1 repeat 64 99 1.0E-9 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_03129 33d0ea1031b51e518656cfa93a83151c 443 Pfam PF08238 Sel1 repeat 244 279 2.1E-9 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_03129 33d0ea1031b51e518656cfa93a83151c 443 Pfam PF08238 Sel1 repeat 281 315 7.7E-11 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_03129 33d0ea1031b51e518656cfa93a83151c 443 Pfam PF08238 Sel1 repeat 353 387 5.1E-10 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_03129 33d0ea1031b51e518656cfa93a83151c 443 Pfam PF08238 Sel1 repeat 388 423 1.0E-4 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_03129 33d0ea1031b51e518656cfa93a83151c 443 Pfam PF08238 Sel1 repeat 172 207 1.0E-7 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_03129 33d0ea1031b51e518656cfa93a83151c 443 Pfam PF08238 Sel1 repeat 136 171 1.3E-6 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_03129 33d0ea1031b51e518656cfa93a83151c 443 Pfam PF08238 Sel1 repeat 209 243 4.7E-8 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_03129 33d0ea1031b51e518656cfa93a83151c 443 Pfam PF08238 Sel1 repeat 32 63 0.0055 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_03417 737815e4a39307102d49c6e7419da024 175 Pfam PF13302 Acetyltransferase (GNAT) domain 5 139 6.1E-18 T 11-10-2018 IPR000182 GNAT domain VSVS12_03417 737815e4a39307102d49c6e7419da024 175 SUPERFAMILY SSF55729 3 164 5.49E-39 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_03417 737815e4a39307102d49c6e7419da024 175 Gene3D G3DSA:3.40.630.30 4 172 4.8E-49 T 11-10-2018 VSVS12_01831 7c81a5386b9a28114c734c00fa6ad8dc 437 SUPERFAMILY SSF56954 23 431 1.96E-86 T 11-10-2018 VSVS12_01831 7c81a5386b9a28114c734c00fa6ad8dc 437 Pfam PF02321 Outer membrane efflux protein 234 417 1.8E-31 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VSVS12_01831 7c81a5386b9a28114c734c00fa6ad8dc 437 Pfam PF02321 Outer membrane efflux protein 24 213 9.8E-27 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VSVS12_01831 7c81a5386b9a28114c734c00fa6ad8dc 437 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 21 432 1.5E-119 T 11-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 VSVS12_01831 7c81a5386b9a28114c734c00fa6ad8dc 437 Gene3D G3DSA:1.20.1600.10 22 435 1.5E-82 T 11-10-2018 VSVS12_03995 30edbb9a60c0a1540031f6a8fade95d6 110 TIGRFAM TIGR04102 SWIM_PBPRA1643: SWIM/SEC-C metal-binding motif protein, PBPRA1643 family 3 110 6.7E-49 T 11-10-2018 IPR026368 SWIM/SEC-C metal-binding motif protein, PBPRA1643 family VSVS12_03995 30edbb9a60c0a1540031f6a8fade95d6 110 Gene3D G3DSA:3.10.450.50 36 110 1.5E-9 T 11-10-2018 VSVS12_03995 30edbb9a60c0a1540031f6a8fade95d6 110 Pfam PF02810 SEC-C motif 93 110 8.8E-10 T 11-10-2018 IPR004027 SEC-C motif VSVS12_03995 30edbb9a60c0a1540031f6a8fade95d6 110 SUPERFAMILY SSF103642 91 110 1.96E-7 T 11-10-2018 VSVS12_00817 98dcfdcecfde39ed5aa51ae3b44024ed 199 Pfam PF01965 DJ-1/PfpI family 3 169 5.1E-41 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 VSVS12_00817 98dcfdcecfde39ed5aa51ae3b44024ed 199 Gene3D G3DSA:3.40.50.880 1 192 2.3E-51 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like VSVS12_00817 98dcfdcecfde39ed5aa51ae3b44024ed 199 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 4 183 1.2E-62 T 11-10-2018 IPR006287 Protein/nucleic acid deglycase DJ-1 Reactome: R-HSA-3899300 VSVS12_00817 98dcfdcecfde39ed5aa51ae3b44024ed 199 SUPERFAMILY SSF52317 3 190 3.28E-46 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like VSVS12_02077 75b702ec5b7842ac62408c953d16f76c 434 Pfam PF01593 Flavin containing amine oxidoreductase 10 303 2.1E-17 T 11-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 VSVS12_02077 75b702ec5b7842ac62408c953d16f76c 434 SUPERFAMILY SSF51905 1 417 2.27E-47 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_02077 75b702ec5b7842ac62408c953d16f76c 434 Gene3D G3DSA:3.50.50.60 1 273 1.1E-20 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_00609 a10274e645b8f873661f82ef78b83dee 186 Pfam PF02545 Maf-like protein 3 184 1.1E-59 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 VSVS12_00609 a10274e645b8f873661f82ef78b83dee 186 Hamap MF_00528 Septum formation protein Maf [maf]. 3 186 29.539 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 VSVS12_00609 a10274e645b8f873661f82ef78b83dee 186 Gene3D G3DSA:3.90.950.10 2 186 1.3E-69 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VSVS12_00609 a10274e645b8f873661f82ef78b83dee 186 PIRSF PIRSF006305 1 186 3.5E-56 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 VSVS12_00609 a10274e645b8f873661f82ef78b83dee 186 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 182 1.2E-55 T 11-10-2018 IPR003697 Maf-like protein GO:0047429 VSVS12_00609 a10274e645b8f873661f82ef78b83dee 186 SUPERFAMILY SSF52972 2 184 3.14E-60 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VSVS12_04605 c6effa6453721893439becb846e622ea 940 Pfam PF10145 Phage-related minor tail protein 233 435 1.8E-15 T 11-10-2018 IPR010090 Phage tail tape measure protein VSVS12_03981 f6e91933299ed0f2e042d87293ff57f2 190 SUPERFAMILY SSF55174 14 88 2.88E-17 T 11-10-2018 VSVS12_03981 f6e91933299ed0f2e042d87293ff57f2 190 Gene3D G3DSA:3.10.290.10 18 89 2.1E-20 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VSVS12_03981 f6e91933299ed0f2e042d87293ff57f2 190 Pfam PF13275 S4 domain 24 87 2.5E-21 T 11-10-2018 VSVS12_00445 c064a8da991674bda2d9661a13a4f703 223 SUPERFAMILY SSF51366 4 218 1.26E-78 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VSVS12_00445 c064a8da991674bda2d9661a13a4f703 223 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 VSVS12_00445 c064a8da991674bda2d9661a13a4f703 223 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 6.0E-101 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 VSVS12_00445 c064a8da991674bda2d9661a13a4f703 223 PIRSF PIRSF001461 1 223 8.6E-108 T 11-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 VSVS12_00445 c064a8da991674bda2d9661a13a4f703 223 Gene3D G3DSA:3.20.20.70 5 222 4.8E-88 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_00445 c064a8da991674bda2d9661a13a4f703 223 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 VSVS12_00445 c064a8da991674bda2d9661a13a4f703 223 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 5.2E-93 T 11-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 VSVS12_02805 8bf78c1750f22e71da943d1307e83f8f 295 Pfam PF00691 OmpA family 202 273 9.6E-10 T 11-10-2018 IPR006665 OmpA-like domain VSVS12_02805 8bf78c1750f22e71da943d1307e83f8f 295 Gene3D G3DSA:3.30.1330.60 188 295 1.2E-15 T 11-10-2018 IPR036737 OmpA-like domain superfamily VSVS12_02805 8bf78c1750f22e71da943d1307e83f8f 295 PRINTS PR01021 OMPA domain signature 239 255 5.8E-5 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VSVS12_02805 8bf78c1750f22e71da943d1307e83f8f 295 PRINTS PR01021 OMPA domain signature 224 239 5.8E-5 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VSVS12_02805 8bf78c1750f22e71da943d1307e83f8f 295 SUPERFAMILY SSF103088 190 292 6.54E-16 T 11-10-2018 IPR036737 OmpA-like domain superfamily VSVS12_01792 8f4c3f8607e3d17d7685af3249e2d8a2 435 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 335 421 3.1E-11 T 11-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain VSVS12_01792 8f4c3f8607e3d17d7685af3249e2d8a2 435 Pfam PF13440 Polysaccharide biosynthesis protein 28 333 2.5E-19 T 11-10-2018 VSVS12_00098 00fb62e7866ea4d71b2a005f1be2a4fb 318 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 75 2.0E-8 T 11-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VSVS12_00098 00fb62e7866ea4d71b2a005f1be2a4fb 318 SUPERFAMILY SSF161098 99 300 7.19E-25 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_00098 00fb62e7866ea4d71b2a005f1be2a4fb 318 Gene3D G3DSA:1.10.3720.10 92 312 1.0E-24 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_00098 00fb62e7866ea4d71b2a005f1be2a4fb 318 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 315 8.7E-30 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VSVS12_03283 66685dfad0a11332432b17bbcd1b3ed8 92 Pfam PF03206 Nitrogen fixation protein NifW 9 74 3.7E-5 T 11-10-2018 IPR004893 Nitrogen fixation protein NifW GO:0009399 VSVS12_04399 b7c1f67530946de0fa2e6c8a192c6640 348 SUPERFAMILY SSF51695 57 237 8.11E-21 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VSVS12_04399 b7c1f67530946de0fa2e6c8a192c6640 348 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 60 175 4.1E-10 T 11-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 VSVS12_04399 b7c1f67530946de0fa2e6c8a192c6640 348 Gene3D G3DSA:3.20.20.190 36 345 2.6E-32 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VSVS12_02265 2114d87ef7a3780631262f95e69df55a 75 Pfam PF04023 FeoA domain 1 73 1.6E-17 T 11-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 VSVS12_02265 2114d87ef7a3780631262f95e69df55a 75 Gene3D G3DSA:2.30.30.90 1 75 1.5E-22 T 11-10-2018 IPR038157 Ferrous iron transporter, core domain VSVS12_02265 2114d87ef7a3780631262f95e69df55a 75 SUPERFAMILY SSF50037 4 74 1.24E-18 T 11-10-2018 IPR008988 Transcriptional repressor, C-terminal VSVS12_02265 2114d87ef7a3780631262f95e69df55a 75 SMART SM00899 1 74 4.5E-21 T 11-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 VSVS12_03037 1733f354c165b99524045d3838e21858 636 SMART SM00267 226 393 1.4E-10 T 11-10-2018 IPR000160 GGDEF domain VSVS12_03037 1733f354c165b99524045d3838e21858 636 SUPERFAMILY SSF55073 243 384 7.85E-17 T 11-10-2018 IPR029787 Nucleotide cyclase VSVS12_03037 1733f354c165b99524045d3838e21858 636 Gene3D G3DSA:3.20.20.450 401 636 6.2E-40 T 11-10-2018 IPR035919 EAL domain superfamily VSVS12_03037 1733f354c165b99524045d3838e21858 636 Pfam PF00563 EAL domain 412 634 5.7E-41 T 11-10-2018 IPR001633 EAL domain VSVS12_03037 1733f354c165b99524045d3838e21858 636 SMART SM00052 403 635 1.1E-10 T 11-10-2018 IPR001633 EAL domain VSVS12_03037 1733f354c165b99524045d3838e21858 636 Pfam PF16448 LapD/MoxY periplasmic domain 23 146 6.9E-38 T 11-10-2018 IPR032244 LapD/MoxY, periplasmic domain VSVS12_03037 1733f354c165b99524045d3838e21858 636 Pfam PF00990 Diguanylate cyclase, GGDEF domain 237 384 9.9E-14 T 11-10-2018 IPR000160 GGDEF domain VSVS12_03037 1733f354c165b99524045d3838e21858 636 Gene3D G3DSA:3.30.1040.50 102 150 8.1E-18 T 11-10-2018 VSVS12_03037 1733f354c165b99524045d3838e21858 636 SUPERFAMILY SSF141868 412 635 1.96E-42 T 11-10-2018 IPR035919 EAL domain superfamily VSVS12_03037 1733f354c165b99524045d3838e21858 636 Gene3D G3DSA:3.30.70.270 223 387 2.2E-21 T 11-10-2018 VSVS12_00965 4a9d648308c60b3475db82092a4bd0ab 378 Gene3D G3DSA:2.40.10.410 291 378 2.0E-34 T 11-10-2018 IPR038165 FlgT, C-terminal domain superfamily VSVS12_00965 4a9d648308c60b3475db82092a4bd0ab 378 Gene3D G3DSA:3.30.1660.40 24 113 4.8E-36 T 11-10-2018 IPR038180 FlgT, N-terminal domain superfamily VSVS12_00965 4a9d648308c60b3475db82092a4bd0ab 378 Pfam PF16539 Flagellar assembly protein T, middle domain 115 256 6.0E-40 T 11-10-2018 IPR032386 Flagellar assembly protein T, middle domain VSVS12_00965 4a9d648308c60b3475db82092a4bd0ab 378 Pfam PF16548 Flagellar assembly protein T, N-terminal domain 24 110 3.8E-25 T 11-10-2018 IPR032370 Flagellar assembly protein T, N-terminal VSVS12_00965 4a9d648308c60b3475db82092a4bd0ab 378 Pfam PF16538 Flagellar assembly protein T, C-terminal domain 299 375 2.8E-26 T 11-10-2018 IPR032388 Flagellar assembly protein T, C-terminal VSVS12_00965 4a9d648308c60b3475db82092a4bd0ab 378 Gene3D G3DSA:3.40.50.10610 114 290 1.3E-52 T 11-10-2018 VSVS12_03684 9ae7893d515c81131c8e040e435c923d 588 SUPERFAMILY SSF52540 4 586 5.38E-213 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03684 9ae7893d515c81131c8e040e435c923d 588 Gene3D G3DSA:3.30.1510.10 135 270 1.1E-186 T 11-10-2018 VSVS12_03684 9ae7893d515c81131c8e040e435c923d 588 Gene3D G3DSA:3.10.410.10 475 564 6.9E-31 T 11-10-2018 VSVS12_03684 9ae7893d515c81131c8e040e435c923d 588 Pfam PF01268 Formate--tetrahydrofolate ligase 3 587 1.1E-238 T 11-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 VSVS12_03684 9ae7893d515c81131c8e040e435c923d 588 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 351 362 - T 11-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 VSVS12_03684 9ae7893d515c81131c8e040e435c923d 588 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 1 588 42.53 T 11-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 VSVS12_03684 9ae7893d515c81131c8e040e435c923d 588 Gene3D G3DSA:3.40.50.300 4 460 1.1E-186 T 11-10-2018 VSVS12_03684 9ae7893d515c81131c8e040e435c923d 588 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 109 119 - T 11-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 VSVS12_00197 f517d3ae1126c6d8bf60451fd430372b 631 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.522 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 VSVS12_00197 f517d3ae1126c6d8bf60451fd430372b 631 SMART SM01228 546 617 3.9E-41 T 11-10-2018 VSVS12_00197 f517d3ae1126c6d8bf60451fd430372b 631 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 VSVS12_00197 f517d3ae1126c6d8bf60451fd430372b 631 SUPERFAMILY SSF51905 6 261 3.92E-52 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_00197 f517d3ae1126c6d8bf60451fd430372b 631 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 2.5E-293 T 11-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 VSVS12_00197 f517d3ae1126c6d8bf60451fd430372b 631 Pfam PF01134 Glucose inhibited division protein A 8 398 1.2E-169 T 11-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 VSVS12_00197 f517d3ae1126c6d8bf60451fd430372b 631 Pfam PF13932 GidA associated domain 403 616 3.8E-75 T 11-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 VSVS12_00197 f517d3ae1126c6d8bf60451fd430372b 631 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 11-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 VSVS12_00197 f517d3ae1126c6d8bf60451fd430372b 631 Gene3D G3DSA:3.50.50.60 296 458 1.8E-55 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_00197 f517d3ae1126c6d8bf60451fd430372b 631 Gene3D G3DSA:3.50.50.60 1 231 9.5E-91 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_00197 f517d3ae1126c6d8bf60451fd430372b 631 Gene3D G3DSA:1.10.10.1800 459 550 4.6E-31 T 11-10-2018 VSVS12_00197 f517d3ae1126c6d8bf60451fd430372b 631 Gene3D G3DSA:1.10.150.570 569 622 4.3E-21 T 11-10-2018 VSVS12_02344 ec9f96293943c9e0f5d521439cee8d25 304 Pfam PF03466 LysR substrate binding domain 91 291 1.5E-37 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_02344 ec9f96293943c9e0f5d521439cee8d25 304 SUPERFAMILY SSF53850 92 295 6.15E-38 T 11-10-2018 VSVS12_02344 ec9f96293943c9e0f5d521439cee8d25 304 SUPERFAMILY SSF46785 3 85 1.51E-22 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_02344 ec9f96293943c9e0f5d521439cee8d25 304 Gene3D G3DSA:1.10.10.10 7 95 4.3E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_02344 ec9f96293943c9e0f5d521439cee8d25 304 Gene3D G3DSA:3.40.190.10 163 261 1.4E-59 T 11-10-2018 VSVS12_02344 ec9f96293943c9e0f5d521439cee8d25 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.8E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_02344 ec9f96293943c9e0f5d521439cee8d25 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.8E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_02344 ec9f96293943c9e0f5d521439cee8d25 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.8E-9 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_02344 ec9f96293943c9e0f5d521439cee8d25 304 Gene3D G3DSA:3.40.190.10 103 288 1.4E-59 T 11-10-2018 VSVS12_02344 ec9f96293943c9e0f5d521439cee8d25 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 3.5E-20 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_04171 3f9b259e5058af58a8b9d5bc1db3c6da 718 Gene3D G3DSA:2.170.130.10 31 156 2.4E-21 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VSVS12_04171 3f9b259e5058af58a8b9d5bc1db3c6da 718 Gene3D G3DSA:2.40.170.20 165 718 4.5E-46 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VSVS12_04171 3f9b259e5058af58a8b9d5bc1db3c6da 718 SUPERFAMILY SSF56935 35 717 1.61E-84 T 11-10-2018 VSVS12_04171 3f9b259e5058af58a8b9d5bc1db3c6da 718 Pfam PF07715 TonB-dependent Receptor Plug Domain 49 151 3.1E-17 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain VSVS12_04171 3f9b259e5058af58a8b9d5bc1db3c6da 718 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 50 717 3.0E-80 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 VSVS12_04171 3f9b259e5058af58a8b9d5bc1db3c6da 718 Pfam PF00593 TonB dependent receptor 243 717 1.2E-26 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VSVS12_00859 25eb131ed3488f7a474b112307651423 167 Pfam PF04608 Phosphatidylglycerophosphatase A 15 159 1.7E-52 T 11-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 VSVS12_00859 25eb131ed3488f7a474b112307651423 167 SUPERFAMILY SSF101307 9 160 5.89E-50 T 11-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 VSVS12_00859 25eb131ed3488f7a474b112307651423 167 PIRSF PIRSF006162 6 166 2.1E-53 T 11-10-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 VSVS12_01692 6aee00dc4006dc5ca316bef2c93b6904 310 Gene3D G3DSA:3.40.50.620 3 263 3.5E-49 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VSVS12_01692 6aee00dc4006dc5ca316bef2c93b6904 310 Hamap MF_01850 tRNA-cytidine(32) 2-sulfurtransferase [ttcA]. 11 270 57.52 T 11-10-2018 IPR012089 tRNA-cytidine(32) 2-sulfurtransferase GO:0008033 VSVS12_01692 6aee00dc4006dc5ca316bef2c93b6904 310 SUPERFAMILY SSF52402 18 236 2.73E-55 T 11-10-2018 VSVS12_01692 6aee00dc4006dc5ca316bef2c93b6904 310 Pfam PF01171 PP-loop family 43 203 4.7E-15 T 11-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 VSVS12_01692 6aee00dc4006dc5ca316bef2c93b6904 310 PIRSF PIRSF004976 2 272 4.2E-76 T 11-10-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 VSVS12_01664 6356bbed420064ed23338fb8c7f7a134 210 Pfam PF17516 ProQ C-terminal domain 161 209 3.5E-22 T 11-10-2018 IPR035236 RNA chaperone ProQ, C-terminal VSVS12_01664 6356bbed420064ed23338fb8c7f7a134 210 Gene3D G3DSA:1.10.1710.10 1 120 2.4E-24 T 11-10-2018 IPR036442 ProQ/FinO domain superfamily VSVS12_01664 6356bbed420064ed23338fb8c7f7a134 210 Pfam PF04352 ProQ/FINO family 8 115 3.1E-42 T 11-10-2018 IPR016103 ProQ/FinO domain VSVS12_01664 6356bbed420064ed23338fb8c7f7a134 210 SMART SM00945 5 119 3.3E-61 T 11-10-2018 IPR016103 ProQ/FinO domain VSVS12_01664 6356bbed420064ed23338fb8c7f7a134 210 Hamap MF_00749 RNA chaperone ProQ [proQ]. 3 210 29.949 T 11-10-2018 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 VSVS12_01664 6356bbed420064ed23338fb8c7f7a134 210 SUPERFAMILY SSF48657 6 119 2.49E-39 T 11-10-2018 IPR036442 ProQ/FinO domain superfamily VSVS12_02036 03853451796290836daf54ec1b2a29e3 231 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 47 61 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VSVS12_02036 03853451796290836daf54ec1b2a29e3 231 SUPERFAMILY SSF55120 2 199 1.76E-45 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VSVS12_02036 03853451796290836daf54ec1b2a29e3 231 TIGRFAM TIGR01621 RluA-like: pseudouridine synthase Rlu family protein, TIGR01621 1 220 1.2E-102 T 11-10-2018 IPR006508 Pseudouridine synthase, RluA-like VSVS12_02036 03853451796290836daf54ec1b2a29e3 231 Gene3D G3DSA:3.30.2350.10 1 195 7.1E-47 T 11-10-2018 VSVS12_02036 03853451796290836daf54ec1b2a29e3 231 Pfam PF00849 RNA pseudouridylate synthase 10 153 9.8E-25 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VSVS12_00370 e0e113611b614f50188aef19702c4b6a 424 Pfam PF00390 Malic enzyme, N-terminal domain 31 125 3.8E-20 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VSVS12_00370 e0e113611b614f50188aef19702c4b6a 424 SMART SM01274 28 161 7.9E-73 T 11-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 VSVS12_00370 e0e113611b614f50188aef19702c4b6a 424 SUPERFAMILY SSF51735 173 419 6.43E-81 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_00370 e0e113611b614f50188aef19702c4b6a 424 SUPERFAMILY SSF53223 20 171 8.63E-51 T 11-10-2018 VSVS12_00370 e0e113611b614f50188aef19702c4b6a 424 SMART SM00919 173 409 3.5E-140 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 VSVS12_00370 e0e113611b614f50188aef19702c4b6a 424 Gene3D G3DSA:3.40.50.10380 6 170 2.0E-66 T 11-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 VSVS12_00370 e0e113611b614f50188aef19702c4b6a 424 Gene3D G3DSA:3.40.50.720 171 423 8.2E-84 T 11-10-2018 VSVS12_00370 e0e113611b614f50188aef19702c4b6a 424 ProSitePatterns PS00331 Malic enzymes signature. 169 185 - T 11-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 VSVS12_00370 e0e113611b614f50188aef19702c4b6a 424 PIRSF PIRSF000106 53 423 2.6E-73 T 11-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 VSVS12_00370 e0e113611b614f50188aef19702c4b6a 424 Pfam PF03949 Malic enzyme, NAD binding domain 175 365 3.7E-26 T 11-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 VSVS12_01346 2a8dfec7952d2fe5060c02a3facf114e 553 SUPERFAMILY SSF56821 1 552 2.14E-194 T 11-10-2018 IPR011254 Prismane-like superfamily GO:0003824|GO:0016491|GO:0055114 VSVS12_01346 2a8dfec7952d2fe5060c02a3facf114e 553 Gene3D G3DSA:1.20.1270.20 153 235 4.5E-29 T 11-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 VSVS12_01346 2a8dfec7952d2fe5060c02a3facf114e 553 Gene3D G3DSA:3.40.50.2030 237 382 1.5E-62 T 11-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 VSVS12_01346 2a8dfec7952d2fe5060c02a3facf114e 553 Pfam PF03063 Prismane/CO dehydrogenase family 1 548 1.1E-161 T 11-10-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 VSVS12_01346 2a8dfec7952d2fe5060c02a3facf114e 553 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 552 20.286 T 11-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 VSVS12_01346 2a8dfec7952d2fe5060c02a3facf114e 553 PIRSF PIRSF000076 1 553 1.2E-239 T 11-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 VSVS12_01346 2a8dfec7952d2fe5060c02a3facf114e 553 Gene3D G3DSA:3.40.50.2030 383 551 4.1E-60 T 11-10-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 VSVS12_01346 2a8dfec7952d2fe5060c02a3facf114e 553 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 551 1.1E-227 T 11-10-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 VSVS12_01346 2a8dfec7952d2fe5060c02a3facf114e 553 Gene3D G3DSA:1.20.1270.20 1 142 2.6E-36 T 11-10-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 VSVS12_02040 871a9d892ce2a3e279f5fd8a87562333 343 SUPERFAMILY SSF53383 21 339 5.7E-87 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VSVS12_02040 871a9d892ce2a3e279f5fd8a87562333 343 Gene3D G3DSA:3.40.640.10 3 255 1.3E-77 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VSVS12_02040 871a9d892ce2a3e279f5fd8a87562333 343 PIRSF PIRSF001434 1 343 1.4E-109 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VSVS12_02040 871a9d892ce2a3e279f5fd8a87562333 343 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 341 1.6E-102 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VSVS12_02040 871a9d892ce2a3e279f5fd8a87562333 343 Gene3D G3DSA:3.90.1150.10 256 343 6.9E-22 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VSVS12_02040 871a9d892ce2a3e279f5fd8a87562333 343 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 199 213 - T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VSVS12_02040 871a9d892ce2a3e279f5fd8a87562333 343 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 7 341 2.4E-154 T 11-10-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 VSVS12_04212 fb455621ef080304fac5cfbb75f7d43e 225 Gene3D G3DSA:3.10.129.10 76 224 1.3E-34 T 11-10-2018 VSVS12_04212 fb455621ef080304fac5cfbb75f7d43e 225 SUPERFAMILY SSF54637 77 220 7.02E-29 T 11-10-2018 IPR029069 HotDog domain superfamily VSVS12_04212 fb455621ef080304fac5cfbb75f7d43e 225 Pfam PF01575 MaoC like domain 83 204 1.0E-22 T 11-10-2018 IPR002539 MaoC-like dehydratase domain VSVS12_01576 feef44ec0a3a97060f021496725b3fe4 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 30 215 7.5E-12 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VSVS12_01576 feef44ec0a3a97060f021496725b3fe4 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 6 112 2.8E-16 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VSVS12_01576 feef44ec0a3a97060f021496725b3fe4 222 Gene3D G3DSA:1.10.3720.10 1 217 6.4E-41 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_01576 feef44ec0a3a97060f021496725b3fe4 222 SUPERFAMILY SSF161098 9 202 1.05E-30 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_00379 881a097942af53f5439d7f4756e44231 342 Pfam PF01370 NAD dependent epimerase/dehydratase family 18 263 1.2E-55 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 VSVS12_00379 881a097942af53f5439d7f4756e44231 342 Gene3D G3DSA:3.40.50.720 19 322 1.6E-112 T 11-10-2018 VSVS12_00379 881a097942af53f5439d7f4756e44231 342 Gene3D G3DSA:3.90.25.10 193 334 1.6E-112 T 11-10-2018 VSVS12_00379 881a097942af53f5439d7f4756e44231 342 PRINTS PR01713 Nucleotide sugar epimerase signature 301 318 6.7E-8 T 11-10-2018 VSVS12_00379 881a097942af53f5439d7f4756e44231 342 PRINTS PR01713 Nucleotide sugar epimerase signature 257 272 6.7E-8 T 11-10-2018 VSVS12_00379 881a097942af53f5439d7f4756e44231 342 PRINTS PR01713 Nucleotide sugar epimerase signature 44 60 6.7E-8 T 11-10-2018 VSVS12_00379 881a097942af53f5439d7f4756e44231 342 PRINTS PR01713 Nucleotide sugar epimerase signature 233 248 6.7E-8 T 11-10-2018 VSVS12_00379 881a097942af53f5439d7f4756e44231 342 SUPERFAMILY SSF51735 3 337 1.84E-84 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_02618 fd494a8956fa5b128301d75b9ca2c254 317 Pfam PF03186 CobD/Cbib protein 19 283 1.1E-27 T 11-10-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 VSVS12_00389 4a9831d1a5ebeb23c52e0f87ba79406b 707 Gene3D G3DSA:3.40.50.720 158 286 1.9E-25 T 11-10-2018 VSVS12_00389 4a9831d1a5ebeb23c52e0f87ba79406b 707 SUPERFAMILY SSF50129 10 174 3.63E-14 T 11-10-2018 IPR011032 GroES-like superfamily VSVS12_00389 4a9831d1a5ebeb23c52e0f87ba79406b 707 Pfam PF00107 Zinc-binding dehydrogenase 176 294 9.2E-19 T 11-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 VSVS12_00389 4a9831d1a5ebeb23c52e0f87ba79406b 707 Gene3D G3DSA:3.30.360.10 514 706 4.0E-35 T 11-10-2018 VSVS12_00389 4a9831d1a5ebeb23c52e0f87ba79406b 707 SUPERFAMILY SSF55347 516 680 8.34E-19 T 11-10-2018 VSVS12_00389 4a9831d1a5ebeb23c52e0f87ba79406b 707 Gene3D G3DSA:3.40.50.720 390 513 3.2E-21 T 11-10-2018 VSVS12_00389 4a9831d1a5ebeb23c52e0f87ba79406b 707 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 392 503 1.0E-13 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 VSVS12_00389 4a9831d1a5ebeb23c52e0f87ba79406b 707 Gene3D G3DSA:3.90.180.10 1 157 7.1E-16 T 11-10-2018 VSVS12_00389 4a9831d1a5ebeb23c52e0f87ba79406b 707 SUPERFAMILY SSF51735 141 328 1.35E-27 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_00389 4a9831d1a5ebeb23c52e0f87ba79406b 707 SUPERFAMILY SSF51735 393 551 2.3E-32 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_01183 2e9aa1d6b42edbf299c3038c20cd8d0b 194 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 29 119 4.8E-14 T 11-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 VSVS12_01183 2e9aa1d6b42edbf299c3038c20cd8d0b 194 SUPERFAMILY SSF50475 26 177 8.68E-35 T 11-10-2018 VSVS12_01183 2e9aa1d6b42edbf299c3038c20cd8d0b 194 PIRSF PIRSF004633 11 192 7.9E-71 T 11-10-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain VSVS12_01183 2e9aa1d6b42edbf299c3038c20cd8d0b 194 Gene3D G3DSA:2.30.110.10 25 194 1.2E-54 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VSVS12_01183 2e9aa1d6b42edbf299c3038c20cd8d0b 194 TIGRFAM TIGR04110 heme_HutZ: heme utilization protein HutZ 20 185 3.1E-82 T 11-10-2018 IPR014419 Heme utilization protein with pyridoxamine 5'-phosphate domain VSVS12_00004 40f0382807eedde94fff4ef31249e3da 206 Gene3D G3DSA:2.10.109.10 84 206 3.4E-44 T 11-10-2018 VSVS12_00004 40f0382807eedde94fff4ef31249e3da 206 TIGRFAM TIGR00498 lexA: repressor LexA 1 203 1.4E-80 T 11-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 VSVS12_00004 40f0382807eedde94fff4ef31249e3da 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 115 125 1.5E-13 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 VSVS12_00004 40f0382807eedde94fff4ef31249e3da 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 154 166 1.5E-13 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 VSVS12_00004 40f0382807eedde94fff4ef31249e3da 206 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 126 137 1.5E-13 T 11-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 VSVS12_00004 40f0382807eedde94fff4ef31249e3da 206 SUPERFAMILY SSF51306 80 202 2.44E-36 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily VSVS12_00004 40f0382807eedde94fff4ef31249e3da 206 Gene3D G3DSA:1.10.10.10 1 69 7.3E-28 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_00004 40f0382807eedde94fff4ef31249e3da 206 SUPERFAMILY SSF46785 3 69 1.36E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_00004 40f0382807eedde94fff4ef31249e3da 206 Pfam PF00717 Peptidase S24-like 118 183 1.8E-15 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C VSVS12_00004 40f0382807eedde94fff4ef31249e3da 206 Pfam PF01726 LexA DNA binding domain 1 65 1.1E-28 T 11-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 VSVS12_00004 40f0382807eedde94fff4ef31249e3da 206 Hamap MF_00015 LexA repressor [lexA]. 3 203 31.656 T 11-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 VSVS12_00088 ed2b53a2dbab5e87d56392bc9317a63d 428 Pfam PF00069 Protein kinase domain 80 267 4.5E-37 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VSVS12_00088 ed2b53a2dbab5e87d56392bc9317a63d 428 SUPERFAMILY SSF56112 73 301 2.29E-55 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily VSVS12_00088 ed2b53a2dbab5e87d56392bc9317a63d 428 Gene3D G3DSA:1.10.510.10 163 309 9.4E-29 T 11-10-2018 VSVS12_00088 ed2b53a2dbab5e87d56392bc9317a63d 428 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 84 109 - T 11-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 VSVS12_00088 ed2b53a2dbab5e87d56392bc9317a63d 428 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 197 209 - T 11-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 VSVS12_00088 ed2b53a2dbab5e87d56392bc9317a63d 428 SMART SM00220 78 309 6.9E-25 T 11-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 VSVS12_00088 ed2b53a2dbab5e87d56392bc9317a63d 428 Gene3D G3DSA:3.30.200.20 70 158 4.9E-20 T 11-10-2018 VSVS12_03159 0209bd8e57ac5797147aaf24c0953a91 231 SUPERFAMILY SSF75445 138 209 3.4E-20 T 11-10-2018 VSVS12_03159 0209bd8e57ac5797147aaf24c0953a91 231 SUPERFAMILY SSF100950 17 156 4.81E-25 T 11-10-2018 IPR037171 NagB/RpiA transferase-like VSVS12_03159 0209bd8e57ac5797147aaf24c0953a91 231 Gene3D G3DSA:3.30.70.260 136 207 9.0E-62 T 11-10-2018 VSVS12_03159 0209bd8e57ac5797147aaf24c0953a91 231 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 60 216 3.2E-44 T 11-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 VSVS12_03159 0209bd8e57ac5797147aaf24c0953a91 231 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 20 217 1.4E-50 T 11-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 VSVS12_03159 0209bd8e57ac5797147aaf24c0953a91 231 Gene3D G3DSA:3.40.50.1360 16 221 9.0E-62 T 11-10-2018 VSVS12_02851 14f49080c97c49a8d022dde50140afb2 315 Hamap MF_00162 Glutathione synthetase [gshB]. 1 315 176.785 T 11-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 VSVS12_02851 14f49080c97c49a8d022dde50140afb2 315 Gene3D G3DSA:3.30.470.20 197 300 8.3E-40 T 11-10-2018 VSVS12_02851 14f49080c97c49a8d022dde50140afb2 315 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 2.6E-79 T 11-10-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 VSVS12_02851 14f49080c97c49a8d022dde50140afb2 315 SUPERFAMILY SSF52440 2 122 5.75E-45 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VSVS12_02851 14f49080c97c49a8d022dde50140afb2 315 Gene3D G3DSA:3.30.1490.20 137 196 3.1E-29 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VSVS12_02851 14f49080c97c49a8d022dde50140afb2 315 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 3.1E-47 T 11-10-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 VSVS12_02851 14f49080c97c49a8d022dde50140afb2 315 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 311 9.7E-138 T 11-10-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 VSVS12_02851 14f49080c97c49a8d022dde50140afb2 315 SUPERFAMILY SSF56059 123 313 8.62E-59 T 11-10-2018 VSVS12_02851 14f49080c97c49a8d022dde50140afb2 315 Gene3D G3DSA:3.40.50.20 1 129 3.8E-51 T 11-10-2018 VSVS12_01980 55a02cb3295b6f0a24baf0bed23c7c48 410 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 316 1.1E-55 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VSVS12_01980 55a02cb3295b6f0a24baf0bed23c7c48 410 SUPERFAMILY SSF51905 2 322 9.86E-31 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_01980 55a02cb3295b6f0a24baf0bed23c7c48 410 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 6.2E-7 T 11-10-2018 VSVS12_01980 55a02cb3295b6f0a24baf0bed23c7c48 410 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 154 179 6.2E-7 T 11-10-2018 VSVS12_01980 55a02cb3295b6f0a24baf0bed23c7c48 410 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 288 295 6.2E-7 T 11-10-2018 VSVS12_01980 55a02cb3295b6f0a24baf0bed23c7c48 410 Gene3D G3DSA:3.50.50.100 1 388 1.2E-102 T 11-10-2018 VSVS12_01980 55a02cb3295b6f0a24baf0bed23c7c48 410 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 154 172 3.3E-9 T 11-10-2018 VSVS12_01980 55a02cb3295b6f0a24baf0bed23c7c48 410 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 3.3E-9 T 11-10-2018 VSVS12_01980 55a02cb3295b6f0a24baf0bed23c7c48 410 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 3.3E-9 T 11-10-2018 VSVS12_01273 b4866bb433e17a7f9dd86dea1525d106 435 SUPERFAMILY SSF51569 4 424 2.56E-165 T 11-10-2018 VSVS12_01273 b4866bb433e17a7f9dd86dea1525d106 435 Gene3D G3DSA:1.10.400.20 288 411 6.9E-173 T 11-10-2018 VSVS12_01273 b4866bb433e17a7f9dd86dea1525d106 435 Gene3D G3DSA:3.20.20.70 8 416 6.9E-173 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_01273 b4866bb433e17a7f9dd86dea1525d106 435 TIGRFAM TIGR02810 agaZ_gatZ: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit 6 424 4.4E-207 T 11-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 VSVS12_01273 b4866bb433e17a7f9dd86dea1525d106 435 PIRSF PIRSF009264 1 430 9.2E-199 T 11-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 VSVS12_01273 b4866bb433e17a7f9dd86dea1525d106 435 Pfam PF08013 Tagatose 6 phosphate kinase 4 424 5.3E-196 T 11-10-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 VSVS12_02450 3d8fc6f585e6a94f7373928b1d376752 372 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 359 35.255 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 VSVS12_02450 3d8fc6f585e6a94f7373928b1d376752 372 SUPERFAMILY SSF56014 265 354 9.38E-12 T 11-10-2018 VSVS12_02450 3d8fc6f585e6a94f7373928b1d376752 372 Gene3D G3DSA:3.20.20.20 1 261 2.3E-104 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VSVS12_02450 3d8fc6f585e6a94f7373928b1d376752 372 SUPERFAMILY SSF51717 15 208 8.63E-12 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VSVS12_02450 3d8fc6f585e6a94f7373928b1d376752 372 Gene3D G3DSA:3.30.413.10 262 361 1.4E-24 T 11-10-2018 VSVS12_02450 3d8fc6f585e6a94f7373928b1d376752 372 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 351 1.9E-126 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 VSVS12_02450 3d8fc6f585e6a94f7373928b1d376752 372 PIRSF PIRSF004640 1 364 3.0E-147 T 11-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 VSVS12_02450 3d8fc6f585e6a94f7373928b1d376752 372 Pfam PF04551 GcpE protein 14 354 6.0E-132 T 11-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 VSVS12_02246 e16fbe235f3050f045835593a0329573 166 Pfam PF10975 Protein of unknown function (DUF2802) 71 137 3.6E-22 T 11-10-2018 IPR021244 Protein of unknown function DUF2802 VSVS12_02881 258e7ad5528bc097a70dc88bd4d1bf9f 361 SUPERFAMILY SSF51419 11 237 1.44E-70 T 11-10-2018 IPR029066 PLP-binding barrel VSVS12_02881 258e7ad5528bc097a70dc88bd4d1bf9f 361 SUPERFAMILY SSF50621 230 360 5.58E-47 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VSVS12_02881 258e7ad5528bc097a70dc88bd4d1bf9f 361 TIGRFAM TIGR00492 alr: alanine racemase 6 359 3.2E-134 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VSVS12_02881 258e7ad5528bc097a70dc88bd4d1bf9f 361 Gene3D G3DSA:3.20.20.10 13 220 1.1E-133 T 11-10-2018 IPR029066 PLP-binding barrel VSVS12_02881 258e7ad5528bc097a70dc88bd4d1bf9f 361 Pfam PF01168 Alanine racemase, N-terminal domain 11 222 3.9E-71 T 11-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VSVS12_02881 258e7ad5528bc097a70dc88bd4d1bf9f 361 Hamap MF_01201 Alanine racemase. 4 360 35.507 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VSVS12_02881 258e7ad5528bc097a70dc88bd4d1bf9f 361 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 34 44 - T 11-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VSVS12_02881 258e7ad5528bc097a70dc88bd4d1bf9f 361 Gene3D G3DSA:2.40.37.10 11 355 1.1E-133 T 11-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 VSVS12_02881 258e7ad5528bc097a70dc88bd4d1bf9f 361 SMART SM01005 236 360 9.8E-67 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VSVS12_02881 258e7ad5528bc097a70dc88bd4d1bf9f 361 Pfam PF00842 Alanine racemase, C-terminal domain 236 359 4.4E-42 T 11-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VSVS12_02881 258e7ad5528bc097a70dc88bd4d1bf9f 361 PRINTS PR00992 Alanine racemase signature 195 222 2.3E-72 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VSVS12_02881 258e7ad5528bc097a70dc88bd4d1bf9f 361 PRINTS PR00992 Alanine racemase signature 342 355 2.3E-72 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VSVS12_02881 258e7ad5528bc097a70dc88bd4d1bf9f 361 PRINTS PR00992 Alanine racemase signature 63 81 2.3E-72 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VSVS12_02881 258e7ad5528bc097a70dc88bd4d1bf9f 361 PRINTS PR00992 Alanine racemase signature 158 169 2.3E-72 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VSVS12_02881 258e7ad5528bc097a70dc88bd4d1bf9f 361 PRINTS PR00992 Alanine racemase signature 290 307 2.3E-72 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VSVS12_02881 258e7ad5528bc097a70dc88bd4d1bf9f 361 PRINTS PR00992 Alanine racemase signature 269 284 2.3E-72 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VSVS12_02881 258e7ad5528bc097a70dc88bd4d1bf9f 361 PRINTS PR00992 Alanine racemase signature 123 135 2.3E-72 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VSVS12_02881 258e7ad5528bc097a70dc88bd4d1bf9f 361 PRINTS PR00992 Alanine racemase signature 252 267 2.3E-72 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VSVS12_02881 258e7ad5528bc097a70dc88bd4d1bf9f 361 PRINTS PR00992 Alanine racemase signature 29 45 2.3E-72 T 11-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 VSVS12_02758 b50702197ff9814e3562be59a3c92407 860 Pfam PF02272 DHHA1 domain 720 856 3.5E-29 T 11-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 VSVS12_02758 b50702197ff9814e3562be59a3c92407 860 Gene3D G3DSA:3.30.930.10 2 251 4.5E-120 T 11-10-2018 VSVS12_02758 b50702197ff9814e3562be59a3c92407 860 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 652 695 6.8E-18 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 VSVS12_02758 b50702197ff9814e3562be59a3c92407 860 SMART SM00863 652 695 3.7E-21 T 11-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 VSVS12_02758 b50702197ff9814e3562be59a3c92407 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 4.6E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VSVS12_02758 b50702197ff9814e3562be59a3c92407 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 208 219 4.6E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VSVS12_02758 b50702197ff9814e3562be59a3c92407 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 281 297 4.6E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VSVS12_02758 b50702197ff9814e3562be59a3c92407 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 235 248 4.6E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VSVS12_02758 b50702197ff9814e3562be59a3c92407 860 PRINTS PR00980 Alanyl-tRNA synthetase signature 305 318 4.6E-31 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VSVS12_02758 b50702197ff9814e3562be59a3c92407 860 Gene3D G3DSA:3.10.310.40 748 857 5.8E-32 T 11-10-2018 VSVS12_02758 b50702197ff9814e3562be59a3c92407 860 Pfam PF01411 tRNA synthetases class II (A) 7 553 6.8E-223 T 11-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 VSVS12_02758 b50702197ff9814e3562be59a3c92407 860 Gene3D G3DSA:2.40.30.130 466 551 1.6E-10 T 11-10-2018 VSVS12_02758 b50702197ff9814e3562be59a3c92407 860 SUPERFAMILY SSF55186 551 718 1.03E-52 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 VSVS12_02758 b50702197ff9814e3562be59a3c92407 860 SUPERFAMILY SSF101353 255 462 6.15E-59 T 11-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 VSVS12_02758 b50702197ff9814e3562be59a3c92407 860 Gene3D G3DSA:3.30.54.20 623 676 3.3E-50 T 11-10-2018 VSVS12_02758 b50702197ff9814e3562be59a3c92407 860 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 839 0.0 T 11-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 VSVS12_02758 b50702197ff9814e3562be59a3c92407 860 Gene3D G3DSA:3.30.980.10 562 696 3.3E-50 T 11-10-2018 VSVS12_02758 b50702197ff9814e3562be59a3c92407 860 SUPERFAMILY SSF50447 453 551 2.93E-18 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VSVS12_02758 b50702197ff9814e3562be59a3c92407 860 SUPERFAMILY SSF55681 3 254 3.98E-108 T 11-10-2018 VSVS12_02758 b50702197ff9814e3562be59a3c92407 860 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 860 198.519 T 11-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 VSVS12_02932 b212f3fae9c5456ef34eea7e41d7a2e6 355 SUPERFAMILY SSF51726 1 354 1.59E-122 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VSVS12_02932 b212f3fae9c5456ef34eea7e41d7a2e6 355 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 VSVS12_02932 b212f3fae9c5456ef34eea7e41d7a2e6 355 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 348 1.8E-139 T 11-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 VSVS12_02932 b212f3fae9c5456ef34eea7e41d7a2e6 355 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 350 50.692 T 11-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 VSVS12_02932 b212f3fae9c5456ef34eea7e41d7a2e6 355 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 VSVS12_02932 b212f3fae9c5456ef34eea7e41d7a2e6 355 Gene3D G3DSA:3.20.20.210 1 355 1.8E-159 T 11-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 VSVS12_02932 b212f3fae9c5456ef34eea7e41d7a2e6 355 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 348 1.9E-141 T 11-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 VSVS12_04144 9f20e4fbe4eef52ac355e5286b8a9e1b 120 SUPERFAMILY SSF54403 36 106 4.37E-13 T 11-10-2018 VSVS12_04144 9f20e4fbe4eef52ac355e5286b8a9e1b 120 Gene3D G3DSA:3.10.450.10 36 117 3.6E-9 T 11-10-2018 VSVS12_04144 9f20e4fbe4eef52ac355e5286b8a9e1b 120 Pfam PF00031 Cystatin domain 49 102 5.1E-6 T 11-10-2018 IPR000010 Cystatin domain GO:0004869 VSVS12_02387 8a7b2a2ef5986aadb7bf17367962ebcb 463 Pfam PF00854 POT family 232 406 1.9E-30 T 11-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 VSVS12_02387 8a7b2a2ef5986aadb7bf17367962ebcb 463 Pfam PF00854 POT family 86 198 1.9E-28 T 11-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 VSVS12_02387 8a7b2a2ef5986aadb7bf17367962ebcb 463 SUPERFAMILY SSF103473 8 435 4.84E-40 T 11-10-2018 IPR036259 MFS transporter superfamily VSVS12_02387 8a7b2a2ef5986aadb7bf17367962ebcb 463 Gene3D G3DSA:1.20.1250.20 1 227 4.4E-74 T 11-10-2018 VSVS12_02387 8a7b2a2ef5986aadb7bf17367962ebcb 463 Gene3D G3DSA:1.20.1250.20 228 454 2.3E-59 T 11-10-2018 VSVS12_02387 8a7b2a2ef5986aadb7bf17367962ebcb 463 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 154 166 - T 11-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 VSVS12_02387 8a7b2a2ef5986aadb7bf17367962ebcb 463 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 6 216 2.1E-59 T 11-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 VSVS12_02387 8a7b2a2ef5986aadb7bf17367962ebcb 463 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 227 441 9.6E-47 T 11-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 VSVS12_01656 98da4505531d816d4b04319448a5d7c4 159 Gene3D G3DSA:3.10.129.10 4 143 3.5E-24 T 11-10-2018 VSVS12_01656 98da4505531d816d4b04319448a5d7c4 159 SUPERFAMILY SSF54637 14 156 8.96E-15 T 11-10-2018 IPR029069 HotDog domain superfamily VSVS12_01656 98da4505531d816d4b04319448a5d7c4 159 Pfam PF14539 Domain of unknown function (DUF4442) 17 103 1.3E-7 T 11-10-2018 IPR027961 Protein of unknown function DUF4442 VSVS12_03024 f505bbb2544305f3a8f707e6d7ee2134 155 Gene3D G3DSA:3.30.70.920 55 151 7.9E-23 T 11-10-2018 VSVS12_03024 f505bbb2544305f3a8f707e6d7ee2134 155 Gene3D G3DSA:1.10.10.10 1 54 6.3E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_03024 f505bbb2544305f3a8f707e6d7ee2134 155 SMART SM00344 3 112 5.5E-42 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VSVS12_03024 f505bbb2544305f3a8f707e6d7ee2134 155 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 49 3.1E-17 T 11-10-2018 VSVS12_03024 f505bbb2544305f3a8f707e6d7ee2134 155 SUPERFAMILY SSF54909 63 148 3.62E-18 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel VSVS12_03024 f505bbb2544305f3a8f707e6d7ee2134 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 6.1E-16 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VSVS12_03024 f505bbb2544305f3a8f707e6d7ee2134 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 6.1E-16 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VSVS12_03024 f505bbb2544305f3a8f707e6d7ee2134 155 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 6.1E-16 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VSVS12_03024 f505bbb2544305f3a8f707e6d7ee2134 155 SUPERFAMILY SSF46785 2 63 2.97E-18 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_03024 f505bbb2544305f3a8f707e6d7ee2134 155 Pfam PF01037 Lrp/AsnC ligand binding domain 69 143 1.1E-18 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VSVS12_03024 f505bbb2544305f3a8f707e6d7ee2134 155 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 11-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VSVS12_01982 92ae13e0962635e29265b7140a4d7cc4 133 Pfam PF04134 Protein of unknown function, DUF393 13 119 6.3E-18 T 11-10-2018 IPR007263 Protein of unknown function DUF393 VSVS12_02264 1cb2897285f822bfc9b995c010d0649c 756 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 3.6E-5 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 VSVS12_02264 1cb2897285f822bfc9b995c010d0649c 756 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 53 68 3.6E-5 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 VSVS12_02264 1cb2897285f822bfc9b995c010d0649c 756 Gene3D G3DSA:3.40.50.300 3 184 4.6E-42 T 11-10-2018 VSVS12_02264 1cb2897285f822bfc9b995c010d0649c 756 Pfam PF07664 Ferrous iron transport protein B C terminus 452 504 2.1E-19 T 11-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 VSVS12_02264 1cb2897285f822bfc9b995c010d0649c 756 Pfam PF07670 Nucleoside recognition 349 440 1.7E-13 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VSVS12_02264 1cb2897285f822bfc9b995c010d0649c 756 Pfam PF07670 Nucleoside recognition 509 690 1.0E-36 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VSVS12_02264 1cb2897285f822bfc9b995c010d0649c 756 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 2 152 7.7E-12 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VSVS12_02264 1cb2897285f822bfc9b995c010d0649c 756 Pfam PF02421 Ferrous iron transport protein B 4 159 9.4E-57 T 11-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 VSVS12_02264 1cb2897285f822bfc9b995c010d0649c 756 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 9 686 3.0E-178 T 11-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 VSVS12_02264 1cb2897285f822bfc9b995c010d0649c 756 SUPERFAMILY SSF52540 4 174 1.6E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00940 6fbb52670fd1604ee7f1c4ceadcc9284 306 PRINTS PR00721 Stomatin signature 78 99 2.4E-28 T 11-10-2018 IPR001972 Stomatin family GO:0016020 VSVS12_00940 6fbb52670fd1604ee7f1c4ceadcc9284 306 PRINTS PR00721 Stomatin signature 113 130 2.4E-28 T 11-10-2018 IPR001972 Stomatin family GO:0016020 VSVS12_00940 6fbb52670fd1604ee7f1c4ceadcc9284 306 PRINTS PR00721 Stomatin signature 133 156 2.4E-28 T 11-10-2018 IPR001972 Stomatin family GO:0016020 VSVS12_00940 6fbb52670fd1604ee7f1c4ceadcc9284 306 PRINTS PR00721 Stomatin signature 176 197 2.4E-28 T 11-10-2018 IPR001972 Stomatin family GO:0016020 VSVS12_00940 6fbb52670fd1604ee7f1c4ceadcc9284 306 PRINTS PR00721 Stomatin signature 157 175 2.4E-28 T 11-10-2018 IPR001972 Stomatin family GO:0016020 VSVS12_00940 6fbb52670fd1604ee7f1c4ceadcc9284 306 Pfam PF16200 C-terminal region of band_7 242 303 2.5E-7 T 11-10-2018 IPR032435 Band 7, C-terminal extension Reactome: R-HSA-8949664 VSVS12_00940 6fbb52670fd1604ee7f1c4ceadcc9284 306 Pfam PF01145 SPFH domain / Band 7 family 27 196 3.1E-33 T 11-10-2018 IPR001107 Band 7 domain VSVS12_00940 6fbb52670fd1604ee7f1c4ceadcc9284 306 SUPERFAMILY SSF117892 54 188 2.62E-40 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily VSVS12_00940 6fbb52670fd1604ee7f1c4ceadcc9284 306 Gene3D G3DSA:3.30.479.30 51 183 1.7E-42 T 11-10-2018 VSVS12_00940 6fbb52670fd1604ee7f1c4ceadcc9284 306 ProSitePatterns PS01270 Band 7 protein family signature. 137 165 - T 11-10-2018 IPR018080 Band 7/stomatin-like, conserved site VSVS12_00940 6fbb52670fd1604ee7f1c4ceadcc9284 306 SMART SM00244 23 181 1.1E-56 T 11-10-2018 IPR001107 Band 7 domain VSVS12_01877 b35a6d7e79c231772f022be414ad1be6 373 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 51 338 7.8E-70 T 11-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VSVS12_01877 b35a6d7e79c231772f022be414ad1be6 373 Gene3D G3DSA:3.40.190.170 49 359 3.8E-116 T 11-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VSVS12_01877 b35a6d7e79c231772f022be414ad1be6 373 PIRSF PIRSF039026 6 373 4.7E-137 T 11-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like VSVS12_01877 b35a6d7e79c231772f022be414ad1be6 373 Gene3D G3DSA:3.40.190.10 167 338 3.8E-116 T 11-10-2018 VSVS12_01467 87a75ff311e18eda3a5115eb526d2ad6 114 Pfam PF01844 HNH endonuclease 31 79 6.2E-11 T 11-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 VSVS12_01467 87a75ff311e18eda3a5115eb526d2ad6 114 SMART SM00507 19 74 2.9E-4 T 11-10-2018 IPR003615 HNH nuclease VSVS12_01770 524e1cb1b7d2af1b70c3ba50c44f9277 230 Gene3D G3DSA:3.40.50.300 4 194 6.3E-19 T 11-10-2018 VSVS12_01770 524e1cb1b7d2af1b70c3ba50c44f9277 230 SUPERFAMILY SSF52540 22 193 2.43E-13 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01769 0203299196d8bb78128569d572a12bf2 320 Gene3D G3DSA:3.10.560.10 198 291 8.7E-19 T 11-10-2018 VSVS12_01769 0203299196d8bb78128569d572a12bf2 320 Gene3D G3DSA:3.10.560.10 8 93 4.5E-12 T 11-10-2018 VSVS12_01769 0203299196d8bb78128569d572a12bf2 320 Gene3D G3DSA:3.10.560.10 102 197 3.4E-17 T 11-10-2018 VSVS12_01769 0203299196d8bb78128569d572a12bf2 320 Pfam PF10531 SLBB domain 115 158 7.6E-7 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VSVS12_01769 0203299196d8bb78128569d572a12bf2 320 Pfam PF10531 SLBB domain 210 252 2.0E-10 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VSVS12_01769 0203299196d8bb78128569d572a12bf2 320 Pfam PF10531 SLBB domain 15 61 1.1E-6 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VSVS12_01642 6f4ed8e25dde8ab204002ce999ceaa5d 725 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 565 583 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VSVS12_01642 6f4ed8e25dde8ab204002ce999ceaa5d 725 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 635 697 7.3E-8 T 11-10-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass VSVS12_01642 6f4ed8e25dde8ab204002ce999ceaa5d 725 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 592 610 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VSVS12_01642 6f4ed8e25dde8ab204002ce999ceaa5d 725 Gene3D G3DSA:2.150.10.10 588 699 1.6E-18 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_01642 6f4ed8e25dde8ab204002ce999ceaa5d 725 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 583 601 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VSVS12_01642 6f4ed8e25dde8ab204002ce999ceaa5d 725 PRINTS PR00313 NodO calcium binding signature 587 595 2.6E-9 T 11-10-2018 VSVS12_01642 6f4ed8e25dde8ab204002ce999ceaa5d 725 PRINTS PR00313 NodO calcium binding signature 605 613 2.6E-9 T 11-10-2018 VSVS12_01642 6f4ed8e25dde8ab204002ce999ceaa5d 725 PRINTS PR00313 NodO calcium binding signature 566 577 2.6E-9 T 11-10-2018 VSVS12_01642 6f4ed8e25dde8ab204002ce999ceaa5d 725 PRINTS PR00313 NodO calcium binding signature 614 623 2.6E-9 T 11-10-2018 VSVS12_01642 6f4ed8e25dde8ab204002ce999ceaa5d 725 SUPERFAMILY SSF141072 314 422 1.96E-6 T 11-10-2018 IPR038081 CalX-like domain superfamily VSVS12_01642 6f4ed8e25dde8ab204002ce999ceaa5d 725 SUPERFAMILY SSF51120 472 688 2.09E-22 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_01642 6f4ed8e25dde8ab204002ce999ceaa5d 725 Gene3D G3DSA:2.150.10.10 534 587 3.8E-8 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_01642 6f4ed8e25dde8ab204002ce999ceaa5d 725 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 574 592 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VSVS12_00352 ee7051a2ac1270164b193a669b2ad69e 432 SUPERFAMILY SSF53756 60 425 5.46E-17 T 11-10-2018 VSVS12_00352 ee7051a2ac1270164b193a669b2ad69e 432 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 34 219 1.0E-60 T 11-10-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 VSVS12_00352 ee7051a2ac1270164b193a669b2ad69e 432 Gene3D G3DSA:3.40.50.2000 223 412 1.3E-62 T 11-10-2018 VSVS12_00352 ee7051a2ac1270164b193a669b2ad69e 432 Gene3D G3DSA:3.40.50.11720 45 217 4.8E-47 T 11-10-2018 IPR038107 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal domain superfamily KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 VSVS12_00352 ee7051a2ac1270164b193a669b2ad69e 432 Pfam PF00534 Glycosyl transferases group 1 248 409 6.5E-11 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 VSVS12_00101 5a2ff1eecdff594c81192a3f026c57e4 580 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_00101 5a2ff1eecdff594c81192a3f026c57e4 580 Pfam PF00005 ABC transporter 24 181 3.7E-29 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_00101 5a2ff1eecdff594c81192a3f026c57e4 580 Pfam PF00005 ABC transporter 330 483 2.1E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_00101 5a2ff1eecdff594c81192a3f026c57e4 580 SUPERFAMILY SSF52540 303 553 2.34E-72 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00101 5a2ff1eecdff594c81192a3f026c57e4 580 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 265 5.3E-5 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VSVS12_00101 5a2ff1eecdff594c81192a3f026c57e4 580 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 534 566 2.4E-4 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VSVS12_00101 5a2ff1eecdff594c81192a3f026c57e4 580 SUPERFAMILY SSF52540 3 253 1.15E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00101 5a2ff1eecdff594c81192a3f026c57e4 580 SMART SM00382 338 534 4.8E-17 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_00101 5a2ff1eecdff594c81192a3f026c57e4 580 SMART SM00382 32 231 8.8E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_00101 5a2ff1eecdff594c81192a3f026c57e4 580 Gene3D G3DSA:3.40.50.300 1 287 1.2E-84 T 11-10-2018 VSVS12_00101 5a2ff1eecdff594c81192a3f026c57e4 580 Gene3D G3DSA:3.40.50.300 300 579 1.4E-86 T 11-10-2018 VSVS12_00101 5a2ff1eecdff594c81192a3f026c57e4 580 ProSitePatterns PS00211 ABC transporters family signature. 455 469 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_00465 2ca85242072af13b7a932fd76834ce35 438 SUPERFAMILY SSF52540 3 436 5.63E-179 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00465 2ca85242072af13b7a932fd76834ce35 438 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 11-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VSVS12_00465 2ca85242072af13b7a932fd76834ce35 438 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 11-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VSVS12_00465 2ca85242072af13b7a932fd76834ce35 438 SMART SM00788 4 431 6.6E-300 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VSVS12_00465 2ca85242072af13b7a932fd76834ce35 438 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 431 1.3E-190 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VSVS12_00465 2ca85242072af13b7a932fd76834ce35 438 Pfam PF00709 Adenylosuccinate synthetase 5 430 2.8E-178 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VSVS12_00465 2ca85242072af13b7a932fd76834ce35 438 Gene3D G3DSA:3.90.170.10 267 438 1.3E-66 T 11-10-2018 VSVS12_00465 2ca85242072af13b7a932fd76834ce35 438 Gene3D G3DSA:1.10.300.10 102 201 1.3E-106 T 11-10-2018 VSVS12_00465 2ca85242072af13b7a932fd76834ce35 438 Gene3D G3DSA:3.40.440.10 6 249 1.3E-106 T 11-10-2018 VSVS12_00465 2ca85242072af13b7a932fd76834ce35 438 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 438 217.74 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VSVS12_01834 384b028c7d0bdd341364fd3919f7a521 372 Pfam PF07143 CrtC N-terminal lipocalin domain 78 246 5.8E-42 T 11-10-2018 IPR010791 AttH domain VSVS12_01834 384b028c7d0bdd341364fd3919f7a521 372 SUPERFAMILY SSF159245 53 372 1.01E-85 T 11-10-2018 VSVS12_01834 384b028c7d0bdd341364fd3919f7a521 372 Gene3D G3DSA:2.40.370.10 250 372 5.5E-21 T 11-10-2018 IPR023374 AttH-like domain superfamily VSVS12_01834 384b028c7d0bdd341364fd3919f7a521 372 Pfam PF17186 Lipocalin-like domain 249 372 4.6E-30 T 11-10-2018 VSVS12_01834 384b028c7d0bdd341364fd3919f7a521 372 Gene3D G3DSA:2.40.370.10 64 249 3.2E-49 T 11-10-2018 IPR023374 AttH-like domain superfamily VSVS12_03452 5bac94e64f7107212d141047ac9b720f 365 Pfam PF00990 Diguanylate cyclase, GGDEF domain 284 360 4.6E-17 T 11-10-2018 IPR000160 GGDEF domain VSVS12_03452 5bac94e64f7107212d141047ac9b720f 365 Gene3D G3DSA:3.30.70.270 270 362 4.5E-20 T 11-10-2018 VSVS12_03452 5bac94e64f7107212d141047ac9b720f 365 SMART SM01079 49 207 3.7E-4 T 11-10-2018 IPR006189 CHASE domain VSVS12_03452 5bac94e64f7107212d141047ac9b720f 365 SUPERFAMILY SSF55073 289 360 1.96E-17 T 11-10-2018 IPR029787 Nucleotide cyclase VSVS12_03452 5bac94e64f7107212d141047ac9b720f 365 SMART SM00267 273 365 0.0093 T 11-10-2018 IPR000160 GGDEF domain VSVS12_03452 5bac94e64f7107212d141047ac9b720f 365 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 281 360 1.2E-16 T 11-10-2018 IPR000160 GGDEF domain VSVS12_00741 2cc16040bf95604d5cb78803155a8695 309 SMART SM00729 23 247 3.9E-42 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VSVS12_00741 2cc16040bf95604d5cb78803155a8695 309 SUPERFAMILY SSF102114 13 268 4.58E-49 T 11-10-2018 VSVS12_00741 2cc16040bf95604d5cb78803155a8695 309 Pfam PF16199 Radical_SAM C-terminal domain 209 279 1.1E-17 T 11-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 VSVS12_00741 2cc16040bf95604d5cb78803155a8695 309 Pfam PF04055 Radical SAM superfamily 43 202 1.0E-16 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VSVS12_00741 2cc16040bf95604d5cb78803155a8695 309 Gene3D G3DSA:3.80.30.20 42 269 4.0E-17 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VSVS12_00741 2cc16040bf95604d5cb78803155a8695 309 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 301 2.3E-135 T 11-10-2018 IPR005911 Protein YhcC-like GO:0051536 VSVS12_03505 102cda318e4db973291241345f77ea95 51 Pfam PF11216 Protein of unknown function (DUF3012) 20 51 2.3E-20 T 11-10-2018 IPR021379 Protein of unknown function DUF3012 VSVS12_04128 a6cbf44d47c2426d7be36c4ca388c25c 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 285 3.3E-27 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VSVS12_04128 a6cbf44d47c2426d7be36c4ca388c25c 289 SUPERFAMILY SSF161098 24 276 1.87E-41 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_04128 a6cbf44d47c2426d7be36c4ca388c25c 289 Gene3D G3DSA:1.10.3720.10 64 287 1.0E-35 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_04128 a6cbf44d47c2426d7be36c4ca388c25c 289 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 17 285 4.6E-98 T 11-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 VSVS12_03714 c6e28506294f38934f0e7f3e4f8b3fd8 573 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 406 570 3.1E-12 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VSVS12_03714 c6e28506294f38934f0e7f3e4f8b3fd8 573 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 144 308 1.0E-17 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VSVS12_03714 c6e28506294f38934f0e7f3e4f8b3fd8 573 SUPERFAMILY SSF161098 387 564 7.85E-16 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_03714 c6e28506294f38934f0e7f3e4f8b3fd8 573 SUPERFAMILY SSF161098 99 296 4.36E-6 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_03714 c6e28506294f38934f0e7f3e4f8b3fd8 573 Gene3D G3DSA:1.10.3720.10 90 308 5.0E-9 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_03714 c6e28506294f38934f0e7f3e4f8b3fd8 573 Gene3D G3DSA:1.10.3720.10 384 573 1.8E-12 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_02395 fc5315e4eb3dcc149615a932503705b7 213 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 11-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VSVS12_02395 fc5315e4eb3dcc149615a932503705b7 213 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 3 191 7.8E-77 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 VSVS12_02395 fc5315e4eb3dcc149615a932503705b7 213 Gene3D G3DSA:3.40.50.170 3 213 6.3E-83 T 11-10-2018 VSVS12_02395 fc5315e4eb3dcc149615a932503705b7 213 SUPERFAMILY SSF53328 4 200 4.84E-64 T 11-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VSVS12_02395 fc5315e4eb3dcc149615a932503705b7 213 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 31.264 T 11-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 VSVS12_02395 fc5315e4eb3dcc149615a932503705b7 213 Pfam PF00551 Formyl transferase 3 181 4.6E-62 T 11-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 VSVS12_00417 e650aa140c44187aaecd554963b54749 340 Gene3D G3DSA:3.30.930.10 16 339 1.9E-110 T 11-10-2018 VSVS12_00417 e650aa140c44187aaecd554963b54749 340 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 31 335 8.0E-129 T 11-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 VSVS12_00417 e650aa140c44187aaecd554963b54749 340 SUPERFAMILY SSF55681 22 337 7.76E-83 T 11-10-2018 VSVS12_00417 e650aa140c44187aaecd554963b54749 340 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 17 340 53.287 T 11-10-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 VSVS12_00417 e650aa140c44187aaecd554963b54749 340 Pfam PF00152 tRNA synthetases class II (D, K and N) 12 336 9.9E-47 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VSVS12_02466 114deca8f126168af11325050ff9d05f 358 Gene3D G3DSA:2.40.420.20 269 337 1.5E-69 T 11-10-2018 VSVS12_02466 114deca8f126168af11325050ff9d05f 358 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 44 259 1.3E-30 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VSVS12_02466 114deca8f126168af11325050ff9d05f 358 SUPERFAMILY SSF111369 48 263 9.42E-38 T 11-10-2018 VSVS12_02466 114deca8f126168af11325050ff9d05f 358 Gene3D G3DSA:2.40.30.170 45 268 1.5E-69 T 11-10-2018 VSVS12_02466 114deca8f126168af11325050ff9d05f 358 Gene3D G3DSA:2.40.50.100 58 186 1.5E-69 T 11-10-2018 VSVS12_02466 114deca8f126168af11325050ff9d05f 358 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 339 8.3E-89 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VSVS12_02466 114deca8f126168af11325050ff9d05f 358 Gene3D G3DSA:1.10.287.470 93 152 1.5E-69 T 11-10-2018 VSVS12_01582 6cec9242d44de0340955510fc47445db 207 Gene3D G3DSA:2.40.160.20 19 207 1.5E-21 T 11-10-2018 VSVS12_01582 6cec9242d44de0340955510fc47445db 207 SUPERFAMILY SSF56925 20 207 9.94E-19 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VSVS12_01582 6cec9242d44de0340955510fc47445db 207 Pfam PF13505 Outer membrane protein beta-barrel domain 5 207 1.3E-14 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel VSVS12_00652 16b26b97b04df0d668deb16a713b295b 245 Gene3D G3DSA:3.30.2350.10 4 217 1.4E-70 T 11-10-2018 VSVS12_00652 16b26b97b04df0d668deb16a713b295b 245 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 9 207 2.3E-61 T 11-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VSVS12_00652 16b26b97b04df0d668deb16a713b295b 245 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 60 74 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VSVS12_00652 16b26b97b04df0d668deb16a713b295b 245 Pfam PF00849 RNA pseudouridylate synthase 22 169 9.1E-30 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VSVS12_00652 16b26b97b04df0d668deb16a713b295b 245 SUPERFAMILY SSF55120 8 216 3.04E-65 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VSVS12_03854 e01f62c80f0339195acc7f4f61728514 165 SUPERFAMILY SSF54593 43 163 5.09E-20 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VSVS12_03854 e01f62c80f0339195acc7f4f61728514 165 Gene3D G3DSA:3.10.180.10 45 164 2.0E-25 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VSVS12_02492 b7e0031ff238466d89971a70ddb94435 147 Pfam PF00571 CBS domain 79 127 3.4E-11 T 11-10-2018 IPR000644 CBS domain VSVS12_02492 b7e0031ff238466d89971a70ddb94435 147 Pfam PF00571 CBS domain 4 58 1.5E-11 T 11-10-2018 IPR000644 CBS domain VSVS12_02492 b7e0031ff238466d89971a70ddb94435 147 SUPERFAMILY SSF54631 1 133 1.06E-33 T 11-10-2018 VSVS12_02492 b7e0031ff238466d89971a70ddb94435 147 Gene3D G3DSA:3.10.580.10 1 147 2.3E-52 T 11-10-2018 VSVS12_02492 b7e0031ff238466d89971a70ddb94435 147 SMART SM00116 84 131 1.3E-8 T 11-10-2018 IPR000644 CBS domain VSVS12_02492 b7e0031ff238466d89971a70ddb94435 147 SMART SM00116 11 59 4.3E-7 T 11-10-2018 IPR000644 CBS domain VSVS12_02989 6876794524288e4bdef08023715e7cdf 194 PIRSF PIRSF028160 1 194 7.9E-86 T 11-10-2018 IPR016872 Uncharacterised conserved protein UCP028160 VSVS12_02989 6876794524288e4bdef08023715e7cdf 194 Pfam PF07356 Protein of unknown function (DUF1481) 1 190 8.5E-51 T 11-10-2018 IPR010858 Protein of unknown function DUF1481 VSVS12_02933 984b5f902c04f2e60cac10325bee05a4 264 Pfam PF00293 NUDIX domain 137 241 5.3E-20 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VSVS12_02933 984b5f902c04f2e60cac10325bee05a4 264 Hamap MF_00297 NADH pyrophosphatase [nudC]. 3 262 42.61 T 11-10-2018 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 VSVS12_02933 984b5f902c04f2e60cac10325bee05a4 264 Gene3D G3DSA:3.90.79.10 131 261 4.2E-41 T 11-10-2018 VSVS12_02933 984b5f902c04f2e60cac10325bee05a4 264 SUPERFAMILY SSF55811 66 253 3.14E-44 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VSVS12_02933 984b5f902c04f2e60cac10325bee05a4 264 Gene3D G3DSA:3.90.79.20 3 130 4.9E-34 T 11-10-2018 VSVS12_02933 984b5f902c04f2e60cac10325bee05a4 264 ProSitePatterns PS00893 Nudix box signature. 164 185 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VSVS12_02933 984b5f902c04f2e60cac10325bee05a4 264 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 99 129 8.7E-11 T 11-10-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 VSVS12_02933 984b5f902c04f2e60cac10325bee05a4 264 PRINTS PR00502 NUDIX hydrolase family signature 159 173 5.2E-5 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VSVS12_02933 984b5f902c04f2e60cac10325bee05a4 264 PRINTS PR00502 NUDIX hydrolase family signature 173 188 5.2E-5 T 11-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 VSVS12_00037 fa06564aafec7bb10b1a0a697f743a54 234 Gene3D G3DSA:3.30.450.40 43 220 1.8E-35 T 11-10-2018 IPR029016 GAF-like domain superfamily VSVS12_00037 fa06564aafec7bb10b1a0a697f743a54 234 Pfam PF04340 Protein of unknown function, DUF484 6 222 3.0E-66 T 11-10-2018 IPR007435 Protein of unknown function DUF484 VSVS12_02471 6801fdd13dd7e40ef6b7031da49e2189 248 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 3 207 30.863 T 11-10-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 VSVS12_02471 6801fdd13dd7e40ef6b7031da49e2189 248 Pfam PF03932 CutC family 4 205 3.3E-79 T 11-10-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 VSVS12_02471 6801fdd13dd7e40ef6b7031da49e2189 248 Gene3D G3DSA:3.20.20.380 3 248 5.9E-85 T 11-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 VSVS12_02471 6801fdd13dd7e40ef6b7031da49e2189 248 SUPERFAMILY SSF110395 4 247 7.19E-73 T 11-10-2018 IPR036822 Copper homeostasis (CutC) domain superfamily GO:0005507|GO:0055070 Reactome: R-HSA-936837 VSVS12_00951 b9f806d5cf06e39c3c6ec7e8b79401aa 171 ProDom PD016359 TRANSMEMBRANE TOXS REGULATORY MEMBRANE PERIPLASMIC 1 154 8.0E-55 T 11-10-2018 IPR035288 Trans-membrane regulatory protein ToxS GO:0016021 VSVS12_00951 b9f806d5cf06e39c3c6ec7e8b79401aa 171 Pfam PF17323 Trans-membrane regulatory protein ToxS 21 169 3.0E-66 T 11-10-2018 IPR035288 Trans-membrane regulatory protein ToxS GO:0016021 VSVS12_01366 9b0d96b9766b11e097d6af78754d3987 583 Pfam PF00664 ABC transporter transmembrane region 27 295 2.7E-53 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VSVS12_01366 9b0d96b9766b11e097d6af78754d3987 583 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 581 4.1E-242 T 11-10-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 VSVS12_01366 9b0d96b9766b11e097d6af78754d3987 583 Pfam PF00005 ABC transporter 359 509 1.2E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_01366 9b0d96b9766b11e097d6af78754d3987 583 SMART SM00382 368 555 1.7E-19 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_01366 9b0d96b9766b11e097d6af78754d3987 583 Gene3D G3DSA:3.40.50.300 329 582 1.2E-96 T 11-10-2018 VSVS12_01366 9b0d96b9766b11e097d6af78754d3987 583 SUPERFAMILY SSF52540 332 581 3.76E-93 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01366 9b0d96b9766b11e097d6af78754d3987 583 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_01366 9b0d96b9766b11e097d6af78754d3987 583 SUPERFAMILY SSF90123 15 327 5.62E-71 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VSVS12_01366 9b0d96b9766b11e097d6af78754d3987 583 Gene3D G3DSA:1.20.1560.10 2 328 4.0E-79 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VSVS12_01155 88b39ae8cf7f8882bc66ef9043504e6f 213 Pfam PF02502 Ribose/Galactose Isomerase 3 113 2.1E-25 T 11-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 VSVS12_01155 88b39ae8cf7f8882bc66ef9043504e6f 213 Pfam PF12408 Ribose-5-phosphate isomerase 165 211 2.3E-19 T 11-10-2018 IPR022133 Ribose-5-phosphate isomerase, C-terminal VSVS12_01155 88b39ae8cf7f8882bc66ef9043504e6f 213 SUPERFAMILY SSF89623 1 163 1.7E-31 T 11-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 VSVS12_01155 88b39ae8cf7f8882bc66ef9043504e6f 213 Gene3D G3DSA:3.40.1400.10 1 213 1.5E-85 T 11-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 VSVS12_03836 0f6f8cc217e387c796b0dcb4e41f6b5c 197 SUPERFAMILY SSF103088 72 190 4.19E-31 T 11-10-2018 IPR036737 OmpA-like domain superfamily VSVS12_03836 0f6f8cc217e387c796b0dcb4e41f6b5c 197 Gene3D G3DSA:3.30.1330.60 57 195 4.6E-31 T 11-10-2018 IPR036737 OmpA-like domain superfamily VSVS12_03836 0f6f8cc217e387c796b0dcb4e41f6b5c 197 Pfam PF00691 OmpA family 91 185 9.2E-20 T 11-10-2018 IPR006665 OmpA-like domain VSVS12_03836 0f6f8cc217e387c796b0dcb4e41f6b5c 197 PRINTS PR01021 OMPA domain signature 121 136 3.4E-9 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VSVS12_03836 0f6f8cc217e387c796b0dcb4e41f6b5c 197 PRINTS PR01021 OMPA domain signature 91 113 3.4E-9 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VSVS12_03836 0f6f8cc217e387c796b0dcb4e41f6b5c 197 PRINTS PR01021 OMPA domain signature 136 152 3.4E-9 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VSVS12_01085 ff5d3658055c5c105aa287a84b1eae63 305 SUPERFAMILY SSF52768 3 284 6.71E-78 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily VSVS12_01085 ff5d3658055c5c105aa287a84b1eae63 305 PRINTS PR01270 Histone deacetylase superfamily signature 120 143 2.5E-16 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VSVS12_01085 ff5d3658055c5c105aa287a84b1eae63 305 PRINTS PR01270 Histone deacetylase superfamily signature 154 169 2.5E-16 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VSVS12_01085 ff5d3658055c5c105aa287a84b1eae63 305 PRINTS PR01270 Histone deacetylase superfamily signature 228 238 2.5E-16 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VSVS12_01085 ff5d3658055c5c105aa287a84b1eae63 305 Pfam PF00850 Histone deacetylase domain 25 283 6.3E-49 T 11-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VSVS12_01085 ff5d3658055c5c105aa287a84b1eae63 305 Gene3D G3DSA:3.40.800.20 2 300 7.3E-63 T 11-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VSVS12_01081 34e751ae4550254f5c42964c45208ec0 194 Gene3D G3DSA:2.40.500.20 83 194 1.6E-41 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VSVS12_01081 34e751ae4550254f5c42964c45208ec0 194 Gene3D G3DSA:1.10.287.990 20 82 1.3E-24 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VSVS12_01081 34e751ae4550254f5c42964c45208ec0 194 PIRSF PIRSF000349 1 194 1.6E-83 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VSVS12_01081 34e751ae4550254f5c42964c45208ec0 194 SUPERFAMILY SSF54719 84 193 6.42E-43 T 11-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VSVS12_01081 34e751ae4550254f5c42964c45208ec0 194 SUPERFAMILY SSF46609 1 84 7.46E-35 T 11-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VSVS12_01081 34e751ae4550254f5c42964c45208ec0 194 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 158 165 - T 11-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VSVS12_01081 34e751ae4550254f5c42964c45208ec0 194 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 82 3.8E-34 T 11-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VSVS12_01081 34e751ae4550254f5c42964c45208ec0 194 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 190 7.1E-38 T 11-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VSVS12_01081 34e751ae4550254f5c42964c45208ec0 194 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.5E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VSVS12_01081 34e751ae4550254f5c42964c45208ec0 194 PRINTS PR01703 Manganese superoxide dismutase signature 156 168 1.5E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VSVS12_01081 34e751ae4550254f5c42964c45208ec0 194 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.5E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VSVS12_01081 34e751ae4550254f5c42964c45208ec0 194 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 1.5E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VSVS12_01081 34e751ae4550254f5c42964c45208ec0 194 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 1.5E-21 T 11-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 VSVS12_03255 bebac83a6bd62438eaf6dd41012646a4 249 Gene3D G3DSA:1.10.260.40 24 89 4.6E-8 T 11-10-2018 VSVS12_03255 bebac83a6bd62438eaf6dd41012646a4 249 SUPERFAMILY SSF47413 29 86 1.21E-7 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VSVS12_03255 bebac83a6bd62438eaf6dd41012646a4 249 Pfam PF00717 Peptidase S24-like 153 212 2.0E-4 T 11-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C VSVS12_03255 bebac83a6bd62438eaf6dd41012646a4 249 SUPERFAMILY SSF51306 112 237 1.07E-13 T 11-10-2018 IPR036286 LexA/Signal peptidase-like superfamily VSVS12_03255 bebac83a6bd62438eaf6dd41012646a4 249 Gene3D G3DSA:2.10.109.10 113 240 1.3E-5 T 11-10-2018 VSVS12_03255 bebac83a6bd62438eaf6dd41012646a4 249 SMART SM00530 27 84 0.0011 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VSVS12_03255 bebac83a6bd62438eaf6dd41012646a4 249 Pfam PF01381 Helix-turn-helix 43 84 3.5E-7 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VSVS12_03289 1ffeb442bd9fd42458df5a18af0b896f 241 Pfam PF01614 Bacterial transcriptional regulator 127 235 3.3E-14 T 11-10-2018 IPR014757 Transcription regulator IclR, C-terminal VSVS12_03289 1ffeb442bd9fd42458df5a18af0b896f 241 Gene3D G3DSA:3.30.450.40 77 237 2.9E-58 T 11-10-2018 IPR029016 GAF-like domain superfamily VSVS12_03289 1ffeb442bd9fd42458df5a18af0b896f 241 Pfam PF09339 IclR helix-turn-helix domain 10 58 1.9E-5 T 11-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 VSVS12_03289 1ffeb442bd9fd42458df5a18af0b896f 241 Gene3D G3DSA:1.10.10.10 6 76 7.2E-9 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_03289 1ffeb442bd9fd42458df5a18af0b896f 241 SUPERFAMILY SSF46785 9 62 8.75E-9 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_03289 1ffeb442bd9fd42458df5a18af0b896f 241 SUPERFAMILY SSF55781 84 237 4.17E-31 T 11-10-2018 VSVS12_03962 f7c99f1f1911a6fbce5da575ad8bf9a9 416 Gene3D G3DSA:3.40.50.300 217 416 4.4E-45 T 11-10-2018 VSVS12_03962 f7c99f1f1911a6fbce5da575ad8bf9a9 416 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VSVS12_03962 f7c99f1f1911a6fbce5da575ad8bf9a9 416 SMART SM00490 260 341 3.5E-31 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_03962 f7c99f1f1911a6fbce5da575ad8bf9a9 416 Gene3D G3DSA:3.40.50.300 1 212 7.3E-66 T 11-10-2018 VSVS12_03962 f7c99f1f1911a6fbce5da575ad8bf9a9 416 SUPERFAMILY SSF52540 78 363 3.23E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03962 f7c99f1f1911a6fbce5da575ad8bf9a9 416 Pfam PF00271 Helicase conserved C-terminal domain 233 341 2.7E-27 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_03962 f7c99f1f1911a6fbce5da575ad8bf9a9 416 Pfam PF00270 DEAD/DEAH box helicase 32 193 3.9E-44 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VSVS12_03962 f7c99f1f1911a6fbce5da575ad8bf9a9 416 SMART SM00487 27 224 4.5E-47 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VSVS12_00118 8bb26fe5a0ae3a9bff9fe43aa76899ab 212 Gene3D G3DSA:3.40.50.150 2 109 2.7E-5 T 11-10-2018 VSVS12_00118 8bb26fe5a0ae3a9bff9fe43aa76899ab 212 Gene3D G3DSA:3.40.50.150 110 204 2.1E-10 T 11-10-2018 VSVS12_00118 8bb26fe5a0ae3a9bff9fe43aa76899ab 212 Pfam PF13489 Methyltransferase domain 74 193 6.7E-16 T 11-10-2018 VSVS12_00118 8bb26fe5a0ae3a9bff9fe43aa76899ab 212 SUPERFAMILY SSF53335 47 199 1.8E-22 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_04096 4b32b434f3fd087c6e99c8dadb20f287 165 Pfam PF13673 Acetyltransferase (GNAT) domain 85 150 1.4E-9 T 11-10-2018 IPR000182 GNAT domain VSVS12_04096 4b32b434f3fd087c6e99c8dadb20f287 165 Gene3D G3DSA:3.40.630.30 2 159 3.2E-43 T 11-10-2018 VSVS12_04096 4b32b434f3fd087c6e99c8dadb20f287 165 SUPERFAMILY SSF55729 14 150 6.85E-14 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_01056 185347429693c166ccc5ce44d7650748 195 SUPERFAMILY SSF54862 37 173 2.3E-30 T 11-10-2018 VSVS12_01056 185347429693c166ccc5ce44d7650748 195 Pfam PF04060 Putative Fe-S cluster 44 75 2.2E-14 T 11-10-2018 IPR007202 4Fe-4S domain GO:0051536 VSVS12_01056 185347429693c166ccc5ce44d7650748 195 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 1 186 1.3E-85 T 11-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 VSVS12_01056 185347429693c166ccc5ce44d7650748 195 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 144 155 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VSVS12_01056 185347429693c166ccc5ce44d7650748 195 Gene3D G3DSA:3.30.70.20 82 181 1.4E-22 T 11-10-2018 VSVS12_01056 185347429693c166ccc5ce44d7650748 195 Pfam PF14697 4Fe-4S dicluster domain 107 161 6.1E-18 T 11-10-2018 VSVS12_01056 185347429693c166ccc5ce44d7650748 195 PIRSF PIRSF005784 3 188 4.8E-85 T 11-10-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 VSVS12_01056 185347429693c166ccc5ce44d7650748 195 Hamap MF_00463 Ion-translocating oxidoreductase complex subunit B [rsxB]. 4 166 26.184 T 11-10-2018 IPR010207 Ion-translocating oxidoreductase complex, RnfB/RsxB GO:0009055|GO:0051536 VSVS12_01056 185347429693c166ccc5ce44d7650748 195 Gene3D G3DSA:1.10.15.40 38 81 5.7E-8 T 11-10-2018 VSVS12_02413 b7cea963a6447367ccb11750d2dcdddf 96 Pfam PF13683 Integrase core domain 23 89 6.6E-11 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VSVS12_02413 b7cea963a6447367ccb11750d2dcdddf 96 SUPERFAMILY SSF53098 1 93 1.25E-15 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_02346 b7cea963a6447367ccb11750d2dcdddf 96 Pfam PF13683 Integrase core domain 23 89 6.6E-11 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VSVS12_02346 b7cea963a6447367ccb11750d2dcdddf 96 SUPERFAMILY SSF53098 1 93 1.25E-15 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_00876 4132986daf0371a850c4e1fe1a9ce802 150 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 149 36.42 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VSVS12_00876 4132986daf0371a850c4e1fe1a9ce802 150 SUPERFAMILY SSF54637 7 146 6.2E-50 T 11-10-2018 IPR029069 HotDog domain superfamily VSVS12_00876 4132986daf0371a850c4e1fe1a9ce802 150 Pfam PF07977 FabA-like domain 17 141 2.1E-40 T 11-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VSVS12_00876 4132986daf0371a850c4e1fe1a9ce802 150 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 146 2.6E-60 T 11-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VSVS12_00876 4132986daf0371a850c4e1fe1a9ce802 150 Gene3D G3DSA:3.10.129.10 2 150 4.8E-61 T 11-10-2018 VSVS12_00573 220051060eda4d5325b0d33f4cdc34bd 96 SMART SM01152 8 84 4.9E-36 T 11-10-2018 IPR003746 Protein of unknown function DUF167 VSVS12_00573 220051060eda4d5325b0d33f4cdc34bd 96 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 8 92 6.7E-27 T 11-10-2018 IPR005228 Conserved hypothetical protein CHP00251 VSVS12_00573 220051060eda4d5325b0d33f4cdc34bd 96 SUPERFAMILY SSF69786 4 96 4.58E-31 T 11-10-2018 IPR036591 YggU-like superfamily VSVS12_00573 220051060eda4d5325b0d33f4cdc34bd 96 Hamap MF_00634 UPF0235 protein YggU [yggU]. 8 94 20.064 T 11-10-2018 IPR003746 Protein of unknown function DUF167 VSVS12_00573 220051060eda4d5325b0d33f4cdc34bd 96 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 12 82 7.1E-25 T 11-10-2018 IPR003746 Protein of unknown function DUF167 VSVS12_00573 220051060eda4d5325b0d33f4cdc34bd 96 Gene3D G3DSA:3.30.1200.10 1 96 6.5E-34 T 11-10-2018 IPR036591 YggU-like superfamily VSVS12_04183 547f5d054429752969c11451913350d7 149 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 34 47 - T 11-10-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 VSVS12_04183 547f5d054429752969c11451913350d7 149 SUPERFAMILY SSF75005 25 141 3.3E-43 T 11-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily VSVS12_04183 547f5d054429752969c11451913350d7 149 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 34 137 1.9E-38 T 11-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal VSVS12_04183 547f5d054429752969c11451913350d7 149 Gene3D G3DSA:2.115.10.20 8 148 2.1E-41 T 11-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily VSVS12_02099 1b09ffa4ffb63df6bcfc24eaf4d57d22 769 SUPERFAMILY SSF47203 301 453 7.57E-21 T 11-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 VSVS12_02099 1b09ffa4ffb63df6bcfc24eaf4d57d22 769 Gene3D G3DSA:1.10.540.10 63 176 4.3E-90 T 11-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 VSVS12_02099 1b09ffa4ffb63df6bcfc24eaf4d57d22 769 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 67 173 1.1E-14 T 11-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 VSVS12_02099 1b09ffa4ffb63df6bcfc24eaf4d57d22 769 Gene3D G3DSA:1.20.140.10 301 446 4.3E-90 T 11-10-2018 VSVS12_02099 1b09ffa4ffb63df6bcfc24eaf4d57d22 769 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 178 277 3.5E-10 T 11-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 VSVS12_02099 1b09ffa4ffb63df6bcfc24eaf4d57d22 769 SUPERFAMILY SSF56645 63 296 7.46E-46 T 11-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 VSVS12_02099 1b09ffa4ffb63df6bcfc24eaf4d57d22 769 Pfam PF09317 Domain of unknown function (DUF1974) 455 739 5.8E-111 T 11-10-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 KEGG: 00071+1.3.8.8+1.3.8.7|KEGG: 00280+1.3.8.7|KEGG: 00410+1.3.8.7|KEGG: 00640+1.3.8.7|MetaCyc: PWY-7094|MetaCyc: PWY-7654 VSVS12_02099 1b09ffa4ffb63df6bcfc24eaf4d57d22 769 Gene3D G3DSA:2.40.110.10 177 300 4.3E-90 T 11-10-2018 VSVS12_02099 1b09ffa4ffb63df6bcfc24eaf4d57d22 769 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 301 447 1.8E-9 T 11-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 VSVS12_03998 d17f6f95d95a604ab0293f7a55f0f015 136 Gene3D G3DSA:3.30.70.100 3 135 4.9E-37 T 11-10-2018 VSVS12_03998 d17f6f95d95a604ab0293f7a55f0f015 136 SUPERFAMILY SSF54909 47 129 5.9E-12 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel VSVS12_03998 d17f6f95d95a604ab0293f7a55f0f015 136 Pfam PF07045 Domain of unknown function (DUF1330) 49 127 5.8E-6 T 11-10-2018 IPR010753 Domain of unknown function DUF1330 VSVS12_02100 a5f2ef280c99e3318a6c4fc5779ab304 222 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 25 38 1.3E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VSVS12_02100 a5f2ef280c99e3318a6c4fc5779ab304 222 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 46 69 1.3E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VSVS12_02100 a5f2ef280c99e3318a6c4fc5779ab304 222 ProSitePatterns PS01081 TetR-type HTH domain signature. 37 68 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VSVS12_02100 a5f2ef280c99e3318a6c4fc5779ab304 222 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 71 2.3E-13 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VSVS12_02100 a5f2ef280c99e3318a6c4fc5779ab304 222 SUPERFAMILY SSF46689 18 86 2.87E-18 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_02100 a5f2ef280c99e3318a6c4fc5779ab304 222 Gene3D G3DSA:1.10.357.10 15 222 1.6E-57 T 11-10-2018 VSVS12_02100 a5f2ef280c99e3318a6c4fc5779ab304 222 SUPERFAMILY SSF48498 94 222 9.34E-42 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VSVS12_00806 dbbdeae0e37d379d73ddeee913cee657 168 SUPERFAMILY SSF46785 2 133 6.3E-36 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_00806 dbbdeae0e37d379d73ddeee913cee657 168 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 2.2E-47 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type VSVS12_00806 dbbdeae0e37d379d73ddeee913cee657 168 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 3.0E-66 T 11-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 VSVS12_00806 dbbdeae0e37d379d73ddeee913cee657 168 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 11-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site VSVS12_00806 dbbdeae0e37d379d73ddeee913cee657 168 Gene3D G3DSA:1.10.10.10 1 144 1.3E-54 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_00806 dbbdeae0e37d379d73ddeee913cee657 168 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 1 168 50.421 T 11-10-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 VSVS12_00806 dbbdeae0e37d379d73ddeee913cee657 168 Pfam PF02082 Transcriptional regulator 1 83 9.2E-28 T 11-10-2018 IPR000944 Transcription regulator Rrf2-type VSVS12_01871 55cd5c486f78730ba1640433627b381c 138 PIRSF PIRSF000699 30 138 2.2E-28 T 11-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 VSVS12_01871 55cd5c486f78730ba1640433627b381c 138 SUPERFAMILY SSF46973 36 131 4.97E-27 T 11-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 VSVS12_01871 55cd5c486f78730ba1640433627b381c 138 Gene3D G3DSA:1.20.58.280 32 135 9.0E-28 T 11-10-2018 VSVS12_01871 55cd5c486f78730ba1640433627b381c 138 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 39 131 1.0E-26 T 11-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 VSVS12_00392 f207b90da793b39299a8dc4c70a9448b 316 SUPERFAMILY SSF51735 1 313 2.31E-65 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_00392 f207b90da793b39299a8dc4c70a9448b 316 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 221 4.9E-27 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 VSVS12_00392 f207b90da793b39299a8dc4c70a9448b 316 Gene3D G3DSA:3.40.50.720 2 312 3.2E-61 T 11-10-2018 VSVS12_02599 f9301c63f9526d22b97f0e30c77a2b27 437 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 413 1.2E-134 T 11-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 VSVS12_02599 f9301c63f9526d22b97f0e30c77a2b27 437 Pfam PF05525 Branched-chain amino acid transport protein 8 426 8.5E-151 T 11-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 VSVS12_00784 f04aea96dd1b0a7a7206c3bb57242f4a 478 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 47 260 7.5E-22 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VSVS12_00784 f04aea96dd1b0a7a7206c3bb57242f4a 478 Gene3D G3DSA:1.10.530.10 290 461 8.4E-37 T 11-10-2018 VSVS12_00784 f04aea96dd1b0a7a7206c3bb57242f4a 478 SUPERFAMILY SSF53850 36 273 1.38E-31 T 11-10-2018 VSVS12_00784 f04aea96dd1b0a7a7206c3bb57242f4a 478 SMART SM00062 37 274 8.4E-12 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VSVS12_00784 f04aea96dd1b0a7a7206c3bb57242f4a 478 Gene3D G3DSA:3.40.190.10 126 230 1.3E-47 T 11-10-2018 VSVS12_00784 f04aea96dd1b0a7a7206c3bb57242f4a 478 Pfam PF01464 Transglycosylase SLT domain 296 408 2.0E-16 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 VSVS12_00784 f04aea96dd1b0a7a7206c3bb57242f4a 478 Gene3D G3DSA:3.40.190.10 33 263 1.3E-47 T 11-10-2018 VSVS12_00784 f04aea96dd1b0a7a7206c3bb57242f4a 478 SUPERFAMILY SSF53955 294 452 9.0E-34 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily VSVS12_01711 2d8807335f6f21f1e22f8522c5d9e1c1 149 Pfam PF11749 Protein of unknown function (DUF3305) 53 139 1.2E-18 T 11-10-2018 IPR021736 Protein of unknown function DUF3305 VSVS12_04568 831ce30da6c3ee2e87ccc58c9be3f265 207 SMART SM00862 35 108 3.1E-5 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VSVS12_04568 831ce30da6c3ee2e87ccc58c9be3f265 207 Pfam PF00486 Transcriptional regulatory protein, C terminal 38 108 4.1E-10 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VSVS12_04568 831ce30da6c3ee2e87ccc58c9be3f265 207 Gene3D G3DSA:1.10.10.10 12 125 9.7E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_04568 831ce30da6c3ee2e87ccc58c9be3f265 207 SUPERFAMILY SSF46894 31 109 1.67E-11 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VSVS12_04539 831ce30da6c3ee2e87ccc58c9be3f265 207 SMART SM00862 35 108 3.1E-5 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VSVS12_04539 831ce30da6c3ee2e87ccc58c9be3f265 207 Pfam PF00486 Transcriptional regulatory protein, C terminal 38 108 4.1E-10 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VSVS12_04539 831ce30da6c3ee2e87ccc58c9be3f265 207 Gene3D G3DSA:1.10.10.10 12 125 9.7E-14 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_04539 831ce30da6c3ee2e87ccc58c9be3f265 207 SUPERFAMILY SSF46894 31 109 1.67E-11 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VSVS12_03434 d4dbceaa96e6cd81c03e28e663961d3d 143 PIRSF PIRSF028777 1 138 6.1E-53 T 11-10-2018 IPR031308 Uncharacterised conserved protein UCP028777 VSVS12_03434 d4dbceaa96e6cd81c03e28e663961d3d 143 Pfam PF03733 Inner membrane component domain 76 126 3.0E-18 T 11-10-2018 IPR005185 Inner membrane component domain VSVS12_03434 d4dbceaa96e6cd81c03e28e663961d3d 143 Pfam PF03733 Inner membrane component domain 4 54 4.8E-15 T 11-10-2018 IPR005185 Inner membrane component domain VSVS12_00435 732b15e2e99bb8dd1b713ba193a511d9 833 Pfam PF00912 Transglycosylase 41 215 2.9E-64 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VSVS12_00435 732b15e2e99bb8dd1b713ba193a511d9 833 Gene3D G3DSA:3.40.710.10 229 349 6.0E-9 T 11-10-2018 VSVS12_00435 732b15e2e99bb8dd1b713ba193a511d9 833 SUPERFAMILY SSF56601 197 817 8.05E-112 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VSVS12_00435 732b15e2e99bb8dd1b713ba193a511d9 833 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 51 765 1.5E-166 T 11-10-2018 VSVS12_00435 732b15e2e99bb8dd1b713ba193a511d9 833 SUPERFAMILY SSF53955 29 241 7.59E-79 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily VSVS12_00435 732b15e2e99bb8dd1b713ba193a511d9 833 Pfam PF17092 Penicillin-binding protein OB-like domain 302 420 8.3E-30 T 11-10-2018 IPR031376 Penicillin-binding protein, OB-like domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VSVS12_00435 732b15e2e99bb8dd1b713ba193a511d9 833 Pfam PF00905 Penicillin binding protein transpeptidase domain 423 604 1.0E-23 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VSVS12_00435 732b15e2e99bb8dd1b713ba193a511d9 833 Gene3D G3DSA:1.10.3810.10 34 228 2.0E-79 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VSVS12_00622 4a26d87416daa37863dd80afe0edf2b7 282 PRINTS PR00118 Beta-lactamase class A signature 212 227 8.9E-45 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 VSVS12_00622 4a26d87416daa37863dd80afe0edf2b7 282 PRINTS PR00118 Beta-lactamase class A signature 133 157 8.9E-45 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 VSVS12_00622 4a26d87416daa37863dd80afe0edf2b7 282 PRINTS PR00118 Beta-lactamase class A signature 159 184 8.9E-45 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 VSVS12_00622 4a26d87416daa37863dd80afe0edf2b7 282 PRINTS PR00118 Beta-lactamase class A signature 25 49 8.9E-45 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 VSVS12_00622 4a26d87416daa37863dd80afe0edf2b7 282 PRINTS PR00118 Beta-lactamase class A signature 195 210 8.9E-45 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 VSVS12_00622 4a26d87416daa37863dd80afe0edf2b7 282 PRINTS PR00118 Beta-lactamase class A signature 97 122 8.9E-45 T 11-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 VSVS12_00622 4a26d87416daa37863dd80afe0edf2b7 282 Gene3D G3DSA:3.40.710.10 20 280 8.4E-64 T 11-10-2018 VSVS12_00622 4a26d87416daa37863dd80afe0edf2b7 282 Pfam PF13354 Beta-lactamase enzyme family 44 251 3.2E-32 T 11-10-2018 VSVS12_00622 4a26d87416daa37863dd80afe0edf2b7 282 SUPERFAMILY SSF56601 20 279 1.08E-67 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VSVS12_00622 4a26d87416daa37863dd80afe0edf2b7 282 ProSitePatterns PS00146 Beta-lactamase class-A active site. 57 72 - T 11-10-2018 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 VSVS12_02288 4cc82c7f140731548f5aa9d38e0bdef5 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 5.3E-143 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VSVS12_02288 4cc82c7f140731548f5aa9d38e0bdef5 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VSVS12_02288 4cc82c7f140731548f5aa9d38e0bdef5 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VSVS12_02288 4cc82c7f140731548f5aa9d38e0bdef5 361 Gene3D G3DSA:3.60.150.10 1 360 3.1E-160 T 11-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VSVS12_02288 4cc82c7f140731548f5aa9d38e0bdef5 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 11-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VSVS12_02288 4cc82c7f140731548f5aa9d38e0bdef5 361 Pfam PF01264 Chorismate synthase 10 345 1.1E-143 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VSVS12_02288 4cc82c7f140731548f5aa9d38e0bdef5 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 37.791 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VSVS12_02288 4cc82c7f140731548f5aa9d38e0bdef5 361 SUPERFAMILY SSF103263 4 352 3.92E-149 T 11-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VSVS12_02288 4cc82c7f140731548f5aa9d38e0bdef5 361 PIRSF PIRSF001456 3 359 2.7E-142 T 11-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 VSVS12_00136 547dc1ef50425fae2a3750dbcd06dc1d 335 Gene3D G3DSA:3.40.50.2300 70 311 1.3E-64 T 11-10-2018 VSVS12_00136 547dc1ef50425fae2a3750dbcd06dc1d 335 Pfam PF13377 Periplasmic binding protein-like domain 176 335 1.2E-27 T 11-10-2018 VSVS12_00136 547dc1ef50425fae2a3750dbcd06dc1d 335 SUPERFAMILY SSF53822 67 321 8.14E-55 T 11-10-2018 IPR028082 Periplasmic binding protein-like I VSVS12_00136 547dc1ef50425fae2a3750dbcd06dc1d 335 Gene3D G3DSA:1.10.260.40 1 67 8.4E-17 T 11-10-2018 VSVS12_00136 547dc1ef50425fae2a3750dbcd06dc1d 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 12 30 - T 11-10-2018 VSVS12_00136 547dc1ef50425fae2a3750dbcd06dc1d 335 SMART SM00354 9 79 2.4E-24 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VSVS12_00136 547dc1ef50425fae2a3750dbcd06dc1d 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 56 5.6E-16 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VSVS12_00136 547dc1ef50425fae2a3750dbcd06dc1d 335 Gene3D G3DSA:3.40.50.2300 167 295 1.3E-64 T 11-10-2018 VSVS12_00136 547dc1ef50425fae2a3750dbcd06dc1d 335 SUPERFAMILY SSF47413 8 67 2.58E-14 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VSVS12_03697 8ee414f37f3b2f34ca312b3f18febf5c 253 SUPERFAMILY SSF52172 22 153 3.84E-38 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_03697 8ee414f37f3b2f34ca312b3f18febf5c 253 Gene3D G3DSA:1.10.10.10 144 253 6.1E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_03697 8ee414f37f3b2f34ca312b3f18febf5c 253 Pfam PF00072 Response regulator receiver domain 27 135 7.1E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_03697 8ee414f37f3b2f34ca312b3f18febf5c 253 SUPERFAMILY SSF46894 154 252 3.97E-20 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VSVS12_03697 8ee414f37f3b2f34ca312b3f18febf5c 253 SMART SM00448 25 135 1.2E-36 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_03697 8ee414f37f3b2f34ca312b3f18febf5c 253 SMART SM00862 176 252 8.4E-15 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VSVS12_03697 8ee414f37f3b2f34ca312b3f18febf5c 253 Pfam PF00486 Transcriptional regulatory protein, C terminal 177 251 3.9E-18 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VSVS12_03697 8ee414f37f3b2f34ca312b3f18febf5c 253 Gene3D G3DSA:3.40.50.2300 13 143 3.4E-35 T 11-10-2018 VSVS12_02705 4be14383735a9464fb1b044a21c96f7f 899 SUPERFAMILY SSF56672 361 601 1.2E-16 T 11-10-2018 VSVS12_02705 4be14383735a9464fb1b044a21c96f7f 899 Pfam PF03175 DNA polymerase type B, organellar and viral 308 535 1.4E-5 T 11-10-2018 IPR004868 DNA-directed DNA polymerase, family B, mitochondria/virus GO:0000166|GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VSVS12_01044 e6b699ed88210c06368c4e9d1cd99b73 292 PIRSF PIRSF001365 1 290 5.9E-91 T 11-10-2018 IPR002220 DapA-like GO:0016829 VSVS12_01044 e6b699ed88210c06368c4e9d1cd99b73 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 64.617 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VSVS12_01044 e6b699ed88210c06368c4e9d1cd99b73 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 287 9.4E-116 T 11-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VSVS12_01044 e6b699ed88210c06368c4e9d1cd99b73 292 Gene3D G3DSA:3.20.20.70 1 291 4.4E-108 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_01044 e6b699ed88210c06368c4e9d1cd99b73 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 11-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 VSVS12_01044 e6b699ed88210c06368c4e9d1cd99b73 292 SUPERFAMILY SSF51569 2 288 8.48E-97 T 11-10-2018 VSVS12_01044 e6b699ed88210c06368c4e9d1cd99b73 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 11-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 VSVS12_01044 e6b699ed88210c06368c4e9d1cd99b73 292 SMART SM01130 1 290 8.2E-139 T 11-10-2018 IPR002220 DapA-like GO:0016829 VSVS12_01044 e6b699ed88210c06368c4e9d1cd99b73 292 Pfam PF00701 Dihydrodipicolinate synthetase family 2 288 3.5E-109 T 11-10-2018 IPR002220 DapA-like GO:0016829 VSVS12_01044 e6b699ed88210c06368c4e9d1cd99b73 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 3.5E-34 T 11-10-2018 IPR002220 DapA-like GO:0016829 VSVS12_01044 e6b699ed88210c06368c4e9d1cd99b73 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 3.5E-34 T 11-10-2018 IPR002220 DapA-like GO:0016829 VSVS12_01044 e6b699ed88210c06368c4e9d1cd99b73 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 3.5E-34 T 11-10-2018 IPR002220 DapA-like GO:0016829 VSVS12_01044 e6b699ed88210c06368c4e9d1cd99b73 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 3.5E-34 T 11-10-2018 IPR002220 DapA-like GO:0016829 VSVS12_00855 13432a29f6c567f6632eb21fa134fd6b 369 Gene3D G3DSA:3.40.50.10990 206 368 9.8E-30 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VSVS12_00855 13432a29f6c567f6632eb21fa134fd6b 369 Gene3D G3DSA:3.90.870.10 1 205 8.2E-88 T 11-10-2018 VSVS12_00855 13432a29f6c567f6632eb21fa134fd6b 369 PIRSF PIRSF001259 3 369 3.2E-127 T 11-10-2018 VSVS12_00855 13432a29f6c567f6632eb21fa134fd6b 369 SUPERFAMILY SSF55821 3 202 2.75E-86 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VSVS12_00855 13432a29f6c567f6632eb21fa134fd6b 369 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 198 1.1E-84 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VSVS12_00855 13432a29f6c567f6632eb21fa134fd6b 369 Pfam PF00925 GTP cyclohydrolase II 207 367 6.4E-37 T 11-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VSVS12_00855 13432a29f6c567f6632eb21fa134fd6b 369 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 7 199 1.8E-75 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VSVS12_00855 13432a29f6c567f6632eb21fa134fd6b 369 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 203 38.449 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VSVS12_00855 13432a29f6c567f6632eb21fa134fd6b 369 SUPERFAMILY SSF142695 205 367 2.75E-46 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VSVS12_00036 a02f8fcaec3b1e791e354e829f81353e 306 Gene3D G3DSA:1.10.150.130 13 107 2.6E-18 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal VSVS12_00036 a02f8fcaec3b1e791e354e829f81353e 306 SUPERFAMILY SSF56349 11 297 5.59E-53 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VSVS12_00036 a02f8fcaec3b1e791e354e829f81353e 306 Gene3D G3DSA:1.10.443.10 120 297 6.3E-55 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VSVS12_00036 a02f8fcaec3b1e791e354e829f81353e 306 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 18 305 7.0E-108 T 11-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 VSVS12_00036 a02f8fcaec3b1e791e354e829f81353e 306 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 14 303 54.172 T 11-10-2018 IPR023009 Tyrosine recombinase XerC/XerD VSVS12_00036 a02f8fcaec3b1e791e354e829f81353e 306 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 16 99 2.8E-20 T 11-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 VSVS12_00036 a02f8fcaec3b1e791e354e829f81353e 306 Pfam PF00589 Phage integrase family 121 289 1.6E-48 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VSVS12_00303 9a23d772bf3f783ea45d1e7373feee1a 145 Pfam PF02627 Carboxymuconolactone decarboxylase family 13 93 3.0E-16 T 11-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 VSVS12_00303 9a23d772bf3f783ea45d1e7373feee1a 145 Gene3D G3DSA:1.20.1290.10 1 145 1.6E-43 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 VSVS12_00303 9a23d772bf3f783ea45d1e7373feee1a 145 SUPERFAMILY SSF69118 3 143 2.88E-39 T 11-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 VSVS12_00303 9a23d772bf3f783ea45d1e7373feee1a 145 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 30 78 1.5E-16 T 11-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 VSVS12_02477 6b9267982483e18a0c89add5b64021a0 332 Gene3D G3DSA:3.40.190.10 46 316 5.6E-99 T 11-10-2018 VSVS12_02477 6b9267982483e18a0c89add5b64021a0 332 Gene3D G3DSA:3.40.190.10 131 273 5.6E-99 T 11-10-2018 VSVS12_02477 6b9267982483e18a0c89add5b64021a0 332 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 29 314 4.5E-73 T 11-10-2018 IPR011862 Phosphate binding protein GO:0042301 VSVS12_02477 6b9267982483e18a0c89add5b64021a0 332 SUPERFAMILY SSF53850 45 326 2.99E-65 T 11-10-2018 VSVS12_02477 6b9267982483e18a0c89add5b64021a0 332 Pfam PF12849 PBP superfamily domain 47 301 1.3E-28 T 11-10-2018 IPR024370 PBP domain VSVS12_03319 8db74d638755dc25df64357c23d7788b 208 Pfam PF00929 Exonuclease 11 166 1.7E-29 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VSVS12_03319 8db74d638755dc25df64357c23d7788b 208 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 8 175 1.8E-29 T 11-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VSVS12_03319 8db74d638755dc25df64357c23d7788b 208 Gene3D G3DSA:3.30.420.10 3 177 7.3E-48 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VSVS12_03319 8db74d638755dc25df64357c23d7788b 208 SUPERFAMILY SSF53098 4 178 2.1E-51 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_03319 8db74d638755dc25df64357c23d7788b 208 SMART SM00479 9 176 3.8E-38 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VSVS12_02337 96034166fb29bd7c41fef689f9e661ba 521 Pfam PF00990 Diguanylate cyclase, GGDEF domain 363 517 1.2E-31 T 11-10-2018 IPR000160 GGDEF domain VSVS12_02337 96034166fb29bd7c41fef689f9e661ba 521 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 362 519 4.8E-33 T 11-10-2018 IPR000160 GGDEF domain VSVS12_02337 96034166fb29bd7c41fef689f9e661ba 521 Gene3D G3DSA:3.30.70.270 355 521 1.3E-38 T 11-10-2018 VSVS12_02337 96034166fb29bd7c41fef689f9e661ba 521 SUPERFAMILY SSF55073 366 520 1.49E-32 T 11-10-2018 IPR029787 Nucleotide cyclase VSVS12_02337 96034166fb29bd7c41fef689f9e661ba 521 SMART SM00267 351 521 1.1E-30 T 11-10-2018 IPR000160 GGDEF domain VSVS12_02900 448519c957cfa702f03d9fdbe1d26f1b 75 Pfam PF04102 SlyX 9 75 2.0E-24 T 11-10-2018 IPR007236 SlyX VSVS12_02900 448519c957cfa702f03d9fdbe1d26f1b 75 Hamap MF_00715 Protein SlyX [slyX]. 8 75 17.71 T 11-10-2018 IPR007236 SlyX VSVS12_02900 448519c957cfa702f03d9fdbe1d26f1b 75 Gene3D G3DSA:1.20.5.300 2 51 1.9E-6 T 11-10-2018 VSVS12_04330 b36e8c8cb2edd207006924304ca0ede4 255 SMART SM00342 171 252 3.7E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VSVS12_04330 b36e8c8cb2edd207006924304ca0ede4 255 Pfam PF12833 Helix-turn-helix domain 178 252 1.2E-13 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VSVS12_04330 b36e8c8cb2edd207006924304ca0ede4 255 Gene3D G3DSA:1.10.10.60 151 254 2.6E-20 T 11-10-2018 VSVS12_04330 b36e8c8cb2edd207006924304ca0ede4 255 SUPERFAMILY SSF46689 206 252 2.82E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_02744 c7c283c9fcb1587e111ae8cf9c2214d6 316 SUPERFAMILY SSF51735 122 253 2.45E-29 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_02744 c7c283c9fcb1587e111ae8cf9c2214d6 316 Gene3D G3DSA:3.40.50.720 133 263 2.4E-92 T 11-10-2018 VSVS12_02744 c7c283c9fcb1587e111ae8cf9c2214d6 316 Gene3D G3DSA:3.90.180.10 10 310 2.4E-92 T 11-10-2018 VSVS12_02744 c7c283c9fcb1587e111ae8cf9c2214d6 316 Pfam PF13602 Zinc-binding dehydrogenase 191 312 1.9E-19 T 11-10-2018 VSVS12_02744 c7c283c9fcb1587e111ae8cf9c2214d6 316 SUPERFAMILY SSF50129 4 154 1.83E-34 T 11-10-2018 IPR011032 GroES-like superfamily VSVS12_02744 c7c283c9fcb1587e111ae8cf9c2214d6 316 SMART SM00829 12 312 2.6E-14 T 11-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 VSVS12_02744 c7c283c9fcb1587e111ae8cf9c2214d6 316 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 92 1.8E-8 T 11-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 VSVS12_01989 4a94c0fa36d704e6a791703fe81f8dd2 446 TIGRFAM TIGR00797 matE: MATE efflux family protein 10 410 7.3E-54 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VSVS12_01989 4a94c0fa36d704e6a791703fe81f8dd2 446 Pfam PF01554 MatE 238 399 8.3E-22 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VSVS12_01989 4a94c0fa36d704e6a791703fe81f8dd2 446 Pfam PF01554 MatE 10 175 3.8E-18 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VSVS12_04549 0c8663e79e4f25413717cb67092da351 84 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 1 63 1.1E-5 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VSVS12_04549 0c8663e79e4f25413717cb67092da351 84 Gene3D G3DSA:3.40.50.2300 1 77 9.6E-12 T 11-10-2018 VSVS12_04549 0c8663e79e4f25413717cb67092da351 84 SUPERFAMILY SSF52794 1 78 2.51E-7 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VSVS12_04015 86669687914e2eba472c615f9eff7a4c 158 SUPERFAMILY SSF55729 2 158 2.09E-25 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_04015 86669687914e2eba472c615f9eff7a4c 158 Pfam PF13673 Acetyltransferase (GNAT) domain 37 147 2.2E-14 T 11-10-2018 IPR000182 GNAT domain VSVS12_04015 86669687914e2eba472c615f9eff7a4c 158 Gene3D G3DSA:3.40.630.30 1 156 3.8E-28 T 11-10-2018 VSVS12_01010 ed24010e9c90c9af2a65e0a250d68715 123 PIRSF PIRSF005610 1 118 1.1E-17 T 11-10-2018 IPR007360 Invasion gene expression up-regulator, SirB VSVS12_01010 ed24010e9c90c9af2a65e0a250d68715 123 Pfam PF04247 Invasion gene expression up-regulator, SirB 2 120 7.8E-34 T 11-10-2018 IPR007360 Invasion gene expression up-regulator, SirB VSVS12_01149 1a17098243fa3931b952bf73d66be5fd 248 SMART SM01134 75 225 2.1E-7 T 11-10-2018 VSVS12_01149 1a17098243fa3931b952bf73d66be5fd 248 SUPERFAMILY SSF100950 73 227 3.45E-8 T 11-10-2018 IPR037171 NagB/RpiA transferase-like VSVS12_01149 1a17098243fa3931b952bf73d66be5fd 248 SUPERFAMILY SSF46785 7 46 6.84E-9 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_01149 1a17098243fa3931b952bf73d66be5fd 248 SMART SM00420 1 46 2.6E-7 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VSVS12_01149 1a17098243fa3931b952bf73d66be5fd 248 Pfam PF08220 DeoR-like helix-turn-helix domain 5 47 4.2E-11 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VSVS12_01149 1a17098243fa3931b952bf73d66be5fd 248 Pfam PF00455 DeoR C terminal sensor domain 73 223 1.5E-23 T 11-10-2018 IPR014036 DeoR C-terminal sensor domain VSVS12_01078 dd45e3b4ad1aba26b4193b0205c997d6 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 79 94 9.6E-22 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VSVS12_01078 dd45e3b4ad1aba26b4193b0205c997d6 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 102 115 9.6E-22 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VSVS12_01078 dd45e3b4ad1aba26b4193b0205c997d6 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 120 135 9.6E-22 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VSVS12_01078 dd45e3b4ad1aba26b4193b0205c997d6 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 9.6E-22 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VSVS12_01078 dd45e3b4ad1aba26b4193b0205c997d6 149 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 45 61 9.6E-22 T 11-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 VSVS12_01078 dd45e3b4ad1aba26b4193b0205c997d6 149 SMART SM00226 2 148 5.8E-39 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I VSVS12_01078 dd45e3b4ad1aba26b4193b0205c997d6 149 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 145 1.7E-37 T 11-10-2018 IPR023485 Phosphotyrosine protein phosphatase I VSVS12_01078 dd45e3b4ad1aba26b4193b0205c997d6 149 SUPERFAMILY SSF52788 1 147 1.83E-46 T 11-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily VSVS12_01078 dd45e3b4ad1aba26b4193b0205c997d6 149 Gene3D G3DSA:3.40.50.2300 1 149 2.4E-57 T 11-10-2018 VSVS12_02743 cce9ce706c6eea02b139e4f9830850fe 153 Pfam PF09335 SNARE associated Golgi protein 52 148 5.2E-13 T 11-10-2018 IPR032816 SNARE associated Golgi protein VSVS12_01196 f6631f401bb944e2f475c42ee903b353 556 Gene3D G3DSA:2.40.50.140 445 528 6.4E-20 T 11-10-2018 VSVS12_01196 f6631f401bb944e2f475c42ee903b353 556 Gene3D G3DSA:2.40.50.140 99 178 1.5E-5 T 11-10-2018 VSVS12_01196 f6631f401bb944e2f475c42ee903b353 556 SUPERFAMILY SSF50249 342 440 3.13E-22 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_01196 f6631f401bb944e2f475c42ee903b353 556 PIRSF PIRSF002111 1 534 9.0E-219 T 11-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VSVS12_01196 f6631f401bb944e2f475c42ee903b353 556 SUPERFAMILY SSF50249 190 277 1.86E-26 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_01196 f6631f401bb944e2f475c42ee903b353 556 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 1.4E-229 T 11-10-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 VSVS12_01196 f6631f401bb944e2f475c42ee903b353 556 SUPERFAMILY SSF50249 429 539 2.69E-22 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_01196 f6631f401bb944e2f475c42ee903b353 556 SUPERFAMILY SSF50249 88 174 2.61E-13 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_01196 f6631f401bb944e2f475c42ee903b353 556 PRINTS PR00681 Ribosomal protein S1 signature 155 175 3.4E-97 T 11-10-2018 VSVS12_01196 f6631f401bb944e2f475c42ee903b353 556 PRINTS PR00681 Ribosomal protein S1 signature 108 124 3.4E-97 T 11-10-2018 VSVS12_01196 f6631f401bb944e2f475c42ee903b353 556 PRINTS PR00681 Ribosomal protein S1 signature 21 39 3.4E-97 T 11-10-2018 VSVS12_01196 f6631f401bb944e2f475c42ee903b353 556 PRINTS PR00681 Ribosomal protein S1 signature 126 143 3.4E-97 T 11-10-2018 VSVS12_01196 f6631f401bb944e2f475c42ee903b353 556 PRINTS PR00681 Ribosomal protein S1 signature 330 348 3.4E-97 T 11-10-2018 VSVS12_01196 f6631f401bb944e2f475c42ee903b353 556 PRINTS PR00681 Ribosomal protein S1 signature 212 233 3.4E-97 T 11-10-2018 VSVS12_01196 f6631f401bb944e2f475c42ee903b353 556 PRINTS PR00681 Ribosomal protein S1 signature 290 309 3.4E-97 T 11-10-2018 VSVS12_01196 f6631f401bb944e2f475c42ee903b353 556 PRINTS PR00681 Ribosomal protein S1 signature 39 53 3.4E-97 T 11-10-2018 VSVS12_01196 f6631f401bb944e2f475c42ee903b353 556 PRINTS PR00681 Ribosomal protein S1 signature 84 103 3.4E-97 T 11-10-2018 VSVS12_01196 f6631f401bb944e2f475c42ee903b353 556 Gene3D G3DSA:2.40.50.140 187 268 5.1E-27 T 11-10-2018 VSVS12_01196 f6631f401bb944e2f475c42ee903b353 556 SMART SM00316 19 87 1.0E-4 T 11-10-2018 IPR022967 RNA-binding domain, S1 VSVS12_01196 f6631f401bb944e2f475c42ee903b353 556 SMART SM00316 275 347 8.1E-27 T 11-10-2018 IPR022967 RNA-binding domain, S1 VSVS12_01196 f6631f401bb944e2f475c42ee903b353 556 SMART SM00316 103 171 1.2E-7 T 11-10-2018 IPR022967 RNA-binding domain, S1 VSVS12_01196 f6631f401bb944e2f475c42ee903b353 556 SMART SM00316 362 434 8.6E-21 T 11-10-2018 IPR022967 RNA-binding domain, S1 VSVS12_01196 f6631f401bb944e2f475c42ee903b353 556 SMART SM00316 190 260 8.6E-28 T 11-10-2018 IPR022967 RNA-binding domain, S1 VSVS12_01196 f6631f401bb944e2f475c42ee903b353 556 SMART SM00316 449 520 1.0E-19 T 11-10-2018 IPR022967 RNA-binding domain, S1 VSVS12_01196 f6631f401bb944e2f475c42ee903b353 556 Gene3D G3DSA:2.40.50.140 6 98 2.2E-17 T 11-10-2018 VSVS12_01196 f6631f401bb944e2f475c42ee903b353 556 Gene3D G3DSA:2.40.50.140 358 444 3.4E-23 T 11-10-2018 VSVS12_01196 f6631f401bb944e2f475c42ee903b353 556 Gene3D G3DSA:2.40.50.140 269 357 2.2E-31 T 11-10-2018 VSVS12_01196 f6631f401bb944e2f475c42ee903b353 556 SUPERFAMILY SSF50249 4 112 2.32E-18 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_01196 f6631f401bb944e2f475c42ee903b353 556 Pfam PF00575 S1 RNA binding domain 362 434 9.9E-21 T 11-10-2018 IPR003029 S1 domain GO:0003676 VSVS12_01196 f6631f401bb944e2f475c42ee903b353 556 Pfam PF00575 S1 RNA binding domain 448 520 7.7E-15 T 11-10-2018 IPR003029 S1 domain GO:0003676 VSVS12_01196 f6631f401bb944e2f475c42ee903b353 556 Pfam PF00575 S1 RNA binding domain 275 347 4.1E-21 T 11-10-2018 IPR003029 S1 domain GO:0003676 VSVS12_01196 f6631f401bb944e2f475c42ee903b353 556 Pfam PF00575 S1 RNA binding domain 18 86 1.6E-7 T 11-10-2018 IPR003029 S1 domain GO:0003676 VSVS12_01196 f6631f401bb944e2f475c42ee903b353 556 Pfam PF00575 S1 RNA binding domain 190 260 3.2E-21 T 11-10-2018 IPR003029 S1 domain GO:0003676 VSVS12_01196 f6631f401bb944e2f475c42ee903b353 556 Pfam PF00575 S1 RNA binding domain 103 171 5.9E-8 T 11-10-2018 IPR003029 S1 domain GO:0003676 VSVS12_01196 f6631f401bb944e2f475c42ee903b353 556 SUPERFAMILY SSF50249 255 360 5.79E-28 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_03284 21a5087e5162a8c07c68a0a089fd7f07 558 Pfam PF03961 Flagellar Assembly Protein A 82 542 1.9E-117 T 11-10-2018 IPR005646 Flagellar assembly protein A VSVS12_03391 7b6c7d637baa47c6511016a65712fe1a 474 Pfam PF13484 4Fe-4S double cluster binding domain 346 421 5.6E-12 T 11-10-2018 VSVS12_03391 7b6c7d637baa47c6511016a65712fe1a 474 Pfam PF13486 Reductive dehalogenase subunit 121 330 2.7E-20 T 11-10-2018 IPR028894 Reductive dehalogenase domain VSVS12_03391 7b6c7d637baa47c6511016a65712fe1a 474 Gene3D G3DSA:3.30.70.20 341 422 4.0E-9 T 11-10-2018 VSVS12_03391 7b6c7d637baa47c6511016a65712fe1a 474 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 347 358 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VSVS12_03391 7b6c7d637baa47c6511016a65712fe1a 474 TIGRFAM TIGR02486 RDH: reductive dehalogenase 221 456 3.4E-56 T 11-10-2018 IPR012832 Reductive dehalogenase VSVS12_03391 7b6c7d637baa47c6511016a65712fe1a 474 SUPERFAMILY SSF54862 340 424 3.35E-10 T 11-10-2018 VSVS12_04227 74dfa174b004badc2c370181a8eeaf94 213 Gene3D G3DSA:2.60.370.10 59 195 6.5E-44 T 11-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_04227 74dfa174b004badc2c370181a8eeaf94 213 PIRSF PIRSF005413 1 195 1.6E-67 T 11-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_04227 74dfa174b004badc2c370181a8eeaf94 213 SUPERFAMILY SSF110111 61 180 2.48E-45 T 11-10-2018 IPR023471 Cytochrome c oxidase assembly protein CtaG/Cox11, domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_04227 74dfa174b004badc2c370181a8eeaf94 213 Pfam PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 33 177 1.3E-49 T 11-10-2018 IPR007533 Cytochrome c oxidase assembly protein CtaG/Cox11 GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_03975 202ea57dc26643f0ae182c5dfd1228de 326 SUPERFAMILY SSF46689 221 271 6.72E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_03975 202ea57dc26643f0ae182c5dfd1228de 326 Gene3D G3DSA:1.10.10.60 213 270 1.1E-14 T 11-10-2018 VSVS12_03975 202ea57dc26643f0ae182c5dfd1228de 326 Gene3D G3DSA:1.10.10.60 271 320 3.1E-12 T 11-10-2018 VSVS12_03975 202ea57dc26643f0ae182c5dfd1228de 326 SMART SM00342 237 320 1.2E-26 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VSVS12_03975 202ea57dc26643f0ae182c5dfd1228de 326 Pfam PF12833 Helix-turn-helix domain 243 318 2.7E-21 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VSVS12_03975 202ea57dc26643f0ae182c5dfd1228de 326 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 274 316 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VSVS12_03975 202ea57dc26643f0ae182c5dfd1228de 326 SUPERFAMILY SSF46689 273 319 1.21E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_01759 2119134193201b8caf7b2e15375f71fb 528 Pfam PF05359 Domain of Unknown Function (DUF748) 122 267 1.4E-36 T 11-10-2018 IPR008023 Protein of unknown function DUF748 VSVS12_03727 3b1ea205c3477dc9fafd6e221c39d5f6 726 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 127 717 4.9E-188 T 11-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 VSVS12_03727 3b1ea205c3477dc9fafd6e221c39d5f6 726 Pfam PF02446 4-alpha-glucanotransferase 177 699 8.2E-124 T 11-10-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 VSVS12_03727 3b1ea205c3477dc9fafd6e221c39d5f6 726 SUPERFAMILY SSF51445 162 717 2.11E-144 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily VSVS12_01546 c5481c9aaae268b9401b8c90638faa04 572 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 13 572 57.311 T 11-10-2018 IPR023017 Transport protein YbjL, putative VSVS12_01546 c5481c9aaae268b9401b8c90638faa04 572 Pfam PF02080 TrkA-C domain 321 386 3.5E-9 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VSVS12_01546 c5481c9aaae268b9401b8c90638faa04 572 Pfam PF02080 TrkA-C domain 244 293 2.0E-8 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VSVS12_01546 c5481c9aaae268b9401b8c90638faa04 572 SUPERFAMILY SSF116726 243 297 2.75E-10 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VSVS12_01546 c5481c9aaae268b9401b8c90638faa04 572 SUPERFAMILY SSF116726 306 389 3.66E-10 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VSVS12_01546 c5481c9aaae268b9401b8c90638faa04 572 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 33 184 7.1E-28 T 11-10-2018 IPR006512 YidE/YbjL duplication VSVS12_01546 c5481c9aaae268b9401b8c90638faa04 572 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 405 556 2.1E-37 T 11-10-2018 IPR006512 YidE/YbjL duplication VSVS12_01546 c5481c9aaae268b9401b8c90638faa04 572 Gene3D G3DSA:3.30.70.1450 317 388 2.7E-5 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VSVS12_01546 c5481c9aaae268b9401b8c90638faa04 572 Gene3D G3DSA:3.30.70.1450 241 300 2.4E-9 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VSVS12_01546 c5481c9aaae268b9401b8c90638faa04 572 Pfam PF06826 Predicted Permease Membrane Region 401 568 3.3E-41 T 11-10-2018 IPR006512 YidE/YbjL duplication VSVS12_01546 c5481c9aaae268b9401b8c90638faa04 572 Pfam PF06826 Predicted Permease Membrane Region 29 197 2.6E-36 T 11-10-2018 IPR006512 YidE/YbjL duplication VSVS12_02977 659d41f813d26b8f85192a83b9e648f5 210 Gene3D G3DSA:3.30.420.10 25 200 1.3E-32 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VSVS12_02977 659d41f813d26b8f85192a83b9e648f5 210 SMART SM00479 29 202 1.6E-21 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VSVS12_02977 659d41f813d26b8f85192a83b9e648f5 210 SUPERFAMILY SSF53098 27 198 1.07E-32 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_02977 659d41f813d26b8f85192a83b9e648f5 210 Pfam PF00929 Exonuclease 32 193 6.6E-18 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VSVS12_00633 714b7ca8363bcebd6aa730a0a124bcf4 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 27.476 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00633 714b7ca8363bcebd6aa730a0a124bcf4 103 SUPERFAMILY SSF141091 1 102 1.7E-38 T 11-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00633 714b7ca8363bcebd6aa730a0a124bcf4 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 1.4E-43 T 11-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00633 714b7ca8363bcebd6aa730a0a124bcf4 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 11-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00633 714b7ca8363bcebd6aa730a0a124bcf4 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 4.1E-40 T 11-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02607 ed4098e35dd9707cade7a73453b8f079 680 Gene3D G3DSA:3.20.20.450 424 676 2.1E-94 T 11-10-2018 IPR035919 EAL domain superfamily VSVS12_02607 ed4098e35dd9707cade7a73453b8f079 680 Pfam PF08448 PAS fold 16 119 1.7E-9 T 11-10-2018 IPR013656 PAS fold-4 VSVS12_02607 ed4098e35dd9707cade7a73453b8f079 680 SMART SM00267 243 411 1.3E-53 T 11-10-2018 IPR000160 GGDEF domain VSVS12_02607 ed4098e35dd9707cade7a73453b8f079 680 Gene3D G3DSA:3.30.450.20 3 120 7.5E-12 T 11-10-2018 VSVS12_02607 ed4098e35dd9707cade7a73453b8f079 680 Gene3D G3DSA:3.30.70.270 248 423 3.5E-50 T 11-10-2018 VSVS12_02607 ed4098e35dd9707cade7a73453b8f079 680 SUPERFAMILY SSF55785 124 184 1.74E-5 T 11-10-2018 IPR035965 PAS domain superfamily VSVS12_02607 ed4098e35dd9707cade7a73453b8f079 680 Gene3D G3DSA:3.30.450.20 126 203 3.2E-6 T 11-10-2018 VSVS12_02607 ed4098e35dd9707cade7a73453b8f079 680 SMART SM00091 8 74 6.7E-6 T 11-10-2018 IPR000014 PAS domain VSVS12_02607 ed4098e35dd9707cade7a73453b8f079 680 SMART SM00091 131 198 0.23 T 11-10-2018 IPR000014 PAS domain VSVS12_02607 ed4098e35dd9707cade7a73453b8f079 680 Pfam PF00563 EAL domain 428 662 1.3E-72 T 11-10-2018 IPR001633 EAL domain VSVS12_02607 ed4098e35dd9707cade7a73453b8f079 680 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 252 408 3.4E-37 T 11-10-2018 IPR000160 GGDEF domain VSVS12_02607 ed4098e35dd9707cade7a73453b8f079 680 Pfam PF13188 PAS domain 132 180 5.1E-5 T 11-10-2018 IPR000014 PAS domain VSVS12_02607 ed4098e35dd9707cade7a73453b8f079 680 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 7 119 2.7E-11 T 11-10-2018 IPR000014 PAS domain VSVS12_02607 ed4098e35dd9707cade7a73453b8f079 680 SMART SM00052 421 667 2.0E-106 T 11-10-2018 IPR001633 EAL domain VSVS12_02607 ed4098e35dd9707cade7a73453b8f079 680 SUPERFAMILY SSF141868 428 675 2.22E-84 T 11-10-2018 IPR035919 EAL domain superfamily VSVS12_02607 ed4098e35dd9707cade7a73453b8f079 680 Pfam PF00990 Diguanylate cyclase, GGDEF domain 254 407 1.5E-42 T 11-10-2018 IPR000160 GGDEF domain VSVS12_02607 ed4098e35dd9707cade7a73453b8f079 680 SUPERFAMILY SSF55785 5 115 7.85E-11 T 11-10-2018 IPR035965 PAS domain superfamily VSVS12_02607 ed4098e35dd9707cade7a73453b8f079 680 SUPERFAMILY SSF55073 259 413 9.42E-45 T 11-10-2018 IPR029787 Nucleotide cyclase VSVS12_00467 34efecb142d2a969800ba2da61297422 467 Gene3D G3DSA:2.30.40.10 35 448 2.5E-145 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VSVS12_00467 34efecb142d2a969800ba2da61297422 467 Gene3D G3DSA:3.20.20.140 85 374 2.5E-145 T 11-10-2018 VSVS12_00467 34efecb142d2a969800ba2da61297422 467 SUPERFAMILY SSF51338 27 453 5.16E-37 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VSVS12_00467 34efecb142d2a969800ba2da61297422 467 Pfam PF01979 Amidohydrolase family 81 429 1.5E-66 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VSVS12_00467 34efecb142d2a969800ba2da61297422 467 SUPERFAMILY SSF51556 84 382 4.16E-81 T 11-10-2018 IPR032466 Metal-dependent hydrolase VSVS12_02966 9458738a1d85564cc087273a968d7169 482 Gene3D G3DSA:1.10.40.30 420 469 4.6E-27 T 11-10-2018 VSVS12_02966 9458738a1d85564cc087273a968d7169 482 ProSitePatterns PS00163 Fumarate lyases signature. 329 338 - T 11-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 VSVS12_02966 9458738a1d85564cc087273a968d7169 482 Pfam PF10415 Fumarase C C-terminus 420 472 6.4E-17 T 11-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VSVS12_02966 9458738a1d85564cc087273a968d7169 482 Gene3D G3DSA:1.10.275.10 15 151 1.4E-58 T 11-10-2018 IPR024083 Fumarase/histidase, N-terminal VSVS12_02966 9458738a1d85564cc087273a968d7169 482 SUPERFAMILY SSF48557 13 466 1.05E-141 T 11-10-2018 IPR008948 L-Aspartase-like GO:0003824 VSVS12_02966 9458738a1d85564cc087273a968d7169 482 Pfam PF00206 Lyase 22 354 1.3E-100 T 11-10-2018 IPR022761 Fumarate lyase, N-terminal VSVS12_02966 9458738a1d85564cc087273a968d7169 482 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 15 481 1.3E-249 T 11-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 VSVS12_02966 9458738a1d85564cc087273a968d7169 482 PRINTS PR00149 Fumarate lyase superfamily signature 329 345 2.0E-25 T 11-10-2018 IPR000362 Fumarate lyase family VSVS12_02966 9458738a1d85564cc087273a968d7169 482 PRINTS PR00149 Fumarate lyase superfamily signature 192 210 2.0E-25 T 11-10-2018 IPR000362 Fumarate lyase family VSVS12_02966 9458738a1d85564cc087273a968d7169 482 PRINTS PR00149 Fumarate lyase superfamily signature 283 310 2.0E-25 T 11-10-2018 IPR000362 Fumarate lyase family VSVS12_02966 9458738a1d85564cc087273a968d7169 482 PRINTS PR00149 Fumarate lyase superfamily signature 147 165 2.0E-25 T 11-10-2018 IPR000362 Fumarate lyase family VSVS12_02966 9458738a1d85564cc087273a968d7169 482 Gene3D G3DSA:1.20.200.10 152 419 8.5E-112 T 11-10-2018 VSVS12_03366 c5352d6aa07b4b2481e38c0c2849828d 306 SUPERFAMILY SSF103481 47 146 2.75E-12 T 11-10-2018 VSVS12_03366 c5352d6aa07b4b2481e38c0c2849828d 306 SUPERFAMILY SSF103481 198 292 1.44E-10 T 11-10-2018 VSVS12_03366 c5352d6aa07b4b2481e38c0c2849828d 306 Pfam PF00892 EamA-like transporter family 160 292 2.7E-20 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VSVS12_03366 c5352d6aa07b4b2481e38c0c2849828d 306 Pfam PF00892 EamA-like transporter family 14 146 3.2E-19 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VSVS12_04368 19311b0304f86e8d5dba2b2a6a2aa4c6 138 Pfam PF11742 Protein of unknown function (DUF3302) 3 78 3.2E-40 T 11-10-2018 IPR011223 Uncharacterised conserved protein UCP028770 VSVS12_04368 19311b0304f86e8d5dba2b2a6a2aa4c6 138 PIRSF PIRSF028770 1 127 6.0E-67 T 11-10-2018 IPR011223 Uncharacterised conserved protein UCP028770 VSVS12_01319 75e354e393b5d7dbdcdeb04811fc653d 314 SUPERFAMILY SSF52833 31 149 2.63E-15 T 11-10-2018 IPR036249 Thioredoxin-like superfamily VSVS12_01319 75e354e393b5d7dbdcdeb04811fc653d 314 Pfam PF13409 Glutathione S-transferase, N-terminal domain 56 146 3.7E-21 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VSVS12_01319 75e354e393b5d7dbdcdeb04811fc653d 314 Gene3D G3DSA:1.20.1050.10 171 314 9.6E-72 T 11-10-2018 VSVS12_01319 75e354e393b5d7dbdcdeb04811fc653d 314 Pfam PF13410 Glutathione S-transferase, C-terminal domain 191 263 5.0E-15 T 11-10-2018 VSVS12_01319 75e354e393b5d7dbdcdeb04811fc653d 314 SUPERFAMILY SSF47616 164 312 4.18E-38 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VSVS12_01319 75e354e393b5d7dbdcdeb04811fc653d 314 Gene3D G3DSA:3.40.30.130 1 170 1.1E-63 T 11-10-2018 VSVS12_01319 75e354e393b5d7dbdcdeb04811fc653d 314 PIRSF PIRSF015753 4 312 3.7E-135 T 11-10-2018 IPR016639 Glutathione S-transferase Omega/GSH GO:0004364 VSVS12_01112 8d7a6f8e7e5fbaac843da5bf8fdae091 372 SMART SM00859 3 122 1.0E-22 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VSVS12_01112 8d7a6f8e7e5fbaac843da5bf8fdae091 372 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 144 354 1.3E-57 T 11-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 VSVS12_01112 8d7a6f8e7e5fbaac843da5bf8fdae091 372 SUPERFAMILY SSF55347 134 355 8.73E-78 T 11-10-2018 VSVS12_01112 8d7a6f8e7e5fbaac843da5bf8fdae091 372 SUPERFAMILY SSF51735 1 147 1.91E-49 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_01112 8d7a6f8e7e5fbaac843da5bf8fdae091 372 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 121 1.1E-22 T 11-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 VSVS12_01112 8d7a6f8e7e5fbaac843da5bf8fdae091 372 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 368 32.215 T 11-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VSVS12_01112 8d7a6f8e7e5fbaac843da5bf8fdae091 372 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 2 367 5.0E-186 T 11-10-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VSVS12_01112 8d7a6f8e7e5fbaac843da5bf8fdae091 372 PIRSF PIRSF000148 1 372 1.1E-63 T 11-10-2018 VSVS12_01112 8d7a6f8e7e5fbaac843da5bf8fdae091 372 Gene3D G3DSA:3.40.50.720 4 357 1.6E-145 T 11-10-2018 VSVS12_01112 8d7a6f8e7e5fbaac843da5bf8fdae091 372 Gene3D G3DSA:3.30.360.10 135 351 1.6E-145 T 11-10-2018 VSVS12_01112 8d7a6f8e7e5fbaac843da5bf8fdae091 372 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 262 276 - T 11-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VSVS12_04236 aac1f1aa9301312a71ea013e3def3f9d 104 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 2 99 2.2E-22 T 11-10-2018 IPR008407 Branched-chain amino acid transport, AzlD VSVS12_04134 8ff6fe00c6fedde975e2458bdd8d0020 258 SUPERFAMILY SSF55594 8 88 4.97E-12 T 11-10-2018 IPR035895 HPr-like superfamily VSVS12_04134 8ff6fe00c6fedde975e2458bdd8d0020 258 Gene3D G3DSA:3.40.930.10 105 251 2.2E-16 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VSVS12_04134 8ff6fe00c6fedde975e2458bdd8d0020 258 Gene3D G3DSA:3.30.1340.10 3 89 2.7E-6 T 11-10-2018 IPR035895 HPr-like superfamily VSVS12_04134 8ff6fe00c6fedde975e2458bdd8d0020 258 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 128 251 7.7E-20 T 11-10-2018 IPR002178 PTS EIIA type-2 domain VSVS12_04134 8ff6fe00c6fedde975e2458bdd8d0020 258 PIRSF PIRSF029195 1 258 2.8E-154 T 11-10-2018 IPR016910 Uncharacterised conserved protein UCP029195, PTS-EIIA 2 VSVS12_04134 8ff6fe00c6fedde975e2458bdd8d0020 258 SUPERFAMILY SSF55804 128 249 3.27E-17 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VSVS12_00789 028295d526412d86389228fd4f4e00ab 246 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 29 245 1.8E-61 T 11-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase VSVS12_00789 028295d526412d86389228fd4f4e00ab 246 SUPERFAMILY SSF64438 3 246 2.2E-83 T 11-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic VSVS12_00789 028295d526412d86389228fd4f4e00ab 246 Gene3D G3DSA:3.60.140.10 1 245 1.1E-87 T 11-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily VSVS12_00789 028295d526412d86389228fd4f4e00ab 246 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 19 244 5.0E-73 T 11-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase VSVS12_02048 e81df007965b19c61e73ce3af53d38e1 222 Pfam PF04012 PspA/IM30 family 2 217 2.9E-61 T 11-10-2018 IPR007157 PspA/IM30 VSVS12_02048 e81df007965b19c61e73ce3af53d38e1 222 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 219 5.5E-95 T 11-10-2018 IPR014319 Phage shock protein, PspA VSVS12_02839 c04de4ff2c35be54f9542d1a03b6505e 288 Gene3D G3DSA:2.30.30.60 135 184 4.1E-22 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily VSVS12_02839 c04de4ff2c35be54f9542d1a03b6505e 288 Pfam PF05552 Conserved TM helix 21 69 1.6E-14 T 11-10-2018 IPR008910 Conserved TM helix VSVS12_02839 c04de4ff2c35be54f9542d1a03b6505e 288 Pfam PF00924 Mechanosensitive ion channel 77 274 1.4E-58 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VSVS12_02839 c04de4ff2c35be54f9542d1a03b6505e 288 SUPERFAMILY SSF82861 33 118 2.35E-18 T 11-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 VSVS12_02839 c04de4ff2c35be54f9542d1a03b6505e 288 SUPERFAMILY SSF50182 120 185 1.5E-17 T 11-10-2018 IPR010920 LSM domain superfamily VSVS12_02839 c04de4ff2c35be54f9542d1a03b6505e 288 SUPERFAMILY SSF82689 186 284 5.36E-35 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 VSVS12_02839 c04de4ff2c35be54f9542d1a03b6505e 288 Gene3D G3DSA:3.30.70.100 185 279 8.9E-30 T 11-10-2018 VSVS12_02839 c04de4ff2c35be54f9542d1a03b6505e 288 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 149 183 - T 11-10-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 VSVS12_02198 0ebcb50959183ae2622cef13d773810a 238 SUPERFAMILY SSF55729 4 233 1.85E-87 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_02198 0ebcb50959183ae2622cef13d773810a 238 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 38 205 7.1E-69 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 VSVS12_02198 0ebcb50959183ae2622cef13d773810a 238 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 238 91.068 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 VSVS12_02198 0ebcb50959183ae2622cef13d773810a 238 Gene3D G3DSA:2.30.210.20 4 63 9.9E-26 T 11-10-2018 VSVS12_02198 0ebcb50959183ae2622cef13d773810a 238 Gene3D G3DSA:3.40.630.70 64 238 6.8E-63 T 11-10-2018 VSVS12_02198 0ebcb50959183ae2622cef13d773810a 238 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 34 215 6.5E-78 T 11-10-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 VSVS12_01294 7e55f333a4bc358803ac67c7c3660e02 624 SUPERFAMILY SSF69593 400 614 1.7E-31 T 11-10-2018 VSVS12_01294 7e55f333a4bc358803ac67c7c3660e02 624 Gene3D G3DSA:1.20.1250.20 8 422 1.8E-24 T 11-10-2018 VSVS12_01294 7e55f333a4bc358803ac67c7c3660e02 624 SUPERFAMILY SSF103473 13 424 3.14E-26 T 11-10-2018 IPR036259 MFS transporter superfamily VSVS12_01294 7e55f333a4bc358803ac67c7c3660e02 624 Pfam PF07690 Major Facilitator Superfamily 19 379 7.3E-16 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VSVS12_01294 7e55f333a4bc358803ac67c7c3660e02 624 SMART SM00563 456 570 1.5E-33 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VSVS12_01294 7e55f333a4bc358803ac67c7c3660e02 624 Pfam PF01553 Acyltransferase 441 567 8.9E-25 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VSVS12_00926 c3c63ac010a12dbbaafde58b58299b61 474 Pfam PF01938 TRAM domain 379 440 6.2E-18 T 11-10-2018 IPR002792 TRAM domain VSVS12_00926 c3c63ac010a12dbbaafde58b58299b61 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 72.417 T 11-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 VSVS12_00926 c3c63ac010a12dbbaafde58b58299b61 474 SMART SM00729 147 367 2.6E-63 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VSVS12_00926 c3c63ac010a12dbbaafde58b58299b61 474 SUPERFAMILY SSF102114 120 374 1.31E-61 T 11-10-2018 VSVS12_00926 c3c63ac010a12dbbaafde58b58299b61 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 2.5E-152 T 11-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 VSVS12_00926 c3c63ac010a12dbbaafde58b58299b61 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 11-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 VSVS12_00926 c3c63ac010a12dbbaafde58b58299b61 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 5.1E-29 T 11-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 VSVS12_00926 c3c63ac010a12dbbaafde58b58299b61 474 Gene3D G3DSA:3.40.50.12160 3 139 1.1E-34 T 11-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily VSVS12_00926 c3c63ac010a12dbbaafde58b58299b61 474 Pfam PF04055 Radical SAM superfamily 151 325 5.9E-28 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VSVS12_00926 c3c63ac010a12dbbaafde58b58299b61 474 Gene3D G3DSA:3.80.30.20 145 377 1.0E-82 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VSVS12_00926 c3c63ac010a12dbbaafde58b58299b61 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 1.0E-198 T 11-10-2018 VSVS12_01429 ad4ca50b5504a70520df0281f5c9dab7 538 Gene3D G3DSA:3.50.50.60 85 305 1.3E-88 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_01429 ad4ca50b5504a70520df0281f5c9dab7 538 Gene3D G3DSA:3.50.50.60 468 533 9.0E-15 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_01429 ad4ca50b5504a70520df0281f5c9dab7 538 PIRSF PIRSF038984 1 535 5.0E-237 T 11-10-2018 IPR028348 FAD dependent protein VSVS12_01429 ad4ca50b5504a70520df0281f5c9dab7 538 Gene3D G3DSA:3.30.70.2700 1 80 6.1E-28 T 11-10-2018 VSVS12_01429 ad4ca50b5504a70520df0281f5c9dab7 538 SUPERFAMILY SSF51905 100 528 8.1E-35 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_01790 57392177e150e6c972139b813c870309 828 SUPERFAMILY SSF55073 404 562 1.13E-44 T 11-10-2018 IPR029787 Nucleotide cyclase VSVS12_01790 57392177e150e6c972139b813c870309 828 SMART SM01049 74 167 9.0E-21 T 11-10-2018 IPR033480 Single Cache domain 2 VSVS12_01790 57392177e150e6c972139b813c870309 828 SMART SM01049 213 278 1.4 T 11-10-2018 IPR033480 Single Cache domain 2 VSVS12_01790 57392177e150e6c972139b813c870309 828 SUPERFAMILY SSF141868 575 822 2.88E-84 T 11-10-2018 IPR035919 EAL domain superfamily VSVS12_01790 57392177e150e6c972139b813c870309 828 Pfam PF08269 Cache domain 49 327 5.7E-73 T 11-10-2018 IPR004010 Double Cache domain 2 VSVS12_01790 57392177e150e6c972139b813c870309 828 Gene3D G3DSA:3.30.450.20 221 334 1.7E-21 T 11-10-2018 VSVS12_01790 57392177e150e6c972139b813c870309 828 SMART SM00052 570 816 1.2E-103 T 11-10-2018 IPR001633 EAL domain VSVS12_01790 57392177e150e6c972139b813c870309 828 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 395 559 1.1E-37 T 11-10-2018 IPR000160 GGDEF domain VSVS12_01790 57392177e150e6c972139b813c870309 828 Pfam PF00990 Diguanylate cyclase, GGDEF domain 399 555 1.7E-42 T 11-10-2018 IPR000160 GGDEF domain VSVS12_01790 57392177e150e6c972139b813c870309 828 Gene3D G3DSA:3.20.20.450 574 826 2.3E-88 T 11-10-2018 IPR035919 EAL domain superfamily VSVS12_01790 57392177e150e6c972139b813c870309 828 Gene3D G3DSA:3.30.450.20 68 220 6.4E-35 T 11-10-2018 VSVS12_01790 57392177e150e6c972139b813c870309 828 Pfam PF00563 EAL domain 577 811 4.9E-70 T 11-10-2018 IPR001633 EAL domain VSVS12_01790 57392177e150e6c972139b813c870309 828 Gene3D G3DSA:3.30.70.270 393 573 6.3E-53 T 11-10-2018 VSVS12_01790 57392177e150e6c972139b813c870309 828 SMART SM00267 388 560 1.4E-55 T 11-10-2018 IPR000160 GGDEF domain VSVS12_03772 cb581d046c728bcfc4c5320865f3a347 206 Gene3D G3DSA:1.10.287.110 153 206 2.8E-12 T 11-10-2018 IPR036869 Chaperone J-domain superfamily VSVS12_03772 cb581d046c728bcfc4c5320865f3a347 206 SUPERFAMILY SSF46565 94 204 8.5E-14 T 11-10-2018 IPR036869 Chaperone J-domain superfamily VSVS12_03772 cb581d046c728bcfc4c5320865f3a347 206 Pfam PF00226 DnaJ domain 160 204 1.6E-11 T 11-10-2018 IPR001623 DnaJ domain VSVS12_03772 cb581d046c728bcfc4c5320865f3a347 206 Pfam PF12339 DNA-J related protein 15 137 3.1E-40 T 11-10-2018 IPR021059 DnaJ-related protein, N-terminal VSVS12_03772 cb581d046c728bcfc4c5320865f3a347 206 SMART SM00271 154 205 3.0E-8 T 11-10-2018 IPR001623 DnaJ domain VSVS12_00354 884be9054df0bd19a6028a55e5293df5 330 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 17 306 3.0E-75 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VSVS12_00354 884be9054df0bd19a6028a55e5293df5 330 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 7 313 46.101 T 11-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 VSVS12_00354 884be9054df0bd19a6028a55e5293df5 330 PIRSF PIRSF026649 12 317 1.9E-83 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VSVS12_00354 884be9054df0bd19a6028a55e5293df5 330 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 13 311 4.4E-102 T 11-10-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243 VSVS12_01229 67232a2273a3c9590bd17848a0c6d8dd 372 TIGRFAM TIGR01388 rnd: ribonuclease D 5 371 2.1E-146 T 11-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 VSVS12_01229 67232a2273a3c9590bd17848a0c6d8dd 372 Gene3D G3DSA:1.10.150.80 294 372 2.0E-26 T 11-10-2018 VSVS12_01229 67232a2273a3c9590bd17848a0c6d8dd 372 Pfam PF01612 3'-5' exonuclease 3 171 9.9E-40 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VSVS12_01229 67232a2273a3c9590bd17848a0c6d8dd 372 SUPERFAMILY SSF47819 193 301 2.75E-23 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 VSVS12_01229 67232a2273a3c9590bd17848a0c6d8dd 372 SUPERFAMILY SSF53098 2 210 1.52E-64 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_01229 67232a2273a3c9590bd17848a0c6d8dd 372 SUPERFAMILY SSF47819 296 371 4.91E-21 T 11-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 VSVS12_01229 67232a2273a3c9590bd17848a0c6d8dd 372 Pfam PF00570 HRDC domain 213 279 2.4E-10 T 11-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 VSVS12_01229 67232a2273a3c9590bd17848a0c6d8dd 372 Hamap MF_01899 Ribonuclease D [rnd]. 3 372 43.625 T 11-10-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 VSVS12_01229 67232a2273a3c9590bd17848a0c6d8dd 372 Gene3D G3DSA:1.10.150.80 196 293 1.1E-18 T 11-10-2018 VSVS12_01229 67232a2273a3c9590bd17848a0c6d8dd 372 Gene3D G3DSA:3.30.420.10 1 194 5.2E-67 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VSVS12_01229 67232a2273a3c9590bd17848a0c6d8dd 372 SMART SM00474 3 171 1.3E-43 T 11-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 VSVS12_03877 49a5a5bf2b4ca46ac04d893f79b8e30e 219 SMART SM00862 146 217 2.4E-25 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VSVS12_03877 49a5a5bf2b4ca46ac04d893f79b8e30e 219 Gene3D G3DSA:3.40.50.2300 1 119 5.2E-29 T 11-10-2018 VSVS12_03877 49a5a5bf2b4ca46ac04d893f79b8e30e 219 Pfam PF00072 Response regulator receiver domain 6 112 1.2E-16 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_03877 49a5a5bf2b4ca46ac04d893f79b8e30e 219 SMART SM00448 3 111 5.2E-24 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_03877 49a5a5bf2b4ca46ac04d893f79b8e30e 219 Gene3D G3DSA:1.10.10.10 126 219 5.5E-30 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_03877 49a5a5bf2b4ca46ac04d893f79b8e30e 219 SUPERFAMILY SSF46894 121 217 4.54E-29 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VSVS12_03877 49a5a5bf2b4ca46ac04d893f79b8e30e 219 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 217 1.9E-23 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VSVS12_03877 49a5a5bf2b4ca46ac04d893f79b8e30e 219 SUPERFAMILY SSF52172 4 119 2.7E-28 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_01835 297cd5481eeb4c2f041a803a5c4b5eda 817 Pfam PF02687 FtsX-like permease family 271 368 2.2E-6 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VSVS12_01835 297cd5481eeb4c2f041a803a5c4b5eda 817 Pfam PF02687 FtsX-like permease family 715 809 1.2E-10 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VSVS12_01835 297cd5481eeb4c2f041a803a5c4b5eda 817 Pfam PF12704 MacB-like periplasmic core domain 465 626 1.2E-6 T 11-10-2018 IPR025857 MacB-like periplasmic core domain VSVS12_02842 77a90e480865ae631f62d52cf2c537b8 344 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 153 171 1.9E-29 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02842 77a90e480865ae631f62d52cf2c537b8 344 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 180 196 1.9E-29 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02842 77a90e480865ae631f62d52cf2c537b8 344 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 276 291 1.9E-29 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02842 77a90e480865ae631f62d52cf2c537b8 344 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 116 129 1.9E-29 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02842 77a90e480865ae631f62d52cf2c537b8 344 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 236 253 1.9E-29 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02842 77a90e480865ae631f62d52cf2c537b8 344 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 1 341 65.668 T 11-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 VSVS12_02842 77a90e480865ae631f62d52cf2c537b8 344 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 107 1.8E-31 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02842 77a90e480865ae631f62d52cf2c537b8 344 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 164 320 8.0E-54 T 11-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02842 77a90e480865ae631f62d52cf2c537b8 344 Gene3D G3DSA:3.40.50.720 3 332 1.3E-126 T 11-10-2018 VSVS12_02842 77a90e480865ae631f62d52cf2c537b8 344 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 3 332 3.1E-189 T 11-10-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 VSVS12_02842 77a90e480865ae631f62d52cf2c537b8 344 SMART SM00846 2 159 4.7E-72 T 11-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02842 77a90e480865ae631f62d52cf2c537b8 344 SUPERFAMILY SSF55347 159 321 2.98E-57 T 11-10-2018 VSVS12_02842 77a90e480865ae631f62d52cf2c537b8 344 SUPERFAMILY SSF51735 2 185 4.11E-50 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_02842 77a90e480865ae631f62d52cf2c537b8 344 PIRSF PIRSF000149 1 342 5.7E-125 T 11-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02842 77a90e480865ae631f62d52cf2c537b8 344 Gene3D G3DSA:3.30.360.10 158 322 1.3E-126 T 11-10-2018 VSVS12_00708 e70ffdaee6bdc1bfffafe3b6abed1f4d 328 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 325 4.8E-41 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VSVS12_00708 e70ffdaee6bdc1bfffafe3b6abed1f4d 328 Gene3D G3DSA:1.10.3720.10 88 327 3.0E-18 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_00708 e70ffdaee6bdc1bfffafe3b6abed1f4d 328 SUPERFAMILY SSF161098 94 324 2.94E-15 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_00046 b667354e62a658589c873768c667fca6 110 SUPERFAMILY SSF46626 10 109 4.09E-17 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VSVS12_00046 b667354e62a658589c873768c667fca6 110 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 26 105 1.2E-14 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_00046 b667354e62a658589c873768c667fca6 110 Gene3D G3DSA:1.10.760.10 18 110 5.2E-16 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VSVS12_01202 f5f971ee1075d23b9c142ebc7cfe8f79 324 SUPERFAMILY SSF53850 91 322 8.24E-40 T 11-10-2018 VSVS12_01202 f5f971ee1075d23b9c142ebc7cfe8f79 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 1.2E-15 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_01202 f5f971ee1075d23b9c142ebc7cfe8f79 324 Gene3D G3DSA:3.40.190.10 93 303 3.5E-96 T 11-10-2018 VSVS12_01202 f5f971ee1075d23b9c142ebc7cfe8f79 324 Pfam PF03466 LysR substrate binding domain 91 287 4.1E-38 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_01202 f5f971ee1075d23b9c142ebc7cfe8f79 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 9.5E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_01202 f5f971ee1075d23b9c142ebc7cfe8f79 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 9.5E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_01202 f5f971ee1075d23b9c142ebc7cfe8f79 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 9.5E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_01202 f5f971ee1075d23b9c142ebc7cfe8f79 324 Gene3D G3DSA:3.40.190.10 167 267 3.5E-96 T 11-10-2018 VSVS12_01202 f5f971ee1075d23b9c142ebc7cfe8f79 324 Gene3D G3DSA:1.10.10.10 1 86 3.9E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_01202 f5f971ee1075d23b9c142ebc7cfe8f79 324 SUPERFAMILY SSF46785 1 87 9.25E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_03858 90026f0322c6276812018dba0d71a837 323 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 12 315 4.0E-101 T 11-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 VSVS12_03858 90026f0322c6276812018dba0d71a837 323 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 46 70 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VSVS12_03858 90026f0322c6276812018dba0d71a837 323 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 12 316 2.3E-102 T 11-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 VSVS12_03858 90026f0322c6276812018dba0d71a837 323 Pfam PF00294 pfkB family carbohydrate kinase 31 299 3.0E-48 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB VSVS12_03858 90026f0322c6276812018dba0d71a837 323 SUPERFAMILY SSF53613 13 299 4.37E-67 T 11-10-2018 IPR029056 Ribokinase-like VSVS12_03858 90026f0322c6276812018dba0d71a837 323 PIRSF PIRSF000535 9 318 1.4E-92 T 11-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 VSVS12_03858 90026f0322c6276812018dba0d71a837 323 Gene3D G3DSA:3.40.1190.20 9 318 5.6E-93 T 11-10-2018 IPR029056 Ribokinase-like VSVS12_04536 50aca7695f685f19535e96846bee43ce 168 Pfam PF13614 AAA domain 27 126 2.1E-11 T 11-10-2018 IPR025669 AAA domain VSVS12_04536 50aca7695f685f19535e96846bee43ce 168 Gene3D G3DSA:3.40.50.300 27 166 5.1E-22 T 11-10-2018 VSVS12_04536 50aca7695f685f19535e96846bee43ce 168 SUPERFAMILY SSF52540 14 159 5.78E-15 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_04387 ca59a44112164782e8d4d0dfb08b005e 123 Pfam PF13384 Homeodomain-like domain 24 63 1.0E-7 T 11-10-2018 VSVS12_04387 ca59a44112164782e8d4d0dfb08b005e 123 SUPERFAMILY SSF46689 12 123 9.86E-22 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_04513 ca59a44112164782e8d4d0dfb08b005e 123 Pfam PF13384 Homeodomain-like domain 24 63 1.0E-7 T 11-10-2018 VSVS12_04513 ca59a44112164782e8d4d0dfb08b005e 123 SUPERFAMILY SSF46689 12 123 9.86E-22 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_02687 b11d4660fc2fd68b9f99fa9fb0b60bf2 332 Gene3D G3DSA:3.40.50.2300 55 306 3.2E-64 T 11-10-2018 VSVS12_02687 b11d4660fc2fd68b9f99fa9fb0b60bf2 332 Pfam PF13377 Periplasmic binding protein-like domain 168 326 4.2E-31 T 11-10-2018 VSVS12_02687 b11d4660fc2fd68b9f99fa9fb0b60bf2 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 7.1E-5 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VSVS12_02687 b11d4660fc2fd68b9f99fa9fb0b60bf2 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 7.1E-5 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VSVS12_02687 b11d4660fc2fd68b9f99fa9fb0b60bf2 332 SUPERFAMILY SSF53822 61 326 7.85E-66 T 11-10-2018 IPR028082 Periplasmic binding protein-like I VSVS12_02687 b11d4660fc2fd68b9f99fa9fb0b60bf2 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 7.3E-19 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VSVS12_02687 b11d4660fc2fd68b9f99fa9fb0b60bf2 332 SUPERFAMILY SSF47413 2 59 1.36E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VSVS12_02687 b11d4660fc2fd68b9f99fa9fb0b60bf2 332 Gene3D G3DSA:3.40.50.2300 160 289 3.2E-64 T 11-10-2018 VSVS12_02687 b11d4660fc2fd68b9f99fa9fb0b60bf2 332 SMART SM00354 1 71 1.7E-29 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VSVS12_02687 b11d4660fc2fd68b9f99fa9fb0b60bf2 332 Gene3D G3DSA:1.10.260.40 1 54 8.6E-23 T 11-10-2018 VSVS12_04257 520992e697151f28d39e584f8ad36447 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 67 3.4E-29 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VSVS12_04257 520992e697151f28d39e584f8ad36447 69 Gene3D G3DSA:2.40.50.140 4 68 2.3E-29 T 11-10-2018 VSVS12_04257 520992e697151f28d39e584f8ad36447 69 PRINTS PR00050 Cold shock protein signature 7 22 3.8E-17 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VSVS12_04257 520992e697151f28d39e584f8ad36447 69 PRINTS PR00050 Cold shock protein signature 42 60 3.8E-17 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VSVS12_04257 520992e697151f28d39e584f8ad36447 69 PRINTS PR00050 Cold shock protein signature 27 36 3.8E-17 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VSVS12_04257 520992e697151f28d39e584f8ad36447 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 36 - T 11-10-2018 IPR019844 Cold-shock conserved site VSVS12_04257 520992e697151f28d39e584f8ad36447 69 PIRSF PIRSF002599 1 69 9.9E-24 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 VSVS12_04257 520992e697151f28d39e584f8ad36447 69 SMART SM00357 6 69 1.3E-29 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 VSVS12_04257 520992e697151f28d39e584f8ad36447 69 SUPERFAMILY SSF50249 4 68 4.65E-24 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_03122 839b273a2a2c3138b2e56c886566c95d 218 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 21 215 2.3E-22 T 11-10-2018 IPR006214 Bax inhibitor 1-related VSVS12_00362 2753a441736e39353fb8022f39c2a00b 548 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 3.7E-97 T 11-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 VSVS12_00362 2753a441736e39353fb8022f39c2a00b 548 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 527 5.9E-254 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VSVS12_00362 2753a441736e39353fb8022f39c2a00b 548 Gene3D G3DSA:3.30.260.10 136 410 6.2E-238 T 11-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily VSVS12_00362 2753a441736e39353fb8022f39c2a00b 548 Gene3D G3DSA:3.50.7.10 192 372 6.2E-238 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily VSVS12_00362 2753a441736e39353fb8022f39c2a00b 548 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VSVS12_00362 2753a441736e39353fb8022f39c2a00b 548 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VSVS12_00362 2753a441736e39353fb8022f39c2a00b 548 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VSVS12_00362 2753a441736e39353fb8022f39c2a00b 548 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VSVS12_00362 2753a441736e39353fb8022f39c2a00b 548 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VSVS12_00362 2753a441736e39353fb8022f39c2a00b 548 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 11-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VSVS12_00362 2753a441736e39353fb8022f39c2a00b 548 SUPERFAMILY SSF52029 185 376 2.69E-83 T 11-10-2018 IPR027409 GroEL-like apical domain superfamily VSVS12_00362 2753a441736e39353fb8022f39c2a00b 548 SUPERFAMILY SSF48592 3 230 3.66E-65 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily VSVS12_00362 2753a441736e39353fb8022f39c2a00b 548 SUPERFAMILY SSF48592 373 525 5.04E-32 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily VSVS12_00362 2753a441736e39353fb8022f39c2a00b 548 Hamap MF_00600 60 kDa chaperonin [groL]. 2 547 41.49 T 11-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 VSVS12_00362 2753a441736e39353fb8022f39c2a00b 548 Gene3D G3DSA:1.10.560.10 8 521 6.2E-238 T 11-10-2018 IPR027413 GroEL-like equatorial domain superfamily VSVS12_02506 ae230b8817cfda4c39a1d94063deede1 381 Pfam PF02417 Chromate transporter 3 168 2.1E-34 T 11-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 VSVS12_02506 ae230b8817cfda4c39a1d94063deede1 381 Pfam PF02417 Chromate transporter 212 374 1.4E-35 T 11-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 VSVS12_02506 ae230b8817cfda4c39a1d94063deede1 381 PIRSF PIRSF004810 1 381 4.1E-119 T 11-10-2018 IPR014047 Chromate transporter, long chain VSVS12_02506 ae230b8817cfda4c39a1d94063deede1 381 TIGRFAM TIGR00937 2A51: chromate efflux transporter 8 374 1.9E-93 T 11-10-2018 IPR014047 Chromate transporter, long chain VSVS12_00931 de0a34375ffed69d7c7ae0db40a67ed8 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 1.2E-26 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like VSVS12_00931 de0a34375ffed69d7c7ae0db40a67ed8 85 SUPERFAMILY SSF55594 1 82 3.01E-26 T 11-10-2018 IPR035895 HPr-like superfamily VSVS12_00931 de0a34375ffed69d7c7ae0db40a67ed8 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 11-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site VSVS12_00931 de0a34375ffed69d7c7ae0db40a67ed8 85 Gene3D G3DSA:3.30.1340.10 1 85 5.4E-32 T 11-10-2018 IPR035895 HPr-like superfamily VSVS12_00931 de0a34375ffed69d7c7ae0db40a67ed8 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 3.8E-17 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like VSVS12_00931 de0a34375ffed69d7c7ae0db40a67ed8 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 3.8E-17 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like VSVS12_00931 de0a34375ffed69d7c7ae0db40a67ed8 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 3.8E-17 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like VSVS12_00931 de0a34375ffed69d7c7ae0db40a67ed8 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 3.6E-27 T 11-10-2018 IPR000032 Phosphocarrier protein HPr-like VSVS12_00931 de0a34375ffed69d7c7ae0db40a67ed8 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 11-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site VSVS12_00538 c53f9c6f40c7e95428d77d50fe081679 95 Gene3D G3DSA:3.30.160.100 1 95 1.5E-38 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like VSVS12_00538 c53f9c6f40c7e95428d77d50fe081679 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 2.5E-28 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 VSVS12_00538 c53f9c6f40c7e95428d77d50fe081679 95 SUPERFAMILY SSF69754 1 95 3.01E-35 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like VSVS12_00538 c53f9c6f40c7e95428d77d50fe081679 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 6.8E-34 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 VSVS12_02343 ce8b482d1229b3f921d598bdd0d00d7d 210 Pfam PF12697 Alpha/beta hydrolase family 16 135 2.8E-6 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VSVS12_02343 ce8b482d1229b3f921d598bdd0d00d7d 210 SUPERFAMILY SSF53474 9 179 1.12E-25 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold VSVS12_02343 ce8b482d1229b3f921d598bdd0d00d7d 210 Gene3D G3DSA:3.40.50.1820 13 184 1.1E-26 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold VSVS12_03666 c39b700e518c2638467acbe1917e7d5f 402 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 1.2E-23 T 11-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 VSVS12_03666 c39b700e518c2638467acbe1917e7d5f 402 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 192 399 5.7E-71 T 11-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 VSVS12_03666 c39b700e518c2638467acbe1917e7d5f 402 Pfam PF07670 Nucleoside recognition 90 185 1.9E-6 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VSVS12_03666 c39b700e518c2638467acbe1917e7d5f 402 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 399 2.1E-137 T 11-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 VSVS12_02241 81fbc89f1d373488d9ee9198803f14a9 161 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 146 32.379 T 11-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 VSVS12_02241 81fbc89f1d373488d9ee9198803f14a9 161 SUPERFAMILY SSF82093 30 142 6.8E-39 T 11-10-2018 IPR036127 CcmE-like superfamily GO:0005886|GO:0017003|GO:0017004 VSVS12_02241 81fbc89f1d373488d9ee9198803f14a9 161 Pfam PF03100 CcmE 4 136 2.4E-45 T 11-10-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004|GO:0020037 VSVS12_02241 81fbc89f1d373488d9ee9198803f14a9 161 Gene3D G3DSA:2.40.50.140 30 142 3.5E-39 T 11-10-2018 VSVS12_00001 f10e9046178ef4022d39111ef1e8f1aa 234 SUPERFAMILY SSF55424 113 231 4.98E-31 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VSVS12_00001 f10e9046178ef4022d39111ef1e8f1aa 234 SUPERFAMILY SSF51905 3 104 9.73E-23 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_00001 f10e9046178ef4022d39111ef1e8f1aa 234 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 59 81 9.3E-8 T 11-10-2018 VSVS12_00001 f10e9046178ef4022d39111ef1e8f1aa 234 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 30 46 9.3E-8 T 11-10-2018 VSVS12_00001 f10e9046178ef4022d39111ef1e8f1aa 234 Gene3D G3DSA:3.50.50.60 40 96 9.5E-26 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_00001 f10e9046178ef4022d39111ef1e8f1aa 234 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 94 2.4E-18 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VSVS12_00001 f10e9046178ef4022d39111ef1e8f1aa 234 Gene3D G3DSA:3.30.390.30 113 232 4.3E-33 T 11-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 VSVS12_00001 f10e9046178ef4022d39111ef1e8f1aa 234 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 31 45 1.3E-21 T 11-10-2018 VSVS12_00001 f10e9046178ef4022d39111ef1e8f1aa 234 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 200 220 1.3E-21 T 11-10-2018 VSVS12_00001 f10e9046178ef4022d39111ef1e8f1aa 234 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 74 81 1.3E-21 T 11-10-2018 VSVS12_00001 f10e9046178ef4022d39111ef1e8f1aa 234 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 110 131 1.3E-21 T 11-10-2018 VSVS12_00001 f10e9046178ef4022d39111ef1e8f1aa 234 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 175 190 1.3E-21 T 11-10-2018 VSVS12_00001 f10e9046178ef4022d39111ef1e8f1aa 234 Gene3D G3DSA:3.50.50.60 3 39 9.5E-26 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_00001 f10e9046178ef4022d39111ef1e8f1aa 234 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 114 225 2.3E-30 T 11-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 VSVS12_01609 754ea14a6bfff333310f70295e304284 595 Pfam PF08439 Oligopeptidase F 112 173 3.4E-5 T 11-10-2018 IPR013647 Oligopeptidase F, N-terminal domain VSVS12_01609 754ea14a6bfff333310f70295e304284 595 Pfam PF01432 Peptidase family M3 259 576 2.3E-22 T 11-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 VSVS12_01609 754ea14a6bfff333310f70295e304284 595 Gene3D G3DSA:1.10.1370.20 215 594 1.4E-107 T 11-10-2018 VSVS12_01609 754ea14a6bfff333310f70295e304284 595 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 5 590 7.9E-202 T 11-10-2018 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 VSVS12_01609 754ea14a6bfff333310f70295e304284 595 SUPERFAMILY SSF55486 6 577 2.01E-85 T 11-10-2018 VSVS12_01302 fe2058109a172551f27dff46e6c9e3e4 102 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 6 85 2.2E-24 T 11-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 VSVS12_01302 fe2058109a172551f27dff46e6c9e3e4 102 SUPERFAMILY SSF46767 4 86 1.11E-25 T 11-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 VSVS12_01302 fe2058109a172551f27dff46e6c9e3e4 102 Gene3D G3DSA:1.10.10.10 3 102 2.1E-39 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_03323 efe6f0087d4ead8ca34ec31599360b9a 135 Pfam PF03061 Thioesterase superfamily 50 117 2.0E-7 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 VSVS12_03323 efe6f0087d4ead8ca34ec31599360b9a 135 Gene3D G3DSA:3.10.129.10 3 134 4.6E-24 T 11-10-2018 VSVS12_03323 efe6f0087d4ead8ca34ec31599360b9a 135 SUPERFAMILY SSF54637 8 130 1.52E-25 T 11-10-2018 IPR029069 HotDog domain superfamily VSVS12_02091 b928bdf212c92b0e5ec2b649ffb6e18e 182 Gene3D G3DSA:1.20.1270.340 1 99 1.7E-14 T 11-10-2018 IPR038338 PriB/PriC superfamily VSVS12_02091 b928bdf212c92b0e5ec2b649ffb6e18e 182 Pfam PF07445 Primosomal replication protein priC 6 179 6.8E-50 T 11-10-2018 IPR010890 Primosomal replication PriB/PriC VSVS12_00512 3728e5ab2f1ccb62491e00ed62e5c907 326 Gene3D G3DSA:3.20.20.70 3 245 3.8E-73 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_00512 3728e5ab2f1ccb62491e00ed62e5c907 326 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 1 322 52.412 T 11-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 VSVS12_00512 3728e5ab2f1ccb62491e00ed62e5c907 326 PIRSF PIRSF006621 1 324 1.3E-74 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VSVS12_00512 3728e5ab2f1ccb62491e00ed62e5c907 326 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 87 105 - T 11-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 VSVS12_00512 3728e5ab2f1ccb62491e00ed62e5c907 326 SUPERFAMILY SSF51395 6 318 3.5E-74 T 11-10-2018 VSVS12_00512 3728e5ab2f1ccb62491e00ed62e5c907 326 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 6 320 7.2E-157 T 11-10-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 VSVS12_00512 3728e5ab2f1ccb62491e00ed62e5c907 326 Gene3D G3DSA:1.20.120.1460 246 325 1.8E-22 T 11-10-2018 VSVS12_00512 3728e5ab2f1ccb62491e00ed62e5c907 326 Pfam PF01207 Dihydrouridine synthase (Dus) 9 317 1.7E-93 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VSVS12_02852 23676f64f5658b37b2c9ec6b6a24f6f9 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 187 39.379 T 11-10-2018 IPR003774 Protein of unknown function UPF0301 VSVS12_02852 23676f64f5658b37b2c9ec6b6a24f6f9 187 SUPERFAMILY SSF143456 1 187 6.93E-66 T 11-10-2018 VSVS12_02852 23676f64f5658b37b2c9ec6b6a24f6f9 187 Pfam PF02622 Uncharacterized ACR, COG1678 12 174 1.6E-50 T 11-10-2018 IPR003774 Protein of unknown function UPF0301 VSVS12_02852 23676f64f5658b37b2c9ec6b6a24f6f9 187 Gene3D G3DSA:3.40.1740.10 1 187 4.8E-69 T 11-10-2018 VSVS12_00725 3ed9e668dca894b744710252e2e6999f 209 SUPERFAMILY SSF53335 30 209 5.57E-43 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_00725 3ed9e668dca894b744710252e2e6999f 209 Gene3D G3DSA:3.40.50.150 30 209 6.0E-61 T 11-10-2018 VSVS12_00725 3ed9e668dca894b744710252e2e6999f 209 Pfam PF01728 FtsJ-like methyltransferase 31 207 9.9E-58 T 11-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 VSVS12_00725 3ed9e668dca894b744710252e2e6999f 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 15 208 28.559 T 11-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 VSVS12_00725 3ed9e668dca894b744710252e2e6999f 209 PIRSF PIRSF005461 1 209 2.2E-81 T 11-10-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 VSVS12_00909 147852b6aa76022ef365d824ba09ca6f 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 153.515 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VSVS12_00909 147852b6aa76022ef365d824ba09ca6f 321 SUPERFAMILY SSF102114 52 314 3.01E-65 T 11-10-2018 VSVS12_00909 147852b6aa76022ef365d824ba09ca6f 321 PIRSF PIRSF005963 1 319 3.5E-129 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VSVS12_00909 147852b6aa76022ef365d824ba09ca6f 321 Pfam PF04055 Radical SAM superfamily 91 252 1.1E-17 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VSVS12_00909 147852b6aa76022ef365d824ba09ca6f 321 SMART SM00729 84 293 1.6E-16 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VSVS12_00909 147852b6aa76022ef365d824ba09ca6f 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 25 73 1.7E-8 T 11-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VSVS12_00909 147852b6aa76022ef365d824ba09ca6f 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 319 8.8E-149 T 11-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VSVS12_00909 147852b6aa76022ef365d824ba09ca6f 321 Gene3D G3DSA:3.20.20.70 48 293 3.3E-22 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_02899 e8a6178c28b34f25990c26a23eeb89dd 325 Gene3D G3DSA:2.130.10.10 247 325 2.3E-5 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VSVS12_02899 e8a6178c28b34f25990c26a23eeb89dd 325 Gene3D G3DSA:2.130.10.10 19 246 5.2E-33 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VSVS12_02899 e8a6178c28b34f25990c26a23eeb89dd 325 SUPERFAMILY SSF50969 27 284 7.45E-43 T 11-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like VSVS12_02899 e8a6178c28b34f25990c26a23eeb89dd 325 ProSitePatterns PS00678 Trp-Asp (WD) repeats signature. 176 190 - T 11-10-2018 IPR019775 WD40 repeat, conserved site VSVS12_02899 e8a6178c28b34f25990c26a23eeb89dd 325 Pfam PF00400 WD domain, G-beta repeat 193 230 0.16 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 VSVS12_02899 e8a6178c28b34f25990c26a23eeb89dd 325 Pfam PF00400 WD domain, G-beta repeat 157 189 8.4E-5 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 VSVS12_02899 e8a6178c28b34f25990c26a23eeb89dd 325 SMART SM00320 192 230 0.0011 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 VSVS12_02899 e8a6178c28b34f25990c26a23eeb89dd 325 SMART SM00320 151 189 6.7E-6 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 VSVS12_02899 e8a6178c28b34f25990c26a23eeb89dd 325 SMART SM00320 285 323 69.0 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 VSVS12_02899 e8a6178c28b34f25990c26a23eeb89dd 325 SMART SM00320 25 62 320.0 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 VSVS12_02899 e8a6178c28b34f25990c26a23eeb89dd 325 SMART SM00320 65 106 95.0 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 VSVS12_02899 e8a6178c28b34f25990c26a23eeb89dd 325 SMART SM00320 233 274 0.84 T 11-10-2018 IPR001680 WD40 repeat GO:0005515 VSVS12_00414 424a29c1e9b1cfd5133a5f76eeeb0a51 252 SUPERFAMILY SSF54292 5 106 4.45E-30 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VSVS12_00414 424a29c1e9b1cfd5133a5f76eeeb0a51 252 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VSVS12_00414 424a29c1e9b1cfd5133a5f76eeeb0a51 252 Pfam PF13183 4Fe-4S dicluster domain 147 219 1.2E-10 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VSVS12_00414 424a29c1e9b1cfd5133a5f76eeeb0a51 252 SUPERFAMILY SSF46548 107 226 2.62E-30 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VSVS12_00414 424a29c1e9b1cfd5133a5f76eeeb0a51 252 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 111 2.3E-33 T 11-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 VSVS12_00414 424a29c1e9b1cfd5133a5f76eeeb0a51 252 Gene3D G3DSA:3.10.20.30 1 106 1.4E-35 T 11-10-2018 IPR012675 Beta-grasp domain superfamily VSVS12_00414 424a29c1e9b1cfd5133a5f76eeeb0a51 252 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 11-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 VSVS12_00414 424a29c1e9b1cfd5133a5f76eeeb0a51 252 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 1.1E-95 T 11-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 VSVS12_00414 424a29c1e9b1cfd5133a5f76eeeb0a51 252 Gene3D G3DSA:1.10.1060.10 107 244 4.4E-50 T 11-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 VSVS12_00330 8c445bd9207e1c56cfe05e9cfcbeb710 78 SUPERFAMILY SSF143800 2 76 5.49E-30 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00330 8c445bd9207e1c56cfe05e9cfcbeb710 78 Gene3D G3DSA:2.30.170.40 2 78 1.1E-32 T 11-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00330 8c445bd9207e1c56cfe05e9cfcbeb710 78 Pfam PF00830 Ribosomal L28 family 3 62 5.0E-26 T 11-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00330 8c445bd9207e1c56cfe05e9cfcbeb710 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 58 6.8E-27 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00330 8c445bd9207e1c56cfe05e9cfcbeb710 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.292 T 11-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_03702 dec7f768519a39215cd49cae04c04929 463 Gene3D G3DSA:3.30.70.270 281 450 2.9E-46 T 11-10-2018 VSVS12_03702 dec7f768519a39215cd49cae04c04929 463 SUPERFAMILY SSF53850 27 245 1.34E-36 T 11-10-2018 VSVS12_03702 dec7f768519a39215cd49cae04c04929 463 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 244 6.6E-29 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VSVS12_03702 dec7f768519a39215cd49cae04c04929 463 Gene3D G3DSA:3.40.190.10 111 207 1.7E-38 T 11-10-2018 VSVS12_03702 dec7f768519a39215cd49cae04c04929 463 SMART SM00267 285 449 3.8E-46 T 11-10-2018 IPR000160 GGDEF domain VSVS12_03702 dec7f768519a39215cd49cae04c04929 463 SUPERFAMILY SSF55073 301 448 3.92E-38 T 11-10-2018 IPR029787 Nucleotide cyclase VSVS12_03702 dec7f768519a39215cd49cae04c04929 463 SMART SM00062 26 248 5.2E-8 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VSVS12_03702 dec7f768519a39215cd49cae04c04929 463 Gene3D G3DSA:3.40.190.10 23 244 1.7E-38 T 11-10-2018 VSVS12_03702 dec7f768519a39215cd49cae04c04929 463 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 295 448 1.3E-37 T 11-10-2018 IPR000160 GGDEF domain VSVS12_03702 dec7f768519a39215cd49cae04c04929 463 Pfam PF00990 Diguanylate cyclase, GGDEF domain 297 444 5.2E-37 T 11-10-2018 IPR000160 GGDEF domain VSVS12_00314 e10a5e9e679f98a3db774379239a70c4 227 Gene3D G3DSA:3.40.1280.10 1 204 2.2E-58 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VSVS12_00314 e10a5e9e679f98a3db774379239a70c4 227 Hamap MF_02060 tRNA (guanosine(18)-2'-O)-methyltransferase [trmH]. 2 196 34.465 T 11-10-2018 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase GO:0008168|GO:0030488 VSVS12_00314 e10a5e9e679f98a3db774379239a70c4 227 Pfam PF00588 SpoU rRNA Methylase family 20 158 5.2E-34 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VSVS12_00314 e10a5e9e679f98a3db774379239a70c4 227 SUPERFAMILY SSF75217 4 176 4.77E-45 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases VSVS12_00314 e10a5e9e679f98a3db774379239a70c4 227 Pfam PF12105 SpoU, rRNA methylase, C-terminal 162 217 6.3E-25 T 11-10-2018 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 VSVS12_03821 c2095b3add961b57a64a9a9777771202 115 PIRSF PIRSF028226 1 115 2.8E-55 T 11-10-2018 IPR014176 Phasin, subfamily 3 VSVS12_03821 c2095b3add961b57a64a9a9777771202 115 Pfam PF09361 Phasin protein 8 108 1.8E-19 T 11-10-2018 IPR018968 Phasin VSVS12_03821 c2095b3add961b57a64a9a9777771202 115 TIGRFAM TIGR02809 phasin_3: phasin family protein 4 113 1.2E-54 T 11-10-2018 IPR014176 Phasin, subfamily 3 VSVS12_03375 2c1c6009bb2bf0baeff02be2f109579b 647 Pfam PF17152 Periplasmic sensor domain 44 142 2.9E-11 T 11-10-2018 IPR033417 Periplasmic sensor domain CHASE8 VSVS12_03375 2c1c6009bb2bf0baeff02be2f109579b 647 Gene3D G3DSA:3.30.450.20 238 363 1.1E-6 T 11-10-2018 VSVS12_03375 2c1c6009bb2bf0baeff02be2f109579b 647 SUPERFAMILY SSF158472 180 230 2.35E-5 T 11-10-2018 VSVS12_03375 2c1c6009bb2bf0baeff02be2f109579b 647 SUPERFAMILY SSF55073 481 631 3.3E-38 T 11-10-2018 IPR029787 Nucleotide cyclase VSVS12_03375 2c1c6009bb2bf0baeff02be2f109579b 647 Gene3D G3DSA:3.30.70.270 470 643 1.9E-47 T 11-10-2018 VSVS12_03375 2c1c6009bb2bf0baeff02be2f109579b 647 Gene3D G3DSA:1.20.1480.50 146 237 4.3E-7 T 11-10-2018 VSVS12_03375 2c1c6009bb2bf0baeff02be2f109579b 647 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 473 630 4.6E-30 T 11-10-2018 IPR000160 GGDEF domain VSVS12_03375 2c1c6009bb2bf0baeff02be2f109579b 647 SMART SM00304 180 233 9.4E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_03375 2c1c6009bb2bf0baeff02be2f109579b 647 Pfam PF13426 PAS domain 403 464 0.84 T 11-10-2018 IPR000014 PAS domain VSVS12_03375 2c1c6009bb2bf0baeff02be2f109579b 647 Pfam PF13426 PAS domain 259 351 0.021 T 11-10-2018 IPR000014 PAS domain VSVS12_03375 2c1c6009bb2bf0baeff02be2f109579b 647 Pfam PF00990 Diguanylate cyclase, GGDEF domain 476 627 8.1E-39 T 11-10-2018 IPR000160 GGDEF domain VSVS12_03375 2c1c6009bb2bf0baeff02be2f109579b 647 SMART SM00267 465 631 1.7E-40 T 11-10-2018 IPR000160 GGDEF domain VSVS12_00388 f4fcf8e0127ac15f261864963d37bb64 253 SUPERFAMILY SSF51366 1 232 1.48E-55 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VSVS12_00388 f4fcf8e0127ac15f261864963d37bb64 253 Gene3D G3DSA:3.20.20.70 1 241 8.9E-72 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_00388 f4fcf8e0127ac15f261864963d37bb64 253 Pfam PF00977 Histidine biosynthesis protein 5 234 3.6E-58 T 11-10-2018 IPR006062 Histidine biosynthesis GO:0000105 VSVS12_00028 70bca827b2beb9e3567d2852cc5bdc0f 113 SMART SM00418 5 83 1.3E-20 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VSVS12_00028 70bca827b2beb9e3567d2852cc5bdc0f 113 Gene3D G3DSA:1.10.10.10 3 89 5.9E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_00028 70bca827b2beb9e3567d2852cc5bdc0f 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 40 55 3.1E-14 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VSVS12_00028 70bca827b2beb9e3567d2852cc5bdc0f 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 55 70 3.1E-14 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VSVS12_00028 70bca827b2beb9e3567d2852cc5bdc0f 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 7 22 3.1E-14 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VSVS12_00028 70bca827b2beb9e3567d2852cc5bdc0f 113 SUPERFAMILY SSF46785 5 87 2.93E-21 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_00028 70bca827b2beb9e3567d2852cc5bdc0f 113 Pfam PF01022 Bacterial regulatory protein, arsR family 12 57 1.3E-10 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VSVS12_01789 aa65c48b917a8babc55c90bdfe26d06c 310 SUPERFAMILY SSF53067 4 298 8.48E-45 T 11-10-2018 VSVS12_01789 aa65c48b917a8babc55c90bdfe26d06c 310 Gene3D G3DSA:3.30.420.40 106 298 1.0E-41 T 11-10-2018 VSVS12_01789 aa65c48b917a8babc55c90bdfe26d06c 310 Pfam PF00480 ROK family 4 293 3.3E-39 T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VSVS12_01789 aa65c48b917a8babc55c90bdfe26d06c 310 Gene3D G3DSA:3.30.420.40 2 105 2.3E-15 T 11-10-2018 VSVS12_02302 c481fcddbab4bf51709a66d6df669f04 266 PRINTS PR01003 Flagellar assembly protein FliH signature 217 233 2.1E-6 T 11-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 VSVS12_02302 c481fcddbab4bf51709a66d6df669f04 266 PRINTS PR01003 Flagellar assembly protein FliH signature 85 107 2.1E-6 T 11-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 VSVS12_02302 c481fcddbab4bf51709a66d6df669f04 266 PRINTS PR01003 Flagellar assembly protein FliH signature 147 164 2.1E-6 T 11-10-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 VSVS12_02302 c481fcddbab4bf51709a66d6df669f04 266 Pfam PF02108 Flagellar assembly protein FliH 125 251 4.8E-34 T 11-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE VSVS12_00734 05f454b36af2a71006659a336795defb 901 Gene3D G3DSA:2.40.30.10 572 690 3.6E-40 T 11-10-2018 VSVS12_00734 05f454b36af2a71006659a336795defb 901 Gene3D G3DSA:3.40.50.300 398 571 1.2E-69 T 11-10-2018 VSVS12_00734 05f454b36af2a71006659a336795defb 901 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 898 17.55 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 VSVS12_00734 05f454b36af2a71006659a336795defb 901 SUPERFAMILY SSF52540 398 565 5.7E-52 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00734 05f454b36af2a71006659a336795defb 901 Pfam PF11987 Translation-initiation factor 2 685 790 7.5E-37 T 11-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 VSVS12_00734 05f454b36af2a71006659a336795defb 901 Pfam PF00009 Elongation factor Tu GTP binding domain 404 560 5.0E-32 T 11-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 VSVS12_00734 05f454b36af2a71006659a336795defb 901 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 6.4E-9 T 11-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal VSVS12_00734 05f454b36af2a71006659a336795defb 901 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 326 375 8.3E-14 T 11-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal VSVS12_00734 05f454b36af2a71006659a336795defb 901 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 404 558 7.9E-34 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VSVS12_00734 05f454b36af2a71006659a336795defb 901 SUPERFAMILY SSF46955 3 50 2.38E-12 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily VSVS12_00734 05f454b36af2a71006659a336795defb 901 SUPERFAMILY SSF50447 574 655 1.02E-22 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VSVS12_00734 05f454b36af2a71006659a336795defb 901 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 318 900 6.1E-284 T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 VSVS12_00734 05f454b36af2a71006659a336795defb 901 SUPERFAMILY SSF52156 678 807 1.03E-38 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily VSVS12_00734 05f454b36af2a71006659a336795defb 901 SUPERFAMILY SSF50447 802 898 1.26E-34 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VSVS12_00734 05f454b36af2a71006659a336795defb 901 Gene3D G3DSA:3.40.50.10050 695 801 6.2E-38 T 11-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily VSVS12_00734 05f454b36af2a71006659a336795defb 901 ProSitePatterns PS01176 Initiation factor 2 signature. 851 873 - T 11-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 VSVS12_00734 05f454b36af2a71006659a336795defb 901 Gene3D G3DSA:3.30.56.50 2 50 1.5E-22 T 11-10-2018 VSVS12_00734 05f454b36af2a71006659a336795defb 901 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 62 100 7.4E-16 T 11-10-2018 IPR013575 Initiation factor 2 associated domain, bacterial VSVS12_00734 05f454b36af2a71006659a336795defb 901 Gene3D G3DSA:2.40.30.10 802 899 3.0E-34 T 11-10-2018 VSVS12_01478 6dd893fc162af75cc8c3966a4cb539bb 401 PIRSF PIRSF000429 1 401 1.3E-129 T 11-10-2018 IPR002155 Thiolase GO:0016747 VSVS12_01478 6dd893fc162af75cc8c3966a4cb539bb 401 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 11-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 VSVS12_01478 6dd893fc162af75cc8c3966a4cb539bb 401 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 399 3.6E-143 T 11-10-2018 IPR002155 Thiolase GO:0016747 VSVS12_01478 6dd893fc162af75cc8c3966a4cb539bb 401 Gene3D G3DSA:3.40.47.10 6 276 3.4E-149 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 VSVS12_01478 6dd893fc162af75cc8c3966a4cb539bb 401 ProSitePatterns PS00737 Thiolases signature 2. 347 363 - T 11-10-2018 IPR020613 Thiolase, conserved site GO:0016747 VSVS12_01478 6dd893fc162af75cc8c3966a4cb539bb 401 Pfam PF00108 Thiolase, N-terminal domain 4 262 6.6E-98 T 11-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 VSVS12_01478 6dd893fc162af75cc8c3966a4cb539bb 401 SUPERFAMILY SSF53901 271 399 5.76E-39 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 VSVS12_01478 6dd893fc162af75cc8c3966a4cb539bb 401 ProSitePatterns PS00099 Thiolases active site. 382 395 - T 11-10-2018 IPR020610 Thiolase, active site GO:0016747 VSVS12_01478 6dd893fc162af75cc8c3966a4cb539bb 401 Gene3D G3DSA:3.40.47.10 126 398 3.4E-149 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 VSVS12_01478 6dd893fc162af75cc8c3966a4cb539bb 401 SUPERFAMILY SSF53901 4 270 2.02E-82 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 VSVS12_01478 6dd893fc162af75cc8c3966a4cb539bb 401 Pfam PF02803 Thiolase, C-terminal domain 270 400 3.3E-44 T 11-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 VSVS12_00146 2a8dc34dbc28e6af9a4f03382cdf5f37 395 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 393 1.5E-132 T 11-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like VSVS12_00146 2a8dc34dbc28e6af9a4f03382cdf5f37 395 Gene3D G3DSA:2.40.30.10 189 340 2.5E-133 T 11-10-2018 VSVS12_00146 2a8dc34dbc28e6af9a4f03382cdf5f37 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 2.8E-8 T 11-10-2018 VSVS12_00146 2a8dc34dbc28e6af9a4f03382cdf5f37 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 363 370 2.8E-8 T 11-10-2018 VSVS12_00146 2a8dc34dbc28e6af9a4f03382cdf5f37 395 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 156 165 2.8E-8 T 11-10-2018 VSVS12_00146 2a8dc34dbc28e6af9a4f03382cdf5f37 395 Gene3D G3DSA:1.10.8.260 263 323 2.5E-133 T 11-10-2018 IPR023166 HI0933-like insert domain superfamily VSVS12_00146 2a8dc34dbc28e6af9a4f03382cdf5f37 395 Pfam PF03486 HI0933-like protein 5 393 6.2E-158 T 11-10-2018 VSVS12_00146 2a8dc34dbc28e6af9a4f03382cdf5f37 395 Gene3D G3DSA:3.50.50.60 8 389 2.5E-133 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_00146 2a8dc34dbc28e6af9a4f03382cdf5f37 395 SUPERFAMILY SSF51905 1 395 1.12E-59 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_00146 2a8dc34dbc28e6af9a4f03382cdf5f37 395 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.7E-5 T 11-10-2018 VSVS12_00146 2a8dc34dbc28e6af9a4f03382cdf5f37 395 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 348 370 2.7E-5 T 11-10-2018 VSVS12_00146 2a8dc34dbc28e6af9a4f03382cdf5f37 395 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 153 171 2.7E-5 T 11-10-2018 VSVS12_00146 2a8dc34dbc28e6af9a4f03382cdf5f37 395 SUPERFAMILY SSF160996 191 339 4.32E-43 T 11-10-2018 VSVS12_03253 28f2d6d6136c5e40cc925822d615abb6 684 SUPERFAMILY SSF46955 2 68 5.77E-10 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily VSVS12_03253 28f2d6d6136c5e40cc925822d615abb6 684 Gene3D G3DSA:1.10.10.60 72 162 2.2E-13 T 11-10-2018 VSVS12_03253 28f2d6d6136c5e40cc925822d615abb6 684 Gene3D G3DSA:1.10.10.10 1 71 8.6E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_03253 28f2d6d6136c5e40cc925822d615abb6 684 SUPERFAMILY SSF53098 257 488 1.21E-43 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_03253 28f2d6d6136c5e40cc925822d615abb6 684 SUPERFAMILY SSF46689 72 167 1.68E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_03253 28f2d6d6136c5e40cc925822d615abb6 684 Gene3D G3DSA:3.30.420.10 246 496 1.1E-61 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VSVS12_03253 28f2d6d6136c5e40cc925822d615abb6 684 Gene3D G3DSA:1.10.10.60 175 239 7.0E-9 T 11-10-2018 VSVS12_03253 28f2d6d6136c5e40cc925822d615abb6 684 Pfam PF02914 Bacteriophage Mu transposase 258 482 9.5E-32 T 11-10-2018 IPR004189 Bacteriophage Mu, transposase GO:0003677|GO:0004803|GO:0006313|GO:0015074 VSVS12_03253 28f2d6d6136c5e40cc925822d615abb6 684 Pfam PF09039 Mu DNA binding, I gamma subdomain 149 250 2.7E-14 T 11-10-2018 IPR015126 Mu DNA binding, I gamma subdomain VSVS12_03253 28f2d6d6136c5e40cc925822d615abb6 684 Pfam PF02316 Mu DNA-binding domain 7 105 6.1E-7 T 11-10-2018 IPR003314 Mu-type HTH domain GO:0003677 VSVS12_03253 28f2d6d6136c5e40cc925822d615abb6 684 Gene3D G3DSA:2.30.30.130 501 571 5.3E-9 T 11-10-2018 IPR009004 Transposase, Mu, C-terminal VSVS12_03253 28f2d6d6136c5e40cc925822d615abb6 684 ProDom PD223702 DNA TRANSPOSASE DNA-BINDING TRANSPOSABLE INTEGRATION ELEMENT RECOMBINATION TRANSPOSASE EXCISION TRANSPOSITION 264 488 3.0E-26 T 11-10-2018 VSVS12_03253 28f2d6d6136c5e40cc925822d615abb6 684 Pfam PF09299 Mu transposase, C-terminal 495 568 1.2E-10 T 11-10-2018 IPR015378 Transposase-like, Mu, C-terminal VSVS12_03253 28f2d6d6136c5e40cc925822d615abb6 684 SUPERFAMILY SSF50610 492 569 1.83E-9 T 11-10-2018 IPR009004 Transposase, Mu, C-terminal VSVS12_00448 2876f288792523fba13ebb7ffff1103f 192 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 192 1.0E-87 T 11-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VSVS12_00448 2876f288792523fba13ebb7ffff1103f 192 Gene3D G3DSA:3.40.50.880 1 191 3.8E-61 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like VSVS12_00448 2876f288792523fba13ebb7ffff1103f 192 PRINTS PR00097 Anthranilate synthase component II signature 99 107 3.4E-36 T 11-10-2018 VSVS12_00448 2876f288792523fba13ebb7ffff1103f 192 PRINTS PR00097 Anthranilate synthase component II signature 119 131 3.4E-36 T 11-10-2018 VSVS12_00448 2876f288792523fba13ebb7ffff1103f 192 PRINTS PR00097 Anthranilate synthase component II signature 2 16 3.4E-36 T 11-10-2018 VSVS12_00448 2876f288792523fba13ebb7ffff1103f 192 PRINTS PR00097 Anthranilate synthase component II signature 74 85 3.4E-36 T 11-10-2018 VSVS12_00448 2876f288792523fba13ebb7ffff1103f 192 PRINTS PR00097 Anthranilate synthase component II signature 47 56 3.4E-36 T 11-10-2018 VSVS12_00448 2876f288792523fba13ebb7ffff1103f 192 PRINTS PR00097 Anthranilate synthase component II signature 169 182 3.4E-36 T 11-10-2018 VSVS12_00448 2876f288792523fba13ebb7ffff1103f 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 4.2E-13 T 11-10-2018 VSVS12_00448 2876f288792523fba13ebb7ffff1103f 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 4.2E-13 T 11-10-2018 VSVS12_00448 2876f288792523fba13ebb7ffff1103f 192 PRINTS PR00096 Glutamine amidotransferase superfamily signature 169 182 4.2E-13 T 11-10-2018 VSVS12_00448 2876f288792523fba13ebb7ffff1103f 192 Pfam PF00117 Glutamine amidotransferase class-I 4 190 1.1E-54 T 11-10-2018 IPR017926 Glutamine amidotransferase VSVS12_00448 2876f288792523fba13ebb7ffff1103f 192 SUPERFAMILY SSF52317 1 191 1.94E-53 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like VSVS12_00448 2876f288792523fba13ebb7ffff1103f 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 2.3E-6 T 11-10-2018 VSVS12_00448 2876f288792523fba13ebb7ffff1103f 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 2.3E-6 T 11-10-2018 VSVS12_00448 2876f288792523fba13ebb7ffff1103f 192 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 91 108 2.3E-6 T 11-10-2018 VSVS12_00898 06d875764528a52800aebd21f5072348 231 SUPERFAMILY SSF118196 2 225 3.66E-76 T 11-10-2018 IPR036413 YaeB-like superfamily VSVS12_00898 06d875764528a52800aebd21f5072348 231 Pfam PF01980 Uncharacterised protein family UPF0066 19 141 1.7E-37 T 11-10-2018 IPR023370 YaeB-like, N-terminal domain VSVS12_00898 06d875764528a52800aebd21f5072348 231 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 2 145 1.3E-44 T 11-10-2018 IPR023370 YaeB-like, N-terminal domain VSVS12_00898 06d875764528a52800aebd21f5072348 231 Gene3D G3DSA:2.40.30.70 22 144 4.7E-42 T 11-10-2018 IPR036414 YaeB, N-terminal domain superfamily VSVS12_00898 06d875764528a52800aebd21f5072348 231 Gene3D G3DSA:3.30.2310.10 145 227 2.5E-19 T 11-10-2018 VSVS12_00003 0f767fee39f0419244dde6ee6ce4a77b 272 Pfam PF04072 Leucine carboxyl methyltransferase 72 131 5.3E-6 T 11-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 VSVS12_00003 0f767fee39f0419244dde6ee6ce4a77b 272 Gene3D G3DSA:3.40.50.150 14 262 1.4E-18 T 11-10-2018 VSVS12_00003 0f767fee39f0419244dde6ee6ce4a77b 272 PIRSF PIRSF028177 6 272 2.3E-72 T 11-10-2018 IPR016874 Tetracenomycin polyketide synthesis O-methyltransferase TcmP GO:0017000|GO:1901106 VSVS12_00003 0f767fee39f0419244dde6ee6ce4a77b 272 SUPERFAMILY SSF53335 20 253 5.65E-34 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_00328 6f73a2af2371df60be0337420ca804d2 559 Gene3D G3DSA:1.10.287.950 229 559 2.0E-71 T 11-10-2018 VSVS12_00328 6f73a2af2371df60be0337420ca804d2 559 Pfam PF00672 HAMP domain 229 278 2.4E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_00328 6f73a2af2371df60be0337420ca804d2 559 SMART SM00283 297 558 1.5E-57 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_00328 6f73a2af2371df60be0337420ca804d2 559 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 19 44 4.1E-20 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VSVS12_00328 6f73a2af2371df60be0337420ca804d2 559 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 395 422 4.1E-20 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VSVS12_00328 6f73a2af2371df60be0337420ca804d2 559 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 424 453 4.1E-20 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VSVS12_00328 6f73a2af2371df60be0337420ca804d2 559 Gene3D G3DSA:3.30.450.20 40 185 3.0E-52 T 11-10-2018 VSVS12_00328 6f73a2af2371df60be0337420ca804d2 559 SMART SM00304 317 370 60.0 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_00328 6f73a2af2371df60be0337420ca804d2 559 SMART SM00304 228 282 2.9E-10 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_00328 6f73a2af2371df60be0337420ca804d2 559 Pfam PF17200 Single Cache domain 2 49 193 3.8E-37 T 11-10-2018 IPR033480 Single Cache domain 2 VSVS12_00328 6f73a2af2371df60be0337420ca804d2 559 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 359 525 8.5E-39 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_00328 6f73a2af2371df60be0337420ca804d2 559 SMART SM01049 46 135 5.7E-30 T 11-10-2018 IPR033480 Single Cache domain 2 VSVS12_00328 6f73a2af2371df60be0337420ca804d2 559 SUPERFAMILY SSF58104 250 559 1.83E-73 T 11-10-2018 VSVS12_01636 4ff5411a5b16673ff7bb0bfb1c1f34dd 231 Gene3D G3DSA:3.40.50.620 1 230 8.9E-79 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VSVS12_01636 4ff5411a5b16673ff7bb0bfb1c1f34dd 231 SUPERFAMILY SSF52402 1 212 3.53E-66 T 11-10-2018 VSVS12_01636 4ff5411a5b16673ff7bb0bfb1c1f34dd 231 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 218 49.769 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 VSVS12_01636 4ff5411a5b16673ff7bb0bfb1c1f34dd 231 PIRSF PIRSF006293 1 225 1.5E-82 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 VSVS12_01636 4ff5411a5b16673ff7bb0bfb1c1f34dd 231 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 205 3.3E-81 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 VSVS12_01636 4ff5411a5b16673ff7bb0bfb1c1f34dd 231 Pfam PF06508 Queuosine biosynthesis protein QueC 3 212 2.0E-84 T 11-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 VSVS12_00773 0057aa4111b2f984a8e2704ff56b4838 375 Gene3D G3DSA:3.40.50.720 81 247 1.0E-42 T 11-10-2018 VSVS12_00773 0057aa4111b2f984a8e2704ff56b4838 375 Gene3D G3DSA:1.10.3660.10 248 373 5.3E-50 T 11-10-2018 VSVS12_00773 0057aa4111b2f984a8e2704ff56b4838 375 PIRSF PIRSF001499 1 374 3.8E-179 T 11-10-2018 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 VSVS12_00773 0057aa4111b2f984a8e2704ff56b4838 375 SUPERFAMILY SSF48600 4 88 1.03E-23 T 11-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VSVS12_00773 0057aa4111b2f984a8e2704ff56b4838 375 Pfam PF02153 Prephenate dehydrogenase 139 343 1.9E-30 T 11-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 VSVS12_00773 0057aa4111b2f984a8e2704ff56b4838 375 SUPERFAMILY SSF48179 242 366 4.87E-40 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VSVS12_00773 0057aa4111b2f984a8e2704ff56b4838 375 Gene3D G3DSA:1.20.59.10 1 80 3.8E-17 T 11-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VSVS12_00773 0057aa4111b2f984a8e2704ff56b4838 375 Pfam PF01817 Chorismate mutase type II 9 87 4.6E-21 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VSVS12_00773 0057aa4111b2f984a8e2704ff56b4838 375 SMART SM00830 9 89 7.3E-28 T 11-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 VSVS12_00773 0057aa4111b2f984a8e2704ff56b4838 375 SUPERFAMILY SSF51735 91 237 3.58E-38 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_00773 0057aa4111b2f984a8e2704ff56b4838 375 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 4.5E-41 T 11-10-2018 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 VSVS12_03346 b840f423f0da4915ae9924fd038e2d4c 173 Pfam PF11066 Protein of unknown function (DUF2867) 24 159 5.7E-22 T 11-10-2018 IPR021295 Protein of unknown function DUF2867 VSVS12_03073 308a3f50b22c6fc50f22baad79e32084 461 Gene3D G3DSA:1.10.340.30 319 418 8.6E-17 T 11-10-2018 VSVS12_03073 308a3f50b22c6fc50f22baad79e32084 461 Gene3D G3DSA:3.30.310.20 204 318 3.2E-26 T 11-10-2018 IPR037046 DNA-3-methyladenine glycosylase AlkA, N-terminal domain superfamily VSVS12_03073 308a3f50b22c6fc50f22baad79e32084 461 Pfam PF02805 Metal binding domain of Ada 19 81 1.0E-30 T 11-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 VSVS12_03073 308a3f50b22c6fc50f22baad79e32084 461 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 324 443 3.5E-5 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 VSVS12_03073 308a3f50b22c6fc50f22baad79e32084 461 SUPERFAMILY SSF48150 309 457 4.19E-27 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 VSVS12_03073 308a3f50b22c6fc50f22baad79e32084 461 SUPERFAMILY SSF57884 15 94 1.31E-33 T 11-10-2018 IPR035451 Ada-like domain superfamily VSVS12_03073 308a3f50b22c6fc50f22baad79e32084 461 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 147 189 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VSVS12_03073 308a3f50b22c6fc50f22baad79e32084 461 SUPERFAMILY SSF46689 148 196 5.82E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_03073 308a3f50b22c6fc50f22baad79e32084 461 Pfam PF12833 Helix-turn-helix domain 116 194 1.7E-21 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VSVS12_03073 308a3f50b22c6fc50f22baad79e32084 461 SMART SM01009 204 318 3.8E-35 T 11-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal VSVS12_03073 308a3f50b22c6fc50f22baad79e32084 461 SUPERFAMILY SSF46689 96 143 5.38E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_03073 308a3f50b22c6fc50f22baad79e32084 461 SUPERFAMILY SSF55945 205 300 1.1E-24 T 11-10-2018 VSVS12_03073 308a3f50b22c6fc50f22baad79e32084 461 Gene3D G3DSA:1.10.10.60 90 197 1.2E-24 T 11-10-2018 VSVS12_03073 308a3f50b22c6fc50f22baad79e32084 461 Pfam PF06029 AlkA N-terminal domain 204 318 5.2E-35 T 11-10-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal VSVS12_03073 308a3f50b22c6fc50f22baad79e32084 461 Gene3D G3DSA:3.40.10.10 10 83 5.1E-30 T 11-10-2018 IPR035451 Ada-like domain superfamily VSVS12_03073 308a3f50b22c6fc50f22baad79e32084 461 SMART SM00342 110 193 1.1E-25 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VSVS12_00549 fd809d8bcb519440aa8a7a75d225b6e6 212 PIRSF PIRSF004649 1 212 2.5E-57 T 11-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC VSVS12_00549 fd809d8bcb519440aa8a7a75d225b6e6 212 Pfam PF05494 MlaC protein 34 199 3.8E-46 T 11-10-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC VSVS12_00549 fd809d8bcb519440aa8a7a75d225b6e6 212 Gene3D G3DSA:3.10.450.710 25 204 6.3E-38 T 11-10-2018 VSVS12_00412 f21a087948a58ae40ee05cbdeb65443e 125 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 7 125 24.279 T 11-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 VSVS12_00412 f21a087948a58ae40ee05cbdeb65443e 125 Gene3D G3DSA:1.20.1300.10 6 125 1.4E-43 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VSVS12_00412 f21a087948a58ae40ee05cbdeb65443e 125 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 11 125 4.0E-56 T 11-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 VSVS12_00412 f21a087948a58ae40ee05cbdeb65443e 125 SUPERFAMILY SSF81343 7 125 5.45E-49 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VSVS12_00412 f21a087948a58ae40ee05cbdeb65443e 125 PIRSF PIRSF000179 6 125 5.4E-55 T 11-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 VSVS12_00412 f21a087948a58ae40ee05cbdeb65443e 125 Pfam PF02313 Fumarate reductase subunit D 11 123 4.3E-44 T 11-10-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 VSVS12_03988 4566a4bb9a1b524919fa0036f6fbf1ec 331 SUPERFAMILY SSF52283 1 136 5.53E-39 T 11-10-2018 VSVS12_03988 4566a4bb9a1b524919fa0036f6fbf1ec 331 Gene3D G3DSA:3.40.50.720 4 318 3.1E-131 T 11-10-2018 VSVS12_03988 4566a4bb9a1b524919fa0036f6fbf1ec 331 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VSVS12_03988 4566a4bb9a1b524919fa0036f6fbf1ec 331 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 195 217 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VSVS12_03988 4566a4bb9a1b524919fa0036f6fbf1ec 331 Gene3D G3DSA:3.40.50.720 103 298 3.1E-131 T 11-10-2018 VSVS12_03988 4566a4bb9a1b524919fa0036f6fbf1ec 331 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 148 175 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 VSVS12_03988 4566a4bb9a1b524919fa0036f6fbf1ec 331 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 298 4.9E-49 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VSVS12_03988 4566a4bb9a1b524919fa0036f6fbf1ec 331 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 328 4.1E-32 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 VSVS12_03988 4566a4bb9a1b524919fa0036f6fbf1ec 331 SUPERFAMILY SSF51735 103 299 1.28E-51 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_03163 3feb929455528373fbb3fb6178657a1d 385 Gene3D G3DSA:1.20.1090.10 194 383 2.8E-49 T 11-10-2018 VSVS12_03163 3feb929455528373fbb3fb6178657a1d 385 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 360 6.6E-106 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VSVS12_03163 3feb929455528373fbb3fb6178657a1d 385 Gene3D G3DSA:3.40.50.1970 1 193 8.5E-53 T 11-10-2018 VSVS12_03163 3feb929455528373fbb3fb6178657a1d 385 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 182 210 - T 11-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 VSVS12_03163 3feb929455528373fbb3fb6178657a1d 385 SUPERFAMILY SSF56796 2 381 2.75E-101 T 11-10-2018 VSVS12_03187 337fb6982f27711764baef64a22f0278 310 Gene3D G3DSA:3.40.50.300 3 303 1.4E-79 T 11-10-2018 VSVS12_03187 337fb6982f27711764baef64a22f0278 310 SMART SM00382 39 233 2.6E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_03187 337fb6982f27711764baef64a22f0278 310 SUPERFAMILY SSF52540 5 254 1.77E-66 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03187 337fb6982f27711764baef64a22f0278 310 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 265 2.5E-8 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VSVS12_03187 337fb6982f27711764baef64a22f0278 310 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_03187 337fb6982f27711764baef64a22f0278 310 Pfam PF00005 ABC transporter 30 184 1.8E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_03672 3f690bbefedbd228c354a2505880dbc4 361 Pfam PF01758 Sodium Bile acid symporter family 58 254 4.9E-61 T 11-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 VSVS12_03672 3f690bbefedbd228c354a2505880dbc4 361 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 13 342 6.4E-137 T 11-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 VSVS12_03672 3f690bbefedbd228c354a2505880dbc4 361 Gene3D G3DSA:1.20.1530.20 11 342 1.8E-22 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily VSVS12_03672 3f690bbefedbd228c354a2505880dbc4 361 PIRSF PIRSF005508 2 359 6.0E-136 T 11-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 VSVS12_00621 aab1f22203b28f43e0d4f52c236f0540 593 Pfam PF03235 Protein of unknown function DUF262 8 257 3.3E-29 T 11-10-2018 IPR004919 Domain of unknown function DUF262 VSVS12_01137 7c6536fcc8af172949cf3f5702d430dc 531 Gene3D G3DSA:1.10.579.10 344 464 5.0E-54 T 11-10-2018 VSVS12_01137 7c6536fcc8af172949cf3f5702d430dc 531 Gene3D G3DSA:1.25.40.80 149 340 1.8E-93 T 11-10-2018 VSVS12_01137 7c6536fcc8af172949cf3f5702d430dc 531 Gene3D G3DSA:1.10.10.1710 465 531 7.1E-25 T 11-10-2018 VSVS12_01137 7c6536fcc8af172949cf3f5702d430dc 531 SUPERFAMILY SSF48173 246 508 4.06E-61 T 11-10-2018 IPR036134 Cryptochrome/DNA photolyase, FAD-binding domain-like superfamily Reactome: R-HSA-400253 VSVS12_01137 7c6536fcc8af172949cf3f5702d430dc 531 Pfam PF04244 Deoxyribodipyrimidine photo-lyase-related protein 7 240 1.4E-56 T 11-10-2018 IPR007357 Deoxyribodipyrimidine photolyase-related protein VSVS12_01137 7c6536fcc8af172949cf3f5702d430dc 531 Gene3D G3DSA:3.40.50.620 8 247 1.8E-93 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VSVS12_00676 0e08a22584c868c07979134a8344b8f9 307 Pfam PF00005 ABC transporter 20 164 7.9E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_00676 0e08a22584c868c07979134a8344b8f9 307 SUPERFAMILY SSF52540 3 233 5.33E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00676 0e08a22584c868c07979134a8344b8f9 307 Gene3D G3DSA:3.40.50.300 1 241 4.9E-66 T 11-10-2018 VSVS12_00676 0e08a22584c868c07979134a8344b8f9 307 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_00676 0e08a22584c868c07979134a8344b8f9 307 SMART SM00382 29 213 7.3E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_03513 b6eab868fd18cff1fe4b1d40b654ed84 334 SUPERFAMILY SSF53850 29 325 5.97E-60 T 11-10-2018 VSVS12_03513 b6eab868fd18cff1fe4b1d40b654ed84 334 Gene3D G3DSA:3.40.190.10 118 261 7.6E-85 T 11-10-2018 VSVS12_03513 b6eab868fd18cff1fe4b1d40b654ed84 334 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 4 324 5.8E-99 T 11-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family VSVS12_03513 b6eab868fd18cff1fe4b1d40b654ed84 334 Gene3D G3DSA:3.40.190.10 32 324 7.6E-85 T 11-10-2018 VSVS12_03513 b6eab868fd18cff1fe4b1d40b654ed84 334 Pfam PF16868 NMT1-like family 32 324 2.1E-106 T 11-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family VSVS12_04337 ebc30ef2e12d7142a69fc890a7bab7e2 444 SMART SM00490 260 341 1.7E-30 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_04337 ebc30ef2e12d7142a69fc890a7bab7e2 444 Gene3D G3DSA:3.40.50.300 1 212 9.3E-72 T 11-10-2018 VSVS12_04337 ebc30ef2e12d7142a69fc890a7bab7e2 444 Pfam PF00271 Helicase conserved C-terminal domain 235 341 1.9E-28 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_04337 ebc30ef2e12d7142a69fc890a7bab7e2 444 SMART SM00487 20 223 9.2E-51 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VSVS12_04337 ebc30ef2e12d7142a69fc890a7bab7e2 444 Pfam PF00270 DEAD/DEAH box helicase 25 194 5.9E-46 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VSVS12_04337 ebc30ef2e12d7142a69fc890a7bab7e2 444 Gene3D G3DSA:3.40.50.300 214 429 1.9E-49 T 11-10-2018 VSVS12_04337 ebc30ef2e12d7142a69fc890a7bab7e2 444 SUPERFAMILY SSF52540 73 359 8.37E-68 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_04337 ebc30ef2e12d7142a69fc890a7bab7e2 444 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VSVS12_04425 98b55b7099adbbca9ce1b3e3fab309cd 170 SUPERFAMILY SSF53955 23 159 2.81E-10 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily VSVS12_01305 d8aeb072b82f370f33cb13da2ed90e62 351 SUPERFAMILY SSF52058 73 236 3.15E-7 T 11-10-2018 VSVS12_01305 d8aeb072b82f370f33cb13da2ed90e62 351 Pfam PF13306 Leucine rich repeats (6 copies) 64 184 8.4E-29 T 11-10-2018 IPR026906 Leucine rich repeat 5 VSVS12_01305 d8aeb072b82f370f33cb13da2ed90e62 351 Pfam PF13306 Leucine rich repeats (6 copies) 218 336 3.7E-26 T 11-10-2018 IPR026906 Leucine rich repeat 5 VSVS12_01305 d8aeb072b82f370f33cb13da2ed90e62 351 Gene3D G3DSA:3.80.10.10 23 202 3.2E-42 T 11-10-2018 IPR032675 Leucine-rich repeat domain superfamily VSVS12_01305 d8aeb072b82f370f33cb13da2ed90e62 351 Gene3D G3DSA:3.80.10.10 203 345 5.6E-33 T 11-10-2018 IPR032675 Leucine-rich repeat domain superfamily VSVS12_01579 9f8f5e802a2d616ca4c7a022527eb7a4 247 SMART SM00382 32 223 7.0E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_01579 9f8f5e802a2d616ca4c7a022527eb7a4 247 SUPERFAMILY SSF52540 8 239 2.85E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01579 9f8f5e802a2d616ca4c7a022527eb7a4 247 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_01579 9f8f5e802a2d616ca4c7a022527eb7a4 247 Gene3D G3DSA:3.40.50.300 4 247 1.0E-74 T 11-10-2018 VSVS12_01579 9f8f5e802a2d616ca4c7a022527eb7a4 247 Pfam PF00005 ABC transporter 23 175 2.8E-37 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_01579 9f8f5e802a2d616ca4c7a022527eb7a4 247 PIRSF PIRSF039085 5 247 9.6E-93 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VSVS12_03082 9d7fd6314e21df7461c5ffeef7957574 203 SUPERFAMILY SSF46689 3 71 6.8E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_03082 9d7fd6314e21df7461c5ffeef7957574 203 Gene3D G3DSA:1.10.10.60 1 47 3.6E-20 T 11-10-2018 VSVS12_03082 9d7fd6314e21df7461c5ffeef7957574 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 56 9.4E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VSVS12_03082 9d7fd6314e21df7461c5ffeef7957574 203 Gene3D G3DSA:1.10.357.10 49 193 2.6E-24 T 11-10-2018 VSVS12_03082 9d7fd6314e21df7461c5ffeef7957574 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 2.8E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VSVS12_03082 9d7fd6314e21df7461c5ffeef7957574 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 2.8E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VSVS12_03082 9d7fd6314e21df7461c5ffeef7957574 203 SUPERFAMILY SSF48498 80 193 1.01E-19 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VSVS12_00387 28819f3fab76f7673c380294d1384b19 205 SUPERFAMILY SSF52317 1 201 9.17E-46 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like VSVS12_00387 28819f3fab76f7673c380294d1384b19 205 Gene3D G3DSA:3.40.50.880 1 204 1.4E-62 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like VSVS12_00387 28819f3fab76f7673c380294d1384b19 205 Pfam PF00117 Glutamine amidotransferase class-I 37 199 2.1E-17 T 11-10-2018 IPR017926 Glutamine amidotransferase VSVS12_00387 28819f3fab76f7673c380294d1384b19 205 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 1 202 31.92 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 VSVS12_00387 28819f3fab76f7673c380294d1384b19 205 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 2 201 1.7E-63 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 VSVS12_00387 28819f3fab76f7673c380294d1384b19 205 PIRSF PIRSF000495 1 204 3.1E-64 T 11-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 VSVS12_02801 ee050576c2d5eec7c156e8b060c20bd9 154 Gene3D G3DSA:3.40.50.2300 5 137 3.6E-21 T 11-10-2018 VSVS12_02801 ee050576c2d5eec7c156e8b060c20bd9 154 SUPERFAMILY SSF52172 5 132 1.57E-22 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_02801 ee050576c2d5eec7c156e8b060c20bd9 154 SMART SM00448 9 126 2.4E-19 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_02801 ee050576c2d5eec7c156e8b060c20bd9 154 Pfam PF00072 Response regulator receiver domain 11 125 2.2E-16 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_01268 2a964011ef10c783e7ab7cb1bbcfd958 146 Pfam PF03610 PTS system fructose IIA component 4 115 2.1E-29 T 11-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 VSVS12_01268 2a964011ef10c783e7ab7cb1bbcfd958 146 SUPERFAMILY SSF53062 1 126 2.09E-33 T 11-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 VSVS12_01268 2a964011ef10c783e7ab7cb1bbcfd958 146 Gene3D G3DSA:3.40.50.510 1 144 4.9E-34 T 11-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 VSVS12_02190 de731244a7d4242cb0a2967e1c9c178c 102 ProSitePatterns PS01358 Zinc finger RanBP2-type signature. 77 96 - T 11-10-2018 IPR001876 Zinc finger, RanBP2-type VSVS12_02190 de731244a7d4242cb0a2967e1c9c178c 102 Pfam PF09413 Putative prokaryotic signal transducing protein 2 69 1.1E-7 T 11-10-2018 IPR018551 Domain of unknown function DUF2007 VSVS12_00592 6d6a006fdb1e291edd35046dc655dda6 414 Gene3D G3DSA:1.25.40.10 315 413 3.9E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_00592 6d6a006fdb1e291edd35046dc655dda6 414 Pfam PF14559 Tetratricopeptide repeat 233 300 1.6E-5 T 11-10-2018 VSVS12_00592 6d6a006fdb1e291edd35046dc655dda6 414 SUPERFAMILY SSF48452 229 382 1.9E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_00592 6d6a006fdb1e291edd35046dc655dda6 414 Gene3D G3DSA:1.25.40.10 185 314 7.7E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_00592 6d6a006fdb1e291edd35046dc655dda6 414 SMART SM00028 223 256 210.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_00592 6d6a006fdb1e291edd35046dc655dda6 414 SMART SM00028 323 356 6.8 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_00592 6d6a006fdb1e291edd35046dc655dda6 414 SMART SM00028 257 290 0.78 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_03141 74f320d77b7d82120e0d24c0364f8e62 295 SUPERFAMILY SSF46689 23 98 1.25E-21 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_03141 74f320d77b7d82120e0d24c0364f8e62 295 Pfam PF01418 Helix-turn-helix domain, rpiR family 24 98 4.6E-20 T 11-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 VSVS12_03141 74f320d77b7d82120e0d24c0364f8e62 295 SUPERFAMILY SSF53697 120 286 3.18E-30 T 11-10-2018 VSVS12_03141 74f320d77b7d82120e0d24c0364f8e62 295 Pfam PF01380 SIS domain 147 269 9.6E-16 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VSVS12_03141 74f320d77b7d82120e0d24c0364f8e62 295 Gene3D G3DSA:3.40.50.10490 109 295 2.2E-45 T 11-10-2018 VSVS12_03141 74f320d77b7d82120e0d24c0364f8e62 295 Gene3D G3DSA:1.10.10.10 19 99 3.7E-31 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_03538 44b195b8e9fb0478c513820f0cb1d9d4 98 Gene3D G3DSA:3.30.70.860 1 98 5.7E-39 T 11-10-2018 IPR035571 UPF0234-like, C-terminal VSVS12_03538 44b195b8e9fb0478c513820f0cb1d9d4 98 Pfam PF04175 Protein of unknown function (DUF406) 7 94 9.0E-28 T 11-10-2018 IPR005272 Conserved hypothetical protein CHP00743 VSVS12_03543 408f7ad93450ede2c5aeaafdb96fc117 347 PIRSF PIRSF000235 1 347 4.7E-194 T 11-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 VSVS12_03543 408f7ad93450ede2c5aeaafdb96fc117 347 Hamap MF_00596 GMP reductase [guaC]. 1 345 49.825 T 11-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 VSVS12_03543 408f7ad93450ede2c5aeaafdb96fc117 347 SMART SM01240 7 344 2.8E-137 T 11-10-2018 VSVS12_03543 408f7ad93450ede2c5aeaafdb96fc117 347 TIGRFAM TIGR01305 GMP_reduct_1: guanosine monophosphate reductase 2 344 8.3E-183 T 11-10-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 VSVS12_03543 408f7ad93450ede2c5aeaafdb96fc117 347 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 176 188 - T 11-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 VSVS12_03543 408f7ad93450ede2c5aeaafdb96fc117 347 Gene3D G3DSA:3.20.20.70 1 345 8.9E-116 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_03543 408f7ad93450ede2c5aeaafdb96fc117 347 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 338 1.1E-79 T 11-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 VSVS12_03543 408f7ad93450ede2c5aeaafdb96fc117 347 SUPERFAMILY SSF51412 6 336 1.3E-97 T 11-10-2018 VSVS12_00635 55b377ec8147ffdd4a7aa8471d5eae81 391 Pfam PF01018 GTP1/OBG 4 156 4.5E-55 T 11-10-2018 IPR006169 GTP1/OBG domain VSVS12_00635 55b377ec8147ffdd4a7aa8471d5eae81 391 Hamap MF_01454 GTPase Obg [obg]. 2 333 46.817 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 VSVS12_00635 55b377ec8147ffdd4a7aa8471d5eae81 391 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 332 2.2E-142 T 11-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 VSVS12_00635 55b377ec8147ffdd4a7aa8471d5eae81 391 Gene3D G3DSA:3.40.50.300 159 335 2.8E-51 T 11-10-2018 VSVS12_00635 55b377ec8147ffdd4a7aa8471d5eae81 391 PIRSF PIRSF002401 1 373 2.6E-135 T 11-10-2018 IPR035101 GTP-binding protein, Obg-type VSVS12_00635 55b377ec8147ffdd4a7aa8471d5eae81 391 Gene3D G3DSA:2.70.210.12 1 158 1.6E-57 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily VSVS12_00635 55b377ec8147ffdd4a7aa8471d5eae81 391 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 11-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 VSVS12_00635 55b377ec8147ffdd4a7aa8471d5eae81 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 7.2E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 VSVS12_00635 55b377ec8147ffdd4a7aa8471d5eae81 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 7.2E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 VSVS12_00635 55b377ec8147ffdd4a7aa8471d5eae81 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 7.2E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 VSVS12_00635 55b377ec8147ffdd4a7aa8471d5eae81 391 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 7.2E-34 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 VSVS12_00635 55b377ec8147ffdd4a7aa8471d5eae81 391 SUPERFAMILY SSF82051 2 157 8.5E-55 T 11-10-2018 IPR036726 GTP1/OBG domain superfamily VSVS12_00635 55b377ec8147ffdd4a7aa8471d5eae81 391 SUPERFAMILY SSF52540 151 342 1.43E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00635 55b377ec8147ffdd4a7aa8471d5eae81 391 Pfam PF01926 50S ribosome-binding GTPase 161 284 2.3E-23 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 VSVS12_01568 1016845fd6fb2ffc9bd989144fa99767 216 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 81 6.5E-16 T 11-10-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 VSVS12_01568 1016845fd6fb2ffc9bd989144fa99767 216 Gene3D G3DSA:1.20.1050.10 86 213 7.9E-45 T 11-10-2018 VSVS12_01568 1016845fd6fb2ffc9bd989144fa99767 216 SUPERFAMILY SSF47616 83 211 1.11E-27 T 11-10-2018 IPR036282 Glutathione S-transferase, C-terminal domain superfamily VSVS12_01568 1016845fd6fb2ffc9bd989144fa99767 216 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 2 211 1.2E-82 T 11-10-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-204174|Reactome: R-HSA-71182 VSVS12_01568 1016845fd6fb2ffc9bd989144fa99767 216 Gene3D G3DSA:3.40.30.10 1 85 1.2E-26 T 11-10-2018 VSVS12_01568 1016845fd6fb2ffc9bd989144fa99767 216 SUPERFAMILY SSF52833 1 80 3.87E-22 T 11-10-2018 IPR036249 Thioredoxin-like superfamily VSVS12_01568 1016845fd6fb2ffc9bd989144fa99767 216 Pfam PF14497 Glutathione S-transferase, C-terminal domain 120 198 7.2E-6 T 11-10-2018 IPR004046 Glutathione S-transferase, C-terminal VSVS12_01203 0a057fe614df12b35f6c8ba266d82a74 397 Pfam PF13679 Methyltransferase domain 109 228 2.0E-15 T 11-10-2018 IPR025714 Methyltransferase domain VSVS12_01203 0a057fe614df12b35f6c8ba266d82a74 397 Gene3D G3DSA:3.40.50.150 107 243 3.5E-5 T 11-10-2018 VSVS12_01203 0a057fe614df12b35f6c8ba266d82a74 397 SUPERFAMILY SSF53335 125 219 4.02E-7 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_00842 8fb94964b01f3e5187990c4f23e9ab27 354 SUPERFAMILY SSF53187 26 318 2.41E-75 T 11-10-2018 VSVS12_00842 8fb94964b01f3e5187990c4f23e9ab27 354 Gene3D G3DSA:3.40.630.10 18 320 2.8E-93 T 11-10-2018 VSVS12_00842 8fb94964b01f3e5187990c4f23e9ab27 354 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 50 317 3.7E-68 T 11-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 VSVS12_00842 8fb94964b01f3e5187990c4f23e9ab27 354 PIRSF PIRSF039012 4 325 1.0E-92 T 11-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 VSVS12_00044 d95af30f107f8a2971bc7a40d1cb2faf 415 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 76 404 9.7E-104 T 11-10-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX VSVS12_00702 d6153c803dd004d20786bfc781e94797 637 PRINTS PR00738 Glycosyl hydrolase family 20 signature 587 604 1.8E-49 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VSVS12_00702 d6153c803dd004d20786bfc781e94797 637 PRINTS PR00738 Glycosyl hydrolase family 20 signature 252 269 1.8E-49 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VSVS12_00702 d6153c803dd004d20786bfc781e94797 637 PRINTS PR00738 Glycosyl hydrolase family 20 signature 422 435 1.8E-49 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VSVS12_00702 d6153c803dd004d20786bfc781e94797 637 PRINTS PR00738 Glycosyl hydrolase family 20 signature 351 368 1.8E-49 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VSVS12_00702 d6153c803dd004d20786bfc781e94797 637 PRINTS PR00738 Glycosyl hydrolase family 20 signature 569 585 1.8E-49 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VSVS12_00702 d6153c803dd004d20786bfc781e94797 637 PRINTS PR00738 Glycosyl hydrolase family 20 signature 215 235 1.8E-49 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VSVS12_00702 d6153c803dd004d20786bfc781e94797 637 PRINTS PR00738 Glycosyl hydrolase family 20 signature 400 418 1.8E-49 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VSVS12_00702 d6153c803dd004d20786bfc781e94797 637 PRINTS PR00738 Glycosyl hydrolase family 20 signature 281 302 1.8E-49 T 11-10-2018 IPR025705 Beta-hexosaminidase GO:0004563|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883|Reactome: R-HSA-1660662|Reactome: R-HSA-2022857|Reactome: R-HSA-2024101|Reactome: R-HSA-2160916 VSVS12_00702 d6153c803dd004d20786bfc781e94797 637 Pfam PF02838 Glycosyl hydrolase family 20, domain 2 135 255 5.8E-15 T 11-10-2018 IPR015882 Beta-hexosaminidase, bacterial type, N-terminal VSVS12_00702 d6153c803dd004d20786bfc781e94797 637 Gene3D G3DSA:3.30.379.10 129 254 4.4E-21 T 11-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 VSVS12_00702 d6153c803dd004d20786bfc781e94797 637 Pfam PF00728 Glycosyl hydrolase family 20, catalytic domain 258 605 1.4E-116 T 11-10-2018 IPR015883 Glycoside hydrolase family 20, catalytic domain GO:0004553|GO:0005975 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822|MetaCyc: PWY-7883 VSVS12_00702 d6153c803dd004d20786bfc781e94797 637 Gene3D G3DSA:3.20.20.80 256 634 4.0E-134 T 11-10-2018 VSVS12_00702 d6153c803dd004d20786bfc781e94797 637 SUPERFAMILY SSF51445 258 618 1.2E-125 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily VSVS12_00702 d6153c803dd004d20786bfc781e94797 637 SUPERFAMILY SSF55545 130 257 1.44E-22 T 11-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 VSVS12_02767 811ed518255cae214278d30390886bd9 246 Gene3D G3DSA:2.60.440.10 6 245 1.1E-82 T 11-10-2018 IPR027462 Z ring-associated protein D, C-terminal VSVS12_02767 811ed518255cae214278d30390886bd9 246 Gene3D G3DSA:1.10.3900.10 12 178 1.1E-82 T 11-10-2018 VSVS12_02767 811ed518255cae214278d30390886bd9 246 Hamap MF_01092 Cell division protein ZapD [zapD]. 3 245 32.142 T 11-10-2018 IPR009777 Cell division protein ZapD VSVS12_02767 811ed518255cae214278d30390886bd9 246 Pfam PF07072 Cell division protein 18 224 3.0E-75 T 11-10-2018 IPR009777 Cell division protein ZapD VSVS12_02767 811ed518255cae214278d30390886bd9 246 SUPERFAMILY SSF160950 1 245 1.03E-91 T 11-10-2018 IPR036268 ZapD domain superfamily VSVS12_01523 41e1beef5d915c030cc69bc75094eafb 299 SUPERFAMILY SSF103481 47 146 1.09E-17 T 11-10-2018 VSVS12_01523 41e1beef5d915c030cc69bc75094eafb 299 SUPERFAMILY SSF103481 191 290 5.23E-14 T 11-10-2018 VSVS12_01523 41e1beef5d915c030cc69bc75094eafb 299 Pfam PF00892 EamA-like transporter family 157 287 2.0E-8 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VSVS12_01523 41e1beef5d915c030cc69bc75094eafb 299 Pfam PF00892 EamA-like transporter family 12 142 7.0E-15 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VSVS12_03544 11b76562a1e10524672d4efc57c9d26c 535 SUPERFAMILY SSF55874 412 529 4.32E-22 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_03544 11b76562a1e10524672d4efc57c9d26c 535 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 320 372 1.1E-10 T 11-10-2018 IPR039506 SpoOB, alpha-helical domain VSVS12_03544 11b76562a1e10524672d4efc57c9d26c 535 SMART SM00091 213 279 5.0E-5 T 11-10-2018 IPR000014 PAS domain VSVS12_03544 11b76562a1e10524672d4efc57c9d26c 535 SUPERFAMILY SSF103190 38 168 7.85E-35 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VSVS12_03544 11b76562a1e10524672d4efc57c9d26c 535 Pfam PF00989 PAS fold 214 296 1.3E-5 T 11-10-2018 IPR013767 PAS fold GO:0006355 VSVS12_03544 11b76562a1e10524672d4efc57c9d26c 535 Gene3D G3DSA:3.30.450.20 33 164 6.4E-38 T 11-10-2018 VSVS12_03544 11b76562a1e10524672d4efc57c9d26c 535 SUPERFAMILY SSF55890 322 392 1.14E-11 T 11-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 VSVS12_03544 11b76562a1e10524672d4efc57c9d26c 535 Gene3D G3DSA:3.30.565.10 373 532 6.2E-22 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_03544 11b76562a1e10524672d4efc57c9d26c 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 461 475 2.6E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_03544 11b76562a1e10524672d4efc57c9d26c 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 492 510 2.6E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_03544 11b76562a1e10524672d4efc57c9d26c 535 PRINTS PR00344 Bacterial sensor protein C-terminal signature 516 529 2.6E-8 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_03544 11b76562a1e10524672d4efc57c9d26c 535 Pfam PF17203 Single cache domain 3 37 168 1.3E-17 T 11-10-2018 IPR033463 Single cache domain 3 VSVS12_03544 11b76562a1e10524672d4efc57c9d26c 535 Gene3D G3DSA:3.30.450.20 199 313 4.6E-22 T 11-10-2018 VSVS12_03544 11b76562a1e10524672d4efc57c9d26c 535 SMART SM00387 418 532 3.8E-14 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_03544 11b76562a1e10524672d4efc57c9d26c 535 Pfam PF14501 GHKL domain 419 517 5.2E-13 T 11-10-2018 IPR032834 Sensor histidine kinase NatK, C-terminal domain VSVS12_03544 11b76562a1e10524672d4efc57c9d26c 535 SUPERFAMILY SSF55785 206 309 9.22E-9 T 11-10-2018 IPR035965 PAS domain superfamily VSVS12_03788 3f9df4307c3f4c7773c83633a65c8b4b 663 Pfam PF02780 Transketolase, C-terminal domain 540 654 5.5E-20 T 11-10-2018 IPR033248 Transketolase, C-terminal domain VSVS12_03788 3f9df4307c3f4c7773c83633a65c8b4b 663 ProSitePatterns PS00802 Transketolase signature 2. 466 482 - T 11-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VSVS12_03788 3f9df4307c3f4c7773c83633a65c8b4b 663 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 332 6.4E-166 T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VSVS12_03788 3f9df4307c3f4c7773c83633a65c8b4b 663 SUPERFAMILY SSF52518 6 318 4.87E-120 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold VSVS12_03788 3f9df4307c3f4c7773c83633a65c8b4b 663 Gene3D G3DSA:3.40.50.970 2 324 1.1E-130 T 11-10-2018 VSVS12_03788 3f9df4307c3f4c7773c83633a65c8b4b 663 SUPERFAMILY SSF52518 347 526 8.1E-68 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold VSVS12_03788 3f9df4307c3f4c7773c83633a65c8b4b 663 Pfam PF02779 Transketolase, pyrimidine binding domain 353 523 1.8E-47 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VSVS12_03788 3f9df4307c3f4c7773c83633a65c8b4b 663 SMART SM00861 353 524 3.4E-67 T 11-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain VSVS12_03788 3f9df4307c3f4c7773c83633a65c8b4b 663 Gene3D G3DSA:3.40.50.920 537 663 6.5E-45 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VSVS12_03788 3f9df4307c3f4c7773c83633a65c8b4b 663 SUPERFAMILY SSF52922 532 663 2.49E-43 T 11-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 VSVS12_03788 3f9df4307c3f4c7773c83633a65c8b4b 663 TIGRFAM TIGR00232 tktlase_bact: transketolase 6 662 0.0 T 11-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 VSVS12_03788 3f9df4307c3f4c7773c83633a65c8b4b 663 Gene3D G3DSA:3.40.50.970 325 536 3.4E-84 T 11-10-2018 VSVS12_03788 3f9df4307c3f4c7773c83633a65c8b4b 663 ProSitePatterns PS00801 Transketolase signature 1. 11 31 - T 11-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 VSVS12_00531 779c67ce5269049682238fe560c1ae86 232 Pfam PF09335 SNARE associated Golgi protein 54 173 6.6E-16 T 11-10-2018 IPR032816 SNARE associated Golgi protein VSVS12_04306 9a5b4584a11f27e924f3d1607f1d1f84 364 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 4 339 6.0E-67 T 11-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 VSVS12_04306 9a5b4584a11f27e924f3d1607f1d1f84 364 SUPERFAMILY SSF51395 2 350 3.66E-99 T 11-10-2018 VSVS12_04306 9a5b4584a11f27e924f3d1607f1d1f84 364 Gene3D G3DSA:3.20.20.70 2 363 2.4E-109 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_02442 fba16d56647b00e75cb47b4a79a267c3 487 SMART SM01240 7 473 0.0 T 11-10-2018 VSVS12_02442 fba16d56647b00e75cb47b4a79a267c3 487 Pfam PF00571 CBS domain 153 201 0.0031 T 11-10-2018 IPR000644 CBS domain VSVS12_02442 fba16d56647b00e75cb47b4a79a267c3 487 Pfam PF00571 CBS domain 95 140 6.4E-11 T 11-10-2018 IPR000644 CBS domain VSVS12_02442 fba16d56647b00e75cb47b4a79a267c3 487 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 83.787 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 VSVS12_02442 fba16d56647b00e75cb47b4a79a267c3 487 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 11-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 VSVS12_02442 fba16d56647b00e75cb47b4a79a267c3 487 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 1.3E-161 T 11-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 VSVS12_02442 fba16d56647b00e75cb47b4a79a267c3 487 SMART SM00116 96 144 3.0E-12 T 11-10-2018 IPR000644 CBS domain VSVS12_02442 fba16d56647b00e75cb47b4a79a267c3 487 SMART SM00116 158 206 3.2E-4 T 11-10-2018 IPR000644 CBS domain VSVS12_02442 fba16d56647b00e75cb47b4a79a267c3 487 SUPERFAMILY SSF54631 95 203 3.41E-25 T 11-10-2018 VSVS12_02442 fba16d56647b00e75cb47b4a79a267c3 487 SUPERFAMILY SSF51412 1 477 2.09E-123 T 11-10-2018 VSVS12_02442 fba16d56647b00e75cb47b4a79a267c3 487 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 2.7E-194 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 VSVS12_02442 fba16d56647b00e75cb47b4a79a267c3 487 PIRSF PIRSF000130 1 487 5.9E-200 T 11-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 VSVS12_02442 fba16d56647b00e75cb47b4a79a267c3 487 Gene3D G3DSA:3.20.20.70 1 486 1.7E-209 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_03794 db7a16cbf20d9c45f33a8dd43b48cd4b 251 SUPERFAMILY SSF69572 4 249 1.96E-83 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 VSVS12_03794 db7a16cbf20d9c45f33a8dd43b48cd4b 251 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 8 248 6.4E-127 T 11-10-2018 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823 VSVS12_03794 db7a16cbf20d9c45f33a8dd43b48cd4b 251 Pfam PF00899 ThiF family 12 245 5.6E-62 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VSVS12_03794 db7a16cbf20d9c45f33a8dd43b48cd4b 251 Gene3D G3DSA:3.40.50.720 4 251 1.5E-85 T 11-10-2018 VSVS12_04157 5f3343ccf2be136c96bb39e62ad4f3d0 328 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 121 8.4E-25 T 11-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 VSVS12_04157 5f3343ccf2be136c96bb39e62ad4f3d0 328 Gene3D G3DSA:3.40.50.720 1 138 1.2E-34 T 11-10-2018 VSVS12_04157 5f3343ccf2be136c96bb39e62ad4f3d0 328 SUPERFAMILY SSF51735 2 156 1.03E-41 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_04157 5f3343ccf2be136c96bb39e62ad4f3d0 328 Gene3D G3DSA:3.30.360.10 139 328 1.4E-48 T 11-10-2018 VSVS12_04157 5f3343ccf2be136c96bb39e62ad4f3d0 328 SUPERFAMILY SSF55347 134 294 7.68E-20 T 11-10-2018 VSVS12_02562 20a6f11427a6e538bbd8f320a56fa960 396 Pfam PF01098 Cell cycle protein 26 381 6.1E-114 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VSVS12_02562 20a6f11427a6e538bbd8f320a56fa960 396 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 24 380 1.6E-129 T 11-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VSVS12_02562 20a6f11427a6e538bbd8f320a56fa960 396 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 339 363 - T 11-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VSVS12_02562 20a6f11427a6e538bbd8f320a56fa960 396 Hamap MF_00913 Probable peptidoglycan glycosyltransferase FtsW [ftsW]. 22 389 41.282 T 11-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VSVS12_01779 3c818d27a694ba22525bb1ba1c5e1af6 313 Gene3D G3DSA:3.40.50.2000 202 313 3.1E-29 T 11-10-2018 VSVS12_01779 3c818d27a694ba22525bb1ba1c5e1af6 313 SUPERFAMILY SSF53756 11 313 4.77E-14 T 11-10-2018 VSVS12_00767 b0aaa5db00a2feea928c4abb0518554f 371 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 5 369 42.38 T 11-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 VSVS12_00767 b0aaa5db00a2feea928c4abb0518554f 371 Gene3D G3DSA:3.30.420.40 12 364 8.7E-137 T 11-10-2018 VSVS12_00767 b0aaa5db00a2feea928c4abb0518554f 371 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 5 369 4.0E-171 T 11-10-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 MetaCyc: PWY-7883 VSVS12_00767 b0aaa5db00a2feea928c4abb0518554f 371 SUPERFAMILY SSF53067 7 343 2.73E-25 T 11-10-2018 VSVS12_00767 b0aaa5db00a2feea928c4abb0518554f 371 Gene3D G3DSA:3.30.420.40 146 329 8.7E-137 T 11-10-2018 VSVS12_00436 0b97897049e2522effac29e6795bf790 313 TIGRFAM TIGR01175 pilM: type IV pilus assembly protein PilM 4 216 9.0E-46 T 11-10-2018 IPR005883 Type IV pilus assembly protein PilM VSVS12_00436 0b97897049e2522effac29e6795bf790 313 Gene3D G3DSA:3.30.420.40 3 127 2.0E-6 T 11-10-2018 VSVS12_00436 0b97897049e2522effac29e6795bf790 313 PIRSF PIRSF019169 1 219 2.2E-48 T 11-10-2018 IPR005883 Type IV pilus assembly protein PilM VSVS12_00436 0b97897049e2522effac29e6795bf790 313 PIRSF PIRSF019169 216 313 2.5E-10 T 11-10-2018 IPR005883 Type IV pilus assembly protein PilM VSVS12_00436 0b97897049e2522effac29e6795bf790 313 Pfam PF11104 Type IV pilus assembly protein PilM; 8 197 2.9E-30 T 11-10-2018 IPR005883 Type IV pilus assembly protein PilM VSVS12_01750 232341daf7935387fb2afc3d4ca7af16 377 SUPERFAMILY SSF56219 46 374 5.76E-33 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VSVS12_01750 232341daf7935387fb2afc3d4ca7af16 377 Gene3D G3DSA:3.60.10.10 42 373 4.1E-32 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VSVS12_01750 232341daf7935387fb2afc3d4ca7af16 377 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 86 366 3.6E-14 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase VSVS12_03616 2fbe41e425fa30ef6d8bce1b6991dfd6 525 SUPERFAMILY SSF55785 26 121 5.93E-23 T 11-10-2018 IPR035965 PAS domain superfamily VSVS12_03616 2fbe41e425fa30ef6d8bce1b6991dfd6 525 Gene3D G3DSA:1.10.287.950 199 524 5.4E-61 T 11-10-2018 VSVS12_03616 2fbe41e425fa30ef6d8bce1b6991dfd6 525 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 336 490 1.2E-41 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_03616 2fbe41e425fa30ef6d8bce1b6991dfd6 525 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 11 116 1.5E-11 T 11-10-2018 IPR000014 PAS domain VSVS12_03616 2fbe41e425fa30ef6d8bce1b6991dfd6 525 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 389 418 1.4E-7 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VSVS12_03616 2fbe41e425fa30ef6d8bce1b6991dfd6 525 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 276 305 1.4E-7 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VSVS12_03616 2fbe41e425fa30ef6d8bce1b6991dfd6 525 SMART SM00283 266 523 1.4E-60 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_03616 2fbe41e425fa30ef6d8bce1b6991dfd6 525 Pfam PF08447 PAS fold 37 121 1.3E-12 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 VSVS12_03616 2fbe41e425fa30ef6d8bce1b6991dfd6 525 Gene3D G3DSA:3.30.450.20 3 122 1.6E-21 T 11-10-2018 VSVS12_03616 2fbe41e425fa30ef6d8bce1b6991dfd6 525 SUPERFAMILY SSF58104 268 523 3.92E-69 T 11-10-2018 VSVS12_04584 4c56f58290190c30901b59a92e0f5872 157 SUPERFAMILY SSF53041 1 109 9.02E-29 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 VSVS12_04584 4c56f58290190c30901b59a92e0f5872 157 Pfam PF00239 Resolvase, N terminal domain 3 110 8.6E-28 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VSVS12_04584 4c56f58290190c30901b59a92e0f5872 157 Gene3D G3DSA:3.40.50.1390 1 120 2.9E-32 T 11-10-2018 VSVS12_04584 4c56f58290190c30901b59a92e0f5872 157 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 VSVS12_04584 4c56f58290190c30901b59a92e0f5872 157 SMART SM00857 2 130 6.6E-29 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VSVS12_03459 bc0a0ef036f52af9e361c135718c803e 512 Pfam PF00753 Metallo-beta-lactamase superfamily 34 175 6.0E-9 T 11-10-2018 IPR001279 Metallo-beta-lactamase VSVS12_03459 bc0a0ef036f52af9e361c135718c803e 512 SUPERFAMILY SSF57802 444 496 1.68E-16 T 11-10-2018 VSVS12_03459 bc0a0ef036f52af9e361c135718c803e 512 Gene3D G3DSA:3.60.15.10 1 247 3.7E-104 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VSVS12_03459 bc0a0ef036f52af9e361c135718c803e 512 Pfam PF00301 Rubredoxin 447 492 4.4E-17 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 VSVS12_03459 bc0a0ef036f52af9e361c135718c803e 512 Gene3D G3DSA:3.40.50.360 253 395 4.7E-39 T 11-10-2018 IPR029039 Flavoprotein-like superfamily VSVS12_03459 bc0a0ef036f52af9e361c135718c803e 512 Gene3D G3DSA:2.20.28.10 445 497 7.4E-20 T 11-10-2018 VSVS12_03459 bc0a0ef036f52af9e361c135718c803e 512 Pfam PF00258 Flavodoxin 256 388 6.5E-12 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VSVS12_03459 bc0a0ef036f52af9e361c135718c803e 512 SUPERFAMILY SSF56281 8 280 4.2E-52 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VSVS12_03459 bc0a0ef036f52af9e361c135718c803e 512 PRINTS PR00163 Rubredoxin signature 446 462 5.3E-5 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 VSVS12_03459 bc0a0ef036f52af9e361c135718c803e 512 PRINTS PR00163 Rubredoxin signature 476 492 5.3E-5 T 11-10-2018 IPR024935 Rubredoxin domain GO:0005506 VSVS12_03459 bc0a0ef036f52af9e361c135718c803e 512 SUPERFAMILY SSF52218 251 398 8.06E-36 T 11-10-2018 IPR029039 Flavoprotein-like superfamily VSVS12_03459 bc0a0ef036f52af9e361c135718c803e 512 SMART SM00849 34 209 2.2E-27 T 11-10-2018 IPR001279 Metallo-beta-lactamase VSVS12_02612 0057a77c4fa2861241545ceb047b992c 458 TIGRFAM TIGR00797 matE: MATE efflux family protein 26 421 1.3E-45 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VSVS12_02612 0057a77c4fa2861241545ceb047b992c 458 Pfam PF01554 MatE 26 187 8.0E-21 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VSVS12_02612 0057a77c4fa2861241545ceb047b992c 458 Pfam PF01554 MatE 251 409 1.1E-12 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VSVS12_02612 0057a77c4fa2861241545ceb047b992c 458 PIRSF PIRSF006603 9 448 9.1E-67 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VSVS12_00686 02568fb526e4be78995ca81ff99b3f42 788 Gene3D G3DSA:3.30.2060.10 89 178 5.0E-257 T 11-10-2018 VSVS12_00686 02568fb526e4be78995ca81ff99b3f42 788 Gene3D G3DSA:3.40.710.10 81 738 5.0E-257 T 11-10-2018 VSVS12_00686 02568fb526e4be78995ca81ff99b3f42 788 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 191 725 6.5E-158 T 11-10-2018 VSVS12_00686 02568fb526e4be78995ca81ff99b3f42 788 SUPERFAMILY SSF53955 184 379 1.83E-68 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily VSVS12_00686 02568fb526e4be78995ca81ff99b3f42 788 Gene3D G3DSA:1.10.3810.10 179 382 5.0E-257 T 11-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VSVS12_00686 02568fb526e4be78995ca81ff99b3f42 788 SUPERFAMILY SSF56601 340 781 1.17E-107 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VSVS12_00686 02568fb526e4be78995ca81ff99b3f42 788 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 46 769 0.0 T 11-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VSVS12_00686 02568fb526e4be78995ca81ff99b3f42 788 Pfam PF14814 Bifunctional transglycosylase second domain 91 174 7.0E-25 T 11-10-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VSVS12_00686 02568fb526e4be78995ca81ff99b3f42 788 Pfam PF00912 Transglycosylase 187 358 3.4E-59 T 11-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VSVS12_00686 02568fb526e4be78995ca81ff99b3f42 788 Pfam PF00905 Penicillin binding protein transpeptidase domain 449 688 1.7E-23 T 11-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 VSVS12_00686 02568fb526e4be78995ca81ff99b3f42 788 PIRSF PIRSF002799 14 788 0.0 T 11-10-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00550+2.4.1.129+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VSVS12_04555 f60cd7be349fa116b3d1f67a6f4858a9 367 SUPERFAMILY SSF140931 95 293 1.12E-38 T 11-10-2018 IPR036597 Fido-like domain superfamily VSVS12_04555 f60cd7be349fa116b3d1f67a6f4858a9 367 Gene3D G3DSA:1.10.3290.10 34 291 3.5E-45 T 11-10-2018 IPR036597 Fido-like domain superfamily VSVS12_04555 f60cd7be349fa116b3d1f67a6f4858a9 367 Pfam PF13776 Domain of unknown function (DUF4172) 2 82 8.6E-30 T 11-10-2018 IPR025230 Domain of unknown function DUF4172 VSVS12_04555 f60cd7be349fa116b3d1f67a6f4858a9 367 Pfam PF02661 Fic/DOC family 111 223 1.9E-15 T 11-10-2018 IPR003812 Fido domain VSVS12_02333 4c4252bce072eafdde5b0f42f00a5043 258 Pfam PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) 1 256 1.0E-112 T 11-10-2018 IPR016908 Uncharacterised conserved protein UCP029037 VSVS12_02333 4c4252bce072eafdde5b0f42f00a5043 258 PIRSF PIRSF029037 1 258 1.2E-113 T 11-10-2018 IPR016908 Uncharacterised conserved protein UCP029037 VSVS12_03018 0b4708bdcf08c18499cb2bee2640336a 77 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 73 6.1E-14 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VSVS12_03018 0b4708bdcf08c18499cb2bee2640336a 77 SUPERFAMILY SSF51905 4 75 1.57E-16 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_03018 0b4708bdcf08c18499cb2bee2640336a 77 Gene3D G3DSA:3.50.50.60 1 76 9.2E-25 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_03018 0b4708bdcf08c18499cb2bee2640336a 77 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 51 76 3.7E-10 T 11-10-2018 VSVS12_03018 0b4708bdcf08c18499cb2bee2640336a 77 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 15 24 3.7E-10 T 11-10-2018 VSVS12_03018 0b4708bdcf08c18499cb2bee2640336a 77 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 51 69 3.8E-7 T 11-10-2018 VSVS12_03018 0b4708bdcf08c18499cb2bee2640336a 77 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 30 3.8E-7 T 11-10-2018 VSVS12_02228 1181fb7bd588921609ac571d9171d15f 309 Gene3D G3DSA:3.40.190.290 108 308 2.8E-72 T 11-10-2018 VSVS12_02228 1181fb7bd588921609ac571d9171d15f 309 SUPERFAMILY SSF53850 107 305 2.79E-38 T 11-10-2018 VSVS12_02228 1181fb7bd588921609ac571d9171d15f 309 Pfam PF03466 LysR substrate binding domain 106 304 1.3E-40 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_02228 1181fb7bd588921609ac571d9171d15f 309 Gene3D G3DSA:1.10.10.10 19 107 3.9E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_02228 1181fb7bd588921609ac571d9171d15f 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 21 80 2.3E-13 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_02228 1181fb7bd588921609ac571d9171d15f 309 SUPERFAMILY SSF46785 19 102 6.08E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_01412 8a3e95ff3b2ba08de4c7e33b80a8e3c1 396 Gene3D G3DSA:3.40.50.1100 53 383 6.0E-183 T 11-10-2018 VSVS12_01412 8a3e95ff3b2ba08de4c7e33b80a8e3c1 396 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 79 93 - T 11-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VSVS12_01412 8a3e95ff3b2ba08de4c7e33b80a8e3c1 396 PIRSF PIRSF001413 1 395 6.3E-167 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VSVS12_01412 8a3e95ff3b2ba08de4c7e33b80a8e3c1 396 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 6 388 2.3E-193 T 11-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VSVS12_01412 8a3e95ff3b2ba08de4c7e33b80a8e3c1 396 SUPERFAMILY SSF53686 5 387 2.62E-141 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VSVS12_01412 8a3e95ff3b2ba08de4c7e33b80a8e3c1 396 Gene3D G3DSA:3.40.50.1100 9 204 6.0E-183 T 11-10-2018 VSVS12_01412 8a3e95ff3b2ba08de4c7e33b80a8e3c1 396 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 51 373 2.0E-49 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VSVS12_01412 8a3e95ff3b2ba08de4c7e33b80a8e3c1 396 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 1 390 49.597 T 11-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 VSVS12_01747 49cf23aec4f0705b0bcefdddc9d666d2 418 Gene3D G3DSA:1.10.300.10 99 200 2.5E-72 T 11-10-2018 VSVS12_01747 49cf23aec4f0705b0bcefdddc9d666d2 418 Pfam PF00709 Adenylosuccinate synthetase 4 416 6.6E-129 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VSVS12_01747 49cf23aec4f0705b0bcefdddc9d666d2 418 Gene3D G3DSA:3.40.440.10 6 255 2.5E-72 T 11-10-2018 VSVS12_01747 49cf23aec4f0705b0bcefdddc9d666d2 418 Gene3D G3DSA:3.90.170.10 266 418 1.0E-49 T 11-10-2018 VSVS12_01747 49cf23aec4f0705b0bcefdddc9d666d2 418 SMART SM00788 3 417 3.9E-173 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VSVS12_01747 49cf23aec4f0705b0bcefdddc9d666d2 418 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 418 140.139 T 11-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 VSVS12_01747 49cf23aec4f0705b0bcefdddc9d666d2 418 SUPERFAMILY SSF52540 1 418 1.17E-120 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01617 1e6f2c68098260c36930bedd3bf74aeb 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.7E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_01617 1e6f2c68098260c36930bedd3bf74aeb 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.7E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_01617 1e6f2c68098260c36930bedd3bf74aeb 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.7E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_01617 1e6f2c68098260c36930bedd3bf74aeb 298 SUPERFAMILY SSF53850 90 288 9.01E-39 T 11-10-2018 VSVS12_01617 1e6f2c68098260c36930bedd3bf74aeb 298 Pfam PF03466 LysR substrate binding domain 88 286 3.6E-41 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_01617 1e6f2c68098260c36930bedd3bf74aeb 298 SUPERFAMILY SSF46785 1 85 5.65E-24 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_01617 1e6f2c68098260c36930bedd3bf74aeb 298 Gene3D G3DSA:3.40.190.290 90 291 8.6E-46 T 11-10-2018 VSVS12_01617 1e6f2c68098260c36930bedd3bf74aeb 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.5E-19 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_01617 1e6f2c68098260c36930bedd3bf74aeb 298 Gene3D G3DSA:1.10.10.10 1 83 5.9E-29 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_00371 e0ad9c9ddc75634bd6d357b8e709bb63 72 ProSitePatterns PS01143 Ribosomal protein L31 signature. 36 57 - T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00371 e0ad9c9ddc75634bd6d357b8e709bb63 72 Pfam PF01197 Ribosomal protein L31 1 66 2.4E-32 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00371 e0ad9c9ddc75634bd6d357b8e709bb63 72 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 69 31.761 T 11-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00371 e0ad9c9ddc75634bd6d357b8e709bb63 72 SUPERFAMILY SSF143800 1 68 3.06E-27 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00371 e0ad9c9ddc75634bd6d357b8e709bb63 72 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 67 5.3E-35 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00371 e0ad9c9ddc75634bd6d357b8e709bb63 72 PRINTS PR01249 Ribosomal protein L31 signature 32 47 3.6E-23 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00371 e0ad9c9ddc75634bd6d357b8e709bb63 72 PRINTS PR01249 Ribosomal protein L31 signature 2 19 3.6E-23 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00371 e0ad9c9ddc75634bd6d357b8e709bb63 72 PRINTS PR01249 Ribosomal protein L31 signature 47 65 3.6E-23 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00371 e0ad9c9ddc75634bd6d357b8e709bb63 72 Gene3D G3DSA:2.30.170.50 1 71 2.2E-33 T 11-10-2018 VSVS12_00642 474979e3e8fc7c58ad78ca9cf0f13fef 329 Gene3D G3DSA:3.40.718.10 1 329 5.8E-121 T 11-10-2018 VSVS12_00642 474979e3e8fc7c58ad78ca9cf0f13fef 329 SUPERFAMILY SSF53659 3 326 4.48E-111 T 11-10-2018 VSVS12_00642 474979e3e8fc7c58ad78ca9cf0f13fef 329 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 3 328 35.835 T 11-10-2018 IPR037510 4-hydroxythreonine-4-phosphate dehydrogenase GO:0042823|GO:0050570 KEGG: 00750+1.1.1.262 VSVS12_00642 474979e3e8fc7c58ad78ca9cf0f13fef 329 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 5 324 2.7E-126 T 11-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 VSVS12_00642 474979e3e8fc7c58ad78ca9cf0f13fef 329 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 32 321 5.7E-105 T 11-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 VSVS12_04178 bc56319715c5122d084acd41cd11e1b3 286 SUPERFAMILY SSF46785 5 89 1.36E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_04178 bc56319715c5122d084acd41cd11e1b3 286 Gene3D G3DSA:3.40.190.290 92 284 3.5E-37 T 11-10-2018 VSVS12_04178 bc56319715c5122d084acd41cd11e1b3 286 SUPERFAMILY SSF53850 91 285 2.9E-30 T 11-10-2018 VSVS12_04178 bc56319715c5122d084acd41cd11e1b3 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 2.3E-14 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_04178 bc56319715c5122d084acd41cd11e1b3 286 Pfam PF03466 LysR substrate binding domain 91 285 3.4E-26 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_04178 bc56319715c5122d084acd41cd11e1b3 286 Gene3D G3DSA:1.10.10.10 3 90 4.3E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_01907 a2bd1755a4c8f483c4700d22691d9332 481 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 20 481 5.2E-207 T 11-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 VSVS12_01907 a2bd1755a4c8f483c4700d22691d9332 481 Gene3D G3DSA:3.30.930.10 124 480 3.0E-110 T 11-10-2018 VSVS12_01907 a2bd1755a4c8f483c4700d22691d9332 481 SUPERFAMILY SSF50249 30 116 5.57E-17 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_01907 a2bd1755a4c8f483c4700d22691d9332 481 Pfam PF00152 tRNA synthetases class II (D, K and N) 134 475 1.5E-81 T 11-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 VSVS12_01907 a2bd1755a4c8f483c4700d22691d9332 481 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 21 481 46.006 T 11-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 VSVS12_01907 a2bd1755a4c8f483c4700d22691d9332 481 SUPERFAMILY SSF55681 111 479 1.25E-95 T 11-10-2018 VSVS12_01907 a2bd1755a4c8f483c4700d22691d9332 481 Pfam PF01336 OB-fold nucleic acid binding domain 35 114 1.5E-10 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VSVS12_01907 a2bd1755a4c8f483c4700d22691d9332 481 Gene3D G3DSA:2.40.50.140 11 121 3.3E-19 T 11-10-2018 VSVS12_01907 a2bd1755a4c8f483c4700d22691d9332 481 PRINTS PR01042 Aspartyl-tRNA synthetase signature 396 412 1.3E-14 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VSVS12_01907 a2bd1755a4c8f483c4700d22691d9332 481 PRINTS PR01042 Aspartyl-tRNA synthetase signature 239 252 1.3E-14 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VSVS12_01907 a2bd1755a4c8f483c4700d22691d9332 481 PRINTS PR01042 Aspartyl-tRNA synthetase signature 223 235 1.3E-14 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VSVS12_01907 a2bd1755a4c8f483c4700d22691d9332 481 PRINTS PR01042 Aspartyl-tRNA synthetase signature 436 450 1.3E-14 T 11-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 VSVS12_01364 654cff51db1eced6386996f2877196b9 175 Pfam PF09835 Uncharacterized protein conserved in bacteria (DUF2062) 23 164 3.2E-45 T 11-10-2018 IPR018639 Domain of unknown function DUF2062 VSVS12_02747 b91d02f9989b3ad2d60bcb48279a18ac 84 TIGRFAM TIGR01195 oadG_fam: sodium pump decarboxylases, gamma subunit 7 82 9.2E-21 T 11-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 VSVS12_02747 b91d02f9989b3ad2d60bcb48279a18ac 84 Pfam PF04277 Oxaloacetate decarboxylase, gamma chain 10 79 9.5E-20 T 11-10-2018 IPR005899 Sodium ion-translocating decarboxylase GO:0008948|GO:0015081|GO:0016020|GO:0036376 KEGG: 00620+4.1.1.3 VSVS12_02747 b91d02f9989b3ad2d60bcb48279a18ac 84 Hamap MF_00404 Probable oxaloacetate decarboxylase gamma chain [oadG]. 1 84 33.694 T 11-10-2018 IPR023424 Oxaloacetate decarboxylase gamma chain, probable GO:0008948 KEGG: 00620+4.1.1.3 VSVS12_02617 a57f4b12e1f440a567679cd83c7104d2 232 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 230 48.03 T 11-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VSVS12_02617 a57f4b12e1f440a567679cd83c7104d2 232 Gene3D G3DSA:3.40.50.1580 1 232 9.2E-69 T 11-10-2018 VSVS12_02617 a57f4b12e1f440a567679cd83c7104d2 232 Pfam PF01048 Phosphorylase superfamily 2 227 1.3E-50 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VSVS12_02617 a57f4b12e1f440a567679cd83c7104d2 232 SUPERFAMILY SSF53167 1 230 1.96E-73 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 VSVS12_02617 a57f4b12e1f440a567679cd83c7104d2 232 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 228 3.1E-100 T 11-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VSVS12_00307 a84f484c5517da6d276414fc05229f26 277 Gene3D G3DSA:3.40.50.1820 7 272 1.1E-67 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold VSVS12_00307 a84f484c5517da6d276414fc05229f26 277 Pfam PF00561 alpha/beta hydrolase fold 22 260 1.3E-23 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VSVS12_00307 a84f484c5517da6d276414fc05229f26 277 SUPERFAMILY SSF53474 11 270 5.45E-52 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold VSVS12_00307 a84f484c5517da6d276414fc05229f26 277 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 11 272 44.155 T 11-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 VSVS12_00307 a84f484c5517da6d276414fc05229f26 277 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 18 270 1.0E-94 T 11-10-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 VSVS12_02584 f6ca60a2b1cea9b32c58b06debfbc706 367 Hamap MF_01919 Cell division protein ZapE [zapE]. 1 367 53.456 T 11-10-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 VSVS12_02584 f6ca60a2b1cea9b32c58b06debfbc706 367 Pfam PF03969 AFG1-like ATPase 1 364 3.0E-151 T 11-10-2018 IPR005654 ATPase, AFG1-like GO:0005524 VSVS12_02584 f6ca60a2b1cea9b32c58b06debfbc706 367 Gene3D G3DSA:3.40.50.300 6 193 1.2E-20 T 11-10-2018 VSVS12_02584 f6ca60a2b1cea9b32c58b06debfbc706 367 SUPERFAMILY SSF52540 61 201 1.94E-13 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02765 d6bc89851d2aac00736cd295dedd73b8 195 Gene3D G3DSA:1.20.120.1220 31 187 2.9E-5 T 11-10-2018 VSVS12_02765 d6bc89851d2aac00736cd295dedd73b8 195 Pfam PF01478 Type IV leader peptidase family 41 150 1.1E-27 T 11-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 VSVS12_02765 d6bc89851d2aac00736cd295dedd73b8 195 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 49 66 6.4E-29 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial VSVS12_02765 d6bc89851d2aac00736cd295dedd73b8 195 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 107 117 6.4E-29 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial VSVS12_02765 d6bc89851d2aac00736cd295dedd73b8 195 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 130 145 6.4E-29 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial VSVS12_02765 d6bc89851d2aac00736cd295dedd73b8 195 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 118 129 6.4E-29 T 11-10-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial VSVS12_03787 bd80be175fd7802d269deece95d5f65f 85 Gene3D G3DSA:3.90.25.10 18 85 3.0E-24 T 11-10-2018 VSVS12_03787 bd80be175fd7802d269deece95d5f65f 85 SUPERFAMILY SSF51735 22 82 4.42E-12 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_03787 bd80be175fd7802d269deece95d5f65f 85 Pfam PF16363 GDP-mannose 4,6 dehydratase 21 71 5.2E-7 T 11-10-2018 IPR016040 NAD(P)-binding domain VSVS12_01012 ac5518395949fc7f28310c9e7148aea9 283 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 2.7E-116 T 11-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VSVS12_01012 ac5518395949fc7f28310c9e7148aea9 283 SUPERFAMILY SSF51569 2 279 1.56E-104 T 11-10-2018 VSVS12_01012 ac5518395949fc7f28310c9e7148aea9 283 Gene3D G3DSA:3.20.20.70 1 283 6.7E-101 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_01012 ac5518395949fc7f28310c9e7148aea9 283 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 48.42 T 11-10-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VSVS12_01012 ac5518395949fc7f28310c9e7148aea9 283 Pfam PF00793 DAHP synthetase I family 10 275 8.2E-71 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VSVS12_04285 bb29a3b6151c7d328a79d86c5c998eaf 202 Pfam PF14246 AefR-like transcriptional repressor, C-terminal region 146 199 3.0E-14 T 11-10-2018 IPR039536 Transcriptional regulator TetR, C-terminal, Proteobacteria type VSVS12_04285 bb29a3b6151c7d328a79d86c5c998eaf 202 Gene3D G3DSA:1.10.10.60 7 58 9.3E-20 T 11-10-2018 VSVS12_04285 bb29a3b6151c7d328a79d86c5c998eaf 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 1.1E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VSVS12_04285 bb29a3b6151c7d328a79d86c5c998eaf 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 1.1E-10 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VSVS12_04285 bb29a3b6151c7d328a79d86c5c998eaf 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 56 4.0E-17 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VSVS12_04285 bb29a3b6151c7d328a79d86c5c998eaf 202 SUPERFAMILY SSF46689 3 76 1.02E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_04285 bb29a3b6151c7d328a79d86c5c998eaf 202 Gene3D G3DSA:1.10.357.10 59 201 1.5E-30 T 11-10-2018 VSVS12_03456 98b29003c378867c9ac664e531856e71 469 PIRSF PIRSF004548 1 448 3.3E-141 T 11-10-2018 IPR010364 Uncharacterised protein family, inner membrane CreD VSVS12_03456 98b29003c378867c9ac664e531856e71 469 Pfam PF06123 Inner membrane protein CreD 9 429 1.6E-145 T 11-10-2018 IPR010364 Uncharacterised protein family, inner membrane CreD VSVS12_00978 3804ff7a8ccca03b3af4099463186eea 262 Pfam PF00460 Flagella basal body rod protein 5 35 7.6E-11 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VSVS12_00978 3804ff7a8ccca03b3af4099463186eea 262 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 261 2.4E-115 T 11-10-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 VSVS12_00978 3804ff7a8ccca03b3af4099463186eea 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 147 244 1.1E-30 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VSVS12_00978 3804ff7a8ccca03b3af4099463186eea 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 137 3.1E-39 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VSVS12_00978 3804ff7a8ccca03b3af4099463186eea 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 184 260 1.7E-24 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VSVS12_00978 3804ff7a8ccca03b3af4099463186eea 262 SUPERFAMILY SSF117143 92 223 1.7E-33 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like VSVS12_00978 3804ff7a8ccca03b3af4099463186eea 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site VSVS12_03294 daefe512db0a1a2472767f4c48c97201 251 Gene3D G3DSA:1.20.144.10 10 242 5.2E-49 T 11-10-2018 VSVS12_03294 daefe512db0a1a2472767f4c48c97201 251 Pfam PF01569 PAP2 superfamily 83 226 1.5E-20 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VSVS12_03294 daefe512db0a1a2472767f4c48c97201 251 SUPERFAMILY SSF48317 39 232 1.31E-23 T 11-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily VSVS12_03294 daefe512db0a1a2472767f4c48c97201 251 SMART SM00014 81 229 1.1E-13 T 11-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase VSVS12_00941 c936ffec04d7322d18d730647827e127 284 SUPERFAMILY SSF48452 118 247 6.45E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_00941 c936ffec04d7322d18d730647827e127 284 Gene3D G3DSA:1.25.40.10 113 196 2.3E-17 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_00941 c936ffec04d7322d18d730647827e127 284 Pfam PF14561 Tetratricopeptide repeat 195 284 4.5E-25 T 11-10-2018 VSVS12_00941 c936ffec04d7322d18d730647827e127 284 Gene3D G3DSA:3.40.30.10 2 112 1.6E-22 T 11-10-2018 VSVS12_00941 c936ffec04d7322d18d730647827e127 284 Pfam PF00085 Thioredoxin 6 108 1.7E-14 T 11-10-2018 IPR013766 Thioredoxin domain GO:0045454 VSVS12_00941 c936ffec04d7322d18d730647827e127 284 Pfam PF14559 Tetratricopeptide repeat 124 190 1.9E-10 T 11-10-2018 VSVS12_00941 c936ffec04d7322d18d730647827e127 284 SUPERFAMILY SSF52833 3 111 2.21E-24 T 11-10-2018 IPR036249 Thioredoxin-like superfamily VSVS12_00941 c936ffec04d7322d18d730647827e127 284 Gene3D G3DSA:1.25.40.10 197 284 1.4E-19 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_00251 8d18692e11b9f579dc0d7b1ac176b7f5 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 407 424 1.2E-30 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VSVS12_00251 8d18692e11b9f579dc0d7b1ac176b7f5 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 219 233 1.2E-30 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VSVS12_00251 8d18692e11b9f579dc0d7b1ac176b7f5 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 314 326 1.2E-30 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VSVS12_00251 8d18692e11b9f579dc0d7b1ac176b7f5 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 364 380 1.2E-30 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VSVS12_00251 8d18692e11b9f579dc0d7b1ac176b7f5 426 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 248 258 1.2E-30 T 11-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase VSVS12_00251 8d18692e11b9f579dc0d7b1ac176b7f5 426 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 313 324 - T 11-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 VSVS12_00251 8d18692e11b9f579dc0d7b1ac176b7f5 426 Gene3D G3DSA:3.30.70.1170 170 227 5.6E-25 T 11-10-2018 VSVS12_00251 8d18692e11b9f579dc0d7b1ac176b7f5 426 Gene3D G3DSA:1.10.940.10 1 141 9.9E-43 T 11-10-2018 IPR035926 NusB-like superfamily VSVS12_00251 8d18692e11b9f579dc0d7b1ac176b7f5 426 Gene3D G3DSA:1.10.287.730 143 169 5.0E-11 T 11-10-2018 VSVS12_00251 8d18692e11b9f579dc0d7b1ac176b7f5 426 Pfam PF01189 16S rRNA methyltransferase RsmB/F 238 422 2.2E-67 T 11-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 VSVS12_00251 8d18692e11b9f579dc0d7b1ac176b7f5 426 SUPERFAMILY SSF53335 139 424 9.88E-74 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_00251 8d18692e11b9f579dc0d7b1ac176b7f5 426 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 4 426 5.3E-147 T 11-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 VSVS12_00251 8d18692e11b9f579dc0d7b1ac176b7f5 426 Pfam PF01029 NusB family 1 123 2.5E-24 T 11-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 VSVS12_00251 8d18692e11b9f579dc0d7b1ac176b7f5 426 SUPERFAMILY SSF48013 1 146 1.3E-34 T 11-10-2018 IPR035926 NusB-like superfamily VSVS12_00251 8d18692e11b9f579dc0d7b1ac176b7f5 426 Gene3D G3DSA:3.40.50.150 228 425 2.1E-68 T 11-10-2018 VSVS12_01231 746e71c7e449f6dea5d88546730ab659 532 SMART SM00155 425 452 0.0047 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 VSVS12_01231 746e71c7e449f6dea5d88546730ab659 532 SMART SM00155 189 216 0.15 T 11-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 VSVS12_01231 746e71c7e449f6dea5d88546730ab659 532 Gene3D G3DSA:3.30.870.10 77 278 3.5E-37 T 11-10-2018 VSVS12_01231 746e71c7e449f6dea5d88546730ab659 532 Gene3D G3DSA:3.30.870.10 313 494 2.4E-37 T 11-10-2018 VSVS12_01231 746e71c7e449f6dea5d88546730ab659 532 Pfam PF13091 PLD-like domain 100 248 3.4E-16 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VSVS12_01231 746e71c7e449f6dea5d88546730ab659 532 Pfam PF13091 PLD-like domain 338 471 1.1E-20 T 11-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 VSVS12_01231 746e71c7e449f6dea5d88546730ab659 532 SUPERFAMILY SSF56024 304 486 6.08E-32 T 11-10-2018 VSVS12_01231 746e71c7e449f6dea5d88546730ab659 532 SUPERFAMILY SSF56024 79 258 1.37E-35 T 11-10-2018 VSVS12_00377 3bd22117a6736e38cdf7882559630d6f 424 PIRSF PIRSF500136 1 424 2.3E-140 T 11-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 VSVS12_00377 3bd22117a6736e38cdf7882559630d6f 424 SMART SM00984 330 424 1.2E-13 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VSVS12_00377 3bd22117a6736e38cdf7882559630d6f 424 SUPERFAMILY SSF52413 319 423 2.22E-18 T 11-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 VSVS12_00377 3bd22117a6736e38cdf7882559630d6f 424 Gene3D G3DSA:3.40.50.720 210 424 1.3E-51 T 11-10-2018 VSVS12_00377 3bd22117a6736e38cdf7882559630d6f 424 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 5 193 8.9E-55 T 11-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VSVS12_00377 3bd22117a6736e38cdf7882559630d6f 424 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 331 422 1.7E-13 T 11-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VSVS12_00377 3bd22117a6736e38cdf7882559630d6f 424 SUPERFAMILY SSF48179 211 303 2.04E-27 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VSVS12_00377 3bd22117a6736e38cdf7882559630d6f 424 Gene3D G3DSA:3.40.50.720 2 209 1.7E-60 T 11-10-2018 VSVS12_00377 3bd22117a6736e38cdf7882559630d6f 424 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 211 298 8.3E-26 T 11-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 VSVS12_00377 3bd22117a6736e38cdf7882559630d6f 424 PIRSF PIRSF000124 4 422 5.3E-65 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 VSVS12_00377 3bd22117a6736e38cdf7882559630d6f 424 SUPERFAMILY SSF51735 5 203 9.67E-41 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_00377 3bd22117a6736e38cdf7882559630d6f 424 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 5 411 8.0E-110 T 11-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 VSVS12_02374 501f29d80f236489adb86e4afcb5e640 548 Gene3D G3DSA:3.40.120.10 12 218 4.8E-74 T 11-10-2018 VSVS12_02374 501f29d80f236489adb86e4afcb5e640 548 Gene3D G3DSA:3.40.120.10 221 318 1.0E-44 T 11-10-2018 VSVS12_02374 501f29d80f236489adb86e4afcb5e640 548 SUPERFAMILY SSF55957 432 544 4.84E-21 T 11-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VSVS12_02374 501f29d80f236489adb86e4afcb5e640 548 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 438 1.6E-28 T 11-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VSVS12_02374 501f29d80f236489adb86e4afcb5e640 548 SUPERFAMILY SSF53738 209 317 2.12E-8 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VSVS12_02374 501f29d80f236489adb86e4afcb5e640 548 SUPERFAMILY SSF53738 305 446 8.83E-31 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VSVS12_02374 501f29d80f236489adb86e4afcb5e640 548 SUPERFAMILY SSF53738 27 235 4.47E-52 T 11-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VSVS12_02374 501f29d80f236489adb86e4afcb5e640 548 Gene3D G3DSA:3.30.310.50 443 546 3.5E-36 T 11-10-2018 VSVS12_02374 501f29d80f236489adb86e4afcb5e640 548 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 544 0.0 T 11-10-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-6981|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7900|MetaCyc: PWY-7902 VSVS12_02374 501f29d80f236489adb86e4afcb5e640 548 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 490 537 6.8E-9 T 11-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VSVS12_02374 501f29d80f236489adb86e4afcb5e640 548 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 178 8.0E-40 T 11-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VSVS12_02374 501f29d80f236489adb86e4afcb5e640 548 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 11-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VSVS12_02374 501f29d80f236489adb86e4afcb5e640 548 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 1.2E-17 T 11-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 VSVS12_02374 501f29d80f236489adb86e4afcb5e640 548 Gene3D G3DSA:3.40.120.10 319 442 3.4E-35 T 11-10-2018 VSVS12_00747 8fccf0e9d01c4a0334c52d8f390bb85f 344 Gene3D G3DSA:3.20.20.100 1 344 3.9E-131 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VSVS12_00747 8fccf0e9d01c4a0334c52d8f390bb85f 344 SUPERFAMILY SSF51430 1 343 1.44E-105 T 11-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily VSVS12_00747 8fccf0e9d01c4a0334c52d8f390bb85f 344 Pfam PF00248 Aldo/keto reductase family 15 335 3.7E-72 T 11-10-2018 IPR023210 NADP-dependent oxidoreductase domain VSVS12_01043 3cb31b20acdbbd08635be03b4a240617 180 PIRSF PIRSF028103 1 178 2.5E-56 T 11-10-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 VSVS12_01043 3cb31b20acdbbd08635be03b4a240617 180 Gene3D G3DSA:3.30.70.260 1 85 9.1E-24 T 11-10-2018 VSVS12_01043 3cb31b20acdbbd08635be03b4a240617 180 Gene3D G3DSA:3.30.70.260 87 180 2.7E-37 T 11-10-2018 VSVS12_01043 3cb31b20acdbbd08635be03b4a240617 180 SUPERFAMILY SSF55021 87 176 2.26E-19 T 11-10-2018 VSVS12_01043 3cb31b20acdbbd08635be03b4a240617 180 Pfam PF13740 ACT domain 3 78 2.7E-23 T 11-10-2018 VSVS12_01043 3cb31b20acdbbd08635be03b4a240617 180 SUPERFAMILY SSF55021 1 82 1.25E-16 T 11-10-2018 VSVS12_00917 8c9b6ef29fa79aca3a9018ab0d94846f 105 Gene3D G3DSA:3.30.460.10 1 105 5.8E-35 T 11-10-2018 VSVS12_00917 8c9b6ef29fa79aca3a9018ab0d94846f 105 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 5.7E-25 T 11-10-2018 VSVS12_00917 8c9b6ef29fa79aca3a9018ab0d94846f 105 SUPERFAMILY SSF81301 3 105 2.29E-35 T 11-10-2018 VSVS12_00917 8c9b6ef29fa79aca3a9018ab0d94846f 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 23.667 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS VSVS12_00917 8c9b6ef29fa79aca3a9018ab0d94846f 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 4.4E-36 T 11-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS VSVS12_01141 7fa35d28cb84195449d234fe6f9f3fc9 118 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 14 103 2.2E-30 T 11-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 VSVS12_01141 7fa35d28cb84195449d234fe6f9f3fc9 118 Gene3D G3DSA:1.20.58.280 4 110 4.1E-32 T 11-10-2018 VSVS12_01141 7fa35d28cb84195449d234fe6f9f3fc9 118 PIRSF PIRSF000699 4 113 1.8E-35 T 11-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 VSVS12_01141 7fa35d28cb84195449d234fe6f9f3fc9 118 SUPERFAMILY SSF46973 7 106 3.66E-31 T 11-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 VSVS12_01317 bb031f3ec951ad3deb2800f8a13f3d4f 342 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 200 219 1.7E-73 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VSVS12_01317 bb031f3ec951ad3deb2800f8a13f3d4f 342 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 72 86 1.7E-73 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VSVS12_01317 bb031f3ec951ad3deb2800f8a13f3d4f 342 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 289 315 1.7E-73 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VSVS12_01317 bb031f3ec951ad3deb2800f8a13f3d4f 342 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 119 135 1.7E-73 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VSVS12_01317 bb031f3ec951ad3deb2800f8a13f3d4f 342 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 88 101 1.7E-73 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VSVS12_01317 bb031f3ec951ad3deb2800f8a13f3d4f 342 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 145 159 1.7E-73 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VSVS12_01317 bb031f3ec951ad3deb2800f8a13f3d4f 342 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 244 263 1.7E-73 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VSVS12_01317 bb031f3ec951ad3deb2800f8a13f3d4f 342 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 28 44 1.7E-73 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VSVS12_01317 bb031f3ec951ad3deb2800f8a13f3d4f 342 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 44 65 1.7E-73 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VSVS12_01317 bb031f3ec951ad3deb2800f8a13f3d4f 342 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 163 182 1.7E-73 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VSVS12_01317 bb031f3ec951ad3deb2800f8a13f3d4f 342 Gene3D G3DSA:3.40.190.10 27 311 2.7E-113 T 11-10-2018 VSVS12_01317 bb031f3ec951ad3deb2800f8a13f3d4f 342 Gene3D G3DSA:3.40.190.10 128 316 2.7E-113 T 11-10-2018 VSVS12_01317 bb031f3ec951ad3deb2800f8a13f3d4f 342 SUPERFAMILY SSF53850 23 330 1.78E-88 T 11-10-2018 VSVS12_01317 bb031f3ec951ad3deb2800f8a13f3d4f 342 Pfam PF13416 Bacterial extracellular solute-binding protein 38 297 1.4E-39 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein VSVS12_01317 bb031f3ec951ad3deb2800f8a13f3d4f 342 PIRSF PIRSF019574 2 342 5.6E-120 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VSVS12_01197 dfc7e27bca944edff62dc048aa2b222e 93 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 93 30.557 T 11-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 VSVS12_01197 dfc7e27bca944edff62dc048aa2b222e 93 Pfam PF00216 Bacterial DNA-binding protein 1 91 7.1E-32 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VSVS12_01197 dfc7e27bca944edff62dc048aa2b222e 93 SUPERFAMILY SSF47729 1 91 1.03E-30 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VSVS12_01197 dfc7e27bca944edff62dc048aa2b222e 93 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VSVS12_01197 dfc7e27bca944edff62dc048aa2b222e 93 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 92 9.1E-50 T 11-10-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 VSVS12_01197 dfc7e27bca944edff62dc048aa2b222e 93 SMART SM00411 1 91 9.7E-44 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VSVS12_01197 dfc7e27bca944edff62dc048aa2b222e 93 Gene3D G3DSA:4.10.520.10 40 92 1.2E-29 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VSVS12_01197 dfc7e27bca944edff62dc048aa2b222e 93 Gene3D G3DSA:4.10.520.10 2 39 3.4E-12 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VSVS12_01197 dfc7e27bca944edff62dc048aa2b222e 93 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 6.6E-19 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VSVS12_01197 dfc7e27bca944edff62dc048aa2b222e 93 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 6.6E-19 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VSVS12_01197 dfc7e27bca944edff62dc048aa2b222e 93 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 6.6E-19 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VSVS12_01886 fea7c905b6b0eae9d7e8ea390ea86ac0 420 Pfam PF09375 Imelysin 40 398 1.6E-94 T 11-10-2018 IPR018976 Imelysin-like domain VSVS12_01886 fea7c905b6b0eae9d7e8ea390ea86ac0 420 Gene3D G3DSA:1.20.1420.20 20 403 2.7E-86 T 11-10-2018 IPR038352 Imelysin-like domain superfamily VSVS12_01172 43a8d1e8c8a0eab3b40e450f0088ea6e 453 PIRSF PIRSF006066 1 268 3.5E-90 T 11-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VSVS12_01172 43a8d1e8c8a0eab3b40e450f0088ea6e 453 PIRSF PIRSF006066 270 447 5.1E-49 T 11-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VSVS12_01172 43a8d1e8c8a0eab3b40e450f0088ea6e 453 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 260 2.2E-83 T 11-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VSVS12_01172 43a8d1e8c8a0eab3b40e450f0088ea6e 453 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 437 2.5E-115 T 11-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VSVS12_03579 3d40eca319350118c9579baf9ce33d74 193 Gene3D G3DSA:3.40.50.150 21 190 1.5E-24 T 11-10-2018 VSVS12_03579 3d40eca319350118c9579baf9ce33d74 193 SUPERFAMILY SSF53335 5 193 3.44E-24 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_03579 3d40eca319350118c9579baf9ce33d74 193 Pfam PF13489 Methyltransferase domain 34 150 4.6E-13 T 11-10-2018 VSVS12_03996 e0f1b3d2ec6f47350743bce814fe98bd 208 SUPERFAMILY SSF109604 9 208 1.07E-63 T 11-10-2018 VSVS12_03996 e0f1b3d2ec6f47350743bce814fe98bd 208 Pfam PF01966 HD domain 25 127 4.3E-10 T 11-10-2018 IPR006674 HD domain VSVS12_03996 e0f1b3d2ec6f47350743bce814fe98bd 208 SMART SM00471 20 137 6.1E-8 T 11-10-2018 IPR003607 HD/PDEase domain VSVS12_03996 e0f1b3d2ec6f47350743bce814fe98bd 208 Gene3D G3DSA:1.10.3210.50 3 208 1.1E-69 T 11-10-2018 VSVS12_01401 31e5e1988b6dbd5a3d410e104d4400af 509 Gene3D G3DSA:3.30.450.350 76 301 5.9E-8 T 11-10-2018 VSVS12_01401 31e5e1988b6dbd5a3d410e104d4400af 509 Pfam PF03924 CHASE domain 78 268 1.9E-25 T 11-10-2018 IPR006189 CHASE domain VSVS12_01401 31e5e1988b6dbd5a3d410e104d4400af 509 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 350 508 1.2E-32 T 11-10-2018 IPR000160 GGDEF domain VSVS12_01401 31e5e1988b6dbd5a3d410e104d4400af 509 SMART SM00267 342 508 3.4E-43 T 11-10-2018 IPR000160 GGDEF domain VSVS12_01401 31e5e1988b6dbd5a3d410e104d4400af 509 Pfam PF00990 Diguanylate cyclase, GGDEF domain 354 504 1.1E-34 T 11-10-2018 IPR000160 GGDEF domain VSVS12_01401 31e5e1988b6dbd5a3d410e104d4400af 509 Gene3D G3DSA:3.30.70.270 339 508 2.1E-44 T 11-10-2018 VSVS12_01401 31e5e1988b6dbd5a3d410e104d4400af 509 SUPERFAMILY SSF55073 358 507 1.33E-36 T 11-10-2018 IPR029787 Nucleotide cyclase VSVS12_01401 31e5e1988b6dbd5a3d410e104d4400af 509 SMART SM01079 70 270 5.6E-29 T 11-10-2018 IPR006189 CHASE domain VSVS12_01917 516ab23af83bc63e1a7d7ba3cbdbb4fd 644 Gene3D G3DSA:1.20.120.1080 215 312 3.0E-8 T 11-10-2018 VSVS12_01917 516ab23af83bc63e1a7d7ba3cbdbb4fd 644 Pfam PF04408 Helicase associated domain (HA2) 231 304 1.3E-5 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 VSVS12_01917 516ab23af83bc63e1a7d7ba3cbdbb4fd 644 Pfam PF00271 Helicase conserved C-terminal domain 58 172 7.6E-15 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_01917 516ab23af83bc63e1a7d7ba3cbdbb4fd 644 SUPERFAMILY SSF52540 49 267 3.91E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01917 516ab23af83bc63e1a7d7ba3cbdbb4fd 644 Gene3D G3DSA:3.40.50.300 26 189 2.1E-41 T 11-10-2018 VSVS12_01917 516ab23af83bc63e1a7d7ba3cbdbb4fd 644 SMART SM00490 77 173 6.6E-16 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_01645 d772a0f6f74930a1d02bbdafa57e0648 90 Pfam PF00708 Acylphosphatase 7 87 4.9E-23 T 11-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VSVS12_01645 d772a0f6f74930a1d02bbdafa57e0648 90 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 11-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VSVS12_01645 d772a0f6f74930a1d02bbdafa57e0648 90 SUPERFAMILY SSF54975 4 88 2.4E-26 T 11-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VSVS12_01645 d772a0f6f74930a1d02bbdafa57e0648 90 Gene3D G3DSA:3.30.70.100 1 90 1.6E-27 T 11-10-2018 VSVS12_01645 d772a0f6f74930a1d02bbdafa57e0648 90 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 11-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VSVS12_01645 d772a0f6f74930a1d02bbdafa57e0648 90 PRINTS PR00112 Acylphosphatase signature 26 51 2.3E-5 T 11-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VSVS12_01645 d772a0f6f74930a1d02bbdafa57e0648 90 PRINTS PR00112 Acylphosphatase signature 5 20 2.3E-5 T 11-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 VSVS12_03689 4704fb01ccba749f92b32fb6ae7f5461 420 Pfam PF00072 Response regulator receiver domain 8 117 1.1E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_03689 4704fb01ccba749f92b32fb6ae7f5461 420 Pfam PF14532 Sigma-54 interaction domain 143 287 3.0E-14 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VSVS12_03689 4704fb01ccba749f92b32fb6ae7f5461 420 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 329 338 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VSVS12_03689 4704fb01ccba749f92b32fb6ae7f5461 420 Gene3D G3DSA:1.10.10.60 355 415 5.2E-11 T 11-10-2018 VSVS12_03689 4704fb01ccba749f92b32fb6ae7f5461 420 Gene3D G3DSA:3.40.50.300 142 287 3.5E-21 T 11-10-2018 VSVS12_03689 4704fb01ccba749f92b32fb6ae7f5461 420 Gene3D G3DSA:1.10.8.60 289 354 5.6E-17 T 11-10-2018 VSVS12_03689 4704fb01ccba749f92b32fb6ae7f5461 420 Gene3D G3DSA:3.40.50.2300 3 141 4.0E-34 T 11-10-2018 VSVS12_03689 4704fb01ccba749f92b32fb6ae7f5461 420 SUPERFAMILY SSF46689 359 413 6.45E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_03689 4704fb01ccba749f92b32fb6ae7f5461 420 SUPERFAMILY SSF52540 141 345 3.88E-25 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03689 4704fb01ccba749f92b32fb6ae7f5461 420 SUPERFAMILY SSF52172 5 186 4.84E-37 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_03689 4704fb01ccba749f92b32fb6ae7f5461 420 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 393 413 3.3E-5 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VSVS12_03689 4704fb01ccba749f92b32fb6ae7f5461 420 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 376 393 3.3E-5 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VSVS12_03689 4704fb01ccba749f92b32fb6ae7f5461 420 Pfam PF02954 Bacterial regulatory protein, Fis family 370 410 2.6E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VSVS12_03689 4704fb01ccba749f92b32fb6ae7f5461 420 SMART SM00448 6 117 2.9E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_03965 eb9da6d63f2c85c410678f2ac9553102 665 Pfam PF01136 Peptidase family U32 78 293 4.2E-68 T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 VSVS12_02073 0e4cfb9595663a1c1acd2ddc80db9e86 196 Pfam PF16036 Chalcone isomerase-like 56 193 4.7E-10 T 11-10-2018 IPR016087 Chalcone isomerase GO:0016872 VSVS12_00160 3121fecb56e62b1f698b196e0f48f342 69 Pfam PF02597 ThiS family 8 69 2.2E-13 T 11-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 VSVS12_00160 3121fecb56e62b1f698b196e0f48f342 69 Gene3D G3DSA:3.10.20.30 4 69 6.4E-19 T 11-10-2018 IPR012675 Beta-grasp domain superfamily VSVS12_00160 3121fecb56e62b1f698b196e0f48f342 69 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 6 69 2.1E-16 T 11-10-2018 IPR010035 ThiS, thiamine-biosynthesis VSVS12_00160 3121fecb56e62b1f698b196e0f48f342 69 SUPERFAMILY SSF54285 4 69 2.76E-15 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VSVS12_00781 2cbfb7b3899b320aee85ce324e4c0bfe 349 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 289 315 4.5E-13 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VSVS12_00781 2cbfb7b3899b320aee85ce324e4c0bfe 349 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 244 263 4.5E-13 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VSVS12_00781 2cbfb7b3899b320aee85ce324e4c0bfe 349 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 114 130 4.5E-13 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VSVS12_00781 2cbfb7b3899b320aee85ce324e4c0bfe 349 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 29 45 4.5E-13 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VSVS12_00781 2cbfb7b3899b320aee85ce324e4c0bfe 349 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 159 178 4.5E-13 T 11-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 VSVS12_00781 2cbfb7b3899b320aee85ce324e4c0bfe 349 SUPERFAMILY SSF53850 24 342 1.63E-50 T 11-10-2018 VSVS12_00781 2cbfb7b3899b320aee85ce324e4c0bfe 349 Gene3D G3DSA:3.40.190.10 28 310 1.2E-55 T 11-10-2018 VSVS12_00781 2cbfb7b3899b320aee85ce324e4c0bfe 349 Pfam PF13416 Bacterial extracellular solute-binding protein 39 298 1.2E-21 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein VSVS12_00781 2cbfb7b3899b320aee85ce324e4c0bfe 349 Gene3D G3DSA:3.40.190.10 123 251 1.2E-55 T 11-10-2018 VSVS12_00273 a93819b575b4039564df1fe5655093f8 334 Pfam PF00962 Adenosine/AMP deaminase 5 328 3.8E-88 T 11-10-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 VSVS12_00273 a93819b575b4039564df1fe5655093f8 334 SUPERFAMILY SSF51556 3 326 7.19E-74 T 11-10-2018 IPR032466 Metal-dependent hydrolase VSVS12_00273 a93819b575b4039564df1fe5655093f8 334 Hamap MF_00540 Adenosine deaminase [add]. 1 331 54.123 T 11-10-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 VSVS12_00273 a93819b575b4039564df1fe5655093f8 334 Gene3D G3DSA:3.20.20.140 1 334 6.0E-95 T 11-10-2018 VSVS12_00273 a93819b575b4039564df1fe5655093f8 334 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 327 8.6E-119 T 11-10-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 VSVS12_03804 cbc50366a4bef97625a5374d27a12463 463 Pfam PF01554 MatE 259 409 8.0E-15 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VSVS12_03804 cbc50366a4bef97625a5374d27a12463 463 Pfam PF01554 MatE 20 179 6.1E-30 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VSVS12_03804 cbc50366a4bef97625a5374d27a12463 463 PIRSF PIRSF006603 7 456 1.8E-64 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VSVS12_03804 cbc50366a4bef97625a5374d27a12463 463 TIGRFAM TIGR00797 matE: MATE efflux family protein 20 420 1.3E-50 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VSVS12_04442 6b0d487d2670b3e3d2ac8b745def4d0e 137 TIGRFAM TIGR03751 conj_TIGR03751: conjugative transfer region lipoprotein, TIGR03751 family 16 126 6.3E-35 T 11-10-2018 IPR022262 Lipoprotein, putative VSVS12_04068 bb794187b5224a2e237757b62218427a 257 SUPERFAMILY SSF56112 2 227 2.48E-26 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily VSVS12_04068 bb794187b5224a2e237757b62218427a 257 Gene3D G3DSA:3.90.1200.10 75 242 2.6E-11 T 11-10-2018 VSVS12_04068 bb794187b5224a2e237757b62218427a 257 Pfam PF01636 Phosphotransferase enzyme family 103 163 2.4E-11 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase VSVS12_01938 a792d1b691549ae9fb1d71b672604add 181 Pfam PF01292 Prokaryotic cytochrome b561 14 180 2.6E-28 T 11-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 VSVS12_01938 a792d1b691549ae9fb1d71b672604add 181 SUPERFAMILY SSF81342 13 179 1.8E-32 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 VSVS12_01372 96ac819ddf3ef3d9180e259b6a60b871 644 PIRSF PIRSF000549 1 644 2.1E-284 T 11-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 VSVS12_01372 96ac819ddf3ef3d9180e259b6a60b871 644 Pfam PF08298 PrkA AAA domain 20 380 4.1E-171 T 11-10-2018 IPR013153 PrkA AAA domain VSVS12_01372 96ac819ddf3ef3d9180e259b6a60b871 644 SUPERFAMILY SSF52540 73 368 5.43E-18 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01372 96ac819ddf3ef3d9180e259b6a60b871 644 SMART SM00763 19 380 3.7E-212 T 11-10-2018 IPR013153 PrkA AAA domain VSVS12_01372 96ac819ddf3ef3d9180e259b6a60b871 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 4.9E-73 T 11-10-2018 IPR010650 PrkA C-terminal domain VSVS12_00865 74baf330cc3c78367f9c2f1d0ab029bb 242 Gene3D G3DSA:1.10.287.610 103 150 5.7E-92 T 11-10-2018 VSVS12_00865 74baf330cc3c78367f9c2f1d0ab029bb 242 SUPERFAMILY SSF52313 6 232 1.28E-95 T 11-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily VSVS12_00865 74baf330cc3c78367f9c2f1d0ab029bb 242 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 VSVS12_00865 74baf330cc3c78367f9c2f1d0ab029bb 242 Pfam PF00318 Ribosomal protein S2 9 224 3.8E-94 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00865 74baf330cc3c78367f9c2f1d0ab029bb 242 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 8.8E-107 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00865 74baf330cc3c78367f9c2f1d0ab029bb 242 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.134 T 11-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00865 74baf330cc3c78367f9c2f1d0ab029bb 242 Gene3D G3DSA:3.40.50.10490 8 218 5.7E-92 T 11-10-2018 VSVS12_00865 74baf330cc3c78367f9c2f1d0ab029bb 242 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 11-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 VSVS12_00865 74baf330cc3c78367f9c2f1d0ab029bb 242 PRINTS PR00395 Ribosomal protein S2 signature 158 175 3.2E-37 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00865 74baf330cc3c78367f9c2f1d0ab029bb 242 PRINTS PR00395 Ribosomal protein S2 signature 196 210 3.2E-37 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00865 74baf330cc3c78367f9c2f1d0ab029bb 242 PRINTS PR00395 Ribosomal protein S2 signature 37 46 3.2E-37 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00865 74baf330cc3c78367f9c2f1d0ab029bb 242 PRINTS PR00395 Ribosomal protein S2 signature 87 104 3.2E-37 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00865 74baf330cc3c78367f9c2f1d0ab029bb 242 PRINTS PR00395 Ribosomal protein S2 signature 175 186 3.2E-37 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00865 74baf330cc3c78367f9c2f1d0ab029bb 242 PRINTS PR00395 Ribosomal protein S2 signature 6 24 3.2E-37 T 11-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_03653 df79e54fd530461a6a49403573c2f989 397 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 11-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 VSVS12_03653 df79e54fd530461a6a49403573c2f989 397 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 395 53.167 T 11-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 VSVS12_03653 df79e54fd530461a6a49403573c2f989 397 Gene3D G3DSA:3.40.640.10 58 296 9.4E-133 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VSVS12_03653 df79e54fd530461a6a49403573c2f989 397 Gene3D G3DSA:3.90.1150.10 40 387 9.4E-133 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VSVS12_03653 df79e54fd530461a6a49403573c2f989 397 SUPERFAMILY SSF53383 4 395 5.24E-119 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VSVS12_03653 df79e54fd530461a6a49403573c2f989 397 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 5 397 2.8E-206 T 11-10-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 VSVS12_03653 df79e54fd530461a6a49403573c2f989 397 Pfam PF00155 Aminotransferase class I and II 43 386 1.8E-72 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VSVS12_02140 65bb0028800b0f86a3bd6d80a0d16edd 171 Pfam PF00691 OmpA family 70 165 2.0E-21 T 11-10-2018 IPR006665 OmpA-like domain VSVS12_02140 65bb0028800b0f86a3bd6d80a0d16edd 171 Gene3D G3DSA:3.30.1330.60 43 171 9.1E-40 T 11-10-2018 IPR036737 OmpA-like domain superfamily VSVS12_02140 65bb0028800b0f86a3bd6d80a0d16edd 171 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 68 171 4.7E-44 T 11-10-2018 IPR014169 Peptidoglycan-associated lipoprotein, C-terminal GO:0009279 VSVS12_02140 65bb0028800b0f86a3bd6d80a0d16edd 171 Hamap MF_02204 Peptidoglycan-associated lipoprotein [pal]. 5 171 30.552 T 11-10-2018 IPR039001 Peptidoglycan-associated lipoprotein GO:0009279|GO:0051301 VSVS12_02140 65bb0028800b0f86a3bd6d80a0d16edd 171 ProSitePatterns PS01068 OmpA-like domain. 103 147 - T 11-10-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 VSVS12_02140 65bb0028800b0f86a3bd6d80a0d16edd 171 PRINTS PR01021 OMPA domain signature 71 93 4.0E-15 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VSVS12_02140 65bb0028800b0f86a3bd6d80a0d16edd 171 PRINTS PR01021 OMPA domain signature 116 132 4.0E-15 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VSVS12_02140 65bb0028800b0f86a3bd6d80a0d16edd 171 PRINTS PR01021 OMPA domain signature 101 116 4.0E-15 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VSVS12_02140 65bb0028800b0f86a3bd6d80a0d16edd 171 SUPERFAMILY SSF103088 63 171 2.62E-33 T 11-10-2018 IPR036737 OmpA-like domain superfamily VSVS12_00391 2293c1f74ae4100c560f10050094b769 388 SUPERFAMILY SSF53756 2 363 3.82E-27 T 11-10-2018 VSVS12_00391 2293c1f74ae4100c560f10050094b769 388 Gene3D G3DSA:3.40.50.2000 207 369 3.7E-14 T 11-10-2018 VSVS12_00391 2293c1f74ae4100c560f10050094b769 388 Pfam PF13579 Glycosyl transferase 4-like domain 20 183 4.1E-7 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 VSVS12_00391 2293c1f74ae4100c560f10050094b769 388 Gene3D G3DSA:3.40.50.2000 1 206 1.3E-12 T 11-10-2018 VSVS12_00391 2293c1f74ae4100c560f10050094b769 388 Pfam PF00534 Glycosyl transferases group 1 211 365 1.1E-11 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 VSVS12_00813 f03be4116a9dea792bd4ed49f5b123a7 64 SUPERFAMILY SSF140319 1 62 9.55E-28 T 11-10-2018 IPR036762 IscX-like superfamily VSVS12_00813 f03be4116a9dea792bd4ed49f5b123a7 64 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 2 64 2.0E-34 T 11-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VSVS12_00813 f03be4116a9dea792bd4ed49f5b123a7 64 Pfam PF04384 Iron-sulphur cluster assembly 1 63 3.1E-33 T 11-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VSVS12_00813 f03be4116a9dea792bd4ed49f5b123a7 64 Gene3D G3DSA:1.10.10.600 1 64 5.2E-29 T 11-10-2018 IPR036762 IscX-like superfamily VSVS12_00813 f03be4116a9dea792bd4ed49f5b123a7 64 PIRSF PIRSF039003 1 64 2.6E-33 T 11-10-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 VSVS12_01438 c871f7b8c4ac5b51e6084ddeb6ed6dc9 290 Gene3D G3DSA:3.40.50.1820 34 288 1.3E-48 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold VSVS12_01438 c871f7b8c4ac5b51e6084ddeb6ed6dc9 290 SUPERFAMILY SSF53474 35 287 3.06E-47 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold VSVS12_01438 c871f7b8c4ac5b51e6084ddeb6ed6dc9 290 Pfam PF12697 Alpha/beta hydrolase family 53 279 3.2E-20 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VSVS12_02825 66ec0823030d42e85bc3f57c59d28783 584 SMART SM00563 75 199 6.1E-7 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VSVS12_02825 66ec0823030d42e85bc3f57c59d28783 584 SUPERFAMILY SSF55729 313 453 5.19E-25 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_02825 66ec0823030d42e85bc3f57c59d28783 584 Pfam PF13444 Acetyltransferase (GNAT) domain 330 431 4.6E-24 T 11-10-2018 VSVS12_02825 66ec0823030d42e85bc3f57c59d28783 584 SUPERFAMILY SSF69593 49 158 3.01E-7 T 11-10-2018 VSVS12_02825 66ec0823030d42e85bc3f57c59d28783 584 Gene3D G3DSA:3.40.630.30 312 463 4.3E-8 T 11-10-2018 VSVS12_04026 1ec10884517199c1cfd8c35a42a7172a 480 Pfam PF13250 Domain of unknown function (DUF4041) 201 256 1.1E-15 T 11-10-2018 IPR025280 Domain of unknown function DUF4041 VSVS12_04026 1ec10884517199c1cfd8c35a42a7172a 480 Pfam PF13455 Meiotically up-regulated gene 113 377 454 1.6E-14 T 11-10-2018 VSVS12_04026 1ec10884517199c1cfd8c35a42a7172a 480 SMART SM00974 371 454 5.3E-32 T 11-10-2018 IPR018306 Bacteriophage T5, Orf172 DNA-binding VSVS12_03636 3d5fa3abc9268418a6139358f931c2f7 246 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 7 235 2.4E-38 T 11-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 VSVS12_03636 3d5fa3abc9268418a6139358f931c2f7 246 Gene3D G3DSA:3.20.20.190 1 243 7.3E-71 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VSVS12_03636 3d5fa3abc9268418a6139358f931c2f7 246 SUPERFAMILY SSF51695 3 238 3.4E-64 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VSVS12_02037 564d7b3f9502364caa530aa3f9a6977c 538 SMART SM00283 275 536 7.0E-68 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_02037 564d7b3f9502364caa530aa3f9a6977c 538 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 323 503 5.3E-45 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_02037 564d7b3f9502364caa530aa3f9a6977c 538 Pfam PF00672 HAMP domain 208 256 1.2E-11 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_02037 564d7b3f9502364caa530aa3f9a6977c 538 SUPERFAMILY SSF58104 233 537 2.35E-70 T 11-10-2018 VSVS12_02037 564d7b3f9502364caa530aa3f9a6977c 538 Gene3D G3DSA:1.10.287.950 206 538 3.3E-71 T 11-10-2018 VSVS12_02037 564d7b3f9502364caa530aa3f9a6977c 538 SMART SM00304 207 260 1.8E-11 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_03774 3328df2c0e19db1de705ce973b6d5310 632 Gene3D G3DSA:3.30.450.40 8 161 1.2E-11 T 11-10-2018 IPR029016 GAF-like domain superfamily VSVS12_03774 3328df2c0e19db1de705ce973b6d5310 632 Pfam PF00990 Diguanylate cyclase, GGDEF domain 204 358 5.1E-11 T 11-10-2018 IPR000160 GGDEF domain VSVS12_03774 3328df2c0e19db1de705ce973b6d5310 632 SUPERFAMILY SSF55073 209 360 7.85E-11 T 11-10-2018 IPR029787 Nucleotide cyclase VSVS12_03774 3328df2c0e19db1de705ce973b6d5310 632 Gene3D G3DSA:3.30.70.270 197 375 2.2E-13 T 11-10-2018 VSVS12_03774 3328df2c0e19db1de705ce973b6d5310 632 Pfam PF00563 EAL domain 381 613 7.0E-68 T 11-10-2018 IPR001633 EAL domain VSVS12_03774 3328df2c0e19db1de705ce973b6d5310 632 Gene3D G3DSA:3.20.20.450 376 626 1.0E-84 T 11-10-2018 IPR035919 EAL domain superfamily VSVS12_03774 3328df2c0e19db1de705ce973b6d5310 632 SMART SM00267 192 363 6.1E-5 T 11-10-2018 IPR000160 GGDEF domain VSVS12_03774 3328df2c0e19db1de705ce973b6d5310 632 SMART SM00065 14 161 3.3E-4 T 11-10-2018 IPR003018 GAF domain GO:0005515 VSVS12_03774 3328df2c0e19db1de705ce973b6d5310 632 SUPERFAMILY SSF55781 17 160 2.72E-17 T 11-10-2018 VSVS12_03774 3328df2c0e19db1de705ce973b6d5310 632 SUPERFAMILY SSF141868 378 626 1.44E-79 T 11-10-2018 IPR035919 EAL domain superfamily VSVS12_03774 3328df2c0e19db1de705ce973b6d5310 632 SMART SM00052 373 618 3.2E-95 T 11-10-2018 IPR001633 EAL domain VSVS12_00644 d0d96adec42d8030748720e299d114fa 790 Pfam PF03968 OstA-like protein 58 190 9.3E-19 T 11-10-2018 IPR005653 Organic solvent tolerance-like, N-terminal VSVS12_00644 d0d96adec42d8030748720e299d114fa 790 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 3 762 19.593 T 11-10-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 VSVS12_00644 d0d96adec42d8030748720e299d114fa 790 Gene3D G3DSA:2.60.450.10 52 157 7.2E-9 T 11-10-2018 VSVS12_00644 d0d96adec42d8030748720e299d114fa 790 Pfam PF04453 Organic solvent tolerance protein 298 689 4.7E-115 T 11-10-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 VSVS12_01632 f196b367c2d73c21cc2dd275b6ba04fe 181 Pfam PF00583 Acetyltransferase (GNAT) family 56 169 1.5E-15 T 11-10-2018 IPR000182 GNAT domain VSVS12_01632 f196b367c2d73c21cc2dd275b6ba04fe 181 SUPERFAMILY SSF55729 27 170 5.48E-27 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_01632 f196b367c2d73c21cc2dd275b6ba04fe 181 Gene3D G3DSA:3.40.630.30 26 160 1.6E-32 T 11-10-2018 VSVS12_01483 196c15fb49fd477b6034efdba396b7d1 1020 Gene3D G3DSA:3.30.70.1430 556 654 3.3E-243 T 11-10-2018 VSVS12_01483 196c15fb49fd477b6034efdba396b7d1 1020 SUPERFAMILY SSF82866 793 1012 4.32E-45 T 11-10-2018 VSVS12_01483 196c15fb49fd477b6034efdba396b7d1 1020 Gene3D G3DSA:3.30.2090.10 706 796 3.3E-243 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VSVS12_01483 196c15fb49fd477b6034efdba396b7d1 1020 SUPERFAMILY SSF82866 294 493 3.66E-30 T 11-10-2018 VSVS12_01483 196c15fb49fd477b6034efdba396b7d1 1020 SUPERFAMILY SSF82714 187 269 2.88E-12 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VSVS12_01483 196c15fb49fd477b6034efdba396b7d1 1020 PRINTS PR00702 Acriflavin resistance protein family signature 388 412 8.2E-22 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_01483 196c15fb49fd477b6034efdba396b7d1 1020 PRINTS PR00702 Acriflavin resistance protein family signature 466 489 8.2E-22 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_01483 196c15fb49fd477b6034efdba396b7d1 1020 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 8.2E-22 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_01483 196c15fb49fd477b6034efdba396b7d1 1020 PRINTS PR00702 Acriflavin resistance protein family signature 441 464 8.2E-22 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_01483 196c15fb49fd477b6034efdba396b7d1 1020 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 8.2E-22 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_01483 196c15fb49fd477b6034efdba396b7d1 1020 SUPERFAMILY SSF82693 40 137 1.05E-19 T 11-10-2018 VSVS12_01483 196c15fb49fd477b6034efdba396b7d1 1020 SUPERFAMILY SSF82714 716 789 1.96E-10 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VSVS12_01483 196c15fb49fd477b6034efdba396b7d1 1020 Gene3D G3DSA:1.20.1640.10 10 508 3.3E-243 T 11-10-2018 VSVS12_01483 196c15fb49fd477b6034efdba396b7d1 1020 Gene3D G3DSA:3.30.70.1440 655 854 3.3E-243 T 11-10-2018 VSVS12_01483 196c15fb49fd477b6034efdba396b7d1 1020 Gene3D G3DSA:1.20.1640.10 509 1006 3.3E-243 T 11-10-2018 VSVS12_01483 196c15fb49fd477b6034efdba396b7d1 1020 SUPERFAMILY SSF82693 138 328 7.06E-15 T 11-10-2018 VSVS12_01483 196c15fb49fd477b6034efdba396b7d1 1020 Pfam PF00873 AcrB/AcrD/AcrF family 3 1009 1.4E-161 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_01483 196c15fb49fd477b6034efdba396b7d1 1020 Gene3D G3DSA:3.30.2090.10 181 272 3.3E-243 T 11-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains VSVS12_01483 196c15fb49fd477b6034efdba396b7d1 1020 Gene3D G3DSA:3.30.70.1430 40 804 3.3E-243 T 11-10-2018 VSVS12_01483 196c15fb49fd477b6034efdba396b7d1 1020 Gene3D G3DSA:3.30.70.1320 138 330 3.3E-243 T 11-10-2018 VSVS12_02561 80cf2275c55d4b0f4c35aad54e569df0 353 Gene3D G3DSA:3.40.50.2000 161 318 1.6E-121 T 11-10-2018 VSVS12_02561 80cf2275c55d4b0f4c35aad54e569df0 353 Gene3D G3DSA:3.40.50.2000 8 160 1.6E-121 T 11-10-2018 VSVS12_02561 80cf2275c55d4b0f4c35aad54e569df0 353 SUPERFAMILY SSF53756 5 352 5.65E-125 T 11-10-2018 VSVS12_02561 80cf2275c55d4b0f4c35aad54e569df0 353 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 7 352 34.661 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VSVS12_02561 80cf2275c55d4b0f4c35aad54e569df0 353 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 8 144 1.2E-47 T 11-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VSVS12_02561 80cf2275c55d4b0f4c35aad54e569df0 353 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 348 8.8E-119 T 11-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VSVS12_02561 80cf2275c55d4b0f4c35aad54e569df0 353 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 184 337 8.0E-34 T 11-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 VSVS12_02547 199c614479e6373f952c77b07db360bc 486 Gene3D G3DSA:2.60.40.2550 317 414 4.0E-35 T 11-10-2018 VSVS12_02547 199c614479e6373f952c77b07db360bc 486 Hamap MF_01905 GlcNAc-binding protein A [gbpA]. 3 485 55.582 T 11-10-2018 IPR020879 N-acetylglucosamine-binding protein A GO:0008061 VSVS12_02547 199c614479e6373f952c77b07db360bc 486 Gene3D G3DSA:3.30.70.2150 209 316 1.5E-37 T 11-10-2018 VSVS12_02547 199c614479e6373f952c77b07db360bc 486 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 24 199 1.8E-34 T 11-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal VSVS12_02547 199c614479e6373f952c77b07db360bc 486 SUPERFAMILY SSF81296 24 203 7.28E-55 T 11-10-2018 IPR014756 Immunoglobulin E-set VSVS12_02547 199c614479e6373f952c77b07db360bc 486 Gene3D G3DSA:2.70.50.50 24 202 2.7E-81 T 11-10-2018 VSVS12_02088 8287719c477d5f8a1d7987566f7eed56 329 Gene3D G3DSA:2.40.160.10 20 329 2.3E-28 T 11-10-2018 IPR023614 Porin domain superfamily VSVS12_02088 8287719c477d5f8a1d7987566f7eed56 329 SUPERFAMILY SSF56935 30 329 1.1E-29 T 11-10-2018 VSVS12_02088 8287719c477d5f8a1d7987566f7eed56 329 Pfam PF13609 Gram-negative porin 7 302 5.6E-29 T 11-10-2018 VSVS12_01840 a62971c6dfc2af7b0f3819c5026c4970 461 TIGRFAM TIGR00835 agcS: amino acid carrier protein 2 424 4.4E-150 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VSVS12_01840 a62971c6dfc2af7b0f3819c5026c4970 461 PRINTS PR00175 Sodium/alanine symporter signature 189 208 1.6E-55 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VSVS12_01840 a62971c6dfc2af7b0f3819c5026c4970 461 PRINTS PR00175 Sodium/alanine symporter signature 70 92 1.6E-55 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VSVS12_01840 a62971c6dfc2af7b0f3819c5026c4970 461 PRINTS PR00175 Sodium/alanine symporter signature 286 304 1.6E-55 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VSVS12_01840 a62971c6dfc2af7b0f3819c5026c4970 461 PRINTS PR00175 Sodium/alanine symporter signature 332 354 1.6E-55 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VSVS12_01840 a62971c6dfc2af7b0f3819c5026c4970 461 PRINTS PR00175 Sodium/alanine symporter signature 161 179 1.6E-55 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VSVS12_01840 a62971c6dfc2af7b0f3819c5026c4970 461 PRINTS PR00175 Sodium/alanine symporter signature 393 413 1.6E-55 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VSVS12_01840 a62971c6dfc2af7b0f3819c5026c4970 461 Pfam PF01235 Sodium:alanine symporter family 35 436 6.6E-154 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VSVS12_01840 a62971c6dfc2af7b0f3819c5026c4970 461 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 70 85 - T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VSVS12_04516 f4d49712aaafd2d15dfc9a2e534dcf7f 301 Gene3D G3DSA:1.10.3720.10 25 287 2.6E-47 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_04516 f4d49712aaafd2d15dfc9a2e534dcf7f 301 SUPERFAMILY SSF161098 31 293 1.4E-54 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_04516 f4d49712aaafd2d15dfc9a2e534dcf7f 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 284 3.9E-13 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VSVS12_04390 f4d49712aaafd2d15dfc9a2e534dcf7f 301 Gene3D G3DSA:1.10.3720.10 25 287 2.6E-47 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_04390 f4d49712aaafd2d15dfc9a2e534dcf7f 301 SUPERFAMILY SSF161098 31 293 1.4E-54 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_04390 f4d49712aaafd2d15dfc9a2e534dcf7f 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 284 3.9E-13 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VSVS12_01753 d68f23f8bfd449c795ffe74262d95dee 293 SUPERFAMILY SSF102114 23 242 4.45E-35 T 11-10-2018 VSVS12_01753 d68f23f8bfd449c795ffe74262d95dee 293 SMART SM00729 15 235 1.8E-26 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VSVS12_01753 d68f23f8bfd449c795ffe74262d95dee 293 Pfam PF04055 Radical SAM superfamily 22 178 4.8E-16 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VSVS12_01753 d68f23f8bfd449c795ffe74262d95dee 293 Gene3D G3DSA:3.20.20.70 16 245 3.8E-17 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_02003 32081da9c4d25d04f6508915a2baa884 501 SMART SM00267 301 484 1.7E-36 T 11-10-2018 IPR000160 GGDEF domain VSVS12_02003 32081da9c4d25d04f6508915a2baa884 501 Gene3D G3DSA:1.20.1480.50 219 311 1.7E-8 T 11-10-2018 VSVS12_02003 32081da9c4d25d04f6508915a2baa884 501 Pfam PF00990 Diguanylate cyclase, GGDEF domain 314 480 2.8E-34 T 11-10-2018 IPR000160 GGDEF domain VSVS12_02003 32081da9c4d25d04f6508915a2baa884 501 SUPERFAMILY SSF55073 317 483 3.22E-35 T 11-10-2018 IPR029787 Nucleotide cyclase VSVS12_02003 32081da9c4d25d04f6508915a2baa884 501 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 311 482 2.1E-34 T 11-10-2018 IPR000160 GGDEF domain VSVS12_02003 32081da9c4d25d04f6508915a2baa884 501 Gene3D G3DSA:3.30.70.270 314 488 2.0E-39 T 11-10-2018 VSVS12_01299 806d7b6a4f370c717e1cf02ff686c67f 152 Gene3D G3DSA:1.10.10.10 4 55 2.9E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_01299 806d7b6a4f370c717e1cf02ff686c67f 152 Gene3D G3DSA:3.30.70.920 56 140 6.3E-24 T 11-10-2018 VSVS12_01299 806d7b6a4f370c717e1cf02ff686c67f 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 2.5E-12 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VSVS12_01299 806d7b6a4f370c717e1cf02ff686c67f 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 2.5E-12 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VSVS12_01299 806d7b6a4f370c717e1cf02ff686c67f 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 2.5E-12 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VSVS12_01299 806d7b6a4f370c717e1cf02ff686c67f 152 Pfam PF01037 Lrp/AsnC ligand binding domain 69 142 1.4E-22 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VSVS12_01299 806d7b6a4f370c717e1cf02ff686c67f 152 SUPERFAMILY SSF54909 63 152 2.68E-21 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel VSVS12_01299 806d7b6a4f370c717e1cf02ff686c67f 152 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 6.5E-18 T 11-10-2018 VSVS12_01299 806d7b6a4f370c717e1cf02ff686c67f 152 SMART SM00344 3 112 2.1E-46 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VSVS12_01299 806d7b6a4f370c717e1cf02ff686c67f 152 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 11-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VSVS12_01299 806d7b6a4f370c717e1cf02ff686c67f 152 SUPERFAMILY SSF46785 2 61 2.11E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_00888 cac20742ff561251a3a8f76d18ed59bc 248 Gene3D G3DSA:3.40.50.150 58 184 6.1E-14 T 11-10-2018 VSVS12_00888 cac20742ff561251a3a8f76d18ed59bc 248 Pfam PF08241 Methyltransferase domain 62 125 5.8E-10 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 VSVS12_00888 cac20742ff561251a3a8f76d18ed59bc 248 SUPERFAMILY SSF53335 73 212 2.31E-20 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_03145 351622fc872a4190365d06c092352330 321 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 29 308 3.8E-92 T 11-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VSVS12_03145 351622fc872a4190365d06c092352330 321 Gene3D G3DSA:3.40.190.170 23 321 6.1E-116 T 11-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VSVS12_03145 351622fc872a4190365d06c092352330 321 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 34 283 8.1E-77 T 11-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 VSVS12_03145 351622fc872a4190365d06c092352330 321 PIRSF PIRSF006470 1 321 1.2E-76 T 11-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 VSVS12_01683 d0d64ea769dd5b5ed88955df9a698551 206 TIGRFAM TIGR00781 ccoO: cytochrome c oxidase, cbb3-type, subunit II 9 186 3.7E-80 T 11-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO VSVS12_01683 d0d64ea769dd5b5ed88955df9a698551 206 SUPERFAMILY SSF46626 21 202 2.98E-27 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VSVS12_01683 d0d64ea769dd5b5ed88955df9a698551 206 Gene3D G3DSA:1.10.760.10 46 206 2.3E-71 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VSVS12_01683 d0d64ea769dd5b5ed88955df9a698551 206 Pfam PF02433 Cytochrome C oxidase, mono-heme subunit/FixO 9 186 4.4E-81 T 11-10-2018 IPR003468 Cytochrome c oxidase, monohaem subunit/FixO VSVS12_02766 4507e72bedc98b788084e8f1daea608f 202 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 193 27.451 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 VSVS12_02766 4507e72bedc98b788084e8f1daea608f 202 SUPERFAMILY SSF52540 1 193 3.89E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02766 4507e72bedc98b788084e8f1daea608f 202 Gene3D G3DSA:3.40.50.300 1 202 6.0E-66 T 11-10-2018 VSVS12_02766 4507e72bedc98b788084e8f1daea608f 202 Pfam PF01121 Dephospho-CoA kinase 4 181 9.4E-70 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 VSVS12_02766 4507e72bedc98b788084e8f1daea608f 202 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 188 1.1E-62 T 11-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 VSVS12_02496 4f56fd796224192d70bbfd73b5329826 202 Gene3D G3DSA:3.40.30.10 1 197 5.1E-71 T 11-10-2018 VSVS12_02496 4f56fd796224192d70bbfd73b5329826 202 Pfam PF00578 AhpC/TSA family 4 139 4.8E-33 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VSVS12_02496 4f56fd796224192d70bbfd73b5329826 202 SUPERFAMILY SSF52833 1 194 1.29E-65 T 11-10-2018 IPR036249 Thioredoxin-like superfamily VSVS12_02496 4f56fd796224192d70bbfd73b5329826 202 PIRSF PIRSF000239 1 200 6.8E-58 T 11-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VSVS12_02496 4f56fd796224192d70bbfd73b5329826 202 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 193 3.0E-8 T 11-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VSVS12_03423 82d5425097a0356cbf004d28c9a9e0cc 304 ProSitePatterns PS01245 RIO1/ZK632.3/MJ0444 family signature. 173 184 - T 11-10-2018 IPR018935 RIO kinase, conserved site GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1|Reactome: R-HSA-6791226 VSVS12_03423 82d5425097a0356cbf004d28c9a9e0cc 304 SUPERFAMILY SSF56112 27 232 3.72E-20 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily VSVS12_03423 82d5425097a0356cbf004d28c9a9e0cc 304 SMART SM00090 1 243 2.6E-15 T 11-10-2018 IPR000687 RIO kinase GO:0004674|GO:0005524 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1|Reactome: R-HSA-6791226 VSVS12_03423 82d5425097a0356cbf004d28c9a9e0cc 304 Pfam PF01163 RIO1 family 40 230 1.7E-41 T 11-10-2018 VSVS12_03423 82d5425097a0356cbf004d28c9a9e0cc 304 Gene3D G3DSA:1.10.510.10 145 239 1.9E-20 T 11-10-2018 VSVS12_01357 fd143cd8bf21a9677b97da3cbdc45b13 179 Gene3D G3DSA:3.40.630.30 1 178 3.3E-40 T 11-10-2018 VSVS12_01357 fd143cd8bf21a9677b97da3cbdc45b13 179 Pfam PF13302 Acetyltransferase (GNAT) domain 13 153 1.3E-20 T 11-10-2018 IPR000182 GNAT domain VSVS12_01357 fd143cd8bf21a9677b97da3cbdc45b13 179 SUPERFAMILY SSF55729 3 177 1.64E-38 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_00163 d8366d5cd70a2cf36aa346fac92a2110 645 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 143 596 99.787 T 11-10-2018 IPR037509 Phosphomethylpyrimidine synthase GO:0009228|GO:0016830 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 VSVS12_00163 d8366d5cd70a2cf36aa346fac92a2110 645 Pfam PF13667 ThiC-associated domain 22 103 2.9E-33 T 11-10-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 VSVS12_00163 d8366d5cd70a2cf36aa346fac92a2110 645 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 143 594 4.3E-220 T 11-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 VSVS12_00163 d8366d5cd70a2cf36aa346fac92a2110 645 Gene3D G3DSA:3.20.20.540 214 527 3.1E-154 T 11-10-2018 IPR038521 ThiC/Bza superfamily KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 VSVS12_00163 d8366d5cd70a2cf36aa346fac92a2110 645 Pfam PF01964 Radical SAM ThiC family 144 592 2.8E-199 T 11-10-2018 IPR002817 Phosphomethylpyrimidine synthase ThiC/5-hydroxybenzimidazole synthase BzaA/B GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 VSVS12_04266 0cfecc4f135390cba4cfdbb847f51fe2 439 PIRSF PIRSF006603 1 437 9.6E-85 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VSVS12_04266 0cfecc4f135390cba4cfdbb847f51fe2 439 TIGRFAM TIGR00797 matE: MATE efflux family protein 16 400 2.7E-49 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VSVS12_04266 0cfecc4f135390cba4cfdbb847f51fe2 439 Pfam PF01554 MatE 16 176 1.4E-18 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VSVS12_04266 0cfecc4f135390cba4cfdbb847f51fe2 439 Pfam PF01554 MatE 235 392 1.3E-16 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VSVS12_00763 981002bd376a86ce1908e19e1c27ee6a 143 SUPERFAMILY SSF54534 6 142 2.36E-36 T 11-10-2018 VSVS12_00763 981002bd376a86ce1908e19e1c27ee6a 143 Gene3D G3DSA:2.40.10.330 72 128 3.1E-41 T 11-10-2018 VSVS12_00763 981002bd376a86ce1908e19e1c27ee6a 143 Gene3D G3DSA:3.10.50.40 13 140 3.1E-41 T 11-10-2018 VSVS12_00763 981002bd376a86ce1908e19e1c27ee6a 143 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 139 5.5E-13 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VSVS12_01704 2101b59697810f0687413a9abe3e4837 351 Pfam PF01292 Prokaryotic cytochrome b561 124 305 1.3E-25 T 11-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 VSVS12_01704 2101b59697810f0687413a9abe3e4837 351 SUPERFAMILY SSF81342 118 330 1.65E-45 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 VSVS12_01704 2101b59697810f0687413a9abe3e4837 351 Gene3D G3DSA:1.20.950.20 116 335 3.0E-63 T 11-10-2018 VSVS12_01704 2101b59697810f0687413a9abe3e4837 351 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 121 325 3.0E-81 T 11-10-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 VSVS12_01304 27ccd4091c5f73ce0ea21a8db39ae0aa 679 SMART SM00062 32 233 3.6E-4 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VSVS12_01304 27ccd4091c5f73ce0ea21a8db39ae0aa 679 SMART SM00062 254 478 5.6E-4 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VSVS12_01304 27ccd4091c5f73ce0ea21a8db39ae0aa 679 SUPERFAMILY SSF55073 520 657 1.57E-25 T 11-10-2018 IPR029787 Nucleotide cyclase VSVS12_01304 27ccd4091c5f73ce0ea21a8db39ae0aa 679 Pfam PF00990 Diguanylate cyclase, GGDEF domain 516 658 7.3E-26 T 11-10-2018 IPR000160 GGDEF domain VSVS12_01304 27ccd4091c5f73ce0ea21a8db39ae0aa 679 SUPERFAMILY SSF53850 266 470 1.36E-25 T 11-10-2018 VSVS12_01304 27ccd4091c5f73ce0ea21a8db39ae0aa 679 SMART SM00267 504 663 3.5E-20 T 11-10-2018 IPR000160 GGDEF domain VSVS12_01304 27ccd4091c5f73ce0ea21a8db39ae0aa 679 Gene3D G3DSA:3.40.190.10 263 469 4.8E-25 T 11-10-2018 VSVS12_01304 27ccd4091c5f73ce0ea21a8db39ae0aa 679 Gene3D G3DSA:3.40.190.10 120 181 1.3E-6 T 11-10-2018 VSVS12_01304 27ccd4091c5f73ce0ea21a8db39ae0aa 679 Gene3D G3DSA:3.40.190.10 339 439 4.8E-25 T 11-10-2018 VSVS12_01304 27ccd4091c5f73ce0ea21a8db39ae0aa 679 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 265 462 2.0E-21 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VSVS12_01304 27ccd4091c5f73ce0ea21a8db39ae0aa 679 SUPERFAMILY SSF53850 47 223 2.9E-21 T 11-10-2018 VSVS12_01304 27ccd4091c5f73ce0ea21a8db39ae0aa 679 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 47 175 1.7E-17 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VSVS12_01304 27ccd4091c5f73ce0ea21a8db39ae0aa 679 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 511 660 7.9E-27 T 11-10-2018 IPR000160 GGDEF domain VSVS12_01304 27ccd4091c5f73ce0ea21a8db39ae0aa 679 Gene3D G3DSA:3.40.190.10 30 119 1.3E-9 T 11-10-2018 VSVS12_01304 27ccd4091c5f73ce0ea21a8db39ae0aa 679 Gene3D G3DSA:3.30.70.270 510 677 3.4E-31 T 11-10-2018 VSVS12_02439 5f4a9e9f252cd0004d2388309375bca9 198 ProSitePatterns PS01114 GPR1/FUN34/yaaH family signature. 7 16 - T 11-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 VSVS12_02439 5f4a9e9f252cd0004d2388309375bca9 198 Pfam PF01184 GPR1/FUN34/yaaH family 3 182 2.1E-36 T 11-10-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 VSVS12_04588 c023235298b23dfac515f142b7fc3d30 85 SUPERFAMILY SSF46785 16 74 6.8E-8 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_04588 c023235298b23dfac515f142b7fc3d30 85 Pfam PF01051 Initiator Replication protein 3 68 2.9E-13 T 11-10-2018 IPR000525 Initiator Rep protein GO:0003887|GO:0005727|GO:0006270 VSVS12_03680 64c7b083b884b8c91691aa73f1f0b6ce 527 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 268 284 5.3E-49 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VSVS12_03680 64c7b083b884b8c91691aa73f1f0b6ce 527 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 198 226 5.3E-49 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VSVS12_03680 64c7b083b884b8c91691aa73f1f0b6ce 527 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 174 187 5.3E-49 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VSVS12_03680 64c7b083b884b8c91691aa73f1f0b6ce 527 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 359 385 5.3E-49 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VSVS12_03680 64c7b083b884b8c91691aa73f1f0b6ce 527 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 250 267 5.3E-49 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VSVS12_03680 64c7b083b884b8c91691aa73f1f0b6ce 527 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 37 218 4.1E-64 T 11-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VSVS12_03680 64c7b083b884b8c91691aa73f1f0b6ce 527 PIRSF PIRSF000110 19 516 5.3E-178 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VSVS12_03680 64c7b083b884b8c91691aa73f1f0b6ce 527 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 33 513 2.3E-203 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VSVS12_03680 64c7b083b884b8c91691aa73f1f0b6ce 527 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 220 513 1.2E-115 T 11-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VSVS12_03680 64c7b083b884b8c91691aa73f1f0b6ce 527 SUPERFAMILY SSF51735 27 221 6.56E-62 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_03680 64c7b083b884b8c91691aa73f1f0b6ce 527 Gene3D G3DSA:3.40.50.720 31 206 6.1E-60 T 11-10-2018 VSVS12_03680 64c7b083b884b8c91691aa73f1f0b6ce 527 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 208 214 - T 11-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VSVS12_03680 64c7b083b884b8c91691aa73f1f0b6ce 527 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 33 514 85.216 T 11-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 VSVS12_03680 64c7b083b884b8c91691aa73f1f0b6ce 527 SUPERFAMILY SSF55347 208 516 7.19E-114 T 11-10-2018 VSVS12_03680 64c7b083b884b8c91691aa73f1f0b6ce 527 Gene3D G3DSA:3.30.360.10 207 515 6.5E-125 T 11-10-2018 VSVS12_02513 1c758de3724b3b2d1d75a2c8bb503d33 306 Pfam PF00482 Type II secretion system (T2SS), protein F 139 263 8.0E-17 T 11-10-2018 IPR018076 Type II secretion system F domain VSVS12_04310 faf597f3fd425dc36b45b464bf070cb3 301 SUPERFAMILY SSF53850 93 269 7.78E-12 T 11-10-2018 VSVS12_04310 faf597f3fd425dc36b45b464bf070cb3 301 Pfam PF03466 LysR substrate binding domain 100 267 1.8E-7 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_04310 faf597f3fd425dc36b45b464bf070cb3 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 1.9E-8 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_04310 faf597f3fd425dc36b45b464bf070cb3 301 SUPERFAMILY SSF46785 2 83 1.9E-10 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_04310 faf597f3fd425dc36b45b464bf070cb3 301 Gene3D G3DSA:3.40.190.290 93 275 8.5E-12 T 11-10-2018 VSVS12_04310 faf597f3fd425dc36b45b464bf070cb3 301 Gene3D G3DSA:1.10.10.10 2 85 4.3E-10 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_00084 0a611bd8570217d9f23c334979ef8b31 411 Gene3D G3DSA:1.10.3860.10 1 398 2.1E-75 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VSVS12_00084 0a611bd8570217d9f23c334979ef8b31 411 SUPERFAMILY SSF118215 13 392 2.75E-80 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VSVS12_00084 0a611bd8570217d9f23c334979ef8b31 411 Pfam PF00375 Sodium:dicarboxylate symporter family 14 392 7.9E-81 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 VSVS12_00084 0a611bd8570217d9f23c334979ef8b31 411 PRINTS PR00173 Glutamate-aspartate symporter signature 183 202 6.6E-10 T 11-10-2018 VSVS12_00084 0a611bd8570217d9f23c334979ef8b31 411 PRINTS PR00173 Glutamate-aspartate symporter signature 8 28 6.6E-10 T 11-10-2018 VSVS12_00084 0a611bd8570217d9f23c334979ef8b31 411 PRINTS PR00173 Glutamate-aspartate symporter signature 285 311 6.6E-10 T 11-10-2018 VSVS12_00084 0a611bd8570217d9f23c334979ef8b31 411 PRINTS PR00173 Glutamate-aspartate symporter signature 347 367 6.6E-10 T 11-10-2018 VSVS12_04186 d4b1ed26217cd71505d0ad2263796d91 134 Pfam PF13671 AAA domain 6 101 2.4E-8 T 11-10-2018 VSVS12_04186 d4b1ed26217cd71505d0ad2263796d91 134 SUPERFAMILY SSF52540 5 112 3.17E-10 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_04186 d4b1ed26217cd71505d0ad2263796d91 134 Gene3D G3DSA:3.40.50.300 4 129 2.3E-22 T 11-10-2018 VSVS12_00031 b8c39a63be366c69a380aff2bb3f1231 329 SUPERFAMILY SSF53474 37 319 1.47E-36 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold VSVS12_00031 b8c39a63be366c69a380aff2bb3f1231 329 Pfam PF12146 Serine aminopeptidase, S33 55 312 3.8E-59 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 VSVS12_00031 b8c39a63be366c69a380aff2bb3f1231 329 Gene3D G3DSA:3.40.50.1820 27 329 6.3E-47 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold VSVS12_01024 67ab9f1427edc82d28289f2ba300f2d0 623 SMART SM00283 361 622 1.3E-75 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_01024 67ab9f1427edc82d28289f2ba300f2d0 623 SUPERFAMILY SSF103190 93 184 1.1E-15 T 11-10-2018 IPR029151 Periplasmic sensor-like domain superfamily VSVS12_01024 67ab9f1427edc82d28289f2ba300f2d0 623 Gene3D G3DSA:3.30.450.20 49 266 9.2E-68 T 11-10-2018 VSVS12_01024 67ab9f1427edc82d28289f2ba300f2d0 623 Pfam PF00672 HAMP domain 294 343 1.3E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_01024 67ab9f1427edc82d28289f2ba300f2d0 623 SUPERFAMILY SSF58104 314 621 4.19E-74 T 11-10-2018 VSVS12_01024 67ab9f1427edc82d28289f2ba300f2d0 623 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 423 589 1.5E-44 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_01024 67ab9f1427edc82d28289f2ba300f2d0 623 Pfam PF02743 Cache domain 41 253 9.1E-32 T 11-10-2018 IPR033479 Double Cache domain 1 VSVS12_01024 67ab9f1427edc82d28289f2ba300f2d0 623 Gene3D G3DSA:1.10.287.950 292 623 3.9E-68 T 11-10-2018 VSVS12_01024 67ab9f1427edc82d28289f2ba300f2d0 623 SMART SM00304 292 346 7.7E-11 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_01024 67ab9f1427edc82d28289f2ba300f2d0 623 Gene3D G3DSA:3.30.450.20 62 173 9.2E-68 T 11-10-2018 VSVS12_00947 96ebdf3f5c4b521164b8d99e85d2ae4e 135 Pfam PF00571 CBS domain 78 125 4.0E-8 T 11-10-2018 IPR000644 CBS domain VSVS12_00947 96ebdf3f5c4b521164b8d99e85d2ae4e 135 Pfam PF00571 CBS domain 9 64 0.0046 T 11-10-2018 IPR000644 CBS domain VSVS12_00947 96ebdf3f5c4b521164b8d99e85d2ae4e 135 SMART SM00116 16 65 0.21 T 11-10-2018 IPR000644 CBS domain VSVS12_00947 96ebdf3f5c4b521164b8d99e85d2ae4e 135 SMART SM00116 83 130 0.0017 T 11-10-2018 IPR000644 CBS domain VSVS12_00947 96ebdf3f5c4b521164b8d99e85d2ae4e 135 Gene3D G3DSA:3.10.580.10 2 134 4.8E-27 T 11-10-2018 VSVS12_00947 96ebdf3f5c4b521164b8d99e85d2ae4e 135 SUPERFAMILY SSF54631 7 126 2.15E-24 T 11-10-2018 VSVS12_01897 353ef309c01cab02ac109e60b14fd9d3 460 Pfam PF04715 Anthranilate synthase component I, N terminal region 24 156 4.0E-28 T 11-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VSVS12_01897 353ef309c01cab02ac109e60b14fd9d3 460 SUPERFAMILY SSF56322 14 458 6.15E-146 T 11-10-2018 IPR005801 ADC synthase GO:0009058 VSVS12_01897 353ef309c01cab02ac109e60b14fd9d3 460 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 110 451 2.8E-122 T 11-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 VSVS12_01897 353ef309c01cab02ac109e60b14fd9d3 460 PRINTS PR00095 Anthranilate synthase component I signature 311 324 1.1E-17 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VSVS12_01897 353ef309c01cab02ac109e60b14fd9d3 460 PRINTS PR00095 Anthranilate synthase component I signature 391 405 1.1E-17 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VSVS12_01897 353ef309c01cab02ac109e60b14fd9d3 460 PRINTS PR00095 Anthranilate synthase component I signature 297 310 1.1E-17 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VSVS12_01897 353ef309c01cab02ac109e60b14fd9d3 460 PRINTS PR00095 Anthranilate synthase component I signature 406 420 1.1E-17 T 11-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 VSVS12_01897 353ef309c01cab02ac109e60b14fd9d3 460 Pfam PF00425 chorismate binding enzyme 196 449 1.2E-95 T 11-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal VSVS12_01897 353ef309c01cab02ac109e60b14fd9d3 460 Gene3D G3DSA:3.60.120.10 5 459 4.2E-172 T 11-10-2018 IPR005801 ADC synthase GO:0009058 VSVS12_02126 0d8f1c0ce8640c01f2c85d5c041ba2bb 943 Gene3D G3DSA:3.30.830.10 344 472 3.6E-14 T 11-10-2018 VSVS12_02126 0d8f1c0ce8640c01f2c85d5c041ba2bb 943 SUPERFAMILY SSF63411 532 747 3.84E-17 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VSVS12_02126 0d8f1c0ce8640c01f2c85d5c041ba2bb 943 Gene3D G3DSA:3.30.830.10 762 942 4.1E-18 T 11-10-2018 VSVS12_02126 0d8f1c0ce8640c01f2c85d5c041ba2bb 943 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 75 98 - T 11-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 VSVS12_02126 0d8f1c0ce8640c01f2c85d5c041ba2bb 943 SUPERFAMILY SSF63411 357 475 1.22E-9 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VSVS12_02126 0d8f1c0ce8640c01f2c85d5c041ba2bb 943 Gene3D G3DSA:3.30.830.10 534 742 1.9E-14 T 11-10-2018 VSVS12_02126 0d8f1c0ce8640c01f2c85d5c041ba2bb 943 Pfam PF05193 Peptidase M16 inactive domain 695 874 7.3E-13 T 11-10-2018 IPR007863 Peptidase M16, C-terminal VSVS12_02126 0d8f1c0ce8640c01f2c85d5c041ba2bb 943 Pfam PF05193 Peptidase M16 inactive domain 217 398 1.6E-10 T 11-10-2018 IPR007863 Peptidase M16, C-terminal VSVS12_02126 0d8f1c0ce8640c01f2c85d5c041ba2bb 943 Pfam PF00675 Insulinase (Peptidase family M16) 62 176 1.1E-25 T 11-10-2018 IPR011765 Peptidase M16, N-terminal VSVS12_02126 0d8f1c0ce8640c01f2c85d5c041ba2bb 943 Gene3D G3DSA:3.30.830.10 48 260 4.9E-60 T 11-10-2018 VSVS12_02126 0d8f1c0ce8640c01f2c85d5c041ba2bb 943 SUPERFAMILY SSF63411 771 937 1.35E-13 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VSVS12_02126 0d8f1c0ce8640c01f2c85d5c041ba2bb 943 SUPERFAMILY SSF63411 44 254 4.71E-44 T 11-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 VSVS12_04583 0b38dbc3557c94a91ed5effa1754b732 331 SUPERFAMILY SSF140931 59 257 8.37E-39 T 11-10-2018 IPR036597 Fido-like domain superfamily VSVS12_04583 0b38dbc3557c94a91ed5effa1754b732 331 Gene3D G3DSA:1.10.3290.10 3 255 2.8E-45 T 11-10-2018 IPR036597 Fido-like domain superfamily VSVS12_04583 0b38dbc3557c94a91ed5effa1754b732 331 Pfam PF13776 Domain of unknown function (DUF4172) 5 46 1.6E-12 T 11-10-2018 IPR025230 Domain of unknown function DUF4172 VSVS12_04583 0b38dbc3557c94a91ed5effa1754b732 331 Pfam PF02661 Fic/DOC family 75 187 1.6E-15 T 11-10-2018 IPR003812 Fido domain VSVS12_00839 be56a888f2f0e1efd5b9291e1cfc94a9 253 Pfam PF11101 Protein of unknown function (DUF2884) 27 251 9.2E-68 T 11-10-2018 IPR021307 Protein of unknown function DUF2884 VSVS12_04066 d38045cdb2fc7fad07bf872a8c67f2c6 134 SUPERFAMILY SSF159888 7 126 2.09E-9 T 11-10-2018 VSVS12_04066 d38045cdb2fc7fad07bf872a8c67f2c6 134 Pfam PF08818 Domain of unknown function (DU1801) 19 120 1.2E-9 T 11-10-2018 IPR014922 Domain of unknown function DUF1801 VSVS12_00928 14fc4f03040a5b0c0db8b9e130f7a254 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 2.2E-50 T 11-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 VSVS12_00928 14fc4f03040a5b0c0db8b9e130f7a254 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 2.9E-49 T 11-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 VSVS12_00928 14fc4f03040a5b0c0db8b9e130f7a254 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 11-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 VSVS12_00928 14fc4f03040a5b0c0db8b9e130f7a254 169 Gene3D G3DSA:2.70.70.10 9 169 4.9E-62 T 11-10-2018 IPR011055 Duplicated hybrid motif VSVS12_00928 14fc4f03040a5b0c0db8b9e130f7a254 169 SUPERFAMILY SSF51261 18 166 2.62E-55 T 11-10-2018 IPR011055 Duplicated hybrid motif VSVS12_01902 c9df97c763043c4ff30a3d8e00022681 453 Pfam PF03313 Serine dehydratase alpha chain 183 448 2.1E-96 T 11-10-2018 IPR005130 Serine dehydratase-like, alpha subunit VSVS12_01902 c9df97c763043c4ff30a3d8e00022681 453 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 7.6E-225 T 11-10-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 VSVS12_01902 c9df97c763043c4ff30a3d8e00022681 453 SUPERFAMILY SSF143548 16 157 1.52E-43 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 VSVS12_01902 c9df97c763043c4ff30a3d8e00022681 453 Gene3D G3DSA:3.30.1330.90 10 159 3.4E-49 T 11-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 VSVS12_01902 c9df97c763043c4ff30a3d8e00022681 453 Pfam PF03315 Serine dehydratase beta chain 3 155 3.5E-54 T 11-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 VSVS12_03364 0eeecfeec680e5eea8167a9067567887 180 Gene3D G3DSA:1.20.120.450 4 175 7.6E-38 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes VSVS12_03364 0eeecfeec680e5eea8167a9067567887 180 Pfam PF05163 DinB family 1 174 7.6E-30 T 11-10-2018 IPR007837 DNA damage-inducible protein DinB VSVS12_03364 0eeecfeec680e5eea8167a9067567887 180 SUPERFAMILY SSF109854 6 161 3.85E-28 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes VSVS12_03286 d27a0552c94892be748fe1e879427bbb 162 Pfam PF13592 Winged helix-turn helix 100 156 2.0E-13 T 11-10-2018 IPR025959 Winged helix-turn helix domain VSVS12_03286 d27a0552c94892be748fe1e879427bbb 162 SUPERFAMILY SSF46689 16 132 8.78E-18 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_03286 d27a0552c94892be748fe1e879427bbb 162 Pfam PF13551 Winged helix-turn helix 24 83 7.9E-13 T 11-10-2018 VSVS12_01924 f21852cfc4177f3f33610e5ebca07f38 412 Pfam PF00266 Aminotransferase class-V 26 401 3.5E-63 T 11-10-2018 IPR000192 Aminotransferase class V domain VSVS12_01924 f21852cfc4177f3f33610e5ebca07f38 412 TIGRFAM TIGR01976 am_tr_V_VC1184: cysteine desulfurase family protein 3 405 1.6E-155 T 11-10-2018 IPR011340 Cysteine desulfurase-related VSVS12_01924 f21852cfc4177f3f33610e5ebca07f38 412 SUPERFAMILY SSF53383 5 408 1.11E-87 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VSVS12_01924 f21852cfc4177f3f33610e5ebca07f38 412 Gene3D G3DSA:3.90.1150.10 25 405 6.9E-128 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VSVS12_01924 f21852cfc4177f3f33610e5ebca07f38 412 Gene3D G3DSA:3.40.640.10 33 289 6.9E-128 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VSVS12_04295 5baea75400e0b8e9b0b2c565bba9ca29 542 SUPERFAMILY SSF58104 233 542 2.22E-69 T 11-10-2018 VSVS12_04295 5baea75400e0b8e9b0b2c565bba9ca29 542 Pfam PF00672 HAMP domain 215 261 1.7E-9 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_04295 5baea75400e0b8e9b0b2c565bba9ca29 542 SMART SM00283 280 541 8.3E-66 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_04295 5baea75400e0b8e9b0b2c565bba9ca29 542 SMART SM00304 213 265 9.8E-13 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_04295 5baea75400e0b8e9b0b2c565bba9ca29 542 Gene3D G3DSA:1.10.287.950 213 542 1.5E-72 T 11-10-2018 VSVS12_04295 5baea75400e0b8e9b0b2c565bba9ca29 542 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 343 508 2.9E-41 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_00041 44892367c1ebe5070765090c1143656a 842 Pfam PF01295 Adenylate cyclase, class-I 227 828 1.1E-256 T 11-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 VSVS12_00041 44892367c1ebe5070765090c1143656a 842 Pfam PF12633 Adenylate cyclase NT domain 5 198 2.0E-75 T 11-10-2018 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 VSVS12_00041 44892367c1ebe5070765090c1143656a 842 PIRSF PIRSF001444 1 842 0.0 T 11-10-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 VSVS12_02382 519d2b2cda87281e6a7710a3e58cdb14 524 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 510 2.5E-210 T 11-10-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 VSVS12_02382 519d2b2cda87281e6a7710a3e58cdb14 524 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 452 469 - T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VSVS12_02382 519d2b2cda87281e6a7710a3e58cdb14 524 Pfam PF02378 Phosphotransferase system, EIIC 11 353 2.7E-64 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VSVS12_02382 519d2b2cda87281e6a7710a3e58cdb14 524 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 411 499 4.7E-22 T 11-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VSVS12_02382 519d2b2cda87281e6a7710a3e58cdb14 524 Pfam PF00367 phosphotransferase system, EIIB 441 473 7.9E-13 T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VSVS12_02382 519d2b2cda87281e6a7710a3e58cdb14 524 Gene3D G3DSA:3.30.1360.60 436 515 2.6E-24 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VSVS12_02382 519d2b2cda87281e6a7710a3e58cdb14 524 SUPERFAMILY SSF55604 439 511 6.41E-20 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VSVS12_01610 9349e2e345a9d23ffbb042d74d51211a 342 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 342 127.449 T 11-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 VSVS12_01610 9349e2e345a9d23ffbb042d74d51211a 342 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 54 329 1.2E-69 T 11-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 VSVS12_01610 9349e2e345a9d23ffbb042d74d51211a 342 Gene3D G3DSA:3.40.630.10 1 342 5.9E-117 T 11-10-2018 VSVS12_01610 9349e2e345a9d23ffbb042d74d51211a 342 PIRSF PIRSF017020 4 336 2.4E-118 T 11-10-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 VSVS12_01610 9349e2e345a9d23ffbb042d74d51211a 342 SUPERFAMILY SSF53187 10 329 2.91E-74 T 11-10-2018 VSVS12_01915 d9b21ef72b72b0fcf8e9716a66b23b8e 213 Pfam PF13505 Outer membrane protein beta-barrel domain 62 180 2.8E-8 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel VSVS12_01915 d9b21ef72b72b0fcf8e9716a66b23b8e 213 Gene3D G3DSA:2.40.160.20 38 194 1.4E-8 T 11-10-2018 VSVS12_01915 d9b21ef72b72b0fcf8e9716a66b23b8e 213 SUPERFAMILY SSF56925 48 181 9.16E-9 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VSVS12_00705 75fe529688fce924d635a5713f7b4ef3 331 SUPERFAMILY SSF52540 10 262 9.45E-62 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00705 75fe529688fce924d635a5713f7b4ef3 331 SMART SM00382 43 241 3.1E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_00705 75fe529688fce924d635a5713f7b4ef3 331 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_00705 75fe529688fce924d635a5713f7b4ef3 331 Pfam PF00005 ABC transporter 35 192 9.4E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_00705 75fe529688fce924d635a5713f7b4ef3 331 Gene3D G3DSA:3.40.50.300 9 331 2.1E-80 T 11-10-2018 VSVS12_00705 75fe529688fce924d635a5713f7b4ef3 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 243 308 1.9E-17 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VSVS12_00705 75fe529688fce924d635a5713f7b4ef3 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 241 328 3.3E-22 T 11-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 VSVS12_03152 ada74d2c129c041f5d35388df4ed59e9 124 Pfam PF04076 Bacterial OB fold (BOF) protein 24 122 8.5E-23 T 11-10-2018 IPR005220 Bacterial OB-fold VSVS12_03152 ada74d2c129c041f5d35388df4ed59e9 124 Gene3D G3DSA:2.40.50.200 18 124 2.7E-31 T 11-10-2018 IPR036700 Bacterial OB-fold superfamily VSVS12_03152 ada74d2c129c041f5d35388df4ed59e9 124 SUPERFAMILY SSF101756 27 123 4.45E-28 T 11-10-2018 IPR036700 Bacterial OB-fold superfamily VSVS12_01554 7d880acf7f3d81416fdf11679487aedc 34 Gene3D G3DSA:3.30.1460.30 2 34 3.6E-6 T 11-10-2018 VSVS12_01554 7d880acf7f3d81416fdf11679487aedc 34 Pfam PF04993 TfoX N-terminal domain 8 34 4.7E-7 T 11-10-2018 IPR007076 TfoX, N-terminal VSVS12_01554 7d880acf7f3d81416fdf11679487aedc 34 SUPERFAMILY SSF159894 2 34 2.88E-9 T 11-10-2018 VSVS12_01320 860f61898111ed5e12d36d6bdd8ce7e5 166 SUPERFAMILY SSF54523 11 90 7.46E-8 T 11-10-2018 VSVS12_01320 860f61898111ed5e12d36d6bdd8ce7e5 166 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 31 1.0E-5 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_01320 860f61898111ed5e12d36d6bdd8ce7e5 166 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_01320 860f61898111ed5e12d36d6bdd8ce7e5 166 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 31 6.0E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_01320 860f61898111ed5e12d36d6bdd8ce7e5 166 Gene3D G3DSA:3.30.700.10 11 153 2.1E-8 T 11-10-2018 VSVS12_04500 f2b2efe70b6f5bfb4d37ce3446d4b861 305 Gene3D G3DSA:1.10.443.10 123 303 4.6E-13 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VSVS12_04500 f2b2efe70b6f5bfb4d37ce3446d4b861 305 SUPERFAMILY SSF56349 40 299 2.53E-14 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VSVS12_04500 f2b2efe70b6f5bfb4d37ce3446d4b861 305 Pfam PF00589 Phage integrase family 126 299 2.6E-5 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VSVS12_01756 80ffdb3283c4bde1251764dab90d832f 161 SUPERFAMILY SSF55729 1 122 1.37E-6 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_01756 80ffdb3283c4bde1251764dab90d832f 161 Gene3D G3DSA:3.40.630.30 1 123 2.7E-7 T 11-10-2018 VSVS12_02239 3798ee2cc7f057bea981aaaefd3cb3ad 183 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 176 5.0E-71 T 11-10-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 VSVS12_02239 3798ee2cc7f057bea981aaaefd3cb3ad 183 ProSitePatterns PS00194 Thioredoxin family active site. 71 89 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VSVS12_02239 3798ee2cc7f057bea981aaaefd3cb3ad 183 Gene3D G3DSA:3.40.30.10 19 183 2.4E-44 T 11-10-2018 VSVS12_02239 3798ee2cc7f057bea981aaaefd3cb3ad 183 Pfam PF08534 Redoxin 41 163 3.6E-25 T 11-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 VSVS12_02239 3798ee2cc7f057bea981aaaefd3cb3ad 183 SUPERFAMILY SSF52833 46 178 1.63E-38 T 11-10-2018 IPR036249 Thioredoxin-like superfamily VSVS12_00655 ca33e92a75617847f270ce977f17b8bc 149 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 142 1.0E-30 T 11-10-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 VSVS12_00655 ca33e92a75617847f270ce977f17b8bc 149 Gene3D G3DSA:3.40.50.10110 1 146 8.5E-41 T 11-10-2018 IPR036768 DNA polymerase III subunit chi superfamily VSVS12_00655 ca33e92a75617847f270ce977f17b8bc 149 SUPERFAMILY SSF102400 1 146 2.35E-40 T 11-10-2018 IPR036768 DNA polymerase III subunit chi superfamily VSVS12_00120 7503e4c8c3fb1528e7a6f8df2f8f616d 221 Pfam PF01926 50S ribosome-binding GTPase 29 147 1.2E-19 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 VSVS12_00120 7503e4c8c3fb1528e7a6f8df2f8f616d 221 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 15 198 26.997 T 11-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 VSVS12_00120 7503e4c8c3fb1528e7a6f8df2f8f616d 221 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 11 194 3.3E-71 T 11-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 VSVS12_00120 7503e4c8c3fb1528e7a6f8df2f8f616d 221 Gene3D G3DSA:3.40.50.300 2 202 8.7E-57 T 11-10-2018 VSVS12_00120 7503e4c8c3fb1528e7a6f8df2f8f616d 221 SUPERFAMILY SSF52540 6 198 5.6E-34 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03432 e751ffddf0b7f8d9552aba911b535330 402 SUPERFAMILY SSF103473 6 391 1.07E-54 T 11-10-2018 IPR036259 MFS transporter superfamily VSVS12_03432 e751ffddf0b7f8d9552aba911b535330 402 Pfam PF07690 Major Facilitator Superfamily 27 357 3.1E-36 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VSVS12_03432 e751ffddf0b7f8d9552aba911b535330 402 Gene3D G3DSA:1.20.1250.20 8 394 5.3E-47 T 11-10-2018 VSVS12_01066 d95ac73cfb0ccfb7d08578912ce3a0cf 159 Pfam PF01967 MoaC family 15 150 8.4E-56 T 11-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VSVS12_01066 d95ac73cfb0ccfb7d08578912ce3a0cf 159 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 158 35.901 T 11-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VSVS12_01066 d95ac73cfb0ccfb7d08578912ce3a0cf 159 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 1.4E-71 T 11-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VSVS12_01066 d95ac73cfb0ccfb7d08578912ce3a0cf 159 Gene3D G3DSA:3.30.70.640 1 159 9.3E-70 T 11-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VSVS12_01066 d95ac73cfb0ccfb7d08578912ce3a0cf 159 SUPERFAMILY SSF55040 11 155 1.7E-61 T 11-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 VSVS12_01591 cf14d165dd2a7d3b7e0ca1ffb6495993 215 Pfam PF05724 Thiopurine S-methyltransferase (TPMT) 3 214 4.2E-69 T 11-10-2018 IPR008854 TPMT family GO:0008757 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 VSVS12_01591 cf14d165dd2a7d3b7e0ca1ffb6495993 215 SUPERFAMILY SSF53335 2 213 1.71E-51 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_01591 cf14d165dd2a7d3b7e0ca1ffb6495993 215 TIGRFAM TIGR03840 TMPT_Se_Te: thiopurine S-methyltransferase, Se/Te detoxification family 5 214 2.6E-77 T 11-10-2018 IPR022474 Thiopurine S-methyltransferase, Se/Te detoxification GO:0008119|GO:0010038|GO:0032259 KEGG: 00983+2.1.1.67 VSVS12_01591 cf14d165dd2a7d3b7e0ca1ffb6495993 215 Hamap MF_00812 Thiopurine S-methyltransferase [tpm]. 2 215 35.057 T 11-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 VSVS12_01591 cf14d165dd2a7d3b7e0ca1ffb6495993 215 Gene3D G3DSA:3.40.50.150 1 215 2.6E-56 T 11-10-2018 VSVS12_01591 cf14d165dd2a7d3b7e0ca1ffb6495993 215 PIRSF PIRSF023956 1 215 7.8E-71 T 11-10-2018 IPR025835 Thiopurine S-methyltransferase GO:0008119 KEGG: 00983+2.1.1.67|Reactome: R-HSA-156581|Reactome: R-HSA-5578995 VSVS12_02485 8f81f9a150dc4203ad83d2331de135bd 110 SUPERFAMILY SSF55331 1 110 5.74E-37 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily VSVS12_02485 8f81f9a150dc4203ad83d2331de135bd 110 Gene3D G3DSA:3.30.429.10 1 110 2.6E-44 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily VSVS12_02485 8f81f9a150dc4203ad83d2331de135bd 110 Pfam PF08921 Domain of unknown function (DUF1904) 1 109 4.2E-38 T 11-10-2018 IPR015017 Protein of unknown function DUF1904 VSVS12_01529 98eff155070c9a97b321b3004bd9451d 493 PIRSF PIRSF006615 1 493 1.8E-197 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VSVS12_01529 98eff155070c9a97b321b3004bd9451d 493 Gene3D G3DSA:1.10.1370.30 1 493 5.9E-195 T 11-10-2018 VSVS12_01529 98eff155070c9a97b321b3004bd9451d 493 SUPERFAMILY SSF55486 1 493 4.64E-117 T 11-10-2018 VSVS12_01529 98eff155070c9a97b321b3004bd9451d 493 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 261 280 3.9E-45 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VSVS12_01529 98eff155070c9a97b321b3004bd9451d 493 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 400 421 3.9E-45 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VSVS12_01529 98eff155070c9a97b321b3004bd9451d 493 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 288 304 3.9E-45 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VSVS12_01529 98eff155070c9a97b321b3004bd9451d 493 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 145 165 3.9E-45 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VSVS12_01529 98eff155070c9a97b321b3004bd9451d 493 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 330 349 3.9E-45 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VSVS12_01529 98eff155070c9a97b321b3004bd9451d 493 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 241 260 3.9E-45 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VSVS12_01529 98eff155070c9a97b321b3004bd9451d 493 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 444 462 3.9E-45 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VSVS12_01529 98eff155070c9a97b321b3004bd9451d 493 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 11 492 5.3E-97 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VSVS12_03161 d27ff8a76af5fb9fa976204cdc0ddfe6 317 Gene3D G3DSA:3.20.20.70 1 317 2.4E-139 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_03161 d27ff8a76af5fb9fa976204cdc0ddfe6 317 Hamap MF_00492 Transaldolase [tal]. 1 317 51.545 T 11-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VSVS12_03161 d27ff8a76af5fb9fa976204cdc0ddfe6 317 TIGRFAM TIGR00874 talAB: transaldolase 2 317 1.8E-155 T 11-10-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VSVS12_03161 d27ff8a76af5fb9fa976204cdc0ddfe6 317 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 13 313 5.4E-100 T 11-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VSVS12_03161 d27ff8a76af5fb9fa976204cdc0ddfe6 317 ProSitePatterns PS01054 Transaldolase signature 1. 30 38 - T 11-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VSVS12_03161 d27ff8a76af5fb9fa976204cdc0ddfe6 317 SUPERFAMILY SSF51569 1 316 9.52E-112 T 11-10-2018 VSVS12_03161 d27ff8a76af5fb9fa976204cdc0ddfe6 317 ProSitePatterns PS00958 Transaldolase active site. 128 145 - T 11-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 VSVS12_02404 5f347cb874eec399b5455bbd6f92ff3e 426 SMART SM01091 340 421 1.5E-22 T 11-10-2018 IPR005170 Transporter-associated domain VSVS12_02404 5f347cb874eec399b5455bbd6f92ff3e 426 Gene3D G3DSA:3.10.580.10 191 337 5.5E-41 T 11-10-2018 VSVS12_02404 5f347cb874eec399b5455bbd6f92ff3e 426 SUPERFAMILY SSF56176 344 420 4.91E-19 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VSVS12_02404 5f347cb874eec399b5455bbd6f92ff3e 426 Pfam PF03471 Transporter associated domain 343 420 3.0E-18 T 11-10-2018 IPR005170 Transporter-associated domain VSVS12_02404 5f347cb874eec399b5455bbd6f92ff3e 426 Pfam PF00571 CBS domain 278 328 0.0076 T 11-10-2018 IPR000644 CBS domain VSVS12_02404 5f347cb874eec399b5455bbd6f92ff3e 426 SUPERFAMILY SSF54631 196 330 3.92E-26 T 11-10-2018 VSVS12_02404 5f347cb874eec399b5455bbd6f92ff3e 426 Pfam PF01595 Domain of unknown function DUF21 5 194 8.7E-45 T 11-10-2018 IPR002550 CNNM, transmembrane domain VSVS12_02404 5f347cb874eec399b5455bbd6f92ff3e 426 Gene3D G3DSA:3.30.465.10 338 419 2.3E-20 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 VSVS12_00404 01d1869a002b2cdd1ad1db2d61935092 885 Pfam PF02563 Polysaccharide biosynthesis/export protein 118 180 2.4E-13 T 11-10-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 VSVS12_00404 01d1869a002b2cdd1ad1db2d61935092 885 Gene3D G3DSA:3.30.1950.10 124 190 2.9E-5 T 11-10-2018 VSVS12_00404 01d1869a002b2cdd1ad1db2d61935092 885 Pfam PF10531 SLBB domain 199 247 5.1E-8 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VSVS12_00404 01d1869a002b2cdd1ad1db2d61935092 885 Pfam PF10531 SLBB domain 282 325 1.1E-9 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VSVS12_00404 01d1869a002b2cdd1ad1db2d61935092 885 Pfam PF10531 SLBB domain 552 592 2.0E-8 T 11-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 VSVS12_00404 01d1869a002b2cdd1ad1db2d61935092 885 Gene3D G3DSA:3.10.560.10 360 451 3.8E-7 T 11-10-2018 VSVS12_00404 01d1869a002b2cdd1ad1db2d61935092 885 Gene3D G3DSA:3.10.560.10 277 359 1.7E-14 T 11-10-2018 VSVS12_00404 01d1869a002b2cdd1ad1db2d61935092 885 Gene3D G3DSA:3.10.560.10 778 856 9.1E-11 T 11-10-2018 VSVS12_00404 01d1869a002b2cdd1ad1db2d61935092 885 Gene3D G3DSA:3.10.560.10 191 276 1.7E-17 T 11-10-2018 VSVS12_00404 01d1869a002b2cdd1ad1db2d61935092 885 Gene3D G3DSA:3.10.560.10 538 636 6.0E-13 T 11-10-2018 VSVS12_00404 01d1869a002b2cdd1ad1db2d61935092 885 Pfam PF06251 Capsule biosynthesis GfcC 658 858 2.0E-11 T 11-10-2018 IPR010425 Domain of unknown function DUF1017 VSVS12_01070 af3ce6706a6eef591c2cb9cba0ad602c 486 Pfam PF01554 MatE 29 184 9.9E-25 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VSVS12_01070 af3ce6706a6eef591c2cb9cba0ad602c 486 Pfam PF01554 MatE 243 402 3.8E-21 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VSVS12_01070 af3ce6706a6eef591c2cb9cba0ad602c 486 PIRSF PIRSF006603 1 445 8.8E-78 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VSVS12_01070 af3ce6706a6eef591c2cb9cba0ad602c 486 TIGRFAM TIGR00797 matE: MATE efflux family protein 28 413 8.2E-61 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VSVS12_01212 a609a976249317a37ecbc67084f864bf 449 SUPERFAMILY SSF52540 11 235 2.49E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01212 a609a976249317a37ecbc67084f864bf 449 Gene3D G3DSA:1.10.8.60 166 241 8.9E-24 T 11-10-2018 VSVS12_01212 a609a976249317a37ecbc67084f864bf 449 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 54 159 7.6E-17 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VSVS12_01212 a609a976249317a37ecbc67084f864bf 449 Gene3D G3DSA:1.10.3710.10 347 448 9.6E-37 T 11-10-2018 VSVS12_01212 a609a976249317a37ecbc67084f864bf 449 SMART SM00382 50 166 5.4E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_01212 a609a976249317a37ecbc67084f864bf 449 Gene3D G3DSA:3.40.50.300 6 165 7.0E-49 T 11-10-2018 VSVS12_01212 a609a976249317a37ecbc67084f864bf 449 SUPERFAMILY SSF48019 253 435 1.36E-72 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 VSVS12_01212 a609a976249317a37ecbc67084f864bf 449 Gene3D G3DSA:1.20.272.10 242 346 2.3E-43 T 11-10-2018 VSVS12_01212 a609a976249317a37ecbc67084f864bf 449 Pfam PF16193 AAA C-terminal domain 192 268 2.1E-20 T 11-10-2018 IPR032423 AAA C-terminal domain VSVS12_01212 a609a976249317a37ecbc67084f864bf 449 Pfam PF12002 MgsA AAA+ ATPase C terminal 269 435 5.6E-67 T 11-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal VSVS12_04495 fe109ccd41664e7b8b5c0eec22313cac 591 SUPERFAMILY SSF52540 7 362 6.07E-16 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_04495 fe109ccd41664e7b8b5c0eec22313cac 591 Pfam PF13175 AAA ATPase domain 19 342 2.6E-21 T 11-10-2018 VSVS12_03808 8e0e6d7d2d364ffc5e9cb79da064ec9b 158 SUPERFAMILY SSF46785 5 140 8.63E-30 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_03808 8e0e6d7d2d364ffc5e9cb79da064ec9b 158 Pfam PF01047 MarR family 31 89 2.0E-15 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VSVS12_03808 8e0e6d7d2d364ffc5e9cb79da064ec9b 158 SMART SM00347 24 121 3.7E-17 T 11-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 VSVS12_03808 8e0e6d7d2d364ffc5e9cb79da064ec9b 158 Gene3D G3DSA:1.10.10.10 1 143 9.8E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_00479 96f61332f932b215f42a8c5815d46551 63 Pfam PF00831 Ribosomal L29 protein 4 60 2.3E-24 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00479 96f61332f932b215f42a8c5815d46551 63 Gene3D G3DSA:1.10.287.310 1 63 1.2E-30 T 11-10-2018 VSVS12_00479 96f61332f932b215f42a8c5815d46551 63 SUPERFAMILY SSF46561 1 61 8.24E-23 T 11-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00479 96f61332f932b215f42a8c5815d46551 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.857 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00479 96f61332f932b215f42a8c5815d46551 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 11-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00479 96f61332f932b215f42a8c5815d46551 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 4.0E-23 T 11-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00647 41421c5d6a2c429a19c1244ab9c0218e 153 Gene3D G3DSA:3.30.70.140 1 100 2.3E-37 T 11-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily VSVS12_00647 41421c5d6a2c429a19c1244ab9c0218e 153 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 4.0E-43 T 11-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VSVS12_00647 41421c5d6a2c429a19c1244ab9c0218e 153 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 150 1.6E-19 T 11-10-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal VSVS12_00647 41421c5d6a2c429a19c1244ab9c0218e 153 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 33.723 T 11-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 VSVS12_00647 41421c5d6a2c429a19c1244ab9c0218e 153 SUPERFAMILY SSF54893 2 100 5.1E-36 T 11-10-2018 IPR036793 Aspartate carbamoyltransferase regulatory subunit, N-terminal domain superfamily VSVS12_00647 41421c5d6a2c429a19c1244ab9c0218e 153 SUPERFAMILY SSF57825 101 151 2.35E-16 T 11-10-2018 IPR036792 Aspartate carbamoyltransferase regulatory subunit, C-terminal domain superfamily VSVS12_00647 41421c5d6a2c429a19c1244ab9c0218e 153 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 97 7.3E-31 T 11-10-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal VSVS12_00647 41421c5d6a2c429a19c1244ab9c0218e 153 Gene3D G3DSA:2.30.30.20 101 153 1.2E-24 T 11-10-2018 VSVS12_00647 41421c5d6a2c429a19c1244ab9c0218e 153 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 150 6.6E-62 T 11-10-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 VSVS12_01738 ca4ffb84172c6b9abff1f526a1df8c8f 388 Pfam PF11279 Protein of unknown function (DUF3080) 50 385 2.2E-69 T 11-10-2018 IPR021431 Protein of unknown function DUF3080 VSVS12_03191 bacd21ac4e68f3267ba850458c69b8ab 323 SMART SM00470 53 149 0.0011 T 11-10-2018 IPR003115 ParB/Sulfiredoxin VSVS12_03191 bacd21ac4e68f3267ba850458c69b8ab 323 Gene3D G3DSA:1.10.10.2830 153 271 8.3E-15 T 11-10-2018 VSVS12_03191 bacd21ac4e68f3267ba850458c69b8ab 323 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 65 227 3.1E-21 T 11-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 VSVS12_03191 bacd21ac4e68f3267ba850458c69b8ab 323 SUPERFAMILY SSF110849 75 150 2.17E-8 T 11-10-2018 IPR036086 ParB/Sulfiredoxin superfamily VSVS12_03191 bacd21ac4e68f3267ba850458c69b8ab 323 Pfam PF02195 ParB-like nuclease domain 78 146 6.6E-6 T 11-10-2018 IPR003115 ParB/Sulfiredoxin VSVS12_02904 a7431984f6460df99451371e02d69691 429 Pfam PF01926 50S ribosome-binding GTPase 200 318 4.3E-20 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 VSVS12_02904 a7431984f6460df99451371e02d69691 429 SUPERFAMILY SSF54980 364 428 3.17E-17 T 11-10-2018 IPR035647 EF-G domain III/V-like VSVS12_02904 a7431984f6460df99451371e02d69691 429 SUPERFAMILY SSF52540 197 373 3.54E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02904 a7431984f6460df99451371e02d69691 429 Gene3D G3DSA:3.40.50.300 197 370 2.3E-41 T 11-10-2018 VSVS12_02904 a7431984f6460df99451371e02d69691 429 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 1.0E-155 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 VSVS12_02904 a7431984f6460df99451371e02d69691 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 3.9E-10 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 VSVS12_02904 a7431984f6460df99451371e02d69691 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 3.9E-10 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 VSVS12_02904 a7431984f6460df99451371e02d69691 429 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 3.9E-10 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 VSVS12_02904 a7431984f6460df99451371e02d69691 429 PIRSF PIRSF006809 3 423 1.4E-150 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 VSVS12_02904 a7431984f6460df99451371e02d69691 429 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 1.9E-30 T 11-10-2018 IPR025121 GTPase HflX, N-terminal VSVS12_02904 a7431984f6460df99451371e02d69691 429 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 2.7E-28 T 11-10-2018 IPR032305 GTP-binding protein, middle domain VSVS12_02904 a7431984f6460df99451371e02d69691 429 Hamap MF_00900 GTPase HflX [hflX]. 27 390 47.135 T 11-10-2018 IPR016496 GTPase HflX GO:0005525 VSVS12_02904 a7431984f6460df99451371e02d69691 429 Gene3D G3DSA:3.40.50.11060 18 138 2.0E-36 T 11-10-2018 VSVS12_01362 971808afb9bd1d9adddda88527222dd4 228 Pfam PF00005 ABC transporter 24 172 2.4E-33 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_01362 971808afb9bd1d9adddda88527222dd4 228 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 4 223 2.0E-109 T 11-10-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0016020|GO:0044873 VSVS12_01362 971808afb9bd1d9adddda88527222dd4 228 SUPERFAMILY SSF52540 4 225 6.14E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01362 971808afb9bd1d9adddda88527222dd4 228 SMART SM00382 33 221 1.8E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_01362 971808afb9bd1d9adddda88527222dd4 228 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_01362 971808afb9bd1d9adddda88527222dd4 228 Gene3D G3DSA:3.40.50.300 1 228 2.3E-64 T 11-10-2018 VSVS12_01658 0ce23799735a18e2bb125d5cb0892dcd 277 Pfam PF13509 S1 domain 71 132 7.2E-5 T 11-10-2018 IPR039566 Conserved virulence factor B, S1 domain VSVS12_01658 0ce23799735a18e2bb125d5cb0892dcd 277 Pfam PF13509 S1 domain 4 63 5.1E-19 T 11-10-2018 IPR039566 Conserved virulence factor B, S1 domain VSVS12_01658 0ce23799735a18e2bb125d5cb0892dcd 277 PIRSF PIRSF012524 1 277 1.8E-95 T 11-10-2018 IPR014464 Conserved virulence factor B VSVS12_01658 0ce23799735a18e2bb125d5cb0892dcd 277 Gene3D G3DSA:1.10.10.10 215 277 6.1E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_01658 0ce23799735a18e2bb125d5cb0892dcd 277 SMART SM00316 145 207 3.1 T 11-10-2018 IPR022967 RNA-binding domain, S1 VSVS12_01658 0ce23799735a18e2bb125d5cb0892dcd 277 SMART SM00316 3 64 20.0 T 11-10-2018 IPR022967 RNA-binding domain, S1 VSVS12_01658 0ce23799735a18e2bb125d5cb0892dcd 277 SMART SM00316 69 132 7.5 T 11-10-2018 IPR022967 RNA-binding domain, S1 VSVS12_02355 3e535ebcb3ab9bf30396244cada5fe26 649 SUPERFAMILY SSF50978 179 396 1.21E-7 T 11-10-2018 IPR036322 WD40-repeat-containing domain superfamily GO:0005515 VSVS12_02355 3e535ebcb3ab9bf30396244cada5fe26 649 Gene3D G3DSA:2.130.10.10 163 310 3.3E-7 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VSVS12_01398 74db7037d9bde91c89a0a1fc432b6a1f 941 Pfam PF00012 Hsp70 protein 90 324 1.2E-13 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VSVS12_01398 74db7037d9bde91c89a0a1fc432b6a1f 941 PRINTS PR00301 70kDa heat shock protein signature 165 185 1.4E-7 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VSVS12_01398 74db7037d9bde91c89a0a1fc432b6a1f 941 PRINTS PR00301 70kDa heat shock protein signature 232 242 1.4E-7 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VSVS12_01398 74db7037d9bde91c89a0a1fc432b6a1f 941 PRINTS PR00301 70kDa heat shock protein signature 6 19 1.4E-7 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VSVS12_01398 74db7037d9bde91c89a0a1fc432b6a1f 941 Pfam PF12531 DNA-K related protein 691 938 1.2E-101 T 11-10-2018 IPR021030 Protein of unknown function DUF3731 VSVS12_01398 74db7037d9bde91c89a0a1fc432b6a1f 941 SUPERFAMILY SSF53067 6 209 6.91E-29 T 11-10-2018 VSVS12_01398 74db7037d9bde91c89a0a1fc432b6a1f 941 SUPERFAMILY SSF53067 223 463 1.52E-19 T 11-10-2018 VSVS12_02991 ee5ea0ec6595aa15222eddf940ec09e7 366 Gene3D G3DSA:3.10.580.10 186 315 4.1E-38 T 11-10-2018 VSVS12_02991 ee5ea0ec6595aa15222eddf940ec09e7 366 Pfam PF00571 CBS domain 262 312 1.4E-6 T 11-10-2018 IPR000644 CBS domain VSVS12_02991 ee5ea0ec6595aa15222eddf940ec09e7 366 Pfam PF01595 Domain of unknown function DUF21 10 177 4.9E-28 T 11-10-2018 IPR002550 CNNM, transmembrane domain VSVS12_02991 ee5ea0ec6595aa15222eddf940ec09e7 366 SUPERFAMILY SSF54631 181 315 8.17E-26 T 11-10-2018 VSVS12_03266 009ed526c15e4d52a53cf154b4f809ca 163 SUPERFAMILY SSF50891 1 162 3.51E-54 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily VSVS12_03266 009ed526c15e4d52a53cf154b4f809ca 163 Gene3D G3DSA:2.40.100.10 1 163 4.3E-60 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily VSVS12_03266 009ed526c15e4d52a53cf154b4f809ca 163 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 2 161 3.1E-45 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VSVS12_03266 009ed526c15e4d52a53cf154b4f809ca 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 1.7E-9 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VSVS12_03266 009ed526c15e4d52a53cf154b4f809ca 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 1.7E-9 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VSVS12_03266 009ed526c15e4d52a53cf154b4f809ca 163 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 1.7E-9 T 11-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 VSVS12_03266 009ed526c15e4d52a53cf154b4f809ca 163 PIRSF PIRSF001467 1 162 2.1E-24 T 11-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 VSVS12_03266 009ed526c15e4d52a53cf154b4f809ca 163 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 11-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 VSVS12_03125 c2748457e32cd8ac2c9eae292608cbea 190 Pfam PF13505 Outer membrane protein beta-barrel domain 9 177 5.8E-16 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel VSVS12_03125 c2748457e32cd8ac2c9eae292608cbea 190 SUPERFAMILY SSF56925 16 190 1.41E-20 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VSVS12_03125 c2748457e32cd8ac2c9eae292608cbea 190 Gene3D G3DSA:2.40.160.20 17 190 8.0E-21 T 11-10-2018 VSVS12_00450 3a2ec7a51aa8fc733987505e7a525580 339 Gene3D G3DSA:3.40.630.30 1 274 1.1E-114 T 11-10-2018 VSVS12_00450 3a2ec7a51aa8fc733987505e7a525580 339 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 339 2.5E-132 T 11-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 VSVS12_00450 3a2ec7a51aa8fc733987505e7a525580 339 SUPERFAMILY SSF55729 1 339 6.74E-132 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_00450 3a2ec7a51aa8fc733987505e7a525580 339 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 337 3.3E-140 T 11-10-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 VSVS12_00450 3a2ec7a51aa8fc733987505e7a525580 339 Gene3D G3DSA:2.40.40.20 278 339 1.3E-7 T 11-10-2018 VSVS12_00450 3a2ec7a51aa8fc733987505e7a525580 339 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 339 5.0E-133 T 11-10-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 VSVS12_03785 c794720b970f550dd6ea494e0706d7e2 95 SUPERFAMILY SSF143011 1 83 2.62E-23 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily VSVS12_03785 c794720b970f550dd6ea494e0706d7e2 95 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 5 84 6.0E-14 T 11-10-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family VSVS12_03785 c794720b970f550dd6ea494e0706d7e2 95 Gene3D G3DSA:3.30.2310.20 1 94 3.8E-28 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily VSVS12_02030 8cb58f583ffee27229a49ff4edc2aac0 380 SUPERFAMILY SSF53850 32 378 3.14E-41 T 11-10-2018 VSVS12_02030 8cb58f583ffee27229a49ff4edc2aac0 380 Gene3D G3DSA:3.40.190.10 31 130 2.9E-5 T 11-10-2018 VSVS12_02030 8cb58f583ffee27229a49ff4edc2aac0 380 Gene3D G3DSA:3.40.190.10 156 330 5.9E-13 T 11-10-2018 VSVS12_02030 8cb58f583ffee27229a49ff4edc2aac0 380 Pfam PF13416 Bacterial extracellular solute-binding protein 53 329 6.2E-24 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein VSVS12_02030 8cb58f583ffee27229a49ff4edc2aac0 380 PIRSF PIRSF029172 1 380 5.0E-172 T 11-10-2018 IPR027020 Protein ynjB VSVS12_02225 32ba69a425675924412fbd57d8c4cf48 89 Pfam PF04304 Protein of unknown function (DUF454) 1 77 2.4E-19 T 11-10-2018 IPR007401 Protein of unknown function DUF454 VSVS12_02106 2a5d4d61b2ddbcd282c27ded340c81c3 297 Gene3D G3DSA:3.40.50.1100 13 282 1.6E-21 T 11-10-2018 VSVS12_02106 2a5d4d61b2ddbcd282c27ded340c81c3 297 PIRSF PIRSF006278 2 294 1.1E-20 T 11-10-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase VSVS12_02106 2a5d4d61b2ddbcd282c27ded340c81c3 297 SUPERFAMILY SSF53686 6 293 8.45E-51 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VSVS12_02106 2a5d4d61b2ddbcd282c27ded340c81c3 297 Gene3D G3DSA:3.40.50.1100 33 135 1.6E-21 T 11-10-2018 VSVS12_02668 d6e9468867ab031dd73dd125750b2721 409 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 1.7E-53 T 11-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 VSVS12_02668 d6e9468867ab031dd73dd125750b2721 409 Gene3D G3DSA:3.30.70.260 328 408 1.7E-33 T 11-10-2018 VSVS12_02668 d6e9468867ab031dd73dd125750b2721 409 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 13 326 1.3E-36 T 11-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 VSVS12_02668 d6e9468867ab031dd73dd125750b2721 409 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VSVS12_02668 d6e9468867ab031dd73dd125750b2721 409 Gene3D G3DSA:3.40.50.720 14 312 6.3E-109 T 11-10-2018 VSVS12_02668 d6e9468867ab031dd73dd125750b2721 409 SUPERFAMILY SSF52283 7 136 7.87E-48 T 11-10-2018 VSVS12_02668 d6e9468867ab031dd73dd125750b2721 409 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 11-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site VSVS12_02668 d6e9468867ab031dd73dd125750b2721 409 SUPERFAMILY SSF51735 108 295 1.65E-58 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_02668 d6e9468867ab031dd73dd125750b2721 409 Gene3D G3DSA:3.40.50.720 109 297 6.3E-109 T 11-10-2018 VSVS12_02668 d6e9468867ab031dd73dd125750b2721 409 SUPERFAMILY SSF55021 334 408 4.58E-18 T 11-10-2018 VSVS12_02668 d6e9468867ab031dd73dd125750b2721 409 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 11-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 VSVS12_00545 d63a0af5357e8af04f7df11c55850f7c 321 Gene3D G3DSA:1.20.1420.30 35 309 1.6E-86 T 11-10-2018 VSVS12_00545 d63a0af5357e8af04f7df11c55850f7c 321 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 3 311 3.9E-82 T 11-10-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 VSVS12_00545 d63a0af5357e8af04f7df11c55850f7c 321 Pfam PF01699 Sodium/calcium exchanger protein 175 313 1.7E-27 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 VSVS12_00545 d63a0af5357e8af04f7df11c55850f7c 321 Pfam PF01699 Sodium/calcium exchanger protein 5 143 1.3E-27 T 11-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 VSVS12_00545 d63a0af5357e8af04f7df11c55850f7c 321 Gene3D G3DSA:1.20.58.1130 8 206 1.6E-86 T 11-10-2018 VSVS12_01641 dc631b7ee4f290d47636cdbdc1884496 1584 Pfam PF08548 Peptidase M10 serralysin C terminal 1464 1554 1.1E-6 T 11-10-2018 IPR013858 Peptidase M10 serralysin, C-terminal GO:0005509|GO:0005615 VSVS12_01641 dc631b7ee4f290d47636cdbdc1884496 1584 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1444 1462 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VSVS12_01641 dc631b7ee4f290d47636cdbdc1884496 1584 Gene3D G3DSA:2.150.10.10 1397 1559 7.3E-23 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_01641 dc631b7ee4f290d47636cdbdc1884496 1584 SUPERFAMILY SSF141072 909 1026 2.62E-6 T 11-10-2018 IPR038081 CalX-like domain superfamily VSVS12_01641 dc631b7ee4f290d47636cdbdc1884496 1584 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 1496 1555 2.0E-4 T 11-10-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass VSVS12_01641 dc631b7ee4f290d47636cdbdc1884496 1584 SUPERFAMILY SSF51120 1408 1561 3.66E-24 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_01641 dc631b7ee4f290d47636cdbdc1884496 1584 ProSitePatterns PS00330 Hemolysin-type calcium-binding region signature. 1453 1471 - T 11-10-2018 IPR018511 Hemolysin-type calcium-binding conserved site VSVS12_02837 5ad05dcc7c94bc509c09c0305a6540e5 298 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 4 295 3.5E-107 T 11-10-2018 IPR017685 HTH-type transcriptional regulator ArgP VSVS12_02837 5ad05dcc7c94bc509c09c0305a6540e5 298 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 298 51.983 T 11-10-2018 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria VSVS12_02837 5ad05dcc7c94bc509c09c0305a6540e5 298 Gene3D G3DSA:3.40.190.290 89 296 5.2E-66 T 11-10-2018 VSVS12_02837 5ad05dcc7c94bc509c09c0305a6540e5 298 Pfam PF03466 LysR substrate binding domain 99 286 4.0E-13 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_02837 5ad05dcc7c94bc509c09c0305a6540e5 298 Gene3D G3DSA:1.10.10.10 2 85 2.4E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_02837 5ad05dcc7c94bc509c09c0305a6540e5 298 SUPERFAMILY SSF46785 4 110 9.53E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_02837 5ad05dcc7c94bc509c09c0305a6540e5 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 3.5E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_02837 5ad05dcc7c94bc509c09c0305a6540e5 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 3.5E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_02837 5ad05dcc7c94bc509c09c0305a6540e5 298 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 3.5E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_02837 5ad05dcc7c94bc509c09c0305a6540e5 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 63 2.4E-14 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_02837 5ad05dcc7c94bc509c09c0305a6540e5 298 SUPERFAMILY SSF53850 95 293 1.81E-19 T 11-10-2018 VSVS12_00074 0390b39b4bd198f6b5903568ea8a12c8 724 Pfam PF13361 UvrD-like helicase C-terminal domain 278 617 7.6E-79 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VSVS12_00074 0390b39b4bd198f6b5903568ea8a12c8 724 Gene3D G3DSA:1.10.10.160 115 188 2.5E-98 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily VSVS12_00074 0390b39b4bd198f6b5903568ea8a12c8 724 Gene3D G3DSA:3.40.50.300 282 637 5.2E-132 T 11-10-2018 VSVS12_00074 0390b39b4bd198f6b5903568ea8a12c8 724 Gene3D G3DSA:1.10.486.10 383 539 5.2E-132 T 11-10-2018 VSVS12_00074 0390b39b4bd198f6b5903568ea8a12c8 724 Gene3D G3DSA:3.40.50.300 11 274 2.5E-98 T 11-10-2018 VSVS12_00074 0390b39b4bd198f6b5903568ea8a12c8 724 TIGRFAM TIGR01075 uvrD: DNA helicase II 7 722 0.0 T 11-10-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 VSVS12_00074 0390b39b4bd198f6b5903568ea8a12c8 724 SUPERFAMILY SSF52540 8 643 7.98E-179 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00074 0390b39b4bd198f6b5903568ea8a12c8 724 Pfam PF00580 UvrD/REP helicase N-terminal domain 11 272 2.6E-75 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 VSVS12_01297 e7dc43ef9e7388795fde67306e60bb45 106 Gene3D G3DSA:1.10.3340.10 4 106 2.0E-45 T 11-10-2018 IPR036810 SMc04008-like superfamily VSVS12_01297 e7dc43ef9e7388795fde67306e60bb45 106 Pfam PF06844 Protein of unknown function (DUF1244) 35 101 3.1E-35 T 11-10-2018 IPR023163 SMc04008-like domain VSVS12_01297 e7dc43ef9e7388795fde67306e60bb45 106 SUPERFAMILY SSF158757 8 85 1.44E-36 T 11-10-2018 IPR036810 SMc04008-like superfamily VSVS12_00482 52af0903a6d8cdc04131b74fcc8c6bca 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 19.727 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00482 52af0903a6d8cdc04131b74fcc8c6bca 104 Gene3D G3DSA:2.30.30.30 2 104 2.1E-39 T 11-10-2018 IPR014722 Ribosomal protein L2, domain 2 VSVS12_00482 52af0903a6d8cdc04131b74fcc8c6bca 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 103 3.1E-22 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00482 52af0903a6d8cdc04131b74fcc8c6bca 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 5.3E-40 T 11-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00482 52af0903a6d8cdc04131b74fcc8c6bca 104 SUPERFAMILY SSF50104 4 101 2.52E-33 T 11-10-2018 IPR008991 Translation protein SH3-like domain superfamily VSVS12_00482 52af0903a6d8cdc04131b74fcc8c6bca 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 11-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00482 52af0903a6d8cdc04131b74fcc8c6bca 104 SMART SM00739 4 31 3.4E-4 T 11-10-2018 IPR005824 KOW VSVS12_00482 52af0903a6d8cdc04131b74fcc8c6bca 104 Pfam PF00467 KOW motif 8 37 1.3E-5 T 11-10-2018 IPR005824 KOW VSVS12_00536 3cd90813becaa957488292e18a57a796 287 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 283 40.744 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 VSVS12_00536 3cd90813becaa957488292e18a57a796 287 PIRSF PIRSF005052 1 286 7.1E-109 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 VSVS12_00536 3cd90813becaa957488292e18a57a796 287 Gene3D G3DSA:3.40.50.300 1 168 3.7E-6 T 11-10-2018 VSVS12_00536 3cd90813becaa957488292e18a57a796 287 SUPERFAMILY SSF52540 1 156 1.13E-12 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00536 3cd90813becaa957488292e18a57a796 287 Pfam PF03668 P-loop ATPase protein family 1 284 1.1E-113 T 11-10-2018 IPR005337 RapZ-like family GO:0005524 VSVS12_01205 a9b5f4b9d21085dabf4251af2a9409e3 311 Pfam PF02653 Branched-chain amino acid transport system / permease component 8 265 4.5E-26 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VSVS12_01932 9def20c5bcd1ca4b4c2810430b940489 510 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 271 278 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VSVS12_01932 9def20c5bcd1ca4b4c2810430b940489 510 Pfam PF00171 Aldehyde dehydrogenase family 39 497 2.6E-152 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VSVS12_01932 9def20c5bcd1ca4b4c2810430b940489 510 Gene3D G3DSA:3.40.605.10 38 493 4.8E-163 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VSVS12_01932 9def20c5bcd1ca4b4c2810430b940489 510 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 299 310 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VSVS12_01932 9def20c5bcd1ca4b4c2810430b940489 510 SUPERFAMILY SSF53720 22 504 6.28E-155 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VSVS12_01932 9def20c5bcd1ca4b4c2810430b940489 510 Gene3D G3DSA:3.40.309.10 278 471 4.8E-163 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VSVS12_00682 57f9b8a2ed6a340168856244a052d9aa 296 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 3 288 40.411 T 11-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 VSVS12_00682 57f9b8a2ed6a340168856244a052d9aa 296 Gene3D G3DSA:3.40.50.620 3 282 1.2E-106 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VSVS12_00682 57f9b8a2ed6a340168856244a052d9aa 296 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 6 259 9.6E-44 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 VSVS12_00682 57f9b8a2ed6a340168856244a052d9aa 296 SUPERFAMILY SSF52374 3 283 1.04E-86 T 11-10-2018 VSVS12_00682 57f9b8a2ed6a340168856244a052d9aa 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 8.2E-14 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VSVS12_00682 57f9b8a2ed6a340168856244a052d9aa 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 184 192 8.2E-14 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VSVS12_00682 57f9b8a2ed6a340168856244a052d9aa 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 8.2E-14 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VSVS12_00682 57f9b8a2ed6a340168856244a052d9aa 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 8.2E-14 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VSVS12_00682 57f9b8a2ed6a340168856244a052d9aa 296 PRINTS PR00987 Glutamyl-tRNA synthetase signature 168 178 8.2E-14 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VSVS12_00682 57f9b8a2ed6a340168856244a052d9aa 296 Gene3D G3DSA:3.40.50.620 78 216 1.2E-106 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VSVS12_00682 57f9b8a2ed6a340168856244a052d9aa 296 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 3 268 9.2E-114 T 11-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 VSVS12_03015 890c1d8f034828b6b920c659ef286bed 128 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 1 116 8.0E-51 T 11-10-2018 IPR009867 Protein of unknown function DUF1422 VSVS12_03015 890c1d8f034828b6b920c659ef286bed 128 Pfam PF07226 Protein of unknown function (DUF1422) 11 120 6.9E-49 T 11-10-2018 IPR009867 Protein of unknown function DUF1422 VSVS12_04124 603a7d5b0a3ff30407ace90c505e2cad 294 Pfam PF16966 Porin-like glycoporin RafY 6 294 9.7E-88 T 11-10-2018 IPR016963 Glycoporin RafY VSVS12_04124 603a7d5b0a3ff30407ace90c505e2cad 294 SUPERFAMILY SSF56935 13 294 1.59E-9 T 11-10-2018 VSVS12_01049 26b41367d464c7c788350b2ca5d49e46 145 Pfam PF10952 Protein of unknown function (DUF2753) 6 145 1.1E-73 T 11-10-2018 IPR020206 Uncharacterised protein family, VP2110 VSVS12_01049 26b41367d464c7c788350b2ca5d49e46 145 ProDom PD087558 YRN2_VIBPA ORF2 VV1184 VV13101 MOTY 3'REGION VC1009 VP2110 3 144 2.0E-59 T 11-10-2018 IPR020206 Uncharacterised protein family, VP2110 VSVS12_04574 bd47c294ffe1291f15719c5f53777b29 94 Gene3D G3DSA:3.40.225.10 1 93 8.8E-13 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily VSVS12_04574 bd47c294ffe1291f15719c5f53777b29 94 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 12 60 2.1E-6 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal VSVS12_04574 bd47c294ffe1291f15719c5f53777b29 94 SUPERFAMILY SSF53639 4 83 1.96E-13 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily VSVS12_00442 97a1f7e5534cb5b587b04888785ea874 367 PIRSF PIRSF001455 26 363 2.1E-110 T 11-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 VSVS12_00442 97a1f7e5534cb5b587b04888785ea874 367 Gene3D G3DSA:1.20.1090.10 178 366 1.8E-71 T 11-10-2018 VSVS12_00442 97a1f7e5534cb5b587b04888785ea874 367 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 32 359 4.9E-123 T 11-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 VSVS12_00442 97a1f7e5534cb5b587b04888785ea874 367 SUPERFAMILY SSF56796 4 361 2.49E-115 T 11-10-2018 VSVS12_00442 97a1f7e5534cb5b587b04888785ea874 367 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 361 74.419 T 11-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 VSVS12_00442 97a1f7e5534cb5b587b04888785ea874 367 Pfam PF01761 3-dehydroquinate synthase 73 330 8.2E-113 T 11-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 VSVS12_00442 97a1f7e5534cb5b587b04888785ea874 367 Gene3D G3DSA:3.40.50.1970 1 177 3.8E-64 T 11-10-2018 VSVS12_00202 068954dc88a24ee5bf4a4cc581aa4a97 107 Pfam PF00825 Ribonuclease P 1 101 1.0E-30 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VSVS12_00202 068954dc88a24ee5bf4a4cc581aa4a97 107 Gene3D G3DSA:3.30.230.10 1 107 7.3E-38 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VSVS12_00202 068954dc88a24ee5bf4a4cc581aa4a97 107 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 5 93 6.0E-44 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VSVS12_00202 068954dc88a24ee5bf4a4cc581aa4a97 107 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 104 12.956 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VSVS12_00202 068954dc88a24ee5bf4a4cc581aa4a97 107 SUPERFAMILY SSF54211 1 103 5.31E-29 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VSVS12_00202 068954dc88a24ee5bf4a4cc581aa4a97 107 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 6 103 2.7E-27 T 11-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 VSVS12_03013 9aa1f9b52dffb6f4630c7eddcc98eb93 606 Gene3D G3DSA:2.170.130.10 23 151 5.8E-37 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VSVS12_03013 9aa1f9b52dffb6f4630c7eddcc98eb93 606 SUPERFAMILY SSF56935 28 606 1.96E-110 T 11-10-2018 VSVS12_03013 9aa1f9b52dffb6f4630c7eddcc98eb93 606 Gene3D G3DSA:2.40.170.20 154 606 1.7E-111 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VSVS12_03013 9aa1f9b52dffb6f4630c7eddcc98eb93 606 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 2 606 33.253 T 11-10-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0015420|GO:0015889|GO:0016020 VSVS12_03013 9aa1f9b52dffb6f4630c7eddcc98eb93 606 Pfam PF00593 TonB dependent receptor 180 599 2.0E-41 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VSVS12_03013 9aa1f9b52dffb6f4630c7eddcc98eb93 606 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 35 - T 11-10-2018 IPR010916 TonB box, conserved site VSVS12_03013 9aa1f9b52dffb6f4630c7eddcc98eb93 606 Pfam PF07715 TonB-dependent Receptor Plug Domain 42 146 8.8E-29 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain VSVS12_00311 f0ef15d12e1eceb8fccdb3c01c2f8be5 275 Gene3D G3DSA:3.40.190.80 160 264 2.0E-25 T 11-10-2018 VSVS12_00311 f0ef15d12e1eceb8fccdb3c01c2f8be5 275 Pfam PF00459 Inositol monophosphatase family 8 252 6.4E-50 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VSVS12_00311 f0ef15d12e1eceb8fccdb3c01c2f8be5 275 Hamap MF_02095 3'(2'),5'-bisphosphate nucleotidase CysQ [cysQ]. 10 262 39.235 T 11-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 VSVS12_00311 f0ef15d12e1eceb8fccdb3c01c2f8be5 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 65 81 3.4E-6 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VSVS12_00311 f0ef15d12e1eceb8fccdb3c01c2f8be5 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 89 105 3.4E-6 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VSVS12_00311 f0ef15d12e1eceb8fccdb3c01c2f8be5 275 PRINTS PR00377 Inositol monophosphatase superfamily signature 43 63 3.4E-6 T 11-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 VSVS12_00311 f0ef15d12e1eceb8fccdb3c01c2f8be5 275 SUPERFAMILY SSF56655 6 266 8.51E-78 T 11-10-2018 VSVS12_00311 f0ef15d12e1eceb8fccdb3c01c2f8be5 275 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 11 260 2.8E-105 T 11-10-2018 IPR006240 3'(2'),5'-bisphosphate nucleotidase CysQ GO:0000287|GO:0006790|GO:0008441 KEGG: 00920+3.1.3.7 VSVS12_00311 f0ef15d12e1eceb8fccdb3c01c2f8be5 275 Gene3D G3DSA:3.30.540.10 6 159 1.8E-46 T 11-10-2018 VSVS12_01774 c2adf8e6c57a4f5114b940f4cf868c56 404 SUPERFAMILY SSF53756 6 369 1.22E-64 T 11-10-2018 VSVS12_01774 c2adf8e6c57a4f5114b940f4cf868c56 404 Gene3D G3DSA:3.40.50.2000 68 367 1.3E-53 T 11-10-2018 VSVS12_01774 c2adf8e6c57a4f5114b940f4cf868c56 404 Gene3D G3DSA:3.40.50.2000 172 354 1.3E-53 T 11-10-2018 VSVS12_01774 c2adf8e6c57a4f5114b940f4cf868c56 404 Pfam PF00534 Glycosyl transferases group 1 185 320 3.0E-28 T 11-10-2018 IPR001296 Glycosyl transferase, family 1 VSVS12_01774 c2adf8e6c57a4f5114b940f4cf868c56 404 Pfam PF13439 Glycosyltransferase Family 4 18 174 8.1E-14 T 11-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 VSVS12_02098 edc168b711cae27fcb41134c3eecf6b6 400 Gene3D G3DSA:3.40.50.720 1 398 1.1E-179 T 11-10-2018 VSVS12_02098 edc168b711cae27fcb41134c3eecf6b6 400 Pfam PF07055 Enoyl reductase FAD binding domain 326 389 6.9E-30 T 11-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VSVS12_02098 edc168b711cae27fcb41134c3eecf6b6 400 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 395 56.994 T 11-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VSVS12_02098 edc168b711cae27fcb41134c3eecf6b6 400 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 80 3.1E-37 T 11-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VSVS12_02098 edc168b711cae27fcb41134c3eecf6b6 400 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 82 317 6.0E-113 T 11-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VSVS12_03989 1cbdd4d67ebffc14e25a3888fda211b9 786 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 649 752 2.9E-10 T 11-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 VSVS12_03989 1cbdd4d67ebffc14e25a3888fda211b9 786 Pfam PF13654 AAA domain 25 539 2.3E-181 T 11-10-2018 VSVS12_03989 1cbdd4d67ebffc14e25a3888fda211b9 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 676 695 1.4E-7 T 11-10-2018 VSVS12_03989 1cbdd4d67ebffc14e25a3888fda211b9 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 646 665 1.4E-7 T 11-10-2018 VSVS12_03989 1cbdd4d67ebffc14e25a3888fda211b9 786 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 706 724 1.4E-7 T 11-10-2018 VSVS12_03989 1cbdd4d67ebffc14e25a3888fda211b9 786 Gene3D G3DSA:3.30.230.10 540 767 3.7E-90 T 11-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup VSVS12_03989 1cbdd4d67ebffc14e25a3888fda211b9 786 Gene3D G3DSA:1.10.8.60 449 536 1.7E-13 T 11-10-2018 VSVS12_03989 1cbdd4d67ebffc14e25a3888fda211b9 786 Gene3D G3DSA:3.40.50.300 5 179 9.4E-28 T 11-10-2018 VSVS12_03989 1cbdd4d67ebffc14e25a3888fda211b9 786 Gene3D G3DSA:3.40.50.300 246 448 1.5E-55 T 11-10-2018 VSVS12_03989 1cbdd4d67ebffc14e25a3888fda211b9 786 SUPERFAMILY SSF52540 30 538 3.36E-10 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03989 1cbdd4d67ebffc14e25a3888fda211b9 786 SUPERFAMILY SSF54211 564 756 8.72E-35 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VSVS12_04228 3a30033cb19ba9810c5218c933c75e22 546 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 50 492 3.8E-151 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_04228 3a30033cb19ba9810c5218c933c75e22 546 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 42 544 1.1E-214 T 11-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 VSVS12_04228 3a30033cb19ba9810c5218c933c75e22 546 Gene3D G3DSA:1.20.210.10 27 546 5.6E-220 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_04228 3a30033cb19ba9810c5218c933c75e22 546 SUPERFAMILY SSF81442 39 545 1.44E-194 T 11-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_04228 3a30033cb19ba9810c5218c933c75e22 546 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 270 324 - T 11-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_04228 3a30033cb19ba9810c5218c933c75e22 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 373 391 1.4E-122 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_04228 3a30033cb19ba9810c5218c933c75e22 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 401 420 1.4E-122 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_04228 3a30033cb19ba9810c5218c933c75e22 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 41 66 1.4E-122 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_04228 3a30033cb19ba9810c5218c933c75e22 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 314 329 1.4E-122 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_04228 3a30033cb19ba9810c5218c933c75e22 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 88 111 1.4E-122 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_04228 3a30033cb19ba9810c5218c933c75e22 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 158 170 1.4E-122 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_04228 3a30033cb19ba9810c5218c933c75e22 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 217 236 1.4E-122 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_04228 3a30033cb19ba9810c5218c933c75e22 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 338 359 1.4E-122 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_04228 3a30033cb19ba9810c5218c933c75e22 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 188 206 1.4E-122 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_04228 3a30033cb19ba9810c5218c933c75e22 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 268 289 1.4E-122 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_04228 3a30033cb19ba9810c5218c933c75e22 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 451 472 1.4E-122 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_04228 3a30033cb19ba9810c5218c933c75e22 546 PRINTS PR01165 Cytochrome c oxidase subunit I signature 115 139 1.4E-122 T 11-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_02394 8966e1f6a44126d2501ee166ac388a1d 346 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 8 345 47.613 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VSVS12_02394 8966e1f6a44126d2501ee166ac388a1d 346 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 8 334 7.3E-151 T 11-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 VSVS12_02394 8966e1f6a44126d2501ee166ac388a1d 346 Pfam PF00586 AIR synthase related protein, N-terminal domain 60 165 5.2E-15 T 11-10-2018 IPR016188 PurM-like, N-terminal domain VSVS12_02394 8966e1f6a44126d2501ee166ac388a1d 346 Gene3D G3DSA:3.30.1330.10 7 171 1.7E-69 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VSVS12_02394 8966e1f6a44126d2501ee166ac388a1d 346 Pfam PF02769 AIR synthase related protein, C-terminal domain 178 340 9.3E-40 T 11-10-2018 IPR010918 PurM-like, C-terminal domain VSVS12_02394 8966e1f6a44126d2501ee166ac388a1d 346 SUPERFAMILY SSF56042 172 342 1.94E-62 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VSVS12_02394 8966e1f6a44126d2501ee166ac388a1d 346 SUPERFAMILY SSF55326 8 171 1.36E-53 T 11-10-2018 IPR036921 PurM-like, N-terminal domain superfamily VSVS12_02394 8966e1f6a44126d2501ee166ac388a1d 346 Gene3D G3DSA:3.90.650.10 172 346 7.6E-73 T 11-10-2018 IPR036676 PurM-like, C-terminal domain superfamily VSVS12_00133 3d5b1a5f5f0cce3eae6b818d4b65548d 458 Pfam PF02447 GntP family permease 13 456 2.9E-116 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 VSVS12_00133 3d5b1a5f5f0cce3eae6b818d4b65548d 458 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 14 457 1.7E-104 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 VSVS12_00133 3d5b1a5f5f0cce3eae6b818d4b65548d 458 PIRSF PIRSF002746 8 458 3.1E-143 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 VSVS12_03231 0fc3108210118955b33ba60208501166 376 Pfam PF04865 Baseplate J-like protein 77 332 8.8E-46 T 11-10-2018 IPR006949 Baseplate protein J-like VSVS12_03231 0fc3108210118955b33ba60208501166 376 PIRSF PIRSF020481 2 373 2.4E-48 T 11-10-2018 IPR014507 Baseplate assembly protein J, predicted VSVS12_02664 37b65e3c9c7d2ff6294ab0001cf3045a 192 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 12 176 2.7E-12 T 11-10-2018 IPR011978 Uncharacterised protein family UPF0149 VSVS12_02664 37b65e3c9c7d2ff6294ab0001cf3045a 192 Pfam PF03695 Uncharacterised protein family (UPF0149) 13 179 5.4E-37 T 11-10-2018 IPR011978 Uncharacterised protein family UPF0149 VSVS12_02664 37b65e3c9c7d2ff6294ab0001cf3045a 192 SUPERFAMILY SSF101327 7 178 5.1E-45 T 11-10-2018 IPR036255 YgfB-like superfamily VSVS12_02664 37b65e3c9c7d2ff6294ab0001cf3045a 192 Gene3D G3DSA:1.20.120.740 4 192 8.3E-50 T 11-10-2018 VSVS12_02664 37b65e3c9c7d2ff6294ab0001cf3045a 192 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 5 190 33.015 T 11-10-2018 IPR011978 Uncharacterised protein family UPF0149 VSVS12_01457 1bdd1fc17517a221b1bfce866a158226 451 Pfam PF02378 Phosphotransferase system, EIIC 115 389 2.4E-27 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VSVS12_01457 1bdd1fc17517a221b1bfce866a158226 451 Pfam PF00367 phosphotransferase system, EIIB 17 46 3.3E-11 T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VSVS12_01457 1bdd1fc17517a221b1bfce866a158226 451 SUPERFAMILY SSF55604 12 83 5.89E-16 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VSVS12_01457 1bdd1fc17517a221b1bfce866a158226 451 Gene3D G3DSA:3.30.1360.60 4 82 3.6E-19 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VSVS12_01457 1bdd1fc17517a221b1bfce866a158226 451 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 24 41 - T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VSVS12_03569 aab253807e764e428d178f7552977f63 439 Pfam PF11329 Protein of unknown function (DUF3131) 64 431 3.2E-148 T 11-10-2018 IPR021478 Protein of unknown function DUF3131 VSVS12_01675 a5aed3c3f1285685bca0a0d3f6e2d9fa 546 Pfam PF11949 Protein of unknown function (DUF3466) 231 546 1.7E-43 T 11-10-2018 IPR022562 Protein of unknown function DUF3466 VSVS12_01675 a5aed3c3f1285685bca0a0d3f6e2d9fa 546 TIGRFAM TIGR03501 GlyGly_CTERM: GlyGly-CTERM domain 526 546 0.0015 T 11-10-2018 IPR020008 GlyGly-CTERM domain VSVS12_02156 2f90d467fabd5bfc59ba88b059a5f1e9 96 TIGRFAM TIGR02972 TMAO_torE: trimethylamine N-oxide reductase system, TorE protein 46 94 1.7E-25 T 11-10-2018 IPR014316 Trimethylamine N-oxide reductase system, TorE VSVS12_02156 2f90d467fabd5bfc59ba88b059a5f1e9 96 Pfam PF06796 Periplasmic nitrate reductase protein NapE 44 92 9.7E-22 T 11-10-2018 IPR010649 Nitrate/trimethylamine N-oxide reductase NapE/TorE VSVS12_00685 83f0d75abcb785355afa79ffec47d52a 848 SUPERFAMILY SSF52540 43 465 1.93E-49 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00685 83f0d75abcb785355afa79ffec47d52a 848 SMART SM00847 410 504 2.1E-6 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 VSVS12_00685 83f0d75abcb785355afa79ffec47d52a 848 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 24 845 0.0 T 11-10-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 VSVS12_00685 83f0d75abcb785355afa79ffec47d52a 848 PIRSF PIRSF005496 20 847 0.0 T 11-10-2018 VSVS12_00685 83f0d75abcb785355afa79ffec47d52a 848 Pfam PF08482 ATP-dependent helicase C-terminal 701 833 5.5E-50 T 11-10-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal VSVS12_00685 83f0d75abcb785355afa79ffec47d52a 848 SMART SM00487 17 206 1.1E-13 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VSVS12_00685 83f0d75abcb785355afa79ffec47d52a 848 Pfam PF00270 DEAD/DEAH box helicase 30 183 7.9E-9 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VSVS12_00685 83f0d75abcb785355afa79ffec47d52a 848 Pfam PF04408 Helicase associated domain (HA2) 411 477 1.4E-8 T 11-10-2018 IPR007502 Helicase-associated domain GO:0004386 VSVS12_00685 83f0d75abcb785355afa79ffec47d52a 848 Gene3D G3DSA:3.40.50.300 19 199 1.7E-52 T 11-10-2018 VSVS12_00685 83f0d75abcb785355afa79ffec47d52a 848 SMART SM00490 246 350 5.0E-17 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_00685 83f0d75abcb785355afa79ffec47d52a 848 Pfam PF00271 Helicase conserved C-terminal domain 228 349 9.3E-13 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_00685 83f0d75abcb785355afa79ffec47d52a 848 Gene3D G3DSA:1.20.120.1080 396 502 1.3E-8 T 11-10-2018 VSVS12_00685 83f0d75abcb785355afa79ffec47d52a 848 Gene3D G3DSA:3.40.50.300 200 367 1.2E-52 T 11-10-2018 VSVS12_03778 a499c20ca2d4502527114ed5dec79577 812 Pfam PF02687 FtsX-like permease family 720 798 5.3E-6 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VSVS12_02990 bf8db0fb3c54ab9208de3d339ea157e2 90 Gene3D G3DSA:4.10.520.10 1 90 1.5E-37 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VSVS12_02990 bf8db0fb3c54ab9208de3d339ea157e2 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 11-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 VSVS12_02990 bf8db0fb3c54ab9208de3d339ea157e2 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.1E-19 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VSVS12_02990 bf8db0fb3c54ab9208de3d339ea157e2 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.1E-19 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VSVS12_02990 bf8db0fb3c54ab9208de3d339ea157e2 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.1E-19 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VSVS12_02990 bf8db0fb3c54ab9208de3d339ea157e2 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 2.4E-33 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VSVS12_02990 bf8db0fb3c54ab9208de3d339ea157e2 90 SUPERFAMILY SSF47729 1 90 3.97E-33 T 11-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 VSVS12_02990 bf8db0fb3c54ab9208de3d339ea157e2 90 SMART SM00411 1 90 1.2E-46 T 11-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 VSVS12_02756 a53985c4d4b8eb56ca621b57f5fbf500 65 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 62 17.001 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 VSVS12_02756 a53985c4d4b8eb56ca621b57f5fbf500 65 Pfam PF02599 Global regulator protein family 1 52 2.0E-26 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 VSVS12_02756 a53985c4d4b8eb56ca621b57f5fbf500 65 SUPERFAMILY SSF117130 1 54 6.93E-21 T 11-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 VSVS12_02756 a53985c4d4b8eb56ca621b57f5fbf500 65 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 59 2.8E-30 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 VSVS12_02756 a53985c4d4b8eb56ca621b57f5fbf500 65 Gene3D G3DSA:3.30.70.1680 1 59 6.6E-30 T 11-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 VSVS12_02756 a53985c4d4b8eb56ca621b57f5fbf500 65 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 3.0E-20 T 11-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 VSVS12_01573 8eded783c8ba3f5bb3e3d68dc5b48159 238 SUPERFAMILY SSF103039 21 184 1.57E-24 T 11-10-2018 IPR028976 CheC-like superfamily VSVS12_01573 8eded783c8ba3f5bb3e3d68dc5b48159 238 Gene3D G3DSA:3.40.1550.10 18 184 4.6E-21 T 11-10-2018 IPR028976 CheC-like superfamily VSVS12_01573 8eded783c8ba3f5bb3e3d68dc5b48159 238 Pfam PF11813 Protein of unknown function (DUF3334) 14 238 1.2E-116 T 11-10-2018 IPR024513 Protein of unknown function DUF3334 VSVS12_01528 958ffb004b50b887fdf03415d301bf80 299 SUPERFAMILY SSF46785 2 80 8.84E-13 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_01528 958ffb004b50b887fdf03415d301bf80 299 SUPERFAMILY SSF53850 94 282 1.03E-6 T 11-10-2018 VSVS12_01528 958ffb004b50b887fdf03415d301bf80 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 3.0E-10 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_01528 958ffb004b50b887fdf03415d301bf80 299 Gene3D G3DSA:1.10.10.10 1 83 1.3E-12 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_01528 958ffb004b50b887fdf03415d301bf80 299 Gene3D G3DSA:3.40.190.290 93 299 1.4E-6 T 11-10-2018 VSVS12_02832 36cba4f8579d1a83e38288551f0a0e81 240 ProSitePatterns PS00622 LuxR-type HTH domain signature. 194 221 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_02832 36cba4f8579d1a83e38288551f0a0e81 240 SUPERFAMILY SSF46894 167 240 4.08E-17 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VSVS12_02832 36cba4f8579d1a83e38288551f0a0e81 240 Gene3D G3DSA:1.10.10.10 175 240 1.0E-25 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_02832 36cba4f8579d1a83e38288551f0a0e81 240 SMART SM00421 177 234 1.0E-16 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_02832 36cba4f8579d1a83e38288551f0a0e81 240 Pfam PF00196 Bacterial regulatory proteins, luxR family 179 233 3.7E-17 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_02832 36cba4f8579d1a83e38288551f0a0e81 240 SUPERFAMILY SSF75516 10 165 1.19E-32 T 11-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily VSVS12_02832 36cba4f8579d1a83e38288551f0a0e81 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 194 210 1.9E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_02832 36cba4f8579d1a83e38288551f0a0e81 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 210 222 1.9E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_02832 36cba4f8579d1a83e38288551f0a0e81 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 194 1.9E-10 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_02832 36cba4f8579d1a83e38288551f0a0e81 240 Pfam PF03472 Autoinducer binding domain 23 160 3.4E-27 T 11-10-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain VSVS12_02832 36cba4f8579d1a83e38288551f0a0e81 240 Gene3D G3DSA:3.30.450.80 3 171 4.8E-43 T 11-10-2018 IPR036693 Transcription factor LuxR-like, autoinducer-binding domain superfamily VSVS12_04283 3ddf3d4eb9625dcc4c87509af5fa5a68 126 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 126 3.4E-51 T 11-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 VSVS12_04283 3ddf3d4eb9625dcc4c87509af5fa5a68 126 Pfam PF01597 Glycine cleavage H-protein 5 125 5.0E-50 T 11-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate VSVS12_04283 3ddf3d4eb9625dcc4c87509af5fa5a68 126 Gene3D G3DSA:2.40.50.100 1 126 1.1E-50 T 11-10-2018 VSVS12_04283 3ddf3d4eb9625dcc4c87509af5fa5a68 126 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 2 124 41.791 T 11-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 VSVS12_04283 3ddf3d4eb9625dcc4c87509af5fa5a68 126 SUPERFAMILY SSF51230 3 125 2.09E-44 T 11-10-2018 IPR011053 Single hybrid motif VSVS12_01931 e46134619a5e8be2d6cd10fe6c3937f8 170 SUPERFAMILY SSF54909 66 147 6.97E-17 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel VSVS12_01931 e46134619a5e8be2d6cd10fe6c3937f8 170 Gene3D G3DSA:1.10.10.10 4 54 1.6E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_01931 e46134619a5e8be2d6cd10fe6c3937f8 170 Pfam PF13412 Winged helix-turn-helix DNA-binding 3 50 2.7E-19 T 11-10-2018 VSVS12_01931 e46134619a5e8be2d6cd10fe6c3937f8 170 SMART SM00344 3 112 2.1E-35 T 11-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 VSVS12_01931 e46134619a5e8be2d6cd10fe6c3937f8 170 Gene3D G3DSA:3.30.70.920 59 140 6.8E-19 T 11-10-2018 VSVS12_01931 e46134619a5e8be2d6cd10fe6c3937f8 170 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 11-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site VSVS12_01931 e46134619a5e8be2d6cd10fe6c3937f8 170 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 2.0E-15 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VSVS12_01931 e46134619a5e8be2d6cd10fe6c3937f8 170 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 2.0E-15 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VSVS12_01931 e46134619a5e8be2d6cd10fe6c3937f8 170 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 2.0E-15 T 11-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 VSVS12_01931 e46134619a5e8be2d6cd10fe6c3937f8 170 Pfam PF01037 Lrp/AsnC ligand binding domain 69 142 2.7E-19 T 11-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain VSVS12_01931 e46134619a5e8be2d6cd10fe6c3937f8 170 SUPERFAMILY SSF46785 2 58 1.54E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_01143 c425ec31653c74f3b2aebc946f0ae994 116 Gene3D G3DSA:3.40.50.2300 12 116 1.8E-22 T 11-10-2018 VSVS12_01143 c425ec31653c74f3b2aebc946f0ae994 116 SUPERFAMILY SSF52794 13 108 4.71E-16 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VSVS12_01143 c425ec31653c74f3b2aebc946f0ae994 116 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 13 102 2.7E-6 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VSVS12_01858 3d86b17b26d563658054608f15815ab0 92 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 1 92 26.599 T 11-10-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 VSVS12_01858 3d86b17b26d563658054608f15815ab0 92 Gene3D G3DSA:2.40.240.10 1 92 4.1E-34 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VSVS12_01858 3d86b17b26d563658054608f15815ab0 92 SUPERFAMILY SSF50715 1 92 2.09E-28 T 11-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VSVS12_01858 3d86b17b26d563658054608f15815ab0 92 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 1 92 6.0E-45 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 VSVS12_01858 3d86b17b26d563658054608f15815ab0 92 Pfam PF01386 Ribosomal L25p family 4 89 2.5E-22 T 11-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 VSVS12_04127 c9d830b6303e500c85fbb4cc5aba057e 249 Gene3D G3DSA:3.40.50.300 4 246 1.1E-61 T 11-10-2018 VSVS12_04127 c9d830b6303e500c85fbb4cc5aba057e 249 SMART SM00382 28 220 2.7E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_04127 c9d830b6303e500c85fbb4cc5aba057e 249 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 4 249 4.9E-126 T 11-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 VSVS12_04127 c9d830b6303e500c85fbb4cc5aba057e 249 Pfam PF00005 ABC transporter 19 174 1.6E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_04127 c9d830b6303e500c85fbb4cc5aba057e 249 SUPERFAMILY SSF52540 4 235 6.37E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_04127 c9d830b6303e500c85fbb4cc5aba057e 249 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_01035 5cf2b7bf65dfa0656143f1ebca9d2499 502 Pfam PF00665 Integrase core domain 136 249 7.7E-10 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VSVS12_01035 5cf2b7bf65dfa0656143f1ebca9d2499 502 SUPERFAMILY SSF46689 382 482 4.66E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_01035 5cf2b7bf65dfa0656143f1ebca9d2499 502 SUPERFAMILY SSF53098 134 258 2.43E-15 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_01035 5cf2b7bf65dfa0656143f1ebca9d2499 502 SUPERFAMILY SSF46689 12 110 1.13E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_01035 5cf2b7bf65dfa0656143f1ebca9d2499 502 Gene3D G3DSA:3.30.420.10 151 309 3.9E-11 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VSVS12_01952 5cf2b7bf65dfa0656143f1ebca9d2499 502 Pfam PF00665 Integrase core domain 136 249 7.7E-10 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VSVS12_01952 5cf2b7bf65dfa0656143f1ebca9d2499 502 SUPERFAMILY SSF46689 382 482 4.66E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_01952 5cf2b7bf65dfa0656143f1ebca9d2499 502 SUPERFAMILY SSF53098 134 258 2.43E-15 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_01952 5cf2b7bf65dfa0656143f1ebca9d2499 502 SUPERFAMILY SSF46689 12 110 1.13E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_01952 5cf2b7bf65dfa0656143f1ebca9d2499 502 Gene3D G3DSA:3.30.420.10 151 309 3.9E-11 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VSVS12_03746 5cf2b7bf65dfa0656143f1ebca9d2499 502 Pfam PF00665 Integrase core domain 136 249 7.7E-10 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VSVS12_03746 5cf2b7bf65dfa0656143f1ebca9d2499 502 SUPERFAMILY SSF46689 382 482 4.66E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_03746 5cf2b7bf65dfa0656143f1ebca9d2499 502 SUPERFAMILY SSF53098 134 258 2.43E-15 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_03746 5cf2b7bf65dfa0656143f1ebca9d2499 502 SUPERFAMILY SSF46689 12 110 1.13E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_03746 5cf2b7bf65dfa0656143f1ebca9d2499 502 Gene3D G3DSA:3.30.420.10 151 309 3.9E-11 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VSVS12_02481 3a44a434e95cf93b8c28f6855f9ec85e 466 Gene3D G3DSA:2.40.30.10 367 453 2.8E-8 T 11-10-2018 VSVS12_02481 3a44a434e95cf93b8c28f6855f9ec85e 466 Pfam PF01136 Peptidase family U32 80 355 5.7E-96 T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 VSVS12_02481 3a44a434e95cf93b8c28f6855f9ec85e 466 Pfam PF16325 Peptidase family U32 C-terminal domain 372 452 6.4E-21 T 11-10-2018 IPR032525 Peptidase family U32, C-terminal VSVS12_02481 3a44a434e95cf93b8c28f6855f9ec85e 466 ProSitePatterns PS01276 Peptidase family U32 signature. 167 185 - T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 VSVS12_01718 c427efb63dbf60a0a88fd9765a941876 292 Pfam PF00924 Mechanosensitive ion channel 86 283 3.9E-35 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VSVS12_01718 c427efb63dbf60a0a88fd9765a941876 292 SUPERFAMILY SSF50182 125 187 7.19E-15 T 11-10-2018 IPR010920 LSM domain superfamily VSVS12_01718 c427efb63dbf60a0a88fd9765a941876 292 SUPERFAMILY SSF82689 197 285 1.96E-6 T 11-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 VSVS12_01718 c427efb63dbf60a0a88fd9765a941876 292 Gene3D G3DSA:3.30.70.100 195 286 1.3E-5 T 11-10-2018 VSVS12_01718 c427efb63dbf60a0a88fd9765a941876 292 Gene3D G3DSA:2.30.30.60 140 191 1.7E-8 T 11-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily VSVS12_01722 d1f1b1f0cd5b7dbbd85167265ffda91c 273 Gene3D G3DSA:3.40.190.10 32 256 1.8E-97 T 11-10-2018 VSVS12_01722 d1f1b1f0cd5b7dbbd85167265ffda91c 273 Gene3D G3DSA:3.40.190.10 107 219 1.8E-97 T 11-10-2018 VSVS12_01722 d1f1b1f0cd5b7dbbd85167265ffda91c 273 SUPERFAMILY SSF53850 30 258 3.54E-31 T 11-10-2018 VSVS12_01722 d1f1b1f0cd5b7dbbd85167265ffda91c 273 Pfam PF12849 PBP superfamily domain 31 248 5.5E-32 T 11-10-2018 IPR024370 PBP domain VSVS12_00470 987e2811ffae0c9aeeddf6e4e23fbe37 103 SUPERFAMILY SSF54999 5 101 1.7E-36 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily VSVS12_00470 987e2811ffae0c9aeeddf6e4e23fbe37 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.1E-45 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00470 987e2811ffae0c9aeeddf6e4e23fbe37 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 3.3E-18 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00470 987e2811ffae0c9aeeddf6e4e23fbe37 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 3.3E-18 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00470 987e2811ffae0c9aeeddf6e4e23fbe37 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 3.3E-18 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00470 987e2811ffae0c9aeeddf6e4e23fbe37 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 8.5E-35 T 11-10-2018 IPR027486 Ribosomal protein S10 domain VSVS12_00470 987e2811ffae0c9aeeddf6e4e23fbe37 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 26.898 T 11-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00470 987e2811ffae0c9aeeddf6e4e23fbe37 103 SMART SM01403 7 101 8.0E-56 T 11-10-2018 IPR027486 Ribosomal protein S10 domain VSVS12_00470 987e2811ffae0c9aeeddf6e4e23fbe37 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 11-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00470 987e2811ffae0c9aeeddf6e4e23fbe37 103 Gene3D G3DSA:3.30.70.600 1 103 1.2E-37 T 11-10-2018 IPR036838 Ribosomal protein S10 domain superfamily VSVS12_03886 b575f6d04cadcf2b637fb8428517a424 379 Pfam PF05144 Phage replication protein CRI 61 244 5.9E-10 T 11-10-2018 IPR022686 Replication-associated protein G2P, N-terminal GO:0006260 VSVS12_03886 b575f6d04cadcf2b637fb8428517a424 379 TIGRFAM TIGR01629 rep_II_X: phage/plasmid replication protein, gene II/X family 62 363 2.7E-13 T 11-10-2018 IPR006516 Replication-associated protein G2P GO:0006260 VSVS12_03886 b575f6d04cadcf2b637fb8428517a424 379 Pfam PF05155 Phage X family 282 367 2.7E-29 T 11-10-2018 IPR022688 Replication-associated protein G2P, C-terminal GO:0006260 VSVS12_03894 b575f6d04cadcf2b637fb8428517a424 379 Pfam PF05144 Phage replication protein CRI 61 244 5.9E-10 T 11-10-2018 IPR022686 Replication-associated protein G2P, N-terminal GO:0006260 VSVS12_03894 b575f6d04cadcf2b637fb8428517a424 379 TIGRFAM TIGR01629 rep_II_X: phage/plasmid replication protein, gene II/X family 62 363 2.7E-13 T 11-10-2018 IPR006516 Replication-associated protein G2P GO:0006260 VSVS12_03894 b575f6d04cadcf2b637fb8428517a424 379 Pfam PF05155 Phage X family 282 367 2.7E-29 T 11-10-2018 IPR022688 Replication-associated protein G2P, C-terminal GO:0006260 VSVS12_01261 e30385d9afec287c58315085d8349df5 1028 Gene3D G3DSA:3.20.20.140 1 252 7.1E-40 T 11-10-2018 VSVS12_01261 e30385d9afec287c58315085d8349df5 1028 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 4 973 2.4E-157 T 11-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VSVS12_01261 e30385d9afec287c58315085d8349df5 1028 Pfam PF02811 PHP domain 8 100 1.5E-9 T 11-10-2018 IPR004013 PHP domain GO:0003824 VSVS12_01261 e30385d9afec287c58315085d8349df5 1028 Gene3D G3DSA:2.40.50.140 921 1020 4.0E-5 T 11-10-2018 VSVS12_01261 e30385d9afec287c58315085d8349df5 1028 Pfam PF01336 OB-fold nucleic acid binding domain 938 1013 2.4E-10 T 11-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 VSVS12_01261 e30385d9afec287c58315085d8349df5 1028 SMART SM00481 4 73 2.5E-8 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal VSVS12_01261 e30385d9afec287c58315085d8349df5 1028 Hamap MF_01902 Error-prone DNA polymerase [dnaE2]. 3 1028 13.135 T 11-10-2018 IPR023073 DNA polymerase, error-prone GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VSVS12_01261 e30385d9afec287c58315085d8349df5 1028 Pfam PF14579 Helix-hairpin-helix motif 773 860 2.2E-16 T 11-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VSVS12_01261 e30385d9afec287c58315085d8349df5 1028 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 274 699 5.4E-146 T 11-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VSVS12_00355 ae36c72705a3a42b11979b41eb11a590 313 Gene3D G3DSA:3.40.50.720 3 307 1.9E-114 T 11-10-2018 VSVS12_00355 ae36c72705a3a42b11979b41eb11a590 313 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 241 2.9E-44 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 VSVS12_00355 ae36c72705a3a42b11979b41eb11a590 313 Gene3D G3DSA:3.90.25.10 173 295 1.9E-114 T 11-10-2018 VSVS12_00355 ae36c72705a3a42b11979b41eb11a590 313 SUPERFAMILY SSF51735 1 308 3.48E-58 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_00355 ae36c72705a3a42b11979b41eb11a590 313 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 309 1.7E-123 T 11-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 VSVS12_00355 ae36c72705a3a42b11979b41eb11a590 313 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 313 45.919 T 11-10-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 VSVS12_01934 ebd7c07aca4459fdaf11d5470c08c90c 159 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 1 151 25.747 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VSVS12_01934 ebd7c07aca4459fdaf11d5470c08c90c 159 Gene3D G3DSA:3.30.1060.10 1 155 4.5E-39 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VSVS12_01934 ebd7c07aca4459fdaf11d5470c08c90c 159 SUPERFAMILY SSF55068 1 148 1.2E-46 T 11-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VSVS12_01934 ebd7c07aca4459fdaf11d5470c08c90c 159 Pfam PF01625 Peptide methionine sulfoxide reductase 3 146 3.9E-41 T 11-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 VSVS12_03180 bfe3964e2fce99a329573283be74c3ea 300 Gene3D G3DSA:3.40.190.290 95 289 2.0E-37 T 11-10-2018 VSVS12_03180 bfe3964e2fce99a329573283be74c3ea 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 1.5E-13 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_03180 bfe3964e2fce99a329573283be74c3ea 300 SUPERFAMILY SSF53850 93 291 3.1E-30 T 11-10-2018 VSVS12_03180 bfe3964e2fce99a329573283be74c3ea 300 Gene3D G3DSA:1.10.10.10 7 93 5.7E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_03180 bfe3964e2fce99a329573283be74c3ea 300 SUPERFAMILY SSF46785 6 114 2.72E-15 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_03180 bfe3964e2fce99a329573283be74c3ea 300 Pfam PF03466 LysR substrate binding domain 93 289 1.4E-28 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_01578 d9bf5eef66619dcdbc74d7c1ab28cc87 243 Gene3D G3DSA:3.40.190.10 27 240 5.2E-75 T 11-10-2018 VSVS12_01578 d9bf5eef66619dcdbc74d7c1ab28cc87 243 SUPERFAMILY SSF53850 1 242 2.66E-66 T 11-10-2018 VSVS12_01578 d9bf5eef66619dcdbc74d7c1ab28cc87 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 11-10-2018 IPR018313 Solute-binding protein family 3, conserved site VSVS12_01578 d9bf5eef66619dcdbc74d7c1ab28cc87 243 SMART SM00062 22 243 1.4E-72 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VSVS12_01578 d9bf5eef66619dcdbc74d7c1ab28cc87 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 241 2.5E-80 T 11-10-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0030288|GO:0071705 VSVS12_01578 d9bf5eef66619dcdbc74d7c1ab28cc87 243 Gene3D G3DSA:3.40.190.10 109 201 5.2E-75 T 11-10-2018 VSVS12_01578 d9bf5eef66619dcdbc74d7c1ab28cc87 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 243 3.5E-64 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VSVS12_02242 9badf1ebb214e0e3b4f6d7be3c3d9eef 68 Pfam PF04995 Heme exporter protein D (CcmD) 13 55 4.2E-15 T 11-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 VSVS12_02242 9badf1ebb214e0e3b4f6d7be3c3d9eef 68 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 10 56 1.4E-17 T 11-10-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 VSVS12_02776 74bfc2db4e32784f54da94b8bb6ec4fc 327 Pfam PF00140 Sigma-70 factor, region 1.2 50 83 4.0E-12 T 11-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VSVS12_02776 74bfc2db4e32784f54da94b8bb6ec4fc 327 Gene3D G3DSA:1.10.601.10 1 157 8.1E-49 T 11-10-2018 VSVS12_02776 74bfc2db4e32784f54da94b8bb6ec4fc 327 Pfam PF04542 Sigma-70 region 2 88 157 6.8E-20 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VSVS12_02776 74bfc2db4e32784f54da94b8bb6ec4fc 327 Pfam PF04539 Sigma-70 region 3 168 241 2.4E-20 T 11-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 VSVS12_02776 74bfc2db4e32784f54da94b8bb6ec4fc 327 SUPERFAMILY SSF88659 161 234 1.7E-14 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VSVS12_02776 74bfc2db4e32784f54da94b8bb6ec4fc 327 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 10 322 39.51 T 11-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VSVS12_02776 74bfc2db4e32784f54da94b8bb6ec4fc 327 SUPERFAMILY SSF88659 218 316 5.67E-24 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VSVS12_02776 74bfc2db4e32784f54da94b8bb6ec4fc 327 SUPERFAMILY SSF88946 50 158 1.13E-45 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VSVS12_02776 74bfc2db4e32784f54da94b8bb6ec4fc 327 Pfam PF04545 Sigma-70, region 4 256 309 1.3E-17 T 11-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 VSVS12_02776 74bfc2db4e32784f54da94b8bb6ec4fc 327 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 112 125 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VSVS12_02776 74bfc2db4e32784f54da94b8bb6ec4fc 327 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 84 311 1.4E-36 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VSVS12_02776 74bfc2db4e32784f54da94b8bb6ec4fc 327 Gene3D G3DSA:1.10.10.10 161 236 4.3E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_02776 74bfc2db4e32784f54da94b8bb6ec4fc 327 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 42 322 4.2E-139 T 11-10-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VSVS12_02776 74bfc2db4e32784f54da94b8bb6ec4fc 327 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 281 307 - T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VSVS12_02776 74bfc2db4e32784f54da94b8bb6ec4fc 327 PRINTS PR00046 Major sigma-70 factor signature 112 125 1.4E-27 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VSVS12_02776 74bfc2db4e32784f54da94b8bb6ec4fc 327 PRINTS PR00046 Major sigma-70 factor signature 260 272 1.4E-27 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VSVS12_02776 74bfc2db4e32784f54da94b8bb6ec4fc 327 PRINTS PR00046 Major sigma-70 factor signature 296 307 1.4E-27 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VSVS12_02776 74bfc2db4e32784f54da94b8bb6ec4fc 327 PRINTS PR00046 Major sigma-70 factor signature 136 144 1.4E-27 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VSVS12_02776 74bfc2db4e32784f54da94b8bb6ec4fc 327 PRINTS PR00046 Major sigma-70 factor signature 281 296 1.4E-27 T 11-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 VSVS12_02776 74bfc2db4e32784f54da94b8bb6ec4fc 327 Gene3D G3DSA:1.10.10.10 244 322 1.8E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_01815 a70d80d1950039c758932b499979eb4c 513 Pfam PF11230 Protein of unknown function (DUF3029) 21 502 2.0E-229 T 11-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted VSVS12_01815 a70d80d1950039c758932b499979eb4c 513 TIGRFAM TIGR04040 glycyl_YjjI: glycine radical enzyme, YjjI family 10 502 3.4E-234 T 11-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted VSVS12_01815 a70d80d1950039c758932b499979eb4c 513 PIRSF PIRSF028991 5 513 4.2E-286 T 11-10-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted VSVS12_01815 a70d80d1950039c758932b499979eb4c 513 SUPERFAMILY SSF51998 18 468 1.74E-98 T 11-10-2018 VSVS12_02201 10501c06046de9488736da3bf41c4e3d 192 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 11-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 VSVS12_02201 10501c06046de9488736da3bf41c4e3d 192 Gene3D G3DSA:3.40.50.300 2 140 2.3E-24 T 11-10-2018 VSVS12_02201 10501c06046de9488736da3bf41c4e3d 192 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 34.969 T 11-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 VSVS12_02201 10501c06046de9488736da3bf41c4e3d 192 PIRSF PIRSF035805 1 192 2.3E-57 T 11-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 VSVS12_02201 10501c06046de9488736da3bf41c4e3d 192 Pfam PF00265 Thymidine kinase 2 186 7.3E-59 T 11-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 VSVS12_02201 10501c06046de9488736da3bf41c4e3d 192 SUPERFAMILY SSF52540 2 141 2.13E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02201 10501c06046de9488736da3bf41c4e3d 192 Gene3D G3DSA:3.30.60.20 144 189 1.4E-7 T 11-10-2018 VSVS12_02201 10501c06046de9488736da3bf41c4e3d 192 SUPERFAMILY SSF57716 142 190 1.71E-16 T 11-10-2018 VSVS12_02959 6fd35353d117651b979fdd2e0d391d7c 320 Gene3D G3DSA:3.40.50.450 4 287 1.1E-117 T 11-10-2018 VSVS12_02959 6fd35353d117651b979fdd2e0d391d7c 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 8.7E-83 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VSVS12_02959 6fd35353d117651b979fdd2e0d391d7c 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 8.7E-83 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VSVS12_02959 6fd35353d117651b979fdd2e0d391d7c 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 8.7E-83 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VSVS12_02959 6fd35353d117651b979fdd2e0d391d7c 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 8.7E-83 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VSVS12_02959 6fd35353d117651b979fdd2e0d391d7c 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 8.7E-83 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VSVS12_02959 6fd35353d117651b979fdd2e0d391d7c 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 8.7E-83 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VSVS12_02959 6fd35353d117651b979fdd2e0d391d7c 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 8.7E-83 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VSVS12_02959 6fd35353d117651b979fdd2e0d391d7c 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 8.7E-83 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VSVS12_02959 6fd35353d117651b979fdd2e0d391d7c 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 8.7E-83 T 11-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VSVS12_02959 6fd35353d117651b979fdd2e0d391d7c 320 PIRSF PIRSF000532 1 320 2.1E-130 T 11-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 VSVS12_02959 6fd35353d117651b979fdd2e0d391d7c 320 Pfam PF00365 Phosphofructokinase 4 276 1.5E-109 T 11-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VSVS12_02959 6fd35353d117651b979fdd2e0d391d7c 320 Gene3D G3DSA:3.40.50.460 143 252 1.1E-117 T 11-10-2018 VSVS12_02959 6fd35353d117651b979fdd2e0d391d7c 320 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 11-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VSVS12_02959 6fd35353d117651b979fdd2e0d391d7c 320 SUPERFAMILY SSF53784 3 310 1.96E-113 T 11-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 VSVS12_02959 6fd35353d117651b979fdd2e0d391d7c 320 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 301 3.6E-131 T 11-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 VSVS12_02959 6fd35353d117651b979fdd2e0d391d7c 320 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 320 47.492 T 11-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 VSVS12_03043 0cc5813f341b5decb2a934f0732d1be9 148 SUPERFAMILY SSF110087 3 141 2.48E-45 T 11-10-2018 IPR036182 Copper chaperone PCuAC superfamily VSVS12_03043 0cc5813f341b5decb2a934f0732d1be9 148 Pfam PF04314 Copper chaperone PCu(A)C 26 132 1.3E-38 T 11-10-2018 IPR007410 Copper chaperone PCuAC VSVS12_03043 0cc5813f341b5decb2a934f0732d1be9 148 Gene3D G3DSA:2.60.40.1890 29 144 2.2E-40 T 11-10-2018 IPR036182 Copper chaperone PCuAC superfamily VSVS12_02772 519e51014d6e987817bcc2c3b74e6d6b 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 79 3.1E-27 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02772 519e51014d6e987817bcc2c3b74e6d6b 82 SUPERFAMILY SSF54565 1 76 6.15E-28 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02772 519e51014d6e987817bcc2c3b74e6d6b 82 Gene3D G3DSA:3.30.1320.10 1 82 2.6E-31 T 11-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02772 519e51014d6e987817bcc2c3b74e6d6b 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 11-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_02772 519e51014d6e987817bcc2c3b74e6d6b 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 23.181 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02772 519e51014d6e987817bcc2c3b74e6d6b 82 Pfam PF00886 Ribosomal protein S16 8 68 1.2E-23 T 11-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_01947 9b1af93f8e8efab48f27c12bd7719722 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 1.4E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VSVS12_01947 9b1af93f8e8efab48f27c12bd7719722 188 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 1.4E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VSVS12_01947 9b1af93f8e8efab48f27c12bd7719722 188 SUPERFAMILY SSF46689 3 67 2.98E-16 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_01947 9b1af93f8e8efab48f27c12bd7719722 188 Gene3D G3DSA:1.10.357.10 1 186 7.0E-28 T 11-10-2018 VSVS12_01947 9b1af93f8e8efab48f27c12bd7719722 188 ProSitePatterns PS01081 TetR-type HTH domain signature. 19 50 - T 11-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site VSVS12_01947 9b1af93f8e8efab48f27c12bd7719722 188 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 53 1.9E-15 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VSVS12_01970 c381d561b90f59a335b3aeb1bb77596f 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 5.9E-17 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_01970 c381d561b90f59a335b3aeb1bb77596f 291 SUPERFAMILY SSF46785 2 112 3.95E-17 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_01970 c381d561b90f59a335b3aeb1bb77596f 291 Pfam PF03466 LysR substrate binding domain 88 289 4.3E-35 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_01970 c381d561b90f59a335b3aeb1bb77596f 291 SUPERFAMILY SSF53850 89 290 6.52E-33 T 11-10-2018 VSVS12_01970 c381d561b90f59a335b3aeb1bb77596f 291 Gene3D G3DSA:3.40.190.290 91 290 2.8E-34 T 11-10-2018 VSVS12_01970 c381d561b90f59a335b3aeb1bb77596f 291 Gene3D G3DSA:1.10.10.10 1 82 4.8E-17 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_00190 6a467811a18b1c576dd6561f834abd9e 156 Gene3D G3DSA:1.20.5.620 62 122 1.3E-21 T 11-10-2018 VSVS12_00190 6a467811a18b1c576dd6561f834abd9e 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 13.561 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 VSVS12_00190 6a467811a18b1c576dd6561f834abd9e 156 SUPERFAMILY SSF81573 63 121 3.53E-14 T 11-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily VSVS12_00190 6a467811a18b1c576dd6561f834abd9e 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 2.0E-36 T 11-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 VSVS12_00190 6a467811a18b1c576dd6561f834abd9e 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 4.6E-59 T 11-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 VSVS12_03940 12af4ecac0fa96924aee437f06861a26 79 Pfam PF04325 Protein of unknown function (DUF465) 33 75 1.5E-9 T 11-10-2018 IPR007420 Protein of unknown function DUF465 VSVS12_03940 12af4ecac0fa96924aee437f06861a26 79 Gene3D G3DSA:1.20.58.660 11 79 5.6E-14 T 11-10-2018 VSVS12_00729 7884c19ad1ba123d21518d1c451db42f 112 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 5.1E-45 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VSVS12_00729 7884c19ad1ba123d21518d1c451db42f 112 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 5.1E-45 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VSVS12_00729 7884c19ad1ba123d21518d1c451db42f 112 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 5.1E-45 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VSVS12_00729 7884c19ad1ba123d21518d1c451db42f 112 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 5.1E-45 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VSVS12_00729 7884c19ad1ba123d21518d1c451db42f 112 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 73 1.1E-25 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VSVS12_00729 7884c19ad1ba123d21518d1c451db42f 112 Pfam PF03840 Preprotein translocase SecG subunit 4 72 4.0E-22 T 11-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 VSVS12_01829 e84885dc0af4f1d7ec47c0225d482213 414 Pfam PF03435 Saccharopine dehydrogenase NADP binding domain 3 144 6.8E-33 T 11-10-2018 IPR005097 Saccharopine dehydrogenase, NADP binding domain GO:0016491|GO:0055114 VSVS12_01829 e84885dc0af4f1d7ec47c0225d482213 414 Gene3D G3DSA:3.40.50.720 4 398 7.3E-141 T 11-10-2018 VSVS12_01829 e84885dc0af4f1d7ec47c0225d482213 414 Pfam PF16653 Saccharopine dehydrogenase C-terminal domain 149 394 2.1E-28 T 11-10-2018 IPR032095 Saccharopine dehydrogenase, C-terminal Reactome: R-HSA-71064 VSVS12_01829 e84885dc0af4f1d7ec47c0225d482213 414 SUPERFAMILY SSF51735 3 179 3.06E-15 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_01829 e84885dc0af4f1d7ec47c0225d482213 414 Gene3D G3DSA:3.30.360.10 159 355 7.3E-141 T 11-10-2018 VSVS12_03673 0e76b975a60bfb5763804110b8cb3739 116 Gene3D G3DSA:1.10.10.10 9 115 7.1E-21 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_03673 0e76b975a60bfb5763804110b8cb3739 116 Pfam PF01022 Bacterial regulatory protein, arsR family 38 87 1.6E-12 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VSVS12_03673 0e76b975a60bfb5763804110b8cb3739 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 69 84 1.9E-7 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VSVS12_03673 0e76b975a60bfb5763804110b8cb3739 116 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 33 48 1.9E-7 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VSVS12_03673 0e76b975a60bfb5763804110b8cb3739 116 SMART SM00418 31 112 1.6E-12 T 11-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 VSVS12_03673 0e76b975a60bfb5763804110b8cb3739 116 SUPERFAMILY SSF46785 17 112 7.45E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_02381 cfc64addda8c5ab2de48d4f81a405850 556 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 552 5.4E-297 T 11-10-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 VSVS12_02381 cfc64addda8c5ab2de48d4f81a405850 556 Gene3D G3DSA:2.40.240.10 348 466 8.0E-82 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VSVS12_02381 cfc64addda8c5ab2de48d4f81a405850 556 SUPERFAMILY SSF52374 11 337 5.04E-100 T 11-10-2018 VSVS12_02381 cfc64addda8c5ab2de48d4f81a405850 556 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 529 8.3E-63 T 11-10-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VSVS12_02381 cfc64addda8c5ab2de48d4f81a405850 556 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 550 53.98 T 11-10-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 VSVS12_02381 cfc64addda8c5ab2de48d4f81a405850 556 Gene3D G3DSA:3.90.800.10 101 209 1.7E-104 T 11-10-2018 VSVS12_02381 cfc64addda8c5ab2de48d4f81a405850 556 Gene3D G3DSA:2.40.240.10 340 547 8.0E-82 T 11-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VSVS12_02381 cfc64addda8c5ab2de48d4f81a405850 556 SUPERFAMILY SSF50715 340 548 7.32E-79 T 11-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 VSVS12_02381 cfc64addda8c5ab2de48d4f81a405850 556 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 4.4E-125 T 11-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 VSVS12_02381 cfc64addda8c5ab2de48d4f81a405850 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 6.0E-10 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VSVS12_02381 cfc64addda8c5ab2de48d4f81a405850 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 6.0E-10 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VSVS12_02381 cfc64addda8c5ab2de48d4f81a405850 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 6.0E-10 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VSVS12_02381 cfc64addda8c5ab2de48d4f81a405850 556 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 6.0E-10 T 11-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 VSVS12_02381 cfc64addda8c5ab2de48d4f81a405850 556 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 11-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 VSVS12_02381 cfc64addda8c5ab2de48d4f81a405850 556 Gene3D G3DSA:3.40.50.620 30 247 1.7E-104 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VSVS12_02381 cfc64addda8c5ab2de48d4f81a405850 556 Gene3D G3DSA:1.10.1160.10 261 339 3.7E-36 T 11-10-2018 IPR020061 Glutamine-tRNA ligase, alpha-bundle domain superfamily GO:0005524 VSVS12_03762 f49ff2b88ba3a380bbad357b7fa4546f 589 SMART SM00283 327 584 1.6E-59 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_03762 f49ff2b88ba3a380bbad357b7fa4546f 589 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 370 551 7.1E-42 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_03762 f49ff2b88ba3a380bbad357b7fa4546f 589 SUPERFAMILY SSF58104 276 585 1.96E-66 T 11-10-2018 VSVS12_03762 f49ff2b88ba3a380bbad357b7fa4546f 589 Gene3D G3DSA:1.10.287.950 254 586 1.8E-63 T 11-10-2018 VSVS12_01373 0a847a8d9c1b42549e9707eb578710ff 260 Pfam PF06629 MltA-interacting protein MipA 39 260 5.0E-41 T 11-10-2018 IPR010583 MltA-interacting MipA VSVS12_02423 cad0a3c16a7f5cd91e40577609012dca 117 Pfam PF03658 RnfH family Ubiquitin 8 90 1.4E-32 T 11-10-2018 IPR005346 RnfH protein VSVS12_02423 cad0a3c16a7f5cd91e40577609012dca 117 Hamap MF_00460 Protein RnfH [rnfH]. 8 98 24.837 T 11-10-2018 IPR005346 RnfH protein VSVS12_02423 cad0a3c16a7f5cd91e40577609012dca 117 Gene3D G3DSA:3.10.20.280 2 92 1.2E-32 T 11-10-2018 IPR037021 RnfH superfamily VSVS12_02423 cad0a3c16a7f5cd91e40577609012dca 117 SUPERFAMILY SSF54285 6 82 4.8E-25 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VSVS12_02489 9da6bbce46793ea2f5853f5a35267327 377 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 3 366 57.669 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 VSVS12_02489 9da6bbce46793ea2f5853f5a35267327 377 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 5 371 3.0E-187 T 11-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 VSVS12_02489 9da6bbce46793ea2f5853f5a35267327 377 Gene3D G3DSA:3.20.20.105 1 370 8.0E-175 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 VSVS12_02489 9da6bbce46793ea2f5853f5a35267327 377 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 5 370 3.6E-178 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 VSVS12_02489 9da6bbce46793ea2f5853f5a35267327 377 Pfam PF01702 Queuine tRNA-ribosyltransferase 128 363 1.5E-96 T 11-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 VSVS12_02489 9da6bbce46793ea2f5853f5a35267327 377 SUPERFAMILY SSF51713 3 366 4.71E-166 T 11-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 VSVS12_01342 7f89ca414d472ec8ae9444ee42aee728 173 SUPERFAMILY SSF158442 17 163 7.98E-44 T 11-10-2018 IPR023380 DsbB-like superfamily VSVS12_01342 7f89ca414d472ec8ae9444ee42aee728 173 Gene3D G3DSA:1.20.1550.10 3 173 1.4E-58 T 11-10-2018 IPR023380 DsbB-like superfamily VSVS12_01342 7f89ca414d472ec8ae9444ee42aee728 173 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 9 170 22.141 T 11-10-2018 IPR022920 Disulphide bond formation protein DsbB VSVS12_01342 7f89ca414d472ec8ae9444ee42aee728 173 Pfam PF02600 Disulfide bond formation protein DsbB 14 162 2.0E-43 T 11-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 VSVS12_01198 c3236fcc7731f0f7a31d23bf68ce0129 92 Pfam PF06305 Lipopolysaccharide assembly protein A domain 22 81 2.2E-16 T 11-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 VSVS12_01198 c3236fcc7731f0f7a31d23bf68ce0129 92 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 91 19.345 T 11-10-2018 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 VSVS12_03511 b155c9a747a206040a2e1c0b5aa5c563 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 11-10-2018 VSVS12_03511 b155c9a747a206040a2e1c0b5aa5c563 334 Gene3D G3DSA:3.40.50.2300 69 322 2.2E-86 T 11-10-2018 VSVS12_03511 b155c9a747a206040a2e1c0b5aa5c563 334 Pfam PF13377 Periplasmic binding protein-like domain 170 330 7.5E-41 T 11-10-2018 VSVS12_03511 b155c9a747a206040a2e1c0b5aa5c563 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.6E-19 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VSVS12_03511 b155c9a747a206040a2e1c0b5aa5c563 334 SUPERFAMILY SSF53822 60 331 6.48E-92 T 11-10-2018 IPR028082 Periplasmic binding protein-like I VSVS12_03511 b155c9a747a206040a2e1c0b5aa5c563 334 SUPERFAMILY SSF47413 1 59 1.44E-17 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VSVS12_03511 b155c9a747a206040a2e1c0b5aa5c563 334 SMART SM00354 1 71 3.5E-34 T 11-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 VSVS12_03511 b155c9a747a206040a2e1c0b5aa5c563 334 Gene3D G3DSA:3.40.50.2300 161 290 2.2E-86 T 11-10-2018 VSVS12_03511 b155c9a747a206040a2e1c0b5aa5c563 334 Gene3D G3DSA:1.10.260.40 3 59 3.4E-23 T 11-10-2018 VSVS12_02298 270330fdabeb00d18a35c391e66acfc2 165 Pfam PF03748 Flagellar basal body-associated protein FliL 64 165 1.7E-18 T 11-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 VSVS12_02451 5a5d17bd8a849a351295c53799ddc760 318 Gene3D G3DSA:1.10.260.40 10 120 4.5E-24 T 11-10-2018 VSVS12_02451 5a5d17bd8a849a351295c53799ddc760 318 Pfam PF13413 Helix-turn-helix domain 25 83 2.2E-17 T 11-10-2018 VSVS12_02451 5a5d17bd8a849a351295c53799ddc760 318 Pfam PF13464 Domain of unknown function (DUF4115) 245 317 2.8E-25 T 11-10-2018 IPR025194 Domain of unknown function DUF4115 VSVS12_02451 5a5d17bd8a849a351295c53799ddc760 318 SUPERFAMILY SSF47413 18 86 3.1E-6 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VSVS12_01995 a2e1993244a1eb23c9964729114f98bf 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 327 7.9E-112 T 11-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 VSVS12_01995 a2e1993244a1eb23c9964729114f98bf 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 2.2E-106 T 11-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 VSVS12_01995 a2e1993244a1eb23c9964729114f98bf 327 SUPERFAMILY SSF46589 14 99 1.62E-22 T 11-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 VSVS12_01995 a2e1993244a1eb23c9964729114f98bf 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 49.14 T 11-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 VSVS12_01995 a2e1993244a1eb23c9964729114f98bf 327 Gene3D G3DSA:3.30.930.10 7 327 1.1E-127 T 11-10-2018 VSVS12_01995 a2e1993244a1eb23c9964729114f98bf 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 2.8E-25 T 11-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 VSVS12_01995 a2e1993244a1eb23c9964729114f98bf 327 SUPERFAMILY SSF55681 92 327 3.08E-83 T 11-10-2018 VSVS12_03336 9462890bfee871cd022d822ee5d50163 200 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 148 8.3E-32 T 11-10-2018 IPR002178 PTS EIIA type-2 domain VSVS12_03336 9462890bfee871cd022d822ee5d50163 200 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 11-10-2018 IPR002178 PTS EIIA type-2 domain VSVS12_03336 9462890bfee871cd022d822ee5d50163 200 SUPERFAMILY SSF55804 1 149 1.96E-32 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VSVS12_03336 9462890bfee871cd022d822ee5d50163 200 Gene3D G3DSA:3.40.930.10 1 151 8.4E-35 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VSVS12_03336 9462890bfee871cd022d822ee5d50163 200 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 8 135 4.9E-36 T 11-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 VSVS12_00596 1c057a22616893956ce2d88614df61d4 406 Pfam PF00482 Type II secretion system (T2SS), protein F 71 194 1.0E-30 T 11-10-2018 IPR018076 Type II secretion system F domain VSVS12_00596 1c057a22616893956ce2d88614df61d4 406 Pfam PF00482 Type II secretion system (T2SS), protein F 274 396 3.9E-27 T 11-10-2018 IPR018076 Type II secretion system F domain VSVS12_00596 1c057a22616893956ce2d88614df61d4 406 Gene3D G3DSA:1.20.81.30 62 176 8.6E-32 T 11-10-2018 VSVS12_00596 1c057a22616893956ce2d88614df61d4 406 Gene3D G3DSA:1.20.81.30 257 370 7.9E-29 T 11-10-2018 VSVS12_00596 1c057a22616893956ce2d88614df61d4 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 385 404 1.2E-8 T 11-10-2018 IPR003004 GspF/PilC family VSVS12_00596 1c057a22616893956ce2d88614df61d4 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 369 383 1.2E-8 T 11-10-2018 IPR003004 GspF/PilC family VSVS12_00596 1c057a22616893956ce2d88614df61d4 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 166 194 1.2E-8 T 11-10-2018 IPR003004 GspF/PilC family VSVS12_00596 1c057a22616893956ce2d88614df61d4 406 PRINTS PR00812 Bacterial general secretion pathway protein F signature 67 79 1.2E-8 T 11-10-2018 IPR003004 GspF/PilC family VSVS12_01796 67d0a3c01594c7bdb44f914a7b851df5 265 SUPERFAMILY SSF161098 60 245 2.88E-45 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_01796 67d0a3c01594c7bdb44f914a7b851df5 265 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 258 4.3E-21 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VSVS12_01796 67d0a3c01594c7bdb44f914a7b851df5 265 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 59 153 9.5E-25 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VSVS12_01796 67d0a3c01594c7bdb44f914a7b851df5 265 Gene3D G3DSA:1.10.3720.10 50 260 8.8E-54 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_02672 d4736f2ad94c3dfa3ec1e50dae33e138 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.2E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_02672 d4736f2ad94c3dfa3ec1e50dae33e138 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 61 72 1.2E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_02672 d4736f2ad94c3dfa3ec1e50dae33e138 322 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 51 61 1.2E-7 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_02672 d4736f2ad94c3dfa3ec1e50dae33e138 322 Gene3D G3DSA:3.40.190.10 108 307 2.2E-38 T 11-10-2018 VSVS12_02672 d4736f2ad94c3dfa3ec1e50dae33e138 322 Gene3D G3DSA:1.10.10.10 14 104 6.1E-32 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_02672 d4736f2ad94c3dfa3ec1e50dae33e138 322 Gene3D G3DSA:3.40.190.10 187 283 2.2E-38 T 11-10-2018 VSVS12_02672 d4736f2ad94c3dfa3ec1e50dae33e138 322 Pfam PF03466 LysR substrate binding domain 119 312 2.7E-21 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_02672 d4736f2ad94c3dfa3ec1e50dae33e138 322 SUPERFAMILY SSF53850 106 311 7.42E-38 T 11-10-2018 VSVS12_02672 d4736f2ad94c3dfa3ec1e50dae33e138 322 SUPERFAMILY SSF46785 22 99 7.07E-20 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_02672 d4736f2ad94c3dfa3ec1e50dae33e138 322 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 84 7.2E-18 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_04570 90b076429841d0abf2d50371cea06310 491 Gene3D G3DSA:3.40.640.10 70 343 3.9E-146 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VSVS12_04570 90b076429841d0abf2d50371cea06310 491 Pfam PF01212 Beta-eliminating lyase 96 454 1.1E-39 T 11-10-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 VSVS12_04570 90b076429841d0abf2d50371cea06310 491 Gene3D G3DSA:3.90.1150.10 27 483 3.9E-146 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VSVS12_04570 90b076429841d0abf2d50371cea06310 491 SUPERFAMILY SSF53383 25 486 6.25E-54 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VSVS12_04055 bef41c091e1a57aec37a9b59d56d5239 92 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 10 74 3.2E-16 T 11-10-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM VSVS12_04055 bef41c091e1a57aec37a9b59d56d5239 92 TIGRFAM TIGR01552 phd_fam: prevent-host-death family protein 12 63 1.5E-12 T 11-10-2018 VSVS12_04055 bef41c091e1a57aec37a9b59d56d5239 92 SUPERFAMILY SSF143120 10 81 9.94E-17 T 11-10-2018 IPR036165 YefM-like superfamily VSVS12_04055 bef41c091e1a57aec37a9b59d56d5239 92 Gene3D G3DSA:3.40.1620.40 12 74 2.1E-10 T 11-10-2018 VSVS12_00325 a6234f7c8efa647e5d874a5ace723cde 316 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 9 303 8.0E-75 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VSVS12_00325 a6234f7c8efa647e5d874a5ace723cde 316 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 9 310 1.0E-127 T 11-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 VSVS12_00325 a6234f7c8efa647e5d874a5ace723cde 316 PIRSF PIRSF026649 7 312 1.8E-80 T 11-10-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 VSVS12_00325 a6234f7c8efa647e5d874a5ace723cde 316 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 8 315 43.172 T 11-10-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 VSVS12_03937 b96c9a12727c46a00e743ff70b5ca8b7 151 PIRSF PIRSF006105 1 151 7.4E-47 T 11-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB VSVS12_03937 b96c9a12727c46a00e743ff70b5ca8b7 151 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 32 145 8.1E-48 T 11-10-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB VSVS12_03937 b96c9a12727c46a00e743ff70b5ca8b7 151 Gene3D G3DSA:1.10.1130.10 65 132 3.3E-29 T 11-10-2018 VSVS12_03937 b96c9a12727c46a00e743ff70b5ca8b7 151 SUPERFAMILY SSF48695 33 148 6.2E-40 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily VSVS12_00198 3cdcd94ef6254cecdecb64c4a9647b46 144 Pfam PF00258 Flavodoxin 4 136 1.1E-21 T 11-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 VSVS12_00198 3cdcd94ef6254cecdecb64c4a9647b46 144 Gene3D G3DSA:3.40.50.360 1 144 1.1E-43 T 11-10-2018 IPR029039 Flavoprotein-like superfamily VSVS12_00198 3cdcd94ef6254cecdecb64c4a9647b46 144 SUPERFAMILY SSF52218 2 144 1.76E-39 T 11-10-2018 IPR029039 Flavoprotein-like superfamily VSVS12_01724 7a2cc4ee366fff2bc2e46a15cc5fbc2d 238 SUPERFAMILY SSF52540 5 216 3.73E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01724 7a2cc4ee366fff2bc2e46a15cc5fbc2d 238 Pfam PF00005 ABC transporter 25 165 4.6E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_01724 7a2cc4ee366fff2bc2e46a15cc5fbc2d 238 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_01724 7a2cc4ee366fff2bc2e46a15cc5fbc2d 238 Gene3D G3DSA:3.40.50.300 1 233 1.1E-51 T 11-10-2018 VSVS12_01724 7a2cc4ee366fff2bc2e46a15cc5fbc2d 238 SMART SM00382 29 213 1.7E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_00972 a10dbafe07fd076ab27d37520d67c9e7 275 Gene3D G3DSA:3.40.50.150 75 274 8.0E-60 T 11-10-2018 VSVS12_00972 a10dbafe07fd076ab27d37520d67c9e7 275 Gene3D G3DSA:1.10.155.10 1 74 2.5E-10 T 11-10-2018 IPR036804 Chemotaxis receptor methyltransferase CheR, N-terminal domain superfamily VSVS12_00972 a10dbafe07fd076ab27d37520d67c9e7 275 Pfam PF01739 CheR methyltransferase, SAM binding domain 76 269 1.7E-67 T 11-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal VSVS12_00972 a10dbafe07fd076ab27d37520d67c9e7 275 SUPERFAMILY SSF53335 76 269 6.94E-51 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_00972 a10dbafe07fd076ab27d37520d67c9e7 275 Pfam PF03705 CheR methyltransferase, all-alpha domain 9 58 6.1E-10 T 11-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal VSVS12_00972 a10dbafe07fd076ab27d37520d67c9e7 275 SMART SM00138 8 272 9.7E-133 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VSVS12_00972 a10dbafe07fd076ab27d37520d67c9e7 275 SUPERFAMILY SSF47757 3 75 2.09E-14 T 11-10-2018 VSVS12_00972 a10dbafe07fd076ab27d37520d67c9e7 275 PRINTS PR00996 Glutamate methyltransferase family signature 30 43 3.3E-43 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VSVS12_00972 a10dbafe07fd076ab27d37520d67c9e7 275 PRINTS PR00996 Glutamate methyltransferase family signature 143 159 3.3E-43 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VSVS12_00972 a10dbafe07fd076ab27d37520d67c9e7 275 PRINTS PR00996 Glutamate methyltransferase family signature 212 226 3.3E-43 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VSVS12_00972 a10dbafe07fd076ab27d37520d67c9e7 275 PRINTS PR00996 Glutamate methyltransferase family signature 106 126 3.3E-43 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VSVS12_00972 a10dbafe07fd076ab27d37520d67c9e7 275 PRINTS PR00996 Glutamate methyltransferase family signature 231 254 3.3E-43 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VSVS12_00972 a10dbafe07fd076ab27d37520d67c9e7 275 PRINTS PR00996 Glutamate methyltransferase family signature 69 81 3.3E-43 T 11-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 VSVS12_03014 34adef80211055f7bfd5b5b0f78edc56 369 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 368 44.688 T 11-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 VSVS12_03014 34adef80211055f7bfd5b5b0f78edc56 369 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 350 360 - T 11-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site VSVS12_03014 34adef80211055f7bfd5b5b0f78edc56 369 Gene3D G3DSA:3.40.50.150 13 363 2.1E-139 T 11-10-2018 VSVS12_03014 34adef80211055f7bfd5b5b0f78edc56 369 SUPERFAMILY SSF53335 9 367 2.45E-55 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_03014 34adef80211055f7bfd5b5b0f78edc56 369 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 11 368 1.6E-185 T 11-10-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 VSVS12_03014 34adef80211055f7bfd5b5b0f78edc56 369 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 301 330 - T 11-10-2018 IPR030390 RNA methyltransferase TrmA, active site VSVS12_03014 34adef80211055f7bfd5b5b0f78edc56 369 Gene3D G3DSA:3.40.1350.30 45 189 2.1E-139 T 11-10-2018 VSVS12_03014 34adef80211055f7bfd5b5b0f78edc56 369 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 11 368 1.3E-189 T 11-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 VSVS12_01606 ed5149511da313363e351c208f1dde7d 259 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 10 249 1.3E-34 T 11-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 VSVS12_01606 ed5149511da313363e351c208f1dde7d 259 Pfam PF02654 Cobalamin-5-phosphate synthase 15 248 5.7E-52 T 11-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 VSVS12_01606 ed5149511da313363e351c208f1dde7d 259 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 259 45.864 T 11-10-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5509|MetaCyc: PWY-6269|MetaCyc: PWY-7961|MetaCyc: PWY-7963|MetaCyc: PWY-7964|MetaCyc: PWY-7965|MetaCyc: PWY-7966|MetaCyc: PWY-7967|MetaCyc: PWY-7968|MetaCyc: PWY-7969|MetaCyc: PWY-7970|MetaCyc: PWY-7975 VSVS12_03062 acb2a68fb4556d9cd4c2e99a614f827c 152 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 31.212 T 11-10-2018 IPR003791 Protein of unknown function UPF0178 VSVS12_03062 acb2a68fb4556d9cd4c2e99a614f827c 152 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 18 145 1.4E-48 T 11-10-2018 IPR003791 Protein of unknown function UPF0178 VSVS12_01893 7a3aeae7d30f0b2f0c9cc30a81cf2549 342 Pfam PF05128 Domain of unknown function (DUF697) 178 336 1.4E-49 T 11-10-2018 IPR021147 Protein of unknown function DUF697 VSVS12_01893 7a3aeae7d30f0b2f0c9cc30a81cf2549 342 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 52 336 5.8E-75 T 11-10-2018 IPR006507 Uncharacterised protein family UPF0283 VSVS12_03287 39c6b61cdd5e773662bb8c9edfaa12ba 186 Pfam PF00440 Bacterial regulatory proteins, tetR family 39 68 8.3E-7 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VSVS12_03287 39c6b61cdd5e773662bb8c9edfaa12ba 186 SUPERFAMILY SSF48498 84 159 6.89E-5 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VSVS12_03287 39c6b61cdd5e773662bb8c9edfaa12ba 186 Gene3D G3DSA:1.10.357.10 6 183 9.3E-25 T 11-10-2018 VSVS12_03287 39c6b61cdd5e773662bb8c9edfaa12ba 186 SUPERFAMILY SSF46689 22 76 6.67E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_03287 39c6b61cdd5e773662bb8c9edfaa12ba 186 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 78 160 1.6E-4 T 11-10-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 VSVS12_01742 f54ed23a55133d21dfebbdac935bceb9 209 PIRSF PIRSF006324 1 209 2.4E-55 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VSVS12_01742 f54ed23a55133d21dfebbdac935bceb9 209 Pfam PF01810 LysE type translocator 15 206 7.5E-40 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VSVS12_02118 4aa66588bc888b5dc2296ff09e083cd3 388 Gene3D G3DSA:1.25.40.10 24 239 1.1E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_02118 4aa66588bc888b5dc2296ff09e083cd3 388 Gene3D G3DSA:1.25.40.10 240 387 6.2E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_02118 4aa66588bc888b5dc2296ff09e083cd3 388 SUPERFAMILY SSF48452 134 329 2.28E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_04176 f146bb92aa329389129c7b5bfef1aea2 395 SUPERFAMILY SSF103473 5 390 6.93E-38 T 11-10-2018 IPR036259 MFS transporter superfamily VSVS12_04176 f146bb92aa329389129c7b5bfef1aea2 395 Gene3D G3DSA:1.20.1250.20 3 390 8.5E-33 T 11-10-2018 VSVS12_04176 f146bb92aa329389129c7b5bfef1aea2 395 Pfam PF07690 Major Facilitator Superfamily 16 356 2.0E-26 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VSVS12_03361 cbe4eec858383cf9cb1506a7c5567fac 319 TIGRFAM TIGR03814 Gln_ase: glutaminase A 22 314 1.7E-107 T 11-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 VSVS12_03361 cbe4eec858383cf9cb1506a7c5567fac 319 Hamap MF_00313 Glutaminase [glsA]. 12 314 40.149 T 11-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 VSVS12_03361 cbe4eec858383cf9cb1506a7c5567fac 319 Pfam PF04960 Glutaminase 30 314 5.0E-101 T 11-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 VSVS12_03361 cbe4eec858383cf9cb1506a7c5567fac 319 Gene3D G3DSA:3.40.710.10 8 316 1.1E-111 T 11-10-2018 VSVS12_03361 cbe4eec858383cf9cb1506a7c5567fac 319 SUPERFAMILY SSF56601 16 315 2.01E-103 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VSVS12_02350 65536668103bb2a1c1238b010a428334 80 Pfam PF02609 Exonuclease VII small subunit 11 61 4.3E-19 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VSVS12_02350 65536668103bb2a1c1238b010a428334 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 10 66 5.0E-22 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VSVS12_02350 65536668103bb2a1c1238b010a428334 80 Gene3D G3DSA:1.10.287.1040 4 79 4.3E-23 T 11-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 VSVS12_02350 65536668103bb2a1c1238b010a428334 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 50 3.0E-18 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VSVS12_02350 65536668103bb2a1c1238b010a428334 80 SUPERFAMILY SSF116842 2 72 2.48E-21 T 11-10-2018 VSVS12_02350 65536668103bb2a1c1238b010a428334 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 10 70 15.17 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VSVS12_02350 65536668103bb2a1c1238b010a428334 80 PIRSF PIRSF006488 1 78 1.0E-21 T 11-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 VSVS12_03174 0ebb641f283e3826a1405965f3c7ecce 132 Gene3D G3DSA:3.30.1370.150 73 132 2.3E-30 T 11-10-2018 VSVS12_03174 0ebb641f283e3826a1405965f3c7ecce 132 Pfam PF10928 Protein of unknown function (DUF2810) 78 130 1.6E-30 T 11-10-2018 IPR021230 Protein of unknown function DUF2810 VSVS12_03776 336d04a805552caa58ee8fbf5a3a5b69 200 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 22 32 - T 11-10-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 VSVS12_03776 336d04a805552caa58ee8fbf5a3a5b69 200 SUPERFAMILY SSF52266 21 198 1.11E-47 T 11-10-2018 VSVS12_03776 336d04a805552caa58ee8fbf5a3a5b69 200 Gene3D G3DSA:3.40.50.1110 19 200 1.7E-61 T 11-10-2018 IPR036514 SGNH hydrolase superfamily VSVS12_03776 336d04a805552caa58ee8fbf5a3a5b69 200 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 25 183 6.2E-23 T 11-10-2018 IPR013830 SGNH hydrolase-type esterase domain VSVS12_01272 71e447cb8654443ec51db02a3ff176c0 385 SUPERFAMILY SSF53697 19 374 4.34E-51 T 11-10-2018 VSVS12_01272 71e447cb8654443ec51db02a3ff176c0 385 Pfam PF01380 SIS domain 53 191 1.2E-14 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VSVS12_01272 71e447cb8654443ec51db02a3ff176c0 385 Gene3D G3DSA:3.40.50.10490 205 377 9.3E-58 T 11-10-2018 VSVS12_01272 71e447cb8654443ec51db02a3ff176c0 385 Gene3D G3DSA:3.40.50.10490 4 203 3.6E-59 T 11-10-2018 VSVS12_01272 71e447cb8654443ec51db02a3ff176c0 385 TIGRFAM TIGR02815 agaS_fam: putative sugar isomerase, AgaS family 16 382 5.5E-177 T 11-10-2018 IPR014180 Sugar isomerase, AgaS GO:0016853 VSVS12_01639 05c711324f0e78d2f5c92b4e77bd4434 203 Pfam PF00691 OmpA family 83 178 6.6E-18 T 11-10-2018 IPR006665 OmpA-like domain VSVS12_01639 05c711324f0e78d2f5c92b4e77bd4434 203 SUPERFAMILY SSF103088 55 181 5.62E-29 T 11-10-2018 IPR036737 OmpA-like domain superfamily VSVS12_01639 05c711324f0e78d2f5c92b4e77bd4434 203 Gene3D G3DSA:3.30.1330.60 70 182 3.1E-28 T 11-10-2018 IPR036737 OmpA-like domain superfamily VSVS12_01639 05c711324f0e78d2f5c92b4e77bd4434 203 PRINTS PR01021 OMPA domain signature 114 129 2.0E-7 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VSVS12_01639 05c711324f0e78d2f5c92b4e77bd4434 203 PRINTS PR01021 OMPA domain signature 84 106 2.0E-7 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VSVS12_01639 05c711324f0e78d2f5c92b4e77bd4434 203 PRINTS PR01021 OMPA domain signature 129 145 2.0E-7 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VSVS12_03085 b009f8f54b55c8c43c804e6cfc9fd214 128 SUPERFAMILY SSF161084 2 127 1.83E-29 T 11-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily VSVS12_03085 b009f8f54b55c8c43c804e6cfc9fd214 128 Pfam PF01124 MAPEG family 3 118 8.1E-23 T 11-10-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein VSVS12_03085 b009f8f54b55c8c43c804e6cfc9fd214 128 Gene3D G3DSA:1.20.120.550 1 126 1.7E-25 T 11-10-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain superfamily VSVS12_01499 ce321aead0042d4c513661c165402105 1112 SUPERFAMILY SSF51055 362 413 3.92E-14 T 11-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VSVS12_01499 ce321aead0042d4c513661c165402105 1112 SMART SM00495 97 142 0.9 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VSVS12_01499 ce321aead0042d4c513661c165402105 1112 SMART SM00495 17 62 6.1 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VSVS12_01499 ce321aead0042d4c513661c165402105 1112 SMART SM00495 368 409 1.1E-7 T 11-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 VSVS12_01499 ce321aead0042d4c513661c165402105 1112 Gene3D G3DSA:2.60.40.10 254 351 1.2E-14 T 11-10-2018 IPR013783 Immunoglobulin-like fold VSVS12_01499 ce321aead0042d4c513661c165402105 1112 Pfam PF14600 Cellulose-binding domain 360 413 1.8E-13 T 11-10-2018 IPR032798 Endoglucanase Z, cellulose-binding domain KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 VSVS12_01499 ce321aead0042d4c513661c165402105 1112 Gene3D G3DSA:2.60.40.10 158 253 1.9E-11 T 11-10-2018 IPR013783 Immunoglobulin-like fold VSVS12_01499 ce321aead0042d4c513661c165402105 1112 Gene3D G3DSA:2.10.10.20 360 413 2.3E-13 T 11-10-2018 VSVS12_03480 5fedc3c9b136a5e160252f9e66a9a9eb 373 Pfam PF07690 Major Facilitator Superfamily 20 342 1.3E-42 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VSVS12_03480 5fedc3c9b136a5e160252f9e66a9a9eb 373 SUPERFAMILY SSF103473 6 367 2.22E-54 T 11-10-2018 IPR036259 MFS transporter superfamily VSVS12_03480 5fedc3c9b136a5e160252f9e66a9a9eb 373 Gene3D G3DSA:1.20.1720.10 7 370 2.5E-74 T 11-10-2018 VSVS12_04086 134047a65571b82a5367b87fc2dbd497 166 Pfam PF13420 Acetyltransferase (GNAT) domain 11 161 4.7E-13 T 11-10-2018 VSVS12_04086 134047a65571b82a5367b87fc2dbd497 166 SUPERFAMILY SSF55729 5 166 8.68E-27 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_04086 134047a65571b82a5367b87fc2dbd497 166 Gene3D G3DSA:3.40.630.30 3 166 3.4E-29 T 11-10-2018 VSVS12_01607 ca6f01be6452867295170be25d375250 175 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 5 173 3.8E-60 T 11-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 VSVS12_01607 ca6f01be6452867295170be25d375250 175 PIRSF PIRSF006135 2 175 2.1E-56 T 11-10-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-6269|MetaCyc: PWY-7962|MetaCyc: PWY-7971|MetaCyc: PWY-7972 VSVS12_01607 ca6f01be6452867295170be25d375250 175 Gene3D G3DSA:3.40.50.300 3 174 1.1E-59 T 11-10-2018 VSVS12_01607 ca6f01be6452867295170be25d375250 175 SUPERFAMILY SSF52540 3 174 6.38E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03722 d4e7fb4c62d84c925c35ea32cad8ab67 392 Gene3D G3DSA:3.40.190.10 134 384 1.7E-132 T 11-10-2018 VSVS12_03722 d4e7fb4c62d84c925c35ea32cad8ab67 392 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 129 146 - T 11-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 VSVS12_03722 d4e7fb4c62d84c925c35ea32cad8ab67 392 Pfam PF13416 Bacterial extracellular solute-binding protein 46 318 1.4E-42 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein VSVS12_03722 d4e7fb4c62d84c925c35ea32cad8ab67 392 PRINTS PR00181 Maltose binding protein signature 167 186 7.4E-78 T 11-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VSVS12_03722 d4e7fb4c62d84c925c35ea32cad8ab67 392 PRINTS PR00181 Maltose binding protein signature 32 50 7.4E-78 T 11-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VSVS12_03722 d4e7fb4c62d84c925c35ea32cad8ab67 392 PRINTS PR00181 Maltose binding protein signature 147 166 7.4E-78 T 11-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VSVS12_03722 d4e7fb4c62d84c925c35ea32cad8ab67 392 PRINTS PR00181 Maltose binding protein signature 353 372 7.4E-78 T 11-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VSVS12_03722 d4e7fb4c62d84c925c35ea32cad8ab67 392 PRINTS PR00181 Maltose binding protein signature 295 316 7.4E-78 T 11-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VSVS12_03722 d4e7fb4c62d84c925c35ea32cad8ab67 392 PRINTS PR00181 Maltose binding protein signature 66 84 7.4E-78 T 11-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VSVS12_03722 d4e7fb4c62d84c925c35ea32cad8ab67 392 PRINTS PR00181 Maltose binding protein signature 229 248 7.4E-78 T 11-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VSVS12_03722 d4e7fb4c62d84c925c35ea32cad8ab67 392 PRINTS PR00181 Maltose binding protein signature 126 145 7.4E-78 T 11-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 VSVS12_03722 d4e7fb4c62d84c925c35ea32cad8ab67 392 Gene3D G3DSA:3.40.190.10 44 353 1.7E-132 T 11-10-2018 VSVS12_03722 d4e7fb4c62d84c925c35ea32cad8ab67 392 SUPERFAMILY SSF53850 24 390 8.89E-88 T 11-10-2018 VSVS12_00290 25a32e087a169dedc38b0af6b12017a5 497 Pfam PF00437 Type II/IV secretion system protein 124 389 1.3E-91 T 11-10-2018 IPR001482 Type II/IV secretion system protein VSVS12_00290 25a32e087a169dedc38b0af6b12017a5 497 Gene3D G3DSA:3.30.300.160 2 87 5.4E-30 T 11-10-2018 VSVS12_00290 25a32e087a169dedc38b0af6b12017a5 497 Gene3D G3DSA:3.40.50.300 223 497 6.6E-127 T 11-10-2018 VSVS12_00290 25a32e087a169dedc38b0af6b12017a5 497 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 317 331 - T 11-10-2018 IPR001482 Type II/IV secretion system protein VSVS12_00290 25a32e087a169dedc38b0af6b12017a5 497 Gene3D G3DSA:3.30.450.90 88 222 2.9E-55 T 11-10-2018 VSVS12_00290 25a32e087a169dedc38b0af6b12017a5 497 SUPERFAMILY SSF160246 11 75 1.31E-15 T 11-10-2018 IPR037257 General secretory system II, protein E, N-terminal superfamily VSVS12_00290 25a32e087a169dedc38b0af6b12017a5 497 SUPERFAMILY SSF52540 103 494 7.62E-106 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00290 25a32e087a169dedc38b0af6b12017a5 497 SMART SM00382 250 373 5.4E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_00290 25a32e087a169dedc38b0af6b12017a5 497 TIGRFAM TIGR02533 type_II_gspE: type II secretion system protein E 11 494 1.2E-226 T 11-10-2018 IPR013369 Type II secretion system GspE GO:0005524|GO:0008565|GO:0015627|GO:0015628 VSVS12_03267 727696eda43591d87c955b6d64459ef9 133 Pfam PF00293 NUDIX domain 15 111 1.9E-11 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VSVS12_03267 727696eda43591d87c955b6d64459ef9 133 Gene3D G3DSA:3.90.79.10 4 126 1.1E-18 T 11-10-2018 VSVS12_03267 727696eda43591d87c955b6d64459ef9 133 SUPERFAMILY SSF55811 10 112 1.04E-16 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VSVS12_00401 6bff71bd1aed689f05a6f9de5ad2ea1e 184 SUPERFAMILY SSF81301 45 182 1.46E-13 T 11-10-2018 VSVS12_00401 6bff71bd1aed689f05a6f9de5ad2ea1e 184 Pfam PF04607 Region found in RelA / SpoT proteins 73 180 7.9E-7 T 11-10-2018 IPR007685 RelA/SpoT GO:0015969 VSVS12_00401 6bff71bd1aed689f05a6f9de5ad2ea1e 184 Gene3D G3DSA:3.30.460.10 35 165 9.6E-9 T 11-10-2018 VSVS12_00223 c59697433ff1a31aa5ffe2b8341537b6 94 SUPERFAMILY SSF55021 3 74 3.08E-10 T 11-10-2018 VSVS12_00223 c59697433ff1a31aa5ffe2b8341537b6 94 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 2 70 0.001 T 11-10-2018 VSVS12_00223 c59697433ff1a31aa5ffe2b8341537b6 94 Gene3D G3DSA:3.30.70.260 1 88 1.5E-11 T 11-10-2018 VSVS12_00223 c59697433ff1a31aa5ffe2b8341537b6 94 Pfam PF13710 ACT domain 12 73 4.8E-21 T 11-10-2018 VSVS12_00869 182b99595294fed9363e9bc5b2af7bc2 251 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 184 201 - T 11-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 VSVS12_00869 182b99595294fed9363e9bc5b2af7bc2 251 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 11 239 39.114 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 VSVS12_00869 182b99595294fed9363e9bc5b2af7bc2 251 Gene3D G3DSA:3.40.1180.10 1 239 8.6E-93 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 VSVS12_00869 182b99595294fed9363e9bc5b2af7bc2 251 SUPERFAMILY SSF64005 10 234 1.2E-86 T 11-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 VSVS12_00869 182b99595294fed9363e9bc5b2af7bc2 251 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 11 238 7.1E-95 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 VSVS12_00869 182b99595294fed9363e9bc5b2af7bc2 251 Pfam PF01255 Putative undecaprenyl diphosphate synthase 18 238 1.2E-79 T 11-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 VSVS12_04180 9e3b5deef6348239e6d511a6799b14e9 335 PIRSF PIRSF029594 1 331 2.2E-96 T 11-10-2018 IPR016926 Uncharacterised conserved protein UCP029594 VSVS12_04180 9e3b5deef6348239e6d511a6799b14e9 335 Pfam PF13515 Fusaric acid resistance protein-like 181 312 1.5E-5 T 11-10-2018 VSVS12_04180 9e3b5deef6348239e6d511a6799b14e9 335 Pfam PF11168 Protein of unknown function (DUF2955) 2 141 2.3E-46 T 11-10-2018 IPR022604 Protein of unknown function DUF2955 VSVS12_00215 8c6533220aa7d47083bb52af744fd680 557 Gene3D G3DSA:3.40.190.10 44 540 1.4E-178 T 11-10-2018 VSVS12_00215 8c6533220aa7d47083bb52af744fd680 557 Gene3D G3DSA:3.90.76.10 63 169 1.4E-178 T 11-10-2018 VSVS12_00215 8c6533220aa7d47083bb52af744fd680 557 PIRSF PIRSF002741 3 533 1.0E-69 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VSVS12_00215 8c6533220aa7d47083bb52af744fd680 557 Gene3D G3DSA:3.10.105.10 269 516 1.4E-178 T 11-10-2018 VSVS12_00215 8c6533220aa7d47083bb52af744fd680 557 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 81 103 - T 11-10-2018 IPR023765 Solute-binding protein family 5, conserved site VSVS12_00215 8c6533220aa7d47083bb52af744fd680 557 SUPERFAMILY SSF53850 41 541 9.62E-99 T 11-10-2018 VSVS12_00215 8c6533220aa7d47083bb52af744fd680 557 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 451 8.6E-68 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain VSVS12_01967 b6a40896a657d55fa18432368ada9a65 344 Gene3D G3DSA:3.20.20.140 13 342 1.1E-91 T 11-10-2018 VSVS12_01967 b6a40896a657d55fa18432368ada9a65 344 SUPERFAMILY SSF51556 20 341 8.32E-79 T 11-10-2018 IPR032466 Metal-dependent hydrolase VSVS12_01967 b6a40896a657d55fa18432368ada9a65 344 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 30 339 2.0E-71 T 11-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 VSVS12_03257 51ed679ec841b7cc3a210757dd7ff22e 158 Gene3D G3DSA:3.40.630.30 1 151 9.5E-18 T 11-10-2018 VSVS12_03257 51ed679ec841b7cc3a210757dd7ff22e 158 Pfam PF13673 Acetyltransferase (GNAT) domain 46 146 2.3E-26 T 11-10-2018 IPR000182 GNAT domain VSVS12_03257 51ed679ec841b7cc3a210757dd7ff22e 158 SUPERFAMILY SSF55729 1 143 5.49E-19 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_00587 6e2b71a0b8cb95b8f9837def8f8113e8 480 SUPERFAMILY SSF53067 55 154 1.22E-9 T 11-10-2018 VSVS12_00587 6e2b71a0b8cb95b8f9837def8f8113e8 480 PIRSF PIRSF028153 1 480 5.4E-180 T 11-10-2018 IPR016871 MSHA biogenesis protein, MshI VSVS12_02033 43204b344a308d9699a1a72b774ce95c 202 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 89 - T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VSVS12_02033 43204b344a308d9699a1a72b774ce95c 202 Gene3D G3DSA:1.20.120.1760 3 198 3.4E-21 T 11-10-2018 VSVS12_02033 43204b344a308d9699a1a72b774ce95c 202 Pfam PF01066 CDP-alcohol phosphatidyltransferase 28 89 3.4E-11 T 11-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 VSVS12_03954 b2ac91da8cd8b86b58d67e7575e86949 335 Pfam PF08238 Sel1 repeat 247 265 0.16 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_03954 b2ac91da8cd8b86b58d67e7575e86949 335 Pfam PF08238 Sel1 repeat 118 150 1.0E-4 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_03954 b2ac91da8cd8b86b58d67e7575e86949 335 Pfam PF08238 Sel1 repeat 151 186 2.5E-9 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_03954 b2ac91da8cd8b86b58d67e7575e86949 335 Pfam PF08238 Sel1 repeat 51 82 1.2 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_03954 b2ac91da8cd8b86b58d67e7575e86949 335 Pfam PF08238 Sel1 repeat 267 296 0.016 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_03954 b2ac91da8cd8b86b58d67e7575e86949 335 Pfam PF08238 Sel1 repeat 188 221 9.6E-6 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_03954 b2ac91da8cd8b86b58d67e7575e86949 335 Pfam PF08238 Sel1 repeat 99 110 200.0 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_03954 b2ac91da8cd8b86b58d67e7575e86949 335 Gene3D G3DSA:1.25.40.10 20 223 9.1E-45 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_03954 b2ac91da8cd8b86b58d67e7575e86949 335 Gene3D G3DSA:1.25.40.10 228 334 2.3E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_03954 b2ac91da8cd8b86b58d67e7575e86949 335 SMART SM00671 115 150 7.2E-5 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_03954 b2ac91da8cd8b86b58d67e7575e86949 335 SMART SM00671 266 301 2.5E-4 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_03954 b2ac91da8cd8b86b58d67e7575e86949 335 SMART SM00671 83 114 12.0 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_03954 b2ac91da8cd8b86b58d67e7575e86949 335 SMART SM00671 151 186 6.1E-9 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_03954 b2ac91da8cd8b86b58d67e7575e86949 335 SMART SM00671 187 222 7.4E-6 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_03954 b2ac91da8cd8b86b58d67e7575e86949 335 SMART SM00671 224 265 10.0 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_03954 b2ac91da8cd8b86b58d67e7575e86949 335 SUPERFAMILY SSF81901 62 304 2.09E-45 T 11-10-2018 VSVS12_00077 b51b4b5154e251cbad7281a90625bc0c 260 Pfam PF09836 Putative DNA-binding domain 6 94 5.1E-20 T 11-10-2018 IPR018640 Putative DNA-binding domain, bacteria VSVS12_00300 7657f275caddb55376c43b841e097227 434 SMART SM00388 226 286 2.7E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_00300 7657f275caddb55376c43b841e097227 434 SMART SM00387 325 434 1.2E-29 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_00300 7657f275caddb55376c43b841e097227 434 SMART SM00304 173 225 2.0E-8 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_00300 7657f275caddb55376c43b841e097227 434 Pfam PF00672 HAMP domain 173 221 6.1E-7 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_00300 7657f275caddb55376c43b841e097227 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 395 413 9.8E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_00300 7657f275caddb55376c43b841e097227 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 376 9.8E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_00300 7657f275caddb55376c43b841e097227 434 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 390 9.8E-13 T 11-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 VSVS12_00300 7657f275caddb55376c43b841e097227 434 SUPERFAMILY SSF55874 292 433 4.45E-33 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_00300 7657f275caddb55376c43b841e097227 434 Gene3D G3DSA:1.10.287.130 171 281 9.2E-23 T 11-10-2018 VSVS12_00300 7657f275caddb55376c43b841e097227 434 Gene3D G3DSA:3.30.565.10 288 434 7.3E-34 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_00300 7657f275caddb55376c43b841e097227 434 Pfam PF00512 His Kinase A (phospho-acceptor) domain 229 280 4.5E-9 T 11-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 VSVS12_00300 7657f275caddb55376c43b841e097227 434 SUPERFAMILY SSF47384 220 281 1.22E-11 T 11-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 VSVS12_00300 7657f275caddb55376c43b841e097227 434 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 327 432 1.0E-21 T 11-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase VSVS12_03466 5ac8de8b433282d098f25de5a7032bb4 449 SUPERFAMILY SSF82185 168 292 2.35E-8 T 11-10-2018 VSVS12_03466 5ac8de8b433282d098f25de5a7032bb4 449 SUPERFAMILY SSF82185 47 152 3.92E-16 T 11-10-2018 VSVS12_03466 5ac8de8b433282d098f25de5a7032bb4 449 Gene3D G3DSA:2.20.110.10 43 145 4.4E-11 T 11-10-2018 VSVS12_03466 5ac8de8b433282d098f25de5a7032bb4 449 Gene3D G3DSA:3.90.930.1 146 283 3.1E-9 T 11-10-2018 VSVS12_03466 5ac8de8b433282d098f25de5a7032bb4 449 Gene3D G3DSA:3.90.930.1 309 448 1.3E-8 T 11-10-2018 VSVS12_03466 5ac8de8b433282d098f25de5a7032bb4 449 Pfam PF07661 MORN repeat variant 205 221 0.37 T 11-10-2018 IPR011652 MORN variant VSVS12_03466 5ac8de8b433282d098f25de5a7032bb4 449 Pfam PF07661 MORN repeat variant 402 423 2.5E-4 T 11-10-2018 IPR011652 MORN variant VSVS12_03466 5ac8de8b433282d098f25de5a7032bb4 449 Pfam PF07661 MORN repeat variant 71 92 0.0075 T 11-10-2018 IPR011652 MORN variant VSVS12_03466 5ac8de8b433282d098f25de5a7032bb4 449 SUPERFAMILY SSF82185 317 440 7.59E-8 T 11-10-2018 VSVS12_00822 2784e8e23f4a07c9285ba7e5b31cb509 220 Pfam PF12973 ChrR Cupin-like domain 123 194 9.2E-17 T 11-10-2018 IPR025979 ChrR-like cupin domain VSVS12_00822 2784e8e23f4a07c9285ba7e5b31cb509 220 Gene3D G3DSA:2.60.120.10 107 198 2.1E-24 T 11-10-2018 IPR014710 RmlC-like jelly roll fold VSVS12_00822 2784e8e23f4a07c9285ba7e5b31cb509 220 TIGRFAM TIGR02451 anti_sig_ChrR: anti-sigma factor, putative, ChrR family 3 217 1.9E-65 T 11-10-2018 IPR012807 Anti-sigma factor ChrR, putative VSVS12_00822 2784e8e23f4a07c9285ba7e5b31cb509 220 Gene3D G3DSA:1.10.10.1320 1 102 5.9E-10 T 11-10-2018 VSVS12_00822 2784e8e23f4a07c9285ba7e5b31cb509 220 SUPERFAMILY SSF51182 110 201 1.83E-14 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily VSVS12_02942 77dd664ae0c2b25a4562633cce5f635a 126 Gene3D G3DSA:1.20.5.1030 67 123 3.6E-16 T 11-10-2018 IPR038379 SecE superfamily VSVS12_02942 77dd664ae0c2b25a4562633cce5f635a 126 PRINTS PR01650 Bacterial translocase SecE signature 45 66 2.0E-41 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 VSVS12_02942 77dd664ae0c2b25a4562633cce5f635a 126 PRINTS PR01650 Bacterial translocase SecE signature 90 110 2.0E-41 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 VSVS12_02942 77dd664ae0c2b25a4562633cce5f635a 126 PRINTS PR01650 Bacterial translocase SecE signature 110 126 2.0E-41 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 VSVS12_02942 77dd664ae0c2b25a4562633cce5f635a 126 PRINTS PR01650 Bacterial translocase SecE signature 66 86 2.0E-41 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 VSVS12_02942 77dd664ae0c2b25a4562633cce5f635a 126 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 72 100 - T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VSVS12_02942 77dd664ae0c2b25a4562633cce5f635a 126 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 72 124 2.4E-17 T 11-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 VSVS12_02942 77dd664ae0c2b25a4562633cce5f635a 126 Hamap MF_00422 Protein translocase subunit SecE [secE]. 68 122 13.582 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VSVS12_02942 77dd664ae0c2b25a4562633cce5f635a 126 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 72 122 4.4E-20 T 11-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 VSVS12_02923 d2db2baf77b38aba1c5d9ee5fcca9fd0 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 43.935 T 11-10-2018 IPR022894 Oligoribonuclease GO:0000175 VSVS12_02923 d2db2baf77b38aba1c5d9ee5fcca9fd0 181 SMART SM00479 7 180 1.7E-22 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VSVS12_02923 d2db2baf77b38aba1c5d9ee5fcca9fd0 181 Gene3D G3DSA:3.30.420.10 1 181 8.6E-76 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VSVS12_02923 d2db2baf77b38aba1c5d9ee5fcca9fd0 181 SUPERFAMILY SSF53098 3 179 1.04E-50 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_02923 d2db2baf77b38aba1c5d9ee5fcca9fd0 181 Pfam PF00929 Exonuclease 9 170 7.6E-37 T 11-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III VSVS12_01728 07c3d0027fbd630be8bb1ea4081b0735 302 Gene3D G3DSA:3.30.420.40 4 297 1.1E-100 T 11-10-2018 VSVS12_01728 07c3d0027fbd630be8bb1ea4081b0735 302 ProSitePatterns PS01125 ROK family signature. 130 157 - T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VSVS12_01728 07c3d0027fbd630be8bb1ea4081b0735 302 Hamap MF_01271 N-acetyl-D-glucosamine kinase [nagK]. 1 302 63.01 T 11-10-2018 IPR023505 N-acetyl-D-glucosamine kinase GO:0045127 KEGG: 00520+2.7.1.59|MetaCyc: PWY-6517|MetaCyc: PWY-6906 VSVS12_01728 07c3d0027fbd630be8bb1ea4081b0735 302 Pfam PF00480 ROK family 2 300 1.2E-72 T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VSVS12_01728 07c3d0027fbd630be8bb1ea4081b0735 302 Gene3D G3DSA:3.30.420.40 119 290 1.1E-100 T 11-10-2018 VSVS12_01728 07c3d0027fbd630be8bb1ea4081b0735 302 SUPERFAMILY SSF53067 1 299 7.35E-58 T 11-10-2018 VSVS12_03120 2ebcec892844ed9f70f919ae5ac5193f 126 Pfam PF11964 SpoIIAA-like 19 122 3.1E-19 T 11-10-2018 IPR021866 SpoIIAA-like VSVS12_03120 2ebcec892844ed9f70f919ae5ac5193f 126 Gene3D G3DSA:3.40.50.10600 1 123 4.4E-49 T 11-10-2018 IPR038396 SpoIIAA-like superfamily VSVS12_03120 2ebcec892844ed9f70f919ae5ac5193f 126 SUPERFAMILY SSF52091 3 123 7.46E-40 T 11-10-2018 IPR036513 STAS domain superfamily VSVS12_04463 67c572a9d0cdf1fdd02f9d47fb6c102b 361 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 104 116 1.8E-7 T 11-10-2018 VSVS12_04463 67c572a9d0cdf1fdd02f9d47fb6c102b 361 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 130 154 1.8E-7 T 11-10-2018 VSVS12_04463 67c572a9d0cdf1fdd02f9d47fb6c102b 361 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 41 55 1.8E-7 T 11-10-2018 VSVS12_04463 67c572a9d0cdf1fdd02f9d47fb6c102b 361 Gene3D G3DSA:3.40.50.150 17 207 1.9E-15 T 11-10-2018 VSVS12_04463 67c572a9d0cdf1fdd02f9d47fb6c102b 361 SUPERFAMILY SSF53335 20 171 1.67E-17 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_01380 1a775677e85153434a280a16f754fbd0 256 SMART SM00382 31 229 1.5E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_01380 1a775677e85153434a280a16f754fbd0 256 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_01380 1a775677e85153434a280a16f754fbd0 256 PIRSF PIRSF039085 3 256 5.3E-118 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VSVS12_01380 1a775677e85153434a280a16f754fbd0 256 SUPERFAMILY SSF52540 7 251 1.52E-75 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01380 1a775677e85153434a280a16f754fbd0 256 Gene3D G3DSA:3.40.50.300 4 255 6.5E-75 T 11-10-2018 VSVS12_01380 1a775677e85153434a280a16f754fbd0 256 Pfam PF00005 ABC transporter 22 181 6.9E-32 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_00902 d6ad43a60891987b1d91f455e0589c82 225 Gene3D G3DSA:1.10.3720.10 12 225 6.3E-51 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_00902 d6ad43a60891987b1d91f455e0589c82 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 223 1.6E-23 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VSVS12_00902 d6ad43a60891987b1d91f455e0589c82 225 SUPERFAMILY SSF161098 15 210 4.06E-47 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_03224 a540a7c9f90812703506b56c9ee80af9 529 Gene3D G3DSA:3.40.50.300 3 247 8.4E-20 T 11-10-2018 VSVS12_02456 8312119e5098a1c50c09d95e928c783a 140 Pfam PF11012 Protein of unknown function (DUF2850) 61 138 2.3E-23 T 11-10-2018 IPR021271 Protein of unknown function DUF2850 VSVS12_04052 80919190ba7c8ab2061659319ac98fdb 162 Pfam PF00583 Acetyltransferase (GNAT) family 13 137 2.4E-10 T 11-10-2018 IPR000182 GNAT domain VSVS12_04052 80919190ba7c8ab2061659319ac98fdb 162 SUPERFAMILY SSF55729 3 159 2.79E-20 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_04052 80919190ba7c8ab2061659319ac98fdb 162 Gene3D G3DSA:3.40.630.30 1 161 7.8E-18 T 11-10-2018 VSVS12_03655 f9bf13d02f715e9d77d1c3694a8d8cb9 1856 SUPERFAMILY SSF141072 389 504 1.57E-7 T 11-10-2018 IPR038081 CalX-like domain superfamily VSVS12_03655 f9bf13d02f715e9d77d1c3694a8d8cb9 1856 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 176 243 0.0019 T 11-10-2018 IPR010221 VCBS repeat VSVS12_03655 f9bf13d02f715e9d77d1c3694a8d8cb9 1856 SUPERFAMILY SSF141072 667 783 1.31E-6 T 11-10-2018 IPR038081 CalX-like domain superfamily VSVS12_03655 f9bf13d02f715e9d77d1c3694a8d8cb9 1856 SUPERFAMILY SSF141072 257 354 3.92E-10 T 11-10-2018 IPR038081 CalX-like domain superfamily VSVS12_03655 f9bf13d02f715e9d77d1c3694a8d8cb9 1856 SUPERFAMILY SSF141072 806 922 2.49E-6 T 11-10-2018 IPR038081 CalX-like domain superfamily VSVS12_03655 f9bf13d02f715e9d77d1c3694a8d8cb9 1856 Gene3D G3DSA:2.60.40.2030 258 374 1.7E-5 T 11-10-2018 IPR038081 CalX-like domain superfamily VSVS12_03655 f9bf13d02f715e9d77d1c3694a8d8cb9 1856 SUPERFAMILY SSF141072 528 644 6.28E-7 T 11-10-2018 IPR038081 CalX-like domain superfamily VSVS12_03845 c5688dc4d5d7f6652732d717c3016f4c 221 SUPERFAMILY SSF141371 118 216 1.12E-15 T 11-10-2018 VSVS12_03845 c5688dc4d5d7f6652732d717c3016f4c 221 Gene3D G3DSA:2.30.110.10 3 113 4.0E-14 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VSVS12_03845 c5688dc4d5d7f6652732d717c3016f4c 221 Pfam PF12945 Flagellar protein YcgR 18 106 1.6E-9 T 11-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal VSVS12_03845 c5688dc4d5d7f6652732d717c3016f4c 221 Pfam PF07238 PilZ domain 115 212 7.0E-12 T 11-10-2018 IPR009875 PilZ domain GO:0035438 VSVS12_03845 c5688dc4d5d7f6652732d717c3016f4c 221 SUPERFAMILY SSF141371 10 115 1.45E-24 T 11-10-2018 VSVS12_03845 c5688dc4d5d7f6652732d717c3016f4c 221 Gene3D G3DSA:2.40.10.220 114 219 1.8E-9 T 11-10-2018 VSVS12_00608 781cac091e624bf4e69b5f023cc6d033 162 Pfam PF04093 rod shape-determining protein MreD 6 154 1.6E-39 T 11-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 VSVS12_00608 781cac091e624bf4e69b5f023cc6d033 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 10 154 2.0E-36 T 11-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 VSVS12_00608 781cac091e624bf4e69b5f023cc6d033 162 PIRSF PIRSF018472 1 162 2.2E-43 T 11-10-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type VSVS12_01074 3bd21fa925cb0e5b253531d56e578eaf 357 SUPERFAMILY SSF52540 96 342 3.94E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01074 3bd21fa925cb0e5b253531d56e578eaf 357 Hamap MF_02040 Iron-sulfur cluster carrier protein. 89 338 36.219 T 11-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein VSVS12_01074 3bd21fa925cb0e5b253531d56e578eaf 357 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 94 337 2.0E-100 T 11-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 VSVS12_01074 3bd21fa925cb0e5b253531d56e578eaf 357 Gene3D G3DSA:3.40.50.300 81 336 5.3E-84 T 11-10-2018 VSVS12_01074 3bd21fa925cb0e5b253531d56e578eaf 357 ProSitePatterns PS01215 Mrp family signature. 201 217 - T 11-10-2018 IPR000808 Mrp, conserved site GO:0005524 VSVS12_01298 111e781b717a1003098a7f0995b04781 355 Gene3D G3DSA:3.40.50.1100 51 157 2.2E-68 T 11-10-2018 VSVS12_01298 111e781b717a1003098a7f0995b04781 355 SUPERFAMILY SSF53686 22 335 7.33E-71 T 11-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme VSVS12_01298 111e781b717a1003098a7f0995b04781 355 Gene3D G3DSA:3.40.50.1100 24 324 2.2E-68 T 11-10-2018 VSVS12_01298 111e781b717a1003098a7f0995b04781 355 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 27 316 5.6E-42 T 11-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme VSVS12_01349 72f45c50fdfe5484b3a05a3fcd898f03 663 Gene3D G3DSA:1.10.287.950 334 663 2.3E-70 T 11-10-2018 VSVS12_01349 72f45c50fdfe5484b3a05a3fcd898f03 663 SMART SM00283 401 662 1.7E-71 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_01349 72f45c50fdfe5484b3a05a3fcd898f03 663 SMART SM00304 334 386 6.4E-6 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_01349 72f45c50fdfe5484b3a05a3fcd898f03 663 SUPERFAMILY SSF58104 354 663 8.5E-72 T 11-10-2018 VSVS12_01349 72f45c50fdfe5484b3a05a3fcd898f03 663 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 471 629 1.6E-42 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_01349 72f45c50fdfe5484b3a05a3fcd898f03 663 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 528 557 1.2E-21 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VSVS12_01349 72f45c50fdfe5484b3a05a3fcd898f03 663 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 499 526 1.2E-21 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VSVS12_01349 72f45c50fdfe5484b3a05a3fcd898f03 663 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 422 451 1.2E-21 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VSVS12_01349 72f45c50fdfe5484b3a05a3fcd898f03 663 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 180 3.3E-7 T 11-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VSVS12_01648 ff802ef3f798d09c5e93656592491200 125 Gene3D G3DSA:3.40.50.300 1 125 4.8E-42 T 11-10-2018 VSVS12_01648 ff802ef3f798d09c5e93656592491200 125 ProSitePatterns PS00211 ABC transporters family signature. 20 34 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_01648 ff802ef3f798d09c5e93656592491200 125 SUPERFAMILY SSF52540 2 118 1.74E-44 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01648 ff802ef3f798d09c5e93656592491200 125 Pfam PF00005 ABC transporter 4 48 4.2E-12 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_00472 56d5f376f420279492bd3d8bf20fcb97 200 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 200 33.917 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00472 56d5f376f420279492bd3d8bf20fcb97 200 Gene3D G3DSA:3.40.1370.10 5 200 2.1E-69 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 VSVS12_00472 56d5f376f420279492bd3d8bf20fcb97 200 SUPERFAMILY SSF52166 9 199 1.57E-73 T 11-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 VSVS12_00472 56d5f376f420279492bd3d8bf20fcb97 200 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 12 197 7.9E-76 T 11-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00472 56d5f376f420279492bd3d8bf20fcb97 200 Pfam PF00573 Ribosomal protein L4/L1 family 12 197 2.2E-65 T 11-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 VSVS12_02014 307d9505b98dfef6856d5f8a4aa5e2ec 787 SUPERFAMILY SSF56672 385 780 2.0E-111 T 11-10-2018 VSVS12_02014 307d9505b98dfef6856d5f8a4aa5e2ec 787 Gene3D G3DSA:3.90.1600.10 348 455 1.7E-28 T 11-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VSVS12_02014 307d9505b98dfef6856d5f8a4aa5e2ec 787 Gene3D G3DSA:3.30.70.2250 41 108 3.7E-40 T 11-10-2018 VSVS12_02014 307d9505b98dfef6856d5f8a4aa5e2ec 787 SUPERFAMILY SSF53098 4 389 2.71E-85 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_02014 307d9505b98dfef6856d5f8a4aa5e2ec 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 415 428 1.6E-10 T 11-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VSVS12_02014 307d9505b98dfef6856d5f8a4aa5e2ec 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 544 552 1.6E-10 T 11-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VSVS12_02014 307d9505b98dfef6856d5f8a4aa5e2ec 787 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 492 504 1.6E-10 T 11-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VSVS12_02014 307d9505b98dfef6856d5f8a4aa5e2ec 787 Gene3D G3DSA:3.90.1600.30 517 639 2.2E-9 T 11-10-2018 VSVS12_02014 307d9505b98dfef6856d5f8a4aa5e2ec 787 ProSitePatterns PS00116 DNA polymerase family B signature. 546 554 - T 11-10-2018 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VSVS12_02014 307d9505b98dfef6856d5f8a4aa5e2ec 787 SMART SM00486 153 558 6.8E-63 T 11-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VSVS12_02014 307d9505b98dfef6856d5f8a4aa5e2ec 787 Gene3D G3DSA:1.10.132.60 643 787 3.4E-57 T 11-10-2018 VSVS12_02014 307d9505b98dfef6856d5f8a4aa5e2ec 787 Gene3D G3DSA:2.40.50.590 6 153 3.7E-40 T 11-10-2018 VSVS12_02014 307d9505b98dfef6856d5f8a4aa5e2ec 787 Pfam PF03104 DNA polymerase family B, exonuclease domain 80 296 3.6E-18 T 11-10-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VSVS12_02014 307d9505b98dfef6856d5f8a4aa5e2ec 787 Gene3D G3DSA:3.30.420.10 156 347 1.8E-71 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VSVS12_02014 307d9505b98dfef6856d5f8a4aa5e2ec 787 Gene3D G3DSA:1.10.287.690 468 514 1.5E-25 T 11-10-2018 VSVS12_02014 307d9505b98dfef6856d5f8a4aa5e2ec 787 Pfam PF00136 DNA polymerase family B 378 737 1.1E-40 T 11-10-2018 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VSVS12_01856 5ba45be6a3725d71430560b16e1d1834 432 Pfam PF14067 LssY C-terminus 249 415 3.8E-37 T 11-10-2018 IPR025902 LssY-like C-terminal domain VSVS12_01856 5ba45be6a3725d71430560b16e1d1834 432 Pfam PF09335 SNARE associated Golgi protein 24 147 3.2E-18 T 11-10-2018 IPR032816 SNARE associated Golgi protein VSVS12_03012 05aa52c5cde366c14c57eef520e00484 227 Gene3D G3DSA:3.40.50.620 1 126 1.7E-9 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VSVS12_03012 05aa52c5cde366c14c57eef520e00484 227 Gene3D G3DSA:3.90.1490.10 128 222 4.4E-9 T 11-10-2018 VSVS12_03012 05aa52c5cde366c14c57eef520e00484 227 SUPERFAMILY SSF52402 1 218 1.41E-46 T 11-10-2018 VSVS12_03012 05aa52c5cde366c14c57eef520e00484 227 Pfam PF01902 Diphthamide synthase 4 212 4.5E-20 T 11-10-2018 IPR002761 Diphthamide synthase domain MetaCyc: PWY-6482|MetaCyc: PWY-7546|Reactome: R-HSA-5358493 VSVS12_00567 17db392a75db0c354c83e2529b8e0540 350 Pfam PF14815 NUDIX domain 231 343 9.2E-23 T 11-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 VSVS12_00567 17db392a75db0c354c83e2529b8e0540 350 Gene3D G3DSA:1.10.340.30 19 130 2.8E-87 T 11-10-2018 VSVS12_00567 17db392a75db0c354c83e2529b8e0540 350 Pfam PF00633 Helix-hairpin-helix motif 98 125 2.8E-7 T 11-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 VSVS12_00567 17db392a75db0c354c83e2529b8e0540 350 SMART SM00478 37 188 6.7E-47 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 VSVS12_00567 17db392a75db0c354c83e2529b8e0540 350 Gene3D G3DSA:1.10.1670.10 7 209 2.8E-87 T 11-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 VSVS12_00567 17db392a75db0c354c83e2529b8e0540 350 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 4 266 3.4E-125 T 11-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 VSVS12_00567 17db392a75db0c354c83e2529b8e0540 350 ProSitePatterns PS01155 Endonuclease III family signature. 100 129 - T 11-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 VSVS12_00567 17db392a75db0c354c83e2529b8e0540 350 SUPERFAMILY SSF48150 3 223 2.51E-75 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 VSVS12_00567 17db392a75db0c354c83e2529b8e0540 350 SMART SM00525 189 209 3.5E-4 T 11-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 VSVS12_00567 17db392a75db0c354c83e2529b8e0540 350 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 166 1.4E-19 T 11-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 VSVS12_00567 17db392a75db0c354c83e2529b8e0540 350 SUPERFAMILY SSF55811 218 345 1.3E-25 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VSVS12_00567 17db392a75db0c354c83e2529b8e0540 350 Gene3D G3DSA:3.90.79.10 220 348 1.8E-14 T 11-10-2018 VSVS12_00567 17db392a75db0c354c83e2529b8e0540 350 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 190 206 - T 11-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 VSVS12_01784 d13bfdeca0c7e6826f9bc7beb5834c12 393 SUPERFAMILY SSF53448 51 317 2.91E-28 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VSVS12_01784 d13bfdeca0c7e6826f9bc7beb5834c12 393 Gene3D G3DSA:3.90.550.10 48 261 1.3E-18 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VSVS12_01784 d13bfdeca0c7e6826f9bc7beb5834c12 393 Pfam PF13641 Glycosyltransferase like family 2 58 277 2.8E-12 T 11-10-2018 VSVS12_02849 c82416deb16e704b91c23d8b6c4b3277 240 SUPERFAMILY SSF54060 20 237 1.06E-82 T 11-10-2018 VSVS12_02849 c82416deb16e704b91c23d8b6c4b3277 240 Pfam PF04231 Endonuclease I 27 236 2.7E-43 T 11-10-2018 IPR007346 Endonuclease I GO:0004518 VSVS12_03906 0413c9bf0d782655b79b3fe0a2487a40 194 Pfam PF05036 Sporulation related domain 103 171 2.9E-11 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 VSVS12_03906 0413c9bf0d782655b79b3fe0a2487a40 194 SUPERFAMILY SSF110997 104 166 1.09E-6 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VSVS12_03906 0413c9bf0d782655b79b3fe0a2487a40 194 Gene3D G3DSA:3.30.70.1070 91 185 9.9E-22 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VSVS12_00047 7bc50bea789081c647b90bdf48d30ca0 242 SUPERFAMILY SSF53098 74 230 2.12E-35 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_00047 7bc50bea789081c647b90bdf48d30ca0 242 Pfam PF00665 Integrase core domain 77 192 5.0E-27 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VSVS12_00047 7bc50bea789081c647b90bdf48d30ca0 242 Gene3D G3DSA:3.30.420.10 73 238 6.5E-17 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VSVS12_03605 d25e199e5ab1cb9c90773e0da8bd3505 554 SMART SM00382 47 190 4.6E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_03605 d25e199e5ab1cb9c90773e0da8bd3505 554 Gene3D G3DSA:1.10.8.300 230 302 1.6E-25 T 11-10-2018 VSVS12_03605 d25e199e5ab1cb9c90773e0da8bd3505 554 Pfam PF12592 Protein of unknown function (DUF3763) 484 536 1.1E-17 T 11-10-2018 IPR022547 ATPase, RavA, C-terminal GO:0042626 VSVS12_03605 d25e199e5ab1cb9c90773e0da8bd3505 554 Gene3D G3DSA:3.40.50.300 10 229 1.2E-58 T 11-10-2018 VSVS12_03605 d25e199e5ab1cb9c90773e0da8bd3505 554 Pfam PF07728 AAA domain (dynein-related subfamily) 50 180 9.7E-23 T 11-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 VSVS12_03605 d25e199e5ab1cb9c90773e0da8bd3505 554 SUPERFAMILY SSF52540 19 294 6.06E-20 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01365 3ec5c2727058ecf28403aed320cd22d5 770 Pfam PF13567 Domain of unknown function (DUF4131) 27 171 6.9E-10 T 11-10-2018 IPR025405 Domain of unknown function DUF4131 VSVS12_01365 3ec5c2727058ecf28403aed320cd22d5 770 Pfam PF00753 Metallo-beta-lactamase superfamily 499 695 6.7E-13 T 11-10-2018 IPR001279 Metallo-beta-lactamase VSVS12_01365 3ec5c2727058ecf28403aed320cd22d5 770 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 230 402 2.2E-26 T 11-10-2018 IPR004477 ComEC/Rec2-related protein VSVS12_01365 3ec5c2727058ecf28403aed320cd22d5 770 Gene3D G3DSA:3.60.15.10 492 755 1.9E-46 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VSVS12_01365 3ec5c2727058ecf28403aed320cd22d5 770 SUPERFAMILY SSF56281 492 753 1.19E-41 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VSVS12_01365 3ec5c2727058ecf28403aed320cd22d5 770 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 126 736 1.8E-121 T 11-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 VSVS12_01365 3ec5c2727058ecf28403aed320cd22d5 770 Pfam PF03772 Competence protein 208 465 1.7E-47 T 11-10-2018 IPR004477 ComEC/Rec2-related protein VSVS12_01365 3ec5c2727058ecf28403aed320cd22d5 770 SMART SM00849 501 682 9.7E-18 T 11-10-2018 IPR001279 Metallo-beta-lactamase VSVS12_00122 3dab02aef3cb689c95bd7833d5e0f585 347 PIRSF PIRSF001415 2 336 7.8E-153 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VSVS12_00122 3dab02aef3cb689c95bd7833d5e0f585 347 SUPERFAMILY SSF51569 7 335 1.76E-145 T 11-10-2018 VSVS12_00122 3dab02aef3cb689c95bd7833d5e0f585 347 Pfam PF00490 Delta-aminolevulinic acid dehydratase 12 332 2.2E-142 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VSVS12_00122 3dab02aef3cb689c95bd7833d5e0f585 347 SMART SM01004 9 333 1.5E-246 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VSVS12_00122 3dab02aef3cb689c95bd7833d5e0f585 347 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 252 264 - T 11-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VSVS12_00122 3dab02aef3cb689c95bd7833d5e0f585 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 198 217 7.0E-58 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VSVS12_00122 3dab02aef3cb689c95bd7833d5e0f585 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 252 268 7.0E-58 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VSVS12_00122 3dab02aef3cb689c95bd7833d5e0f585 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 307 326 7.0E-58 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VSVS12_00122 3dab02aef3cb689c95bd7833d5e0f585 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 129 143 7.0E-58 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VSVS12_00122 3dab02aef3cb689c95bd7833d5e0f585 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 277 292 7.0E-58 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VSVS12_00122 3dab02aef3cb689c95bd7833d5e0f585 347 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 160 179 7.0E-58 T 11-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 VSVS12_00122 3dab02aef3cb689c95bd7833d5e0f585 347 Gene3D G3DSA:3.20.20.70 2 337 6.9E-149 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_00297 18af8dab21aa058859f5a3bfcf8f4e48 403 Pfam PF05134 Type II secretion system (T2SS), protein L 5 240 2.4E-63 T 11-10-2018 IPR024230 GspL, cytoplasmic actin-ATPase-like domain VSVS12_00297 18af8dab21aa058859f5a3bfcf8f4e48 403 PIRSF PIRSF015761 4 402 1.0E-28 T 11-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 VSVS12_00297 18af8dab21aa058859f5a3bfcf8f4e48 403 Gene3D G3DSA:3.30.420.370 142 215 2.7E-80 T 11-10-2018 VSVS12_00297 18af8dab21aa058859f5a3bfcf8f4e48 403 Pfam PF12693 GspL periplasmic domain 245 401 1.4E-39 T 11-10-2018 IPR025691 GspL periplasmic domain VSVS12_00297 18af8dab21aa058859f5a3bfcf8f4e48 403 Gene3D G3DSA:3.30.420.380 3 237 2.7E-80 T 11-10-2018 VSVS12_00297 18af8dab21aa058859f5a3bfcf8f4e48 403 Gene3D G3DSA:3.30.1360.100 317 403 4.0E-26 T 11-10-2018 VSVS12_00297 18af8dab21aa058859f5a3bfcf8f4e48 403 SUPERFAMILY SSF53067 146 238 5.96E-19 T 11-10-2018 VSVS12_00297 18af8dab21aa058859f5a3bfcf8f4e48 403 SUPERFAMILY SSF53067 2 143 3.11E-36 T 11-10-2018 VSVS12_00297 18af8dab21aa058859f5a3bfcf8f4e48 403 TIGRFAM TIGR01709 typeII_sec_gspL: type II secretion system protein L 5 402 1.0E-88 T 11-10-2018 IPR007812 Type II secretion system protein L GO:0008565|GO:0009276|GO:0015031|GO:0016021 VSVS12_03011 49aca6594d1623353ea8660de27d2a30 263 Gene3D G3DSA:3.40.50.1860 97 206 4.3E-82 T 11-10-2018 VSVS12_03011 49aca6594d1623353ea8660de27d2a30 263 SUPERFAMILY SSF53681 6 107 1.77E-30 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VSVS12_03011 49aca6594d1623353ea8660de27d2a30 263 Gene3D G3DSA:3.40.50.1860 9 234 4.3E-82 T 11-10-2018 VSVS12_03011 49aca6594d1623353ea8660de27d2a30 263 Hamap MF_00258 Glutamate racemase [murI]. 5 252 33.273 T 11-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VSVS12_03011 49aca6594d1623353ea8660de27d2a30 263 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 72 80 - T 11-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VSVS12_03011 49aca6594d1623353ea8660de27d2a30 263 SUPERFAMILY SSF53681 109 256 2.09E-32 T 11-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VSVS12_03011 49aca6594d1623353ea8660de27d2a30 263 Pfam PF01177 Asp/Glu/Hydantoin racemase 9 213 2.4E-27 T 11-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VSVS12_03011 49aca6594d1623353ea8660de27d2a30 263 TIGRFAM TIGR00067 glut_race: glutamate racemase 7 225 1.4E-71 T 11-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 VSVS12_02357 44ae45634ed9664e7e68d491f3f5356b 104 Gene3D G3DSA:1.20.1440.40 1 104 2.9E-31 T 11-10-2018 IPR036814 YqcC-like superfamily VSVS12_02357 44ae45634ed9664e7e68d491f3f5356b 104 Pfam PF04287 tRNA pseudouridine synthase C 9 101 9.9E-32 T 11-10-2018 IPR023376 YqcC-like domain VSVS12_02357 44ae45634ed9664e7e68d491f3f5356b 104 SUPERFAMILY SSF158452 3 102 5.36E-33 T 11-10-2018 IPR036814 YqcC-like superfamily VSVS12_02357 44ae45634ed9664e7e68d491f3f5356b 104 PIRSF PIRSF006257 1 104 2.0E-34 T 11-10-2018 IPR007384 Protein of unknown function UCP006257 VSVS12_01363 22f169a0711c3033c18ee6be225f1812 414 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 413 3.4E-152 T 11-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 VSVS12_01363 22f169a0711c3033c18ee6be225f1812 414 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 4 414 8.2E-204 T 11-10-2018 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0016021|GO:0042953|GO:0042954|GO:0044874 VSVS12_01363 22f169a0711c3033c18ee6be225f1812 414 Pfam PF12704 MacB-like periplasmic core domain 30 233 3.9E-15 T 11-10-2018 IPR025857 MacB-like periplasmic core domain VSVS12_01363 22f169a0711c3033c18ee6be225f1812 414 Pfam PF02687 FtsX-like permease family 301 407 8.6E-11 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VSVS12_01469 58f0f1cbd8aff2228276a6cfb845d942 320 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 17 313 8.2E-64 T 11-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 VSVS12_01469 58f0f1cbd8aff2228276a6cfb845d942 320 Pfam PF04261 Dyp-type peroxidase family 52 312 1.3E-64 T 11-10-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 VSVS12_01469 58f0f1cbd8aff2228276a6cfb845d942 320 SUPERFAMILY SSF54909 15 313 8.04E-84 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel VSVS12_04155 047a77a9291795e7770b7b86ab50eb5d 181 Pfam PF03734 L,D-transpeptidase catalytic domain 47 179 3.2E-20 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 VSVS12_04155 047a77a9291795e7770b7b86ab50eb5d 181 SUPERFAMILY SSF141523 46 179 4.71E-25 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like VSVS12_04155 047a77a9291795e7770b7b86ab50eb5d 181 Gene3D G3DSA:2.40.440.10 15 181 1.8E-19 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like VSVS12_03422 0165b47a3312aaebafd4c5aa45b7ba0e 615 Gene3D G3DSA:1.10.1370.30 30 306 1.2E-8 T 11-10-2018 VSVS12_03422 0165b47a3312aaebafd4c5aa45b7ba0e 615 Gene3D G3DSA:1.10.1370.20 321 495 2.9E-9 T 11-10-2018 VSVS12_03422 0165b47a3312aaebafd4c5aa45b7ba0e 615 Pfam PF01432 Peptidase family M3 284 545 3.2E-17 T 11-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 VSVS12_03422 0165b47a3312aaebafd4c5aa45b7ba0e 615 SUPERFAMILY SSF55486 3 550 2.2E-68 T 11-10-2018 VSVS12_01714 93b4d2a79096db49d938e186cef9714c 530 SUPERFAMILY SSF52540 6 237 2.5E-42 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01714 93b4d2a79096db49d938e186cef9714c 530 SUPERFAMILY SSF52540 333 515 3.05E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01714 93b4d2a79096db49d938e186cef9714c 530 Pfam PF00005 ABC transporter 336 466 6.4E-21 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_01714 93b4d2a79096db49d938e186cef9714c 530 Gene3D G3DSA:3.40.50.300 282 529 3.4E-50 T 11-10-2018 VSVS12_01714 93b4d2a79096db49d938e186cef9714c 530 Gene3D G3DSA:3.40.50.300 3 281 4.7E-54 T 11-10-2018 VSVS12_01714 93b4d2a79096db49d938e186cef9714c 530 SMART SM00382 26 238 2.1E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_01714 93b4d2a79096db49d938e186cef9714c 530 SMART SM00382 343 518 1.0E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_01714 93b4d2a79096db49d938e186cef9714c 530 Pfam PF12848 ABC transporter 224 309 3.3E-21 T 11-10-2018 IPR032781 ABC-transporter extension domain VSVS12_01714 93b4d2a79096db49d938e186cef9714c 530 Pfam PF00005 ABC transporter 18 184 1.7E-19 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_03559 b1e07c8fa74360ca2e477007ef9d6bc7 569 TIGRFAM TIGR01842 type_I_sec_PrtD: type I secretion system ATPase 17 551 1.2E-176 T 11-10-2018 IPR010128 ATPase, type I secretion system, PrtD GO:0005524|GO:0008565|GO:0016021|GO:0030253|GO:0030256 VSVS12_03559 b1e07c8fa74360ca2e477007ef9d6bc7 569 Gene3D G3DSA:3.40.50.300 323 568 2.9E-70 T 11-10-2018 VSVS12_03559 b1e07c8fa74360ca2e477007ef9d6bc7 569 SUPERFAMILY SSF90123 19 308 4.45E-40 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VSVS12_03559 b1e07c8fa74360ca2e477007ef9d6bc7 569 Pfam PF00005 ABC transporter 347 493 2.5E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_03559 b1e07c8fa74360ca2e477007ef9d6bc7 569 Gene3D G3DSA:1.20.1560.10 13 313 3.3E-32 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VSVS12_03559 b1e07c8fa74360ca2e477007ef9d6bc7 569 Pfam PF00664 ABC transporter transmembrane region 23 281 3.2E-12 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VSVS12_03559 b1e07c8fa74360ca2e477007ef9d6bc7 569 ProSitePatterns PS00211 ABC transporters family signature. 466 480 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_03559 b1e07c8fa74360ca2e477007ef9d6bc7 569 SUPERFAMILY SSF52540 319 553 4.51E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03559 b1e07c8fa74360ca2e477007ef9d6bc7 569 SMART SM00382 355 539 5.5E-15 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_00471 085d3b67fe43df90f7ff47bb697f8b7a 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 41.317 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00471 085d3b67fe43df90f7ff47bb697f8b7a 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 4.9E-95 T 11-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00471 085d3b67fe43df90f7ff47bb697f8b7a 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 11-10-2018 IPR019926 Ribosomal protein L3, conserved site VSVS12_00471 085d3b67fe43df90f7ff47bb697f8b7a 209 Pfam PF00297 Ribosomal protein L3 64 182 3.7E-16 T 11-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00471 085d3b67fe43df90f7ff47bb697f8b7a 209 SUPERFAMILY SSF50447 1 208 1.59E-84 T 11-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily VSVS12_00471 085d3b67fe43df90f7ff47bb697f8b7a 209 Gene3D G3DSA:2.40.50.620 32 96 1.1E-15 T 11-10-2018 VSVS12_00471 085d3b67fe43df90f7ff47bb697f8b7a 209 Gene3D G3DSA:2.40.30.10 128 209 4.7E-20 T 11-10-2018 VSVS12_00410 201872f604755e6d01d74d098e1e26f2 180 Pfam PF00227 Proteasome subunit 2 167 1.4E-22 T 11-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 VSVS12_00410 201872f604755e6d01d74d098e1e26f2 180 PIRSF PIRSF039093 1 174 1.1E-87 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 VSVS12_00410 201872f604755e6d01d74d098e1e26f2 180 SUPERFAMILY SSF56235 2 171 1.71E-57 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VSVS12_00410 201872f604755e6d01d74d098e1e26f2 180 Gene3D G3DSA:3.60.20.10 1 173 4.0E-67 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VSVS12_00410 201872f604755e6d01d74d098e1e26f2 180 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 2.1E-87 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 VSVS12_00410 201872f604755e6d01d74d098e1e26f2 180 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 42.377 T 11-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 VSVS12_02903 804f1512771d0ec95d0325805b2ed722 398 Pfam PF12221 Bacterial membrane protein N terminal 1 56 1.5E-15 T 11-10-2018 IPR020980 Menbrane protein HflK, N-terminal VSVS12_02903 804f1512771d0ec95d0325805b2ed722 398 TIGRFAM TIGR01933 hflK: HflK protein 88 349 5.4E-119 T 11-10-2018 IPR010201 HflK GO:0016021 VSVS12_02903 804f1512771d0ec95d0325805b2ed722 398 SMART SM00244 86 247 1.1E-48 T 11-10-2018 IPR001107 Band 7 domain VSVS12_02903 804f1512771d0ec95d0325805b2ed722 398 PRINTS PR00721 Stomatin signature 176 193 4.2E-5 T 11-10-2018 IPR001972 Stomatin family GO:0016020 VSVS12_02903 804f1512771d0ec95d0325805b2ed722 398 PRINTS PR00721 Stomatin signature 93 115 4.2E-5 T 11-10-2018 IPR001972 Stomatin family GO:0016020 VSVS12_02903 804f1512771d0ec95d0325805b2ed722 398 PRINTS PR00721 Stomatin signature 141 162 4.2E-5 T 11-10-2018 IPR001972 Stomatin family GO:0016020 VSVS12_02903 804f1512771d0ec95d0325805b2ed722 398 Pfam PF01145 SPFH domain / Band 7 family 90 262 6.2E-30 T 11-10-2018 IPR001107 Band 7 domain VSVS12_02903 804f1512771d0ec95d0325805b2ed722 398 SUPERFAMILY SSF117892 120 253 4.18E-23 T 11-10-2018 IPR036013 Band 7/SPFH domain superfamily VSVS12_02903 804f1512771d0ec95d0325805b2ed722 398 Gene3D G3DSA:3.30.479.30 117 249 8.2E-23 T 11-10-2018 VSVS12_04174 8e23c49044bb5e7bcc32207e50edaeba 318 Gene3D G3DSA:3.40.50.1980 21 120 1.5E-25 T 11-10-2018 VSVS12_04174 8e23c49044bb5e7bcc32207e50edaeba 318 Gene3D G3DSA:3.40.50.1980 123 297 5.6E-48 T 11-10-2018 VSVS12_04174 8e23c49044bb5e7bcc32207e50edaeba 318 SUPERFAMILY SSF53807 32 291 7.06E-49 T 11-10-2018 VSVS12_04174 8e23c49044bb5e7bcc32207e50edaeba 318 Pfam PF01497 Periplasmic binding protein 37 273 4.2E-19 T 11-10-2018 IPR002491 ABC transporter periplasmic binding domain VSVS12_04174 8e23c49044bb5e7bcc32207e50edaeba 318 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 275 288 6.1E-13 T 11-10-2018 VSVS12_04174 8e23c49044bb5e7bcc32207e50edaeba 318 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 210 228 6.1E-13 T 11-10-2018 VSVS12_04174 8e23c49044bb5e7bcc32207e50edaeba 318 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 54 72 6.1E-13 T 11-10-2018 VSVS12_04174 8e23c49044bb5e7bcc32207e50edaeba 318 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 85 100 6.1E-13 T 11-10-2018 VSVS12_03104 daace5ef06ce9396c0d0d2068a61fb74 319 Pfam PF02653 Branched-chain amino acid transport system / permease component 45 311 4.9E-34 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VSVS12_01314 a0fda9bb094559315daa668485e46d7a 302 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 26 71 9.2E-15 T 11-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VSVS12_01314 a0fda9bb094559315daa668485e46d7a 302 SUPERFAMILY SSF161098 98 283 1.57E-26 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_01314 a0fda9bb094559315daa668485e46d7a 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 300 6.2E-27 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VSVS12_01314 a0fda9bb094559315daa668485e46d7a 302 Gene3D G3DSA:1.10.3720.10 97 298 6.4E-20 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_01920 3ef122c7962b010436487f3c43f0575f 107 Pfam PF11872 Protein of unknown function (DUF3392) 2 104 2.0E-39 T 11-10-2018 IPR021813 Protein of unknown function DUF3392 VSVS12_00718 963fc23fdf38ba6279c25e1f3a154589 428 SUPERFAMILY SSF51261 142 387 1.99E-68 T 11-10-2018 IPR011055 Duplicated hybrid motif VSVS12_00718 963fc23fdf38ba6279c25e1f3a154589 428 Pfam PF01551 Peptidase family M23 294 386 7.7E-30 T 11-10-2018 IPR016047 Peptidase M23 VSVS12_00718 963fc23fdf38ba6279c25e1f3a154589 428 Pfam PF08525 Opacity-associated protein A N-terminal motif 4 30 1.4E-4 T 11-10-2018 IPR013731 Opacity-associated protein A, N-terminal VSVS12_00718 963fc23fdf38ba6279c25e1f3a154589 428 Gene3D G3DSA:3.10.450.350 63 154 3.4E-9 T 11-10-2018 VSVS12_00718 963fc23fdf38ba6279c25e1f3a154589 428 Gene3D G3DSA:2.70.70.10 265 394 5.0E-79 T 11-10-2018 IPR011055 Duplicated hybrid motif VSVS12_00718 963fc23fdf38ba6279c25e1f3a154589 428 Gene3D G3DSA:3.10.450.350 172 409 5.0E-79 T 11-10-2018 VSVS12_03070 3d2f62669039d2cda1fb99fad0759ea0 399 SMART SM00487 20 221 1.9E-61 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VSVS12_03070 3d2f62669039d2cda1fb99fad0759ea0 399 SUPERFAMILY SSF52540 73 358 5.14E-71 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03070 3d2f62669039d2cda1fb99fad0759ea0 399 Pfam PF00270 DEAD/DEAH box helicase 25 194 3.1E-48 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VSVS12_03070 3d2f62669039d2cda1fb99fad0759ea0 399 Gene3D G3DSA:3.40.50.300 217 371 1.2E-44 T 11-10-2018 VSVS12_03070 3d2f62669039d2cda1fb99fad0759ea0 399 Gene3D G3DSA:3.40.50.300 1 216 6.7E-76 T 11-10-2018 VSVS12_03070 3d2f62669039d2cda1fb99fad0759ea0 399 Pfam PF00271 Helicase conserved C-terminal domain 229 337 1.6E-26 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_03070 3d2f62669039d2cda1fb99fad0759ea0 399 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VSVS12_03070 3d2f62669039d2cda1fb99fad0759ea0 399 SMART SM00490 257 338 1.5E-29 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_00943 b0344b806bc7e6d34c844c339fc2c520 304 Gene3D G3DSA:3.40.50.720 2 303 6.7E-77 T 11-10-2018 VSVS12_00943 b0344b806bc7e6d34c844c339fc2c520 304 SUPERFAMILY SSF51735 1 301 1.13E-44 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_00943 b0344b806bc7e6d34c844c339fc2c520 304 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 218 1.1E-21 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 VSVS12_00943 b0344b806bc7e6d34c844c339fc2c520 304 Pfam PF08338 Domain of unknown function (DUF1731) 253 299 2.3E-16 T 11-10-2018 IPR013549 Domain of unknown function DUF1731 VSVS12_00943 b0344b806bc7e6d34c844c339fc2c520 304 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 296 4.3E-102 T 11-10-2018 IPR010099 Epimerase family protein SDR39U1 VSVS12_01635 da03d7a8e2979414b9509cf00ca8d9d8 221 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 2 221 33.543 T 11-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 VSVS12_01635 da03d7a8e2979414b9509cf00ca8d9d8 221 Gene3D G3DSA:3.20.20.70 1 221 8.6E-51 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_01635 da03d7a8e2979414b9509cf00ca8d9d8 221 PIRSF PIRSF000370 1 221 1.7E-62 T 11-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 VSVS12_01635 da03d7a8e2979414b9509cf00ca8d9d8 221 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 8 220 1.9E-107 T 11-10-2018 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 VSVS12_01635 da03d7a8e2979414b9509cf00ca8d9d8 221 Pfam PF13394 4Fe-4S single cluster domain 23 127 6.0E-11 T 11-10-2018 VSVS12_03599 07e46ea88eaeff25fb48eb509e80b968 308 PIRSF PIRSF002867 1 298 3.6E-86 T 11-10-2018 IPR024181 Chemotaxis response regulator CheV VSVS12_03599 07e46ea88eaeff25fb48eb509e80b968 308 Gene3D G3DSA:2.30.30.40 18 141 4.0E-23 T 11-10-2018 VSVS12_03599 07e46ea88eaeff25fb48eb509e80b968 308 SMART SM00448 173 291 5.0E-15 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_03599 07e46ea88eaeff25fb48eb509e80b968 308 SMART SM00260 10 147 7.8E-19 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VSVS12_03599 07e46ea88eaeff25fb48eb509e80b968 308 Gene3D G3DSA:3.40.50.2300 163 302 2.3E-23 T 11-10-2018 VSVS12_03599 07e46ea88eaeff25fb48eb509e80b968 308 Pfam PF01584 CheW-like domain 13 149 1.8E-28 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VSVS12_03599 07e46ea88eaeff25fb48eb509e80b968 308 Pfam PF00072 Response regulator receiver domain 175 289 8.5E-14 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_03599 07e46ea88eaeff25fb48eb509e80b968 308 Gene3D G3DSA:2.40.50.180 33 142 4.0E-23 T 11-10-2018 VSVS12_03599 07e46ea88eaeff25fb48eb509e80b968 308 SUPERFAMILY SSF52172 171 295 2.85E-22 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_03599 07e46ea88eaeff25fb48eb509e80b968 308 SUPERFAMILY SSF50341 11 151 1.11E-28 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VSVS12_03695 68533a99902536e971c1c8f8bd5ffe06 638 SUPERFAMILY SSF56935 27 638 2.62E-95 T 11-10-2018 VSVS12_03695 68533a99902536e971c1c8f8bd5ffe06 638 Pfam PF07715 TonB-dependent Receptor Plug Domain 39 135 7.7E-17 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain VSVS12_03695 68533a99902536e971c1c8f8bd5ffe06 638 Pfam PF00593 TonB dependent receptor 221 636 1.3E-43 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VSVS12_03695 68533a99902536e971c1c8f8bd5ffe06 638 Gene3D G3DSA:2.170.130.10 32 140 1.9E-41 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VSVS12_03695 68533a99902536e971c1c8f8bd5ffe06 638 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 621 638 - T 11-10-2018 IPR010917 TonB-dependent receptor, conserved site VSVS12_03695 68533a99902536e971c1c8f8bd5ffe06 638 Gene3D G3DSA:2.40.170.20 142 638 5.0E-122 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VSVS12_02980 43c37a9084a5dc7bfdc2c2a503e53883 153 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 109 126 - T 11-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 VSVS12_02980 43c37a9084a5dc7bfdc2c2a503e53883 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 82 95 1.2E-18 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 VSVS12_02980 43c37a9084a5dc7bfdc2c2a503e53883 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 114 127 1.2E-18 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 VSVS12_02980 43c37a9084a5dc7bfdc2c2a503e53883 153 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 99 113 1.2E-18 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 VSVS12_02980 43c37a9084a5dc7bfdc2c2a503e53883 153 SUPERFAMILY SSF51230 78 153 5.23E-26 T 11-10-2018 IPR011053 Single hybrid motif VSVS12_02980 43c37a9084a5dc7bfdc2c2a503e53883 153 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 153 9.9E-63 T 11-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 VSVS12_02980 43c37a9084a5dc7bfdc2c2a503e53883 153 Gene3D G3DSA:2.40.50.100 76 153 1.7E-31 T 11-10-2018 VSVS12_02980 43c37a9084a5dc7bfdc2c2a503e53883 153 Pfam PF00364 Biotin-requiring enzyme 78 152 1.3E-25 T 11-10-2018 IPR000089 Biotin/lipoyl attachment VSVS12_04116 7524499747461ab8de3b231b22e8d871 489 Gene3D G3DSA:2.115.10.20 7 331 3.9E-118 T 11-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily VSVS12_04116 7524499747461ab8de3b231b22e8d871 489 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 16 323 2.2E-95 T 11-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal VSVS12_04116 7524499747461ab8de3b231b22e8d871 489 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 16 29 - T 11-10-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 VSVS12_04116 7524499747461ab8de3b231b22e8d871 489 SMART SM00640 16 451 2.6E-109 T 11-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 VSVS12_04116 7524499747461ab8de3b231b22e8d871 489 Gene3D G3DSA:2.60.120.560 365 486 2.7E-6 T 11-10-2018 VSVS12_04116 7524499747461ab8de3b231b22e8d871 489 SUPERFAMILY SSF75005 7 328 2.1E-100 T 11-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily VSVS12_04116 7524499747461ab8de3b231b22e8d871 489 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 400 481 7.2E-5 T 11-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal VSVS12_02882 36ce5f7332caa073a858c89b244124a9 470 Gene3D G3DSA:1.10.860.10 17 180 1.6E-53 T 11-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal VSVS12_02882 36ce5f7332caa073a858c89b244124a9 470 SUPERFAMILY SSF52540 201 452 1.26E-51 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02882 36ce5f7332caa073a858c89b244124a9 470 Pfam PF03796 DnaB-like helicase C terminal domain 203 459 1.5E-113 T 11-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 VSVS12_02882 36ce5f7332caa073a858c89b244124a9 470 Pfam PF00772 DnaB-like helicase N terminal domain 24 125 2.4E-35 T 11-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 VSVS12_02882 36ce5f7332caa073a858c89b244124a9 470 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 24 461 2.2E-176 T 11-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 VSVS12_02882 36ce5f7332caa073a858c89b244124a9 470 Gene3D G3DSA:3.40.50.300 181 460 3.3E-106 T 11-10-2018 VSVS12_02882 36ce5f7332caa073a858c89b244124a9 470 SUPERFAMILY SSF48024 22 133 4.84E-37 T 11-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 VSVS12_00423 ad9bdd0f0e67855f6eecd7804113b4ee 179 Pfam PF10400 Virulence activator alpha C-term 92 176 5.9E-15 T 11-10-2018 IPR018309 Transcription regulator PadR, C-terminal VSVS12_00423 ad9bdd0f0e67855f6eecd7804113b4ee 179 Pfam PF03551 Transcriptional regulator PadR-like family 7 80 1.6E-15 T 11-10-2018 IPR005149 Transcription regulator PadR, N-terminal VSVS12_00423 ad9bdd0f0e67855f6eecd7804113b4ee 179 Gene3D G3DSA:1.10.10.10 1 89 2.9E-26 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_00423 ad9bdd0f0e67855f6eecd7804113b4ee 179 SUPERFAMILY SSF46785 3 177 3.15E-43 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_03178 75a4d4c031964550608fab9d14f456c7 234 PIRSF PIRSF028234 7 233 1.7E-87 T 11-10-2018 IPR016876 Uncharacterised conserved protein UCP028234 VSVS12_03178 75a4d4c031964550608fab9d14f456c7 234 Pfam PF12847 Methyltransferase domain 9 165 5.8E-29 T 11-10-2018 VSVS12_03178 75a4d4c031964550608fab9d14f456c7 234 Gene3D G3DSA:3.40.50.150 3 171 2.5E-50 T 11-10-2018 VSVS12_03178 75a4d4c031964550608fab9d14f456c7 234 SUPERFAMILY SSF53335 25 136 3.17E-8 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_01399 465c358ace2f761884b738eae89a90bf 654 SUPERFAMILY SSF53067 22 214 2.22E-27 T 11-10-2018 VSVS12_01399 465c358ace2f761884b738eae89a90bf 654 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 233 246 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VSVS12_01399 465c358ace2f761884b738eae89a90bf 654 Gene3D G3DSA:3.30.420.40 23 223 1.8E-34 T 11-10-2018 VSVS12_01399 465c358ace2f761884b738eae89a90bf 654 PRINTS PR00301 70kDa heat shock protein signature 239 249 5.1E-7 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VSVS12_01399 465c358ace2f761884b738eae89a90bf 654 PRINTS PR00301 70kDa heat shock protein signature 172 192 5.1E-7 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VSVS12_01399 465c358ace2f761884b738eae89a90bf 654 PRINTS PR00301 70kDa heat shock protein signature 21 34 5.1E-7 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VSVS12_01399 465c358ace2f761884b738eae89a90bf 654 Pfam PF00012 Hsp70 protein 23 347 9.7E-16 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VSVS12_01399 465c358ace2f761884b738eae89a90bf 654 SUPERFAMILY SSF53067 228 492 2.99E-24 T 11-10-2018 VSVS12_01399 465c358ace2f761884b738eae89a90bf 654 Gene3D G3DSA:3.30.420.40 226 268 1.8E-34 T 11-10-2018 VSVS12_01399 465c358ace2f761884b738eae89a90bf 654 Gene3D G3DSA:3.90.640.10 269 348 1.8E-34 T 11-10-2018 VSVS12_01399 465c358ace2f761884b738eae89a90bf 654 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 25 32 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VSVS12_04242 8093aa32ca769136b033658487108367 211 Pfam PF13743 Thioredoxin 7 183 3.4E-13 T 11-10-2018 VSVS12_04242 8093aa32ca769136b033658487108367 211 Gene3D G3DSA:3.40.30.10 3 209 5.8E-52 T 11-10-2018 VSVS12_04242 8093aa32ca769136b033658487108367 211 SUPERFAMILY SSF52833 5 208 4.99E-32 T 11-10-2018 IPR036249 Thioredoxin-like superfamily VSVS12_02558 833ba774bb9f89abeb4a1a4dc064c504 420 Pfam PF14450 Cell division protein FtsA 207 381 2.8E-24 T 11-10-2018 VSVS12_02558 833ba774bb9f89abeb4a1a4dc064c504 420 Gene3D G3DSA:3.90.640.10 235 300 2.2E-111 T 11-10-2018 VSVS12_02558 833ba774bb9f89abeb4a1a4dc064c504 420 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 420 29.189 T 11-10-2018 IPR020823 Cell division protein FtsA VSVS12_02558 833ba774bb9f89abeb4a1a4dc064c504 420 Gene3D G3DSA:3.30.420.40 197 359 2.2E-111 T 11-10-2018 VSVS12_02558 833ba774bb9f89abeb4a1a4dc064c504 420 Gene3D G3DSA:3.30.1490.110 87 169 2.2E-111 T 11-10-2018 VSVS12_02558 833ba774bb9f89abeb4a1a4dc064c504 420 SMART SM00842 10 196 2.2E-94 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 VSVS12_02558 833ba774bb9f89abeb4a1a4dc064c504 420 SUPERFAMILY SSF53067 198 384 1.3E-44 T 11-10-2018 VSVS12_02558 833ba774bb9f89abeb4a1a4dc064c504 420 SUPERFAMILY SSF53067 8 221 8.57E-59 T 11-10-2018 VSVS12_02558 833ba774bb9f89abeb4a1a4dc064c504 420 PIRSF PIRSF003101 1 420 5.5E-145 T 11-10-2018 IPR020823 Cell division protein FtsA VSVS12_02558 833ba774bb9f89abeb4a1a4dc064c504 420 Gene3D G3DSA:3.30.420.40 13 379 2.2E-111 T 11-10-2018 VSVS12_02558 833ba774bb9f89abeb4a1a4dc064c504 420 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 1.6E-149 T 11-10-2018 IPR020823 Cell division protein FtsA VSVS12_02558 833ba774bb9f89abeb4a1a4dc064c504 420 Pfam PF02491 SHS2 domain inserted in FTSA 85 161 5.1E-28 T 11-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 VSVS12_02103 4c3c4706595f96c7470bd93ce839e92b 334 Pfam PF00535 Glycosyl transferase family 2 18 180 2.2E-31 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VSVS12_02103 4c3c4706595f96c7470bd93ce839e92b 334 Gene3D G3DSA:3.90.550.10 5 197 1.9E-34 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VSVS12_02103 4c3c4706595f96c7470bd93ce839e92b 334 SUPERFAMILY SSF53448 14 190 9.0E-34 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VSVS12_01307 870ab80975d199f361486e090ddddda7 538 Gene3D G3DSA:3.40.50.2300 3 132 4.9E-21 T 11-10-2018 VSVS12_01307 870ab80975d199f361486e090ddddda7 538 Gene3D G3DSA:1.25.40.10 133 301 3.5E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_01307 870ab80975d199f361486e090ddddda7 538 SMART SM00448 7 125 2.1E-16 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_01307 870ab80975d199f361486e090ddddda7 538 SUPERFAMILY SSF48452 145 372 3.8E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_01307 870ab80975d199f361486e090ddddda7 538 SUPERFAMILY SSF52172 5 142 4.41E-23 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_01307 870ab80975d199f361486e090ddddda7 538 Pfam PF00072 Response regulator receiver domain 9 125 1.8E-15 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_01307 870ab80975d199f361486e090ddddda7 538 PIRSF PIRSF011521 1 538 7.5E-181 T 11-10-2018 IPR014460 Signal transduction response regulator, predicted, VieB VSVS12_03128 51400f45575a29e083395ac2a83b199b 126 Gene3D G3DSA:1.10.720.30 68 125 7.5E-31 T 11-10-2018 IPR036361 SAP domain superfamily VSVS12_03128 51400f45575a29e083395ac2a83b199b 126 Pfam PF09905 DNA-binding protein VF530 60 122 2.9E-35 T 11-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 VSVS12_00650 0d5ee149af7879ca9c9fa32a7dd944d1 458 SUPERFAMILY SSF88723 7 155 7.16E-14 T 11-10-2018 IPR029060 PIN-like domain superfamily VSVS12_00650 0d5ee149af7879ca9c9fa32a7dd944d1 458 Gene3D G3DSA:3.40.50.300 245 456 6.5E-65 T 11-10-2018 VSVS12_00650 0d5ee149af7879ca9c9fa32a7dd944d1 458 SUPERFAMILY SSF52540 203 439 2.41E-29 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00650 0d5ee149af7879ca9c9fa32a7dd944d1 458 Gene3D G3DSA:3.40.50.1010 3 155 7.5E-28 T 11-10-2018 VSVS12_00650 0d5ee149af7879ca9c9fa32a7dd944d1 458 Pfam PF13638 PIN domain 9 150 5.7E-35 T 11-10-2018 IPR002716 PIN domain VSVS12_00650 0d5ee149af7879ca9c9fa32a7dd944d1 458 Pfam PF02562 PhoH-like protein 248 453 1.1E-53 T 11-10-2018 IPR003714 PhoH-like protein GO:0005524 VSVS12_00650 0d5ee149af7879ca9c9fa32a7dd944d1 458 SMART SM00670 7 141 2.5E-13 T 11-10-2018 IPR002716 PIN domain VSVS12_00323 7764c2785749a607406ecadfdb374afb 238 Pfam PF03725 3' exoribonuclease family, domain 2 159 224 3.0E-10 T 11-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VSVS12_00323 7764c2785749a607406ecadfdb374afb 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 11-10-2018 IPR018336 Ribonuclease PH, conserved site VSVS12_00323 7764c2785749a607406ecadfdb374afb 238 SUPERFAMILY SSF54211 1 181 1.01E-44 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VSVS12_00323 7764c2785749a607406ecadfdb374afb 238 Hamap MF_00564 Ribonuclease PH [rph]. 11 237 43.792 T 11-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 VSVS12_00323 7764c2785749a607406ecadfdb374afb 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 4.2E-111 T 11-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 VSVS12_00323 7764c2785749a607406ecadfdb374afb 238 Gene3D G3DSA:3.30.230.70 10 238 1.0E-61 T 11-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VSVS12_00323 7764c2785749a607406ecadfdb374afb 238 SUPERFAMILY SSF55666 153 237 3.01E-24 T 11-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VSVS12_00323 7764c2785749a607406ecadfdb374afb 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 5.9E-24 T 11-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 VSVS12_02775 525d35464a5b5b3b6a9da4c5f53fcfa1 424 Gene3D G3DSA:3.30.465.10 340 418 3.8E-27 T 11-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 VSVS12_02775 525d35464a5b5b3b6a9da4c5f53fcfa1 424 Pfam PF00571 CBS domain 278 326 6.7E-6 T 11-10-2018 IPR000644 CBS domain VSVS12_02775 525d35464a5b5b3b6a9da4c5f53fcfa1 424 Pfam PF03471 Transporter associated domain 344 418 2.4E-16 T 11-10-2018 IPR005170 Transporter-associated domain VSVS12_02775 525d35464a5b5b3b6a9da4c5f53fcfa1 424 SUPERFAMILY SSF56176 340 419 4.64E-20 T 11-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 VSVS12_02775 525d35464a5b5b3b6a9da4c5f53fcfa1 424 Gene3D G3DSA:3.10.580.10 201 330 7.7E-41 T 11-10-2018 VSVS12_02775 525d35464a5b5b3b6a9da4c5f53fcfa1 424 SMART SM01091 342 420 5.7E-22 T 11-10-2018 IPR005170 Transporter-associated domain VSVS12_02775 525d35464a5b5b3b6a9da4c5f53fcfa1 424 SUPERFAMILY SSF54631 199 333 9.85E-25 T 11-10-2018 VSVS12_02775 525d35464a5b5b3b6a9da4c5f53fcfa1 424 Pfam PF01595 Domain of unknown function DUF21 13 181 3.5E-48 T 11-10-2018 IPR002550 CNNM, transmembrane domain VSVS12_02578 31352a0152954a349fbfd5ca29b04842 245 Gene3D G3DSA:1.10.760.10 27 210 3.4E-18 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VSVS12_02578 31352a0152954a349fbfd5ca29b04842 245 Pfam PF02167 Cytochrome C1 family 34 244 7.4E-18 T 11-10-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 VSVS12_02578 31352a0152954a349fbfd5ca29b04842 245 SUPERFAMILY SSF46626 16 208 3.11E-49 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VSVS12_02000 33a47f7c7348824e120ec5fedf4927f5 271 Pfam PF17131 Outer membrane lipoprotein-sorting protein 86 269 1.2E-65 T 11-10-2018 IPR033399 Putative outer membrane lipoprotein-sorting protein VSVS12_02000 33a47f7c7348824e120ec5fedf4927f5 271 Gene3D G3DSA:2.50.20.10 34 269 3.9E-94 T 11-10-2018 VSVS12_04165 1f18a809c7e9bee7da292aa7df0ca80a 134 ProSitePatterns PS00893 Nudix box signature. 34 55 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VSVS12_04165 1f18a809c7e9bee7da292aa7df0ca80a 134 Gene3D G3DSA:3.90.79.10 1 131 8.5E-20 T 11-10-2018 VSVS12_04165 1f18a809c7e9bee7da292aa7df0ca80a 134 Pfam PF00293 NUDIX domain 1 120 5.9E-17 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VSVS12_04165 1f18a809c7e9bee7da292aa7df0ca80a 134 SUPERFAMILY SSF55811 5 125 1.33E-18 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VSVS12_02596 dd5dc67ed165db88c8318302ac70aefd 444 Gene3D G3DSA:1.10.10.60 386 440 8.4E-13 T 11-10-2018 VSVS12_02596 dd5dc67ed165db88c8318302ac70aefd 444 SUPERFAMILY SSF52540 146 380 1.54E-48 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02596 dd5dc67ed165db88c8318302ac70aefd 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 402 419 6.7E-5 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VSVS12_02596 dd5dc67ed165db88c8318302ac70aefd 444 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 419 439 6.7E-5 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VSVS12_02596 dd5dc67ed165db88c8318302ac70aefd 444 Gene3D G3DSA:3.40.50.300 137 310 1.6E-41 T 11-10-2018 VSVS12_02596 dd5dc67ed165db88c8318302ac70aefd 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 352 361 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VSVS12_02596 dd5dc67ed165db88c8318302ac70aefd 444 SUPERFAMILY SSF46689 352 438 5.08E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_02596 dd5dc67ed165db88c8318302ac70aefd 444 Pfam PF00158 Sigma-54 interaction domain 146 305 5.5E-40 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VSVS12_02596 dd5dc67ed165db88c8318302ac70aefd 444 SUPERFAMILY SSF52172 27 190 1.02E-8 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_02596 dd5dc67ed165db88c8318302ac70aefd 444 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 170 183 - T 11-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 VSVS12_02596 dd5dc67ed165db88c8318302ac70aefd 444 Gene3D G3DSA:1.10.8.60 312 382 8.1E-23 T 11-10-2018 VSVS12_02596 dd5dc67ed165db88c8318302ac70aefd 444 SMART SM00382 166 303 7.9E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_02596 dd5dc67ed165db88c8318302ac70aefd 444 Pfam PF02954 Bacterial regulatory protein, Fis family 396 435 1.6E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VSVS12_02784 1f1df46e13eb75f0f4198c1bcb2f2d3d 267 Pfam PF02673 Bacitracin resistance protein BacA 6 258 1.5E-82 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 VSVS12_02784 1f1df46e13eb75f0f4198c1bcb2f2d3d 267 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 264 17.626 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 VSVS12_02784 1f1df46e13eb75f0f4198c1bcb2f2d3d 267 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 6 257 2.5E-74 T 11-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 VSVS12_02529 4d50327406e700a8d79315c40200666f 279 Gene3D G3DSA:1.10.150.210 115 177 7.2E-144 T 11-10-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 VSVS12_02529 4d50327406e700a8d79315c40200666f 279 SUPERFAMILY SSF56784 104 275 1.65E-41 T 11-10-2018 IPR036412 HAD-like superfamily VSVS12_02529 4d50327406e700a8d79315c40200666f 279 Pfam PF00702 haloacid dehalogenase-like hydrolase 107 275 3.0E-13 T 11-10-2018 VSVS12_02529 4d50327406e700a8d79315c40200666f 279 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 107 275 2.1E-25 T 11-10-2018 VSVS12_02529 4d50327406e700a8d79315c40200666f 279 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 100 275 1.1E-72 T 11-10-2018 VSVS12_02529 4d50327406e700a8d79315c40200666f 279 Gene3D G3DSA:3.40.50.1000 2 276 7.2E-144 T 11-10-2018 IPR023214 HAD superfamily VSVS12_02529 4d50327406e700a8d79315c40200666f 279 Gene3D G3DSA:3.30.70.2020 8 100 7.2E-144 T 11-10-2018 VSVS12_00970 a8a14a1f7d3eb7d62578b6f5e49b6cd4 248 Pfam PF13144 Chaperone for flagella basal body P-ring formation 49 246 3.1E-51 T 11-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal VSVS12_00970 a8a14a1f7d3eb7d62578b6f5e49b6cd4 248 Gene3D G3DSA:2.30.30.760 188 247 1.6E-11 T 11-10-2018 VSVS12_00970 a8a14a1f7d3eb7d62578b6f5e49b6cd4 248 SMART SM00858 126 188 2.5E-6 T 11-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 VSVS12_00970 a8a14a1f7d3eb7d62578b6f5e49b6cd4 248 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 114 246 3.7E-39 T 11-10-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal VSVS12_02263 dbf6609b8c8ebdc894700389b63b2707 76 Pfam PF09012 FeoC like transcriptional regulator 2 53 1.6E-12 T 11-10-2018 IPR015102 Transcriptional regulator HTH-type, FeoC VSVS12_02263 dbf6609b8c8ebdc894700389b63b2707 76 SUPERFAMILY SSF46785 1 53 3.99E-12 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_01709 5ed17ffd52b11ff49d17916c4bb7cac0 553 Gene3D G3DSA:3.30.70.20 415 520 7.4E-12 T 11-10-2018 VSVS12_01709 5ed17ffd52b11ff49d17916c4bb7cac0 553 Gene3D G3DSA:3.30.70.20 176 254 5.1E-12 T 11-10-2018 VSVS12_01709 5ed17ffd52b11ff49d17916c4bb7cac0 553 SUPERFAMILY SSF54862 141 504 1.53E-37 T 11-10-2018 VSVS12_01709 5ed17ffd52b11ff49d17916c4bb7cac0 553 Pfam PF00037 4Fe-4S binding domain 419 435 1.5E-4 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VSVS12_01709 5ed17ffd52b11ff49d17916c4bb7cac0 553 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 451 462 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VSVS12_01709 5ed17ffd52b11ff49d17916c4bb7cac0 553 Pfam PF12838 4Fe-4S dicluster domain 185 231 5.2E-9 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VSVS12_01709 5ed17ffd52b11ff49d17916c4bb7cac0 553 Pfam PF12838 4Fe-4S dicluster domain 451 497 2.2E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VSVS12_00113 b8c2921303b7008494914e2496acf09a 494 Gene3D G3DSA:1.10.1040.10 209 494 5.4E-119 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VSVS12_00113 b8c2921303b7008494914e2496acf09a 494 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 22 488 36.9 T 11-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 VSVS12_00113 b8c2921303b7008494914e2496acf09a 494 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 367 1.4E-124 T 11-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 VSVS12_00113 b8c2921303b7008494914e2496acf09a 494 SUPERFAMILY SSF48179 210 341 3.06E-39 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VSVS12_00113 b8c2921303b7008494914e2496acf09a 494 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 7.5E-60 T 11-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 VSVS12_00113 b8c2921303b7008494914e2496acf09a 494 SUPERFAMILY SSF48179 348 487 4.76E-41 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VSVS12_00113 b8c2921303b7008494914e2496acf09a 494 SUPERFAMILY SSF51735 28 209 6.66E-58 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_00113 b8c2921303b7008494914e2496acf09a 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 355 485 5.7E-16 T 11-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 VSVS12_00113 b8c2921303b7008494914e2496acf09a 494 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 341 5.1E-26 T 11-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 VSVS12_00113 b8c2921303b7008494914e2496acf09a 494 Gene3D G3DSA:3.40.50.720 1 208 5.1E-86 T 11-10-2018 VSVS12_00849 7c1a736cf3fcc67e78b775a9f61da50e 129 Pfam PF07417 Transcriptional regulator Crl 6 123 9.0E-47 T 11-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 VSVS12_00849 7c1a736cf3fcc67e78b775a9f61da50e 129 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 4 129 29.885 T 11-10-2018 IPR009986 Sigma factor-binding protein Crl GO:0045893 VSVS12_00849 7c1a736cf3fcc67e78b775a9f61da50e 129 Gene3D G3DSA:3.30.310.230 2 128 3.4E-45 T 11-10-2018 IPR038208 Sigma factor-binding protein Crl superfamily GO:0045893 VSVS12_00116 2b067c9343115b027803cff647e35150 162 Pfam PF10675 Protein of unknown function (DUF2489) 14 146 1.3E-44 T 11-10-2018 IPR019617 Domain of unknown function DUF2489 VSVS12_04517 d2d55265dac6fd80020f671355ce0615 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 281 1.4E-12 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VSVS12_04517 d2d55265dac6fd80020f671355ce0615 289 Gene3D G3DSA:1.10.3720.10 19 282 1.3E-35 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_04517 d2d55265dac6fd80020f671355ce0615 289 SUPERFAMILY SSF161098 51 269 2.88E-39 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_04391 d2d55265dac6fd80020f671355ce0615 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 281 1.4E-12 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VSVS12_04391 d2d55265dac6fd80020f671355ce0615 289 Gene3D G3DSA:1.10.3720.10 19 282 1.3E-35 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_04391 d2d55265dac6fd80020f671355ce0615 289 SUPERFAMILY SSF161098 51 269 2.88E-39 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_01538 8eabf19ed2927ff1a74cf4ecf1203f6c 422 Pfam PF06097 Bacterial protein of unknown function (DUF945) 8 413 1.1E-40 T 11-10-2018 IPR010352 Protein of unknown function DUF945 VSVS12_00687 d9e2c75a5c059eb4600d8b0c4b177e36 760 SUPERFAMILY SSF52151 30 325 1.36E-56 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VSVS12_00687 d9e2c75a5c059eb4600d8b0c4b177e36 760 Gene3D G3DSA:3.40.1090.10 139 280 3.7E-17 T 11-10-2018 VSVS12_00687 d9e2c75a5c059eb4600d8b0c4b177e36 760 Gene3D G3DSA:3.40.1090.10 16 123 3.0E-28 T 11-10-2018 VSVS12_00687 d9e2c75a5c059eb4600d8b0c4b177e36 760 Pfam PF07244 Surface antigen variable number repeat 346 415 4.5E-5 T 11-10-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 VSVS12_00687 d9e2c75a5c059eb4600d8b0c4b177e36 760 Gene3D G3DSA:3.10.20.310 334 419 1.9E-6 T 11-10-2018 VSVS12_00687 d9e2c75a5c059eb4600d8b0c4b177e36 760 Pfam PF01734 Patatin-like phospholipase 36 226 5.9E-29 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 VSVS12_01396 f3002c88b2bd7ddf42950b13b7b20865 206 SUPERFAMILY SSF52833 27 204 5.23E-42 T 11-10-2018 IPR036249 Thioredoxin-like superfamily VSVS12_01396 f3002c88b2bd7ddf42950b13b7b20865 206 PIRSF PIRSF001488 1 206 2.4E-52 T 11-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL VSVS12_01396 f3002c88b2bd7ddf42950b13b7b20865 206 ProSitePatterns PS00194 Thioredoxin family active site. 48 66 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VSVS12_01396 f3002c88b2bd7ddf42950b13b7b20865 206 Gene3D G3DSA:3.40.30.10 26 206 1.6E-46 T 11-10-2018 VSVS12_01396 f3002c88b2bd7ddf42950b13b7b20865 206 Pfam PF01323 DSBA-like thioredoxin domain 47 186 6.0E-20 T 11-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 VSVS12_03059 ab5908f7e0339cbac387b079f1e3ef1c 143 SUPERFAMILY SSF47175 23 141 1.47E-27 T 11-10-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 VSVS12_03059 ab5908f7e0339cbac387b079f1e3ef1c 143 Gene3D G3DSA:1.20.120.10 19 141 9.7E-26 T 11-10-2018 VSVS12_03059 ab5908f7e0339cbac387b079f1e3ef1c 143 Pfam PF01322 Cytochrome C' 24 140 1.5E-23 T 11-10-2018 IPR002321 Cytochrome c, class II GO:0005506|GO:0009055|GO:0020037 VSVS12_02151 0057ba56da61d0021c9aedbdb32325cb 205 Pfam PF01330 RuvA N terminal domain 2 62 1.3E-20 T 11-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 VSVS12_02151 0057ba56da61d0021c9aedbdb32325cb 205 SUPERFAMILY SSF50249 2 63 9.14E-19 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_02151 0057ba56da61d0021c9aedbdb32325cb 205 SMART SM00278 108 127 0.071 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VSVS12_02151 0057ba56da61d0021c9aedbdb32325cb 205 SMART SM00278 73 92 540.0 T 11-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 VSVS12_02151 0057ba56da61d0021c9aedbdb32325cb 205 Pfam PF14520 Helix-hairpin-helix domain 72 130 1.8E-14 T 11-10-2018 VSVS12_02151 0057ba56da61d0021c9aedbdb32325cb 205 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 205 31.429 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 VSVS12_02151 0057ba56da61d0021c9aedbdb32325cb 205 SUPERFAMILY SSF47781 66 137 4.28E-19 T 11-10-2018 IPR010994 RuvA domain 2-like VSVS12_02151 0057ba56da61d0021c9aedbdb32325cb 205 Gene3D G3DSA:1.10.150.20 67 143 5.3E-25 T 11-10-2018 VSVS12_02151 0057ba56da61d0021c9aedbdb32325cb 205 Pfam PF07499 RuvA, C-terminal domain 161 204 4.6E-16 T 11-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 VSVS12_02151 0057ba56da61d0021c9aedbdb32325cb 205 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 204 6.4E-63 T 11-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 VSVS12_02151 0057ba56da61d0021c9aedbdb32325cb 205 Gene3D G3DSA:2.40.50.140 1 65 1.7E-27 T 11-10-2018 VSVS12_02151 0057ba56da61d0021c9aedbdb32325cb 205 Gene3D G3DSA:1.10.8.10 158 205 2.7E-21 T 11-10-2018 VSVS12_02151 0057ba56da61d0021c9aedbdb32325cb 205 SUPERFAMILY SSF46929 159 204 6.02E-12 T 11-10-2018 IPR036267 RuvA, C-terminal domain superfamily VSVS12_02001 a5ec94526b27fbb69ebcecb3169a1708 787 PRINTS PR00702 Acriflavin resistance protein family signature 608 631 1.9E-5 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_02001 a5ec94526b27fbb69ebcecb3169a1708 787 PRINTS PR00702 Acriflavin resistance protein family signature 738 761 1.9E-5 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_02001 a5ec94526b27fbb69ebcecb3169a1708 787 PRINTS PR00702 Acriflavin resistance protein family signature 663 687 1.9E-5 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_02001 a5ec94526b27fbb69ebcecb3169a1708 787 PRINTS PR00702 Acriflavin resistance protein family signature 247 271 1.9E-5 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_02001 a5ec94526b27fbb69ebcecb3169a1708 787 SUPERFAMILY SSF82866 158 379 9.94E-30 T 11-10-2018 VSVS12_02001 a5ec94526b27fbb69ebcecb3169a1708 787 Gene3D G3DSA:1.20.1640.10 582 771 1.3E-14 T 11-10-2018 VSVS12_02001 a5ec94526b27fbb69ebcecb3169a1708 787 Gene3D G3DSA:1.20.1640.10 204 393 2.4E-11 T 11-10-2018 VSVS12_02001 a5ec94526b27fbb69ebcecb3169a1708 787 Pfam PF03176 MMPL family 105 379 1.8E-20 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 VSVS12_02001 a5ec94526b27fbb69ebcecb3169a1708 787 Pfam PF03176 MMPL family 591 763 1.2E-11 T 11-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 VSVS12_02001 a5ec94526b27fbb69ebcecb3169a1708 787 SUPERFAMILY SSF82866 597 766 5.62E-32 T 11-10-2018 VSVS12_00287 10aa648c86b733e6a52b18db9089ca34 128 SMART SM00363 8 71 4.7E-11 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00287 10aa648c86b733e6a52b18db9089ca34 128 Pfam PF01479 S4 domain 8 53 6.2E-13 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00287 10aa648c86b733e6a52b18db9089ca34 128 Gene3D G3DSA:3.10.290.10 3 107 7.9E-38 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VSVS12_00287 10aa648c86b733e6a52b18db9089ca34 128 PIRSF PIRSF016821 5 128 1.9E-41 T 11-10-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 VSVS12_00287 10aa648c86b733e6a52b18db9089ca34 128 SUPERFAMILY SSF55174 7 105 3.53E-31 T 11-10-2018 VSVS12_01352 1f1bf0e1a15076a662eb1819ce17c558 129 Pfam PF07233 Protein of unknown function (DUF1425) 35 125 1.3E-26 T 11-10-2018 IPR010824 Protein of unknown function DUF1425 VSVS12_01352 1f1bf0e1a15076a662eb1819ce17c558 129 Gene3D G3DSA:2.60.40.3230 18 128 4.2E-28 T 11-10-2018 IPR038483 YcfL-like superfamily VSVS12_01918 60b2459f1fe0fa23fa1df236a103ac00 148 Pfam PF00270 DEAD/DEAH box helicase 17 121 9.4E-8 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VSVS12_01918 60b2459f1fe0fa23fa1df236a103ac00 148 SMART SM00487 2 148 0.0056 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VSVS12_01918 60b2459f1fe0fa23fa1df236a103ac00 148 SUPERFAMILY SSF52540 19 135 2.7E-23 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01918 60b2459f1fe0fa23fa1df236a103ac00 148 Gene3D G3DSA:3.40.50.300 1 141 2.9E-40 T 11-10-2018 VSVS12_02388 bdb75720bc0002c1816ae2e75833038c 289 Pfam PF01963 TraB family 23 276 3.8E-52 T 11-10-2018 IPR002816 Pheromone shutdown, TraB VSVS12_00115 a38dc75b6fbd3fa7ec73e047908ed25a 462 SMART SM00729 57 277 3.7E-54 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VSVS12_00115 a38dc75b6fbd3fa7ec73e047908ed25a 462 Gene3D G3DSA:3.80.30.20 6 368 1.7E-137 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VSVS12_00115 a38dc75b6fbd3fa7ec73e047908ed25a 462 SUPERFAMILY SSF102114 11 449 3.01E-146 T 11-10-2018 VSVS12_00115 a38dc75b6fbd3fa7ec73e047908ed25a 462 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 13 462 3.5E-207 T 11-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 VSVS12_00115 a38dc75b6fbd3fa7ec73e047908ed25a 462 Gene3D G3DSA:1.10.10.920 369 462 3.7E-34 T 11-10-2018 VSVS12_00115 a38dc75b6fbd3fa7ec73e047908ed25a 462 PIRSF PIRSF000167 8 459 4.7E-171 T 11-10-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 KEGG: 00860+1.3.98.3|MetaCyc: PWY-5531 VSVS12_00115 a38dc75b6fbd3fa7ec73e047908ed25a 462 Pfam PF06969 HemN C-terminal domain 368 436 3.6E-12 T 11-10-2018 IPR010723 HemN, C-terminal VSVS12_00115 a38dc75b6fbd3fa7ec73e047908ed25a 462 Pfam PF04055 Radical SAM superfamily 62 233 1.6E-19 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VSVS12_01027 821f8a9ffea2d16ca28160f1132906b3 258 Pfam PF01863 Protein of unknown function DUF45 38 249 3.0E-55 T 11-10-2018 IPR002725 Protein of unknown function DUF45 VSVS12_01027 821f8a9ffea2d16ca28160f1132906b3 258 Gene3D G3DSA:3.30.2010.10 160 254 1.9E-20 T 11-10-2018 VSVS12_03606 b82708ed3426fb372a1bbc56ee13596d 481 SUPERFAMILY SSF53300 320 474 1.0E-24 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VSVS12_03606 b82708ed3426fb372a1bbc56ee13596d 481 Gene3D G3DSA:3.40.50.410 322 467 2.4E-7 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VSVS12_03606 b82708ed3426fb372a1bbc56ee13596d 481 SMART SM00327 320 479 5.7E-4 T 11-10-2018 IPR002035 von Willebrand factor, type A VSVS12_03606 b82708ed3426fb372a1bbc56ee13596d 481 Pfam PF05762 VWA domain containing CoxE-like protein 317 450 8.3E-11 T 11-10-2018 IPR008912 Uncharacterised protein family CoxE-like VSVS12_03491 065bf1c9c7440136036372b65947371d 356 Pfam PF12060 Domain of unknown function (DUF3541) 26 248 1.2E-113 T 11-10-2018 IPR021928 Protein of unknown function DUF3541 VSVS12_04298 804156120cb78e76bdd719961b057a8c 195 Pfam PF01810 LysE type translocator 17 189 1.0E-16 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VSVS12_02227 9353b862451b77c60a2600c16da8ba2f 364 Gene3D G3DSA:3.60.40.10 164 348 3.0E-7 T 11-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 VSVS12_02227 9353b862451b77c60a2600c16da8ba2f 364 Gene3D G3DSA:3.40.50.2300 12 143 7.6E-35 T 11-10-2018 VSVS12_02227 9353b862451b77c60a2600c16da8ba2f 364 Pfam PF00072 Response regulator receiver domain 22 132 9.8E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_02227 9353b862451b77c60a2600c16da8ba2f 364 SMART SM00448 20 132 1.2E-31 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_02227 9353b862451b77c60a2600c16da8ba2f 364 SUPERFAMILY SSF52172 18 137 1.15E-34 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_01592 05334c97caa81ba9df35c2100b942648 391 Hamap MF_01643 Formate-dependent phosphoribosylglycinamide formyltransferase [purT]. 6 390 51.199 T 11-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 VSVS12_01592 05334c97caa81ba9df35c2100b942648 391 SUPERFAMILY SSF56059 111 312 8.84E-55 T 11-10-2018 VSVS12_01592 05334c97caa81ba9df35c2100b942648 391 Gene3D G3DSA:3.30.1490.20 121 194 2.4E-31 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VSVS12_01592 05334c97caa81ba9df35c2100b942648 391 Gene3D G3DSA:3.30.470.20 195 389 1.7E-59 T 11-10-2018 VSVS12_01592 05334c97caa81ba9df35c2100b942648 391 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 12 389 3.2E-187 T 11-10-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 VSVS12_01592 05334c97caa81ba9df35c2100b942648 391 Gene3D G3DSA:3.40.50.20 1 120 1.7E-52 T 11-10-2018 VSVS12_01592 05334c97caa81ba9df35c2100b942648 391 Pfam PF02222 ATP-grasp domain 121 292 1.0E-54 T 11-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type VSVS12_01592 05334c97caa81ba9df35c2100b942648 391 SUPERFAMILY SSF52440 2 110 1.58E-34 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VSVS12_01592 05334c97caa81ba9df35c2100b942648 391 SUPERFAMILY SSF51246 317 389 8.16E-19 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 VSVS12_03824 2cf17850593c26d51b99a36a0e83edf3 353 SUPERFAMILY SSF52096 31 334 1.99E-21 T 11-10-2018 IPR029045 ClpP/crotonase-like domain superfamily VSVS12_03824 2cf17850593c26d51b99a36a0e83edf3 353 Gene3D G3DSA:3.90.226.10 110 351 1.3E-12 T 11-10-2018 VSVS12_03824 2cf17850593c26d51b99a36a0e83edf3 353 Pfam PF03572 Peptidase family S41 122 330 2.2E-11 T 11-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 VSVS12_00395 a1bd8329a4d70a369b5c554073457917 335 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 334 1.3E-138 T 11-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 VSVS12_00395 a1bd8329a4d70a369b5c554073457917 335 Gene3D G3DSA:3.40.50.720 3 273 1.4E-138 T 11-10-2018 VSVS12_00395 a1bd8329a4d70a369b5c554073457917 335 Gene3D G3DSA:3.90.25.10 193 328 1.4E-138 T 11-10-2018 VSVS12_00395 a1bd8329a4d70a369b5c554073457917 335 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 1.3E-60 T 11-10-2018 IPR016040 NAD(P)-binding domain VSVS12_00395 a1bd8329a4d70a369b5c554073457917 335 SUPERFAMILY SSF51735 1 334 1.17E-95 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_00864 ce7b0cfb1eea82946fa0ec9e84c5161f 292 Gene3D G3DSA:3.90.230.10 1 290 3.2E-100 T 11-10-2018 VSVS12_00864 ce7b0cfb1eea82946fa0ec9e84c5161f 292 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 197 215 - T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 VSVS12_00864 ce7b0cfb1eea82946fa0ec9e84c5161f 292 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 279 2.4E-81 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 VSVS12_00864 ce7b0cfb1eea82946fa0ec9e84c5161f 292 Hamap MF_01974 Methionine aminopeptidase [map]. 3 280 40.004 T 11-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 VSVS12_00864 ce7b0cfb1eea82946fa0ec9e84c5161f 292 SUPERFAMILY SSF55920 3 282 7.33E-80 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like VSVS12_00864 ce7b0cfb1eea82946fa0ec9e84c5161f 292 Pfam PF00557 Metallopeptidase family M24 12 271 4.5E-45 T 11-10-2018 IPR000994 Peptidase M24 VSVS12_01223 32211443edc82f5e775e583c8e533c06 643 SUPERFAMILY SSF52540 42 602 4.12E-11 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01223 32211443edc82f5e775e583c8e533c06 643 SUPERFAMILY SSF52540 14 235 1.08E-23 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01223 32211443edc82f5e775e583c8e533c06 643 SMART SM00491 477 606 9.0E-47 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VSVS12_01223 32211443edc82f5e775e583c8e533c06 643 SMART SM00487 17 302 0.0056 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VSVS12_01223 32211443edc82f5e775e583c8e533c06 643 Gene3D G3DSA:3.40.50.300 443 633 3.0E-37 T 11-10-2018 VSVS12_01223 32211443edc82f5e775e583c8e533c06 643 Pfam PF13307 Helicase C-terminal domain 462 619 1.7E-34 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VSVS12_01223 32211443edc82f5e775e583c8e533c06 643 Gene3D G3DSA:3.40.50.300 19 287 2.6E-49 T 11-10-2018 VSVS12_03124 97a5d8ef9bb9b6a89dc3d33d99a5800d 219 SUPERFAMILY SSF52777 2 213 1.74E-49 T 11-10-2018 VSVS12_03124 97a5d8ef9bb9b6a89dc3d33d99a5800d 219 Pfam PF00302 Chloramphenicol acetyltransferase 3 207 3.6E-28 T 11-10-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 VSVS12_03124 97a5d8ef9bb9b6a89dc3d33d99a5800d 219 SMART SM01059 1 207 5.7E-64 T 11-10-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 VSVS12_03124 97a5d8ef9bb9b6a89dc3d33d99a5800d 219 ProDom PD002660 TRANSFERASE CHLORAMPHENICOL ACYLTRANSFERASE ACETYLTRANSFERASE ANTIBIOTIC RESISTANCE PLASMID CAT O-ACETYLTRANSFERASE DIRECT 11 207 1.0E-38 T 11-10-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 VSVS12_03124 97a5d8ef9bb9b6a89dc3d33d99a5800d 219 Gene3D G3DSA:3.30.559.10 1 213 2.5E-63 T 11-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 VSVS12_04162 cc14c545c008cac78010fa724a33f0e2 351 Gene3D G3DSA:1.10.10.60 248 350 6.4E-14 T 11-10-2018 VSVS12_04162 cc14c545c008cac78010fa724a33f0e2 351 SUPERFAMILY SSF46689 303 347 1.57E-6 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_04162 cc14c545c008cac78010fa724a33f0e2 351 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 46 210 5.5E-13 T 11-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal VSVS12_04162 cc14c545c008cac78010fa724a33f0e2 351 SMART SM00342 263 344 2.0E-8 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VSVS12_04162 cc14c545c008cac78010fa724a33f0e2 351 Pfam PF12833 Helix-turn-helix domain 271 346 6.8E-11 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VSVS12_01194 bf8485590d5cefb87a7cde1bd2f79c43 104 Pfam PF12836 Helix-hairpin-helix motif 42 102 5.6E-19 T 11-10-2018 VSVS12_01194 bf8485590d5cefb87a7cde1bd2f79c43 104 Gene3D G3DSA:1.10.150.280 30 102 1.4E-20 T 11-10-2018 VSVS12_01194 bf8485590d5cefb87a7cde1bd2f79c43 104 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 41 102 1.4E-23 T 11-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain VSVS12_01194 bf8485590d5cefb87a7cde1bd2f79c43 104 SUPERFAMILY SSF47781 25 101 2.0E-24 T 11-10-2018 IPR010994 RuvA domain 2-like VSVS12_03496 1eac8977cd740f311bcad2e1a538a216 397 Pfam PF01610 Transposase 149 388 1.6E-63 T 11-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain VSVS12_03496 1eac8977cd740f311bcad2e1a538a216 397 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 84 130 3.1E-11 T 11-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain VSVS12_01514 d04343cefd33b2a65db07f1e11860620 321 Pfam PF02169 LPP20 lipoprotein 37 110 4.3E-5 T 11-10-2018 IPR024952 Lipoprotein LPP20-like VSVS12_01514 d04343cefd33b2a65db07f1e11860620 321 Gene3D G3DSA:3.10.28.20 35 138 1.0E-9 T 11-10-2018 VSVS12_00390 deeb732b18695dbee6673ce2fda8dcd4 546 Pfam PF07940 Heparinase II/III-like protein 322 537 3.2E-46 T 11-10-2018 IPR012480 Heparinase II/III-like GO:0016829 VSVS12_00390 deeb732b18695dbee6673ce2fda8dcd4 546 SUPERFAMILY SSF48230 112 309 1.37E-13 T 11-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 VSVS12_00390 deeb732b18695dbee6673ce2fda8dcd4 546 Gene3D G3DSA:1.50.10.100 28 309 9.6E-46 T 11-10-2018 IPR008929 Chondroitin AC/alginate lyase Reactome: R-HSA-2022923 VSVS12_00390 deeb732b18695dbee6673ce2fda8dcd4 546 Pfam PF16889 Heparinase II/III N-terminus 114 288 1.2E-14 T 11-10-2018 IPR031680 Heparin-sulfate lyase, N-terminal MetaCyc: PWY-7651 VSVS12_00390 deeb732b18695dbee6673ce2fda8dcd4 546 Gene3D G3DSA:2.70.98.70 329 507 2.8E-24 T 11-10-2018 VSVS12_00441 ddddf08129114c6bbd73df35377fbaac 172 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 11-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 VSVS12_00441 ddddf08129114c6bbd73df35377fbaac 172 SUPERFAMILY SSF52540 4 169 1.75E-32 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00441 ddddf08129114c6bbd73df35377fbaac 172 Gene3D G3DSA:3.40.50.300 1 172 2.2E-56 T 11-10-2018 VSVS12_00441 ddddf08129114c6bbd73df35377fbaac 172 PRINTS PR01100 Shikimate kinase family signature 7 22 2.7E-29 T 11-10-2018 VSVS12_00441 ddddf08129114c6bbd73df35377fbaac 172 PRINTS PR01100 Shikimate kinase family signature 31 44 2.7E-29 T 11-10-2018 VSVS12_00441 ddddf08129114c6bbd73df35377fbaac 172 PRINTS PR01100 Shikimate kinase family signature 59 67 2.7E-29 T 11-10-2018 VSVS12_00441 ddddf08129114c6bbd73df35377fbaac 172 PRINTS PR01100 Shikimate kinase family signature 98 115 2.7E-29 T 11-10-2018 VSVS12_00441 ddddf08129114c6bbd73df35377fbaac 172 PRINTS PR01100 Shikimate kinase family signature 77 86 2.7E-29 T 11-10-2018 VSVS12_00441 ddddf08129114c6bbd73df35377fbaac 172 Hamap MF_00109 Shikimate kinase [aroK]. 4 170 29.814 T 11-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 VSVS12_00441 ddddf08129114c6bbd73df35377fbaac 172 Pfam PF01202 Shikimate kinase 13 169 9.2E-58 T 11-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 VSVS12_00699 f41c7289a66978e7fbdea7ee6f087f5f 186 Gene3D G3DSA:3.40.50.880 1 186 4.9E-49 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like VSVS12_00699 f41c7289a66978e7fbdea7ee6f087f5f 186 SUPERFAMILY SSF52317 1 185 3.87E-46 T 11-10-2018 IPR029062 Class I glutamine amidotransferase-like VSVS12_00699 f41c7289a66978e7fbdea7ee6f087f5f 186 Pfam PF01965 DJ-1/PfpI family 2 181 6.1E-49 T 11-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 VSVS12_00699 f41c7289a66978e7fbdea7ee6f087f5f 186 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 3 185 7.2E-55 T 11-10-2018 IPR006286 Deglycase PfpI VSVS12_02447 92a31e71b7c6febef4b2960d46994686 386 Gene3D G3DSA:2.130.10.10 18 385 2.6E-98 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VSVS12_02447 92a31e71b7c6febef4b2960d46994686 386 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 8 382 4.6E-139 T 11-10-2018 IPR017687 Outer membrane protein assembly factor BamB VSVS12_02447 92a31e71b7c6febef4b2960d46994686 386 Pfam PF13360 PQQ-like domain 76 310 2.7E-54 T 11-10-2018 IPR002372 Pyrrolo-quinoline quinone repeat VSVS12_02447 92a31e71b7c6febef4b2960d46994686 386 SUPERFAMILY SSF50998 33 376 1.65E-82 T 11-10-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily VSVS12_02447 92a31e71b7c6febef4b2960d46994686 386 SMART SM00564 192 223 160.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VSVS12_02447 92a31e71b7c6febef4b2960d46994686 386 SMART SM00564 107 138 0.005 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VSVS12_02447 92a31e71b7c6febef4b2960d46994686 386 SMART SM00564 243 274 4.6 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VSVS12_02447 92a31e71b7c6febef4b2960d46994686 386 SMART SM00564 279 312 11.0 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VSVS12_02447 92a31e71b7c6febef4b2960d46994686 386 SMART SM00564 147 178 0.085 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VSVS12_02447 92a31e71b7c6febef4b2960d46994686 386 SMART SM00564 63 94 6.8E-5 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VSVS12_02447 92a31e71b7c6febef4b2960d46994686 386 SMART SM00564 322 353 0.19 T 11-10-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat VSVS12_02447 92a31e71b7c6febef4b2960d46994686 386 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 3 384 40.824 T 11-10-2018 IPR017687 Outer membrane protein assembly factor BamB VSVS12_02979 1d66ae2c032d327b535218940e9f7c79 149 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 6 145 5.6E-65 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VSVS12_02979 1d66ae2c032d327b535218940e9f7c79 149 SUPERFAMILY SSF52304 4 146 6.67E-62 T 11-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VSVS12_02979 1d66ae2c032d327b535218940e9f7c79 149 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 149 74.553 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VSVS12_02979 1d66ae2c032d327b535218940e9f7c79 149 PIRSF PIRSF001399 3 149 9.8E-60 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VSVS12_02979 1d66ae2c032d327b535218940e9f7c79 149 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 21 149 1.0E-60 T 11-10-2018 VSVS12_02979 1d66ae2c032d327b535218940e9f7c79 149 ProSitePatterns PS01029 Dehydroquinase class II signature. 10 27 - T 11-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VSVS12_02979 1d66ae2c032d327b535218940e9f7c79 149 Gene3D G3DSA:3.40.50.9100 1 149 1.2E-65 T 11-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VSVS12_02979 1d66ae2c032d327b535218940e9f7c79 149 Pfam PF01220 Dehydroquinase class II 6 142 4.1E-61 T 11-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 VSVS12_02494 58a73579d71cbb312b60f215d2354fd7 545 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 35 544 3.5E-262 T 11-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VSVS12_02494 58a73579d71cbb312b60f215d2354fd7 545 ProSitePatterns PS00510 Malate synthase signature. 278 293 - T 11-10-2018 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VSVS12_02494 58a73579d71cbb312b60f215d2354fd7 545 Gene3D G3DSA:3.20.20.360 14 423 9.7E-187 T 11-10-2018 VSVS12_02494 58a73579d71cbb312b60f215d2354fd7 545 Gene3D G3DSA:1.20.1220.12 424 545 7.0E-50 T 11-10-2018 VSVS12_02494 58a73579d71cbb312b60f215d2354fd7 545 Pfam PF01274 Malate synthase 26 544 2.4E-200 T 11-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VSVS12_02494 58a73579d71cbb312b60f215d2354fd7 545 PIRSF PIRSF001363 14 545 2.6E-250 T 11-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VSVS12_02494 58a73579d71cbb312b60f215d2354fd7 545 SUPERFAMILY SSF51645 25 544 5.89E-185 T 11-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 VSVS12_00879 1b9d094f244ca9528f2e7ae87de8148a 209 Pfam PF01351 Ribonuclease HII 25 201 3.9E-37 T 11-10-2018 IPR024567 Ribonuclease HII/HIII domain VSVS12_00879 1b9d094f244ca9528f2e7ae87de8148a 209 Gene3D G3DSA:3.30.420.10 3 208 5.7E-79 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VSVS12_00879 1b9d094f244ca9528f2e7ae87de8148a 209 Hamap MF_00052_B Ribonuclease HII [rnhB]. 23 202 37.882 T 11-10-2018 IPR022898 Ribonuclease HII GO:0004523 VSVS12_00879 1b9d094f244ca9528f2e7ae87de8148a 209 SUPERFAMILY SSF53098 17 207 1.11E-70 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_01585 7d24e6a92518f7034fa432f4d04cf351 332 Pfam PF00491 Arginase family 46 325 3.7E-62 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 VSVS12_01585 7d24e6a92518f7034fa432f4d04cf351 332 SUPERFAMILY SSF52768 13 329 8.28E-86 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily VSVS12_01585 7d24e6a92518f7034fa432f4d04cf351 332 Gene3D G3DSA:3.40.800.10 5 332 7.5E-129 T 11-10-2018 VSVS12_01585 7d24e6a92518f7034fa432f4d04cf351 332 PIRSF PIRSF036979 24 332 1.5E-28 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 VSVS12_01585 7d24e6a92518f7034fa432f4d04cf351 332 ProSitePatterns PS01053 Arginase family signature. 255 276 - T 11-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 VSVS12_01585 7d24e6a92518f7034fa432f4d04cf351 332 PRINTS PR00116 Arginase signature 252 281 5.7E-5 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 VSVS12_01585 7d24e6a92518f7034fa432f4d04cf351 332 PRINTS PR00116 Arginase signature 125 140 5.7E-5 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 VSVS12_01585 7d24e6a92518f7034fa432f4d04cf351 332 Hamap MF_00737 Formimidoylglutamase [hutG]. 8 327 42.469 T 11-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 VSVS12_01585 7d24e6a92518f7034fa432f4d04cf351 332 TIGRFAM TIGR01227 hutG: formimidoylglutamase 13 327 2.3E-111 T 11-10-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 VSVS12_03499 1650c78e618230c950d133fe811696e5 82 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 1 80 1.1E-27 T 11-10-2018 IPR009778 Modulator of Rho-dependent transcription termination VSVS12_03499 1650c78e618230c950d133fe811696e5 82 Gene3D G3DSA:2.30.30.400 2 77 3.2E-14 T 11-10-2018 IPR038626 Rof-like superfamily VSVS12_03499 1650c78e618230c950d133fe811696e5 82 SUPERFAMILY SSF101744 1 81 2.35E-20 T 11-10-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 VSVS12_01971 4336ac41855ed35b57fd3a647ddb5563 345 Gene3D G3DSA:3.60.60.10 22 343 3.6E-52 T 11-10-2018 VSVS12_01971 4336ac41855ed35b57fd3a647ddb5563 345 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 25 249 1.5E-30 T 11-10-2018 IPR029132 Choloylglycine hydrolase/NAAA C-terminal VSVS12_01971 4336ac41855ed35b57fd3a647ddb5563 345 SUPERFAMILY SSF56235 25 327 4.01E-52 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VSVS12_02452 dc17134c26f845f85fd49bf76e607d69 374 Gene3D G3DSA:3.20.20.70 68 338 8.9E-112 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_02452 dc17134c26f845f85fd49bf76e607d69 374 SUPERFAMILY SSF102114 105 328 1.18E-12 T 11-10-2018 VSVS12_02452 dc17134c26f845f85fd49bf76e607d69 374 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 5 353 71.397 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 VSVS12_02452 dc17134c26f845f85fd49bf76e607d69 374 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 359 1.9E-158 T 11-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 VSVS12_02452 dc17134c26f845f85fd49bf76e607d69 374 Pfam PF04055 Radical SAM superfamily 109 282 8.4E-14 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VSVS12_02452 dc17134c26f845f85fd49bf76e607d69 374 Gene3D G3DSA:1.10.150.530 1 67 3.3E-24 T 11-10-2018 VSVS12_02452 dc17134c26f845f85fd49bf76e607d69 374 PIRSF PIRSF006004 3 366 9.2E-143 T 11-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 VSVS12_03932 efa7811db718b4f2737de6a4b8897d38 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 162 189 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_03932 efa7811db718b4f2737de6a4b8897d38 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 147 201 6.5E-22 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_03932 efa7811db718b4f2737de6a4b8897d38 210 SMART SM00448 4 117 8.9E-30 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_03932 efa7811db718b4f2737de6a4b8897d38 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 148 162 3.9E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_03932 efa7811db718b4f2737de6a4b8897d38 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 162 178 3.9E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_03932 efa7811db718b4f2737de6a4b8897d38 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 178 190 3.9E-14 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_03932 efa7811db718b4f2737de6a4b8897d38 210 SMART SM00421 145 202 1.2E-22 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_03932 efa7811db718b4f2737de6a4b8897d38 210 Pfam PF00072 Response regulator receiver domain 6 117 6.8E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_03932 efa7811db718b4f2737de6a4b8897d38 210 Gene3D G3DSA:3.40.50.12740 4 205 8.7E-64 T 11-10-2018 VSVS12_03932 efa7811db718b4f2737de6a4b8897d38 210 SUPERFAMILY SSF46894 130 204 8.16E-21 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VSVS12_03932 efa7811db718b4f2737de6a4b8897d38 210 SUPERFAMILY SSF52172 4 135 2.85E-33 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_02446 213e020f43bb34d06aef2b34c55b928b 497 SMART SM00382 207 344 0.32 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_02446 213e020f43bb34d06aef2b34c55b928b 497 SMART SM00382 1 173 0.95 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_02446 213e020f43bb34d06aef2b34c55b928b 497 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 157 2.1E-21 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VSVS12_02446 213e020f43bb34d06aef2b34c55b928b 497 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 207 373 7.7E-27 T 11-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 VSVS12_02446 213e020f43bb34d06aef2b34c55b928b 497 Gene3D G3DSA:3.30.300.20 384 466 2.2E-20 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta VSVS12_02446 213e020f43bb34d06aef2b34c55b928b 497 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 464 3.5E-180 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 VSVS12_02446 213e020f43bb34d06aef2b34c55b928b 497 PIRSF PIRSF006485 1 472 5.7E-181 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 VSVS12_02446 213e020f43bb34d06aef2b34c55b928b 497 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 5.2E-10 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 VSVS12_02446 213e020f43bb34d06aef2b34c55b928b 497 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 5.2E-10 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 VSVS12_02446 213e020f43bb34d06aef2b34c55b928b 497 SUPERFAMILY SSF52540 181 470 6.46E-63 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02446 213e020f43bb34d06aef2b34c55b928b 497 Pfam PF01926 50S ribosome-binding GTPase 5 119 1.5E-27 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 VSVS12_02446 213e020f43bb34d06aef2b34c55b928b 497 Pfam PF01926 50S ribosome-binding GTPase 211 328 7.4E-25 T 11-10-2018 IPR006073 GTP binding domain GO:0005525 VSVS12_02446 213e020f43bb34d06aef2b34c55b928b 497 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 384 463 1.1E-25 T 11-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like VSVS12_02446 213e020f43bb34d06aef2b34c55b928b 497 Gene3D G3DSA:3.40.50.300 202 381 1.9E-50 T 11-10-2018 VSVS12_02446 213e020f43bb34d06aef2b34c55b928b 497 Hamap MF_00195 GTPase Der [der]. 2 467 39.312 T 11-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 VSVS12_02446 213e020f43bb34d06aef2b34c55b928b 497 SUPERFAMILY SSF52540 4 168 2.41E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02446 213e020f43bb34d06aef2b34c55b928b 497 Gene3D G3DSA:3.40.50.300 2 159 1.8E-42 T 11-10-2018 VSVS12_01962 cf04a19e4c8dd4a779889e2acfedfa65 228 SUPERFAMILY SSF81901 49 185 5.76E-21 T 11-10-2018 VSVS12_01962 cf04a19e4c8dd4a779889e2acfedfa65 228 SMART SM00671 146 177 29.0 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_01962 cf04a19e4c8dd4a779889e2acfedfa65 228 SMART SM00671 110 145 1.7E-4 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_01962 cf04a19e4c8dd4a779889e2acfedfa65 228 Gene3D G3DSA:1.25.40.10 32 218 4.3E-26 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_03780 1e935ffbdd0b2ccf3914d41485318aaf 311 SUPERFAMILY SSF50891 184 297 3.22E-9 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily VSVS12_03780 1e935ffbdd0b2ccf3914d41485318aaf 311 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 8 299 2.5E-82 T 11-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B VSVS12_03780 1e935ffbdd0b2ccf3914d41485318aaf 311 SMART SM00797 27 308 1.7E-116 T 11-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B VSVS12_03780 1e935ffbdd0b2ccf3914d41485318aaf 311 Gene3D G3DSA:2.40.100.10 182 310 1.3E-40 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily VSVS12_03780 1e935ffbdd0b2ccf3914d41485318aaf 311 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 28 291 5.4E-81 T 11-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B VSVS12_02042 821bee316346a93927dc71818212e01e 191 SUPERFAMILY SSF48150 5 189 4.24E-71 T 11-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 VSVS12_02042 821bee316346a93927dc71818212e01e 191 Gene3D G3DSA:1.10.340.30 3 190 3.9E-75 T 11-10-2018 VSVS12_02042 821bee316346a93927dc71818212e01e 191 Pfam PF03352 Methyladenine glycosylase 8 187 1.4E-71 T 11-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 VSVS12_02888 0f0149cf8819046fca39aeb07ca536e9 161 TIGRFAM TIGR00754 bfr: bacterioferritin 1 157 6.8E-82 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VSVS12_02888 0f0149cf8819046fca39aeb07ca536e9 161 Pfam PF00210 Ferritin-like domain 8 143 1.8E-39 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 VSVS12_02888 0f0149cf8819046fca39aeb07ca536e9 161 PIRSF PIRSF002560 1 157 4.8E-72 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VSVS12_02888 0f0149cf8819046fca39aeb07ca536e9 161 Gene3D G3DSA:1.20.1260.10 1 158 3.6E-71 T 11-10-2018 IPR012347 Ferritin-like VSVS12_02888 0f0149cf8819046fca39aeb07ca536e9 161 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VSVS12_02888 0f0149cf8819046fca39aeb07ca536e9 161 PRINTS PR00601 Bacterioferritin signature 3 22 7.0E-71 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VSVS12_02888 0f0149cf8819046fca39aeb07ca536e9 161 PRINTS PR00601 Bacterioferritin signature 86 106 7.0E-71 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VSVS12_02888 0f0149cf8819046fca39aeb07ca536e9 161 PRINTS PR00601 Bacterioferritin signature 65 85 7.0E-71 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VSVS12_02888 0f0149cf8819046fca39aeb07ca536e9 161 PRINTS PR00601 Bacterioferritin signature 44 64 7.0E-71 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VSVS12_02888 0f0149cf8819046fca39aeb07ca536e9 161 PRINTS PR00601 Bacterioferritin signature 107 127 7.0E-71 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VSVS12_02888 0f0149cf8819046fca39aeb07ca536e9 161 PRINTS PR00601 Bacterioferritin signature 23 43 7.0E-71 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VSVS12_02888 0f0149cf8819046fca39aeb07ca536e9 161 PRINTS PR00601 Bacterioferritin signature 128 149 7.0E-71 T 11-10-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 VSVS12_02888 0f0149cf8819046fca39aeb07ca536e9 161 SUPERFAMILY SSF47240 1 153 4.27E-55 T 11-10-2018 IPR009078 Ferritin-like superfamily VSVS12_03337 0c630e1db1644ac0a3d1c2a429b46173 397 PIRSF PIRSF001480 2 397 1.9E-100 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VSVS12_03337 0c630e1db1644ac0a3d1c2a429b46173 397 Gene3D G3DSA:1.10.441.10 151 308 1.6E-133 T 11-10-2018 VSVS12_03337 0c630e1db1644ac0a3d1c2a429b46173 397 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 263 288 - T 11-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VSVS12_03337 0c630e1db1644ac0a3d1c2a429b46173 397 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 127 135 - T 11-10-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VSVS12_03337 0c630e1db1644ac0a3d1c2a429b46173 397 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 4 381 9.8E-95 T 11-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VSVS12_03337 0c630e1db1644ac0a3d1c2a429b46173 397 Gene3D G3DSA:2.60.120.10 10 283 1.6E-133 T 11-10-2018 IPR014710 RmlC-like jelly roll fold VSVS12_03337 0c630e1db1644ac0a3d1c2a429b46173 397 SUPERFAMILY SSF51182 4 384 3.63E-104 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily VSVS12_03337 0c630e1db1644ac0a3d1c2a429b46173 397 PRINTS PR00714 Phosphomannose isomerase type I signature 36 51 3.2E-65 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VSVS12_03337 0c630e1db1644ac0a3d1c2a429b46173 397 PRINTS PR00714 Phosphomannose isomerase type I signature 228 243 3.2E-65 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VSVS12_03337 0c630e1db1644ac0a3d1c2a429b46173 397 PRINTS PR00714 Phosphomannose isomerase type I signature 82 103 3.2E-65 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VSVS12_03337 0c630e1db1644ac0a3d1c2a429b46173 397 PRINTS PR00714 Phosphomannose isomerase type I signature 263 282 3.2E-65 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VSVS12_03337 0c630e1db1644ac0a3d1c2a429b46173 397 PRINTS PR00714 Phosphomannose isomerase type I signature 127 150 3.2E-65 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VSVS12_03337 0c630e1db1644ac0a3d1c2a429b46173 397 PRINTS PR00714 Phosphomannose isomerase type I signature 8 26 3.2E-65 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VSVS12_03337 0c630e1db1644ac0a3d1c2a429b46173 397 PRINTS PR00714 Phosphomannose isomerase type I signature 244 263 3.2E-65 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VSVS12_03337 0c630e1db1644ac0a3d1c2a429b46173 397 PRINTS PR00714 Phosphomannose isomerase type I signature 282 301 3.2E-65 T 11-10-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VSVS12_03337 0c630e1db1644ac0a3d1c2a429b46173 397 Gene3D G3DSA:2.60.120.10 309 389 1.6E-133 T 11-10-2018 IPR014710 RmlC-like jelly roll fold VSVS12_03337 0c630e1db1644ac0a3d1c2a429b46173 397 Pfam PF01238 Phosphomannose isomerase type I 5 364 1.7E-86 T 11-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 VSVS12_01061 3a518be4c3ef1aedf1b958fbf06c833e 448 Pfam PF00158 Sigma-54 interaction domain 132 297 4.4E-68 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VSVS12_01061 3a518be4c3ef1aedf1b958fbf06c833e 448 SUPERFAMILY SSF52540 131 374 2.87E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01061 3a518be4c3ef1aedf1b958fbf06c833e 448 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 344 353 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VSVS12_01061 3a518be4c3ef1aedf1b958fbf06c833e 448 Pfam PF02954 Bacterial regulatory protein, Fis family 402 440 7.1E-12 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VSVS12_01061 3a518be4c3ef1aedf1b958fbf06c833e 448 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 217 232 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VSVS12_01061 3a518be4c3ef1aedf1b958fbf06c833e 448 Gene3D G3DSA:3.40.50.300 130 302 2.7E-63 T 11-10-2018 VSVS12_01061 3a518be4c3ef1aedf1b958fbf06c833e 448 SMART SM00382 151 294 1.6E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_01061 3a518be4c3ef1aedf1b958fbf06c833e 448 Pfam PF00072 Response regulator receiver domain 2 108 8.7E-27 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_01061 3a518be4c3ef1aedf1b958fbf06c833e 448 SUPERFAMILY SSF52172 2 175 2.42E-41 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_01061 3a518be4c3ef1aedf1b958fbf06c833e 448 Gene3D G3DSA:1.10.10.60 397 440 2.1E-9 T 11-10-2018 VSVS12_01061 3a518be4c3ef1aedf1b958fbf06c833e 448 SMART SM00448 1 108 5.2E-29 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_01061 3a518be4c3ef1aedf1b958fbf06c833e 448 Gene3D G3DSA:1.10.8.60 303 381 5.6E-23 T 11-10-2018 VSVS12_01061 3a518be4c3ef1aedf1b958fbf06c833e 448 SUPERFAMILY SSF46689 397 442 5.68E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_01061 3a518be4c3ef1aedf1b958fbf06c833e 448 Gene3D G3DSA:3.40.50.2300 1 129 3.2E-33 T 11-10-2018 VSVS12_01034 010237a6775a0334a2de6c999a244917 197 SUPERFAMILY SSF56349 10 194 1.88E-36 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VSVS12_01034 010237a6775a0334a2de6c999a244917 197 Pfam PF00589 Phage integrase family 30 182 2.2E-18 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VSVS12_01034 010237a6775a0334a2de6c999a244917 197 Gene3D G3DSA:1.10.443.10 10 183 1.1E-24 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VSVS12_00504 f7d77ae5fec2f49f6c820ca23e612070 683 Pfam PF00149 Calcineurin-like phosphoesterase 60 295 1.9E-11 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VSVS12_00504 f7d77ae5fec2f49f6c820ca23e612070 683 ProSitePatterns PS00786 5'-nucleotidase signature 2. 145 156 - T 11-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VSVS12_00504 f7d77ae5fec2f49f6c820ca23e612070 683 SUPERFAMILY SSF55816 391 633 1.44E-36 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VSVS12_00504 f7d77ae5fec2f49f6c820ca23e612070 683 Gene3D G3DSA:3.90.780.10 439 622 2.4E-49 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VSVS12_00504 f7d77ae5fec2f49f6c820ca23e612070 683 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 59 683 0.0 T 11-10-2018 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 VSVS12_00504 f7d77ae5fec2f49f6c820ca23e612070 683 PRINTS PR01607 Apyrase family signature 58 76 6.7E-29 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VSVS12_00504 f7d77ae5fec2f49f6c820ca23e612070 683 PRINTS PR01607 Apyrase family signature 566 585 6.7E-29 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VSVS12_00504 f7d77ae5fec2f49f6c820ca23e612070 683 PRINTS PR01607 Apyrase family signature 319 339 6.7E-29 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VSVS12_00504 f7d77ae5fec2f49f6c820ca23e612070 683 PRINTS PR01607 Apyrase family signature 464 487 6.7E-29 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VSVS12_00504 f7d77ae5fec2f49f6c820ca23e612070 683 PRINTS PR01607 Apyrase family signature 251 268 6.7E-29 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VSVS12_00504 f7d77ae5fec2f49f6c820ca23e612070 683 PRINTS PR01607 Apyrase family signature 279 302 6.7E-29 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VSVS12_00504 f7d77ae5fec2f49f6c820ca23e612070 683 Pfam PF02872 5'-nucleotidase, C-terminal domain 392 584 1.1E-18 T 11-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VSVS12_00504 f7d77ae5fec2f49f6c820ca23e612070 683 Gene3D G3DSA:3.60.21.10 52 390 1.0E-135 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like VSVS12_00504 f7d77ae5fec2f49f6c820ca23e612070 683 SUPERFAMILY SSF56300 53 390 3.59E-89 T 11-10-2018 VSVS12_01649 768195ee13aa6528a01fa407f5a2798b 101 SUPERFAMILY SSF52540 4 99 5.17E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01649 768195ee13aa6528a01fa407f5a2798b 101 Pfam PF00005 ABC transporter 24 99 6.1E-20 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_01649 768195ee13aa6528a01fa407f5a2798b 101 Gene3D G3DSA:3.40.50.300 6 101 5.6E-28 T 11-10-2018 VSVS12_02146 b189e6f67292e0379312037e7d692aa8 100 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 20 97 1.8E-27 T 11-10-2018 IPR011846 Cyd operon protein YbgE VSVS12_02146 b189e6f67292e0379312037e7d692aa8 100 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 8 98 5.2E-36 T 11-10-2018 IPR011846 Cyd operon protein YbgE VSVS12_01318 c79bcfe2a8b3c9add9acd02361b0ace2 347 Gene3D G3DSA:3.40.800.20 1 344 8.3E-121 T 11-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VSVS12_01318 c79bcfe2a8b3c9add9acd02361b0ace2 347 SUPERFAMILY SSF52768 2 344 3.41E-87 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily VSVS12_01318 c79bcfe2a8b3c9add9acd02361b0ace2 347 PRINTS PR01270 Histone deacetylase superfamily signature 277 287 6.0E-13 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VSVS12_01318 c79bcfe2a8b3c9add9acd02361b0ace2 347 PRINTS PR01270 Histone deacetylase superfamily signature 157 180 6.0E-13 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VSVS12_01318 c79bcfe2a8b3c9add9acd02361b0ace2 347 PRINTS PR01270 Histone deacetylase superfamily signature 190 205 6.0E-13 T 11-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VSVS12_01318 c79bcfe2a8b3c9add9acd02361b0ace2 347 Pfam PF00850 Histone deacetylase domain 28 339 1.2E-67 T 11-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 VSVS12_03155 fdf78c1682ffbd3db8b35623b725fc7c 387 Gene3D G3DSA:1.20.1740.10 1 386 1.8E-9 T 11-10-2018 VSVS12_03155 fdf78c1682ffbd3db8b35623b725fc7c 387 PRINTS PR00166 Aromatic amino acid permease signature 304 322 5.6E-25 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VSVS12_03155 fdf78c1682ffbd3db8b35623b725fc7c 387 PRINTS PR00166 Aromatic amino acid permease signature 325 344 5.6E-25 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VSVS12_03155 fdf78c1682ffbd3db8b35623b725fc7c 387 PRINTS PR00166 Aromatic amino acid permease signature 35 54 5.6E-25 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VSVS12_03155 fdf78c1682ffbd3db8b35623b725fc7c 387 PRINTS PR00166 Aromatic amino acid permease signature 145 165 5.6E-25 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VSVS12_03155 fdf78c1682ffbd3db8b35623b725fc7c 387 PRINTS PR00166 Aromatic amino acid permease signature 80 100 5.6E-25 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VSVS12_03155 fdf78c1682ffbd3db8b35623b725fc7c 387 PRINTS PR00166 Aromatic amino acid permease signature 180 202 5.6E-25 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VSVS12_03155 fdf78c1682ffbd3db8b35623b725fc7c 387 PRINTS PR00166 Aromatic amino acid permease signature 8 31 5.6E-25 T 11-10-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 VSVS12_03155 fdf78c1682ffbd3db8b35623b725fc7c 387 Pfam PF03222 Tryptophan/tyrosine permease family 2 382 5.3E-68 T 11-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 VSVS12_00483 ce53204e1450318bfcf8756306ce92cc 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 1.7E-40 T 11-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00483 ce53204e1450318bfcf8756306ce92cc 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 11-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00483 ce53204e1450318bfcf8756306ce92cc 179 Gene3D G3DSA:3.30.1440.10 1 179 1.4E-80 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00483 ce53204e1450318bfcf8756306ce92cc 179 Pfam PF00281 Ribosomal protein L5 24 80 3.5E-29 T 11-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00483 ce53204e1450318bfcf8756306ce92cc 179 SUPERFAMILY SSF55282 4 179 2.59E-78 T 11-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00483 ce53204e1450318bfcf8756306ce92cc 179 PIRSF PIRSF002161 1 179 6.5E-66 T 11-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00483 ce53204e1450318bfcf8756306ce92cc 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.917 T 11-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_01701 3ef9d845009c417a8b19c7f418977b5b 244 SUPERFAMILY SSF52467 6 234 4.58E-72 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VSVS12_01701 3ef9d845009c417a8b19c7f418977b5b 244 Gene3D G3DSA:3.40.50.1220 8 227 2.5E-80 T 11-10-2018 VSVS12_01701 3ef9d845009c417a8b19c7f418977b5b 244 Gene3D G3DSA:3.30.1600.10 22 158 2.5E-80 T 11-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily VSVS12_01701 3ef9d845009c417a8b19c7f418977b5b 244 Pfam PF02146 Sir2 family 13 186 4.7E-50 T 11-10-2018 IPR003000 Sirtuin family GO:0070403 VSVS12_01701 3ef9d845009c417a8b19c7f418977b5b 244 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 6 236 55.067 T 11-10-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 VSVS12_00144 456e1162aa2628d5016f38808e7cadb9 710 Pfam PF00665 Integrase core domain 288 426 2.6E-7 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VSVS12_00144 456e1162aa2628d5016f38808e7cadb9 710 SUPERFAMILY SSF53098 314 436 4.74E-6 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_00144 456e1162aa2628d5016f38808e7cadb9 710 Gene3D G3DSA:3.30.420.10 282 477 3.6E-15 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VSVS12_00144 456e1162aa2628d5016f38808e7cadb9 710 Pfam PF09299 Mu transposase, C-terminal 520 585 2.9E-4 T 11-10-2018 IPR015378 Transposase-like, Mu, C-terminal VSVS12_00500 be001e18838c587867ffdb000a16a322 186 Gene3D G3DSA:3.10.450.350 88 184 9.7E-14 T 11-10-2018 VSVS12_00500 be001e18838c587867ffdb000a16a322 186 Pfam PF04225 Opacity-associated protein A LysM-like domain 102 186 1.7E-38 T 11-10-2018 IPR007340 Opacity-associated protein A VSVS12_00500 be001e18838c587867ffdb000a16a322 186 Pfam PF08525 Opacity-associated protein A N-terminal motif 37 62 9.2E-8 T 11-10-2018 IPR013731 Opacity-associated protein A, N-terminal VSVS12_02273 95f7f55573e1c2da2feba834a82b57ef 421 TIGRFAM TIGR01499 folC: bifunctional protein FolC 32 416 1.5E-106 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 VSVS12_02273 95f7f55573e1c2da2feba834a82b57ef 421 Pfam PF02875 Mur ligase family, glutamate ligase domain 288 339 1.2E-7 T 11-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 VSVS12_02273 95f7f55573e1c2da2feba834a82b57ef 421 Pfam PF08245 Mur ligase middle domain 54 196 1.0E-7 T 11-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 VSVS12_02273 95f7f55573e1c2da2feba834a82b57ef 421 SUPERFAMILY SSF53623 15 285 1.24E-85 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VSVS12_02273 95f7f55573e1c2da2feba834a82b57ef 421 Gene3D G3DSA:3.40.1190.10 1 288 1.1E-92 T 11-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 VSVS12_02273 95f7f55573e1c2da2feba834a82b57ef 421 PIRSF PIRSF001563 6 421 2.7E-108 T 11-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 VSVS12_02273 95f7f55573e1c2da2feba834a82b57ef 421 Gene3D G3DSA:3.90.190.20 289 420 2.4E-35 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VSVS12_02273 95f7f55573e1c2da2feba834a82b57ef 421 SUPERFAMILY SSF53244 287 417 2.38E-31 T 11-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 VSVS12_02273 95f7f55573e1c2da2feba834a82b57ef 421 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 11-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 VSVS12_01448 e41ce11a57d8948efc1d1e6aa178cdb7 260 SUPERFAMILY SSF55658 4 48 8.37E-15 T 11-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal VSVS12_01448 e41ce11a57d8948efc1d1e6aa178cdb7 260 SUPERFAMILY SSF53098 92 236 1.39E-37 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_01448 e41ce11a57d8948efc1d1e6aa178cdb7 260 Pfam PF00075 RNase H 92 231 4.1E-28 T 11-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 VSVS12_01448 e41ce11a57d8948efc1d1e6aa178cdb7 260 PIRSF PIRSF036852 1 86 5.2E-17 T 11-10-2018 IPR017067 Ribonuclease H1, eukaryote GO:0000287|GO:0004523 VSVS12_01448 e41ce11a57d8948efc1d1e6aa178cdb7 260 PIRSF PIRSF036852 51 240 4.5E-29 T 11-10-2018 IPR017067 Ribonuclease H1, eukaryote GO:0000287|GO:0004523 VSVS12_01448 e41ce11a57d8948efc1d1e6aa178cdb7 260 Gene3D G3DSA:3.30.420.10 82 255 5.0E-40 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VSVS12_01448 e41ce11a57d8948efc1d1e6aa178cdb7 260 Pfam PF01693 Caulimovirus viroplasmin 4 46 5.6E-21 T 11-10-2018 IPR011320 Ribonuclease H1, N-terminal VSVS12_01448 e41ce11a57d8948efc1d1e6aa178cdb7 260 Gene3D G3DSA:3.40.970.10 2 53 1.7E-19 T 11-10-2018 IPR037056 Ribonuclease H1, N-terminal domain superfamily VSVS12_01855 817790c02e4646a9eb76d730e68461ec 295 Gene3D G3DSA:1.10.10.60 188 240 2.4E-9 T 11-10-2018 VSVS12_01855 817790c02e4646a9eb76d730e68461ec 295 Gene3D G3DSA:1.10.10.60 241 295 1.4E-17 T 11-10-2018 VSVS12_01855 817790c02e4646a9eb76d730e68461ec 295 SUPERFAMILY SSF46689 191 242 5.38E-5 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_01855 817790c02e4646a9eb76d730e68461ec 295 Pfam PF12833 Helix-turn-helix domain 214 292 4.9E-21 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VSVS12_01855 817790c02e4646a9eb76d730e68461ec 295 SMART SM00342 208 291 1.0E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VSVS12_01855 817790c02e4646a9eb76d730e68461ec 295 SUPERFAMILY SSF46689 245 294 1.55E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_01855 817790c02e4646a9eb76d730e68461ec 295 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 245 287 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VSVS12_03700 dbe8b4e2775c97b237ace184a877e942 410 Gene3D G3DSA:1.20.1250.20 3 401 1.6E-58 T 11-10-2018 VSVS12_03700 dbe8b4e2775c97b237ace184a877e942 410 SUPERFAMILY SSF103473 10 398 2.49E-57 T 11-10-2018 IPR036259 MFS transporter superfamily VSVS12_03700 dbe8b4e2775c97b237ace184a877e942 410 Pfam PF07690 Major Facilitator Superfamily 15 302 6.0E-31 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VSVS12_03349 6ec59de38df7f4a5575dc38bfe17d562 412 Gene3D G3DSA:3.40.50.300 33 314 8.6E-78 T 11-10-2018 VSVS12_03349 6ec59de38df7f4a5575dc38bfe17d562 412 Pfam PF00005 ABC transporter 45 193 2.7E-34 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_03349 6ec59de38df7f4a5575dc38bfe17d562 412 SUPERFAMILY SSF54631 275 396 4.3E-12 T 11-10-2018 VSVS12_03349 6ec59de38df7f4a5575dc38bfe17d562 412 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_03349 6ec59de38df7f4a5575dc38bfe17d562 412 SMART SM00382 54 242 9.3E-18 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_03349 6ec59de38df7f4a5575dc38bfe17d562 412 Pfam PF00571 CBS domain 339 387 9.8E-4 T 11-10-2018 IPR000644 CBS domain VSVS12_03349 6ec59de38df7f4a5575dc38bfe17d562 412 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 37 391 1.3E-124 T 11-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 VSVS12_03349 6ec59de38df7f4a5575dc38bfe17d562 412 SUPERFAMILY SSF52540 38 265 5.32E-75 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03349 6ec59de38df7f4a5575dc38bfe17d562 412 Gene3D G3DSA:3.10.580.10 315 400 3.8E-6 T 11-10-2018 VSVS12_00026 f5695b8f4989f883755360f56344091c 169 SUPERFAMILY SSF52799 12 166 2.72E-31 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like VSVS12_00026 f5695b8f4989f883755360f56344091c 169 Pfam PF00782 Dual specificity phosphatase, catalytic domain 67 152 6.4E-8 T 11-10-2018 IPR000340 Dual specificity phosphatase, catalytic domain GO:0008138|GO:0016311 VSVS12_00026 f5695b8f4989f883755360f56344091c 169 ProSitePatterns PS00383 Tyrosine specific protein phosphatases active site. 114 124 - T 11-10-2018 IPR016130 Protein-tyrosine phosphatase, active site GO:0004725|GO:0016311 VSVS12_00026 f5695b8f4989f883755360f56344091c 169 Gene3D G3DSA:3.90.190.10 9 168 4.9E-29 T 11-10-2018 IPR029021 Protein-tyrosine phosphatase-like VSVS12_01050 9add9e2beec8c025cbbe870193f57977 138 ProSitePatterns PS00934 Glyoxalase I signature 1. 8 29 - T 11-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 VSVS12_01050 9add9e2beec8c025cbbe870193f57977 138 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 126 7.3E-25 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VSVS12_01050 9add9e2beec8c025cbbe870193f57977 138 ProSitePatterns PS00935 Glyoxalase I signature 2. 72 84 - T 11-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 VSVS12_01050 9add9e2beec8c025cbbe870193f57977 138 SUPERFAMILY SSF54593 3 130 2.55E-36 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VSVS12_01050 9add9e2beec8c025cbbe870193f57977 138 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 5 136 8.0E-69 T 11-10-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 VSVS12_01050 9add9e2beec8c025cbbe870193f57977 138 Gene3D G3DSA:3.10.180.10 3 135 4.5E-51 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VSVS12_03509 6ae5b2de1f06ffdc924e5fd57f967fc8 334 Pfam PF14486 Domain of unknown function (DUF4432) 33 331 2.8E-10 T 11-10-2018 IPR027839 Protein of unknown function DUF4432 VSVS12_03509 6ae5b2de1f06ffdc924e5fd57f967fc8 334 Gene3D G3DSA:2.70.98.80 8 334 1.2E-13 T 11-10-2018 VSVS12_03509 6ae5b2de1f06ffdc924e5fd57f967fc8 334 SUPERFAMILY SSF74650 36 328 6.59E-6 T 11-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 VSVS12_03400 467ad9ef3af38b301bda2b2880d0c5b6 289 Gene3D G3DSA:2.60.120.10 3 101 5.6E-6 T 11-10-2018 IPR014710 RmlC-like jelly roll fold VSVS12_03400 467ad9ef3af38b301bda2b2880d0c5b6 289 Pfam PF12833 Helix-turn-helix domain 203 280 3.9E-17 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VSVS12_03400 467ad9ef3af38b301bda2b2880d0c5b6 289 SMART SM00342 196 279 1.2E-20 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VSVS12_03400 467ad9ef3af38b301bda2b2880d0c5b6 289 Gene3D G3DSA:1.10.10.60 180 283 2.1E-23 T 11-10-2018 VSVS12_03400 467ad9ef3af38b301bda2b2880d0c5b6 289 SUPERFAMILY SSF51215 37 161 3.92E-11 T 11-10-2018 IPR037923 Transcription regulator HTH-like VSVS12_03400 467ad9ef3af38b301bda2b2880d0c5b6 289 SUPERFAMILY SSF46689 235 281 3.05E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_03400 467ad9ef3af38b301bda2b2880d0c5b6 289 Pfam PF02311 AraC-like ligand binding domain 37 156 4.4E-8 T 11-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VSVS12_01702 e5300d03b7d612fc598ce344bd57b17d 406 Gene3D G3DSA:1.10.3430.10 2 406 2.0E-100 T 11-10-2018 IPR029020 Ammonium/urea transporter VSVS12_01702 e5300d03b7d612fc598ce344bd57b17d 406 SUPERFAMILY SSF111352 17 384 4.32E-95 T 11-10-2018 VSVS12_01702 e5300d03b7d612fc598ce344bd57b17d 406 ProSitePatterns PS01219 Ammonium transporters signature. 167 192 - T 11-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 VSVS12_01702 e5300d03b7d612fc598ce344bd57b17d 406 Pfam PF00909 Ammonium Transporter Family 23 399 1.1E-86 T 11-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 VSVS12_00463 e45fe97b34635a0d75cf25630793b0b8 192 SUPERFAMILY SSF54534 2 139 1.67E-33 T 11-10-2018 VSVS12_00463 e45fe97b34635a0d75cf25630793b0b8 192 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 4 135 4.4E-10 T 11-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain VSVS12_00463 e45fe97b34635a0d75cf25630793b0b8 192 Gene3D G3DSA:3.10.50.40 3 153 7.9E-59 T 11-10-2018 VSVS12_00463 e45fe97b34635a0d75cf25630793b0b8 192 Gene3D G3DSA:2.40.10.330 70 120 7.9E-59 T 11-10-2018 VSVS12_00092 97b52873334210ece707e1e05bebd9c1 189 Gene3D G3DSA:1.10.10.10 99 189 9.9E-6 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_00092 97b52873334210ece707e1e05bebd9c1 189 TIGRFAM TIGR02999 Sig-70_X6: RNA polymerase sigma factor, TIGR02999 family 3 188 3.2E-54 T 11-10-2018 IPR011517 RNA polymerase sigma-70 ECF-like VSVS12_00092 97b52873334210ece707e1e05bebd9c1 189 SUPERFAMILY SSF88659 130 187 8.94E-5 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VSVS12_00092 97b52873334210ece707e1e05bebd9c1 189 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 187 1.6E-17 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VSVS12_00092 97b52873334210ece707e1e05bebd9c1 189 Pfam PF07638 ECF sigma factor 3 188 9.2E-30 T 11-10-2018 IPR011517 RNA polymerase sigma-70 ECF-like VSVS12_00977 c3977380c408c55bc8d5247346b329e4 249 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 173 242 2.6E-21 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VSVS12_00977 c3977380c408c55bc8d5247346b329e4 249 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 6 226 1.3E-54 T 11-10-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 VSVS12_00977 c3977380c408c55bc8d5247346b329e4 249 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 121 4.4E-31 T 11-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G VSVS12_00977 c3977380c408c55bc8d5247346b329e4 249 SUPERFAMILY SSF117143 77 207 1.28E-15 T 11-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like VSVS12_01208 257f71bc193fbb05a160dcba1ca4488f 316 Gene3D G3DSA:1.20.225.30 243 313 3.5E-26 T 11-10-2018 VSVS12_01208 257f71bc193fbb05a160dcba1ca4488f 316 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 11-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 VSVS12_01208 257f71bc193fbb05a160dcba1ca4488f 316 SUPERFAMILY SSF51395 1 313 9.7E-72 T 11-10-2018 VSVS12_01208 257f71bc193fbb05a160dcba1ca4488f 316 Pfam PF01207 Dihydrouridine synthase (Dus) 5 294 4.1E-77 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VSVS12_01208 257f71bc193fbb05a160dcba1ca4488f 316 Gene3D G3DSA:3.20.20.70 1 242 1.7E-78 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_01208 257f71bc193fbb05a160dcba1ca4488f 316 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 310 51.434 T 11-10-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 VSVS12_01208 257f71bc193fbb05a160dcba1ca4488f 316 PIRSF PIRSF006621 1 316 5.4E-76 T 11-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 VSVS12_03799 5718ee2001c5ed5160c3dacafa12d282 375 PRINTS PR00075 Fatty acid desaturase family 1 signature 232 246 6.9E-30 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 VSVS12_03799 5718ee2001c5ed5160c3dacafa12d282 375 PRINTS PR00075 Fatty acid desaturase family 1 signature 61 81 6.9E-30 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 VSVS12_03799 5718ee2001c5ed5160c3dacafa12d282 375 PRINTS PR00075 Fatty acid desaturase family 1 signature 99 128 6.9E-30 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 VSVS12_03799 5718ee2001c5ed5160c3dacafa12d282 375 PRINTS PR00075 Fatty acid desaturase family 1 signature 189 210 6.9E-30 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 VSVS12_03799 5718ee2001c5ed5160c3dacafa12d282 375 PRINTS PR00075 Fatty acid desaturase family 1 signature 11 31 6.9E-30 T 11-10-2018 IPR015876 Acyl-CoA desaturase GO:0016717|GO:0055114 Reactome: R-HSA-75105 VSVS12_03799 5718ee2001c5ed5160c3dacafa12d282 375 Pfam PF00487 Fatty acid desaturase 42 260 3.9E-18 T 11-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 VSVS12_03799 5718ee2001c5ed5160c3dacafa12d282 375 PIRSF PIRSF000345 3 326 2.3E-97 T 11-10-2018 IPR009160 Acyl-CoA desaturase, haem/steroid binding domain-containing GO:0004768|GO:0006636|GO:0016021 MetaCyc: PWY-5987|MetaCyc: PWY-5996 VSVS12_01184 b85df0b42d1225016f058bbfcf209c22 363 Pfam PF07715 TonB-dependent Receptor Plug Domain 42 151 3.6E-24 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain VSVS12_01184 b85df0b42d1225016f058bbfcf209c22 363 Gene3D G3DSA:2.170.130.10 27 156 8.0E-35 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VSVS12_01184 b85df0b42d1225016f058bbfcf209c22 363 SUPERFAMILY SSF56935 18 359 8.99E-55 T 11-10-2018 VSVS12_01184 b85df0b42d1225016f058bbfcf209c22 363 Gene3D G3DSA:2.40.170.20 166 360 4.6E-23 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VSVS12_02757 647b986c5dfcf09eb090753b7aa9cf39 396 Gene3D G3DSA:3.40.1160.10 4 256 7.9E-82 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VSVS12_02757 647b986c5dfcf09eb090753b7aa9cf39 396 SUPERFAMILY SSF53633 6 244 1.06E-69 T 11-10-2018 IPR036393 Acetylglutamate kinase-like superfamily VSVS12_02757 647b986c5dfcf09eb090753b7aa9cf39 396 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 65 377 1.2E-71 T 11-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VSVS12_02757 647b986c5dfcf09eb090753b7aa9cf39 396 ProSitePatterns PS00324 Aspartokinase signature. 7 15 - T 11-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 VSVS12_02757 647b986c5dfcf09eb090753b7aa9cf39 396 Pfam PF00696 Amino acid kinase family 5 231 1.8E-48 T 11-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 VSVS12_02309 8026b3f1a0ab3f7c788510ee0aea07f4 136 Pfam PF02561 Flagellar protein FliS 6 122 5.0E-38 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 VSVS12_02309 8026b3f1a0ab3f7c788510ee0aea07f4 136 SUPERFAMILY SSF101116 6 127 8.24E-40 T 11-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 VSVS12_02309 8026b3f1a0ab3f7c788510ee0aea07f4 136 Gene3D G3DSA:1.20.120.340 2 126 6.4E-40 T 11-10-2018 VSVS12_02309 8026b3f1a0ab3f7c788510ee0aea07f4 136 PIRSF PIRSF039090 1 132 1.4E-43 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 VSVS12_02309 8026b3f1a0ab3f7c788510ee0aea07f4 136 TIGRFAM TIGR00208 fliS: flagellar protein FliS 4 122 3.1E-24 T 11-10-2018 IPR003713 Flagellar protein FliS GO:0044780 VSVS12_01339 5570d35cd26d6db1a066a155b16d6d55 374 SMART SM01003 4 137 3.0E-76 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VSVS12_01339 5570d35cd26d6db1a066a155b16d6d55 374 Gene3D G3DSA:3.40.50.720 130 305 1.1E-134 T 11-10-2018 VSVS12_01339 5570d35cd26d6db1a066a155b16d6d55 374 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 370 1.6E-155 T 11-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 VSVS12_01339 5570d35cd26d6db1a066a155b16d6d55 374 SUPERFAMILY SSF52283 1 360 1.45E-65 T 11-10-2018 VSVS12_01339 5570d35cd26d6db1a066a155b16d6d55 374 PIRSF PIRSF000183 1 371 1.3E-155 T 11-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 VSVS12_01339 5570d35cd26d6db1a066a155b16d6d55 374 SUPERFAMILY SSF51735 137 303 1.5E-48 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_01339 5570d35cd26d6db1a066a155b16d6d55 374 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 352 2.4E-82 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VSVS12_01339 5570d35cd26d6db1a066a155b16d6d55 374 SMART SM01002 149 297 1.9E-86 T 11-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain VSVS12_01339 5570d35cd26d6db1a066a155b16d6d55 374 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 6.3E-45 T 11-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal VSVS12_01339 5570d35cd26d6db1a066a155b16d6d55 374 Gene3D G3DSA:3.40.50.720 3 353 1.1E-134 T 11-10-2018 VSVS12_03970 dae41fb4cbb46d193a44b782c5168412 202 Pfam PF09346 SMI1 / KNR4 family (SUKH-1) 48 196 1.1E-7 T 11-10-2018 IPR018958 Knr4/Smi1-like domain VSVS12_03970 dae41fb4cbb46d193a44b782c5168412 202 SUPERFAMILY SSF160631 38 197 2.62E-10 T 11-10-2018 VSVS12_04580 eaaeaa9164ac407a8dafee03f03ddaef 290 Pfam PF07968 Leukocidin/Hemolysin toxin family 18 160 3.8E-13 T 11-10-2018 IPR016183 Leukocidin/Hemolysin toxin GO:0005576|GO:0051715 VSVS12_04580 eaaeaa9164ac407a8dafee03f03ddaef 290 SUPERFAMILY SSF50370 174 264 2.08E-12 T 11-10-2018 IPR035992 Ricin B-like lectins VSVS12_04580 eaaeaa9164ac407a8dafee03f03ddaef 290 Gene3D G3DSA:2.70.240.20 33 268 1.1E-84 T 11-10-2018 VSVS12_04580 eaaeaa9164ac407a8dafee03f03ddaef 290 Gene3D G3DSA:3.30.70.2270 6 32 1.1E-84 T 11-10-2018 VSVS12_04580 eaaeaa9164ac407a8dafee03f03ddaef 290 SMART SM00458 167 285 0.0037 T 11-10-2018 IPR000772 Ricin B, lectin domain VSVS12_03759 e068e65f5b237315f57b3d7598024617 264 SUPERFAMILY SSF48208 1 250 3.33E-64 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 VSVS12_03759 e068e65f5b237315f57b3d7598024617 264 Gene3D G3DSA:1.50.10.10 1 259 2.3E-77 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 VSVS12_03759 e068e65f5b237315f57b3d7598024617 264 PRINTS PR00735 Glycosyl hydrolase family 8 signature 134 143 6.8E-9 T 11-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 VSVS12_03759 e068e65f5b237315f57b3d7598024617 264 PRINTS PR00735 Glycosyl hydrolase family 8 signature 110 121 6.8E-9 T 11-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 VSVS12_03759 e068e65f5b237315f57b3d7598024617 264 PRINTS PR00735 Glycosyl hydrolase family 8 signature 7 25 6.8E-9 T 11-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 VSVS12_03759 e068e65f5b237315f57b3d7598024617 264 PRINTS PR00735 Glycosyl hydrolase family 8 signature 230 244 6.8E-9 T 11-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 VSVS12_03759 e068e65f5b237315f57b3d7598024617 264 Pfam PF01270 Glycosyl hydrolases family 8 3 243 4.8E-36 T 11-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 VSVS12_00711 a41919a38c5cfc4896f6a2b1b11df9e1 340 Gene3D G3DSA:3.40.50.150 1 159 6.7E-50 T 11-10-2018 VSVS12_00711 a41919a38c5cfc4896f6a2b1b11df9e1 340 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 269 275 - T 11-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 VSVS12_00711 a41919a38c5cfc4896f6a2b1b11df9e1 340 Pfam PF08468 Methyltransferase small domain N-terminal 8 163 1.3E-56 T 11-10-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 VSVS12_00711 a41919a38c5cfc4896f6a2b1b11df9e1 340 Gene3D G3DSA:3.40.50.150 160 340 4.0E-42 T 11-10-2018 VSVS12_00711 a41919a38c5cfc4896f6a2b1b11df9e1 340 Pfam PF05175 Methyltransferase small domain 172 336 2.6E-60 T 11-10-2018 IPR007848 Methyltransferase small domain GO:0008168 VSVS12_00711 a41919a38c5cfc4896f6a2b1b11df9e1 340 SUPERFAMILY SSF53335 157 334 3.55E-25 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_00711 a41919a38c5cfc4896f6a2b1b11df9e1 340 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 340 46.122 T 11-10-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 VSVS12_02591 3021c4b4e413816e0b48858a5d8ce78a 273 Pfam PF00149 Calcineurin-like phosphoesterase 14 205 5.2E-13 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VSVS12_02591 3021c4b4e413816e0b48858a5d8ce78a 273 Gene3D G3DSA:3.60.21.10 1 265 5.1E-70 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like VSVS12_02591 3021c4b4e413816e0b48858a5d8ce78a 273 SUPERFAMILY SSF56300 11 258 1.42E-57 T 11-10-2018 VSVS12_02591 3021c4b4e413816e0b48858a5d8ce78a 273 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 13 259 41.607 T 11-10-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 VSVS12_02591 3021c4b4e413816e0b48858a5d8ce78a 273 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 204 259 1.0E-18 T 11-10-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 VSVS12_03867 7e2f2052ea971d3648e3dedc9d6d2238 370 Pfam PF03459 TOBE domain 293 359 1.3E-14 T 11-10-2018 IPR005116 Transport-associated OB, type 1 VSVS12_03867 7e2f2052ea971d3648e3dedc9d6d2238 370 SMART SM00382 25 208 1.3E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_03867 7e2f2052ea971d3648e3dedc9d6d2238 370 Gene3D G3DSA:3.40.50.300 6 237 1.9E-57 T 11-10-2018 VSVS12_03867 7e2f2052ea971d3648e3dedc9d6d2238 370 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_03867 7e2f2052ea971d3648e3dedc9d6d2238 370 SUPERFAMILY SSF50331 237 359 2.76E-17 T 11-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal VSVS12_03867 7e2f2052ea971d3648e3dedc9d6d2238 370 Pfam PF00005 ABC transporter 18 158 6.0E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_03867 7e2f2052ea971d3648e3dedc9d6d2238 370 Gene3D G3DSA:2.40.50.100 292 360 1.6E-12 T 11-10-2018 VSVS12_03867 7e2f2052ea971d3648e3dedc9d6d2238 370 SUPERFAMILY SSF52540 12 238 2.31E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03867 7e2f2052ea971d3648e3dedc9d6d2238 370 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 5 359 2.7E-137 T 11-10-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 VSVS12_00571 9fca1144ac6adac77d12f398550216b3 198 Hamap MF_01405 dITP/XTP pyrophosphatase. 2 196 50.037 T 11-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 VSVS12_00571 9fca1144ac6adac77d12f398550216b3 198 SUPERFAMILY SSF52972 1 195 2.62E-73 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VSVS12_00571 9fca1144ac6adac77d12f398550216b3 198 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 194 3.3E-64 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 VSVS12_00571 9fca1144ac6adac77d12f398550216b3 198 Gene3D G3DSA:3.90.950.10 1 198 4.3E-81 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VSVS12_00571 9fca1144ac6adac77d12f398550216b3 198 Pfam PF01725 Ham1 family 4 191 4.8E-57 T 11-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 VSVS12_02768 15b7cc817c716c34eb4cfa742f373c7b 64 Pfam PF03884 DNA gyrase inhibitor YacG 7 57 3.0E-23 T 11-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 VSVS12_02768 15b7cc817c716c34eb4cfa742f373c7b 64 Gene3D G3DSA:3.30.50.10 1 64 5.3E-24 T 11-10-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 Reactome: R-HSA-383280 VSVS12_02768 15b7cc817c716c34eb4cfa742f373c7b 64 SUPERFAMILY SSF57716 2 62 1.13E-20 T 11-10-2018 VSVS12_02768 15b7cc817c716c34eb4cfa742f373c7b 64 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 3 59 18.198 T 11-10-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 VSVS12_03568 16dbb1244f145d71917e9d23c1b69838 619 SUPERFAMILY SSF53448 109 459 3.38E-34 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VSVS12_03568 16dbb1244f145d71917e9d23c1b69838 619 Gene3D G3DSA:3.90.550.10 98 318 9.7E-45 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VSVS12_03568 16dbb1244f145d71917e9d23c1b69838 619 Pfam PF00535 Glycosyl transferase family 2 110 303 1.2E-18 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VSVS12_02666 277b35a326d68f09519b4402eee004ff 197 SUPERFAMILY SSF100950 3 195 4.74E-58 T 11-10-2018 IPR037171 NagB/RpiA transferase-like VSVS12_02666 277b35a326d68f09519b4402eee004ff 197 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 4 187 7.4E-52 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase VSVS12_02666 277b35a326d68f09519b4402eee004ff 197 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 4 187 1.5E-45 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase VSVS12_02666 277b35a326d68f09519b4402eee004ff 197 Gene3D G3DSA:3.40.50.10420 2 195 1.6E-56 T 11-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily VSVS12_02666 277b35a326d68f09519b4402eee004ff 197 PIRSF PIRSF006806 1 190 3.1E-37 T 11-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase VSVS12_04576 ff772fa248ac88b1850828e649f34821 155 Gene3D G3DSA:3.40.930.10 1 155 2.2E-44 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VSVS12_04576 ff772fa248ac88b1850828e649f34821 155 SUPERFAMILY SSF55804 5 152 7.85E-31 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VSVS12_04576 ff772fa248ac88b1850828e649f34821 155 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 152 3.4E-31 T 11-10-2018 IPR002178 PTS EIIA type-2 domain VSVS12_04548 ff772fa248ac88b1850828e649f34821 155 Gene3D G3DSA:3.40.930.10 1 155 2.2E-44 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VSVS12_04548 ff772fa248ac88b1850828e649f34821 155 SUPERFAMILY SSF55804 5 152 7.85E-31 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VSVS12_04548 ff772fa248ac88b1850828e649f34821 155 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 152 3.4E-31 T 11-10-2018 IPR002178 PTS EIIA type-2 domain VSVS12_00856 9c3e576c435112ace08bc24c8b3a5ba1 156 Gene3D G3DSA:3.40.50.960 1 156 4.2E-64 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VSVS12_00856 9c3e576c435112ace08bc24c8b3a5ba1 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 9.7E-55 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VSVS12_00856 9c3e576c435112ace08bc24c8b3a5ba1 156 SUPERFAMILY SSF52121 4 154 8.5E-61 T 11-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VSVS12_00856 9c3e576c435112ace08bc24c8b3a5ba1 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.264 T 11-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VSVS12_00856 9c3e576c435112ace08bc24c8b3a5ba1 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 2.9E-57 T 11-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VSVS12_00261 cb5b60d0d2f9000ab56a09b2964643fe 185 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 4 185 2.8E-38 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 VSVS12_00261 cb5b60d0d2f9000ab56a09b2964643fe 185 Pfam PF01300 Telomere recombination 10 185 1.1E-48 T 11-10-2018 IPR006070 YrdC-like domain GO:0003725 VSVS12_00261 cb5b60d0d2f9000ab56a09b2964643fe 185 Gene3D G3DSA:3.90.870.10 1 183 6.9E-61 T 11-10-2018 VSVS12_00261 cb5b60d0d2f9000ab56a09b2964643fe 185 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 1 183 40.538 T 11-10-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 VSVS12_00261 cb5b60d0d2f9000ab56a09b2964643fe 185 SUPERFAMILY SSF55821 2 178 7.32E-56 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VSVS12_01928 b1e669d64c837a8b9b484b0378097ac3 578 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 6 538 7.1E-133 T 11-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 VSVS12_01928 b1e669d64c837a8b9b484b0378097ac3 578 SUPERFAMILY SSF90123 7 327 2.75E-38 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VSVS12_01928 b1e669d64c837a8b9b484b0378097ac3 578 ProSitePatterns PS00211 ABC transporters family signature. 480 494 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_01928 b1e669d64c837a8b9b484b0378097ac3 578 Gene3D G3DSA:3.40.50.300 336 577 2.3E-73 T 11-10-2018 VSVS12_01928 b1e669d64c837a8b9b484b0378097ac3 578 Gene3D G3DSA:1.20.1560.10 1 321 1.7E-25 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VSVS12_01928 b1e669d64c837a8b9b484b0378097ac3 578 SUPERFAMILY SSF52540 336 576 2.02E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01928 b1e669d64c837a8b9b484b0378097ac3 578 Pfam PF00005 ABC transporter 357 507 9.3E-30 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_01928 b1e669d64c837a8b9b484b0378097ac3 578 SMART SM00382 365 570 4.7E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_00397 e91d1405f26a7cbe7a786a931df7f3db 387 Gene3D G3DSA:1.10.150.130 84 176 1.7E-8 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal VSVS12_00397 e91d1405f26a7cbe7a786a931df7f3db 387 Pfam PF00589 Phage integrase family 198 363 3.6E-13 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VSVS12_00397 e91d1405f26a7cbe7a786a931df7f3db 387 Gene3D G3DSA:1.10.443.10 184 381 4.4E-30 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VSVS12_00397 e91d1405f26a7cbe7a786a931df7f3db 387 SUPERFAMILY SSF56349 85 366 6.77E-45 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VSVS12_00397 e91d1405f26a7cbe7a786a931df7f3db 387 Pfam PF12167 Arm DNA-binding domain 1 65 1.3E-20 T 11-10-2018 IPR022000 Min27-like integrase, DNA-binding domain VSVS12_04273 56a9481be200de952c3073fcf61c0817 290 SUPERFAMILY SSF53850 89 290 1.99E-28 T 11-10-2018 VSVS12_04273 56a9481be200de952c3073fcf61c0817 290 SUPERFAMILY SSF46785 7 88 5.2E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_04273 56a9481be200de952c3073fcf61c0817 290 Gene3D G3DSA:3.40.190.290 91 288 8.1E-40 T 11-10-2018 VSVS12_04273 56a9481be200de952c3073fcf61c0817 290 Gene3D G3DSA:1.10.10.10 3 89 3.9E-23 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_04273 56a9481be200de952c3073fcf61c0817 290 Pfam PF03466 LysR substrate binding domain 88 289 4.2E-26 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_04273 56a9481be200de952c3073fcf61c0817 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 62 1.1E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_02738 ce0ac17f634e3b1868c1440700835e6e 158 Pfam PF06271 RDD family 10 148 8.5E-23 T 11-10-2018 IPR010432 RDD VSVS12_04000 867b12e96c6aeffa1f2df5928be94146 245 Pfam PF01925 Sulfite exporter TauE/SafE 1 243 8.4E-46 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VSVS12_03165 3b93983ea9c6e044aa2f86cde977389e 280 SUPERFAMILY SSF56784 2 264 1.3E-58 T 11-10-2018 IPR036412 HAD-like superfamily VSVS12_03165 3b93983ea9c6e044aa2f86cde977389e 280 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 6 263 3.0E-49 T 11-10-2018 IPR000150 Cof family GO:0016787 VSVS12_03165 3b93983ea9c6e044aa2f86cde977389e 280 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 236 1.2E-23 T 11-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 VSVS12_03165 3b93983ea9c6e044aa2f86cde977389e 280 ProSitePatterns PS01229 Hypothetical cof family signature 2. 217 239 - T 11-10-2018 VSVS12_03165 3b93983ea9c6e044aa2f86cde977389e 280 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 11-10-2018 VSVS12_03165 3b93983ea9c6e044aa2f86cde977389e 280 Gene3D G3DSA:3.40.50.1000 5 263 2.6E-57 T 11-10-2018 IPR023214 HAD superfamily VSVS12_03165 3b93983ea9c6e044aa2f86cde977389e 280 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 263 2.9E-56 T 11-10-2018 VSVS12_03165 3b93983ea9c6e044aa2f86cde977389e 280 Gene3D G3DSA:3.30.1240.10 84 192 2.6E-57 T 11-10-2018 VSVS12_00298 2f1955fb6345b2776fcd4448f6fa5832 163 Gene3D G3DSA:3.30.1360.100 85 163 4.1E-30 T 11-10-2018 VSVS12_00298 2f1955fb6345b2776fcd4448f6fa5832 163 SUPERFAMILY SSF103054 87 162 1.01E-22 T 11-10-2018 IPR023229 Type II secretion system protein M, periplasmic domain superfamily VSVS12_00298 2f1955fb6345b2776fcd4448f6fa5832 163 PIRSF PIRSF006291 3 163 4.5E-39 T 11-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 VSVS12_00298 2f1955fb6345b2776fcd4448f6fa5832 163 Pfam PF04612 Type II secretion system (T2SS), protein M 6 162 2.9E-48 T 11-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 VSVS12_01590 dc7cc506af9439c88dd7117cffb32a3e 258 SUPERFAMILY SSF81301 64 217 6.7E-16 T 11-10-2018 VSVS12_01590 dc7cc506af9439c88dd7117cffb32a3e 258 Gene3D G3DSA:3.30.460.10 73 195 6.1E-6 T 11-10-2018 VSVS12_04120 74311ab33f6d1d7b6926a168b3fa0c00 686 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 154 546 8.6E-62 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain VSVS12_04120 74311ab33f6d1d7b6926a168b3fa0c00 686 Gene3D G3DSA:3.10.105.10 385 627 1.8E-26 T 11-10-2018 VSVS12_04120 74311ab33f6d1d7b6926a168b3fa0c00 686 SUPERFAMILY SSF53850 103 652 3.08E-78 T 11-10-2018 VSVS12_04120 74311ab33f6d1d7b6926a168b3fa0c00 686 PIRSF PIRSF002741 141 659 5.2E-43 T 11-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 VSVS12_04120 74311ab33f6d1d7b6926a168b3fa0c00 686 Gene3D G3DSA:3.40.190.10 85 371 3.4E-48 T 11-10-2018 VSVS12_01113 5eaf18ea6fccf72dd86c9c761df8ff9c 142 Gene3D G3DSA:1.10.10.10 4 70 1.4E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_01113 5eaf18ea6fccf72dd86c9c761df8ff9c 142 SMART SM00345 12 70 3.6E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VSVS12_01113 5eaf18ea6fccf72dd86c9c761df8ff9c 142 SUPERFAMILY SSF48008 76 120 3.66E-6 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VSVS12_01113 5eaf18ea6fccf72dd86c9c761df8ff9c 142 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 70 2.1E-14 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VSVS12_01113 5eaf18ea6fccf72dd86c9c761df8ff9c 142 SUPERFAMILY SSF46785 4 74 7.52E-16 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_01113 5eaf18ea6fccf72dd86c9c761df8ff9c 142 Gene3D G3DSA:1.20.120.530 74 127 9.0E-7 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VSVS12_00626 25311be9f1dac46d9d522f2a25ae8e95 145 PRINTS PR01438 Universal stress protein signature 102 114 3.7E-11 T 11-10-2018 IPR006015 Universal stress protein A VSVS12_00626 25311be9f1dac46d9d522f2a25ae8e95 145 PRINTS PR01438 Universal stress protein signature 2 20 3.7E-11 T 11-10-2018 IPR006015 Universal stress protein A VSVS12_00626 25311be9f1dac46d9d522f2a25ae8e95 145 PRINTS PR01438 Universal stress protein signature 120 142 3.7E-11 T 11-10-2018 IPR006015 Universal stress protein A VSVS12_00626 25311be9f1dac46d9d522f2a25ae8e95 145 PIRSF PIRSF006276 1 145 2.3E-18 T 11-10-2018 IPR006015 Universal stress protein A VSVS12_00626 25311be9f1dac46d9d522f2a25ae8e95 145 Gene3D G3DSA:3.40.50.620 1 142 2.8E-36 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VSVS12_00626 25311be9f1dac46d9d522f2a25ae8e95 145 Pfam PF00582 Universal stress protein family 1 142 4.3E-30 T 11-10-2018 IPR006016 UspA VSVS12_00626 25311be9f1dac46d9d522f2a25ae8e95 145 SUPERFAMILY SSF52402 2 143 8.37E-35 T 11-10-2018 VSVS12_04254 4a4bb4e745100e5f71d9c00e1fec83e9 116 Gene3D G3DSA:1.10.260.40 2 82 5.8E-12 T 11-10-2018 VSVS12_04254 4a4bb4e745100e5f71d9c00e1fec83e9 116 SUPERFAMILY SSF47413 4 76 1.8E-16 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VSVS12_01476 cb793967f2b2f0b516af15fff8d8f14a 302 Gene3D G3DSA:3.40.190.10 166 266 5.0E-45 T 11-10-2018 VSVS12_01476 cb793967f2b2f0b516af15fff8d8f14a 302 Gene3D G3DSA:1.10.10.10 1 86 8.6E-20 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_01476 cb793967f2b2f0b516af15fff8d8f14a 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 2 60 3.9E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_01476 cb793967f2b2f0b516af15fff8d8f14a 302 SUPERFAMILY SSF46785 3 109 1.03E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_01476 cb793967f2b2f0b516af15fff8d8f14a 302 Gene3D G3DSA:3.40.190.10 89 292 5.0E-45 T 11-10-2018 VSVS12_01476 cb793967f2b2f0b516af15fff8d8f14a 302 SUPERFAMILY SSF53850 87 298 1.45E-36 T 11-10-2018 VSVS12_01476 cb793967f2b2f0b516af15fff8d8f14a 302 Pfam PF03466 LysR substrate binding domain 87 294 5.1E-32 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_00191 75b3ed2d196f8ea8fb3357f2d052998c 85 SUPERFAMILY SSF81333 3 78 1.83E-19 T 11-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily VSVS12_00191 75b3ed2d196f8ea8fb3357f2d052998c 85 ProSitePatterns PS00605 ATP synthase c subunit signature. 39 60 - T 11-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VSVS12_00191 75b3ed2d196f8ea8fb3357f2d052998c 85 Gene3D G3DSA:1.20.20.10 1 77 1.2E-27 T 11-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VSVS12_00191 75b3ed2d196f8ea8fb3357f2d052998c 85 Hamap MF_01396 ATP synthase subunit c [atpH]. 9 74 13.874 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VSVS12_00191 75b3ed2d196f8ea8fb3357f2d052998c 85 Pfam PF00137 ATP synthase subunit C 10 72 1.4E-10 T 11-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 VSVS12_00191 75b3ed2d196f8ea8fb3357f2d052998c 85 PRINTS PR00124 ATP synthase C subunit signature 11 30 1.8E-6 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VSVS12_00191 75b3ed2d196f8ea8fb3357f2d052998c 85 PRINTS PR00124 ATP synthase C subunit signature 49 74 1.8E-6 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VSVS12_00191 75b3ed2d196f8ea8fb3357f2d052998c 85 PRINTS PR00124 ATP synthase C subunit signature 32 47 1.8E-6 T 11-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VSVS12_00191 75b3ed2d196f8ea8fb3357f2d052998c 85 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 19 76 1.3E-30 T 11-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 VSVS12_03340 ac5a0564ee18c54ab4ce38077a609f79 107 Gene3D G3DSA:2.60.120.10 14 106 3.3E-34 T 11-10-2018 IPR014710 RmlC-like jelly roll fold VSVS12_03340 ac5a0564ee18c54ab4ce38077a609f79 107 Pfam PF07883 Cupin domain 45 101 2.9E-9 T 11-10-2018 IPR013096 Cupin 2, conserved barrel VSVS12_03340 ac5a0564ee18c54ab4ce38077a609f79 107 SUPERFAMILY SSF51182 1 105 2.28E-18 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily VSVS12_00477 ad46826a57c9842289f5e20a645e30fb 232 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 1.7E-41 T 11-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00477 ad46826a57c9842289f5e20a645e30fb 232 Gene3D G3DSA:3.30.300.20 17 107 1.1E-28 T 11-10-2018 IPR015946 K homology domain-like, alpha/beta VSVS12_00477 ad46826a57c9842289f5e20a645e30fb 232 Gene3D G3DSA:3.30.1140.32 108 208 1.9E-45 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00477 ad46826a57c9842289f5e20a645e30fb 232 SUPERFAMILY SSF54814 2 106 3.4E-36 T 11-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 VSVS12_00477 ad46826a57c9842289f5e20a645e30fb 232 SMART SM00322 60 125 7.7E-8 T 11-10-2018 IPR004087 K Homology domain GO:0003676 VSVS12_00477 ad46826a57c9842289f5e20a645e30fb 232 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 11-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00477 ad46826a57c9842289f5e20a645e30fb 232 SUPERFAMILY SSF54821 108 206 6.02E-41 T 11-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00477 ad46826a57c9842289f5e20a645e30fb 232 Pfam PF07650 KH domain 38 111 1.5E-18 T 11-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00477 ad46826a57c9842289f5e20a645e30fb 232 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 9.1E-98 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 VSVS12_00477 ad46826a57c9842289f5e20a645e30fb 232 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.884 T 11-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 VSVS12_01565 c7949506de6f3d2a3bce95c9a9776fab 357 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 164 275 1.2E-12 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VSVS12_01565 c7949506de6f3d2a3bce95c9a9776fab 357 Gene3D G3DSA:3.10.180.10 158 355 8.8E-69 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VSVS12_01565 c7949506de6f3d2a3bce95c9a9776fab 357 PIRSF PIRSF009283 1 355 1.1E-120 T 11-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 VSVS12_01565 c7949506de6f3d2a3bce95c9a9776fab 357 Gene3D G3DSA:3.10.180.10 2 155 5.0E-44 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VSVS12_01565 c7949506de6f3d2a3bce95c9a9776fab 357 Pfam PF14696 Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal 6 143 1.2E-53 T 11-10-2018 VSVS12_01565 c7949506de6f3d2a3bce95c9a9776fab 357 TIGRFAM TIGR01263 4HPPD: 4-hydroxyphenylpyruvate dioxygenase 12 354 5.8E-127 T 11-10-2018 IPR005956 4-hydroxyphenylpyruvate dioxygenase GO:0003868|GO:0009072|GO:0016701|GO:0055114 VSVS12_01565 c7949506de6f3d2a3bce95c9a9776fab 357 SUPERFAMILY SSF54593 5 341 4.83E-73 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VSVS12_01031 41832b6968e85144a7fbc5f79d40d3c2 505 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 285 297 1.3E-12 T 11-10-2018 VSVS12_01031 41832b6968e85144a7fbc5f79d40d3c2 505 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 183 199 1.3E-12 T 11-10-2018 VSVS12_01031 41832b6968e85144a7fbc5f79d40d3c2 505 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 207 221 1.3E-12 T 11-10-2018 VSVS12_01031 41832b6968e85144a7fbc5f79d40d3c2 505 Gene3D G3DSA:1.20.1260.30 2 177 6.0E-35 T 11-10-2018 IPR038333 N6 adenine-specific DNA methyltransferase, N-terminal domain superfamily VSVS12_01031 41832b6968e85144a7fbc5f79d40d3c2 505 Pfam PF12161 HsdM N-terminal domain 12 145 5.7E-22 T 11-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain VSVS12_01031 41832b6968e85144a7fbc5f79d40d3c2 505 SUPERFAMILY SSF53335 10 504 1.21E-138 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_01031 41832b6968e85144a7fbc5f79d40d3c2 505 Pfam PF02384 N-6 DNA Methylase 160 468 4.9E-108 T 11-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 VSVS12_01031 41832b6968e85144a7fbc5f79d40d3c2 505 Gene3D G3DSA:3.40.50.150 181 463 8.5E-86 T 11-10-2018 VSVS12_01031 41832b6968e85144a7fbc5f79d40d3c2 505 TIGRFAM TIGR00497 hsdM: type I restriction-modification system, M subunit 8 479 3.1E-87 T 11-10-2018 IPR004546 Restriction endonuclease, type I, HsdM GO:0003677|GO:0009007|GO:0009307 VSVS12_01785 b7a17529cb522799ee67ce4dfc52eb22 212 Pfam PF02397 Bacterial sugar transferase 14 207 3.9E-62 T 11-10-2018 IPR003362 Bacterial sugar transferase VSVS12_03344 c01483e54a6929fc0b014841d70a02aa 182 SUPERFAMILY SSF52218 3 128 5.28E-24 T 11-10-2018 IPR029039 Flavoprotein-like superfamily VSVS12_03344 c01483e54a6929fc0b014841d70a02aa 182 Pfam PF03358 NADPH-dependent FMN reductase 3 116 5.5E-18 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 VSVS12_03344 c01483e54a6929fc0b014841d70a02aa 182 Gene3D G3DSA:3.40.50.360 1 170 1.4E-27 T 11-10-2018 IPR029039 Flavoprotein-like superfamily VSVS12_02375 ed90be7a8487672f48d7f68ad262b13b 179 SUPERFAMILY SSF47598 1 34 1.11E-13 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 VSVS12_02375 ed90be7a8487672f48d7f68ad262b13b 179 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 179 40.99 T 11-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 VSVS12_02375 ed90be7a8487672f48d7f68ad262b13b 179 PIRSF PIRSF019401 1 179 8.2E-52 T 11-10-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 VSVS12_02375 ed90be7a8487672f48d7f68ad262b13b 179 Pfam PF17206 SeqA protein N-terminal domain 1 36 3.2E-24 T 11-10-2018 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal VSVS12_02375 ed90be7a8487672f48d7f68ad262b13b 179 Gene3D G3DSA:1.10.1220.10 1 41 9.1E-24 T 11-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 VSVS12_02375 ed90be7a8487672f48d7f68ad262b13b 179 Pfam PF03925 SeqA protein C-terminal domain 70 176 9.8E-46 T 11-10-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 VSVS12_02375 ed90be7a8487672f48d7f68ad262b13b 179 SUPERFAMILY SSF82808 65 177 8.5E-48 T 11-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 VSVS12_02375 ed90be7a8487672f48d7f68ad262b13b 179 Gene3D G3DSA:1.20.1380.10 64 179 5.7E-47 T 11-10-2018 IPR036835 Replication modulator SeqA, C-terminal DNA-binding domain superfamily GO:0003677 VSVS12_02240 bb77ab8ca534b75c76057231d78c4102 652 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 2.1E-95 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VSVS12_02240 bb77ab8ca534b75c76057231d78c4102 652 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 2.1E-95 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VSVS12_02240 bb77ab8ca534b75c76057231d78c4102 652 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 2.1E-95 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VSVS12_02240 bb77ab8ca534b75c76057231d78c4102 652 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 2.1E-95 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VSVS12_02240 bb77ab8ca534b75c76057231d78c4102 652 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 2.1E-95 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VSVS12_02240 bb77ab8ca534b75c76057231d78c4102 652 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 2.1E-95 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VSVS12_02240 bb77ab8ca534b75c76057231d78c4102 652 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 2.1E-95 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VSVS12_02240 bb77ab8ca534b75c76057231d78c4102 652 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 2.1E-95 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VSVS12_02240 bb77ab8ca534b75c76057231d78c4102 652 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 639 4.8E-125 T 11-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal VSVS12_02240 bb77ab8ca534b75c76057231d78c4102 652 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 1.5E-62 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VSVS12_02240 bb77ab8ca534b75c76057231d78c4102 652 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 1.5E-62 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VSVS12_02240 bb77ab8ca534b75c76057231d78c4102 652 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 632 645 1.5E-62 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VSVS12_02240 bb77ab8ca534b75c76057231d78c4102 652 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 1.5E-62 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VSVS12_02240 bb77ab8ca534b75c76057231d78c4102 652 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 1.5E-62 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VSVS12_02240 bb77ab8ca534b75c76057231d78c4102 652 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 1.5E-62 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VSVS12_02240 bb77ab8ca534b75c76057231d78c4102 652 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 1.5E-62 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VSVS12_02240 bb77ab8ca534b75c76057231d78c4102 652 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 642 4.0E-254 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VSVS12_02240 bb77ab8ca534b75c76057231d78c4102 652 Pfam PF01578 Cytochrome C assembly protein 89 297 8.4E-54 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 VSVS12_01787 858c6eb9f847cc108f418393a54b2485 441 SUPERFAMILY SSF55073 292 436 1.1E-35 T 11-10-2018 IPR029787 Nucleotide cyclase VSVS12_01787 858c6eb9f847cc108f418393a54b2485 441 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 286 433 6.8E-36 T 11-10-2018 IPR000160 GGDEF domain VSVS12_01787 858c6eb9f847cc108f418393a54b2485 441 SMART SM00267 276 434 7.4E-42 T 11-10-2018 IPR000160 GGDEF domain VSVS12_01787 858c6eb9f847cc108f418393a54b2485 441 Gene3D G3DSA:3.30.70.270 286 440 6.0E-42 T 11-10-2018 VSVS12_01787 858c6eb9f847cc108f418393a54b2485 441 Pfam PF00990 Diguanylate cyclase, GGDEF domain 289 430 2.4E-33 T 11-10-2018 IPR000160 GGDEF domain VSVS12_04111 d5a11a589ebee1942f409585e022935c 308 SMART SM00342 215 298 4.6E-25 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VSVS12_04111 d5a11a589ebee1942f409585e022935c 308 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 282 298 2.1E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VSVS12_04111 d5a11a589ebee1942f409585e022935c 308 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 267 282 2.1E-6 T 11-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 VSVS12_04111 d5a11a589ebee1942f409585e022935c 308 Pfam PF12833 Helix-turn-helix domain 221 299 1.3E-18 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VSVS12_04111 d5a11a589ebee1942f409585e022935c 308 SUPERFAMILY SSF51182 23 99 7.34E-9 T 11-10-2018 IPR011051 RmlC-like cupin domain superfamily VSVS12_04111 d5a11a589ebee1942f409585e022935c 308 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 252 294 - T 11-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 VSVS12_04111 d5a11a589ebee1942f409585e022935c 308 Gene3D G3DSA:1.10.10.60 249 303 1.5E-18 T 11-10-2018 VSVS12_04111 d5a11a589ebee1942f409585e022935c 308 Gene3D G3DSA:2.60.120.10 27 109 3.8E-7 T 11-10-2018 IPR014710 RmlC-like jelly roll fold VSVS12_04111 d5a11a589ebee1942f409585e022935c 308 Gene3D G3DSA:1.10.10.60 196 248 1.0E-11 T 11-10-2018 VSVS12_04111 d5a11a589ebee1942f409585e022935c 308 SUPERFAMILY SSF46689 251 299 9.86E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_01812 ccfcfadad04c7de56ea3d659bfcebb42 367 TIGRFAM TIGR02735 purC_vibrio: phosphoribosylaminoimidazole-succinocarboxamide synthase 2 366 4.1E-216 T 11-10-2018 IPR014106 Phosphoribosylaminoimidazole-succinocarboxamide synthase, Vibrio-type GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 VSVS12_01812 ccfcfadad04c7de56ea3d659bfcebb42 367 Gene3D G3DSA:3.30.200.20 12 128 4.3E-24 T 11-10-2018 VSVS12_01812 ccfcfadad04c7de56ea3d659bfcebb42 367 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 19 342 21.201 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VSVS12_01812 ccfcfadad04c7de56ea3d659bfcebb42 367 Pfam PF01259 SAICAR synthetase 22 293 8.3E-47 T 11-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 VSVS12_01812 ccfcfadad04c7de56ea3d659bfcebb42 367 Gene3D G3DSA:3.30.470.20 129 284 4.5E-37 T 11-10-2018 VSVS12_01812 ccfcfadad04c7de56ea3d659bfcebb42 367 SUPERFAMILY SSF56104 14 344 2.19E-66 T 11-10-2018 VSVS12_00480 64aac11daf28992b9cd7d8970ce81350 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 80 25.325 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00480 64aac11daf28992b9cd7d8970ce81350 84 SUPERFAMILY SSF50249 6 83 1.71E-33 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_00480 64aac11daf28992b9cd7d8970ce81350 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 3.7E-14 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00480 64aac11daf28992b9cd7d8970ce81350 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 3.7E-14 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00480 64aac11daf28992b9cd7d8970ce81350 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 3.7E-14 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00480 64aac11daf28992b9cd7d8970ce81350 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 5 76 6.2E-38 T 11-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00480 64aac11daf28992b9cd7d8970ce81350 84 Pfam PF00366 Ribosomal protein S17 10 76 4.9E-34 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00480 64aac11daf28992b9cd7d8970ce81350 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 5 76 2.0E-35 T 11-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00480 64aac11daf28992b9cd7d8970ce81350 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 11-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_00480 64aac11daf28992b9cd7d8970ce81350 84 Gene3D G3DSA:2.40.50.140 1 83 7.5E-38 T 11-10-2018 VSVS12_03583 fa7f7950bb75b81f4b117b1e7b6deec3 222 Gene3D G3DSA:2.30.30.40 59 125 1.7E-5 T 11-10-2018 VSVS12_02029 f076ec2e6d5a1bb11cb0c2b4f1c46539 147 Gene3D G3DSA:2.40.128.270 40 143 6.4E-30 T 11-10-2018 IPR038670 HslJ-like superfamily VSVS12_02029 f076ec2e6d5a1bb11cb0c2b4f1c46539 147 Pfam PF03724 META domain 34 141 2.6E-26 T 11-10-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ VSVS12_03374 e4387b6c448fe49bf3a93135e8a10eb0 445 Pfam PF03313 Serine dehydratase alpha chain 182 439 4.7E-53 T 11-10-2018 IPR005130 Serine dehydratase-like, alpha subunit VSVS12_03374 e4387b6c448fe49bf3a93135e8a10eb0 445 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 5 444 35.147 T 11-10-2018 IPR021144 Uncharacterised protein family UPF0597 VSVS12_03374 e4387b6c448fe49bf3a93135e8a10eb0 445 PIRSF PIRSF006054 2 445 1.1E-151 T 11-10-2018 IPR021144 Uncharacterised protein family UPF0597 VSVS12_00498 8962da0bb067256da11dfdff00fdb0dc 161 Pfam PF11075 Protein of unknown function VcgC/VcgE (DUF2780) 23 153 4.0E-21 T 11-10-2018 IPR021302 Protein of unknown function DUF2780, VcgC/VcgE VSVS12_02379 8fb2e802349e7f93678c5f14ee18665b 164 Gene3D G3DSA:3.10.129.10 14 157 2.6E-27 T 11-10-2018 VSVS12_02379 8fb2e802349e7f93678c5f14ee18665b 164 SUPERFAMILY SSF54637 12 156 3.23E-23 T 11-10-2018 IPR029069 HotDog domain superfamily VSVS12_02379 8fb2e802349e7f93678c5f14ee18665b 164 Pfam PF14539 Domain of unknown function (DUF4442) 13 151 6.6E-24 T 11-10-2018 IPR027961 Protein of unknown function DUF4442 VSVS12_01181 5f6903c5baeba9fb282090de0e95659b 469 SMART SM00729 82 305 2.9E-40 T 11-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 VSVS12_01181 5f6903c5baeba9fb282090de0e95659b 469 Pfam PF04055 Radical SAM superfamily 87 254 3.8E-11 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VSVS12_01181 5f6903c5baeba9fb282090de0e95659b 469 SUPERFAMILY SSF102114 77 454 3.27E-82 T 11-10-2018 VSVS12_01181 5f6903c5baeba9fb282090de0e95659b 469 TIGRFAM TIGR04107 rSAM_HutW: putative heme utilization radical SAM enzyme HutW 44 458 5.1E-165 T 11-10-2018 IPR026332 Putative heme utilization radical SAM enzyme HutW VSVS12_01181 5f6903c5baeba9fb282090de0e95659b 469 Gene3D G3DSA:3.80.30.20 58 384 1.1E-80 T 11-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe VSVS12_00834 b95bc8883f19c01998a22a44ba9ca690 334 SUPERFAMILY SSF143631 23 332 2.88E-101 T 11-10-2018 IPR003374 ApbE-like superfamily VSVS12_00834 b95bc8883f19c01998a22a44ba9ca690 334 Pfam PF02424 ApbE family 31 310 5.7E-86 T 11-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 VSVS12_00834 b95bc8883f19c01998a22a44ba9ca690 334 PIRSF PIRSF006268 1 334 1.5E-94 T 11-10-2018 IPR024932 Flavin transferase ApbE GO:0017013 VSVS12_00834 b95bc8883f19c01998a22a44ba9ca690 334 Gene3D G3DSA:3.10.520.20 17 334 7.2E-113 T 11-10-2018 VSVS12_00048 0676ca97c306d9d14a4ebacf4f06a2b8 136 Gene3D G3DSA:1.10.10.60 19 105 6.2E-6 T 11-10-2018 VSVS12_00048 0676ca97c306d9d14a4ebacf4f06a2b8 136 SUPERFAMILY SSF46689 13 110 1.52E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_04281 408c83fab84cdfcbf8882774197096b3 372 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 268 362 8.1E-21 T 11-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 VSVS12_04281 408c83fab84cdfcbf8882774197096b3 372 SUPERFAMILY SSF101790 279 371 3.6E-25 T 11-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal VSVS12_04281 408c83fab84cdfcbf8882774197096b3 372 Gene3D G3DSA:4.10.1250.10 233 281 4.6E-20 T 11-10-2018 VSVS12_04281 408c83fab84cdfcbf8882774197096b3 372 Gene3D G3DSA:2.40.30.110 284 361 1.8E-28 T 11-10-2018 VSVS12_04281 408c83fab84cdfcbf8882774197096b3 372 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 6 366 1.1E-108 T 11-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 VSVS12_04281 408c83fab84cdfcbf8882774197096b3 372 PIRSF PIRSF006487 1 371 1.2E-81 T 11-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 VSVS12_04281 408c83fab84cdfcbf8882774197096b3 372 Gene3D G3DSA:3.30.1360.120 9 231 2.5E-85 T 11-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 VSVS12_04281 408c83fab84cdfcbf8882774197096b3 372 SUPERFAMILY SSF103025 6 280 7.06E-90 T 11-10-2018 VSVS12_04281 408c83fab84cdfcbf8882774197096b3 372 Pfam PF01571 Aminomethyltransferase folate-binding domain 10 254 1.5E-88 T 11-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain VSVS12_04281 408c83fab84cdfcbf8882774197096b3 372 Gene3D G3DSA:3.30.70.1400 56 140 2.5E-85 T 11-10-2018 VSVS12_01267 c82988a44c3cbf807b13d7eb90c3ab1a 397 Pfam PF01979 Amidohydrolase family 55 383 8.8E-25 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VSVS12_01267 c82988a44c3cbf807b13d7eb90c3ab1a 397 SUPERFAMILY SSF51338 11 385 2.7E-9 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VSVS12_01267 c82988a44c3cbf807b13d7eb90c3ab1a 397 Gene3D G3DSA:2.30.40.10 17 381 9.6E-126 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VSVS12_01267 c82988a44c3cbf807b13d7eb90c3ab1a 397 PIRSF PIRSF038994 7 387 2.1E-124 T 11-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 VSVS12_01267 c82988a44c3cbf807b13d7eb90c3ab1a 397 Gene3D G3DSA:3.20.20.140 58 354 9.6E-126 T 11-10-2018 VSVS12_01267 c82988a44c3cbf807b13d7eb90c3ab1a 397 SUPERFAMILY SSF51556 58 354 1.21E-101 T 11-10-2018 IPR032466 Metal-dependent hydrolase VSVS12_01267 c82988a44c3cbf807b13d7eb90c3ab1a 397 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 13 380 3.7E-94 T 11-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 VSVS12_04130 26e2f78e45e5ed186bbe9cfcdc250554 273 Gene3D G3DSA:3.40.190.10 30 270 2.3E-79 T 11-10-2018 VSVS12_04130 26e2f78e45e5ed186bbe9cfcdc250554 273 SUPERFAMILY SSF53850 25 272 7.95E-70 T 11-10-2018 VSVS12_04130 26e2f78e45e5ed186bbe9cfcdc250554 273 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 20 271 2.3E-75 T 11-10-2018 IPR011862 Phosphate binding protein GO:0042301 VSVS12_04130 26e2f78e45e5ed186bbe9cfcdc250554 273 Gene3D G3DSA:3.40.190.10 99 233 2.3E-79 T 11-10-2018 VSVS12_04130 26e2f78e45e5ed186bbe9cfcdc250554 273 Pfam PF12849 PBP superfamily domain 20 257 2.1E-40 T 11-10-2018 IPR024370 PBP domain VSVS12_03370 3e23d89baa6d893a718333e42dd05b3e 72 SMART SM00530 6 62 1.5E-6 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VSVS12_03370 3e23d89baa6d893a718333e42dd05b3e 72 Gene3D G3DSA:1.10.260.40 2 66 4.9E-9 T 11-10-2018 VSVS12_03370 3e23d89baa6d893a718333e42dd05b3e 72 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 6 67 1.4E-21 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VSVS12_03370 3e23d89baa6d893a718333e42dd05b3e 72 SUPERFAMILY SSF47413 1 66 3.38E-16 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VSVS12_01013 47897d2310ed2233b405eebd0afe6da3 553 Gene3D G3DSA:3.60.21.10 30 365 7.7E-125 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like VSVS12_01013 47897d2310ed2233b405eebd0afe6da3 553 Gene3D G3DSA:3.90.780.10 366 552 1.4E-59 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VSVS12_01013 47897d2310ed2233b405eebd0afe6da3 553 ProSitePatterns PS00785 5'-nucleotidase signature 1. 38 50 - T 11-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VSVS12_01013 47897d2310ed2233b405eebd0afe6da3 553 Pfam PF02872 5'-nucleotidase, C-terminal domain 366 512 3.1E-34 T 11-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VSVS12_01013 47897d2310ed2233b405eebd0afe6da3 553 ProSitePatterns PS00786 5'-nucleotidase signature 2. 113 124 - T 11-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VSVS12_01013 47897d2310ed2233b405eebd0afe6da3 553 SUPERFAMILY SSF56300 31 364 3.8E-97 T 11-10-2018 VSVS12_01013 47897d2310ed2233b405eebd0afe6da3 553 SUPERFAMILY SSF55816 366 543 1.31E-50 T 11-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VSVS12_01013 47897d2310ed2233b405eebd0afe6da3 553 PRINTS PR01607 Apyrase family signature 487 506 4.6E-54 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VSVS12_01013 47897d2310ed2233b405eebd0afe6da3 553 PRINTS PR01607 Apyrase family signature 420 443 4.6E-54 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VSVS12_01013 47897d2310ed2233b405eebd0afe6da3 553 PRINTS PR01607 Apyrase family signature 211 228 4.6E-54 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VSVS12_01013 47897d2310ed2233b405eebd0afe6da3 553 PRINTS PR01607 Apyrase family signature 242 265 4.6E-54 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VSVS12_01013 47897d2310ed2233b405eebd0afe6da3 553 PRINTS PR01607 Apyrase family signature 36 54 4.6E-54 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VSVS12_01013 47897d2310ed2233b405eebd0afe6da3 553 PRINTS PR01607 Apyrase family signature 287 307 4.6E-54 T 11-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 VSVS12_01013 47897d2310ed2233b405eebd0afe6da3 553 Pfam PF00149 Calcineurin-like phosphoesterase 38 259 5.7E-21 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VSVS12_04376 1026c51007e2ec10addbfd14978639c8 114 Pfam PF01609 Transposase DDE domain 44 108 4.1E-8 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_02376 690c6d8d3dda76e505adc48edc8e9f5b 254 Gene3D G3DSA:3.40.50.1820 2 254 1.4E-66 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold VSVS12_02376 690c6d8d3dda76e505adc48edc8e9f5b 254 SUPERFAMILY SSF53474 4 253 1.59E-50 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold VSVS12_02376 690c6d8d3dda76e505adc48edc8e9f5b 254 Pfam PF12697 Alpha/beta hydrolase family 16 246 1.9E-24 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VSVS12_02376 690c6d8d3dda76e505adc48edc8e9f5b 254 PRINTS PR00412 Epoxide hydrolase signature 39 54 3.4E-6 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VSVS12_02376 690c6d8d3dda76e505adc48edc8e9f5b 254 PRINTS PR00412 Epoxide hydrolase signature 82 95 3.4E-6 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VSVS12_02376 690c6d8d3dda76e505adc48edc8e9f5b 254 PRINTS PR00412 Epoxide hydrolase signature 230 252 3.4E-6 T 11-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 VSVS12_01686 2459979e808a4326f56d73297216fec9 159 Pfam PF05751 FixH 7 147 8.7E-39 T 11-10-2018 IPR008620 Nitrogen fixation protein FixH VSVS12_01458 52748e3518de123cd351e9a1a64ec4fc 283 Gene3D G3DSA:1.10.10.10 1 78 1.1E-16 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_01458 52748e3518de123cd351e9a1a64ec4fc 283 SUPERFAMILY SSF46689 3 73 4.48E-13 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_01458 52748e3518de123cd351e9a1a64ec4fc 283 Pfam PF01418 Helix-turn-helix domain, rpiR family 5 76 1.9E-16 T 11-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 VSVS12_01458 52748e3518de123cd351e9a1a64ec4fc 283 Pfam PF01380 SIS domain 130 257 1.3E-19 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VSVS12_01458 52748e3518de123cd351e9a1a64ec4fc 283 Gene3D G3DSA:3.40.50.10490 98 273 2.1E-40 T 11-10-2018 VSVS12_01458 52748e3518de123cd351e9a1a64ec4fc 283 SUPERFAMILY SSF53697 95 263 2.36E-36 T 11-10-2018 VSVS12_03377 0eba3bc5b2b128f2d3af3fe0ad252d17 378 Gene3D G3DSA:2.40.170.20 3 373 2.3E-30 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VSVS12_03377 0eba3bc5b2b128f2d3af3fe0ad252d17 378 Pfam PF00593 TonB dependent receptor 27 343 7.6E-18 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VSVS12_03377 0eba3bc5b2b128f2d3af3fe0ad252d17 378 SUPERFAMILY SSF56935 8 341 5.49E-31 T 11-10-2018 VSVS12_02247 ad42a92f79927b6e916029af4126633f 164 Gene3D G3DSA:2.40.50.180 39 148 6.5E-43 T 11-10-2018 VSVS12_02247 ad42a92f79927b6e916029af4126633f 164 Pfam PF01584 CheW-like domain 20 156 1.7E-39 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VSVS12_02247 ad42a92f79927b6e916029af4126633f 164 SMART SM00260 16 153 4.2E-49 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VSVS12_02247 ad42a92f79927b6e916029af4126633f 164 SUPERFAMILY SSF50341 14 158 1.26E-41 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VSVS12_02247 ad42a92f79927b6e916029af4126633f 164 Gene3D G3DSA:2.30.30.40 22 147 6.5E-43 T 11-10-2018 VSVS12_02896 700955a67c4f3fdb8f43f79c450f53cb 130 Gene3D G3DSA:3.40.1260.10 1 130 5.0E-51 T 11-10-2018 IPR027396 DsrEFH-like VSVS12_02896 700955a67c4f3fdb8f43f79c450f53cb 130 SUPERFAMILY SSF75169 5 130 6.08E-37 T 11-10-2018 IPR027396 DsrEFH-like VSVS12_02896 700955a67c4f3fdb8f43f79c450f53cb 130 Pfam PF02635 DsrE/DsrF-like family 5 130 2.3E-26 T 11-10-2018 IPR003787 Sulphur relay, DsrE/F-like protein VSVS12_02896 700955a67c4f3fdb8f43f79c450f53cb 130 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 4 130 3.9E-53 T 11-10-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 VSVS12_00833 ac886a30fdc8dc9121a4f5698ba10c41 408 SUPERFAMILY SSF52343 259 403 3.93E-35 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VSVS12_00833 ac886a30fdc8dc9121a4f5698ba10c41 408 PIRSF PIRSF000044 1 408 3.7E-215 T 11-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 VSVS12_00833 ac886a30fdc8dc9121a4f5698ba10c41 408 Gene3D G3DSA:2.40.30.10 127 265 7.0E-51 T 11-10-2018 VSVS12_00833 ac886a30fdc8dc9121a4f5698ba10c41 408 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 243 252 8.2E-6 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VSVS12_00833 ac886a30fdc8dc9121a4f5698ba10c41 408 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 210 217 8.2E-6 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VSVS12_00833 ac886a30fdc8dc9121a4f5698ba10c41 408 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 374 382 8.2E-6 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VSVS12_00833 ac886a30fdc8dc9121a4f5698ba10c41 408 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 277 296 8.2E-6 T 11-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 VSVS12_00833 ac886a30fdc8dc9121a4f5698ba10c41 408 Gene3D G3DSA:3.10.20.30 35 126 1.9E-32 T 11-10-2018 IPR012675 Beta-grasp domain superfamily VSVS12_00833 ac886a30fdc8dc9121a4f5698ba10c41 408 SUPERFAMILY SSF54292 40 125 1.71E-21 T 11-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 VSVS12_00833 ac886a30fdc8dc9121a4f5698ba10c41 408 Gene3D G3DSA:3.40.50.80 276 394 1.9E-29 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VSVS12_00833 ac886a30fdc8dc9121a4f5698ba10c41 408 Pfam PF00970 Oxidoreductase FAD-binding domain 203 267 6.0E-10 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 VSVS12_00833 ac886a30fdc8dc9121a4f5698ba10c41 408 Pfam PF00175 Oxidoreductase NAD-binding domain 278 386 4.5E-16 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VSVS12_00833 ac886a30fdc8dc9121a4f5698ba10c41 408 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 41 116 1.7E-10 T 11-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 VSVS12_00833 ac886a30fdc8dc9121a4f5698ba10c41 408 Hamap MF_00430 Na(+)-translocating NADH-quinone reductase subunit F [nqrF]. 2 408 61.987 T 11-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 VSVS12_00833 ac886a30fdc8dc9121a4f5698ba10c41 408 TIGRFAM TIGR01941 nqrF: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit 4 408 6.0E-224 T 11-10-2018 IPR010205 Na(+)-translocating NADH-quinone reductase subunit F GO:0006814|GO:0016021|GO:0016655|GO:0051537|GO:0055114 VSVS12_00833 ac886a30fdc8dc9121a4f5698ba10c41 408 SUPERFAMILY SSF63380 106 273 8.2E-37 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VSVS12_02691 b3407838fd69a86270607a996dcbda1b 443 PIRSF PIRSF006351 4 434 1.8E-139 T 11-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 VSVS12_02691 b3407838fd69a86270607a996dcbda1b 443 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 16 424 9.2E-109 T 11-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 VSVS12_02691 b3407838fd69a86270607a996dcbda1b 443 Pfam PF02378 Phosphotransferase system, EIIC 32 351 2.3E-61 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VSVS12_02939 a96ed43cbd381d6d3f3e24c009f85b17 233 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 228 6.1E-106 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 VSVS12_02939 a96ed43cbd381d6d3f3e24c009f85b17 233 Gene3D G3DSA:3.30.190.20 21 225 5.3E-80 T 11-10-2018 VSVS12_02939 a96ed43cbd381d6d3f3e24c009f85b17 233 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.095 T 11-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 VSVS12_02939 a96ed43cbd381d6d3f3e24c009f85b17 233 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 11-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_02939 a96ed43cbd381d6d3f3e24c009f85b17 233 PIRSF PIRSF002155 1 227 1.1E-78 T 11-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_02939 a96ed43cbd381d6d3f3e24c009f85b17 233 Gene3D G3DSA:3.40.50.790 68 159 5.3E-80 T 11-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich VSVS12_02939 a96ed43cbd381d6d3f3e24c009f85b17 233 SUPERFAMILY SSF56808 6 225 5.23E-82 T 11-10-2018 IPR023674 Ribosomal protein L1-like VSVS12_02939 a96ed43cbd381d6d3f3e24c009f85b17 233 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 1.3E-50 T 11-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein VSVS12_00138 18cc29f6d8937e119fba2f73f7b19395 375 Pfam PF14350 Beta protein 10 358 1.1E-50 T 11-10-2018 IPR025683 Protein beta VSVS12_02079 bf71b2e3aa9f83f8de92182d8d843b18 139 Gene3D G3DSA:3.10.450.50 6 124 8.9E-22 T 11-10-2018 VSVS12_02079 bf71b2e3aa9f83f8de92182d8d843b18 139 Pfam PF12680 SnoaL-like domain 10 108 3.0E-11 T 11-10-2018 IPR037401 SnoaL-like domain VSVS12_02079 bf71b2e3aa9f83f8de92182d8d843b18 139 SUPERFAMILY SSF54427 7 131 4.88E-22 T 11-10-2018 IPR032710 NTF2-like domain superfamily VSVS12_02249 1f2cdaa04a6894723a8c5b6662f52f58 258 PIRSF PIRSF009320 101 241 1.4E-8 T 11-10-2018 VSVS12_02249 1f2cdaa04a6894723a8c5b6662f52f58 258 PIRSF PIRSF009320 1 88 9.4E-15 T 11-10-2018 VSVS12_02249 1f2cdaa04a6894723a8c5b6662f52f58 258 Pfam PF13614 AAA domain 3 180 2.4E-51 T 11-10-2018 IPR025669 AAA domain VSVS12_02249 1f2cdaa04a6894723a8c5b6662f52f58 258 SUPERFAMILY SSF52540 1 253 2.99E-56 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02249 1f2cdaa04a6894723a8c5b6662f52f58 258 Gene3D G3DSA:3.40.50.300 1 255 1.6E-68 T 11-10-2018 VSVS12_00408 c218af370c47c3205354cd98cf91073c 220 Gene3D G3DSA:2.40.360.10 19 220 8.7E-65 T 11-10-2018 IPR023373 YmcC-like superfamily VSVS12_00408 c218af370c47c3205354cd98cf91073c 220 SUPERFAMILY SSF159270 21 219 6.67E-57 T 11-10-2018 IPR023373 YmcC-like superfamily VSVS12_00408 c218af370c47c3205354cd98cf91073c 220 Pfam PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF 16 215 1.7E-56 T 11-10-2018 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB VSVS12_04018 d7f4d741441834bdf2028e8899a8da7e 152 Gene3D G3DSA:3.40.630.30 1 144 1.1E-24 T 11-10-2018 VSVS12_04018 d7f4d741441834bdf2028e8899a8da7e 152 Pfam PF00583 Acetyltransferase (GNAT) family 23 134 2.6E-13 T 11-10-2018 IPR000182 GNAT domain VSVS12_04018 d7f4d741441834bdf2028e8899a8da7e 152 SUPERFAMILY SSF55729 17 138 8.97E-25 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_00578 71712b3256ce28ea9b9d956a6f6df387 366 Pfam PF00437 Type II/IV secretion system protein 10 266 5.9E-38 T 11-10-2018 IPR001482 Type II/IV secretion system protein VSVS12_00578 71712b3256ce28ea9b9d956a6f6df387 366 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 2 340 8.7E-128 T 11-10-2018 IPR006321 Pilus retraction protein PilT GO:0005524 VSVS12_00578 71712b3256ce28ea9b9d956a6f6df387 366 Gene3D G3DSA:3.40.50.300 97 352 7.0E-88 T 11-10-2018 VSVS12_00578 71712b3256ce28ea9b9d956a6f6df387 366 SUPERFAMILY SSF52540 2 332 5.11E-69 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00578 71712b3256ce28ea9b9d956a6f6df387 366 Gene3D G3DSA:3.30.450.90 1 95 9.5E-23 T 11-10-2018 VSVS12_04213 9358e82f47e6d1c840325887d693e5b2 271 Gene3D G3DSA:3.40.190.10 26 269 3.0E-74 T 11-10-2018 VSVS12_04213 9358e82f47e6d1c840325887d693e5b2 271 Pfam PF12727 PBP superfamily domain 40 253 4.4E-31 T 11-10-2018 IPR024370 PBP domain VSVS12_04213 9358e82f47e6d1c840325887d693e5b2 271 SUPERFAMILY SSF53850 24 270 5.98E-60 T 11-10-2018 VSVS12_04213 9358e82f47e6d1c840325887d693e5b2 271 Gene3D G3DSA:3.40.190.10 97 231 3.0E-74 T 11-10-2018 VSVS12_03814 1e55358e41b3f72a0e5418db6760fc48 195 PIRSF PIRSF011489 1 195 3.1E-76 T 11-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 VSVS12_03814 1e55358e41b3f72a0e5418db6760fc48 195 Pfam PF04336 Acyl carrier protein phosphodiesterase 81 185 3.2E-31 T 11-10-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 VSVS12_01419 ebbe1a76e9fa55bacc55a4d6a0f08d16 322 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 72 232 1.2E-54 T 11-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 VSVS12_01419 ebbe1a76e9fa55bacc55a4d6a0f08d16 322 SUPERFAMILY SSF55174 4 96 6.56E-12 T 11-10-2018 VSVS12_01419 ebbe1a76e9fa55bacc55a4d6a0f08d16 322 Gene3D G3DSA:3.30.70.580 70 228 1.6E-48 T 11-10-2018 VSVS12_01419 ebbe1a76e9fa55bacc55a4d6a0f08d16 322 SUPERFAMILY SSF55120 68 236 1.3E-41 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VSVS12_01419 ebbe1a76e9fa55bacc55a4d6a0f08d16 322 SMART SM00363 3 73 2.7E-9 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_01419 ebbe1a76e9fa55bacc55a4d6a0f08d16 322 Pfam PF01479 S4 domain 4 44 4.6E-10 T 11-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 VSVS12_01419 ebbe1a76e9fa55bacc55a4d6a0f08d16 322 Gene3D G3DSA:3.30.70.1560 130 220 1.6E-48 T 11-10-2018 VSVS12_01419 ebbe1a76e9fa55bacc55a4d6a0f08d16 322 Gene3D G3DSA:3.10.290.10 1 60 7.1E-20 T 11-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 VSVS12_01419 ebbe1a76e9fa55bacc55a4d6a0f08d16 322 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 106 120 - T 11-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 VSVS12_01419 ebbe1a76e9fa55bacc55a4d6a0f08d16 322 Pfam PF00849 RNA pseudouridylate synthase 68 196 6.3E-17 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VSVS12_03582 52b0d8da6b8a13c1659692efee8b3513 120 SUPERFAMILY SSF55248 26 118 1.7E-32 T 11-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 VSVS12_03582 52b0d8da6b8a13c1659692efee8b3513 120 Gene3D G3DSA:3.30.1360.20 25 120 6.6E-32 T 11-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 VSVS12_03582 52b0d8da6b8a13c1659692efee8b3513 120 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 28 118 3.4E-30 T 11-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 VSVS12_03582 52b0d8da6b8a13c1659692efee8b3513 120 Hamap MF_00434 Putative pterin-4-alpha-carbinolamine dehydratase. 24 119 20.886 T 11-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 VSVS12_03473 e97136688c2753dd1908892d2e4e05e1 323 SUPERFAMILY SSF103481 225 306 1.57E-10 T 11-10-2018 VSVS12_03473 e97136688c2753dd1908892d2e4e05e1 323 Pfam PF00892 EamA-like transporter family 158 300 3.2E-11 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VSVS12_03473 e97136688c2753dd1908892d2e4e05e1 323 Pfam PF00892 EamA-like transporter family 10 146 3.0E-14 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VSVS12_03473 e97136688c2753dd1908892d2e4e05e1 323 SUPERFAMILY SSF103481 45 149 7.06E-9 T 11-10-2018 VSVS12_01997 9bdaadbc09807e37b360304db0a78ba4 160 Gene3D G3DSA:3.40.630.30 2 160 6.4E-28 T 11-10-2018 VSVS12_01997 9bdaadbc09807e37b360304db0a78ba4 160 SUPERFAMILY SSF55729 1 160 5.15E-30 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_01997 9bdaadbc09807e37b360304db0a78ba4 160 Pfam PF00583 Acetyltransferase (GNAT) family 43 137 1.6E-13 T 11-10-2018 IPR000182 GNAT domain VSVS12_02636 a4d7e4791872ed1d0379a73ce130f5a1 267 Pfam PF16537 Type II secretion system protein B 202 261 2.7E-22 T 11-10-2018 IPR032389 Type II secretion system protein B VSVS12_00265 819fc48fdf425d4a04f26c150ff82351 182 SUPERFAMILY SSF51161 4 175 9.84E-44 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily VSVS12_00265 819fc48fdf425d4a04f26c150ff82351 182 Gene3D G3DSA:2.160.10.10 3 180 6.3E-55 T 11-10-2018 VSVS12_00265 819fc48fdf425d4a04f26c150ff82351 182 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 96 129 1.9E-5 T 11-10-2018 IPR001451 Hexapeptide repeat VSVS12_00265 819fc48fdf425d4a04f26c150ff82351 182 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 14 40 8.5E-5 T 11-10-2018 IPR001451 Hexapeptide repeat VSVS12_03068 55d67349c3011496cc1764eb7b295d89 477 Pfam PF03600 Citrate transporter 47 422 4.2E-51 T 11-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 VSVS12_03615 2c24cf5b97bd0976b17fb0d522032177 335 Gene3D G3DSA:3.30.930.10 13 331 1.3E-147 T 11-10-2018 VSVS12_03615 2c24cf5b97bd0976b17fb0d522032177 335 Hamap MF_00555 Aspartate--ammonia ligase [asnA]. 11 331 50.46 T 11-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 VSVS12_03615 2c24cf5b97bd0976b17fb0d522032177 335 PIRSF PIRSF001555 7 335 2.5E-159 T 11-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 VSVS12_03615 2c24cf5b97bd0976b17fb0d522032177 335 TIGRFAM TIGR00669 asnA: aspartate--ammonia ligase 22 328 1.9E-112 T 11-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 VSVS12_03615 2c24cf5b97bd0976b17fb0d522032177 335 Pfam PF03590 Aspartate-ammonia ligase 20 245 2.1E-108 T 11-10-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 VSVS12_03615 2c24cf5b97bd0976b17fb0d522032177 335 SUPERFAMILY SSF55681 15 328 5.97E-93 T 11-10-2018 VSVS12_01023 231e1be9ecad047caaa299f723a5ba83 354 Pfam PF01594 AI-2E family transporter 20 345 4.1E-73 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like VSVS12_01413 8e3d33fc16cf8eb69a5b09589b81a016 475 Gene3D G3DSA:3.20.20.70 277 469 1.7E-176 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_01413 8e3d33fc16cf8eb69a5b09589b81a016 475 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 21 275 35.056 T 11-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 VSVS12_01413 8e3d33fc16cf8eb69a5b09589b81a016 475 SUPERFAMILY SSF51366 277 473 7.38E-55 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VSVS12_01413 8e3d33fc16cf8eb69a5b09589b81a016 475 Pfam PF00218 Indole-3-glycerol phosphate synthase 23 272 4.2E-96 T 11-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 VSVS12_01413 8e3d33fc16cf8eb69a5b09589b81a016 475 Gene3D G3DSA:3.20.20.70 26 276 1.7E-176 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_01413 8e3d33fc16cf8eb69a5b09589b81a016 475 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 68 86 - T 11-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 VSVS12_01413 8e3d33fc16cf8eb69a5b09589b81a016 475 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 278 469 7.1E-56 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 VSVS12_01413 8e3d33fc16cf8eb69a5b09589b81a016 475 SUPERFAMILY SSF51366 29 274 2.35E-80 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VSVS12_01413 8e3d33fc16cf8eb69a5b09589b81a016 475 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 276 475 30.796 T 11-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 VSVS12_00108 175628c3b815f4a1a21edf3e93ca369c 672 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 670 40.617 T 11-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 VSVS12_00108 175628c3b815f4a1a21edf3e93ca369c 672 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 669 0.0 T 11-10-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 VSVS12_00108 175628c3b815f4a1a21edf3e93ca369c 672 Gene3D G3DSA:1.10.486.10 377 546 2.3E-124 T 11-10-2018 VSVS12_00108 175628c3b815f4a1a21edf3e93ca369c 672 Gene3D G3DSA:1.10.10.160 108 181 6.2E-99 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily VSVS12_00108 175628c3b815f4a1a21edf3e93ca369c 672 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 4.8E-77 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 VSVS12_00108 175628c3b815f4a1a21edf3e93ca369c 672 SUPERFAMILY SSF52540 1 640 7.6E-161 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00108 175628c3b815f4a1a21edf3e93ca369c 672 Gene3D G3DSA:3.40.50.300 274 634 2.3E-124 T 11-10-2018 VSVS12_00108 175628c3b815f4a1a21edf3e93ca369c 672 Gene3D G3DSA:3.40.50.300 4 266 6.2E-99 T 11-10-2018 VSVS12_00108 175628c3b815f4a1a21edf3e93ca369c 672 Pfam PF13361 UvrD-like helicase C-terminal domain 271 615 6.0E-74 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VSVS12_00884 4d0808fee9ef79d1ec24c92283ab236a 296 SUPERFAMILY SSF56219 66 285 3.66E-21 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VSVS12_00884 4d0808fee9ef79d1ec24c92283ab236a 296 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 72 276 8.8E-7 T 11-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase VSVS12_00884 4d0808fee9ef79d1ec24c92283ab236a 296 Hamap MF_01119 UPF0294 protein YafD [yafD]. 1 284 50.604 T 11-10-2018 IPR022958 Uncharacterised protein family UPF0294 VSVS12_00884 4d0808fee9ef79d1ec24c92283ab236a 296 Gene3D G3DSA:3.60.10.10 62 284 1.7E-16 T 11-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily VSVS12_00551 6e7a4b3d2b7dcc0d5a3c0f77bc82dd66 84 PIRSF PIRSF003113 2 83 5.1E-22 T 11-10-2018 IPR002634 BolA protein VSVS12_00551 6e7a4b3d2b7dcc0d5a3c0f77bc82dd66 84 Gene3D G3DSA:3.30.300.90 1 84 1.0E-32 T 11-10-2018 VSVS12_00551 6e7a4b3d2b7dcc0d5a3c0f77bc82dd66 84 SUPERFAMILY SSF82657 4 82 4.32E-28 T 11-10-2018 IPR036065 BolA-like superfamily VSVS12_00551 6e7a4b3d2b7dcc0d5a3c0f77bc82dd66 84 Pfam PF01722 BolA-like protein 11 74 1.4E-14 T 11-10-2018 IPR002634 BolA protein VSVS12_03040 2240e162417d95a9f061f930f1d7a7f6 177 SUPERFAMILY SSF55729 4 173 2.06E-41 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_03040 2240e162417d95a9f061f930f1d7a7f6 177 Pfam PF13302 Acetyltransferase (GNAT) domain 18 150 3.2E-19 T 11-10-2018 IPR000182 GNAT domain VSVS12_03040 2240e162417d95a9f061f930f1d7a7f6 177 Gene3D G3DSA:3.40.630.30 2 173 7.4E-44 T 11-10-2018 VSVS12_03465 fc9e7df2977e561b88625c5bdf0813a6 331 SUPERFAMILY SSF82185 74 196 4.84E-17 T 11-10-2018 VSVS12_03465 fc9e7df2977e561b88625c5bdf0813a6 331 Gene3D G3DSA:2.20.110.10 52 127 8.7E-6 T 11-10-2018 VSVS12_03465 fc9e7df2977e561b88625c5bdf0813a6 331 Gene3D G3DSA:3.90.930.1 169 307 1.3E-18 T 11-10-2018 VSVS12_03465 fc9e7df2977e561b88625c5bdf0813a6 331 Pfam PF07661 MORN repeat variant 278 298 0.035 T 11-10-2018 IPR011652 MORN variant VSVS12_03465 fc9e7df2977e561b88625c5bdf0813a6 331 Pfam PF07661 MORN repeat variant 230 251 0.0013 T 11-10-2018 IPR011652 MORN variant VSVS12_03465 fc9e7df2977e561b88625c5bdf0813a6 331 Pfam PF07661 MORN repeat variant 254 274 0.41 T 11-10-2018 IPR011652 MORN variant VSVS12_03465 fc9e7df2977e561b88625c5bdf0813a6 331 SUPERFAMILY SSF82185 200 323 6.02E-22 T 11-10-2018 VSVS12_03442 71a05a3720079e9c2497ec92875bb84a 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 227 6.2E-18 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VSVS12_03442 71a05a3720079e9c2497ec92875bb84a 235 Gene3D G3DSA:3.40.50.2300 1 121 2.9E-40 T 11-10-2018 VSVS12_03442 71a05a3720079e9c2497ec92875bb84a 235 SUPERFAMILY SSF46894 132 229 3.97E-19 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VSVS12_03442 71a05a3720079e9c2497ec92875bb84a 235 Gene3D G3DSA:1.10.10.10 122 231 5.1E-24 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_03442 71a05a3720079e9c2497ec92875bb84a 235 SMART SM00862 152 227 3.7E-17 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VSVS12_03442 71a05a3720079e9c2497ec92875bb84a 235 Pfam PF00072 Response regulator receiver domain 6 115 3.4E-32 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_03442 71a05a3720079e9c2497ec92875bb84a 235 SMART SM00448 4 114 9.4E-47 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_03442 71a05a3720079e9c2497ec92875bb84a 235 SUPERFAMILY SSF52172 2 131 2.42E-44 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_00543 4ac14b7d0aaff1afcee88ba5073e62bc 185 Gene3D G3DSA:3.40.50.1000 1 177 1.1E-59 T 11-10-2018 IPR023214 HAD superfamily VSVS12_00543 4ac14b7d0aaff1afcee88ba5073e62bc 185 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 23 174 1.4E-61 T 11-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VSVS12_00543 4ac14b7d0aaff1afcee88ba5073e62bc 185 PIRSF PIRSF006118 10 185 7.8E-75 T 11-10-2018 IPR010023 KdsC family GO:0016788 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VSVS12_00543 4ac14b7d0aaff1afcee88ba5073e62bc 185 Pfam PF08282 haloacid dehalogenase-like hydrolase 92 158 1.7E-9 T 11-10-2018 VSVS12_00543 4ac14b7d0aaff1afcee88ba5073e62bc 185 SUPERFAMILY SSF56784 21 178 2.27E-41 T 11-10-2018 IPR036412 HAD-like superfamily VSVS12_00543 4ac14b7d0aaff1afcee88ba5073e62bc 185 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 24 137 4.3E-13 T 11-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 VSVS12_04021 57c456e616af6c6f5426ca44aca40957 443 Gene3D G3DSA:1.10.443.10 246 423 2.7E-16 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VSVS12_04021 57c456e616af6c6f5426ca44aca40957 443 SUPERFAMILY SSF56349 152 416 1.82E-44 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VSVS12_04021 57c456e616af6c6f5426ca44aca40957 443 Gene3D G3DSA:3.30.160.390 6 93 4.1E-26 T 11-10-2018 IPR038488 Integrase, DNA-binding domain superfamily VSVS12_04021 57c456e616af6c6f5426ca44aca40957 443 Pfam PF13356 Arm DNA-binding domain 7 91 8.9E-17 T 11-10-2018 IPR025166 Integrase, DNA-binding domain VSVS12_04021 57c456e616af6c6f5426ca44aca40957 443 Pfam PF00589 Phage integrase family 248 408 5.7E-20 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VSVS12_00494 bf2d2f31b8a7ddc0abfc35ede771f95d 129 Pfam PF00411 Ribosomal protein S11 19 128 5.5E-52 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VSVS12_00494 bf2d2f31b8a7ddc0abfc35ede771f95d 129 SUPERFAMILY SSF53137 14 129 8.5E-48 T 11-10-2018 VSVS12_00494 bf2d2f31b8a7ddc0abfc35ede771f95d 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 1.5E-54 T 11-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00494 bf2d2f31b8a7ddc0abfc35ede771f95d 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 3 129 32.591 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VSVS12_00494 bf2d2f31b8a7ddc0abfc35ede771f95d 129 PIRSF PIRSF002131 1 129 3.9E-52 T 11-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 VSVS12_00494 bf2d2f31b8a7ddc0abfc35ede771f95d 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 11-10-2018 IPR018102 Ribosomal S11, conserved site VSVS12_00494 bf2d2f31b8a7ddc0abfc35ede771f95d 129 Gene3D G3DSA:3.30.420.80 1 129 7.8E-57 T 11-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 VSVS12_02195 78385e002ede196dc91836abcd1c9f77 104 Gene3D G3DSA:1.10.1900.30 30 98 8.4E-35 T 11-10-2018 IPR038191 YciN superfamily VSVS12_02195 78385e002ede196dc91836abcd1c9f77 104 Pfam PF10692 Protein of unknown function (DUF2498) 25 102 1.5E-40 T 11-10-2018 IPR019633 Protein of unknown function DUF2498 VSVS12_03299 4a62d967730fde4a7386dc0b1cb72a18 113 Gene3D G3DSA:3.40.50.1970 1 113 2.7E-30 T 11-10-2018 VSVS12_03299 4a62d967730fde4a7386dc0b1cb72a18 113 SUPERFAMILY SSF56796 1 111 8.9E-32 T 11-10-2018 VSVS12_03299 4a62d967730fde4a7386dc0b1cb72a18 113 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 112 6.5E-29 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VSVS12_01474 ea7ab3befe96ef28ff9ac81bc2e70824 138 SUPERFAMILY SSF54637 3 137 5.25E-38 T 11-10-2018 IPR029069 HotDog domain superfamily VSVS12_01474 ea7ab3befe96ef28ff9ac81bc2e70824 138 Gene3D G3DSA:3.10.129.10 1 138 5.3E-41 T 11-10-2018 VSVS12_01474 ea7ab3befe96ef28ff9ac81bc2e70824 138 Pfam PF01575 MaoC like domain 16 117 3.5E-23 T 11-10-2018 IPR002539 MaoC-like dehydratase domain VSVS12_01425 4b7e88919cfdd8b3d5b4a7dc68722236 167 Hamap MF_00163 Peptide deformylase [def]. 2 162 28.817 T 11-10-2018 IPR023635 Peptide deformylase VSVS12_01425 4b7e88919cfdd8b3d5b4a7dc68722236 167 Pfam PF01327 Polypeptide deformylase 4 152 1.0E-45 T 11-10-2018 IPR023635 Peptide deformylase VSVS12_01425 4b7e88919cfdd8b3d5b4a7dc68722236 167 SUPERFAMILY SSF56420 2 164 2.88E-55 T 11-10-2018 IPR036821 Peptide deformylase superfamily VSVS12_01425 4b7e88919cfdd8b3d5b4a7dc68722236 167 PRINTS PR01576 Peptide deformylase signature 101 119 1.1E-28 T 11-10-2018 IPR023635 Peptide deformylase VSVS12_01425 4b7e88919cfdd8b3d5b4a7dc68722236 167 PRINTS PR01576 Peptide deformylase signature 33 62 1.1E-28 T 11-10-2018 IPR023635 Peptide deformylase VSVS12_01425 4b7e88919cfdd8b3d5b4a7dc68722236 167 PRINTS PR01576 Peptide deformylase signature 89 100 1.1E-28 T 11-10-2018 IPR023635 Peptide deformylase VSVS12_01425 4b7e88919cfdd8b3d5b4a7dc68722236 167 PRINTS PR01576 Peptide deformylase signature 120 149 1.1E-28 T 11-10-2018 IPR023635 Peptide deformylase VSVS12_01425 4b7e88919cfdd8b3d5b4a7dc68722236 167 PIRSF PIRSF004749 1 167 8.3E-50 T 11-10-2018 IPR023635 Peptide deformylase VSVS12_01425 4b7e88919cfdd8b3d5b4a7dc68722236 167 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 7.4E-49 T 11-10-2018 IPR023635 Peptide deformylase VSVS12_01425 4b7e88919cfdd8b3d5b4a7dc68722236 167 Gene3D G3DSA:3.90.45.10 1 167 2.1E-61 T 11-10-2018 IPR036821 Peptide deformylase superfamily VSVS12_00126 e50a0016c3a649e52439b03dc308e2cd 80 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 1.3E-22 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 VSVS12_00126 e50a0016c3a649e52439b03dc308e2cd 80 Pfam PF02416 mttA/Hcf106 family 4 55 6.6E-15 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 VSVS12_00126 e50a0016c3a649e52439b03dc308e2cd 80 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 75 25.445 T 11-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 VSVS12_03172 273b8285dce23b1e96747e8aff8483e4 128 Gene3D G3DSA:3.40.50.2300 3 123 3.0E-17 T 11-10-2018 VSVS12_04099 97383a6227e43a862a05472108b58d2b 479 Pfam PF00367 phosphotransferase system, EIIB 8 41 1.2E-13 T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VSVS12_04099 97383a6227e43a862a05472108b58d2b 479 SUPERFAMILY SSF55604 6 81 1.83E-20 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VSVS12_04099 97383a6227e43a862a05472108b58d2b 479 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 29 110 7.8E-19 T 11-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VSVS12_04099 97383a6227e43a862a05472108b58d2b 479 TIGRFAM TIGR01996 PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component 2 464 2.1E-194 T 11-10-2018 IPR010973 Phosphotransferase system, sucrose-specific IIBC component GO:0008982|GO:0009401|GO:0016021 VSVS12_04099 97383a6227e43a862a05472108b58d2b 479 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 164 453 8.8E-91 T 11-10-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 VSVS12_04099 97383a6227e43a862a05472108b58d2b 479 Gene3D G3DSA:3.30.1360.60 1 78 1.6E-25 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VSVS12_04099 97383a6227e43a862a05472108b58d2b 479 Pfam PF02378 Phosphotransferase system, EIIC 110 409 3.3E-48 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VSVS12_04099 97383a6227e43a862a05472108b58d2b 479 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VSVS12_04142 9274a41d7adf423ef41cad2b91fcd0bb 246 Pfam PF01925 Sulfite exporter TauE/SafE 6 237 2.7E-34 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VSVS12_03314 e458db39dd16f18f50e584c6cb905d60 142 Gene3D G3DSA:3.10.180.10 2 142 3.1E-49 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VSVS12_03314 e458db39dd16f18f50e584c6cb905d60 142 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 125 4.3E-11 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VSVS12_03314 e458db39dd16f18f50e584c6cb905d60 142 SUPERFAMILY SSF54593 4 129 6.74E-28 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VSVS12_03353 cbcb8685d05a9a806ad461bfcf682cbb 205 Pfam PF09335 SNARE associated Golgi protein 37 156 1.6E-23 T 11-10-2018 IPR032816 SNARE associated Golgi protein VSVS12_03312 7a389b5f1359008741279e9945a26a59 190 TIGRFAM TIGR02959 SigZ: RNA polymerase sigma factor, SigZ family 14 184 8.4E-59 T 11-10-2018 IPR014304 RNA polymerase sigma-Z type VSVS12_03312 7a389b5f1359008741279e9945a26a59 190 Gene3D G3DSA:1.10.1740.10 3 103 5.4E-16 T 11-10-2018 VSVS12_03312 7a389b5f1359008741279e9945a26a59 190 Gene3D G3DSA:1.10.10.10 104 167 1.6E-8 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_03312 7a389b5f1359008741279e9945a26a59 190 Pfam PF08281 Sigma-70, region 4 113 159 9.7E-7 T 11-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 VSVS12_03312 7a389b5f1359008741279e9945a26a59 190 Pfam PF04542 Sigma-70 region 2 14 81 1.6E-12 T 11-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 VSVS12_03312 7a389b5f1359008741279e9945a26a59 190 SUPERFAMILY SSF88659 112 165 5.79E-9 T 11-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like VSVS12_03312 7a389b5f1359008741279e9945a26a59 190 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 161 3.6E-21 T 11-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 VSVS12_03312 7a389b5f1359008741279e9945a26a59 190 SUPERFAMILY SSF88946 8 95 5.49E-18 T 11-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 VSVS12_03959 13a4e9223ae6304b22f343e924273e9a 331 Gene3D G3DSA:3.40.630.10 14 329 8.5E-71 T 11-10-2018 VSVS12_03959 13a4e9223ae6304b22f343e924273e9a 331 SUPERFAMILY SSF53187 39 330 1.62E-50 T 11-10-2018 VSVS12_03959 13a4e9223ae6304b22f343e924273e9a 331 PIRSF PIRSF039012 6 331 4.6E-91 T 11-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 VSVS12_03959 13a4e9223ae6304b22f343e924273e9a 331 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 56 328 3.0E-67 T 11-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 VSVS12_02075 76d8304b84f6f500399fc340f94ef7fd 413 PIRSF PIRSF003085 17 413 6.3E-119 T 11-10-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 VSVS12_02075 76d8304b84f6f500399fc340f94ef7fd 413 SUPERFAMILY SSF53335 22 366 4.98E-89 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_02075 76d8304b84f6f500399fc340f94ef7fd 413 Gene3D G3DSA:3.40.50.150 144 413 2.7E-98 T 11-10-2018 VSVS12_02075 76d8304b84f6f500399fc340f94ef7fd 413 Pfam PF02353 Mycolic acid cyclopropane synthetase 139 407 1.3E-78 T 11-10-2018 VSVS12_03507 0b583edf0884d8598932e4f7cc1f56c1 308 SUPERFAMILY SSF53613 1 303 3.74E-76 T 11-10-2018 IPR029056 Ribokinase-like VSVS12_03507 0b583edf0884d8598932e4f7cc1f56c1 308 Gene3D G3DSA:3.40.1190.20 1 307 5.5E-94 T 11-10-2018 IPR029056 Ribokinase-like VSVS12_03507 0b583edf0884d8598932e4f7cc1f56c1 308 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 4 300 2.6E-110 T 11-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 VSVS12_03507 0b583edf0884d8598932e4f7cc1f56c1 308 PRINTS PR00990 Ribokinase signature 219 230 3.3E-30 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VSVS12_03507 0b583edf0884d8598932e4f7cc1f56c1 308 PRINTS PR00990 Ribokinase signature 106 119 3.3E-30 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VSVS12_03507 0b583edf0884d8598932e4f7cc1f56c1 308 PRINTS PR00990 Ribokinase signature 175 190 3.3E-30 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VSVS12_03507 0b583edf0884d8598932e4f7cc1f56c1 308 PRINTS PR00990 Ribokinase signature 33 52 3.3E-30 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VSVS12_03507 0b583edf0884d8598932e4f7cc1f56c1 308 PRINTS PR00990 Ribokinase signature 6 27 3.3E-30 T 11-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 VSVS12_03507 0b583edf0884d8598932e4f7cc1f56c1 308 Hamap MF_01987 Ribokinase [rbsK]. 2 303 25.863 T 11-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 VSVS12_03507 0b583edf0884d8598932e4f7cc1f56c1 308 Pfam PF00294 pfkB family carbohydrate kinase 1 296 1.8E-66 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB VSVS12_04443 7ff29c9b6110232b95a9d7289b30ee96 904 TIGRFAM TIGR03744 traC_PFL_4706: conjugative transfer ATPase, PFL_4706 family 25 897 5.0E-264 T 11-10-2018 IPR022303 Conjugative transfer ATPase VSVS12_04443 7ff29c9b6110232b95a9d7289b30ee96 904 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 30 277 1.0E-34 T 11-10-2018 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase VSVS12_04443 7ff29c9b6110232b95a9d7289b30ee96 904 SUPERFAMILY SSF52540 419 815 1.95E-30 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00214 e272612dff73e14ddc8c4068cf79faa8 312 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 293 4.1E-148 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VSVS12_00214 e272612dff73e14ddc8c4068cf79faa8 312 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 3.0E-70 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VSVS12_00214 e272612dff73e14ddc8c4068cf79faa8 312 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 3.0E-70 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VSVS12_00214 e272612dff73e14ddc8c4068cf79faa8 312 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 3.0E-70 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VSVS12_00214 e272612dff73e14ddc8c4068cf79faa8 312 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 3.0E-70 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VSVS12_00214 e272612dff73e14ddc8c4068cf79faa8 312 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 254 270 3.0E-70 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VSVS12_00214 e272612dff73e14ddc8c4068cf79faa8 312 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 3.0E-70 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VSVS12_00214 e272612dff73e14ddc8c4068cf79faa8 312 Gene3D G3DSA:1.20.58.180 216 298 1.9E-33 T 11-10-2018 VSVS12_00214 e272612dff73e14ddc8c4068cf79faa8 312 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 294 61.437 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VSVS12_00214 e272612dff73e14ddc8c4068cf79faa8 312 SUPERFAMILY SSF55681 8 293 1.59E-132 T 11-10-2018 VSVS12_00214 e272612dff73e14ddc8c4068cf79faa8 312 Gene3D G3DSA:3.30.930.10 1 215 1.4E-109 T 11-10-2018 VSVS12_00214 e272612dff73e14ddc8c4068cf79faa8 312 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 301 3.5E-168 T 11-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 VSVS12_03976 e080924a425ae24aad771d3e916a6f6f 129 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 4.1E-7 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VSVS12_03976 e080924a425ae24aad771d3e916a6f6f 129 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 4.1E-7 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VSVS12_03976 e080924a425ae24aad771d3e916a6f6f 129 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 4.1E-7 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VSVS12_03976 e080924a425ae24aad771d3e916a6f6f 129 Pfam PF13411 MerR HTH family regulatory protein 1 67 4.3E-16 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VSVS12_03976 e080924a425ae24aad771d3e916a6f6f 129 SUPERFAMILY SSF46955 1 126 1.54E-32 T 11-10-2018 IPR009061 Putative DNA-binding domain superfamily VSVS12_03976 e080924a425ae24aad771d3e916a6f6f 129 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VSVS12_03976 e080924a425ae24aad771d3e916a6f6f 129 Gene3D G3DSA:1.10.1660.10 1 125 2.1E-31 T 11-10-2018 VSVS12_03976 e080924a425ae24aad771d3e916a6f6f 129 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 127 2.1E-55 T 11-10-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 VSVS12_03976 e080924a425ae24aad771d3e916a6f6f 129 SMART SM00422 1 70 9.0E-23 T 11-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 VSVS12_01169 2e58e12119d73c06c6f33b2e7b6455a4 489 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 8 458 3.3E-149 T 11-10-2018 IPR003846 Uncharacterised protein family UPF0061 VSVS12_01169 2e58e12119d73c06c6f33b2e7b6455a4 489 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 4 475 43.426 T 11-10-2018 IPR003846 Uncharacterised protein family UPF0061 VSVS12_00848 325f68d771e9776c813fd89351c46aea 415 Gene3D G3DSA:3.40.50.1820 18 415 3.2E-110 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold VSVS12_00848 325f68d771e9776c813fd89351c46aea 415 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 6 414 2.8E-222 T 11-10-2018 IPR010520 UPF0255 family VSVS12_00848 325f68d771e9776c813fd89351c46aea 415 Hamap MF_01063 Esterase FrsA [frsA]. 4 415 54.854 T 11-10-2018 IPR010520 UPF0255 family VSVS12_00848 325f68d771e9776c813fd89351c46aea 415 SUPERFAMILY SSF53474 47 410 2.98E-41 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold VSVS12_02831 1e6574ca333e90e952613280da27dffb 130 Pfam PF16245 Domain of unknown function (DUF4902) 15 122 4.1E-10 T 11-10-2018 IPR032598 Protein of unknown function DUF4902 VSVS12_02831 1e6574ca333e90e952613280da27dffb 130 Gene3D G3DSA:3.10.450.610 2 130 4.9E-16 T 11-10-2018 VSVS12_01473 8ae428cf488f6f15b31e94f316ec85b8 400 Gene3D G3DSA:3.40.50.720 1 398 1.1E-167 T 11-10-2018 VSVS12_01473 8ae428cf488f6f15b31e94f316ec85b8 400 Hamap MF_01838 Trans-2-enoyl-CoA reductase [NADH] [fabV]. 1 396 53.527 T 11-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VSVS12_01473 8ae428cf488f6f15b31e94f316ec85b8 400 Pfam PF07055 Enoyl reductase FAD binding domain 327 390 9.5E-24 T 11-10-2018 IPR024906 Enoyl reductase FAD binding domain KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VSVS12_01473 8ae428cf488f6f15b31e94f316ec85b8 400 Pfam PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase 2 80 4.8E-34 T 11-10-2018 IPR010758 Trans-2-enoyl-CoA reductase GO:0016491|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VSVS12_01473 8ae428cf488f6f15b31e94f316ec85b8 400 Pfam PF12241 Trans-2-enoyl-CoA reductase catalytic region 84 319 3.2E-104 T 11-10-2018 IPR024910 Trans-2-enoyl-CoA reductase catalytic domain, putative KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 VSVS12_01473 8ae428cf488f6f15b31e94f316ec85b8 400 SUPERFAMILY SSF51735 42 267 1.57E-6 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_00954 86be0d24a08cd1ffda3a9c68e9bcde3b 214 PRINTS PR00094 Adenylate kinase signature 4 17 2.1E-35 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VSVS12_00954 86be0d24a08cd1ffda3a9c68e9bcde3b 214 PRINTS PR00094 Adenylate kinase signature 32 46 2.1E-35 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VSVS12_00954 86be0d24a08cd1ffda3a9c68e9bcde3b 214 PRINTS PR00094 Adenylate kinase signature 156 171 2.1E-35 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VSVS12_00954 86be0d24a08cd1ffda3a9c68e9bcde3b 214 PRINTS PR00094 Adenylate kinase signature 173 187 2.1E-35 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VSVS12_00954 86be0d24a08cd1ffda3a9c68e9bcde3b 214 PRINTS PR00094 Adenylate kinase signature 81 97 2.1E-35 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VSVS12_00954 86be0d24a08cd1ffda3a9c68e9bcde3b 214 Gene3D G3DSA:3.40.50.300 1 214 4.3E-77 T 11-10-2018 VSVS12_00954 86be0d24a08cd1ffda3a9c68e9bcde3b 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 11-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VSVS12_00954 86be0d24a08cd1ffda3a9c68e9bcde3b 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 5.3E-74 T 11-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 VSVS12_00954 86be0d24a08cd1ffda3a9c68e9bcde3b 214 SUPERFAMILY SSF52540 1 193 9.24E-45 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00954 86be0d24a08cd1ffda3a9c68e9bcde3b 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 1.1E-14 T 11-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 VSVS12_00954 86be0d24a08cd1ffda3a9c68e9bcde3b 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 52.318 T 11-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 VSVS12_00954 86be0d24a08cd1ffda3a9c68e9bcde3b 214 Pfam PF00406 Adenylate kinase 5 185 1.2E-58 T 11-10-2018 VSVS12_02643 4768d560726f805cdd779c5105be5869 442 SUPERFAMILY SSF50249 18 74 1.31E-11 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_02643 4768d560726f805cdd779c5105be5869 442 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 19 439 65.529 T 11-10-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 VSVS12_02643 4768d560726f805cdd779c5105be5869 442 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 370 400 - T 11-10-2018 IPR030390 RNA methyltransferase TrmA, active site VSVS12_02643 4768d560726f805cdd779c5105be5869 442 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 99 435 1.2E-33 T 11-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 VSVS12_02643 4768d560726f805cdd779c5105be5869 442 Pfam PF01938 TRAM domain 18 67 2.2E-6 T 11-10-2018 IPR002792 TRAM domain VSVS12_02643 4768d560726f805cdd779c5105be5869 442 Gene3D G3DSA:3.40.1350.30 135 271 1.4E-120 T 11-10-2018 VSVS12_02643 4768d560726f805cdd779c5105be5869 442 Gene3D G3DSA:3.40.50.150 89 433 1.4E-120 T 11-10-2018 VSVS12_02643 4768d560726f805cdd779c5105be5869 442 SUPERFAMILY SSF53335 77 436 3.61E-85 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_02643 4768d560726f805cdd779c5105be5869 442 Gene3D G3DSA:2.40.50.140 1 88 6.5E-28 T 11-10-2018 VSVS12_02643 4768d560726f805cdd779c5105be5869 442 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 25 431 1.5E-130 T 11-10-2018 VSVS12_02643 4768d560726f805cdd779c5105be5869 442 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 421 431 - T 11-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site VSVS12_02528 1d62bf29d8cde014eea090d8e1c90153 780 SUPERFAMILY SSF141371 465 555 3.92E-9 T 11-10-2018 VSVS12_02528 1d62bf29d8cde014eea090d8e1c90153 780 Gene3D G3DSA:2.40.10.220 465 588 1.1E-7 T 11-10-2018 VSVS12_02528 1d62bf29d8cde014eea090d8e1c90153 780 Pfam PF07238 PilZ domain 469 554 1.5E-10 T 11-10-2018 IPR009875 PilZ domain GO:0035438 VSVS12_02528 1d62bf29d8cde014eea090d8e1c90153 780 Pfam PF07238 PilZ domain 144 235 1.0E-7 T 11-10-2018 IPR009875 PilZ domain GO:0035438 VSVS12_02463 20617d4491471ca5d845ff3f4086d1b4 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 6.0E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_02463 20617d4491471ca5d845ff3f4086d1b4 299 SUPERFAMILY SSF46785 5 113 2.73E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_02463 20617d4491471ca5d845ff3f4086d1b4 299 Gene3D G3DSA:3.40.190.290 94 296 2.4E-34 T 11-10-2018 VSVS12_02463 20617d4491471ca5d845ff3f4086d1b4 299 Pfam PF03466 LysR substrate binding domain 91 293 4.2E-46 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_02463 20617d4491471ca5d845ff3f4086d1b4 299 Gene3D G3DSA:1.10.10.10 4 93 1.8E-19 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_02463 20617d4491471ca5d845ff3f4086d1b4 299 SUPERFAMILY SSF53850 92 294 3.15E-39 T 11-10-2018 VSVS12_02463 20617d4491471ca5d845ff3f4086d1b4 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 9.9E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_02463 20617d4491471ca5d845ff3f4086d1b4 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 9.9E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_02463 20617d4491471ca5d845ff3f4086d1b4 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 9.9E-6 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_01684 989b39c95a2ed4844e4cfafe008b1f4d 57 Pfam PF05545 Cbb3-type cytochrome oxidase component FixQ 6 45 1.1E-11 T 11-10-2018 IPR008621 Cbb3-type cytochrome oxidase component VSVS12_01572 d85d0355d119897e0431217214aca8ae 227 PIRSF PIRSF028111 1 227 8.6E-81 T 11-10-2018 IPR016868 Bacteriophage B3, Orf5 VSVS12_01572 d85d0355d119897e0431217214aca8ae 227 Pfam PF10979 Protein of unknown function (DUF2786) 5 42 2.7E-12 T 11-10-2018 IPR024498 Domain of unknown function DUF2786 VSVS12_03587 852440b472e6c84fde68e5322baefaac 282 Pfam PF01226 Formate/nitrite transporter 8 257 6.5E-62 T 11-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 VSVS12_03587 852440b472e6c84fde68e5322baefaac 282 Gene3D G3DSA:1.20.1080.10 1 250 3.2E-66 T 11-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 VSVS12_02124 8d9a6bdcf2918cbe74856c7171da1a42 824 Gene3D G3DSA:2.40.170.20 208 823 5.7E-18 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VSVS12_02124 8d9a6bdcf2918cbe74856c7171da1a42 824 SUPERFAMILY SSF56935 33 824 2.11E-53 T 11-10-2018 VSVS12_02124 8d9a6bdcf2918cbe74856c7171da1a42 824 Pfam PF07715 TonB-dependent Receptor Plug Domain 37 160 1.7E-12 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain VSVS12_02124 8d9a6bdcf2918cbe74856c7171da1a42 824 Gene3D G3DSA:2.170.130.10 20 165 2.3E-7 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VSVS12_01793 56db1c5ac401c6a277792c5288160472 346 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 175 335 1.9E-44 T 11-10-2018 IPR000160 GGDEF domain VSVS12_01793 56db1c5ac401c6a277792c5288160472 346 Pfam PF00990 Diguanylate cyclase, GGDEF domain 179 332 6.7E-38 T 11-10-2018 IPR000160 GGDEF domain VSVS12_01793 56db1c5ac401c6a277792c5288160472 346 Gene3D G3DSA:3.30.70.270 177 345 3.1E-50 T 11-10-2018 VSVS12_01793 56db1c5ac401c6a277792c5288160472 346 SUPERFAMILY SSF55073 184 338 1.41E-42 T 11-10-2018 IPR029787 Nucleotide cyclase VSVS12_01793 56db1c5ac401c6a277792c5288160472 346 SMART SM00267 168 336 8.5E-50 T 11-10-2018 IPR000160 GGDEF domain VSVS12_00779 418f46a6791d1b6ebf968e578f58acd1 177 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 8 173 1.8E-44 T 11-10-2018 IPR002786 Non-canonical purine NTP phosphatase VSVS12_00779 418f46a6791d1b6ebf968e578f58acd1 177 Gene3D G3DSA:3.90.950.10 1 176 4.1E-69 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VSVS12_00779 418f46a6791d1b6ebf968e578f58acd1 177 Pfam PF01931 Protein of unknown function DUF84 9 167 4.3E-57 T 11-10-2018 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 VSVS12_00779 418f46a6791d1b6ebf968e578f58acd1 177 Hamap MF_00648 Non-canonical purine NTP phosphatase. 4 173 29.727 T 11-10-2018 IPR002786 Non-canonical purine NTP phosphatase VSVS12_00779 418f46a6791d1b6ebf968e578f58acd1 177 SUPERFAMILY SSF52972 4 173 8.28E-60 T 11-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like VSVS12_00844 86fdefe92ff055ecdcf2262617e0b2ec 147 Gene3D G3DSA:2.40.70.10 4 134 2.6E-34 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily VSVS12_00844 86fdefe92ff055ecdcf2262617e0b2ec 147 Pfam PF05618 Putative ATP-dependant zinc protease 8 142 1.2E-45 T 11-10-2018 VSVS12_00844 86fdefe92ff055ecdcf2262617e0b2ec 147 SUPERFAMILY SSF50630 7 141 5.22E-43 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily VSVS12_01930 e9686ca0a33004137f6d728857920d9d 395 Pfam PF00557 Metallopeptidase family M24 169 378 2.8E-31 T 11-10-2018 IPR000994 Peptidase M24 VSVS12_01930 e9686ca0a33004137f6d728857920d9d 395 Gene3D G3DSA:3.40.350.10 3 159 7.5E-35 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VSVS12_01930 e9686ca0a33004137f6d728857920d9d 395 SUPERFAMILY SSF55920 161 393 5.1E-53 T 11-10-2018 IPR036005 Creatinase/aminopeptidase-like VSVS12_01930 e9686ca0a33004137f6d728857920d9d 395 Gene3D G3DSA:3.90.230.10 160 393 1.2E-41 T 11-10-2018 VSVS12_01930 e9686ca0a33004137f6d728857920d9d 395 SUPERFAMILY SSF53092 1 159 1.24E-39 T 11-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal VSVS12_01930 e9686ca0a33004137f6d728857920d9d 395 Pfam PF01321 Creatinase/Prolidase N-terminal domain 16 161 1.4E-19 T 11-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 VSVS12_02267 a396eada839b85608a0093b4fdf977ac 292 Gene3D G3DSA:3.40.50.1980 180 292 5.8E-40 T 11-10-2018 VSVS12_02267 a396eada839b85608a0093b4fdf977ac 292 Gene3D G3DSA:3.40.50.1980 22 179 1.5E-46 T 11-10-2018 VSVS12_02267 a396eada839b85608a0093b4fdf977ac 292 Pfam PF01297 Zinc-uptake complex component A periplasmic 23 287 6.1E-59 T 11-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 VSVS12_02267 a396eada839b85608a0093b4fdf977ac 292 SUPERFAMILY SSF53807 17 290 2.6E-75 T 11-10-2018 VSVS12_02267 a396eada839b85608a0093b4fdf977ac 292 PRINTS PR00690 Adhesin family signature 232 250 1.3E-8 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 VSVS12_02267 a396eada839b85608a0093b4fdf977ac 292 PRINTS PR00690 Adhesin family signature 179 200 1.3E-8 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 VSVS12_02267 a396eada839b85608a0093b4fdf977ac 292 PRINTS PR00690 Adhesin family signature 64 81 1.3E-8 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 VSVS12_02267 a396eada839b85608a0093b4fdf977ac 292 PRINTS PR00690 Adhesin family signature 51 64 1.3E-8 T 11-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 VSVS12_01719 cdaecc4d467ef891854e41d2ef0df94f 955 Pfam PF10462 Peptidase M66 365 663 2.7E-79 T 11-10-2018 IPR019503 Peptidase M66 domain GO:0004222 VSVS12_01719 cdaecc4d467ef891854e41d2ef0df94f 955 Gene3D G3DSA:2.60.120.1230 252 364 2.7E-28 T 11-10-2018 VSVS12_01719 cdaecc4d467ef891854e41d2ef0df94f 955 Gene3D G3DSA:2.60.120.1230 673 790 1.5E-22 T 11-10-2018 VSVS12_03261 88b2d1431e67a0f55b39dbe2484c9365 106 Pfam PF07007 Lysozyme inhibitor LprI 12 98 2.1E-16 T 11-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal VSVS12_03261 88b2d1431e67a0f55b39dbe2484c9365 106 Gene3D G3DSA:1.20.1270.180 8 105 1.1E-21 T 11-10-2018 VSVS12_03387 62a9df081be30b4eeb739369b63a91bf 358 Pfam PF13343 Bacterial extracellular solute-binding protein 95 307 1.1E-34 T 11-10-2018 VSVS12_03387 62a9df081be30b4eeb739369b63a91bf 358 Gene3D G3DSA:3.40.190.10 144 264 3.0E-34 T 11-10-2018 VSVS12_03387 62a9df081be30b4eeb739369b63a91bf 358 Gene3D G3DSA:3.40.190.10 69 319 3.0E-34 T 11-10-2018 VSVS12_03387 62a9df081be30b4eeb739369b63a91bf 358 SUPERFAMILY SSF53850 52 351 3.21E-46 T 11-10-2018 VSVS12_02002 f7ec3e24f79bbe3e0ade301fb6ad92e0 262 SUPERFAMILY SSF46689 29 87 2.05E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_02002 f7ec3e24f79bbe3e0ade301fb6ad92e0 262 Gene3D G3DSA:1.10.357.10 28 213 2.8E-15 T 11-10-2018 VSVS12_02002 f7ec3e24f79bbe3e0ade301fb6ad92e0 262 Pfam PF00440 Bacterial regulatory proteins, tetR family 39 81 2.2E-8 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VSVS12_02363 186dbcb7cda8c5e8259abe7acd282a71 388 PIRSF PIRSF001554 1 388 1.1E-153 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VSVS12_02363 186dbcb7cda8c5e8259abe7acd282a71 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 281 - T 11-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VSVS12_02363 186dbcb7cda8c5e8259abe7acd282a71 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 1.6E-170 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VSVS12_02363 186dbcb7cda8c5e8259abe7acd282a71 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 42.742 T 11-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VSVS12_02363 186dbcb7cda8c5e8259abe7acd282a71 388 Pfam PF08442 ATP-grasp domain 2 203 7.1E-79 T 11-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 VSVS12_02363 186dbcb7cda8c5e8259abe7acd282a71 388 Gene3D G3DSA:3.30.1490.20 21 104 8.5E-92 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VSVS12_02363 186dbcb7cda8c5e8259abe7acd282a71 388 SUPERFAMILY SSF52210 239 385 1.05E-52 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VSVS12_02363 186dbcb7cda8c5e8259abe7acd282a71 388 Pfam PF00549 CoA-ligase 262 382 1.5E-24 T 11-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VSVS12_02363 186dbcb7cda8c5e8259abe7acd282a71 388 Gene3D G3DSA:3.40.50.261 240 388 4.8E-56 T 11-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 VSVS12_02363 186dbcb7cda8c5e8259abe7acd282a71 388 Gene3D G3DSA:3.30.470.20 1 234 8.5E-92 T 11-10-2018 VSVS12_02363 186dbcb7cda8c5e8259abe7acd282a71 388 SUPERFAMILY SSF56059 1 238 1.36E-78 T 11-10-2018 VSVS12_01025 c5ec18b969b7ba52fa91f54ee5ada86b 45 SUPERFAMILY SSF52833 5 43 4.03E-5 T 11-10-2018 IPR036249 Thioredoxin-like superfamily VSVS12_03802 1a76fd325541aec72f3dcf680b701f2e 373 Gene3D G3DSA:1.10.287.470 93 166 1.2E-72 T 11-10-2018 VSVS12_03802 1a76fd325541aec72f3dcf680b701f2e 373 Gene3D G3DSA:2.40.420.20 278 368 7.8E-21 T 11-10-2018 VSVS12_03802 1a76fd325541aec72f3dcf680b701f2e 373 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 51 284 6.6E-13 T 11-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain VSVS12_03802 1a76fd325541aec72f3dcf680b701f2e 373 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 34 367 2.6E-80 T 11-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 VSVS12_03802 1a76fd325541aec72f3dcf680b701f2e 373 Gene3D G3DSA:2.40.30.170 52 277 1.2E-72 T 11-10-2018 VSVS12_03802 1a76fd325541aec72f3dcf680b701f2e 373 Gene3D G3DSA:2.40.50.100 58 201 1.2E-72 T 11-10-2018 VSVS12_03802 1a76fd325541aec72f3dcf680b701f2e 373 SUPERFAMILY SSF111369 49 291 8.37E-61 T 11-10-2018 VSVS12_03855 d05b1d5de9116f80ff18f9701ed5156f 384 Gene3D G3DSA:1.20.1090.10 183 383 1.1E-31 T 11-10-2018 VSVS12_03855 d05b1d5de9116f80ff18f9701ed5156f 384 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 351 9.0E-78 T 11-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 VSVS12_03855 d05b1d5de9116f80ff18f9701ed5156f 384 SUPERFAMILY SSF56796 5 367 9.55E-94 T 11-10-2018 VSVS12_03855 d05b1d5de9116f80ff18f9701ed5156f 384 Gene3D G3DSA:3.40.50.1970 2 182 5.9E-49 T 11-10-2018 VSVS12_00322 08f4af86da103831b3b57ce9e11b9b5c 288 Pfam PF08340 Domain of unknown function (DUF1732) 204 288 6.4E-34 T 11-10-2018 IPR013551 Domain of unknown function DUF1732 VSVS12_00322 08f4af86da103831b3b57ce9e11b9b5c 288 Pfam PF03755 YicC-like family, N-terminal region 2 154 5.6E-42 T 11-10-2018 IPR013527 YicC-like, N-terminal VSVS12_00322 08f4af86da103831b3b57ce9e11b9b5c 288 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 288 2.6E-116 T 11-10-2018 IPR005229 Conserved hypothetical protein CHP00255 VSVS12_01179 36176da0039a320729923cce3dc88eb7 107 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 31 106 4.5E-19 T 11-10-2018 IPR006260 TonB/TolA, C-terminal VSVS12_01179 36176da0039a320729923cce3dc88eb7 107 Gene3D G3DSA:3.30.1150.10 2 107 4.5E-21 T 11-10-2018 VSVS12_01179 36176da0039a320729923cce3dc88eb7 107 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 30 106 7.5E-21 T 11-10-2018 IPR037682 TonB, C-terminal GO:0055085 VSVS12_01179 36176da0039a320729923cce3dc88eb7 107 SUPERFAMILY SSF74653 28 104 1.2E-19 T 11-10-2018 VSVS12_00259 c2e3236405e1e54ca8a2f9230805ac8e 111 Gene3D G3DSA:3.40.50.20 1 81 4.0E-19 T 11-10-2018 VSVS12_00259 c2e3236405e1e54ca8a2f9230805ac8e 111 SUPERFAMILY SSF52440 1 88 5.32E-17 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VSVS12_03524 306758804aaad0892b1eadd17527aad1 425 Gene3D G3DSA:2.30.40.10 8 409 4.6E-176 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VSVS12_03524 306758804aaad0892b1eadd17527aad1 425 SUPERFAMILY SSF51338 1 76 7.2E-7 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VSVS12_03524 306758804aaad0892b1eadd17527aad1 425 SUPERFAMILY SSF51556 54 372 1.2E-104 T 11-10-2018 IPR032466 Metal-dependent hydrolase VSVS12_03524 306758804aaad0892b1eadd17527aad1 425 Pfam PF07969 Amidohydrolase family 43 403 4.0E-51 T 11-10-2018 IPR013108 Amidohydrolase 3 VSVS12_03524 306758804aaad0892b1eadd17527aad1 425 Gene3D G3DSA:3.20.20.140 55 362 4.6E-176 T 11-10-2018 VSVS12_00860 7216ac382cb78a7ca5665c35cd54fa65 104 Pfam PF01527 Transposase 7 82 6.6E-15 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 VSVS12_00860 7216ac382cb78a7ca5665c35cd54fa65 104 SUPERFAMILY SSF46689 6 99 2.33E-15 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_00860 7216ac382cb78a7ca5665c35cd54fa65 104 Gene3D G3DSA:1.10.10.60 10 96 1.7E-9 T 11-10-2018 VSVS12_03115 779ced9363403a0147b70b374699cce8 142 Pfam PF05232 Chlorhexidine efflux transporter 2 62 2.2E-19 T 11-10-2018 IPR007896 Chlorhexidine efflux transporter VSVS12_03115 779ced9363403a0147b70b374699cce8 142 Pfam PF05232 Chlorhexidine efflux transporter 69 131 1.5E-23 T 11-10-2018 IPR007896 Chlorhexidine efflux transporter VSVS12_02721 4d53e8781d14bb86f390f9e146058aba 283 Pfam PF01076 Plasmid recombination enzyme 6 185 4.8E-30 T 11-10-2018 IPR001668 Plasmid recombination enzyme GO:0003677|GO:0005727|GO:0006310 VSVS12_02721 4d53e8781d14bb86f390f9e146058aba 283 Gene3D G3DSA:3.30.930.30 5 178 1.2E-36 T 11-10-2018 VSVS12_02721 4d53e8781d14bb86f390f9e146058aba 283 SUPERFAMILY SSF161270 165 247 2.22E-6 T 11-10-2018 VSVS12_02675 d4e3f1b32a54eb4f6dee12884bb28f95 466 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 465 4.1E-265 T 11-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 VSVS12_02675 d4e3f1b32a54eb4f6dee12884bb28f95 466 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 VSVS12_02675 d4e3f1b32a54eb4f6dee12884bb28f95 466 Gene3D G3DSA:3.30.499.20 4 286 1.0E-99 T 11-10-2018 VSVS12_02675 d4e3f1b32a54eb4f6dee12884bb28f95 466 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 466 60.408 T 11-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 VSVS12_02675 d4e3f1b32a54eb4f6dee12884bb28f95 466 SUPERFAMILY SSF53732 1 465 3.53E-165 T 11-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 VSVS12_02675 d4e3f1b32a54eb4f6dee12884bb28f95 466 PRINTS PR00415 Aconitase family signature 82 95 9.0E-51 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VSVS12_02675 d4e3f1b32a54eb4f6dee12884bb28f95 466 PRINTS PR00415 Aconitase family signature 286 300 9.0E-51 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VSVS12_02675 d4e3f1b32a54eb4f6dee12884bb28f95 466 PRINTS PR00415 Aconitase family signature 133 148 9.0E-51 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VSVS12_02675 d4e3f1b32a54eb4f6dee12884bb28f95 466 PRINTS PR00415 Aconitase family signature 209 222 9.0E-51 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VSVS12_02675 d4e3f1b32a54eb4f6dee12884bb28f95 466 PRINTS PR00415 Aconitase family signature 119 132 9.0E-51 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VSVS12_02675 d4e3f1b32a54eb4f6dee12884bb28f95 466 PRINTS PR00415 Aconitase family signature 108 116 9.0E-51 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VSVS12_02675 d4e3f1b32a54eb4f6dee12884bb28f95 466 PRINTS PR00415 Aconitase family signature 195 208 9.0E-51 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VSVS12_02675 d4e3f1b32a54eb4f6dee12884bb28f95 466 PRINTS PR00415 Aconitase family signature 399 412 9.0E-51 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VSVS12_02675 d4e3f1b32a54eb4f6dee12884bb28f95 466 PRINTS PR00415 Aconitase family signature 343 354 9.0E-51 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VSVS12_02675 d4e3f1b32a54eb4f6dee12884bb28f95 466 Pfam PF00330 Aconitase family (aconitate hydratase) 7 457 3.0E-160 T 11-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 VSVS12_02675 d4e3f1b32a54eb4f6dee12884bb28f95 466 Gene3D G3DSA:3.30.499.10 327 466 2.0E-49 T 11-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 VSVS12_02675 d4e3f1b32a54eb4f6dee12884bb28f95 466 ProSitePatterns PS01244 Aconitase family signature 2. 399 412 - T 11-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 VSVS12_03916 c8b69aecabb4e3482637a5ef68900780 516 Pfam PF08447 PAS fold 26 108 3.7E-13 T 11-10-2018 IPR013655 PAS fold-3 GO:0005515 VSVS12_03916 c8b69aecabb4e3482637a5ef68900780 516 SUPERFAMILY SSF58104 261 514 1.02E-66 T 11-10-2018 VSVS12_03916 c8b69aecabb4e3482637a5ef68900780 516 SMART SM00283 255 516 1.8E-64 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_03916 c8b69aecabb4e3482637a5ef68900780 516 Gene3D G3DSA:3.30.450.20 4 110 4.0E-16 T 11-10-2018 VSVS12_03916 c8b69aecabb4e3482637a5ef68900780 516 SUPERFAMILY SSF55785 14 108 6.11E-20 T 11-10-2018 IPR035965 PAS domain superfamily VSVS12_03916 c8b69aecabb4e3482637a5ef68900780 516 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 15 103 1.0E-7 T 11-10-2018 IPR000014 PAS domain VSVS12_03916 c8b69aecabb4e3482637a5ef68900780 516 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 277 306 1.4E-22 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VSVS12_03916 c8b69aecabb4e3482637a5ef68900780 516 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 353 380 1.4E-22 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VSVS12_03916 c8b69aecabb4e3482637a5ef68900780 516 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 382 411 1.4E-22 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VSVS12_03916 c8b69aecabb4e3482637a5ef68900780 516 Gene3D G3DSA:1.10.287.950 237 516 3.3E-59 T 11-10-2018 VSVS12_03916 c8b69aecabb4e3482637a5ef68900780 516 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 328 481 5.3E-42 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_03529 d2cbc0d8a14cd2db5ae6d3104fd99fa7 301 SUPERFAMILY SSF103481 189 287 1.28E-11 T 11-10-2018 VSVS12_03529 d2cbc0d8a14cd2db5ae6d3104fd99fa7 301 SUPERFAMILY SSF103481 35 138 3.66E-13 T 11-10-2018 VSVS12_03529 d2cbc0d8a14cd2db5ae6d3104fd99fa7 301 Pfam PF00892 EamA-like transporter family 150 280 1.4E-15 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VSVS12_03529 d2cbc0d8a14cd2db5ae6d3104fd99fa7 301 Pfam PF00892 EamA-like transporter family 3 135 2.9E-21 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VSVS12_04528 c8be8086aefab617df22c677f5942355 271 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 60 201 2.3E-10 T 11-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 VSVS12_04528 c8be8086aefab617df22c677f5942355 271 SUPERFAMILY SSF51695 57 236 6.02E-21 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VSVS12_04528 c8be8086aefab617df22c677f5942355 271 Gene3D G3DSA:3.20.20.190 36 268 1.4E-30 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VSVS12_02301 f3648bbde74ae59e77330995485ad7c3 441 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 24 434 2.9E-194 T 11-10-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VSVS12_02301 f3648bbde74ae59e77330995485ad7c3 441 Gene3D G3DSA:3.40.50.12240 19 439 4.4E-156 T 11-10-2018 VSVS12_02301 f3648bbde74ae59e77330995485ad7c3 441 SMART SM00382 158 342 1.2E-5 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_02301 f3648bbde74ae59e77330995485ad7c3 441 SUPERFAMILY SSF52540 93 362 4.81E-95 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02301 f3648bbde74ae59e77330995485ad7c3 441 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 348 357 - T 11-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VSVS12_02301 f3648bbde74ae59e77330995485ad7c3 441 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 146 357 1.5E-72 T 11-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VSVS12_02301 f3648bbde74ae59e77330995485ad7c3 441 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 22 437 2.2E-173 T 11-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 VSVS12_01851 cdab2bc70bbe7d4bd637816ebf7d8280 143 Gene3D G3DSA:3.10.450.40 72 131 9.3E-7 T 11-10-2018 VSVS12_01161 d8740ed6130e4c84101363bb82bc6ade 115 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 36 45 - T 11-10-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VSVS12_01161 d8740ed6130e4c84101363bb82bc6ade 115 Pfam PF01081 KDPG and KHG aldolase 5 103 9.3E-31 T 11-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 VSVS12_01161 d8740ed6130e4c84101363bb82bc6ade 115 Gene3D G3DSA:3.20.20.70 1 113 8.1E-38 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_01161 d8740ed6130e4c84101363bb82bc6ade 115 SUPERFAMILY SSF51569 3 108 5.49E-32 T 11-10-2018 VSVS12_03369 f002142e2f87b7522e82978f142895af 777 Pfam PF10101 Predicted membrane protein (DUF2339) 14 322 1.6E-42 T 11-10-2018 IPR019286 Protein of unknown function DUF2339, transmembrane VSVS12_03369 f002142e2f87b7522e82978f142895af 777 Pfam PF10101 Predicted membrane protein (DUF2339) 322 762 3.5E-53 T 11-10-2018 IPR019286 Protein of unknown function DUF2339, transmembrane VSVS12_02393 32a3bb1cfa4dacf9fd600e153ef146a0 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 44.477 T 11-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 VSVS12_02393 32a3bb1cfa4dacf9fd600e153ef146a0 208 Gene3D G3DSA:3.40.50.2020 1 208 3.0E-73 T 11-10-2018 VSVS12_02393 32a3bb1cfa4dacf9fd600e153ef146a0 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 2 208 8.0E-92 T 11-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 VSVS12_02393 32a3bb1cfa4dacf9fd600e153ef146a0 208 SUPERFAMILY SSF53271 3 206 1.3E-66 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like VSVS12_02393 32a3bb1cfa4dacf9fd600e153ef146a0 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 1.6E-64 T 11-10-2018 VSVS12_01022 5fafef05e5e0996a1485b554f0ee6434 73 Gene3D G3DSA:3.30.110.40 1 70 3.7E-10 T 11-10-2018 IPR036868 TusA-like domain superfamily VSVS12_01022 5fafef05e5e0996a1485b554f0ee6434 73 Pfam PF01206 Sulfurtransferase TusA 4 63 1.1E-13 T 11-10-2018 IPR001455 TusA-like domain VSVS12_01022 5fafef05e5e0996a1485b554f0ee6434 73 SUPERFAMILY SSF64307 3 70 2.09E-13 T 11-10-2018 IPR036868 TusA-like domain superfamily VSVS12_03594 d36e645d8ea9daf8d6b2878046b7c991 490 Pfam PF00854 POT family 84 431 4.4E-13 T 11-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 VSVS12_03594 d36e645d8ea9daf8d6b2878046b7c991 490 Gene3D G3DSA:1.20.1250.20 8 475 4.4E-62 T 11-10-2018 VSVS12_03594 d36e645d8ea9daf8d6b2878046b7c991 490 SUPERFAMILY SSF103473 7 475 7.46E-21 T 11-10-2018 IPR036259 MFS transporter superfamily VSVS12_03419 d85a7e42f1b8d07cffbff0a18e83504c 298 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 89 271 1.1E-48 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VSVS12_03419 d85a7e42f1b8d07cffbff0a18e83504c 298 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 33 275 9.6E-68 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 VSVS12_03419 d85a7e42f1b8d07cffbff0a18e83504c 298 Gene3D G3DSA:1.20.1640.10 97 286 6.3E-11 T 11-10-2018 VSVS12_03419 d85a7e42f1b8d07cffbff0a18e83504c 298 Pfam PF07549 SecD/SecF GG Motif 27 52 7.7E-9 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VSVS12_03419 d85a7e42f1b8d07cffbff0a18e83504c 298 Pfam PF02355 Protein export membrane protein 100 278 3.3E-59 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VSVS12_03419 d85a7e42f1b8d07cffbff0a18e83504c 298 PRINTS PR01755 Bacterial translocase SecF protein signature 223 238 3.9E-27 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VSVS12_03419 d85a7e42f1b8d07cffbff0a18e83504c 298 PRINTS PR01755 Bacterial translocase SecF protein signature 32 47 3.9E-27 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VSVS12_03419 d85a7e42f1b8d07cffbff0a18e83504c 298 PRINTS PR01755 Bacterial translocase SecF protein signature 191 209 3.9E-27 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VSVS12_03419 d85a7e42f1b8d07cffbff0a18e83504c 298 PRINTS PR01755 Bacterial translocase SecF protein signature 143 157 3.9E-27 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VSVS12_03419 d85a7e42f1b8d07cffbff0a18e83504c 298 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 5 286 23.29 T 11-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 VSVS12_03419 d85a7e42f1b8d07cffbff0a18e83504c 298 SUPERFAMILY SSF82866 109 277 1.44E-34 T 11-10-2018 VSVS12_00830 08d5b75e955c6e08a6ea16d0d1fe7999 261 PIRSF PIRSF009437 1 261 1.2E-100 T 11-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 VSVS12_00830 08d5b75e955c6e08a6ea16d0d1fe7999 261 Pfam PF04205 FMN-binding domain 148 243 8.5E-15 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 VSVS12_00830 08d5b75e955c6e08a6ea16d0d1fe7999 261 SMART SM00900 148 246 4.6E-32 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 VSVS12_00830 08d5b75e955c6e08a6ea16d0d1fe7999 261 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 6 258 34.968 T 11-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 VSVS12_00830 08d5b75e955c6e08a6ea16d0d1fe7999 261 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 5 254 1.9E-92 T 11-10-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0010181|GO:0016021|GO:0016655 VSVS12_02688 03cd0e992aa03082ebbb967115a6969c 244 SUPERFAMILY SSF88713 1 243 8.23E-68 T 11-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 VSVS12_02688 03cd0e992aa03082ebbb967115a6969c 244 Hamap MF_01246 Chitooligosaccharide deacetylase [chbG]. 1 240 37.283 T 11-10-2018 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria GO:0000272|GO:0016811 VSVS12_02688 03cd0e992aa03082ebbb967115a6969c 244 Pfam PF04794 YdjC-like protein 2 232 3.5E-53 T 11-10-2018 IPR006879 Carbohydrate deacetylase YdjC-like VSVS12_02688 03cd0e992aa03082ebbb967115a6969c 244 Gene3D G3DSA:3.20.20.370 1 244 1.1E-70 T 11-10-2018 VSVS12_02652 dfc9d6789ef5c786ecb06e142a100bb6 156 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 18 149 1.3E-29 T 11-10-2018 VSVS12_02652 dfc9d6789ef5c786ecb06e142a100bb6 156 PIRSF PIRSF004923 1 156 2.0E-36 T 11-10-2018 IPR026268 Protein RseC VSVS12_04308 2b8776dd7b37a2710c6f2a94ceaaedfd 75 SMART SM01022 8 75 5.0E-5 T 11-10-2018 IPR007374 ASCH domain VSVS12_04308 2b8776dd7b37a2710c6f2a94ceaaedfd 75 Pfam PF04266 ASCH domain 9 74 2.7E-8 T 11-10-2018 IPR007374 ASCH domain VSVS12_04308 2b8776dd7b37a2710c6f2a94ceaaedfd 75 SUPERFAMILY SSF88697 5 74 1.69E-20 T 11-10-2018 IPR015947 PUA-like superfamily VSVS12_04308 2b8776dd7b37a2710c6f2a94ceaaedfd 75 Gene3D G3DSA:2.30.130.30 3 75 1.5E-28 T 11-10-2018 VSVS12_03252 9f3b275ce77b96d2103caea82abb61ca 305 Gene3D G3DSA:1.10.1180.10 222 304 2.8E-14 T 11-10-2018 IPR036733 B transposition protein, C-terminal domain superfamily GO:0003677|GO:0006313 VSVS12_03252 9f3b275ce77b96d2103caea82abb61ca 305 Pfam PF09077 Mu B transposition protein, C terminal 223 298 2.3E-15 T 11-10-2018 IPR009084 B transposition protein, C-terminal GO:0003677|GO:0006313 VSVS12_03252 9f3b275ce77b96d2103caea82abb61ca 305 Gene3D G3DSA:1.10.260.40 1 60 5.7E-9 T 11-10-2018 VSVS12_03252 9f3b275ce77b96d2103caea82abb61ca 305 Pfam PF13401 AAA domain 103 202 2.7E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_03252 9f3b275ce77b96d2103caea82abb61ca 305 SUPERFAMILY SSF52540 103 208 8.75E-8 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03252 9f3b275ce77b96d2103caea82abb61ca 305 SUPERFAMILY SSF47681 222 300 1.31E-11 T 11-10-2018 IPR036733 B transposition protein, C-terminal domain superfamily GO:0003677|GO:0006313 VSVS12_03586 49c428a61f7b536cbb26c685c985af56 107 SUPERFAMILY SSF50022 1 106 2.97E-34 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VSVS12_03586 49c428a61f7b536cbb26c685c985af56 107 Pfam PF13806 Rieske-like [2Fe-2S] domain 3 105 1.1E-38 T 11-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 VSVS12_03586 49c428a61f7b536cbb26c685c985af56 107 Gene3D G3DSA:2.102.10.10 1 107 4.3E-31 T 11-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 VSVS12_03586 49c428a61f7b536cbb26c685c985af56 107 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 4 106 5.5E-34 T 11-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 VSVS12_01626 516090b8b74756e247b23a7cad5b6bfb 125 Gene3D G3DSA:3.40.50.300 1 124 1.7E-27 T 11-10-2018 VSVS12_01626 516090b8b74756e247b23a7cad5b6bfb 125 SUPERFAMILY SSF52540 2 101 9.88E-13 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01626 516090b8b74756e247b23a7cad5b6bfb 125 Pfam PF13671 AAA domain 4 99 2.0E-11 T 11-10-2018 VSVS12_02348 b67e87fae775aa5cd43e7e244df7bea8 315 Gene3D G3DSA:3.30.1330.60 153 301 2.8E-50 T 11-10-2018 IPR036737 OmpA-like domain superfamily VSVS12_02348 b67e87fae775aa5cd43e7e244df7bea8 315 SUPERFAMILY SSF103088 182 299 8.76E-29 T 11-10-2018 IPR036737 OmpA-like domain superfamily VSVS12_02348 b67e87fae775aa5cd43e7e244df7bea8 315 Pfam PF00691 OmpA family 195 293 2.5E-16 T 11-10-2018 IPR006665 OmpA-like domain VSVS12_02348 b67e87fae775aa5cd43e7e244df7bea8 315 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 10 57 5.0E-19 T 11-10-2018 IPR025713 Motility protein B, N-terminal domain VSVS12_01021 28b608bfde6e24b81482e829eceb90ad 485 Gene3D G3DSA:1.25.40.10 255 474 2.4E-21 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_01021 28b608bfde6e24b81482e829eceb90ad 485 SMART SM00028 308 341 60.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_01021 28b608bfde6e24b81482e829eceb90ad 485 SMART SM00028 342 375 1.3 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_01021 28b608bfde6e24b81482e829eceb90ad 485 SMART SM00028 427 460 77.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_01021 28b608bfde6e24b81482e829eceb90ad 485 Gene3D G3DSA:3.30.2010.10 76 149 4.2E-7 T 11-10-2018 VSVS12_01021 28b608bfde6e24b81482e829eceb90ad 485 Pfam PF01435 Peptidase family M48 71 253 1.0E-27 T 11-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 VSVS12_01021 28b608bfde6e24b81482e829eceb90ad 485 Pfam PF14559 Tetratricopeptide repeat 356 416 5.1E-9 T 11-10-2018 VSVS12_01021 28b608bfde6e24b81482e829eceb90ad 485 SUPERFAMILY SSF48452 310 458 9.32E-20 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_01021 28b608bfde6e24b81482e829eceb90ad 485 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 3 484 39.515 T 11-10-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 VSVS12_03674 6fea95c3294f59f28a1561b494f3c322 205 Pfam PF07819 PGAP1-like protein 55 118 2.0E-7 T 11-10-2018 IPR012908 GPI inositol-deacylase PGAP1-like GO:0016788 Reactome: R-HSA-162791 VSVS12_03674 6fea95c3294f59f28a1561b494f3c322 205 SUPERFAMILY SSF53474 3 174 2.56E-14 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold VSVS12_04496 ed2a9583cd7c77e0b1d4f09dca2d0163 263 Pfam PF01695 IstB-like ATP binding protein 60 234 4.7E-64 T 11-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 VSVS12_04496 ed2a9583cd7c77e0b1d4f09dca2d0163 263 SUPERFAMILY SSF52540 67 242 1.39E-23 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_04496 ed2a9583cd7c77e0b1d4f09dca2d0163 263 Gene3D G3DSA:3.40.50.300 65 249 1.8E-46 T 11-10-2018 VSVS12_04496 ed2a9583cd7c77e0b1d4f09dca2d0163 263 PIRSF PIRSF003073 1 254 3.4E-80 T 11-10-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein VSVS12_04496 ed2a9583cd7c77e0b1d4f09dca2d0163 263 SMART SM00382 100 237 2.3E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_01263 1f52bfa63a7cffdb0ecf6c4d359c79e8 225 Gene3D G3DSA:3.40.50.300 48 157 6.9E-31 T 11-10-2018 VSVS12_01263 1f52bfa63a7cffdb0ecf6c4d359c79e8 225 SUPERFAMILY SSF52540 47 156 1.95E-26 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01263 1f52bfa63a7cffdb0ecf6c4d359c79e8 225 Pfam PF00154 recA bacterial DNA recombination protein 17 126 2.4E-6 T 11-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 VSVS12_01263 1f52bfa63a7cffdb0ecf6c4d359c79e8 225 PIRSF PIRSF037290 1 216 1.3E-61 T 11-10-2018 IPR017166 Uncharacterised conserved protein UCP037290 VSVS12_00125 5f72770a665ad6efa5761307af1cdb36 126 Pfam PF02416 mttA/Hcf106 family 4 31 5.6E-5 T 11-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 VSVS12_00125 5f72770a665ad6efa5761307af1cdb36 126 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 3.0E-25 T 11-10-2018 VSVS12_00125 5f72770a665ad6efa5761307af1cdb36 126 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 3.0E-25 T 11-10-2018 VSVS12_00125 5f72770a665ad6efa5761307af1cdb36 126 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 3.0E-25 T 11-10-2018 VSVS12_00125 5f72770a665ad6efa5761307af1cdb36 126 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 124 18.106 T 11-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 VSVS12_00125 5f72770a665ad6efa5761307af1cdb36 126 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 1.2E-32 T 11-10-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 VSVS12_02385 72c02f4ea8dd941328640de0dc76b95a 528 Gene3D G3DSA:1.20.1530.20 2 362 6.0E-44 T 11-10-2018 IPR038770 Sodium/solute symporter superfamily VSVS12_02385 72c02f4ea8dd941328640de0dc76b95a 528 Pfam PF02254 TrkA-N domain 388 504 5.0E-18 T 11-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 VSVS12_02385 72c02f4ea8dd941328640de0dc76b95a 528 Gene3D G3DSA:3.40.50.720 379 527 1.5E-30 T 11-10-2018 VSVS12_02385 72c02f4ea8dd941328640de0dc76b95a 528 Pfam PF00999 Sodium/hydrogen exchanger family 3 347 2.8E-34 T 11-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 VSVS12_02385 72c02f4ea8dd941328640de0dc76b95a 528 SUPERFAMILY SSF51735 387 518 6.19E-14 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_03950 38726c2185937aee8e458e6177f6cf8a 515 Pfam PF14707 C-terminal region of aryl-sulfatase 409 504 1.2E-7 T 11-10-2018 VSVS12_03950 38726c2185937aee8e458e6177f6cf8a 515 SUPERFAMILY SSF53649 26 502 7.12E-108 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VSVS12_03950 38726c2185937aee8e458e6177f6cf8a 515 Pfam PF00884 Sulfatase 30 371 8.6E-63 T 11-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 VSVS12_03950 38726c2185937aee8e458e6177f6cf8a 515 Gene3D G3DSA:3.40.720.10 27 446 5.3E-93 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VSVS12_00732 2473fa433d3e99a5b7bd8e858b9672c0 151 SUPERFAMILY SSF75420 2 83 7.45E-26 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily VSVS12_00732 2473fa433d3e99a5b7bd8e858b9672c0 151 Pfam PF17384 RimP C-terminal SH3 domain 86 151 1.8E-20 T 11-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal VSVS12_00732 2473fa433d3e99a5b7bd8e858b9672c0 151 SUPERFAMILY SSF74942 84 151 3.4E-17 T 11-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily VSVS12_00732 2473fa433d3e99a5b7bd8e858b9672c0 151 Gene3D G3DSA:3.30.300.70 1 80 5.7E-26 T 11-10-2018 IPR035956 RimP, N-terminal domain superfamily VSVS12_00732 2473fa433d3e99a5b7bd8e858b9672c0 151 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 6 151 24.589 T 11-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 VSVS12_00732 2473fa433d3e99a5b7bd8e858b9672c0 151 Pfam PF02576 RimP N-terminal domain 12 83 1.9E-28 T 11-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal VSVS12_01350 cf5a7f6a61ccc93f1e327f6d3fedf878 116 Pfam PF01230 HIT domain 12 107 1.5E-28 T 11-10-2018 IPR001310 Histidine triad (HIT) protein VSVS12_01350 cf5a7f6a61ccc93f1e327f6d3fedf878 116 Gene3D G3DSA:3.30.428.10 1 110 1.1E-35 T 11-10-2018 IPR036265 HIT-like superfamily VSVS12_01350 cf5a7f6a61ccc93f1e327f6d3fedf878 116 PRINTS PR00332 Histidine triad family signature 27 45 3.1E-19 T 11-10-2018 IPR001310 Histidine triad (HIT) protein VSVS12_01350 cf5a7f6a61ccc93f1e327f6d3fedf878 116 PRINTS PR00332 Histidine triad family signature 6 22 3.1E-19 T 11-10-2018 IPR001310 Histidine triad (HIT) protein VSVS12_01350 cf5a7f6a61ccc93f1e327f6d3fedf878 116 PRINTS PR00332 Histidine triad family signature 95 105 3.1E-19 T 11-10-2018 IPR001310 Histidine triad (HIT) protein VSVS12_01350 cf5a7f6a61ccc93f1e327f6d3fedf878 116 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 11-10-2018 IPR019808 Histidine triad, conserved site VSVS12_01350 cf5a7f6a61ccc93f1e327f6d3fedf878 116 SUPERFAMILY SSF54197 2 113 4.33E-34 T 11-10-2018 IPR036265 HIT-like superfamily VSVS12_00147 e8fc71be4edd29054e81482eb99ebbcc 107 Hamap MF_01088 Universal stress protein B [uspB]. 1 107 35.37 T 11-10-2018 IPR019598 Universal stress protein B VSVS12_00147 e8fc71be4edd29054e81482eb99ebbcc 107 Pfam PF10625 Universal stress protein B (UspB) 1 106 8.3E-50 T 11-10-2018 IPR019598 Universal stress protein B VSVS12_00766 65602c31ba7aa407645c711a126b64e8 115 Pfam PF10973 Protein of unknown function (DUF2799) 28 108 8.9E-23 T 11-10-2018 IPR021242 Protein of unknown function DUF2799 VSVS12_02445 01b8884f61cbd3b8ec54f738f25becb1 301 SUPERFAMILY SSF55186 129 281 8.22E-13 T 11-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 VSVS12_04602 b775a513e1994cf57a01f0053608d413 171 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 3 152 1.3E-6 T 11-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain VSVS12_04602 b775a513e1994cf57a01f0053608d413 171 SUPERFAMILY SSF52540 1 154 4.96E-15 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_04602 b775a513e1994cf57a01f0053608d413 171 Gene3D G3DSA:3.40.50.300 2 170 5.0E-17 T 11-10-2018 VSVS12_02054 d587cc6bfd5d1daf2bb2a818c26d2ddd 261 SMART SM00382 38 227 5.6E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_02054 d587cc6bfd5d1daf2bb2a818c26d2ddd 261 Gene3D G3DSA:3.40.50.300 1 259 2.9E-69 T 11-10-2018 VSVS12_02054 d587cc6bfd5d1daf2bb2a818c26d2ddd 261 Pfam PF00005 ABC transporter 30 178 3.3E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_02054 d587cc6bfd5d1daf2bb2a818c26d2ddd 261 SUPERFAMILY SSF52540 4 252 7.21E-58 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02104 b3169b635b226d1539e731e71535da2a 225 SMART SM00862 147 221 3.0E-11 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VSVS12_02104 b3169b635b226d1539e731e71535da2a 225 Gene3D G3DSA:3.40.50.2300 1 128 2.4E-34 T 11-10-2018 VSVS12_02104 b3169b635b226d1539e731e71535da2a 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 221 1.6E-15 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VSVS12_02104 b3169b635b226d1539e731e71535da2a 225 SMART SM00448 2 113 2.7E-37 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_02104 b3169b635b226d1539e731e71535da2a 225 Gene3D G3DSA:1.10.10.10 129 225 7.8E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_02104 b3169b635b226d1539e731e71535da2a 225 Pfam PF00072 Response regulator receiver domain 4 112 5.1E-26 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_02104 b3169b635b226d1539e731e71535da2a 225 SUPERFAMILY SSF52172 2 175 1.57E-38 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_02634 14dadd0010ba71946873a0eaced1b66c 419 Pfam PF01384 Phosphate transporter family 26 407 4.1E-112 T 11-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 VSVS12_03947 9d81be80acf7b26064c91165dfb5783b 143 Pfam PF14352 Domain of unknown function (DUF4402) 55 142 1.9E-8 T 11-10-2018 IPR025514 Protein of unknown function DUF4402 VSVS12_02474 a72e07a16e18d92d1dfa568018beadce 552 SUPERFAMILY SSF161098 264 533 2.75E-35 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_02474 a72e07a16e18d92d1dfa568018beadce 552 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 280 543 3.2E-76 T 11-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 VSVS12_02474 a72e07a16e18d92d1dfa568018beadce 552 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 319 541 4.3E-17 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VSVS12_02474 a72e07a16e18d92d1dfa568018beadce 552 Gene3D G3DSA:1.10.3720.10 297 543 1.6E-29 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_03686 600faf931ee8fc3e507143574851fc35 459 Pfam PF07690 Major Facilitator Superfamily 38 392 7.1E-41 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VSVS12_03686 600faf931ee8fc3e507143574851fc35 459 SUPERFAMILY SSF103473 18 438 2.09E-63 T 11-10-2018 IPR036259 MFS transporter superfamily VSVS12_03686 600faf931ee8fc3e507143574851fc35 459 Gene3D G3DSA:1.20.1250.20 243 444 2.1E-33 T 11-10-2018 VSVS12_03686 600faf931ee8fc3e507143574851fc35 459 PIRSF PIRSF002808 11 452 1.2E-103 T 11-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 VSVS12_03686 600faf931ee8fc3e507143574851fc35 459 Gene3D G3DSA:1.20.1250.20 21 221 1.1E-36 T 11-10-2018 VSVS12_01431 ed9ec9a40a1fb62d23e027704c39c181 244 SUPERFAMILY SSF55315 4 93 2.26E-11 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like VSVS12_01431 ed9ec9a40a1fb62d23e027704c39c181 244 Gene3D G3DSA:3.40.1280.10 96 244 1.1E-40 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VSVS12_01431 ed9ec9a40a1fb62d23e027704c39c181 244 Pfam PF00588 SpoU rRNA Methylase family 102 236 1.5E-29 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VSVS12_01431 ed9ec9a40a1fb62d23e027704c39c181 244 SUPERFAMILY SSF75217 98 243 1.5E-33 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases VSVS12_01431 ed9ec9a40a1fb62d23e027704c39c181 244 Gene3D G3DSA:3.30.1330.30 1 93 1.4E-16 T 11-10-2018 IPR029064 50S ribosomal protein L30e-like VSVS12_01095 65bf911d6ba492173c2a1c7554abba4e 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 146 5.8E-34 T 11-10-2018 IPR002178 PTS EIIA type-2 domain VSVS12_01095 65bf911d6ba492173c2a1c7554abba4e 147 SUPERFAMILY SSF55804 1 146 1.44E-34 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VSVS12_01095 65bf911d6ba492173c2a1c7554abba4e 147 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 11-10-2018 IPR002178 PTS EIIA type-2 domain VSVS12_01095 65bf911d6ba492173c2a1c7554abba4e 147 Gene3D G3DSA:3.40.930.10 1 147 4.6E-49 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VSVS12_02764 3251b45b767e2ca3d69e2501706b3b1b 407 Gene3D G3DSA:1.20.81.30 259 369 1.3E-26 T 11-10-2018 VSVS12_02764 3251b45b767e2ca3d69e2501706b3b1b 407 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 167 195 - T 11-10-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 VSVS12_02764 3251b45b767e2ca3d69e2501706b3b1b 407 Gene3D G3DSA:1.20.81.30 59 176 1.2E-25 T 11-10-2018 VSVS12_02764 3251b45b767e2ca3d69e2501706b3b1b 407 Pfam PF00482 Type II secretion system (T2SS), protein F 276 398 6.8E-25 T 11-10-2018 IPR018076 Type II secretion system F domain VSVS12_02764 3251b45b767e2ca3d69e2501706b3b1b 407 Pfam PF00482 Type II secretion system (T2SS), protein F 74 195 2.9E-26 T 11-10-2018 IPR018076 Type II secretion system F domain VSVS12_02764 3251b45b767e2ca3d69e2501706b3b1b 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 387 406 4.9E-20 T 11-10-2018 IPR003004 GspF/PilC family VSVS12_02764 3251b45b767e2ca3d69e2501706b3b1b 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 167 195 4.9E-20 T 11-10-2018 IPR003004 GspF/PilC family VSVS12_02764 3251b45b767e2ca3d69e2501706b3b1b 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 371 385 4.9E-20 T 11-10-2018 IPR003004 GspF/PilC family VSVS12_02764 3251b45b767e2ca3d69e2501706b3b1b 407 PRINTS PR00812 Bacterial general secretion pathway protein F signature 69 81 4.9E-20 T 11-10-2018 IPR003004 GspF/PilC family VSVS12_01602 86898756cc45c30eee598bca0f62cd3e 358 SUPERFAMILY SSF56601 30 356 1.16E-63 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VSVS12_01602 86898756cc45c30eee598bca0f62cd3e 358 Gene3D G3DSA:3.40.710.10 28 353 1.7E-71 T 11-10-2018 VSVS12_01602 86898756cc45c30eee598bca0f62cd3e 358 Pfam PF00144 Beta-lactamase 51 340 5.6E-45 T 11-10-2018 IPR001466 Beta-lactamase-related VSVS12_00256 748f793d97dad0cee1c2ca771bf38f81 158 Hamap MF_00598 Protein Smg [smg]. 2 158 32.926 T 11-10-2018 IPR007456 Smg VSVS12_00256 748f793d97dad0cee1c2ca771bf38f81 158 Pfam PF04361 Protein of unknown function (DUF494) 2 158 2.1E-59 T 11-10-2018 IPR007456 Smg VSVS12_00492 756d9a7dbdd6c76983597e7873ac5986 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00492 756d9a7dbdd6c76983597e7873ac5986 37 Pfam PF00444 Ribosomal protein L36 1 37 9.4E-19 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00492 756d9a7dbdd6c76983597e7873ac5986 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.137 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00492 756d9a7dbdd6c76983597e7873ac5986 37 SUPERFAMILY SSF57840 1 37 1.02E-16 T 11-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00492 756d9a7dbdd6c76983597e7873ac5986 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 4.0E-23 T 11-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00492 756d9a7dbdd6c76983597e7873ac5986 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 37 3.0E-9 T 11-10-2018 VSVS12_00537 6ce3304863aad6f0987a300428eaa0cd 148 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 145 1.2E-36 T 11-10-2018 IPR002178 PTS EIIA type-2 domain VSVS12_00537 6ce3304863aad6f0987a300428eaa0cd 148 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 2 145 2.4E-51 T 11-10-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 VSVS12_00537 6ce3304863aad6f0987a300428eaa0cd 148 SUPERFAMILY SSF55804 1 146 4.84E-40 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VSVS12_00537 6ce3304863aad6f0987a300428eaa0cd 148 Gene3D G3DSA:3.40.930.10 1 148 2.8E-51 T 11-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 VSVS12_00537 6ce3304863aad6f0987a300428eaa0cd 148 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 11-10-2018 IPR002178 PTS EIIA type-2 domain VSVS12_03835 413dc26ec3b4f869e1c7348cfca9f50f 205 Gene3D G3DSA:3.40.30.10 22 205 2.0E-39 T 11-10-2018 VSVS12_03835 413dc26ec3b4f869e1c7348cfca9f50f 205 SUPERFAMILY SSF52833 43 204 6.06E-23 T 11-10-2018 IPR036249 Thioredoxin-like superfamily VSVS12_03835 413dc26ec3b4f869e1c7348cfca9f50f 205 Pfam PF13462 Thioredoxin 46 199 2.7E-6 T 11-10-2018 IPR012336 Thioredoxin-like fold VSVS12_02641 0a51b95cd6fbbbaac6847e4adc7133c6 265 Gene3D G3DSA:1.10.287.1080 132 264 2.6E-44 T 11-10-2018 VSVS12_02641 0a51b95cd6fbbbaac6847e4adc7133c6 265 Gene3D G3DSA:1.10.287.1080 2 126 6.5E-46 T 11-10-2018 VSVS12_02641 0a51b95cd6fbbbaac6847e4adc7133c6 265 SUPERFAMILY SSF101386 3 105 4.3E-25 T 11-10-2018 VSVS12_02641 0a51b95cd6fbbbaac6847e4adc7133c6 265 SUPERFAMILY SSF101386 138 240 4.58E-23 T 11-10-2018 VSVS12_02641 0a51b95cd6fbbbaac6847e4adc7133c6 265 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 28 101 8.7E-29 T 11-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core VSVS12_02641 0a51b95cd6fbbbaac6847e4adc7133c6 265 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 171 229 4.2E-5 T 11-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core VSVS12_02641 0a51b95cd6fbbbaac6847e4adc7133c6 265 TIGRFAM TIGR00444 mazG: MazG family protein 11 260 1.6E-102 T 11-10-2018 IPR011551 NTP pyrophosphohydrolase MazG VSVS12_04079 2a93e14b0c152e1b8943fce93557a027 194 Pfam PF03691 Uncharacterised protein family (UPF0167) 22 192 4.2E-57 T 11-10-2018 IPR005363 Uncharacterised protein family UPF0167 VSVS12_02025 bb3938d4189f0f70f44de8bee3f453bd 130 Pfam PF16549 Type II secretion system (T2SS) pilotin, S protein 15 128 5.9E-46 T 11-10-2018 IPR016502 Type II secretion system (T2SS) pilotin, S protein VSVS12_02025 bb3938d4189f0f70f44de8bee3f453bd 130 PIRSF PIRSF007010 1 130 2.6E-48 T 11-10-2018 IPR016502 Type II secretion system (T2SS) pilotin, S protein VSVS12_02025 bb3938d4189f0f70f44de8bee3f453bd 130 Gene3D G3DSA:3.30.300.250 19 129 1.6E-44 T 11-10-2018 VSVS12_03360 22ba16fbd0f9a3a752876809529baa9c 529 Pfam PF13520 Amino acid permease 36 474 3.3E-60 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VSVS12_03360 22ba16fbd0f9a3a752876809529baa9c 529 PIRSF PIRSF006060 13 504 2.2E-53 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VSVS12_03360 22ba16fbd0f9a3a752876809529baa9c 529 TIGRFAM TIGR03813 put_Glu_GABA_T: putative glutamate/gamma-aminobutyrate antiporter 35 508 8.5E-242 T 11-10-2018 IPR022520 Putative glutamate/gamma-aminobutyrate antiporter VSVS12_03360 22ba16fbd0f9a3a752876809529baa9c 529 Gene3D G3DSA:1.20.1740.10 31 503 9.3E-29 T 11-10-2018 VSVS12_04024 13e1ebcfe92b3a699b06af06e9c0d258 1912 Pfam PF13086 AAA domain 1383 1423 2.7E-7 T 11-10-2018 VSVS12_04024 13e1ebcfe92b3a699b06af06e9c0d258 1912 Gene3D G3DSA:3.40.50.300 392 632 9.0E-16 T 11-10-2018 VSVS12_04024 13e1ebcfe92b3a699b06af06e9c0d258 1912 Gene3D G3DSA:3.40.50.300 1230 1440 1.0E-14 T 11-10-2018 VSVS12_04024 13e1ebcfe92b3a699b06af06e9c0d258 1912 Pfam PF13604 AAA domain 430 491 2.5E-6 T 11-10-2018 VSVS12_04024 13e1ebcfe92b3a699b06af06e9c0d258 1912 Pfam PF13195 Protein of unknown function (DUF4011) 102 305 3.9E-36 T 11-10-2018 IPR025103 Protein of unknown function DUF4011 VSVS12_04024 13e1ebcfe92b3a699b06af06e9c0d258 1912 Gene3D G3DSA:3.40.960.10 1686 1791 4.1E-16 T 11-10-2018 VSVS12_04024 13e1ebcfe92b3a699b06af06e9c0d258 1912 Pfam PF13087 AAA domain 1458 1641 7.2E-12 T 11-10-2018 VSVS12_04024 13e1ebcfe92b3a699b06af06e9c0d258 1912 SMART SM00952 1733 1790 7.2E-4 T 11-10-2018 IPR013584 RAP domain VSVS12_04024 13e1ebcfe92b3a699b06af06e9c0d258 1912 Gene3D G3DSA:3.40.50.300 1466 1662 2.2E-24 T 11-10-2018 VSVS12_04024 13e1ebcfe92b3a699b06af06e9c0d258 1912 SUPERFAMILY SSF52540 428 1642 5.28E-36 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_04024 13e1ebcfe92b3a699b06af06e9c0d258 1912 SUPERFAMILY SSF52980 1683 1792 3.97E-15 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VSVS12_03470 25cda47055e0f106c59b701db5921d5d 422 Pfam PF03382 Mycoplasma protein of unknown function, DUF285 77 167 4.8E-31 T 11-10-2018 IPR005046 Protein of unknown function DUF285 VSVS12_03470 25cda47055e0f106c59b701db5921d5d 422 Pfam PF03382 Mycoplasma protein of unknown function, DUF285 234 341 7.3E-38 T 11-10-2018 IPR005046 Protein of unknown function DUF285 VSVS12_03470 25cda47055e0f106c59b701db5921d5d 422 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 148 162 6.3E-4 T 11-10-2018 IPR011889 Bacterial surface protein 26-residue repeat VSVS12_03470 25cda47055e0f106c59b701db5921d5d 422 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 337 360 6.4E-4 T 11-10-2018 IPR011889 Bacterial surface protein 26-residue repeat VSVS12_03470 25cda47055e0f106c59b701db5921d5d 422 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 187 211 2.2E-4 T 11-10-2018 IPR011889 Bacterial surface protein 26-residue repeat VSVS12_03470 25cda47055e0f106c59b701db5921d5d 422 TIGRFAM TIGR02167 Liste_lipo_26: bacterial surface protein 26-residue repeat 90 112 1.3E-5 T 11-10-2018 IPR011889 Bacterial surface protein 26-residue repeat VSVS12_00914 1985603b59441efa43f313a876158b24 373 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 20 367 2.6E-135 T 11-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VSVS12_00914 1985603b59441efa43f313a876158b24 373 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 324 348 - T 11-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VSVS12_00914 1985603b59441efa43f313a876158b24 373 Hamap MF_02079 Peptidoglycan glycosyltransferase MrdB [mrdB]. 16 369 28.224 T 11-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VSVS12_00914 1985603b59441efa43f313a876158b24 373 Pfam PF01098 Cell cycle protein 24 367 7.7E-112 T 11-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 VSVS12_01883 98b73d801696cfcd8917226482e7132e 361 Pfam PF07433 Protein of unknown function (DUF1513) 67 359 1.5E-109 T 11-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 VSVS12_01883 98b73d801696cfcd8917226482e7132e 361 SUPERFAMILY SSF50969 64 325 6.75E-13 T 11-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like VSVS12_01883 98b73d801696cfcd8917226482e7132e 361 PIRSF PIRSF028101 1 361 1.3E-149 T 11-10-2018 IPR008311 Uncharacterised conserved protein UCP028101 VSVS12_01883 98b73d801696cfcd8917226482e7132e 361 Gene3D G3DSA:2.130.10.10 25 213 9.7E-6 T 11-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 VSVS12_02328 82fc07c40b84506d9356e1c0f1a7171f 95 Gene3D G3DSA:1.10.10.10 2 95 3.1E-37 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_02328 82fc07c40b84506d9356e1c0f1a7171f 95 PIRSF PIRSF037266 1 94 1.7E-42 T 11-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 VSVS12_02328 82fc07c40b84506d9356e1c0f1a7171f 95 Pfam PF09904 Winged helix-turn helix 4 91 2.5E-38 T 11-10-2018 IPR017162 Uncharacterised conserved protein UCP037266 VSVS12_01822 3f81dba5c20e5ae9d193987980b740b3 377 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 11-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VSVS12_01822 3f81dba5c20e5ae9d193987980b740b3 377 Gene3D G3DSA:1.10.620.20 2 341 2.5E-145 T 11-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 VSVS12_01822 3f81dba5c20e5ae9d193987980b740b3 377 SUPERFAMILY SSF47240 3 341 4.24E-113 T 11-10-2018 IPR009078 Ferritin-like superfamily VSVS12_01822 3f81dba5c20e5ae9d193987980b740b3 377 Pfam PF00268 Ribonucleotide reductase, small chain 34 333 3.3E-49 T 11-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VSVS12_02790 82b2ecb72009aa2f24cf802a13d14316 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.588 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02790 82b2ecb72009aa2f24cf802a13d14316 71 Pfam PF01165 Ribosomal protein S21 4 56 4.3E-23 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02790 82b2ecb72009aa2f24cf802a13d14316 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 44 2.0E-10 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02790 82b2ecb72009aa2f24cf802a13d14316 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 7.2E-25 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02790 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.6E-16 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02790 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.6E-16 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02790 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.6E-16 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02790 82b2ecb72009aa2f24cf802a13d14316 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.6E-16 T 11-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02790 82b2ecb72009aa2f24cf802a13d14316 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 11-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_02790 82b2ecb72009aa2f24cf802a13d14316 71 Gene3D G3DSA:1.20.5.1150 16 54 1.4E-21 T 11-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00034 3b727cee88e27a737b47b36f308216b2 209 Pfam PF03942 DTW domain 13 196 1.8E-44 T 11-10-2018 IPR005636 DTW VSVS12_00034 3b727cee88e27a737b47b36f308216b2 209 SMART SM01144 10 203 1.4E-51 T 11-10-2018 IPR005636 DTW VSVS12_02137 ed0d7b8f621a8596f1d67f2132e60bcf 343 SUPERFAMILY SSF51735 121 241 1.67E-10 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_02137 ed0d7b8f621a8596f1d67f2132e60bcf 343 SUPERFAMILY SSF81324 5 131 1.02E-19 T 11-10-2018 VSVS12_02137 ed0d7b8f621a8596f1d67f2132e60bcf 343 Gene3D G3DSA:1.10.287.70 3 106 3.5E-15 T 11-10-2018 VSVS12_02137 ed0d7b8f621a8596f1d67f2132e60bcf 343 Pfam PF07885 Ion channel 26 103 4.7E-15 T 11-10-2018 IPR013099 Potassium channel domain VSVS12_02137 ed0d7b8f621a8596f1d67f2132e60bcf 343 Gene3D G3DSA:3.40.50.720 112 233 5.6E-11 T 11-10-2018 VSVS12_00737 a8169b68961dbc56674eba03b412e36e 121 Pfam PF07386 Protein of unknown function (DUF1499) 8 111 9.3E-23 T 11-10-2018 IPR010865 Protein of unknown function DUF1499 VSVS12_00737 a8169b68961dbc56674eba03b412e36e 121 PIRSF PIRSF026426 1 119 1.4E-41 T 11-10-2018 IPR010865 Protein of unknown function DUF1499 VSVS12_00756 34be6a701d2ced91c21175709835d1c5 296 Pfam PF03466 LysR substrate binding domain 97 288 1.7E-11 T 11-10-2018 IPR005119 LysR, substrate-binding VSVS12_00756 34be6a701d2ced91c21175709835d1c5 296 Gene3D G3DSA:3.40.190.290 95 290 3.5E-9 T 11-10-2018 VSVS12_00756 34be6a701d2ced91c21175709835d1c5 296 SUPERFAMILY SSF46785 2 85 4.77E-19 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_00756 34be6a701d2ced91c21175709835d1c5 296 SUPERFAMILY SSF53850 90 288 5.43E-24 T 11-10-2018 VSVS12_00756 34be6a701d2ced91c21175709835d1c5 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 6.8E-16 T 11-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 VSVS12_00756 34be6a701d2ced91c21175709835d1c5 296 Gene3D G3DSA:1.10.10.10 4 92 2.2E-18 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_04252 0e46aa85415a70c352e691b3a517e8a5 76 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 15 68 2.0E-21 T 11-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor VSVS12_04252 0e46aa85415a70c352e691b3a517e8a5 76 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 4 68 3.0E-31 T 11-10-2018 IPR024530 Putative quorum-sensing-regulated virulence factor VSVS12_01322 6eec757237ec6022eb6e363ac028e342 282 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 20 39 1.9E-5 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_01322 6eec757237ec6022eb6e363ac028e342 282 Pfam PF07963 Prokaryotic N-terminal methylation motif 18 40 5.7E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_00670 72a0812b9587609ee308f503144b8867 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 22 66 7.1E-11 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VSVS12_00670 72a0812b9587609ee308f503144b8867 204 SUPERFAMILY SSF46689 8 83 1.5E-14 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_00670 72a0812b9587609ee308f503144b8867 204 Gene3D G3DSA:1.10.357.10 1 204 4.6E-81 T 11-10-2018 VSVS12_00670 72a0812b9587609ee308f503144b8867 204 SUPERFAMILY SSF48498 91 197 5.19E-11 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VSVS12_00670 72a0812b9587609ee308f503144b8867 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 21 34 6.9E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VSVS12_00670 72a0812b9587609ee308f503144b8867 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 42 65 6.9E-5 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VSVS12_00294 99df5ae11ecf0d361ff171429de4b487 133 Pfam PF07963 Prokaryotic N-terminal methylation motif 17 42 1.7E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_00294 99df5ae11ecf0d361ff171429de4b487 133 SUPERFAMILY SSF54523 53 131 2.35E-19 T 11-10-2018 VSVS12_00294 99df5ae11ecf0d361ff171429de4b487 133 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 21 41 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_00294 99df5ae11ecf0d361ff171429de4b487 133 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 20 42 3.7E-8 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_00294 99df5ae11ecf0d361ff171429de4b487 133 Gene3D G3DSA:3.30.1300.30 46 133 8.6E-30 T 11-10-2018 VSVS12_00294 99df5ae11ecf0d361ff171429de4b487 133 TIGRFAM TIGR01707 gspI: type II secretion system protein I 22 119 5.1E-33 T 11-10-2018 IPR010052 Type II secretion system protein I GO:0008565|GO:0015627|GO:0015628 VSVS12_00294 99df5ae11ecf0d361ff171429de4b487 133 Pfam PF02501 Type II secretion system (T2SS), protein I 56 131 2.0E-18 T 11-10-2018 IPR003413 Type II secretion system protein I domain GO:0008565|GO:0015627|GO:0015628 VSVS12_03202 3d98c722a12173be9e3935d2ca8e0e15 199 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 52 150 2.3E-16 T 11-10-2018 IPR006521 Tail protein I VSVS12_03202 3d98c722a12173be9e3935d2ca8e0e15 199 Pfam PF09684 Phage tail protein (Tail_P2_I) 30 161 1.1E-28 T 11-10-2018 IPR006521 Tail protein I VSVS12_03625 a3a33c7a5c28907a383ed251e989346d 390 Gene3D G3DSA:3.60.21.10 1 275 1.2E-80 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like VSVS12_03625 a3a33c7a5c28907a383ed251e989346d 390 SUPERFAMILY SSF56300 1 330 1.97E-58 T 11-10-2018 VSVS12_03625 a3a33c7a5c28907a383ed251e989346d 390 Pfam PF00149 Calcineurin-like phosphoesterase 1 228 1.3E-15 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VSVS12_03625 a3a33c7a5c28907a383ed251e989346d 390 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 278 361 3.5E-8 T 11-10-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain VSVS12_03625 a3a33c7a5c28907a383ed251e989346d 390 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 254 8.4E-57 T 11-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 VSVS12_03577 8546d7be613a3e8d1c6a621a45c210f7 297 Gene3D G3DSA:1.20.1510.10 9 214 1.4E-21 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily VSVS12_03577 8546d7be613a3e8d1c6a621a45c210f7 297 Pfam PF01545 Cation efflux family 14 214 7.1E-34 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VSVS12_03577 8546d7be613a3e8d1c6a621a45c210f7 297 SUPERFAMILY SSF161111 9 214 1.96E-33 T 11-10-2018 IPR027469 Cation efflux transmembrane domain superfamily VSVS12_03577 8546d7be613a3e8d1c6a621a45c210f7 297 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 10 281 5.1E-25 T 11-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 VSVS12_03519 583bc1978d5b11f2b12b2300d08e49a2 161 Gene3D G3DSA:3.10.129.10 2 160 1.9E-43 T 11-10-2018 VSVS12_03519 583bc1978d5b11f2b12b2300d08e49a2 161 Pfam PF03061 Thioesterase superfamily 22 97 2.7E-16 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 VSVS12_03519 583bc1978d5b11f2b12b2300d08e49a2 161 SUPERFAMILY SSF54637 8 151 9.72E-41 T 11-10-2018 IPR029069 HotDog domain superfamily VSVS12_02606 6e193f2a42815a89ce6181bc0e35b098 175 SUPERFAMILY SSF55718 44 139 7.53E-21 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily VSVS12_02606 6e193f2a42815a89ce6181bc0e35b098 175 PIRSF PIRSF025550 1 174 5.0E-85 T 11-10-2018 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT VSVS12_02606 6e193f2a42815a89ce6181bc0e35b098 175 Gene3D G3DSA:3.30.1050.10 20 138 1.0E-6 T 11-10-2018 IPR036527 SCP2 sterol-binding domain superfamily VSVS12_02606 6e193f2a42815a89ce6181bc0e35b098 175 Pfam PF02036 SCP-2 sterol transfer family 42 134 2.3E-19 T 11-10-2018 IPR003033 SCP2 sterol-binding domain VSVS12_00787 6cb0f028afb4b45fba430cd714496709 241 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 1 240 36.912 T 11-10-2018 IPR017689 Outer membrane protein assembly factor BamD VSVS12_00787 6cb0f028afb4b45fba430cd714496709 241 SUPERFAMILY SSF48452 30 119 8.6E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_00787 6cb0f028afb4b45fba430cd714496709 241 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 8 239 3.5E-79 T 11-10-2018 IPR017689 Outer membrane protein assembly factor BamD VSVS12_00787 6cb0f028afb4b45fba430cd714496709 241 Gene3D G3DSA:1.25.40.10 28 240 6.0E-56 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_00787 6cb0f028afb4b45fba430cd714496709 241 Pfam PF13525 Outer membrane lipoprotein 26 233 3.4E-79 T 11-10-2018 IPR039565 Outer membrane lipoprotein BamD-like VSVS12_00119 733e344329b2a3bd28fb20845c0656b7 205 SUPERFAMILY SSF46626 5 105 1.26E-20 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VSVS12_00119 733e344329b2a3bd28fb20845c0656b7 205 Pfam PF00034 Cytochrome c 117 202 5.7E-9 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_00119 733e344329b2a3bd28fb20845c0656b7 205 Pfam PF00034 Cytochrome c 23 103 3.9E-9 T 11-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_00119 733e344329b2a3bd28fb20845c0656b7 205 SUPERFAMILY SSF46626 114 202 3.35E-20 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VSVS12_00119 733e344329b2a3bd28fb20845c0656b7 205 PIRSF PIRSF000005 1 205 6.7E-63 T 11-10-2018 IPR024167 Cytochrome c4-like GO:0005506|GO:0009055|GO:0020037|GO:0042597 VSVS12_00119 733e344329b2a3bd28fb20845c0656b7 205 Gene3D G3DSA:1.10.760.10 19 108 5.8E-24 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VSVS12_00119 733e344329b2a3bd28fb20845c0656b7 205 Gene3D G3DSA:1.10.760.10 109 205 3.1E-26 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VSVS12_03205 6c25b4736832c6ffe9bcb32b0838b802 645 Pfam PF10145 Phage-related minor tail protein 180 363 1.1E-18 T 11-10-2018 IPR010090 Phage tail tape measure protein VSVS12_03831 847a33ea8bb78a515d29d19f3f3d3545 248 Gene3D G3DSA:3.40.630.30 2 199 5.3E-30 T 11-10-2018 VSVS12_03831 847a33ea8bb78a515d29d19f3f3d3545 248 SUPERFAMILY SSF55729 12 143 7.56E-6 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_00411 d9df39c517f1f0ef1c061bcd66d7d9c3 447 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 447 43.442 T 11-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 VSVS12_00411 d9df39c517f1f0ef1c061bcd66d7d9c3 447 SMART SM01086 339 433 1.9E-19 T 11-10-2018 IPR019489 Clp ATPase, C-terminal VSVS12_00411 d9df39c517f1f0ef1c061bcd66d7d9c3 447 SMART SM00382 49 336 1.6E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_00411 d9df39c517f1f0ef1c061bcd66d7d9c3 447 Pfam PF07724 AAA domain (Cdc48 subfamily) 175 333 3.0E-43 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VSVS12_00411 d9df39c517f1f0ef1c061bcd66d7d9c3 447 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 136 2.0E-7 T 11-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 VSVS12_00411 d9df39c517f1f0ef1c061bcd66d7d9c3 447 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 339 408 1.3E-4 T 11-10-2018 IPR019489 Clp ATPase, C-terminal VSVS12_00411 d9df39c517f1f0ef1c061bcd66d7d9c3 447 Gene3D G3DSA:1.10.8.60 339 444 4.2E-40 T 11-10-2018 VSVS12_00411 d9df39c517f1f0ef1c061bcd66d7d9c3 447 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 447 3.5E-222 T 11-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 VSVS12_00411 d9df39c517f1f0ef1c061bcd66d7d9c3 447 SUPERFAMILY SSF52540 3 445 8.55E-94 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01669 726c8b67dbe8f8b3b8c909754ced73c9 1613 SUPERFAMILY SSF51735 945 1281 1.38E-27 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_01669 726c8b67dbe8f8b3b8c909754ced73c9 1613 Pfam PF05088 Bacterial NAD-glutamate dehydrogenase 76 1603 0.0 T 11-10-2018 IPR028971 NAD-glutamate dehydrogenase GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 VSVS12_01669 726c8b67dbe8f8b3b8c909754ced73c9 1613 SUPERFAMILY SSF53223 754 940 4.41E-26 T 11-10-2018 VSVS12_01669 726c8b67dbe8f8b3b8c909754ced73c9 1613 PIRSF PIRSF036761 1 1610 0.0 T 11-10-2018 IPR007780 NAD-glutamate dehydrogenase, bacteria GO:0004352|GO:0019551 KEGG: 00220+1.4.1.2|KEGG: 00250+1.4.1.2|KEGG: 00430+1.4.1.2|KEGG: 00910+1.4.1.2|MetaCyc: PWY-5022|MetaCyc: PWY-6728|MetaCyc: PWY-7126 VSVS12_02762 1d56ad9c70872f043de704b2a95c0bac 152 Pfam PF00114 Pilin (bacterial filament) 41 151 4.1E-5 T 11-10-2018 IPR001082 Fimbrial protein pilin GO:0007155|GO:0009289 VSVS12_02762 1d56ad9c70872f043de704b2a95c0bac 152 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 9 32 7.9E-11 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_02762 1d56ad9c70872f043de704b2a95c0bac 152 SUPERFAMILY SSF54523 12 135 3.3E-21 T 11-10-2018 VSVS12_02762 1d56ad9c70872f043de704b2a95c0bac 152 Gene3D G3DSA:3.30.700.10 12 151 5.1E-23 T 11-10-2018 VSVS12_02762 1d56ad9c70872f043de704b2a95c0bac 152 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_02762 1d56ad9c70872f043de704b2a95c0bac 152 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 31 1.3E-10 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_00692 17bdf18ebe4e467e5730e01a6b6a88ca 123 PIRSF PIRSF006287 1 123 2.7E-45 T 11-10-2018 IPR008249 Uncharacterised protein family UPF0231 VSVS12_00692 17bdf18ebe4e467e5730e01a6b6a88ca 123 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 122 28.801 T 11-10-2018 IPR008249 Uncharacterised protein family UPF0231 VSVS12_00692 17bdf18ebe4e467e5730e01a6b6a88ca 123 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 120 3.0E-47 T 11-10-2018 IPR008249 Uncharacterised protein family UPF0231 VSVS12_00692 17bdf18ebe4e467e5730e01a6b6a88ca 123 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 120 3.1E-39 T 11-10-2018 IPR008249 Uncharacterised protein family UPF0231 VSVS12_03547 decfdc70de938482fdd580cd3962fcb3 164 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 18 154 5.5E-15 T 11-10-2018 IPR009936 Protein of unknown function DUF1468 VSVS12_04491 b3b01b3670e85ce1a65890bc621053f4 89 TIGRFAM TIGR02116 toxin_Txe_YoeB: addiction module toxin, Txe/YoeB family 10 89 3.0E-34 T 11-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 VSVS12_04491 b3b01b3670e85ce1a65890bc621053f4 89 Pfam PF06769 YoeB-like toxin of bacterial type II toxin-antitoxin system 10 89 6.7E-42 T 11-10-2018 IPR009614 Toxin YoeB GO:0004519|GO:0006401 VSVS12_04491 b3b01b3670e85ce1a65890bc621053f4 89 SUPERFAMILY SSF143011 8 88 6.93E-27 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily VSVS12_04491 b3b01b3670e85ce1a65890bc621053f4 89 Gene3D G3DSA:3.30.2310.20 7 89 1.1E-39 T 11-10-2018 IPR035093 Toxin-antitoxin system, RelE/ParE toxin domain superfamily VSVS12_04269 8cac065532961538e924c501e1c7623e 204 Pfam PF00462 Glutaredoxin 109 174 9.0E-16 T 11-10-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 VSVS12_04269 8cac065532961538e924c501e1c7623e 204 SUPERFAMILY SSF52833 106 190 5.06E-18 T 11-10-2018 IPR036249 Thioredoxin-like superfamily VSVS12_04269 8cac065532961538e924c501e1c7623e 204 PRINTS PR00160 Glutaredoxin signature 171 184 1.2E-7 T 11-10-2018 IPR014025 Glutaredoxin subgroup VSVS12_04269 8cac065532961538e924c501e1c7623e 204 PRINTS PR00160 Glutaredoxin signature 108 126 1.2E-7 T 11-10-2018 IPR014025 Glutaredoxin subgroup VSVS12_04269 8cac065532961538e924c501e1c7623e 204 PRINTS PR00160 Glutaredoxin signature 157 170 1.2E-7 T 11-10-2018 IPR014025 Glutaredoxin subgroup VSVS12_04269 8cac065532961538e924c501e1c7623e 204 ProSitePatterns PS00195 Glutaredoxin active site. 110 126 - T 11-10-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 VSVS12_04269 8cac065532961538e924c501e1c7623e 204 Gene3D G3DSA:3.40.30.10 109 185 7.6E-19 T 11-10-2018 VSVS12_02180 dc09ac5441679b9a37286a1f5228e0a0 1485 Gene3D G3DSA:1.20.58.850 621 831 2.8E-129 T 11-10-2018 VSVS12_02180 dc09ac5441679b9a37286a1f5228e0a0 1485 Pfam PF04310 MukB N-terminal 2 227 1.7E-121 T 11-10-2018 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 VSVS12_02180 dc09ac5441679b9a37286a1f5228e0a0 1485 Gene3D G3DSA:1.20.1060.30 668 779 2.8E-129 T 11-10-2018 VSVS12_02180 dc09ac5441679b9a37286a1f5228e0a0 1485 Pfam PF16330 MukB hinge domain 647 811 8.5E-70 T 11-10-2018 IPR032520 MukB, hinge domain VSVS12_02180 dc09ac5441679b9a37286a1f5228e0a0 1485 PIRSF PIRSF005246 1 1485 0.0 T 11-10-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 VSVS12_02180 dc09ac5441679b9a37286a1f5228e0a0 1485 Gene3D G3DSA:3.40.1140.10 1383 1469 4.6E-38 T 11-10-2018 VSVS12_02180 dc09ac5441679b9a37286a1f5228e0a0 1485 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1337 1425 5.8E-14 T 11-10-2018 VSVS12_02180 dc09ac5441679b9a37286a1f5228e0a0 1485 SUPERFAMILY SSF52540 26 224 7.03E-23 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02180 dc09ac5441679b9a37286a1f5228e0a0 1485 Gene3D G3DSA:3.40.1140.10 1 227 7.8E-98 T 11-10-2018 VSVS12_02180 dc09ac5441679b9a37286a1f5228e0a0 1485 SUPERFAMILY SSF52540 21 1433 5.84E-5 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02180 dc09ac5441679b9a37286a1f5228e0a0 1485 Gene3D G3DSA:1.20.58.850 583 852 2.8E-129 T 11-10-2018 VSVS12_03841 9aede509822576afbec147b3896f5cd3 218 SUPERFAMILY SSF46785 90 174 1.36E-26 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_03841 9aede509822576afbec147b3896f5cd3 218 Gene3D G3DSA:1.10.10.10 95 175 1.1E-27 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_03841 9aede509822576afbec147b3896f5cd3 218 Hamap MF_01584 UPF0502 protein YceH [yceH]. 5 218 34.206 T 11-10-2018 IPR007432 Protein of unknown function DUF480 VSVS12_03841 9aede509822576afbec147b3896f5cd3 218 Pfam PF04337 Protein of unknown function, DUF480 5 158 2.1E-62 T 11-10-2018 IPR007432 Protein of unknown function DUF480 VSVS12_03841 9aede509822576afbec147b3896f5cd3 218 SUPERFAMILY SSF46785 3 84 2.04E-29 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_03841 9aede509822576afbec147b3896f5cd3 218 Gene3D G3DSA:1.10.10.10 1 90 4.6E-34 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_03335 715df828fc7ca81cc255aefaf2351fb4 568 SUPERFAMILY SSF51445 51 539 4.81E-80 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily VSVS12_03335 715df828fc7ca81cc255aefaf2351fb4 568 Pfam PF00128 Alpha amylase, catalytic domain 81 349 5.3E-17 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VSVS12_03335 715df828fc7ca81cc255aefaf2351fb4 568 SMART SM00642 72 491 1.8E-6 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VSVS12_03335 715df828fc7ca81cc255aefaf2351fb4 568 Gene3D G3DSA:3.20.20.80 56 470 1.5E-153 T 11-10-2018 VSVS12_03335 715df828fc7ca81cc255aefaf2351fb4 568 Gene3D G3DSA:3.90.400.10 138 212 1.5E-153 T 11-10-2018 VSVS12_03335 715df828fc7ca81cc255aefaf2351fb4 568 PIRSF PIRSF003059 3 568 1.9E-205 T 11-10-2018 IPR016377 Sucrose/Glucosylglycerate phosphorylase-related VSVS12_00874 416bd77e5ed0305dc7a794422da0ad45 169 Gene3D G3DSA:3.30.910.20 25 169 1.2E-35 T 11-10-2018 IPR024930 Skp domain superfamily VSVS12_00874 416bd77e5ed0305dc7a794422da0ad45 169 Pfam PF03938 Outer membrane protein (OmpH-like) 14 168 4.0E-27 T 11-10-2018 IPR005632 Chaperone protein Skp GO:0051082 VSVS12_00874 416bd77e5ed0305dc7a794422da0ad45 169 PIRSF PIRSF002094 1 169 2.6E-41 T 11-10-2018 IPR005632 Chaperone protein Skp GO:0051082 VSVS12_00874 416bd77e5ed0305dc7a794422da0ad45 169 SMART SM00935 15 169 9.3E-43 T 11-10-2018 IPR005632 Chaperone protein Skp GO:0051082 VSVS12_00874 416bd77e5ed0305dc7a794422da0ad45 169 SUPERFAMILY SSF111384 26 169 1.83E-32 T 11-10-2018 VSVS12_01746 a5403aa207915cd8a41df53c1dc646ee 218 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 12 214 41.733 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VSVS12_01746 a5403aa207915cd8a41df53c1dc646ee 218 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 19 209 3.6E-79 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VSVS12_01746 a5403aa207915cd8a41df53c1dc646ee 218 SUPERFAMILY SSF55821 8 212 2.75E-81 T 11-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily VSVS12_01746 a5403aa207915cd8a41df53c1dc646ee 218 Gene3D G3DSA:3.90.870.10 1 217 7.4E-87 T 11-10-2018 VSVS12_01746 a5403aa207915cd8a41df53c1dc646ee 218 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 14 210 2.2E-77 T 11-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 VSVS12_02704 173e938cb5175edcaad3dc748e70cdf4 78 Pfam PF01693 Caulimovirus viroplasmin 6 48 1.6E-11 T 11-10-2018 IPR011320 Ribonuclease H1, N-terminal VSVS12_02704 173e938cb5175edcaad3dc748e70cdf4 78 SUPERFAMILY SSF55658 5 49 2.25E-12 T 11-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal VSVS12_02704 173e938cb5175edcaad3dc748e70cdf4 78 Gene3D G3DSA:3.40.970.10 2 54 2.2E-12 T 11-10-2018 IPR037056 Ribonuclease H1, N-terminal domain superfamily VSVS12_02155 4f1b850edaa7bfd3991e7d749ec87022 394 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 16 186 4.6E-71 T 11-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal VSVS12_02155 4f1b850edaa7bfd3991e7d749ec87022 394 SUPERFAMILY SSF48695 13 187 5.1E-59 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily VSVS12_02155 4f1b850edaa7bfd3991e7d749ec87022 394 Gene3D G3DSA:1.10.3820.10 15 192 1.5E-37 T 11-10-2018 IPR038266 NapC/NirT cytochrome c superfamily VSVS12_02155 4f1b850edaa7bfd3991e7d749ec87022 394 TIGRFAM TIGR02162 torC: trimethylamine-N-oxide reductase c-type cytochrome TorC 7 394 1.5E-185 T 11-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 VSVS12_02155 4f1b850edaa7bfd3991e7d749ec87022 394 PIRSF PIRSF000014 1 394 2.8E-159 T 11-10-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 VSVS12_01270 ba20ef8bbd536757ae6cb1638133c673 260 Pfam PF03609 PTS system sorbose-specific iic component 5 236 3.3E-72 T 11-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 VSVS12_01175 d386b724007523401f71776fea9c5e2f 351 Gene3D G3DSA:1.10.3470.10 7 351 5.6E-100 T 11-10-2018 IPR037294 ABC transporter, BtuC-like VSVS12_01175 d386b724007523401f71776fea9c5e2f 351 Pfam PF01032 FecCD transport family 21 346 3.2E-89 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VSVS12_01175 d386b724007523401f71776fea9c5e2f 351 SUPERFAMILY SSF81345 10 346 3.66E-82 T 11-10-2018 IPR037294 ABC transporter, BtuC-like VSVS12_02321 24bf2c383321f0be874dee8de27f8451 323 Pfam PF03916 Polysulphide reductase, NrfD 7 322 6.3E-73 T 11-10-2018 IPR005614 NrfD family VSVS12_02321 24bf2c383321f0be874dee8de27f8451 323 TIGRFAM TIGR03148 cyt_nit_nrfD: cytochrome c nitrite reductase, NrfD subunit 6 323 4.0E-140 T 11-10-2018 IPR017566 NrfD VSVS12_00206 fddefc32c68cfa248070729091e3014d 252 Gene3D G3DSA:3.40.190.10 99 208 1.9E-28 T 11-10-2018 VSVS12_00206 fddefc32c68cfa248070729091e3014d 252 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 50 63 - T 11-10-2018 IPR018313 Solute-binding protein family 3, conserved site VSVS12_00206 fddefc32c68cfa248070729091e3014d 252 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 29 247 2.3E-57 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VSVS12_00206 fddefc32c68cfa248070729091e3014d 252 SUPERFAMILY SSF53850 1 250 3.2E-57 T 11-10-2018 VSVS12_00206 fddefc32c68cfa248070729091e3014d 252 SMART SM00062 28 249 4.2E-76 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VSVS12_02031 a09a8656bd819b75498e3e38775111f9 566 Gene3D G3DSA:1.10.3720.10 296 547 6.3E-17 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_02031 a09a8656bd819b75498e3e38775111f9 566 SUPERFAMILY SSF161098 4 272 7.63E-21 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_02031 a09a8656bd819b75498e3e38775111f9 566 SUPERFAMILY SSF161098 298 538 3.71E-22 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_02031 a09a8656bd819b75498e3e38775111f9 566 Gene3D G3DSA:1.10.3720.10 44 277 1.0E-16 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_03100 5597a9a402a995a4dd2a776b4c3abaa6 158 Gene3D G3DSA:2.40.128.640 50 158 7.6E-30 T 11-10-2018 VSVS12_03100 5597a9a402a995a4dd2a776b4c3abaa6 158 Pfam PF04170 NlpE N-terminal domain 63 146 1.5E-19 T 11-10-2018 IPR007298 Copper resistance lipoprotein NlpE VSVS12_01258 45c9dc3c104378cc20723a7e0092e993 386 SUPERFAMILY SSF52151 25 270 4.45E-31 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VSVS12_01258 45c9dc3c104378cc20723a7e0092e993 386 Pfam PF01734 Patatin-like phospholipase 29 198 2.5E-15 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 VSVS12_01258 45c9dc3c104378cc20723a7e0092e993 386 Gene3D G3DSA:3.40.1090.10 15 143 1.2E-8 T 11-10-2018 VSVS12_01354 240906ff6a43e823d68a08cf7c331532 289 SUPERFAMILY SSF56112 31 269 1.75E-32 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily VSVS12_01354 240906ff6a43e823d68a08cf7c331532 289 Pfam PF01636 Phosphotransferase enzyme family 32 233 6.9E-15 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase VSVS12_01354 240906ff6a43e823d68a08cf7c331532 289 Gene3D G3DSA:3.90.1200.10 103 284 1.2E-13 T 11-10-2018 VSVS12_01376 db45adc17d35fd4c6f4a6c81a63e5c58 246 Pfam PF13353 4Fe-4S single cluster domain 16 150 1.1E-20 T 11-10-2018 VSVS12_01376 db45adc17d35fd4c6f4a6c81a63e5c58 246 PIRSF PIRSF000371 1 48 2.8E-11 T 11-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 VSVS12_01376 db45adc17d35fd4c6f4a6c81a63e5c58 246 PIRSF PIRSF000371 44 245 5.4E-46 T 11-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 VSVS12_01376 db45adc17d35fd4c6f4a6c81a63e5c58 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 239 7.3E-108 T 11-10-2018 IPR012838 Pyruvate formate-lyase 1 activating enzyme GO:0043365|GO:0055114 VSVS12_01376 db45adc17d35fd4c6f4a6c81a63e5c58 246 Gene3D G3DSA:3.20.20.70 2 246 1.3E-104 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_01376 db45adc17d35fd4c6f4a6c81a63e5c58 246 Pfam PF04055 Radical SAM superfamily 24 178 5.7E-33 T 11-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 VSVS12_01376 db45adc17d35fd4c6f4a6c81a63e5c58 246 SUPERFAMILY SSF102114 23 220 6.15E-30 T 11-10-2018 VSVS12_01376 db45adc17d35fd4c6f4a6c81a63e5c58 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 11-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 VSVS12_03078 3afd8dac7c9c6feeda58a736913d069b 309 ProSitePatterns PS01053 Arginase family signature. 229 250 - T 11-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 VSVS12_03078 3afd8dac7c9c6feeda58a736913d069b 309 Gene3D G3DSA:3.40.800.10 1 309 5.9E-104 T 11-10-2018 VSVS12_03078 3afd8dac7c9c6feeda58a736913d069b 309 PIRSF PIRSF036979 12 305 1.7E-97 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 VSVS12_03078 3afd8dac7c9c6feeda58a736913d069b 309 SUPERFAMILY SSF52768 12 303 2.52E-93 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily VSVS12_03078 3afd8dac7c9c6feeda58a736913d069b 309 Pfam PF00491 Arginase family 33 298 1.4E-88 T 11-10-2018 IPR006035 Ureohydrolase GO:0046872 VSVS12_03078 3afd8dac7c9c6feeda58a736913d069b 309 TIGRFAM TIGR01230 agmatinase: agmatinase 24 299 1.1E-91 T 11-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 VSVS12_00574 37c84c33abd5136924ee81d2a7c0ff07 185 Pfam PF02325 YGGT family 10 77 2.2E-19 T 11-10-2018 IPR003425 CCB3/YggT GO:0016020 VSVS12_00574 37c84c33abd5136924ee81d2a7c0ff07 185 Pfam PF02325 YGGT family 109 173 7.8E-20 T 11-10-2018 IPR003425 CCB3/YggT GO:0016020 VSVS12_02204 d552b123f28a16247a23eb3502950c1e 257 Gene3D G3DSA:3.60.21.10 11 248 4.9E-19 T 11-10-2018 IPR029052 Metallo-dependent phosphatase-like VSVS12_02204 d552b123f28a16247a23eb3502950c1e 257 Pfam PF00149 Calcineurin-like phosphoesterase 12 210 4.0E-9 T 11-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 VSVS12_02204 d552b123f28a16247a23eb3502950c1e 257 SUPERFAMILY SSF56300 9 232 3.8E-32 T 11-10-2018 VSVS12_02204 d552b123f28a16247a23eb3502950c1e 257 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 14 243 1.0E-103 T 11-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 VSVS12_02204 d552b123f28a16247a23eb3502950c1e 257 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 253 110.987 T 11-10-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 VSVS12_01361 c5bc105d869fd0190d8f028221f2807f 402 Pfam PF02687 FtsX-like permease family 296 395 5.5E-13 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VSVS12_01361 c5bc105d869fd0190d8f028221f2807f 402 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 5 402 1.7E-130 T 11-10-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 VSVS12_01361 c5bc105d869fd0190d8f028221f2807f 402 Pfam PF12704 MacB-like periplasmic core domain 29 204 4.4E-10 T 11-10-2018 IPR025857 MacB-like periplasmic core domain VSVS12_03095 1e52874d7d644435bf6edd937cd569bc 97 Pfam PF00367 phosphotransferase system, EIIB 26 57 1.2E-10 T 11-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 VSVS12_03095 1e52874d7d644435bf6edd937cd569bc 97 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 20 82 1.5E-13 T 11-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 VSVS12_03095 1e52874d7d644435bf6edd937cd569bc 97 SUPERFAMILY SSF55604 23 95 1.96E-18 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VSVS12_03095 1e52874d7d644435bf6edd937cd569bc 97 Gene3D G3DSA:3.30.1360.60 18 97 7.1E-23 T 11-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 VSVS12_04017 5a23e539c78862106993f578ec534e2c 115 Pfam PF11225 Protein of unknown function (DUF3024) 59 114 1.1E-21 T 11-10-2018 IPR021388 Bacteriophage 933W, L0084 VSVS12_04062 5a23e539c78862106993f578ec534e2c 115 Pfam PF11225 Protein of unknown function (DUF3024) 59 114 1.1E-21 T 11-10-2018 IPR021388 Bacteriophage 933W, L0084 VSVS12_04094 5a23e539c78862106993f578ec534e2c 115 Pfam PF11225 Protein of unknown function (DUF3024) 59 114 1.1E-21 T 11-10-2018 IPR021388 Bacteriophage 933W, L0084 VSVS12_00204 a12ad9ef800312691b3d68f8f3bc9fb5 245 SUPERFAMILY SSF52540 1 238 3.86E-76 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00204 a12ad9ef800312691b3d68f8f3bc9fb5 245 SMART SM00382 26 216 5.3E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_00204 a12ad9ef800312691b3d68f8f3bc9fb5 245 PIRSF PIRSF039085 1 244 4.8E-106 T 11-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 VSVS12_00204 a12ad9ef800312691b3d68f8f3bc9fb5 245 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_00204 a12ad9ef800312691b3d68f8f3bc9fb5 245 Gene3D G3DSA:3.40.50.300 1 245 6.9E-77 T 11-10-2018 VSVS12_00204 a12ad9ef800312691b3d68f8f3bc9fb5 245 Pfam PF00005 ABC transporter 17 168 2.7E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_04172 873a84a7fef6852acf3de7cd2d21d605 318 Gene3D G3DSA:1.10.10.10 3 71 2.1E-9 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_04172 873a84a7fef6852acf3de7cd2d21d605 318 SUPERFAMILY SSF46785 19 70 9.05E-7 T 11-10-2018 IPR036390 Winged helix DNA-binding domain superfamily VSVS12_04172 873a84a7fef6852acf3de7cd2d21d605 318 Pfam PF07729 FCD domain 162 285 6.1E-8 T 11-10-2018 IPR011711 GntR, C-terminal VSVS12_04172 873a84a7fef6852acf3de7cd2d21d605 318 SMART SM00895 162 286 6.2E-8 T 11-10-2018 IPR011711 GntR, C-terminal VSVS12_04172 873a84a7fef6852acf3de7cd2d21d605 318 SUPERFAMILY SSF48008 160 293 8.89E-13 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VSVS12_04172 873a84a7fef6852acf3de7cd2d21d605 318 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 70 1.2E-9 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VSVS12_04172 873a84a7fef6852acf3de7cd2d21d605 318 SMART SM00345 17 71 6.4E-4 T 11-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 VSVS12_04172 873a84a7fef6852acf3de7cd2d21d605 318 Gene3D G3DSA:1.20.120.530 156 300 9.4E-11 T 11-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal VSVS12_03781 3cd53f8c8020201d16dfb5fb51e4506e 236 SMART SM00796 5 207 1.6E-63 T 11-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D VSVS12_03781 3cd53f8c8020201d16dfb5fb51e4506e 236 SUPERFAMILY SSF160467 6 99 3.01E-13 T 11-10-2018 VSVS12_03781 3cd53f8c8020201d16dfb5fb51e4506e 236 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 6 206 1.0E-54 T 11-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D VSVS12_03781 3cd53f8c8020201d16dfb5fb51e4506e 236 SUPERFAMILY SSF50891 94 222 1.06E-35 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily VSVS12_03781 3cd53f8c8020201d16dfb5fb51e4506e 236 Gene3D G3DSA:3.30.1360.40 1 95 2.3E-12 T 11-10-2018 VSVS12_03781 3cd53f8c8020201d16dfb5fb51e4506e 236 Gene3D G3DSA:2.40.100.10 96 230 1.2E-43 T 11-10-2018 IPR029000 Cyclophilin-like domain superfamily VSVS12_02770 258ec30c4b2040c5042eba31107c4764 249 Gene3D G3DSA:3.40.1280.10 1 160 1.6E-67 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VSVS12_02770 258ec30c4b2040c5042eba31107c4764 249 Gene3D G3DSA:1.10.1270.20 161 249 6.3E-34 T 11-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VSVS12_02770 258ec30c4b2040c5042eba31107c4764 249 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 249 117.738 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VSVS12_02770 258ec30c4b2040c5042eba31107c4764 249 SUPERFAMILY SSF75217 1 244 7.85E-102 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases VSVS12_02770 258ec30c4b2040c5042eba31107c4764 249 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 6.7E-69 T 11-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VSVS12_02770 258ec30c4b2040c5042eba31107c4764 249 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 234 1.3E-108 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VSVS12_02770 258ec30c4b2040c5042eba31107c4764 249 PIRSF PIRSF000386 1 248 4.1E-101 T 11-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 VSVS12_03102 588cc4d0fb4cc8615b6e480c12fa6e32 779 Gene3D G3DSA:1.25.40.10 313 438 4.5E-7 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_03102 588cc4d0fb4cc8615b6e480c12fa6e32 779 SUPERFAMILY SSF48452 338 473 5.93E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_02870 c28a982b5b77dfac113efd4434e5e21b 100 Pfam PF10795 Protein of unknown function (DUF2607) 10 97 3.3E-21 T 11-10-2018 IPR019731 Protein of unknown function DUF2607 VSVS12_04217 46260aca242d2aafb2629837df833142 530 SUPERFAMILY SSF141868 272 516 7.59E-71 T 11-10-2018 IPR035919 EAL domain superfamily VSVS12_04217 46260aca242d2aafb2629837df833142 530 Pfam PF12792 CSS motif domain associated with EAL 53 241 5.1E-15 T 11-10-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain VSVS12_04217 46260aca242d2aafb2629837df833142 530 Gene3D G3DSA:3.20.20.450 265 521 1.5E-71 T 11-10-2018 IPR035919 EAL domain superfamily VSVS12_04217 46260aca242d2aafb2629837df833142 530 SMART SM00052 265 512 6.1E-71 T 11-10-2018 IPR001633 EAL domain VSVS12_04217 46260aca242d2aafb2629837df833142 530 Pfam PF00563 EAL domain 273 507 2.5E-61 T 11-10-2018 IPR001633 EAL domain VSVS12_03730 a7a39dbf24f7e9d3303ab6dfc272fec6 997 SUPERFAMILY SSF56349 374 630 6.77E-14 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VSVS12_03730 a7a39dbf24f7e9d3303ab6dfc272fec6 997 Pfam PF00589 Phage integrase family 486 630 1.2E-5 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VSVS12_01501 f23ac64b97e8013cf1dfc3a93a96fec2 294 Pfam PF01764 Lipase (class 3) 100 227 1.1E-25 T 11-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 VSVS12_01501 f23ac64b97e8013cf1dfc3a93a96fec2 294 Gene3D G3DSA:3.40.50.1820 37 262 2.0E-44 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold VSVS12_01501 f23ac64b97e8013cf1dfc3a93a96fec2 294 SUPERFAMILY SSF53474 38 242 2.32E-35 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold VSVS12_03413 17c7b902556c26b62ba226b6903b286d 174 SUPERFAMILY SSF75217 3 142 2.06E-25 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases VSVS12_03413 17c7b902556c26b62ba226b6903b286d 174 Gene3D G3DSA:3.40.1280.10 7 150 1.8E-17 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VSVS12_03413 17c7b902556c26b62ba226b6903b286d 174 Pfam PF00588 SpoU rRNA Methylase family 7 139 1.5E-18 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VSVS12_02089 b30df61a5e3364ccd1f53125b1ee96ff 690 SUPERFAMILY SSF52540 198 665 1.49E-8 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02089 b30df61a5e3364ccd1f53125b1ee96ff 690 Pfam PF06733 DEAD_2 193 261 9.7E-6 T 11-10-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 VSVS12_02089 b30df61a5e3364ccd1f53125b1ee96ff 690 Gene3D G3DSA:3.40.50.300 496 688 1.7E-34 T 11-10-2018 VSVS12_02089 b30df61a5e3364ccd1f53125b1ee96ff 690 SUPERFAMILY SSF52540 14 658 4.41E-15 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02089 b30df61a5e3364ccd1f53125b1ee96ff 690 SMART SM00491 535 671 3.7E-29 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VSVS12_02089 b30df61a5e3364ccd1f53125b1ee96ff 690 Gene3D G3DSA:3.40.50.300 25 305 9.7E-41 T 11-10-2018 VSVS12_02089 b30df61a5e3364ccd1f53125b1ee96ff 690 Pfam PF13307 Helicase C-terminal domain 526 684 1.8E-37 T 11-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 VSVS12_02089 b30df61a5e3364ccd1f53125b1ee96ff 690 Hamap MF_02205 ATP-dependent DNA helicase DinG [dinG]. 33 690 36.481 T 11-10-2018 IPR039000 ATP-dependent DNA helicase DinG GO:0004003 VSVS12_02780 c974e71e47659f9a67cd5ee94d654802 364 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 10 358 27.331 T 11-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VSVS12_02780 c974e71e47659f9a67cd5ee94d654802 364 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 189 353 7.6E-19 T 11-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VSVS12_02780 c974e71e47659f9a67cd5ee94d654802 364 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 13 175 9.4E-40 T 11-10-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 VSVS12_02780 c974e71e47659f9a67cd5ee94d654802 364 SUPERFAMILY SSF55120 10 354 1.29E-89 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VSVS12_02780 c974e71e47659f9a67cd5ee94d654802 364 Gene3D G3DSA:3.30.2350.20 22 353 2.5E-98 T 11-10-2018 VSVS12_02780 c974e71e47659f9a67cd5ee94d654802 364 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 82 95 - T 11-10-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 VSVS12_02780 c974e71e47659f9a67cd5ee94d654802 364 Gene3D G3DSA:3.30.2340.10 174 318 2.5E-98 T 11-10-2018 VSVS12_00451 7de3be275a43c7304fc0ee67bf7d2996 485 Pfam PF00171 Aldehyde dehydrogenase family 9 458 2.6E-118 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VSVS12_00451 7de3be275a43c7304fc0ee67bf7d2996 485 SUPERFAMILY SSF53720 2 449 1.31E-120 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VSVS12_00451 7de3be275a43c7304fc0ee67bf7d2996 485 Gene3D G3DSA:3.40.309.10 247 436 1.3E-138 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VSVS12_00451 7de3be275a43c7304fc0ee67bf7d2996 485 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VSVS12_00451 7de3be275a43c7304fc0ee67bf7d2996 485 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 1 485 55.807 T 11-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 VSVS12_00451 7de3be275a43c7304fc0ee67bf7d2996 485 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 3 484 4.0E-224 T 11-10-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 VSVS12_00451 7de3be275a43c7304fc0ee67bf7d2996 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 242 249 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VSVS12_00451 7de3be275a43c7304fc0ee67bf7d2996 485 Gene3D G3DSA:3.40.605.10 7 448 1.3E-138 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VSVS12_02101 8834885ca9737671d994196fe18d44bf 142 Pfam PF04138 GtrA-like protein 11 137 2.9E-20 T 11-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 VSVS12_03017 2fdc2efe50bc7c4431db090c044dcbfd 38 Gene3D G3DSA:3.50.50.60 1 35 2.2E-5 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_03017 2fdc2efe50bc7c4431db090c044dcbfd 38 SUPERFAMILY SSF51905 3 28 8.46E-6 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_01045 052f0e8307a36e0385ca167fa8e416f8 340 Gene3D G3DSA:3.30.310.170 220 340 3.1E-41 T 11-10-2018 VSVS12_01045 052f0e8307a36e0385ca167fa8e416f8 340 Gene3D G3DSA:3.30.530.50 96 205 8.4E-14 T 11-10-2018 VSVS12_01045 052f0e8307a36e0385ca167fa8e416f8 340 PIRSF PIRSF026343 4 339 2.6E-117 T 11-10-2018 IPR014524 Outer membrane protein assembly factor BamC VSVS12_01045 052f0e8307a36e0385ca167fa8e416f8 340 Pfam PF06804 NlpB/DapX lipoprotein 35 335 1.5E-94 T 11-10-2018 IPR010653 NlpB/DapX lipoprotein VSVS12_01045 052f0e8307a36e0385ca167fa8e416f8 340 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 4 337 32.333 T 11-10-2018 IPR014524 Outer membrane protein assembly factor BamC VSVS12_04243 0c62fee2760f29caa104b6aa26740f30 289 Pfam PF01734 Patatin-like phospholipase 6 73 5.3E-6 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 VSVS12_04243 0c62fee2760f29caa104b6aa26740f30 289 Gene3D G3DSA:3.40.1090.10 1 93 1.2E-8 T 11-10-2018 VSVS12_04243 0c62fee2760f29caa104b6aa26740f30 289 SUPERFAMILY SSF52151 3 241 6.54E-31 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VSVS12_01126 690f9f1ab1ab3727a93494e8e189d17f 286 SUPERFAMILY SSF53223 1 122 8.73E-40 T 11-10-2018 VSVS12_01126 690f9f1ab1ab3727a93494e8e189d17f 286 Gene3D G3DSA:3.40.50.10860 8 276 2.5E-108 T 11-10-2018 VSVS12_01126 690f9f1ab1ab3727a93494e8e189d17f 286 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 37.921 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VSVS12_01126 690f9f1ab1ab3727a93494e8e189d17f 286 SUPERFAMILY SSF51735 123 280 7.52E-52 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_01126 690f9f1ab1ab3727a93494e8e189d17f 286 Gene3D G3DSA:3.40.50.720 6 259 2.5E-108 T 11-10-2018 VSVS12_01126 690f9f1ab1ab3727a93494e8e189d17f 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 3.1E-87 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VSVS12_01126 690f9f1ab1ab3727a93494e8e189d17f 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 3.1E-87 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VSVS12_01126 690f9f1ab1ab3727a93494e8e189d17f 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 3.1E-87 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VSVS12_01126 690f9f1ab1ab3727a93494e8e189d17f 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 3.1E-87 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VSVS12_01126 690f9f1ab1ab3727a93494e8e189d17f 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 3.1E-87 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VSVS12_01126 690f9f1ab1ab3727a93494e8e189d17f 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 3.1E-87 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VSVS12_01126 690f9f1ab1ab3727a93494e8e189d17f 286 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 3.1E-87 T 11-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VSVS12_01126 690f9f1ab1ab3727a93494e8e189d17f 286 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 281 2.5E-69 T 11-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VSVS12_01126 690f9f1ab1ab3727a93494e8e189d17f 286 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 6 121 1.7E-38 T 11-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VSVS12_01126 690f9f1ab1ab3727a93494e8e189d17f 286 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 11-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VSVS12_01126 690f9f1ab1ab3727a93494e8e189d17f 286 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 11-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 VSVS12_04499 04083335d72c099f92671dc38abd99bb 52 PRINTS PR00281 Hok/Gef cell toxic protein family signature 26 48 1.1E-7 T 11-10-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 VSVS12_04499 04083335d72c099f92671dc38abd99bb 52 PRINTS PR00281 Hok/Gef cell toxic protein family signature 6 24 1.1E-7 T 11-10-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 VSVS12_04499 04083335d72c099f92671dc38abd99bb 52 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 1 43 1.0E-6 T 11-10-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 VSVS12_04499 04083335d72c099f92671dc38abd99bb 52 Pfam PF01848 Hok/gef family 7 43 9.3E-14 T 11-10-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 VSVS12_04499 04083335d72c099f92671dc38abd99bb 52 ProSitePatterns PS00556 Hok/gef family cell toxic proteins signature. 11 30 - T 11-10-2018 IPR018084 Hok/gef cell toxic protein, conserved site GO:0016020 VSVS12_01524 02734dbe80fa6566715bef2ba2e65b94 641 SUPERFAMILY SSF51338 58 587 7.92E-12 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VSVS12_01524 02734dbe80fa6566715bef2ba2e65b94 641 Gene3D G3DSA:3.20.20.140 102 549 1.1E-84 T 11-10-2018 VSVS12_01524 02734dbe80fa6566715bef2ba2e65b94 641 Gene3D G3DSA:2.30.40.10 49 566 1.1E-84 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VSVS12_01524 02734dbe80fa6566715bef2ba2e65b94 641 Gene3D G3DSA:3.10.310.70 120 249 1.1E-84 T 11-10-2018 VSVS12_01524 02734dbe80fa6566715bef2ba2e65b94 641 Pfam PF07969 Amidohydrolase family 95 587 6.4E-47 T 11-10-2018 IPR013108 Amidohydrolase 3 VSVS12_01524 02734dbe80fa6566715bef2ba2e65b94 641 SUPERFAMILY SSF51556 101 550 6.28E-23 T 11-10-2018 IPR032466 Metal-dependent hydrolase VSVS12_01571 f18a918ab324e1820350a1dba491fb34 222 Pfam PF13488 Glycine zipper 38 86 1.3E-9 T 11-10-2018 IPR039567 Glycine zipper domain VSVS12_01571 f18a918ab324e1820350a1dba491fb34 222 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 181 200 1.4E-7 T 11-10-2018 VSVS12_01571 f18a918ab324e1820350a1dba491fb34 222 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 163 180 1.4E-7 T 11-10-2018 VSVS12_01571 f18a918ab324e1820350a1dba491fb34 222 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 201 221 1.4E-7 T 11-10-2018 VSVS12_01571 f18a918ab324e1820350a1dba491fb34 222 SUPERFAMILY SSF103088 106 221 8.24E-37 T 11-10-2018 IPR036737 OmpA-like domain superfamily VSVS12_01571 f18a918ab324e1820350a1dba491fb34 222 Gene3D G3DSA:3.30.1330.60 80 222 1.6E-43 T 11-10-2018 IPR036737 OmpA-like domain superfamily VSVS12_01571 f18a918ab324e1820350a1dba491fb34 222 Pfam PF00691 OmpA family 118 212 3.7E-21 T 11-10-2018 IPR006665 OmpA-like domain VSVS12_01571 f18a918ab324e1820350a1dba491fb34 222 PRINTS PR01021 OMPA domain signature 163 179 9.6E-12 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VSVS12_01571 f18a918ab324e1820350a1dba491fb34 222 PRINTS PR01021 OMPA domain signature 148 163 9.6E-12 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VSVS12_01571 f18a918ab324e1820350a1dba491fb34 222 PRINTS PR01021 OMPA domain signature 118 140 9.6E-12 T 11-10-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 VSVS12_00974 cdddd4134284687428c03adaa39eaa89 138 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 11-10-2018 IPR019776 Flagellar basal body rod protein, conserved site VSVS12_00974 cdddd4134284687428c03adaa39eaa89 138 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 138 7.1E-52 T 11-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 VSVS12_00974 cdddd4134284687428c03adaa39eaa89 138 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 92 136 4.2E-12 T 11-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain VSVS12_00974 cdddd4134284687428c03adaa39eaa89 138 Pfam PF00460 Flagella basal body rod protein 7 32 2.6E-7 T 11-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 VSVS12_00293 0396a8e18a7834a539b1df8010b206d8 197 Pfam PF12019 Type II transport protein GspH 41 180 8.3E-5 T 11-10-2018 IPR022346 General secretion pathway, GspH GO:0008565|GO:0015627|GO:0015628 VSVS12_00293 0396a8e18a7834a539b1df8010b206d8 197 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 26 2.1E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_00293 0396a8e18a7834a539b1df8010b206d8 197 PRINTS PR00885 Bacterial general secretion pathway protein H signature 17 31 9.8E-17 T 11-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VSVS12_00293 0396a8e18a7834a539b1df8010b206d8 197 PRINTS PR00885 Bacterial general secretion pathway protein H signature 143 158 9.8E-17 T 11-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VSVS12_00293 0396a8e18a7834a539b1df8010b206d8 197 PRINTS PR00885 Bacterial general secretion pathway protein H signature 2 16 9.8E-17 T 11-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VSVS12_00293 0396a8e18a7834a539b1df8010b206d8 197 TIGRFAM TIGR01708 typeII_sec_gspH: type II secretion system protein H 4 180 4.8E-15 T 11-10-2018 IPR002416 Type II secretion system protein H GO:0008565|GO:0015627|GO:0015628 VSVS12_00293 0396a8e18a7834a539b1df8010b206d8 197 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 26 8.2E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_00293 0396a8e18a7834a539b1df8010b206d8 197 Gene3D G3DSA:3.55.40.10 36 111 1.6E-18 T 11-10-2018 VSVS12_00293 0396a8e18a7834a539b1df8010b206d8 197 Gene3D G3DSA:3.55.40.10 112 193 4.5E-23 T 11-10-2018 VSVS12_00293 0396a8e18a7834a539b1df8010b206d8 197 SUPERFAMILY SSF54523 7 86 7.14E-12 T 11-10-2018 VSVS12_00293 0396a8e18a7834a539b1df8010b206d8 197 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_00400 0e52612d89ac6d3bf2d9e10f00811f82 539 Gene3D G3DSA:1.10.443.10 343 516 1.6E-6 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VSVS12_00400 0e52612d89ac6d3bf2d9e10f00811f82 539 SUPERFAMILY SSF56349 347 503 9.12E-7 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VSVS12_02127 7315ed63035c9494a2494c03e6a0e47a 316 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 256 269 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VSVS12_02127 7315ed63035c9494a2494c03e6a0e47a 316 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 47 71 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VSVS12_02127 7315ed63035c9494a2494c03e6a0e47a 316 SUPERFAMILY SSF53613 12 311 6.39E-50 T 11-10-2018 IPR029056 Ribokinase-like VSVS12_02127 7315ed63035c9494a2494c03e6a0e47a 316 Pfam PF00294 pfkB family carbohydrate kinase 13 300 8.0E-43 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB VSVS12_02127 7315ed63035c9494a2494c03e6a0e47a 316 Gene3D G3DSA:3.40.1190.20 2 314 3.6E-54 T 11-10-2018 IPR029056 Ribokinase-like VSVS12_02049 12abcefaad218dc4c4572e8d48b6ce67 333 Gene3D G3DSA:3.40.50.300 1 176 1.7E-58 T 11-10-2018 VSVS12_02049 12abcefaad218dc4c4572e8d48b6ce67 333 Gene3D G3DSA:1.10.8.60 177 259 4.0E-27 T 11-10-2018 VSVS12_02049 12abcefaad218dc4c4572e8d48b6ce67 333 Pfam PF02954 Bacterial regulatory protein, Fis family 288 321 2.4E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VSVS12_02049 12abcefaad218dc4c4572e8d48b6ce67 333 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 310 330 5.6E-9 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VSVS12_02049 12abcefaad218dc4c4572e8d48b6ce67 333 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 293 310 5.6E-9 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VSVS12_02049 12abcefaad218dc4c4572e8d48b6ce67 333 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 5 327 6.7E-160 T 11-10-2018 IPR014317 Transcription activator PspF VSVS12_02049 12abcefaad218dc4c4572e8d48b6ce67 333 Pfam PF00158 Sigma-54 interaction domain 5 168 1.0E-56 T 11-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 VSVS12_02049 12abcefaad218dc4c4572e8d48b6ce67 333 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 219 228 - T 11-10-2018 IPR025944 Sigma-54 interaction domain, conserved site VSVS12_02049 12abcefaad218dc4c4572e8d48b6ce67 333 Gene3D G3DSA:1.10.10.60 260 332 5.5E-8 T 11-10-2018 VSVS12_02049 12abcefaad218dc4c4572e8d48b6ce67 333 SMART SM00382 25 177 8.1E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_02049 12abcefaad218dc4c4572e8d48b6ce67 333 SUPERFAMILY SSF52540 4 247 4.24E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02049 12abcefaad218dc4c4572e8d48b6ce67 333 SUPERFAMILY SSF46689 219 329 4.35E-8 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_02049 12abcefaad218dc4c4572e8d48b6ce67 333 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 91 106 - T 11-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 VSVS12_02076 0eadd85d40c98c3ef29c048c81452edf 268 Pfam PF07103 Protein of unknown function (DUF1365) 6 237 2.8E-67 T 11-10-2018 IPR010775 Protein of unknown function DUF1365 VSVS12_03704 d099e6cd3e3b12878359b8eebf2618c2 70 SUPERFAMILY SSF47413 2 67 1.08E-10 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VSVS12_03704 d099e6cd3e3b12878359b8eebf2618c2 70 Gene3D G3DSA:1.10.260.40 1 69 8.3E-12 T 11-10-2018 VSVS12_03704 d099e6cd3e3b12878359b8eebf2618c2 70 SMART SM00530 5 61 1.5E-4 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VSVS12_03704 d099e6cd3e3b12878359b8eebf2618c2 70 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 5 67 1.0E-19 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VSVS12_02556 9911e32d255c0463a5ecc0aea3beaec1 305 SUPERFAMILY SSF54211 134 278 2.12E-52 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VSVS12_02556 9911e32d255c0463a5ecc0aea3beaec1 305 Gene3D G3DSA:3.30.1700.10 129 305 8.0E-72 T 11-10-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 VSVS12_02556 9911e32d255c0463a5ecc0aea3beaec1 305 SUPERFAMILY SSF54211 3 125 5.46E-42 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VSVS12_02556 9911e32d255c0463a5ecc0aea3beaec1 305 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 46.851 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 VSVS12_02556 9911e32d255c0463a5ecc0aea3beaec1 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 7.6E-109 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 VSVS12_02556 9911e32d255c0463a5ecc0aea3beaec1 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 299 1.7E-144 T 11-10-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 VSVS12_02556 9911e32d255c0463a5ecc0aea3beaec1 305 Gene3D G3DSA:3.30.230.20 1 128 5.0E-51 T 11-10-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108 VSVS12_00015 e5917c78ad19a9bf70bb498f0395ad61 396 SUPERFAMILY SSF47364 92 171 1.7E-22 T 11-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 VSVS12_00015 e5917c78ad19a9bf70bb498f0395ad61 396 Pfam PF00448 SRP54-type protein, GTPase domain 192 392 1.0E-77 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VSVS12_00015 e5917c78ad19a9bf70bb498f0395ad61 396 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 366 379 - T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VSVS12_00015 e5917c78ad19a9bf70bb498f0395ad61 396 Gene3D G3DSA:3.40.50.300 188 381 7.1E-117 T 11-10-2018 VSVS12_00015 e5917c78ad19a9bf70bb498f0395ad61 396 SUPERFAMILY SSF52540 190 393 3.08E-54 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00015 e5917c78ad19a9bf70bb498f0395ad61 396 SMART SM00962 192 393 3.5E-123 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VSVS12_00015 e5917c78ad19a9bf70bb498f0395ad61 396 SMART SM00963 97 177 1.5E-26 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VSVS12_00015 e5917c78ad19a9bf70bb498f0395ad61 396 Pfam PF02881 SRP54-type protein, helical bundle domain 112 173 1.3E-14 T 11-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VSVS12_00015 e5917c78ad19a9bf70bb498f0395ad61 396 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 120 393 64.72 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 VSVS12_00015 e5917c78ad19a9bf70bb498f0395ad61 396 SMART SM00382 191 371 4.1E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_00015 e5917c78ad19a9bf70bb498f0395ad61 396 Gene3D G3DSA:1.20.120.140 94 391 7.1E-117 T 11-10-2018 VSVS12_00015 e5917c78ad19a9bf70bb498f0395ad61 396 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 121 392 1.4E-115 T 11-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 VSVS12_02175 1cd6c27ec51d7126cad5046bee0c4c73 323 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 13 322 53.813 T 11-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 VSVS12_02175 1cd6c27ec51d7126cad5046bee0c4c73 323 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 12 321 3.5E-147 T 11-10-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 VSVS12_02175 1cd6c27ec51d7126cad5046bee0c4c73 323 Pfam PF08003 Protein of unknown function (DUF1698) 7 322 7.0E-172 T 11-10-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like VSVS12_02175 1cd6c27ec51d7126cad5046bee0c4c73 323 SUPERFAMILY SSF53335 91 323 7.62E-34 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_02175 1cd6c27ec51d7126cad5046bee0c4c73 323 Gene3D G3DSA:3.40.50.150 65 293 9.3E-22 T 11-10-2018 VSVS12_00704 02c71d9bf09be4fcedf0c986de7d432d 572 Gene3D G3DSA:2.60.40.10 1 93 9.4E-24 T 11-10-2018 IPR013783 Immunoglobulin-like fold VSVS12_00704 02c71d9bf09be4fcedf0c986de7d432d 572 Pfam PF00759 Glycosyl hydrolase family 9 98 504 8.4E-27 T 11-10-2018 IPR001701 Glycoside hydrolase family 9 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 VSVS12_00704 02c71d9bf09be4fcedf0c986de7d432d 572 SUPERFAMILY SSF81296 3 90 2.24E-15 T 11-10-2018 IPR014756 Immunoglobulin E-set VSVS12_00704 02c71d9bf09be4fcedf0c986de7d432d 572 Pfam PF02927 Cellulase N-terminal ig-like domain 5 83 1.1E-12 T 11-10-2018 IPR004197 Cellulase, Ig-like domain GO:0005975|GO:0008810 VSVS12_00704 02c71d9bf09be4fcedf0c986de7d432d 572 Gene3D G3DSA:1.50.10.10 94 572 3.9E-224 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 VSVS12_00704 02c71d9bf09be4fcedf0c986de7d432d 572 SUPERFAMILY SSF48208 77 565 1.15E-93 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 VSVS12_03533 622dc6a1374a510e70246cb359d7e4d6 308 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 78 176 5.9E-6 T 11-10-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0016788 VSVS12_03533 622dc6a1374a510e70246cb359d7e4d6 308 Gene3D G3DSA:3.40.630.10 3 308 7.3E-118 T 11-10-2018 VSVS12_03533 622dc6a1374a510e70246cb359d7e4d6 308 SUPERFAMILY SSF53187 36 279 8.27E-36 T 11-10-2018 VSVS12_03273 be0689e8c0a9874bd974c1ed771342df 310 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 266 292 - T 11-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 VSVS12_03273 be0689e8c0a9874bd974c1ed771342df 310 Pfam PF01148 Cytidylyltransferase family 42 307 1.8E-69 T 11-10-2018 VSVS12_02864 cf82c8d4d550fd2f408fd3521c887a15 120 Pfam PF10973 Protein of unknown function (DUF2799) 34 116 1.3E-18 T 11-10-2018 IPR021242 Protein of unknown function DUF2799 VSVS12_00985 1f62a083b8add98daee036a91e01bf0c 378 Gene3D G3DSA:3.30.70.2120 174 276 1.8E-76 T 11-10-2018 VSVS12_00985 1f62a083b8add98daee036a91e01bf0c 378 Pfam PF07196 Flagellin hook IN motif 204 250 5.1E-10 T 11-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VSVS12_00985 1f62a083b8add98daee036a91e01bf0c 378 PRINTS PR00207 Flagellin signature 76 95 9.7E-28 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VSVS12_00985 1f62a083b8add98daee036a91e01bf0c 378 PRINTS PR00207 Flagellin signature 37 54 9.7E-28 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VSVS12_00985 1f62a083b8add98daee036a91e01bf0c 378 PRINTS PR00207 Flagellin signature 111 134 9.7E-28 T 11-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 VSVS12_00985 1f62a083b8add98daee036a91e01bf0c 378 SUPERFAMILY SSF64518 1 377 8.24E-97 T 11-10-2018 VSVS12_00985 1f62a083b8add98daee036a91e01bf0c 378 Gene3D G3DSA:1.10.8.410 329 377 8.7E-20 T 11-10-2018 VSVS12_00985 1f62a083b8add98daee036a91e01bf0c 378 Gene3D G3DSA:1.20.1330.10 44 328 1.8E-76 T 11-10-2018 VSVS12_00985 1f62a083b8add98daee036a91e01bf0c 378 Pfam PF00700 Bacterial flagellin C-terminal helical region 293 377 6.1E-25 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VSVS12_00985 1f62a083b8add98daee036a91e01bf0c 378 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 2.1E-42 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VSVS12_01333 07f3813c53f31bfa43ee33d6ef4a901a 83 Pfam PF11280 Protein of unknown function (DUF3081) 5 79 1.6E-25 T 11-10-2018 IPR021432 Protein of unknown function DUF3081 VSVS12_03645 85cd2f9ad0858137492d5fff2c023ae7 58 Pfam PF11140 Protein of unknown function (DUF2913) 8 57 3.4E-7 T 11-10-2018 IPR021316 Protein of unknown function DUF2913 VSVS12_01836 6e78c19c32faf7d0974fa212a8cacdc8 223 Pfam PF00005 ABC transporter 21 167 2.3E-31 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_01836 6e78c19c32faf7d0974fa212a8cacdc8 223 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_01836 6e78c19c32faf7d0974fa212a8cacdc8 223 Gene3D G3DSA:3.40.50.300 1 223 1.3E-57 T 11-10-2018 VSVS12_01836 6e78c19c32faf7d0974fa212a8cacdc8 223 SMART SM00382 30 218 1.7E-11 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_01836 6e78c19c32faf7d0974fa212a8cacdc8 223 SUPERFAMILY SSF52540 1 217 4.31E-59 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03930 4e0a63363264fe050520232e78e6287d 264 SMART SM00052 13 257 6.3E-12 T 11-10-2018 IPR001633 EAL domain VSVS12_03930 4e0a63363264fe050520232e78e6287d 264 Pfam PF00563 EAL domain 20 252 2.0E-40 T 11-10-2018 IPR001633 EAL domain VSVS12_03930 4e0a63363264fe050520232e78e6287d 264 SUPERFAMILY SSF141868 21 257 1.83E-43 T 11-10-2018 IPR035919 EAL domain superfamily VSVS12_03930 4e0a63363264fe050520232e78e6287d 264 Gene3D G3DSA:3.20.20.450 15 262 1.6E-44 T 11-10-2018 IPR035919 EAL domain superfamily VSVS12_03593 52afa9996f833202cbb945df0185939b 118 PIRSF PIRSF028299 1 118 2.8E-16 T 11-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 VSVS12_03593 52afa9996f833202cbb945df0185939b 118 Pfam PF11777 Protein of unknown function (DUF3316) 3 112 1.0E-10 T 11-10-2018 IPR016879 Uncharacterised conserved protein UCP028299 VSVS12_04553 2a144341214b075bc373f8503eb425d7 595 Gene3D G3DSA:3.30.110.130 41 120 4.6E-14 T 11-10-2018 VSVS12_04553 2a144341214b075bc373f8503eb425d7 595 Pfam PF12563 Hemolytic toxin N terminal 17 176 2.1E-23 T 11-10-2018 IPR022220 Hemolytic toxin, N-terminal VSVS12_04553 2a144341214b075bc373f8503eb425d7 595 SMART SM00458 472 590 0.0037 T 11-10-2018 IPR000772 Ricin B, lectin domain VSVS12_04553 2a144341214b075bc373f8503eb425d7 595 Pfam PF07968 Leukocidin/Hemolysin toxin family 214 465 1.9E-24 T 11-10-2018 IPR016183 Leukocidin/Hemolysin toxin GO:0005576|GO:0051715 VSVS12_04553 2a144341214b075bc373f8503eb425d7 595 SUPERFAMILY SSF50370 479 568 7.72E-12 T 11-10-2018 IPR035992 Ricin B-like lectins VSVS12_04553 2a144341214b075bc373f8503eb425d7 595 Gene3D G3DSA:2.70.240.20 158 573 1.2E-134 T 11-10-2018 VSVS12_04553 2a144341214b075bc373f8503eb425d7 595 Gene3D G3DSA:3.30.70.2270 296 337 1.2E-134 T 11-10-2018 VSVS12_00196 7ecad187947465ef5e40db150334ae95 210 Gene3D G3DSA:3.40.50.150 4 209 8.1E-67 T 11-10-2018 VSVS12_00196 7ecad187947465ef5e40db150334ae95 210 Pfam PF02527 rRNA small subunit methyltransferase G 24 204 4.7E-63 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VSVS12_00196 7ecad187947465ef5e40db150334ae95 210 PIRSF PIRSF003078 2 210 1.9E-59 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VSVS12_00196 7ecad187947465ef5e40db150334ae95 210 SUPERFAMILY SSF53335 6 208 1.27E-40 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_00196 7ecad187947465ef5e40db150334ae95 210 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 29 207 4.0E-59 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VSVS12_00196 7ecad187947465ef5e40db150334ae95 210 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 16 205 28.204 T 11-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 VSVS12_02660 c525a5f9428d96cdad6b7f4535d47391 158 Pfam PF04073 Aminoacyl-tRNA editing domain 31 148 2.0E-26 T 11-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 VSVS12_02660 c525a5f9428d96cdad6b7f4535d47391 158 SUPERFAMILY SSF55826 7 157 4.06E-35 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VSVS12_02660 c525a5f9428d96cdad6b7f4535d47391 158 Gene3D G3DSA:3.90.960.10 2 158 9.8E-39 T 11-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 VSVS12_00759 61cec6f4692af94c26e9fbb107c0a33c 520 Pfam PF03023 MviN-like protein 30 486 1.4E-144 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VSVS12_00759 61cec6f4692af94c26e9fbb107c0a33c 520 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 5 511 7.7E-139 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VSVS12_00759 61cec6f4692af94c26e9fbb107c0a33c 520 PRINTS PR01806 Virulence factor MviN signature 418 435 6.5E-76 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VSVS12_00759 61cec6f4692af94c26e9fbb107c0a33c 520 PRINTS PR01806 Virulence factor MviN signature 166 187 6.5E-76 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VSVS12_00759 61cec6f4692af94c26e9fbb107c0a33c 520 PRINTS PR01806 Virulence factor MviN signature 54 70 6.5E-76 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VSVS12_00759 61cec6f4692af94c26e9fbb107c0a33c 520 PRINTS PR01806 Virulence factor MviN signature 35 54 6.5E-76 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VSVS12_00759 61cec6f4692af94c26e9fbb107c0a33c 520 PRINTS PR01806 Virulence factor MviN signature 142 166 6.5E-76 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VSVS12_00759 61cec6f4692af94c26e9fbb107c0a33c 520 PRINTS PR01806 Virulence factor MviN signature 268 294 6.5E-76 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VSVS12_00759 61cec6f4692af94c26e9fbb107c0a33c 520 PRINTS PR01806 Virulence factor MviN signature 366 385 6.5E-76 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VSVS12_00759 61cec6f4692af94c26e9fbb107c0a33c 520 PIRSF PIRSF002869 1 518 4.3E-150 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VSVS12_00759 61cec6f4692af94c26e9fbb107c0a33c 520 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 5 476 19.727 T 11-10-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ VSVS12_00369 100d9a01cfadf2ea758e3be8acfb48b0 105 Pfam PF01340 Met Apo-repressor, MetJ 3 99 1.6E-59 T 11-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 VSVS12_00369 100d9a01cfadf2ea758e3be8acfb48b0 105 Gene3D G3DSA:1.10.140.10 2 105 3.0E-56 T 11-10-2018 IPR023453 Methionine repressor MetJ domain superfamily VSVS12_00369 100d9a01cfadf2ea758e3be8acfb48b0 105 SUPERFAMILY SSF47598 3 103 6.67E-57 T 11-10-2018 IPR010985 Ribbon-helix-helix GO:0006355 VSVS12_00369 100d9a01cfadf2ea758e3be8acfb48b0 105 Hamap MF_00744 Met repressor [metJ]. 1 105 34.94 T 11-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 VSVS12_00369 100d9a01cfadf2ea758e3be8acfb48b0 105 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 1.0E-48 T 11-10-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 VSVS12_00595 33875442a5a1ff571ff3c7369f9f7011 284 SUPERFAMILY SSF52540 4 269 5.58E-64 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00595 33875442a5a1ff571ff3c7369f9f7011 284 Gene3D G3DSA:3.40.50.300 2 276 2.2E-101 T 11-10-2018 VSVS12_00595 33875442a5a1ff571ff3c7369f9f7011 284 SMART SM00382 24 145 0.0026 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_00595 33875442a5a1ff571ff3c7369f9f7011 284 Pfam PF00437 Type II/IV secretion system protein 4 163 4.1E-57 T 11-10-2018 IPR001482 Type II/IV secretion system protein VSVS12_00595 33875442a5a1ff571ff3c7369f9f7011 284 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 91 105 - T 11-10-2018 IPR001482 Type II/IV secretion system protein VSVS12_03550 29f60959213d511e67e6d438347630b5 404 SUPERFAMILY SSF103032 184 305 5.36E-12 T 11-10-2018 IPR035948 YwqG-like superfamily VSVS12_03550 29f60959213d511e67e6d438347630b5 404 Gene3D G3DSA:2.30.320.10 147 388 2.2E-12 T 11-10-2018 IPR035948 YwqG-like superfamily VSVS12_03550 29f60959213d511e67e6d438347630b5 404 Pfam PF09234 Domain of unknown function (DUF1963) 189 290 1.2E-10 T 11-10-2018 IPR015315 Protein of unknown function DUF1963 VSVS12_00846 5dc8f515e022169cd68036c1abfb10e0 429 Pfam PF00860 Permease family 18 391 1.6E-52 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 VSVS12_00846 5dc8f515e022169cd68036c1abfb10e0 429 PIRSF PIRSF005353 1 429 4.8E-185 T 11-10-2018 IPR026033 Purine permease PbuG-like VSVS12_04595 281a52b7e033f4cb0b11bb51051ea05a 203 Pfam PF00239 Resolvase, N terminal domain 3 157 3.9E-30 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VSVS12_04595 281a52b7e033f4cb0b11bb51051ea05a 203 Gene3D G3DSA:3.40.50.1390 1 167 1.7E-32 T 11-10-2018 VSVS12_04595 281a52b7e033f4cb0b11bb51051ea05a 203 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 VSVS12_04595 281a52b7e033f4cb0b11bb51051ea05a 203 ProSitePatterns PS00398 Site-specific recombinases signature 2. 62 74 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 VSVS12_04595 281a52b7e033f4cb0b11bb51051ea05a 203 SUPERFAMILY SSF53041 1 157 6.15E-33 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 VSVS12_04595 281a52b7e033f4cb0b11bb51051ea05a 203 SMART SM00857 3 157 3.5E-41 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VSVS12_02122 7ce1f1d15f5f5c7c7a445e4f7a1ed6dd 429 Pfam PF01618 MotA/TolQ/ExbB proton channel family 307 411 1.4E-23 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VSVS12_02122 7ce1f1d15f5f5c7c7a445e4f7a1ed6dd 429 PIRSF PIRSF037714 1 429 2.9E-99 T 11-10-2018 IPR017270 Putative MotA/TolQ/ExbB family protein VSVS12_00018 265a2cc21e05322ad93ceefa1c167156 194 Pfam PF01914 MarC family integral membrane protein 3 192 2.1E-53 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VSVS12_00018 265a2cc21e05322ad93ceefa1c167156 194 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 6 189 3.2E-29 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VSVS12_03566 29fa74054b91f410d1dbd2d6566af21b 373 Gene3D G3DSA:2.160.10.10 251 361 1.8E-10 T 11-10-2018 VSVS12_03566 29fa74054b91f410d1dbd2d6566af21b 373 Gene3D G3DSA:3.90.550.10 1 250 2.1E-63 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VSVS12_03566 29fa74054b91f410d1dbd2d6566af21b 373 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 283 313 5.8E-6 T 11-10-2018 IPR001451 Hexapeptide repeat VSVS12_03566 29fa74054b91f410d1dbd2d6566af21b 373 SUPERFAMILY SSF53448 1 323 3.29E-67 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VSVS12_03566 29fa74054b91f410d1dbd2d6566af21b 373 Pfam PF00483 Nucleotidyl transferase 2 246 4.2E-52 T 11-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 VSVS12_01217 5393017c5dd91974f6d941068ff02b46 338 PIRSF PIRSF001220 1 336 4.4E-96 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 VSVS12_01217 5393017c5dd91974f6d941068ff02b46 338 SUPERFAMILY SSF53774 4 337 7.59E-114 T 11-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 VSVS12_01217 5393017c5dd91974f6d941068ff02b46 338 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 4 337 3.7E-118 T 11-10-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 VSVS12_01217 5393017c5dd91974f6d941068ff02b46 338 Gene3D G3DSA:3.40.50.1170 1 210 6.5E-93 T 11-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 VSVS12_01217 5393017c5dd91974f6d941068ff02b46 338 Gene3D G3DSA:3.40.50.40 211 338 2.6E-45 T 11-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 VSVS12_01217 5393017c5dd91974f6d941068ff02b46 338 Pfam PF00710 Asparaginase, N-terminal 5 193 1.3E-67 T 11-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 VSVS12_01217 5393017c5dd91974f6d941068ff02b46 338 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 11-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 VSVS12_01217 5393017c5dd91974f6d941068ff02b46 338 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 85 95 - T 11-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 VSVS12_01217 5393017c5dd91974f6d941068ff02b46 338 SMART SM00870 5 325 1.0E-143 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 VSVS12_01217 5393017c5dd91974f6d941068ff02b46 338 PIRSF PIRSF500176 2 334 8.5E-110 T 11-10-2018 VSVS12_01217 5393017c5dd91974f6d941068ff02b46 338 PRINTS PR00139 Asparaginase/glutaminase family signature 84 102 8.5E-17 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 VSVS12_01217 5393017c5dd91974f6d941068ff02b46 338 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 8.5E-17 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 VSVS12_01217 5393017c5dd91974f6d941068ff02b46 338 PRINTS PR00139 Asparaginase/glutaminase family signature 262 280 8.5E-17 T 11-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 VSVS12_01875 8c9fd38de51af956878ba518cf3e2714 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 423 2.3E-107 T 11-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VSVS12_01875 8c9fd38de51af956878ba518cf3e2714 427 PIRSF PIRSF006066 1 426 2.9E-76 T 11-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 VSVS12_01875 8c9fd38de51af956878ba518cf3e2714 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 423 7.7E-102 T 11-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VSVS12_01226 12472a9f72f697d9dca68f32cba28171 185 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 12 161 6.3E-37 T 11-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 VSVS12_01226 12472a9f72f697d9dca68f32cba28171 185 PIRSF PIRSF004982 5 185 2.1E-56 T 11-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 VSVS12_01226 12472a9f72f697d9dca68f32cba28171 185 Pfam PF03843 Outer membrane lipoprotein Slp family 21 162 4.8E-44 T 11-10-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 VSVS12_00933 d4cc489e46b28e3e76ac576efee01cd5 250 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 12 250 27.383 T 11-10-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 VSVS12_00933 d4cc489e46b28e3e76ac576efee01cd5 250 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 18 234 3.2E-39 T 11-10-2018 VSVS12_03302 acf80d9b0c328dba33ae7359cf1d6994 217 Gene3D G3DSA:3.40.225.10 1 215 2.2E-71 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily VSVS12_03302 acf80d9b0c328dba33ae7359cf1d6994 217 SUPERFAMILY SSF53639 2 213 4.91E-60 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily VSVS12_03302 acf80d9b0c328dba33ae7359cf1d6994 217 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 10 185 2.4E-46 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal VSVS12_03302 acf80d9b0c328dba33ae7359cf1d6994 217 SMART SM01007 8 185 8.5E-60 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal VSVS12_02291 b250311bc00e55922a2d538cdab1fb8d 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 302 323 4.9E-40 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VSVS12_02291 b250311bc00e55922a2d538cdab1fb8d 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 228 245 4.9E-40 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VSVS12_02291 b250311bc00e55922a2d538cdab1fb8d 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 10 32 4.9E-40 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VSVS12_02291 b250311bc00e55922a2d538cdab1fb8d 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 208 226 4.9E-40 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VSVS12_02291 b250311bc00e55922a2d538cdab1fb8d 376 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 272 287 4.9E-40 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VSVS12_02291 b250311bc00e55922a2d538cdab1fb8d 376 SUPERFAMILY SSF160544 250 355 6.54E-40 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal VSVS12_02291 b250311bc00e55922a2d538cdab1fb8d 376 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 7 353 2.5E-133 T 11-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 VSVS12_02291 b250311bc00e55922a2d538cdab1fb8d 376 Pfam PF01312 FlhB HrpN YscU SpaS Family 7 347 6.9E-121 T 11-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 VSVS12_02291 b250311bc00e55922a2d538cdab1fb8d 376 Gene3D G3DSA:3.40.1690.10 218 359 5.0E-57 T 11-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal VSVS12_01247 e87d7df4d8720ac8784e115454e8f430 320 SUPERFAMILY SSF48019 211 319 2.38E-17 T 11-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 VSVS12_01247 e87d7df4d8720ac8784e115454e8f430 320 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 12 197 1.7E-58 T 11-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VSVS12_01247 e87d7df4d8720ac8784e115454e8f430 320 Gene3D G3DSA:1.20.272.10 208 319 8.2E-9 T 11-10-2018 VSVS12_01247 e87d7df4d8720ac8784e115454e8f430 320 Pfam PF13177 DNA polymerase III, delta subunit 12 163 1.5E-41 T 11-10-2018 VSVS12_01247 e87d7df4d8720ac8784e115454e8f430 320 Gene3D G3DSA:3.40.50.300 3 165 9.4E-47 T 11-10-2018 VSVS12_01247 e87d7df4d8720ac8784e115454e8f430 320 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 210 315 1.8E-22 T 11-10-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 VSVS12_01247 e87d7df4d8720ac8784e115454e8f430 320 SUPERFAMILY SSF52540 5 193 1.06E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00707 dd31eadaa5aad1d33deec9998be3caf8 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 122 299 1.6E-19 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VSVS12_00707 dd31eadaa5aad1d33deec9998be3caf8 341 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 11 43 1.4E-5 T 11-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VSVS12_00707 dd31eadaa5aad1d33deec9998be3caf8 341 Gene3D G3DSA:1.10.3720.10 93 303 5.2E-17 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_00707 dd31eadaa5aad1d33deec9998be3caf8 341 SUPERFAMILY SSF161098 96 286 6.67E-20 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_03592 b8c26ad9fbf0ba69041625b4c89dc4dd 76 Pfam PF11661 Protein of unknown function (DUF2986) 1 43 9.3E-21 T 11-10-2018 IPR021677 Protein of unknown function DUF2986 VSVS12_02670 d72ceb25209d477a522deb003415b621 574 SUPERFAMILY SSF52518 373 567 1.88E-69 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold VSVS12_02670 d72ceb25209d477a522deb003415b621 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 396 545 3.4E-51 T 11-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 VSVS12_02670 d72ceb25209d477a522deb003415b621 574 Gene3D G3DSA:3.40.50.1220 192 362 1.2E-60 T 11-10-2018 VSVS12_02670 d72ceb25209d477a522deb003415b621 574 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 5 569 8.2E-274 T 11-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 VSVS12_02670 d72ceb25209d477a522deb003415b621 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 198 331 2.8E-46 T 11-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 VSVS12_02670 d72ceb25209d477a522deb003415b621 574 Gene3D G3DSA:3.40.50.970 366 574 1.7E-67 T 11-10-2018 VSVS12_02670 d72ceb25209d477a522deb003415b621 574 Gene3D G3DSA:3.40.50.970 1 183 4.0E-74 T 11-10-2018 VSVS12_02670 d72ceb25209d477a522deb003415b621 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 173 1.9E-59 T 11-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 VSVS12_02670 d72ceb25209d477a522deb003415b621 574 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 433 452 - T 11-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 VSVS12_02670 d72ceb25209d477a522deb003415b621 574 SUPERFAMILY SSF52518 2 181 4.63E-65 T 11-10-2018 IPR029061 Thiamin diphosphate-binding fold VSVS12_02670 d72ceb25209d477a522deb003415b621 574 SUPERFAMILY SSF52467 191 364 3.64E-63 T 11-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily VSVS12_02205 cb2dd34928cf0b6793f0b42e27cabd96 415 PIRSF PIRSF003180 11 415 2.0E-153 T 11-10-2018 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing VSVS12_02205 cb2dd34928cf0b6793f0b42e27cabd96 415 SUPERFAMILY SSF141868 15 202 2.75E-26 T 11-10-2018 IPR035919 EAL domain superfamily VSVS12_02205 cb2dd34928cf0b6793f0b42e27cabd96 415 SUPERFAMILY SSF109604 191 411 3.77E-39 T 11-10-2018 VSVS12_02205 cb2dd34928cf0b6793f0b42e27cabd96 415 Gene3D G3DSA:1.10.3210.10 206 386 4.4E-22 T 11-10-2018 VSVS12_02205 cb2dd34928cf0b6793f0b42e27cabd96 415 Pfam PF00563 EAL domain 74 200 4.5E-13 T 11-10-2018 IPR001633 EAL domain VSVS12_02205 cb2dd34928cf0b6793f0b42e27cabd96 415 SMART SM00052 3 205 0.001 T 11-10-2018 IPR001633 EAL domain VSVS12_02205 cb2dd34928cf0b6793f0b42e27cabd96 415 Pfam PF08668 HDOD domain 214 330 1.4E-13 T 11-10-2018 IPR013976 Metal-dependent hydrolase HDOD VSVS12_02205 cb2dd34928cf0b6793f0b42e27cabd96 415 Gene3D G3DSA:3.20.20.450 12 205 2.5E-15 T 11-10-2018 IPR035919 EAL domain superfamily VSVS12_00585 9282a6ec93f247b3a30cfeea322a9a15 179 PIRSF PIRSF002070 2 178 5.0E-35 T 11-10-2018 VSVS12_00585 9282a6ec93f247b3a30cfeea322a9a15 179 SUPERFAMILY SSF50249 4 179 1.06E-61 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_00585 9282a6ec93f247b3a30cfeea322a9a15 179 Pfam PF00436 Single-strand binding protein family 6 106 2.7E-42 T 11-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 VSVS12_00585 9282a6ec93f247b3a30cfeea322a9a15 179 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 179 1.2E-62 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 VSVS12_00585 9282a6ec93f247b3a30cfeea322a9a15 179 Hamap MF_00984 Single-stranded DNA-binding protein. 6 118 38.626 T 11-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 VSVS12_00585 9282a6ec93f247b3a30cfeea322a9a15 179 Gene3D G3DSA:2.40.50.140 2 149 6.7E-50 T 11-10-2018 VSVS12_02760 401b951db37b55b0445ce8afe38c78ca 162 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 12 156 5.2E-51 T 11-10-2018 IPR008136 CinA, C-terminal VSVS12_02760 401b951db37b55b0445ce8afe38c78ca 162 SUPERFAMILY SSF142433 7 160 1.23E-56 T 11-10-2018 IPR036653 CinA-like, C-terminal VSVS12_02760 401b951db37b55b0445ce8afe38c78ca 162 Gene3D G3DSA:3.90.950.20 1 160 1.7E-57 T 11-10-2018 IPR036653 CinA-like, C-terminal VSVS12_02760 401b951db37b55b0445ce8afe38c78ca 162 Pfam PF02464 Competence-damaged protein 7 158 7.9E-58 T 11-10-2018 IPR008136 CinA, C-terminal VSVS12_03745 2ca67692624953ce23b16ac284dd14bd 107 SMART SM00530 10 69 6.2E-9 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VSVS12_03745 2ca67692624953ce23b16ac284dd14bd 107 SUPERFAMILY SSF47413 6 74 5.09E-11 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VSVS12_03745 2ca67692624953ce23b16ac284dd14bd 107 Gene3D G3DSA:1.10.260.40 7 105 1.2E-18 T 11-10-2018 VSVS12_03745 2ca67692624953ce23b16ac284dd14bd 107 Pfam PF12844 Helix-turn-helix domain 10 68 7.7E-9 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VSVS12_03699 ed20d6fc6839adaf459e1d1632181a19 215 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 152 215 1.2E-4 T 11-10-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 VSVS12_03699 ed20d6fc6839adaf459e1d1632181a19 215 Gene3D G3DSA:2.40.160.20 17 215 2.2E-21 T 11-10-2018 VSVS12_03699 ed20d6fc6839adaf459e1d1632181a19 215 SUPERFAMILY SSF56925 19 215 7.59E-21 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VSVS12_03699 ed20d6fc6839adaf459e1d1632181a19 215 Pfam PF13505 Outer membrane protein beta-barrel domain 8 215 2.5E-16 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel VSVS12_03317 7a9327b3ea409a912c84c9d0eb737864 137 SUPERFAMILY SSF51316 1 137 9.21E-35 T 11-10-2018 IPR011057 Mss4-like superfamily VSVS12_03317 7a9327b3ea409a912c84c9d0eb737864 137 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 27 119 7.9E-17 T 11-10-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 VSVS12_03317 7a9327b3ea409a912c84c9d0eb737864 137 Gene3D G3DSA:3.90.1590.10 3 118 5.3E-12 T 11-10-2018 VSVS12_00724 d59890ab3757f7c919d784c52f3bdd6d 98 Gene3D G3DSA:3.30.110.60 1 98 3.0E-35 T 11-10-2018 IPR035920 YhbY-like superfamily VSVS12_00724 d59890ab3757f7c919d784c52f3bdd6d 98 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 97 6.3E-38 T 11-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 VSVS12_00724 d59890ab3757f7c919d784c52f3bdd6d 98 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 3.6E-19 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 VSVS12_00724 d59890ab3757f7c919d784c52f3bdd6d 98 SMART SM01103 3 86 1.2E-39 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 VSVS12_00724 d59890ab3757f7c919d784c52f3bdd6d 98 SUPERFAMILY SSF75471 1 94 1.96E-28 T 11-10-2018 IPR035920 YhbY-like superfamily VSVS12_00724 d59890ab3757f7c919d784c52f3bdd6d 98 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 98 4.0E-41 T 11-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 VSVS12_00080 e280abd75826e1fdc828b85bf16c9372 279 SUPERFAMILY SSF53335 9 274 6.98E-95 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_00080 e280abd75826e1fdc828b85bf16c9372 279 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 277 2.9E-116 T 11-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 VSVS12_00080 e280abd75826e1fdc828b85bf16c9372 279 Gene3D G3DSA:3.40.50.150 1 279 1.3E-113 T 11-10-2018 VSVS12_00080 e280abd75826e1fdc828b85bf16c9372 279 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 41.177 T 11-10-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 VSVS12_00565 9c58c651c57e0bb4b20a8e2924774fcd 378 Pfam PF01464 Transglycosylase SLT domain 211 335 1.9E-29 T 11-10-2018 IPR008258 Transglycosylase SLT domain 1 VSVS12_00565 9c58c651c57e0bb4b20a8e2924774fcd 378 SUPERFAMILY SSF53955 206 370 1.35E-36 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily VSVS12_00565 9c58c651c57e0bb4b20a8e2924774fcd 378 Pfam PF11873 Domain of unknown function (DUF3393) 4 205 3.2E-75 T 11-10-2018 IPR024570 Murein transglycosylase-C, N-terminal VSVS12_00565 9c58c651c57e0bb4b20a8e2924774fcd 378 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 228 256 - T 11-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 VSVS12_00565 9c58c651c57e0bb4b20a8e2924774fcd 378 Gene3D G3DSA:1.10.530.10 190 371 1.6E-49 T 11-10-2018 VSVS12_01646 4f111cb9d876a2d647aac48361034fb6 109 Pfam PF04358 DsrC like protein 4 109 4.1E-42 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE VSVS12_01646 4f111cb9d876a2d647aac48361034fb6 109 PIRSF PIRSF006223 2 109 2.9E-39 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE VSVS12_01646 4f111cb9d876a2d647aac48361034fb6 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 3 109 1.3E-47 T 11-10-2018 IPR007453 Sulphur transfer protein DsrC/TusE VSVS12_01646 4f111cb9d876a2d647aac48361034fb6 109 Gene3D G3DSA:1.10.10.370 39 109 3.3E-29 T 11-10-2018 VSVS12_01646 4f111cb9d876a2d647aac48361034fb6 109 SUPERFAMILY SSF69721 2 109 4.58E-40 T 11-10-2018 IPR025526 DsrC-like domain superfamily VSVS12_01646 4f111cb9d876a2d647aac48361034fb6 109 Gene3D G3DSA:3.30.1420.10 2 37 3.2E-12 T 11-10-2018 VSVS12_03094 849321ee7b57d657bf011723eb74a754 333 Pfam PF02112 cAMP phosphodiesterases class-II 29 328 4.6E-55 T 11-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 VSVS12_03094 849321ee7b57d657bf011723eb74a754 333 PIRSF PIRSF000962 2 333 2.8E-108 T 11-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 VSVS12_03094 849321ee7b57d657bf011723eb74a754 333 SUPERFAMILY SSF56281 33 304 5.18E-20 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VSVS12_03094 849321ee7b57d657bf011723eb74a754 333 ProSitePatterns PS00607 cAMP phosphodiesterases class-II signature. 107 121 - T 11-10-2018 IPR024225 Cyclic-AMP phosphodiesterase class-II, conserved site GO:0008081 VSVS12_03094 849321ee7b57d657bf011723eb74a754 333 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 130 151 1.0E-30 T 11-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 VSVS12_03094 849321ee7b57d657bf011723eb74a754 333 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 259 272 1.0E-30 T 11-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 VSVS12_03094 849321ee7b57d657bf011723eb74a754 333 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 103 121 1.0E-30 T 11-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 VSVS12_03094 849321ee7b57d657bf011723eb74a754 333 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 284 295 1.0E-30 T 11-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 VSVS12_03094 849321ee7b57d657bf011723eb74a754 333 PRINTS PR00388 3'5'-cyclic nucleotide class II phosphodiesterase signature 240 251 1.0E-30 T 11-10-2018 IPR000396 Cyclic-AMP phosphodiesterase, class-II GO:0004115|GO:0006198 VSVS12_03094 849321ee7b57d657bf011723eb74a754 333 Gene3D G3DSA:3.60.15.10 35 312 1.2E-15 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VSVS12_01489 ddb74edd5e4f4abc18c4b858562bb4ed 250 SUPERFAMILY SSF53167 21 248 9.43E-63 T 11-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 VSVS12_01489 ddb74edd5e4f4abc18c4b858562bb4ed 250 Pfam PF01048 Phosphorylase superfamily 21 242 2.7E-47 T 11-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 VSVS12_01489 ddb74edd5e4f4abc18c4b858562bb4ed 250 Gene3D G3DSA:3.40.50.1580 18 250 6.9E-67 T 11-10-2018 VSVS12_01489 ddb74edd5e4f4abc18c4b858562bb4ed 250 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 22 250 2.0E-54 T 11-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 VSVS12_01067 6ff661d9f64b826b2a7db674f8044593 81 Gene3D G3DSA:3.10.20.30 1 81 1.2E-24 T 11-10-2018 IPR012675 Beta-grasp domain superfamily VSVS12_01067 6ff661d9f64b826b2a7db674f8044593 81 SUPERFAMILY SSF54285 1 81 9.81E-22 T 11-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp VSVS12_01067 6ff661d9f64b826b2a7db674f8044593 81 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 81 2.9E-22 T 11-10-2018 VSVS12_01067 6ff661d9f64b826b2a7db674f8044593 81 Pfam PF02597 ThiS family 4 81 5.6E-22 T 11-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 VSVS12_02964 1bc6f3eb838b2180eefb31147d187928 159 SUPERFAMILY SSF75217 2 157 6.41E-44 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases VSVS12_02964 1bc6f3eb838b2180eefb31147d187928 159 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 156 32.664 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 VSVS12_02964 1bc6f3eb838b2180eefb31147d187928 159 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 158 6.7E-58 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 VSVS12_02964 1bc6f3eb838b2180eefb31147d187928 159 Pfam PF00588 SpoU rRNA Methylase family 3 147 9.1E-35 T 11-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 VSVS12_02964 1bc6f3eb838b2180eefb31147d187928 159 PIRSF PIRSF029256 1 159 5.5E-66 T 11-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 VSVS12_02964 1bc6f3eb838b2180eefb31147d187928 159 Gene3D G3DSA:3.40.1280.10 1 159 6.5E-65 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VSVS12_02260 06161dba15131466e0f957a01a098149 198 Gene3D G3DSA:3.10.180.10 5 198 3.6E-63 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VSVS12_02260 06161dba15131466e0f957a01a098149 198 SUPERFAMILY SSF54593 8 197 7.31E-65 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VSVS12_02260 06161dba15131466e0f957a01a098149 198 Pfam PF06185 YecM protein 12 196 5.1E-67 T 11-10-2018 IPR010393 Protein of unknown function DUF991 VSVS12_02497 8f887d95a3790f183e8aeb737f6dbef9 230 Gene3D G3DSA:3.90.1010.10 42 116 8.6E-7 T 11-10-2018 VSVS12_02497 8f887d95a3790f183e8aeb737f6dbef9 230 SUPERFAMILY SSF82649 57 101 1.02E-7 T 11-10-2018 VSVS12_02497 8f887d95a3790f183e8aeb737f6dbef9 230 Pfam PF01592 NifU-like N terminal domain 56 101 1.3E-4 T 11-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 VSVS12_00243 c0f4eab428e8dabf090dc70df5daa55f 200 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 11-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 VSVS12_00243 c0f4eab428e8dabf090dc70df5daa55f 200 SUPERFAMILY SSF52833 20 196 1.21E-43 T 11-10-2018 IPR036249 Thioredoxin-like superfamily VSVS12_00243 c0f4eab428e8dabf090dc70df5daa55f 200 PIRSF PIRSF001488 1 200 1.8E-67 T 11-10-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL VSVS12_00243 c0f4eab428e8dabf090dc70df5daa55f 200 Pfam PF01323 DSBA-like thioredoxin domain 40 189 9.3E-27 T 11-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 VSVS12_00243 c0f4eab428e8dabf090dc70df5daa55f 200 Gene3D G3DSA:3.40.30.10 17 200 2.8E-53 T 11-10-2018 VSVS12_03285 7b4db713a9a83aeba60d22f46cc3b53d 143 Gene3D G3DSA:3.30.420.470 22 137 2.2E-12 T 11-10-2018 VSVS12_03285 7b4db713a9a83aeba60d22f46cc3b53d 143 Pfam PF13358 DDE superfamily endonuclease 6 111 7.7E-20 T 11-10-2018 IPR038717 Tc1-like transposase, DDE domain VSVS12_02369 5e4b4c1238b09d9c68d394b0328bcf8e 126 SUPERFAMILY SSF81343 4 126 5.67E-31 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VSVS12_02369 5e4b4c1238b09d9c68d394b0328bcf8e 126 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 5 123 3.7E-36 T 11-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VSVS12_02369 5e4b4c1238b09d9c68d394b0328bcf8e 126 PIRSF PIRSF000178 1 126 1.3E-29 T 11-10-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VSVS12_02369 5e4b4c1238b09d9c68d394b0328bcf8e 126 Gene3D G3DSA:1.20.1300.10 1 126 3.7E-41 T 11-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VSVS12_02369 5e4b4c1238b09d9c68d394b0328bcf8e 126 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 82 95 - T 11-10-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VSVS12_02369 5e4b4c1238b09d9c68d394b0328bcf8e 126 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 4 120 8.5E-25 T 11-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 VSVS12_03912 a63ed7c9db63d2ff2772f9e116a20fdb 152 Pfam PF03061 Thioesterase superfamily 52 128 4.1E-13 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 VSVS12_03912 a63ed7c9db63d2ff2772f9e116a20fdb 152 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 21 135 1.3E-36 T 11-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 VSVS12_03912 a63ed7c9db63d2ff2772f9e116a20fdb 152 SUPERFAMILY SSF54637 1 137 4.41E-29 T 11-10-2018 IPR029069 HotDog domain superfamily VSVS12_03912 a63ed7c9db63d2ff2772f9e116a20fdb 152 Gene3D G3DSA:3.10.129.10 1 146 7.1E-56 T 11-10-2018 VSVS12_03098 88bc1f658316a5b611b216d51a2d7015 145 SUPERFAMILY SSF55729 38 140 3.55E-24 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_03098 88bc1f658316a5b611b216d51a2d7015 145 Gene3D G3DSA:3.40.630.30 36 140 1.0E-26 T 11-10-2018 VSVS12_03098 88bc1f658316a5b611b216d51a2d7015 145 Pfam PF00583 Acetyltransferase (GNAT) family 35 118 2.7E-12 T 11-10-2018 IPR000182 GNAT domain VSVS12_04177 dbd4d33afe0f2fe8770384d152e6d3df 244 TIGRFAM TIGR03950 sidero_Fe_reduc: siderophore ferric iron reductase, AHA_1954 family 10 238 7.4E-87 T 11-10-2018 IPR023998 Siderophore ferric iron reductase, AHA1954 family VSVS12_00851 3ff512463f6a55f9582dec1a3f8491b6 411 Gene3D G3DSA:3.40.605.10 11 403 1.2E-151 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VSVS12_00851 3ff512463f6a55f9582dec1a3f8491b6 411 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 1 410 38.153 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VSVS12_00851 3ff512463f6a55f9582dec1a3f8491b6 411 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 317 338 - T 11-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VSVS12_00851 3ff512463f6a55f9582dec1a3f8491b6 411 SUPERFAMILY SSF53720 2 404 4.32E-111 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VSVS12_00851 3ff512463f6a55f9582dec1a3f8491b6 411 PIRSF PIRSF000151 1 411 1.1E-163 T 11-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 VSVS12_00851 3ff512463f6a55f9582dec1a3f8491b6 411 Gene3D G3DSA:3.40.309.10 218 368 1.2E-151 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VSVS12_00851 3ff512463f6a55f9582dec1a3f8491b6 411 Pfam PF00171 Aldehyde dehydrogenase family 3 274 9.9E-16 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VSVS12_00851 3ff512463f6a55f9582dec1a3f8491b6 411 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 5 400 6.5E-165 T 11-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 VSVS12_02359 872cdadc6bec30808451f28aabff5297 99 Pfam PF11743 Protein of unknown function (DUF3301) 6 96 4.4E-29 T 11-10-2018 IPR021732 Protein of unknown function DUF3301 VSVS12_00617 ea5912135cd2b7c6d42918d40b014d0e 545 Gene3D G3DSA:3.10.540.20 38 85 1.6E-6 T 11-10-2018 VSVS12_00617 ea5912135cd2b7c6d42918d40b014d0e 545 Pfam PF00589 Phage integrase family 293 500 3.6E-6 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VSVS12_00617 ea5912135cd2b7c6d42918d40b014d0e 545 Gene3D G3DSA:1.10.443.10 266 506 2.8E-17 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VSVS12_00617 ea5912135cd2b7c6d42918d40b014d0e 545 SUPERFAMILY SSF56349 297 502 2.21E-12 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VSVS12_00466 2de2474d65d4a6f23a93bf8ba013122d 231 SMART SM00671 128 163 7.0E-6 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_00466 2de2474d65d4a6f23a93bf8ba013122d 231 SMART SM00671 164 199 22.0 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_00466 2de2474d65d4a6f23a93bf8ba013122d 231 SMART SM00671 92 127 0.015 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_00466 2de2474d65d4a6f23a93bf8ba013122d 231 Gene3D G3DSA:1.25.40.10 55 231 2.7E-25 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_00466 2de2474d65d4a6f23a93bf8ba013122d 231 SUPERFAMILY SSF81901 85 200 1.31E-21 T 11-10-2018 VSVS12_00466 2de2474d65d4a6f23a93bf8ba013122d 231 Pfam PF08238 Sel1 repeat 96 126 0.029 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_00466 2de2474d65d4a6f23a93bf8ba013122d 231 Pfam PF08238 Sel1 repeat 129 163 3.0E-5 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_01550 78250542dd1387194e61667233c1b1ee 540 TIGRFAM TIGR03799 NOD_PanD_pyr: putative pyridoxal-dependent aspartate 1-decarboxylase 2 521 7.6E-295 T 11-10-2018 IPR022517 Aspartate 1-decarboxylase, pyridoxal-dependent KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 VSVS12_01550 78250542dd1387194e61667233c1b1ee 540 SUPERFAMILY SSF53383 19 522 1.05E-112 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VSVS12_01550 78250542dd1387194e61667233c1b1ee 540 Gene3D G3DSA:3.40.640.10 116 381 9.2E-110 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VSVS12_01550 78250542dd1387194e61667233c1b1ee 540 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 62 436 1.2E-53 T 11-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 VSVS12_01550 78250542dd1387194e61667233c1b1ee 540 Gene3D G3DSA:3.90.1150.170 50 517 9.2E-110 T 11-10-2018 VSVS12_03857 9f4796470f0b2ede9e083212cbdc90d2 575 SUPERFAMILY SSF52794 3 100 5.93E-27 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VSVS12_03857 9f4796470f0b2ede9e083212cbdc90d2 575 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 229 565 2.6E-140 T 11-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 VSVS12_03857 9f4796470f0b2ede9e083212cbdc90d2 575 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 123 206 1.1E-36 T 11-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 VSVS12_03857 9f4796470f0b2ede9e083212cbdc90d2 575 SUPERFAMILY SSF52794 121 221 1.34E-36 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VSVS12_03857 9f4796470f0b2ede9e083212cbdc90d2 575 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 94 3.6E-15 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VSVS12_03857 9f4796470f0b2ede9e083212cbdc90d2 575 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 124 209 4.1E-16 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VSVS12_03857 9f4796470f0b2ede9e083212cbdc90d2 575 Pfam PF02378 Phosphotransferase system, EIIC 246 509 5.8E-14 T 11-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 VSVS12_03857 9f4796470f0b2ede9e083212cbdc90d2 575 Gene3D G3DSA:3.40.50.2300 1 102 5.9E-25 T 11-10-2018 VSVS12_03857 9f4796470f0b2ede9e083212cbdc90d2 575 Gene3D G3DSA:3.40.50.2300 112 220 3.6E-40 T 11-10-2018 VSVS12_01356 096ddf73ac821559e0978370a0ecb125 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 3.0E-14 T 11-10-2018 VSVS12_01356 096ddf73ac821559e0978370a0ecb125 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 290 312 3.0E-14 T 11-10-2018 VSVS12_01356 096ddf73ac821559e0978370a0ecb125 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 167 185 3.0E-14 T 11-10-2018 VSVS12_01356 096ddf73ac821559e0978370a0ecb125 429 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 3.0E-14 T 11-10-2018 VSVS12_01356 096ddf73ac821559e0978370a0ecb125 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 305 312 4.2E-7 T 11-10-2018 VSVS12_01356 096ddf73ac821559e0978370a0ecb125 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 167 192 4.2E-7 T 11-10-2018 VSVS12_01356 096ddf73ac821559e0978370a0ecb125 429 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 4.2E-7 T 11-10-2018 VSVS12_01356 096ddf73ac821559e0978370a0ecb125 429 Gene3D G3DSA:3.50.50.100 1 406 1.0E-113 T 11-10-2018 VSVS12_01356 096ddf73ac821559e0978370a0ecb125 429 SUPERFAMILY SSF51905 3 336 3.24E-28 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_01356 096ddf73ac821559e0978370a0ecb125 429 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 333 6.3E-62 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VSVS12_03990 933b80bcf5f6ed818599f1db4252b22c 164 SUPERFAMILY SSF48452 6 91 1.14E-6 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_00233 4c88c0241faace5148e0a570318b02de 242 Gene3D G3DSA:3.40.50.300 105 232 1.0E-23 T 11-10-2018 VSVS12_00233 4c88c0241faace5148e0a570318b02de 242 Pfam PF13541 Subunit ChlI of Mg-chelatase 1 60 1.3E-13 T 11-10-2018 VSVS12_00233 4c88c0241faace5148e0a570318b02de 242 SUPERFAMILY SSF54211 1 87 1.21E-10 T 11-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold VSVS12_00233 4c88c0241faace5148e0a570318b02de 242 Pfam PF01078 Magnesium chelatase, subunit ChlI 108 224 1.3E-52 T 11-10-2018 IPR000523 Magnesium chelatase ChlI domain VSVS12_00233 4c88c0241faace5148e0a570318b02de 242 SUPERFAMILY SSF52540 106 223 3.33E-22 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_04043 729d2ce909b70ea7e633d8098b245dc4 139 Pfam PF08937 MTH538 TIR-like domain (DUF1863) 2 102 3.4E-8 T 11-10-2018 IPR015032 MTH538 TIR-like domain VSVS12_04043 729d2ce909b70ea7e633d8098b245dc4 139 Gene3D G3DSA:3.40.50.10140 1 133 1.4E-7 T 11-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily VSVS12_04043 729d2ce909b70ea7e633d8098b245dc4 139 SUPERFAMILY SSF52200 3 113 8.76E-7 T 11-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily VSVS12_00232 d82772308ca79ae4a1eb56ed2fd06039 566 Pfam PF00239 Resolvase, N terminal domain 6 161 1.4E-19 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VSVS12_00232 d82772308ca79ae4a1eb56ed2fd06039 566 Gene3D G3DSA:1.10.10.2600 169 293 4.8E-9 T 11-10-2018 IPR038109 DNA-binding recombinase domain superfamily VSVS12_00232 d82772308ca79ae4a1eb56ed2fd06039 566 Gene3D G3DSA:3.40.50.1390 2 168 1.4E-28 T 11-10-2018 VSVS12_00232 d82772308ca79ae4a1eb56ed2fd06039 566 Pfam PF13408 Recombinase zinc beta ribbon domain 305 358 2.6E-7 T 11-10-2018 IPR025827 Recombinase zinc beta ribbon domain VSVS12_00232 d82772308ca79ae4a1eb56ed2fd06039 566 SMART SM00857 5 171 5.6E-21 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VSVS12_00232 d82772308ca79ae4a1eb56ed2fd06039 566 SUPERFAMILY SSF53041 5 162 3.27E-16 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 VSVS12_00232 d82772308ca79ae4a1eb56ed2fd06039 566 Pfam PF07508 Recombinase 197 291 3.2E-16 T 11-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 VSVS12_01580 26c30c4b8b6242fc45470b33831c4aeb 241 Pfam PF12119 Protein of unknown function (DUF3581) 1 217 7.9E-97 T 11-10-2018 IPR021974 Protein of unknown function DUF3581 VSVS12_01807 8465568fbe2ecb5f5ef58238aea8cf65 221 Gene3D G3DSA:1.10.10.10 119 221 9.2E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_01807 8465568fbe2ecb5f5ef58238aea8cf65 221 Gene3D G3DSA:3.40.50.2300 1 118 6.0E-35 T 11-10-2018 VSVS12_01807 8465568fbe2ecb5f5ef58238aea8cf65 221 SMART SM00448 2 112 3.1E-39 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_01807 8465568fbe2ecb5f5ef58238aea8cf65 221 SUPERFAMILY SSF52172 2 129 2.28E-38 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_01807 8465568fbe2ecb5f5ef58238aea8cf65 221 SUPERFAMILY SSF46894 142 216 9.92E-18 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VSVS12_01807 8465568fbe2ecb5f5ef58238aea8cf65 221 Pfam PF00072 Response regulator receiver domain 4 113 2.2E-28 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_01807 8465568fbe2ecb5f5ef58238aea8cf65 221 SMART SM00862 141 215 1.1E-14 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VSVS12_01807 8465568fbe2ecb5f5ef58238aea8cf65 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 142 215 6.9E-19 T 11-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 VSVS12_03944 35818a6c1c0eb2b32c1794c8a52a9867 368 SUPERFAMILY SSF56935 29 368 6.11E-31 T 11-10-2018 VSVS12_03944 35818a6c1c0eb2b32c1794c8a52a9867 368 Pfam PF13609 Gram-negative porin 214 342 9.1E-7 T 11-10-2018 VSVS12_03944 35818a6c1c0eb2b32c1794c8a52a9867 368 Gene3D G3DSA:2.40.160.10 119 368 6.8E-12 T 11-10-2018 IPR023614 Porin domain superfamily VSVS12_00360 756dba288c201ee8e5064584fa879522 121 Pfam PF11333 Protein of unknown function (DUF3135) 8 87 6.1E-29 T 11-10-2018 IPR021482 Protein of unknown function DUF3135 VSVS12_04088 4ab5a5fe057e2939c056bf65e9007ae6 211 Gene3D G3DSA:2.160.10.10 2 207 3.3E-56 T 11-10-2018 VSVS12_04088 4ab5a5fe057e2939c056bf65e9007ae6 211 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 144 4.9E-10 T 11-10-2018 IPR001451 Hexapeptide repeat VSVS12_04088 4ab5a5fe057e2939c056bf65e9007ae6 211 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 118 146 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VSVS12_04088 4ab5a5fe057e2939c056bf65e9007ae6 211 SUPERFAMILY SSF51161 32 201 7.76E-43 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily VSVS12_03408 bfd3ff25664f93547f7f3ea99f37086d 526 Gene3D G3DSA:3.40.50.300 2 273 2.7E-54 T 11-10-2018 VSVS12_03408 bfd3ff25664f93547f7f3ea99f37086d 526 Gene3D G3DSA:3.40.50.300 274 525 8.5E-51 T 11-10-2018 VSVS12_03408 bfd3ff25664f93547f7f3ea99f37086d 526 SUPERFAMILY SSF52540 303 519 3.8E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03408 bfd3ff25664f93547f7f3ea99f37086d 526 Pfam PF12848 ABC transporter 216 299 4.6E-21 T 11-10-2018 IPR032781 ABC-transporter extension domain VSVS12_03408 bfd3ff25664f93547f7f3ea99f37086d 526 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_03408 bfd3ff25664f93547f7f3ea99f37086d 526 Pfam PF00005 ABC transporter 331 459 6.6E-19 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_03408 bfd3ff25664f93547f7f3ea99f37086d 526 SUPERFAMILY SSF52540 3 230 8.77E-43 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03408 bfd3ff25664f93547f7f3ea99f37086d 526 Pfam PF00005 ABC transporter 10 176 4.2E-20 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_03408 bfd3ff25664f93547f7f3ea99f37086d 526 SMART SM00382 18 230 5.0E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_03408 bfd3ff25664f93547f7f3ea99f37086d 526 SMART SM00382 336 505 5.2E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_01153 54b73890be12db02f2fc5ca9dbc897ef 146 SUPERFAMILY SSF53062 1 126 1.14E-35 T 11-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 VSVS12_01153 54b73890be12db02f2fc5ca9dbc897ef 146 Pfam PF03610 PTS system fructose IIA component 3 115 2.9E-28 T 11-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 VSVS12_01153 54b73890be12db02f2fc5ca9dbc897ef 146 Gene3D G3DSA:3.40.50.510 1 144 8.3E-38 T 11-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 VSVS12_02336 f6968191d350ad46daa0fbca175b900b 756 SUPERFAMILY SSF48452 331 438 9.48E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_02336 f6968191d350ad46daa0fbca175b900b 756 Gene3D G3DSA:1.25.40.10 69 239 1.5E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_02336 f6968191d350ad46daa0fbca175b900b 756 Gene3D G3DSA:1.25.40.10 240 448 3.0E-17 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_02336 f6968191d350ad46daa0fbca175b900b 756 SUPERFAMILY SSF48452 176 361 3.98E-15 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_02336 f6968191d350ad46daa0fbca175b900b 756 SMART SM00028 292 325 1.2 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_02336 f6968191d350ad46daa0fbca175b900b 756 SMART SM00028 86 119 28.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_02336 f6968191d350ad46daa0fbca175b900b 756 SMART SM00028 332 365 39.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_02336 f6968191d350ad46daa0fbca175b900b 756 SMART SM00028 252 285 22.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_00720 2637e944bd457a89b61dfb96fb0e88d6 281 Gene3D G3DSA:1.10.357.20 93 278 3.2E-52 T 11-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain VSVS12_00720 2637e944bd457a89b61dfb96fb0e88d6 281 Pfam PF01769 Divalent cation transporter 142 271 1.3E-26 T 11-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 VSVS12_00720 2637e944bd457a89b61dfb96fb0e88d6 281 SUPERFAMILY SSF161093 99 278 2.09E-44 T 11-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 VSVS12_03139 040fe4b0acca5723bf476912009baa55 359 SUPERFAMILY SSF117281 34 349 3.14E-17 T 11-10-2018 IPR015915 Kelch-type beta propeller GO:0005515 VSVS12_03139 040fe4b0acca5723bf476912009baa55 359 TIGRFAM TIGR03547 muta_rot_YjhT: mutatrotase, YjhT family 10 358 6.0E-111 T 11-10-2018 IPR019936 Mutatrotase, YjhT-like VSVS12_01867 097b652ca36482490a8dc01313a2c1f2 115 PIRSF PIRSF028139 1 114 2.5E-34 T 11-10-2018 IPR014980 Dopa 4,5-dioxygenase VSVS12_01867 097b652ca36482490a8dc01313a2c1f2 115 Gene3D G3DSA:3.30.70.1240 3 115 6.9E-38 T 11-10-2018 IPR023389 DOPA-like superfamily VSVS12_01867 097b652ca36482490a8dc01313a2c1f2 115 Pfam PF08883 Dopa 4,5-dioxygenase family 11 110 1.5E-29 T 11-10-2018 IPR014980 Dopa 4,5-dioxygenase VSVS12_01867 097b652ca36482490a8dc01313a2c1f2 115 SUPERFAMILY SSF143410 4 112 1.27E-37 T 11-10-2018 IPR023389 DOPA-like superfamily VSVS12_02872 f9e9518a2de78c2923813b81ae6a7827 235 SMART SM00382 36 233 2.1E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_02872 f9e9518a2de78c2923813b81ae6a7827 235 Pfam PF00005 ABC transporter 32 181 5.5E-28 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_02872 f9e9518a2de78c2923813b81ae6a7827 235 SUPERFAMILY SSF52540 31 225 2.07E-50 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02872 f9e9518a2de78c2923813b81ae6a7827 235 Gene3D G3DSA:3.40.50.300 7 233 5.7E-55 T 11-10-2018 VSVS12_00679 2a6ad08ba602b3950a08a0e08fd28873 264 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 258 2.8E-107 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 VSVS12_00679 2a6ad08ba602b3950a08a0e08fd28873 264 PIRSF PIRSF000388 1 264 2.4E-101 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 VSVS12_00679 2a6ad08ba602b3950a08a0e08fd28873 264 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 262 1.1E-112 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 VSVS12_00679 2a6ad08ba602b3950a08a0e08fd28873 264 SUPERFAMILY SSF51621 3 262 2.24E-104 T 11-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 VSVS12_00679 2a6ad08ba602b3950a08a0e08fd28873 264 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 263 40.923 T 11-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 VSVS12_00679 2a6ad08ba602b3950a08a0e08fd28873 264 Gene3D G3DSA:3.20.20.60 1 263 8.0E-105 T 11-10-2018 VSVS12_01125 79189a2547687c9ea010a60ed3e1ae56 399 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 189 396 1.1E-69 T 11-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 VSVS12_01125 79189a2547687c9ea010a60ed3e1ae56 399 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 5 78 8.3E-24 T 11-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 VSVS12_01125 79189a2547687c9ea010a60ed3e1ae56 399 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 1 395 2.0E-134 T 11-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 VSVS12_01125 79189a2547687c9ea010a60ed3e1ae56 399 Pfam PF07670 Nucleoside recognition 87 182 3.5E-7 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VSVS12_02296 d8a294f65af3e2f57bbd07c5548c8fd9 136 Gene3D G3DSA:2.30.330.10 44 136 4.7E-33 T 11-10-2018 IPR036429 SpoA-like superfamily VSVS12_02296 d8a294f65af3e2f57bbd07c5548c8fd9 136 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 56 126 1.0E-23 T 11-10-2018 IPR001543 Surface presentation of antigen (SpoA) VSVS12_02296 d8a294f65af3e2f57bbd07c5548c8fd9 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 56 72 4.2E-27 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VSVS12_02296 d8a294f65af3e2f57bbd07c5548c8fd9 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 73 89 4.2E-27 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VSVS12_02296 d8a294f65af3e2f57bbd07c5548c8fd9 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 89 102 4.2E-27 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VSVS12_02296 d8a294f65af3e2f57bbd07c5548c8fd9 136 PRINTS PR00956 Flagellar motor switch protein FliN signature 102 117 4.2E-27 T 11-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 VSVS12_02296 d8a294f65af3e2f57bbd07c5548c8fd9 136 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 54 128 1.0E-32 T 11-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 VSVS12_02296 d8a294f65af3e2f57bbd07c5548c8fd9 136 SUPERFAMILY SSF101801 54 134 3.4E-24 T 11-10-2018 IPR036429 SpoA-like superfamily VSVS12_04565 b236fa6712442d0970931584ba6a50ad 399 Pfam PF13614 AAA domain 107 277 5.4E-25 T 11-10-2018 IPR025669 AAA domain VSVS12_04565 b236fa6712442d0970931584ba6a50ad 399 Gene3D G3DSA:3.40.50.300 106 395 9.1E-54 T 11-10-2018 VSVS12_04565 b236fa6712442d0970931584ba6a50ad 399 SUPERFAMILY SSF52540 107 362 1.29E-32 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03356 f447a2a716965810ef627a298960a0c8 173 SUPERFAMILY SSF52218 1 172 3.49E-35 T 11-10-2018 IPR029039 Flavoprotein-like superfamily VSVS12_03356 f447a2a716965810ef627a298960a0c8 173 Gene3D G3DSA:3.40.50.360 1 173 3.0E-32 T 11-10-2018 IPR029039 Flavoprotein-like superfamily VSVS12_03356 f447a2a716965810ef627a298960a0c8 173 Pfam PF03358 NADPH-dependent FMN reductase 1 127 6.4E-27 T 11-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 VSVS12_02179 df4f49bcfed14e21ebb4cafd314d266e 295 SUPERFAMILY SSF103481 72 152 2.62E-6 T 11-10-2018 VSVS12_02179 df4f49bcfed14e21ebb4cafd314d266e 295 SUPERFAMILY SSF103481 190 291 2.22E-12 T 11-10-2018 VSVS12_02179 df4f49bcfed14e21ebb4cafd314d266e 295 Pfam PF00892 EamA-like transporter family 160 288 1.5E-17 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VSVS12_03742 03c9fd2bc754c2a20a660719d0f9734d 218 SUPERFAMILY SSF56349 21 176 1.39E-11 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VSVS12_03742 03c9fd2bc754c2a20a660719d0f9734d 218 Gene3D G3DSA:1.10.443.10 41 203 1.7E-12 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VSVS12_01036 0f70b4a0eff3a57a636b835dd2b06c42 218 Gene3D G3DSA:3.40.50.1390 1 156 1.4E-17 T 11-10-2018 VSVS12_01036 0f70b4a0eff3a57a636b835dd2b06c42 218 SMART SM00857 1 146 1.7E-16 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VSVS12_01036 0f70b4a0eff3a57a636b835dd2b06c42 218 Pfam PF00239 Resolvase, N terminal domain 2 144 1.1E-17 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VSVS12_01036 0f70b4a0eff3a57a636b835dd2b06c42 218 SUPERFAMILY SSF53041 2 145 7.46E-15 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 VSVS12_00658 b9fec2e433b76edd0185d6d458d52c7e 356 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 4 354 5.0E-133 T 11-10-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 VSVS12_00658 b9fec2e433b76edd0185d6d458d52c7e 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 8 354 1.8E-71 T 11-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 VSVS12_02237 64913ed1ed9f9704e1e75cf92d1f5f57 406 TIGRFAM TIGR03142 cytochro_ccmI: cytochrome c-type biogenesis protein CcmI 3 116 2.3E-27 T 11-10-2018 IPR017560 Cytochrome c-type biogenesis protein CcmI VSVS12_02237 64913ed1ed9f9704e1e75cf92d1f5f57 406 Gene3D G3DSA:1.25.40.10 154 296 5.9E-18 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_02237 64913ed1ed9f9704e1e75cf92d1f5f57 406 SUPERFAMILY SSF48452 164 267 2.69E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_02237 64913ed1ed9f9704e1e75cf92d1f5f57 406 Pfam PF14559 Tetratricopeptide repeat 178 245 4.3E-7 T 11-10-2018 VSVS12_01133 edd2dc99f837b05928e724cb995c05db 319 PIRSF PIRSF015558 4 304 1.3E-74 T 11-10-2018 IPR016634 WYL domain protein, s026 type VSVS12_01133 edd2dc99f837b05928e724cb995c05db 319 Pfam PF13280 WYL domain 127 271 1.0E-8 T 11-10-2018 IPR026881 WYL domain VSVS12_01925 76c97c7201776fea7956b3c4cbb0b6c7 218 Gene3D G3DSA:2.60.120.620 1 215 3.6E-53 T 11-10-2018 VSVS12_01925 76c97c7201776fea7956b3c4cbb0b6c7 218 Pfam PF10014 2OG-Fe dioxygenase 24 208 2.2E-53 T 11-10-2018 IPR018724 2OG-Fe dioxygenase VSVS12_01336 2ed51a31b82157119c55b95eeb8348e0 150 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 5 150 36.44 T 11-10-2018 IPR007334 Uncharacterised protein family UPF0208 VSVS12_01336 2ed51a31b82157119c55b95eeb8348e0 150 Pfam PF04217 Protein of unknown function, DUF412 8 146 1.5E-58 T 11-10-2018 IPR007334 Uncharacterised protein family UPF0208 VSVS12_02012 b1d0584104205de5747e887ee39ba17e 161 Pfam PF11220 Protein of unknown function (DUF3015) 21 159 6.6E-48 T 11-10-2018 IPR021383 Protein of unknown function DUF3015 VSVS12_03565 25de66bbf6f25a51084ca85209d75e77 110 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 1 103 2.7E-18 T 11-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 VSVS12_03565 25de66bbf6f25a51084ca85209d75e77 110 SUPERFAMILY SSF52091 1 106 1.35E-21 T 11-10-2018 IPR036513 STAS domain superfamily VSVS12_03565 25de66bbf6f25a51084ca85209d75e77 110 Gene3D G3DSA:3.30.750.24 1 109 4.0E-28 T 11-10-2018 IPR036513 STAS domain superfamily VSVS12_03565 25de66bbf6f25a51084ca85209d75e77 110 Pfam PF01740 STAS domain 3 105 1.5E-13 T 11-10-2018 IPR002645 STAS domain VSVS12_03823 03758c858d20e10aa96f18146315ce5a 218 Pfam PF08212 Lipocalin-like domain 76 216 1.0E-37 T 11-10-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain VSVS12_03823 03758c858d20e10aa96f18146315ce5a 218 PIRSF PIRSF036893 43 218 2.1E-39 T 11-10-2018 IPR022271 Lipocalin, ApoD type VSVS12_03823 03758c858d20e10aa96f18146315ce5a 218 SUPERFAMILY SSF50814 51 217 1.47E-47 T 11-10-2018 IPR012674 Calycin VSVS12_03823 03758c858d20e10aa96f18146315ce5a 218 PRINTS PR01171 Bacterial lipocalin signature 205 215 2.5E-32 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 VSVS12_03823 03758c858d20e10aa96f18146315ce5a 218 PRINTS PR01171 Bacterial lipocalin signature 111 120 2.5E-32 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 VSVS12_03823 03758c858d20e10aa96f18146315ce5a 218 PRINTS PR01171 Bacterial lipocalin signature 92 108 2.5E-32 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 VSVS12_03823 03758c858d20e10aa96f18146315ce5a 218 PRINTS PR01171 Bacterial lipocalin signature 178 189 2.5E-32 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 VSVS12_03823 03758c858d20e10aa96f18146315ce5a 218 PRINTS PR01171 Bacterial lipocalin signature 75 89 2.5E-32 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 VSVS12_03823 03758c858d20e10aa96f18146315ce5a 218 PRINTS PR01171 Bacterial lipocalin signature 145 159 2.5E-32 T 11-10-2018 IPR002446 Lipocalin, bacterial GO:0005215 VSVS12_03823 03758c858d20e10aa96f18146315ce5a 218 Gene3D G3DSA:2.40.128.20 58 217 4.2E-50 T 11-10-2018 IPR012674 Calycin VSVS12_03823 03758c858d20e10aa96f18146315ce5a 218 ProSitePatterns PS00213 Lipocalin signature. 74 87 - T 11-10-2018 IPR022272 Lipocalin family conserved site VSVS12_02356 8bbf0c423da49cfbbdc9b8050a5bd9e9 240 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 50 64 - T 11-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 VSVS12_02356 8bbf0c423da49cfbbdc9b8050a5bd9e9 240 Gene3D G3DSA:3.30.2350.10 1 224 7.0E-59 T 11-10-2018 VSVS12_02356 8bbf0c423da49cfbbdc9b8050a5bd9e9 240 SUPERFAMILY SSF55120 2 237 7.2E-61 T 11-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 VSVS12_02356 8bbf0c423da49cfbbdc9b8050a5bd9e9 240 Pfam PF00849 RNA pseudouridylate synthase 11 170 7.5E-31 T 11-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 VSVS12_03148 0a2cdf30686c04c1536c4d37c0dd0ffb 377 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 5 374 2.2E-85 T 11-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 VSVS12_03148 0a2cdf30686c04c1536c4d37c0dd0ffb 377 Pfam PF01979 Amidohydrolase family 53 376 1.4E-18 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VSVS12_03148 0a2cdf30686c04c1536c4d37c0dd0ffb 377 PIRSF PIRSF038994 2 377 4.5E-93 T 11-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 VSVS12_03148 0a2cdf30686c04c1536c4d37c0dd0ffb 377 Gene3D G3DSA:2.30.40.10 9 374 2.7E-104 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VSVS12_03148 0a2cdf30686c04c1536c4d37c0dd0ffb 377 SUPERFAMILY SSF51338 3 55 1.3E-11 T 11-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 VSVS12_03148 0a2cdf30686c04c1536c4d37c0dd0ffb 377 Gene3D G3DSA:3.20.20.140 57 343 2.7E-104 T 11-10-2018 VSVS12_03148 0a2cdf30686c04c1536c4d37c0dd0ffb 377 SUPERFAMILY SSF51556 56 346 1.29E-80 T 11-10-2018 IPR032466 Metal-dependent hydrolase VSVS12_03943 55ff711ea4dd2d3c48344ff4f68fc71e 161 SUPERFAMILY SSF53850 48 157 4.67E-5 T 11-10-2018 VSVS12_00399 0883a8e6df175171ebe40057019d0889 1026 Gene3D G3DSA:1.10.443.10 495 686 1.4E-9 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VSVS12_00399 0883a8e6df175171ebe40057019d0889 1026 SUPERFAMILY SSF56349 449 666 1.53E-9 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VSVS12_02952 1772388dfc213e9d779a936bcb4aa903 463 PIRSF PIRSF006603 1 449 5.6E-124 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VSVS12_02952 1772388dfc213e9d779a936bcb4aa903 463 TIGRFAM TIGR00797 matE: MATE efflux family protein 22 414 1.3E-55 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VSVS12_02952 1772388dfc213e9d779a936bcb4aa903 463 Pfam PF01554 MatE 22 182 2.7E-25 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VSVS12_02952 1772388dfc213e9d779a936bcb4aa903 463 Pfam PF01554 MatE 245 406 2.8E-21 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VSVS12_00815 6ca5caaf57b12469d69feeddecacb410 141 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 11-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 VSVS12_00815 6ca5caaf57b12469d69feeddecacb410 141 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 36.129 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VSVS12_00815 6ca5caaf57b12469d69feeddecacb410 141 SMART SM00562 3 140 2.5E-90 T 11-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VSVS12_00815 6ca5caaf57b12469d69feeddecacb410 141 SUPERFAMILY SSF54919 1 140 3.01E-61 T 11-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VSVS12_00815 6ca5caaf57b12469d69feeddecacb410 141 Gene3D G3DSA:3.30.70.141 1 141 1.1E-59 T 11-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VSVS12_00815 6ca5caaf57b12469d69feeddecacb410 141 Pfam PF00334 Nucleoside diphosphate kinase 4 138 1.5E-58 T 11-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VSVS12_00815 6ca5caaf57b12469d69feeddecacb410 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 1.5E-38 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VSVS12_00815 6ca5caaf57b12469d69feeddecacb410 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 1.5E-38 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VSVS12_00815 6ca5caaf57b12469d69feeddecacb410 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 1.5E-38 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VSVS12_00815 6ca5caaf57b12469d69feeddecacb410 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 1.5E-38 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VSVS12_00815 6ca5caaf57b12469d69feeddecacb410 141 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 1.5E-38 T 11-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 VSVS12_03910 32a4496f808068ed279889c29f1a1e5a 574 SUPERFAMILY SSF53850 119 560 1.01E-46 T 11-10-2018 VSVS12_03910 32a4496f808068ed279889c29f1a1e5a 574 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 164 306 9.9E-15 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain VSVS12_03910 32a4496f808068ed279889c29f1a1e5a 574 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 119 1.9E-38 T 11-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain VSVS12_03910 32a4496f808068ed279889c29f1a1e5a 574 Gene3D G3DSA:3.40.190.10 122 311 9.7E-28 T 11-10-2018 VSVS12_03527 26417086e5c5113230a16872da890201 342 ProSitePatterns PS00482 Dihydroorotase signature 1. 11 19 - T 11-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VSVS12_03527 26417086e5c5113230a16872da890201 342 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 4 342 1.2E-140 T 11-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VSVS12_03527 26417086e5c5113230a16872da890201 342 ProSitePatterns PS00483 Dihydroorotase signature 2. 244 255 - T 11-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VSVS12_03527 26417086e5c5113230a16872da890201 342 SUPERFAMILY SSF51556 1 342 5.38E-146 T 11-10-2018 IPR032466 Metal-dependent hydrolase VSVS12_03527 26417086e5c5113230a16872da890201 342 PIRSF PIRSF001237 1 342 4.9E-143 T 11-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VSVS12_03527 26417086e5c5113230a16872da890201 342 Hamap MF_00219 Dihydroorotase [pyrC]. 2 342 46.815 T 11-10-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 VSVS12_03527 26417086e5c5113230a16872da890201 342 Pfam PF01979 Amidohydrolase family 11 321 2.9E-18 T 11-10-2018 IPR006680 Amidohydrolase-related GO:0016787 VSVS12_03527 26417086e5c5113230a16872da890201 342 Gene3D G3DSA:3.20.20.140 2 342 2.6E-111 T 11-10-2018 VSVS12_02811 e9abc166326e770b4654ca7dcf60bb5f 147 Pfam PF10980 Protein of unknown function (DUF2787) 18 142 4.5E-37 T 11-10-2018 IPR021248 Protein of unknown function DUF2787 VSVS12_02811 e9abc166326e770b4654ca7dcf60bb5f 147 Gene3D G3DSA:3.10.450.430 2 145 1.3E-34 T 11-10-2018 VSVS12_03902 50244b37760da9dc3e656dd5ca5dc5b8 103 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 3 103 3.9E-39 T 11-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 VSVS12_03902 50244b37760da9dc3e656dd5ca5dc5b8 103 Pfam PF01253 Translation initiation factor SUI1 27 95 3.0E-18 T 11-10-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 VSVS12_03902 50244b37760da9dc3e656dd5ca5dc5b8 103 PIRSF PIRSF037511 1 103 7.2E-34 T 11-10-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 VSVS12_03902 50244b37760da9dc3e656dd5ca5dc5b8 103 SUPERFAMILY SSF55159 3 99 3.66E-26 T 11-10-2018 IPR036877 SUI1 domain superfamily GO:0003743|GO:0006413 VSVS12_03902 50244b37760da9dc3e656dd5ca5dc5b8 103 Gene3D G3DSA:3.30.780.10 23 103 4.3E-31 T 11-10-2018 VSVS12_02854 71ddfed92c2157c53ff4571d10f3ad1c 447 Pfam PF01523 Putative modulator of DNA gyrase 32 324 2.0E-59 T 11-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 VSVS12_02854 71ddfed92c2157c53ff4571d10f3ad1c 447 Gene3D G3DSA:3.30.2290.10 3 233 1.3E-80 T 11-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal VSVS12_02854 71ddfed92c2157c53ff4571d10f3ad1c 447 SUPERFAMILY SSF111283 14 447 2.75E-125 T 11-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 VSVS12_03506 b0a17750c5cf2c55eb85f2d75ca384b0 139 Pfam PF05025 RbsD / FucU transport protein family 1 138 1.1E-48 T 11-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 VSVS12_03506 b0a17750c5cf2c55eb85f2d75ca384b0 139 SUPERFAMILY SSF102546 1 139 1.96E-44 T 11-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 VSVS12_03506 b0a17750c5cf2c55eb85f2d75ca384b0 139 Gene3D G3DSA:3.40.1650.10 8 136 4.6E-37 T 11-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 VSVS12_03506 b0a17750c5cf2c55eb85f2d75ca384b0 139 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 139 33.144 T 11-10-2018 IPR023064 D-ribose pyranase GO:0016872 VSVS12_03359 e4f6f4952b560df4096173ab45892186 517 Gene3D G3DSA:3.40.50.300 1 209 4.9E-77 T 11-10-2018 VSVS12_03359 e4f6f4952b560df4096173ab45892186 517 Pfam PF00271 Helicase conserved C-terminal domain 230 338 1.3E-27 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_03359 e4f6f4952b560df4096173ab45892186 517 SMART SM00490 257 338 1.1E-32 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_03359 e4f6f4952b560df4096173ab45892186 517 SUPERFAMILY SSF52540 73 358 1.3E-75 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03359 e4f6f4952b560df4096173ab45892186 517 Gene3D G3DSA:3.40.50.300 213 439 3.9E-46 T 11-10-2018 VSVS12_03359 e4f6f4952b560df4096173ab45892186 517 SMART SM00487 20 221 2.6E-62 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VSVS12_03359 e4f6f4952b560df4096173ab45892186 517 Pfam PF00270 DEAD/DEAH box helicase 26 194 4.8E-51 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VSVS12_03359 e4f6f4952b560df4096173ab45892186 517 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 508 50.52 T 11-10-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 VSVS12_03359 e4f6f4952b560df4096173ab45892186 517 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 152 160 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VSVS12_00455 4bc19f953c2a1bcdaf381b27b2decaf9 289 SUPERFAMILY SSF52540 4 286 4.67E-47 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00455 4bc19f953c2a1bcdaf381b27b2decaf9 289 Gene3D G3DSA:3.40.50.300 1 289 1.2E-110 T 11-10-2018 VSVS12_00455 4bc19f953c2a1bcdaf381b27b2decaf9 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 1.5E-27 T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 VSVS12_00455 4bc19f953c2a1bcdaf381b27b2decaf9 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 1.5E-27 T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 VSVS12_00455 4bc19f953c2a1bcdaf381b27b2decaf9 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 1.5E-27 T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 VSVS12_00455 4bc19f953c2a1bcdaf381b27b2decaf9 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 1.5E-27 T 11-10-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 VSVS12_00455 4bc19f953c2a1bcdaf381b27b2decaf9 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 2.4E-69 T 11-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 VSVS12_00936 6de286b3f8c6b0c6d741c906db8582d9 367 SUPERFAMILY SSF56935 30 367 4.95E-38 T 11-10-2018 VSVS12_00936 6de286b3f8c6b0c6d741c906db8582d9 367 Gene3D G3DSA:2.40.160.10 30 367 7.2E-38 T 11-10-2018 IPR023614 Porin domain superfamily VSVS12_00936 6de286b3f8c6b0c6d741c906db8582d9 367 Pfam PF13609 Gram-negative porin 12 338 5.5E-30 T 11-10-2018 VSVS12_00832 3595b3082c3f684c9f650333dcacdd0c 199 PIRSF PIRSF006102 1 199 1.4E-64 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VSVS12_00832 3595b3082c3f684c9f650333dcacdd0c 199 TIGRFAM TIGR01940 nqrE: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit 3 198 4.0E-107 T 11-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VSVS12_00832 3595b3082c3f684c9f650333dcacdd0c 199 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 197 9.7E-59 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VSVS12_00832 3595b3082c3f684c9f650333dcacdd0c 199 Hamap MF_00429 Na(+)-translocating NADH-quinone reductase subunit E [nqrE]. 2 199 29.792 T 11-10-2018 IPR010967 Na(+)-translocating NADH-quinone reductase subunit E GO:0009276|GO:0016021|GO:0016655|GO:0022904|GO:0055114 VSVS12_02145 be5066cec57d3810269f5fafc684d7ed 139 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 11 127 7.4E-38 T 11-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 VSVS12_02145 be5066cec57d3810269f5fafc684d7ed 139 Gene3D G3DSA:3.10.129.10 2 138 2.1E-45 T 11-10-2018 VSVS12_02145 be5066cec57d3810269f5fafc684d7ed 139 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 8 131 4.7E-51 T 11-10-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 VSVS12_02145 be5066cec57d3810269f5fafc684d7ed 139 SUPERFAMILY SSF54637 5 131 2.65E-42 T 11-10-2018 IPR029069 HotDog domain superfamily VSVS12_02145 be5066cec57d3810269f5fafc684d7ed 139 PIRSF PIRSF003230 2 138 3.7E-48 T 11-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 VSVS12_02145 be5066cec57d3810269f5fafc684d7ed 139 Pfam PF03061 Thioesterase superfamily 22 106 1.5E-18 T 11-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 VSVS12_02342 8cd29043dac05c5a4bf4fd59c322ff4e 131 Pfam PF04241 Protein of unknown function (DUF423) 20 110 3.9E-30 T 11-10-2018 IPR006696 Protein of unknown function DUF423 VSVS12_03974 0d9c96381ee8aacfd720d1da696c45cd 669 SUPERFAMILY SSF56935 29 669 3.89E-90 T 11-10-2018 VSVS12_03974 0d9c96381ee8aacfd720d1da696c45cd 669 Gene3D G3DSA:2.170.130.10 41 148 1.9E-30 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VSVS12_03974 0d9c96381ee8aacfd720d1da696c45cd 669 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 47 669 9.9E-80 T 11-10-2018 IPR010105 TonB-dependent siderophore receptor GO:0005506|GO:0015891|GO:0038023 VSVS12_03974 0d9c96381ee8aacfd720d1da696c45cd 669 Gene3D G3DSA:2.40.170.20 150 669 1.7E-108 T 11-10-2018 IPR036942 TonB-dependent receptor-like, beta-barrel domain superfamily VSVS12_03974 0d9c96381ee8aacfd720d1da696c45cd 669 Pfam PF00593 TonB dependent receptor 233 667 1.5E-45 T 11-10-2018 IPR000531 TonB-dependent receptor-like, beta-barrel VSVS12_03974 0d9c96381ee8aacfd720d1da696c45cd 669 Pfam PF07715 TonB-dependent Receptor Plug Domain 44 136 8.8E-13 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain VSVS12_03305 93c55c773ae6fbeabefbec64db2b6060 400 TIGRFAM TIGR01767 MTRK: S-methyl-5-thioribose kinase 33 385 8.7E-86 T 11-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 VSVS12_03305 93c55c773ae6fbeabefbec64db2b6060 400 PIRSF PIRSF031134 1 398 4.4E-131 T 11-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 VSVS12_03305 93c55c773ae6fbeabefbec64db2b6060 400 Hamap MF_01683 Methylthioribose kinase [mtnK]. 1 400 130.362 T 11-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 VSVS12_03305 93c55c773ae6fbeabefbec64db2b6060 400 Gene3D G3DSA:3.90.1200.10 116 399 3.5E-87 T 11-10-2018 VSVS12_03305 93c55c773ae6fbeabefbec64db2b6060 400 SUPERFAMILY SSF56112 4 385 4.81E-68 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily VSVS12_03305 93c55c773ae6fbeabefbec64db2b6060 400 Gene3D G3DSA:3.30.200.20 2 114 9.3E-33 T 11-10-2018 VSVS12_03305 93c55c773ae6fbeabefbec64db2b6060 400 Pfam PF01636 Phosphotransferase enzyme family 222 270 1.6E-8 T 11-10-2018 IPR002575 Aminoglycoside phosphotransferase VSVS12_03105 2c76f28d5e2f16b36a7750675f6bb824 332 Pfam PF02653 Branched-chain amino acid transport system / permease component 43 315 9.4E-42 T 11-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 VSVS12_03042 36f216bd8e6f1ee5f800c6e535f86a93 196 Gene3D G3DSA:3.40.30.10 31 196 2.4E-37 T 11-10-2018 VSVS12_03042 36f216bd8e6f1ee5f800c6e535f86a93 196 SUPERFAMILY SSF52833 42 193 1.55E-36 T 11-10-2018 IPR036249 Thioredoxin-like superfamily VSVS12_03042 36f216bd8e6f1ee5f800c6e535f86a93 196 Pfam PF02630 SCO1/SenC 41 175 2.2E-32 T 11-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 VSVS12_01766 57982b4adf70af92b71716a938dc273b 106 Pfam PF13466 STAS domain 15 96 9.9E-11 T 11-10-2018 IPR002645 STAS domain VSVS12_01766 57982b4adf70af92b71716a938dc273b 106 Gene3D G3DSA:3.30.750.24 4 105 5.0E-17 T 11-10-2018 IPR036513 STAS domain superfamily VSVS12_01766 57982b4adf70af92b71716a938dc273b 106 SUPERFAMILY SSF52091 6 101 1.51E-18 T 11-10-2018 IPR036513 STAS domain superfamily VSVS12_02095 d94f3f0397bcbfae5a9787c0e99ae5fa 564 SUPERFAMILY SSF90123 5 304 8.5E-33 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VSVS12_02095 d94f3f0397bcbfae5a9787c0e99ae5fa 564 Gene3D G3DSA:3.40.50.300 315 563 4.5E-59 T 11-10-2018 VSVS12_02095 d94f3f0397bcbfae5a9787c0e99ae5fa 564 Gene3D G3DSA:1.20.1560.10 6 307 1.0E-26 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VSVS12_02095 d94f3f0397bcbfae5a9787c0e99ae5fa 564 Pfam PF00664 ABC transporter transmembrane region 23 278 1.6E-9 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VSVS12_02095 d94f3f0397bcbfae5a9787c0e99ae5fa 564 SUPERFAMILY SSF52540 311 549 4.71E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02095 d94f3f0397bcbfae5a9787c0e99ae5fa 564 Pfam PF00005 ABC transporter 340 488 9.8E-25 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_02095 d94f3f0397bcbfae5a9787c0e99ae5fa 564 SMART SM00382 349 536 3.3E-14 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_01903 1a1e8733a1348bd2ab5a2c2c1481f272 154 Gene3D G3DSA:3.40.630.30 1 151 9.2E-14 T 11-10-2018 VSVS12_01903 1a1e8733a1348bd2ab5a2c2c1481f272 154 Pfam PF00583 Acetyltransferase (GNAT) family 15 133 1.5E-7 T 11-10-2018 IPR000182 GNAT domain VSVS12_01903 1a1e8733a1348bd2ab5a2c2c1481f272 154 SUPERFAMILY SSF55729 1 151 1.03E-14 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_01088 493b6175173e9c53398c1a3116ffa4a1 383 PIRSF PIRSF001434 1 383 4.3E-139 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VSVS12_01088 493b6175173e9c53398c1a3116ffa4a1 383 SUPERFAMILY SSF53383 27 382 6.05E-114 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VSVS12_01088 493b6175173e9c53398c1a3116ffa4a1 383 Gene3D G3DSA:3.90.1150.10 250 383 1.0E-54 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VSVS12_01088 493b6175173e9c53398c1a3116ffa4a1 383 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 382 1.1E-137 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VSVS12_01088 493b6175173e9c53398c1a3116ffa4a1 383 Gene3D G3DSA:3.40.640.10 5 249 1.0E-83 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VSVS12_03096 9031d962cdcb5f75abc6575bd1cdab8b 470 PRINTS PR00131 Glycosyl hydrolase family 1 signature 295 309 3.0E-15 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VSVS12_03096 9031d962cdcb5f75abc6575bd1cdab8b 470 PRINTS PR00131 Glycosyl hydrolase family 1 signature 359 367 3.0E-15 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VSVS12_03096 9031d962cdcb5f75abc6575bd1cdab8b 470 PRINTS PR00131 Glycosyl hydrolase family 1 signature 426 438 3.0E-15 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VSVS12_03096 9031d962cdcb5f75abc6575bd1cdab8b 470 PRINTS PR00131 Glycosyl hydrolase family 1 signature 401 418 3.0E-15 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VSVS12_03096 9031d962cdcb5f75abc6575bd1cdab8b 470 PRINTS PR00131 Glycosyl hydrolase family 1 signature 380 391 3.0E-15 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VSVS12_03096 9031d962cdcb5f75abc6575bd1cdab8b 470 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 359 367 - T 11-10-2018 IPR018120 Glycoside hydrolase family 1, active site VSVS12_03096 9031d962cdcb5f75abc6575bd1cdab8b 470 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 11 25 - T 11-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site VSVS12_03096 9031d962cdcb5f75abc6575bd1cdab8b 470 Gene3D G3DSA:3.20.20.80 1 463 1.1E-148 T 11-10-2018 VSVS12_03096 9031d962cdcb5f75abc6575bd1cdab8b 470 Pfam PF00232 Glycosyl hydrolase family 1 5 461 3.4E-145 T 11-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 VSVS12_03096 9031d962cdcb5f75abc6575bd1cdab8b 470 SUPERFAMILY SSF51445 3 458 2.41E-155 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily VSVS12_03306 09710437c6aa895e2e3ef3bcbffb6da0 448 Pfam PF03553 Na+/H+ antiporter family 26 221 7.1E-12 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VSVS12_04363 dd165a7f438fb8c8c048b0c0d50da658 316 PIRSF PIRSF037004 1 316 2.6E-134 T 11-10-2018 IPR017087 Uncharacterised conserved protein UCP037004 VSVS12_04363 dd165a7f438fb8c8c048b0c0d50da658 316 Pfam PF04463 Protein of unknown function (DUF523) 7 148 5.4E-37 T 11-10-2018 IPR007553 Domain of unknown function DUF523 VSVS12_04363 dd165a7f438fb8c8c048b0c0d50da658 316 Pfam PF08349 Protein of unknown function (DUF1722) 191 307 2.3E-44 T 11-10-2018 IPR013560 Domain of unknown function DUF1722 VSVS12_04167 f654679b3cbbf56dab6f366271abc712 303 SUPERFAMILY SSF103481 46 143 7.32E-6 T 11-10-2018 VSVS12_04167 f654679b3cbbf56dab6f366271abc712 303 Pfam PF00892 EamA-like transporter family 161 288 8.7E-11 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VSVS12_04167 f654679b3cbbf56dab6f366271abc712 303 SUPERFAMILY SSF103481 214 293 8.11E-8 T 11-10-2018 VSVS12_02836 12d149147e182ed6a65a745bd04b1ebb 253 Pfam PF04402 Protein of unknown function (DUF541) 52 249 3.4E-41 T 11-10-2018 IPR007497 Protein of unknown function DUF541 VSVS12_02836 12d149147e182ed6a65a745bd04b1ebb 253 Gene3D G3DSA:3.30.70.2970 63 170 1.7E-50 T 11-10-2018 VSVS12_02836 12d149147e182ed6a65a745bd04b1ebb 253 Gene3D G3DSA:3.30.110.170 53 249 1.7E-50 T 11-10-2018 VSVS12_00509 818c40ca5b99bbdfdbdee8105738f6ee 205 Gene3D G3DSA:3.40.50.300 9 205 5.2E-80 T 11-10-2018 VSVS12_00509 818c40ca5b99bbdfdbdee8105738f6ee 205 Pfam PF01583 Adenylylsulphate kinase 32 181 5.9E-70 T 11-10-2018 VSVS12_00509 818c40ca5b99bbdfdbdee8105738f6ee 205 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 14 197 7.6E-81 T 11-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 VSVS12_00509 818c40ca5b99bbdfdbdee8105738f6ee 205 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 30 202 37.691 T 11-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 VSVS12_00509 818c40ca5b99bbdfdbdee8105738f6ee 205 SUPERFAMILY SSF52540 26 201 2.83E-39 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00437 d97b452cd21a8805d10cd59dfcdf7c14 200 Pfam PF05137 Fimbrial assembly protein (PilN) 101 177 1.6E-7 T 11-10-2018 IPR007813 Fimbrial assembly PilN VSVS12_00657 74bf76050158a0e2a18aa4e7039f268c 367 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 343 3.1E-69 T 11-10-2018 IPR005495 Permease LptG/LptF-related GO:0016021 VSVS12_00657 74bf76050158a0e2a18aa4e7039f268c 367 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 345 3.5E-116 T 11-10-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 VSVS12_04343 df64516734583ede56e48ee60e9ce287 366 Pfam PF12698 ABC-2 family transporter protein 25 357 3.5E-44 T 11-10-2018 VSVS12_04343 df64516734583ede56e48ee60e9ce287 366 PRINTS PR00164 ABC-2 type transport system membrane protein signature 288 307 1.3E-6 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VSVS12_04343 df64516734583ede56e48ee60e9ce287 366 PRINTS PR00164 ABC-2 type transport system membrane protein signature 308 327 1.3E-6 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VSVS12_04343 df64516734583ede56e48ee60e9ce287 366 PRINTS PR00164 ABC-2 type transport system membrane protein signature 251 275 1.3E-6 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VSVS12_02476 3ba5cc7319616f90ac4ca912c35325fc 501 PIRSF PIRSF001267 1 501 6.9E-189 T 11-10-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 VSVS12_02476 3ba5cc7319616f90ac4ca912c35325fc 501 Pfam PF02541 Ppx/GppA phosphatase family 23 304 8.2E-83 T 11-10-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 VSVS12_02476 3ba5cc7319616f90ac4ca912c35325fc 501 Gene3D G3DSA:3.30.420.40 11 300 3.1E-85 T 11-10-2018 VSVS12_02476 3ba5cc7319616f90ac4ca912c35325fc 501 SUPERFAMILY SSF53067 10 130 5.83E-36 T 11-10-2018 VSVS12_02476 3ba5cc7319616f90ac4ca912c35325fc 501 SUPERFAMILY SSF53067 134 306 1.81E-41 T 11-10-2018 VSVS12_02476 3ba5cc7319616f90ac4ca912c35325fc 501 Gene3D G3DSA:1.10.3210.10 307 501 4.1E-54 T 11-10-2018 VSVS12_02476 3ba5cc7319616f90ac4ca912c35325fc 501 Gene3D G3DSA:3.30.420.150 114 292 3.1E-85 T 11-10-2018 VSVS12_02476 3ba5cc7319616f90ac4ca912c35325fc 501 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 10 303 1.3E-94 T 11-10-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 VSVS12_02476 3ba5cc7319616f90ac4ca912c35325fc 501 SUPERFAMILY SSF109604 310 500 2.04E-41 T 11-10-2018 VSVS12_04471 d71b15bdbae78629a8a0831edc8fbff3 418 Pfam PF13614 AAA domain 118 312 1.3E-21 T 11-10-2018 IPR025669 AAA domain VSVS12_04471 d71b15bdbae78629a8a0831edc8fbff3 418 Gene3D G3DSA:3.40.50.300 117 417 4.7E-55 T 11-10-2018 VSVS12_04471 d71b15bdbae78629a8a0831edc8fbff3 418 SUPERFAMILY SSF52540 119 383 1.06E-30 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03149 508a6a6502c47d4f4ae702d45b592c0b 303 Gene3D G3DSA:3.40.50.10190 202 300 4.7E-11 T 11-10-2018 IPR036420 BRCT domain superfamily VSVS12_01109 43a1ec41daafb626168b3501ba28d0f6 447 SUPERFAMILY SSF47226 336 443 1.01E-16 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 VSVS12_01109 43a1ec41daafb626168b3501ba28d0f6 447 Pfam PF01627 Hpt domain 358 418 7.8E-10 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VSVS12_01109 43a1ec41daafb626168b3501ba28d0f6 447 SMART SM00073 347 443 9.5E-5 T 11-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 VSVS12_01109 43a1ec41daafb626168b3501ba28d0f6 447 Gene3D G3DSA:1.20.120.160 337 445 1.4E-16 T 11-10-2018 IPR036641 HPT domain superfamily GO:0000160 VSVS12_00079 ddcf5122bd2d28bad0101b179404beec 680 Gene3D G3DSA:1.10.1370.40 13 675 3.5E-269 T 11-10-2018 VSVS12_00079 ddcf5122bd2d28bad0101b179404beec 680 SUPERFAMILY SSF55486 1 677 8.55E-210 T 11-10-2018 VSVS12_00079 ddcf5122bd2d28bad0101b179404beec 680 Gene3D G3DSA:1.10.1370.10 140 610 3.5E-269 T 11-10-2018 IPR024077 Neurolysin/Thimet oligopeptidase, domain 2 VSVS12_00079 ddcf5122bd2d28bad0101b179404beec 680 Pfam PF01432 Peptidase family M3 222 677 5.2E-164 T 11-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 VSVS12_02438 32a86e268b62f4e1d1312a68a43cf4c3 515 Pfam PF01235 Sodium:alanine symporter family 51 472 3.3E-150 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VSVS12_02438 32a86e268b62f4e1d1312a68a43cf4c3 515 PRINTS PR00175 Sodium/alanine symporter signature 86 108 2.7E-56 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VSVS12_02438 32a86e268b62f4e1d1312a68a43cf4c3 515 PRINTS PR00175 Sodium/alanine symporter signature 217 236 2.7E-56 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VSVS12_02438 32a86e268b62f4e1d1312a68a43cf4c3 515 PRINTS PR00175 Sodium/alanine symporter signature 304 322 2.7E-56 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VSVS12_02438 32a86e268b62f4e1d1312a68a43cf4c3 515 PRINTS PR00175 Sodium/alanine symporter signature 189 207 2.7E-56 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VSVS12_02438 32a86e268b62f4e1d1312a68a43cf4c3 515 PRINTS PR00175 Sodium/alanine symporter signature 365 387 2.7E-56 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VSVS12_02438 32a86e268b62f4e1d1312a68a43cf4c3 515 PRINTS PR00175 Sodium/alanine symporter signature 428 448 2.7E-56 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VSVS12_02438 32a86e268b62f4e1d1312a68a43cf4c3 515 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 86 101 - T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VSVS12_02438 32a86e268b62f4e1d1312a68a43cf4c3 515 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 462 1.3E-135 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VSVS12_00508 2d45bf0ac173da852085dbd9cdd9fcf1 574 Pfam PF02080 TrkA-C domain 209 278 2.4E-13 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VSVS12_00508 2d45bf0ac173da852085dbd9cdd9fcf1 574 Pfam PF02080 TrkA-C domain 293 349 1.3E-10 T 11-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 VSVS12_00508 2d45bf0ac173da852085dbd9cdd9fcf1 574 SUPERFAMILY SSF116726 205 283 2.09E-17 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VSVS12_00508 2d45bf0ac173da852085dbd9cdd9fcf1 574 SUPERFAMILY SSF116726 290 349 2.62E-13 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VSVS12_00508 2d45bf0ac173da852085dbd9cdd9fcf1 574 Pfam PF03600 Citrate transporter 28 518 1.6E-23 T 11-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 VSVS12_00508 2d45bf0ac173da852085dbd9cdd9fcf1 574 Gene3D G3DSA:3.30.70.1450 290 360 1.2E-11 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VSVS12_00508 2d45bf0ac173da852085dbd9cdd9fcf1 574 Gene3D G3DSA:3.30.70.1450 206 285 8.1E-15 T 11-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 VSVS12_04237 f43da6fb7aabbcaf69ac27e68e5c6f9f 204 SUPERFAMILY SSF56529 11 187 1.22E-45 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VSVS12_04237 f43da6fb7aabbcaf69ac27e68e5c6f9f 204 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 15 185 2.2E-28 T 11-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 VSVS12_04237 f43da6fb7aabbcaf69ac27e68e5c6f9f 204 Gene3D G3DSA:3.90.850.10 9 204 4.6E-49 T 11-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 VSVS12_02520 985edd00cbe85354612f397423dfddfc 124 Pfam PF01478 Type IV leader peptidase family 8 105 6.7E-7 T 11-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 VSVS12_00161 5a2316fc1b13adb4f26e0d99eca2bbcc 258 Gene3D G3DSA:3.40.50.720 2 254 1.5E-79 T 11-10-2018 VSVS12_00161 5a2316fc1b13adb4f26e0d99eca2bbcc 258 Pfam PF00899 ThiF family 10 246 3.8E-58 T 11-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 VSVS12_00161 5a2316fc1b13adb4f26e0d99eca2bbcc 258 SUPERFAMILY SSF69572 3 248 6.28E-69 T 11-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 VSVS12_02332 aeaf58bb86cc2f2eab3aae57a75c70cf 62 Pfam PF11446 Protein of unknown function (DUF2897) 4 53 8.7E-19 T 11-10-2018 IPR021550 Protein of unknown function DUF2897 VSVS12_01705 5233cb17fac9064b60e6e54a3ae677f7 202 Pfam PF13247 4Fe-4S dicluster domain 54 125 1.2E-9 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VSVS12_01705 5233cb17fac9064b60e6e54a3ae677f7 202 Gene3D G3DSA:3.30.70.20 42 189 2.7E-33 T 11-10-2018 VSVS12_01705 5233cb17fac9064b60e6e54a3ae677f7 202 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VSVS12_01705 5233cb17fac9064b60e6e54a3ae677f7 202 SUPERFAMILY SSF54862 1 183 1.67E-48 T 11-10-2018 VSVS12_01597 dcb96ef7da85352f1ca6214c1f025fd7 295 Gene3D G3DSA:3.40.140.10 29 179 2.8E-44 T 11-10-2018 VSVS12_01597 dcb96ef7da85352f1ca6214c1f025fd7 295 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 277 1.1E-38 T 11-10-2018 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 VSVS12_01597 dcb96ef7da85352f1ca6214c1f025fd7 295 Hamap MF_01558 Cytidine deaminase [cdd]. 1 293 48.167 T 11-10-2018 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 VSVS12_01597 dcb96ef7da85352f1ca6214c1f025fd7 295 PIRSF PIRSF006334 14 295 9.2E-101 T 11-10-2018 VSVS12_01597 dcb96ef7da85352f1ca6214c1f025fd7 295 SUPERFAMILY SSF53927 152 284 1.07E-32 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VSVS12_01597 dcb96ef7da85352f1ca6214c1f025fd7 295 Gene3D G3DSA:3.40.140.10 180 295 1.9E-24 T 11-10-2018 VSVS12_01597 dcb96ef7da85352f1ca6214c1f025fd7 295 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 11-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 VSVS12_01597 dcb96ef7da85352f1ca6214c1f025fd7 295 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 29 294 3.4E-93 T 11-10-2018 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 VSVS12_01597 dcb96ef7da85352f1ca6214c1f025fd7 295 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 60 141 1.5E-12 T 11-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain VSVS12_01597 dcb96ef7da85352f1ca6214c1f025fd7 295 SUPERFAMILY SSF53927 1 146 2.17E-41 T 11-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 VSVS12_01087 f99a259f0d3b6b18b50b3fa6ea50b09f 478 Pfam PF03553 Na+/H+ antiporter family 168 474 8.1E-48 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VSVS12_03378 98a3b2ba2549715fcc3c79d4473a509a 309 Gene3D G3DSA:2.170.130.10 34 165 2.0E-29 T 11-10-2018 IPR037066 TonB-dependent receptor, plug domain superfamily VSVS12_03378 98a3b2ba2549715fcc3c79d4473a509a 309 SUPERFAMILY SSF56935 42 299 1.37E-42 T 11-10-2018 VSVS12_03378 98a3b2ba2549715fcc3c79d4473a509a 309 Pfam PF07715 TonB-dependent Receptor Plug Domain 51 160 5.0E-21 T 11-10-2018 IPR012910 TonB-dependent receptor, plug domain VSVS12_03849 2279edd353ca6db81f93c6b39e24b14a 687 Gene3D G3DSA:3.40.50.300 506 681 1.7E-29 T 11-10-2018 VSVS12_03849 2279edd353ca6db81f93c6b39e24b14a 687 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 1 166 5.4E-47 T 11-10-2018 IPR022161 DNA helicase IV, N-terminal domain VSVS12_03849 2279edd353ca6db81f93c6b39e24b14a 687 SUPERFAMILY SSF52540 198 680 3.1E-85 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03849 2279edd353ca6db81f93c6b39e24b14a 687 Pfam PF00580 UvrD/REP helicase N-terminal domain 201 497 1.6E-43 T 11-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 VSVS12_03849 2279edd353ca6db81f93c6b39e24b14a 687 Pfam PF13361 UvrD-like helicase C-terminal domain 594 667 5.6E-18 T 11-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 VSVS12_03849 2279edd353ca6db81f93c6b39e24b14a 687 Gene3D G3DSA:1.10.10.160 302 416 8.3E-52 T 11-10-2018 IPR013986 DExx box DNA helicase domain superfamily VSVS12_03849 2279edd353ca6db81f93c6b39e24b14a 687 Gene3D G3DSA:3.40.50.300 200 499 8.3E-52 T 11-10-2018 VSVS12_03783 082221182b746cbb0517a40f8929aa99 275 Gene3D G3DSA:3.90.25.10 193 274 2.1E-114 T 11-10-2018 VSVS12_03783 082221182b746cbb0517a40f8929aa99 275 Gene3D G3DSA:3.40.50.720 3 273 2.1E-114 T 11-10-2018 VSVS12_03783 082221182b746cbb0517a40f8929aa99 275 SUPERFAMILY SSF51735 1 274 6.22E-78 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_03783 082221182b746cbb0517a40f8929aa99 275 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 274 6.9E-116 T 11-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 VSVS12_03783 082221182b746cbb0517a40f8929aa99 275 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 261 4.6E-52 T 11-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 VSVS12_04140 417e00ea98f5772d3ee2d5b8f876f0f4 519 Pfam PF10129 OpgC protein 3 360 2.8E-73 T 11-10-2018 IPR014550 Uncharacterised conserved protein UCP028704, OpgC VSVS12_04140 417e00ea98f5772d3ee2d5b8f876f0f4 519 Pfam PF09912 Uncharacterized protein conserved in bacteria (DUF2141) 407 511 8.9E-20 T 11-10-2018 IPR018673 Protein of unknown function DUF2141 VSVS12_03985 6c028e5ea2e17bf8787073ad038f7888 362 Gene3D G3DSA:1.10.3720.10 121 352 2.3E-20 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_03985 6c028e5ea2e17bf8787073ad038f7888 362 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 150 357 6.7E-35 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VSVS12_03985 6c028e5ea2e17bf8787073ad038f7888 362 SUPERFAMILY SSF161098 126 344 7.98E-17 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_04286 d6f84fe6813a0b7ae243abb868c7182e 173 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 5 173 7.1E-59 T 11-10-2018 IPR018636 Protein of unknown function DUF2058 VSVS12_03039 dee7b43ad22e5e07f292a16ab32eb654 212 Hamap MF_00789 UPF0319 protein YccT [yccT]. 3 211 25.747 T 11-10-2018 IPR018635 Uncharacterised protein family UPF0319 VSVS12_03039 dee7b43ad22e5e07f292a16ab32eb654 212 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 22 207 3.0E-48 T 11-10-2018 IPR018635 Uncharacterised protein family UPF0319 VSVS12_00339 11665f1a76165948e48a47de3d6689db 237 Gene3D G3DSA:1.10.510.10 139 237 1.1E-15 T 11-10-2018 VSVS12_00339 11665f1a76165948e48a47de3d6689db 237 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 30 232 2.8E-65 T 11-10-2018 VSVS12_00339 11665f1a76165948e48a47de3d6689db 237 SUPERFAMILY SSF56112 74 234 2.97E-17 T 11-10-2018 IPR011009 Protein kinase-like domain superfamily VSVS12_00339 11665f1a76165948e48a47de3d6689db 237 Hamap MF_00521 3-deoxy-D-manno-octulosonic acid kinase [kdkA]. 1 234 40.816 T 11-10-2018 IPR022826 3-deoxy-D-manno-octulosonic acid kinase GO:0016773 KEGG: 00540+2.7.1.166|MetaCyc: PWY-7675|MetaCyc: PWY-7676 VSVS12_03453 a54024469b09aec3045449844ae39ab1 77 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 2 75 3.0E-13 T 11-10-2018 IPR000160 GGDEF domain VSVS12_03453 a54024469b09aec3045449844ae39ab1 77 Pfam PF00990 Diguanylate cyclase, GGDEF domain 2 72 3.9E-11 T 11-10-2018 IPR000160 GGDEF domain VSVS12_03453 a54024469b09aec3045449844ae39ab1 77 Gene3D G3DSA:3.30.70.270 1 77 5.5E-19 T 11-10-2018 VSVS12_03453 a54024469b09aec3045449844ae39ab1 77 SUPERFAMILY SSF55073 2 75 5.26E-17 T 11-10-2018 IPR029787 Nucleotide cyclase VSVS12_02635 5d6b0daae2b0a7b550a913bc352b4d91 203 Gene3D G3DSA:2.30.30.40 29 86 6.3E-9 T 11-10-2018 VSVS12_02635 5d6b0daae2b0a7b550a913bc352b4d91 203 Pfam PF08239 Bacterial SH3 domain 32 82 1.2E-8 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type VSVS12_02635 5d6b0daae2b0a7b550a913bc352b4d91 203 PIRSF PIRSF006158 1 203 8.0E-66 T 11-10-2018 IPR016476 SH3 domain protein VSVS12_02635 5d6b0daae2b0a7b550a913bc352b4d91 203 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 24 202 8.1E-48 T 11-10-2018 IPR016476 SH3 domain protein VSVS12_02635 5d6b0daae2b0a7b550a913bc352b4d91 203 SMART SM00287 20 86 1.3E-8 T 11-10-2018 IPR003646 SH3-like domain, bacterial-type VSVS12_04210 fd0cd2d404ca6176ca2c9cf303fe3f2b 431 Pfam PF00589 Phage integrase family 232 409 2.4E-12 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VSVS12_04210 fd0cd2d404ca6176ca2c9cf303fe3f2b 431 Gene3D G3DSA:1.10.150.130 120 225 5.7E-12 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal VSVS12_04210 fd0cd2d404ca6176ca2c9cf303fe3f2b 431 SUPERFAMILY SSF56349 126 418 1.8E-37 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VSVS12_04210 fd0cd2d404ca6176ca2c9cf303fe3f2b 431 Gene3D G3DSA:1.10.443.10 231 421 2.1E-20 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VSVS12_00775 8d3fb58d4a89fa92148d185613617b07 123 Gene3D G3DSA:2.40.10.220 1 121 3.7E-31 T 11-10-2018 VSVS12_00775 8d3fb58d4a89fa92148d185613617b07 123 PIRSF PIRSF028141 1 120 7.4E-38 T 11-10-2018 IPR027021 Cyclic di-GMP binding protein, PA4608 type VSVS12_00775 8d3fb58d4a89fa92148d185613617b07 123 Pfam PF07238 PilZ domain 3 100 4.8E-12 T 11-10-2018 IPR009875 PilZ domain GO:0035438 VSVS12_00775 8d3fb58d4a89fa92148d185613617b07 123 SUPERFAMILY SSF141371 1 119 6.47E-30 T 11-10-2018 VSVS12_02052 828da645c932e2eb7474e916d5af8ac8 295 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 65 1.9E-14 T 11-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain VSVS12_02052 828da645c932e2eb7474e916d5af8ac8 295 SUPERFAMILY SSF161098 89 276 5.76E-23 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_02052 828da645c932e2eb7474e916d5af8ac8 295 Gene3D G3DSA:1.10.3720.10 84 291 1.1E-18 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_02052 828da645c932e2eb7474e916d5af8ac8 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 293 3.2E-21 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VSVS12_01383 3e48c34d1930f648cec1821e7ba33001 225 SUPERFAMILY SSF161098 12 203 4.19E-40 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_01383 3e48c34d1930f648cec1821e7ba33001 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 112 8.5E-22 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VSVS12_01383 3e48c34d1930f648cec1821e7ba33001 225 Gene3D G3DSA:1.10.3720.10 1 218 1.6E-47 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_01383 3e48c34d1930f648cec1821e7ba33001 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 46 217 1.6E-19 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VSVS12_00684 e96131b8f34394b57d3622c96c931eaa 239 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 237 56.02 T 11-10-2018 IPR005224 Sugar fermentation stimulation protein VSVS12_00684 e96131b8f34394b57d3622c96c931eaa 239 Gene3D G3DSA:3.40.1350.60 81 236 8.5E-54 T 11-10-2018 VSVS12_00684 e96131b8f34394b57d3622c96c931eaa 239 Gene3D G3DSA:2.40.50.580 1 80 2.6E-28 T 11-10-2018 VSVS12_00684 e96131b8f34394b57d3622c96c931eaa 239 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 1 228 4.4E-74 T 11-10-2018 IPR005224 Sugar fermentation stimulation protein VSVS12_00684 e96131b8f34394b57d3622c96c931eaa 239 Pfam PF03749 Sugar fermentation stimulation protein 13 229 1.0E-74 T 11-10-2018 IPR005224 Sugar fermentation stimulation protein VSVS12_00192 860051be330062022bae6275c926e435 270 SUPERFAMILY SSF81336 93 262 1.07E-49 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VSVS12_00192 860051be330062022bae6275c926e435 270 Pfam PF00119 ATP synthase A chain 44 262 1.0E-57 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VSVS12_00192 860051be330062022bae6275c926e435 270 Gene3D G3DSA:1.20.120.220 92 268 2.4E-66 T 11-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VSVS12_00192 860051be330062022bae6275c926e435 270 Hamap MF_01393 ATP synthase subunit a [atpB]. 14 268 15.197 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VSVS12_00192 860051be330062022bae6275c926e435 270 ProSitePatterns PS00449 ATP synthase a subunit signature. 203 212 - T 11-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VSVS12_00192 860051be330062022bae6275c926e435 270 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 35 263 4.3E-45 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VSVS12_00192 860051be330062022bae6275c926e435 270 PRINTS PR00123 ATP synthase A subunit signature 200 222 2.3E-13 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VSVS12_00192 860051be330062022bae6275c926e435 270 PRINTS PR00123 ATP synthase A subunit signature 101 117 2.3E-13 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VSVS12_00192 860051be330062022bae6275c926e435 270 PRINTS PR00123 ATP synthase A subunit signature 248 263 2.3E-13 T 11-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 VSVS12_00937 4d2919e40cb51de2e9cebef46c8f210a 210 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 22 206 2.4E-32 T 11-10-2018 IPR018635 Uncharacterised protein family UPF0319 VSVS12_01497 5d3734418760c04f52e82383ae0ae7fe 332 Pfam PF11059 Protein of unknown function (DUF2860) 27 331 2.3E-90 T 11-10-2018 IPR016896 Protein of unknown function DUF2860 VSVS12_01497 5d3734418760c04f52e82383ae0ae7fe 332 PIRSF PIRSF028696 1 332 1.9E-90 T 11-10-2018 IPR016896 Protein of unknown function DUF2860 VSVS12_01329 4265a02a9bc547dddfd3cc681bec224c 194 SUPERFAMILY SSF89155 4 189 1.96E-42 T 11-10-2018 IPR036411 TorD-like superfamily VSVS12_01329 4265a02a9bc547dddfd3cc681bec224c 194 Gene3D G3DSA:1.10.3480.10 2 189 5.3E-39 T 11-10-2018 VSVS12_01329 4265a02a9bc547dddfd3cc681bec224c 194 Pfam PF02613 Nitrate reductase delta subunit 31 146 6.6E-20 T 11-10-2018 IPR020945 DMSO/Nitrate reductase chaperone VSVS12_01329 4265a02a9bc547dddfd3cc681bec224c 194 PIRSF PIRSF004690 1 185 2.0E-37 T 11-10-2018 IPR026269 Tat proofreading chaperone DmsD-type VSVS12_01163 8ad0ead6dd20f57e27811c8eb04be9b1 450 SUPERFAMILY SSF53067 207 445 4.23E-28 T 11-10-2018 VSVS12_01163 8ad0ead6dd20f57e27811c8eb04be9b1 450 SUPERFAMILY SSF53067 2 204 5.18E-24 T 11-10-2018 VSVS12_01163 8ad0ead6dd20f57e27811c8eb04be9b1 450 Gene3D G3DSA:3.30.420.40 385 428 8.4E-9 T 11-10-2018 VSVS12_01163 8ad0ead6dd20f57e27811c8eb04be9b1 450 Gene3D G3DSA:3.90.640.10 337 384 8.4E-9 T 11-10-2018 VSVS12_01163 8ad0ead6dd20f57e27811c8eb04be9b1 450 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 213 226 - T 11-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 VSVS12_01163 8ad0ead6dd20f57e27811c8eb04be9b1 450 Pfam PF00012 Hsp70 protein 129 268 7.8E-9 T 11-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 VSVS12_03316 935b4b72c02d1cd7884d7c8403ff0859 105 SUPERFAMILY SSF47413 6 60 3.94E-10 T 11-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 VSVS12_03316 935b4b72c02d1cd7884d7c8403ff0859 105 SMART SM00530 8 63 1.8E-7 T 11-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 VSVS12_03316 935b4b72c02d1cd7884d7c8403ff0859 105 Pfam PF13560 Helix-turn-helix domain 9 63 7.7E-9 T 11-10-2018 VSVS12_03316 935b4b72c02d1cd7884d7c8403ff0859 105 Gene3D G3DSA:1.10.260.40 9 65 1.2E-9 T 11-10-2018 VSVS12_03765 19e6517559939e398039018b4b06a374 156 PIRSF PIRSF003174 1 155 2.2E-49 T 11-10-2018 IPR010292 Uncharacterised protein family CreA VSVS12_03765 19e6517559939e398039018b4b06a374 156 Pfam PF05981 CreA protein 23 145 3.8E-44 T 11-10-2018 IPR010292 Uncharacterised protein family CreA VSVS12_00211 df7db50741cd1a8984b80a4a62462744 145 Pfam PF00011 Hsp20/alpha crystallin family 43 136 3.9E-19 T 11-10-2018 IPR002068 Alpha crystallin/Hsp20 domain VSVS12_00211 df7db50741cd1a8984b80a4a62462744 145 SUPERFAMILY SSF49764 6 137 5.58E-23 T 11-10-2018 IPR008978 HSP20-like chaperone VSVS12_00211 df7db50741cd1a8984b80a4a62462744 145 Gene3D G3DSA:2.60.40.790 34 137 1.0E-22 T 11-10-2018 IPR008978 HSP20-like chaperone VSVS12_01530 a06a15841a8d029e8aff77faed77c9c2 209 Pfam PF01810 LysE type translocator 14 208 9.7E-33 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VSVS12_01530 a06a15841a8d029e8aff77faed77c9c2 209 PIRSF PIRSF006324 1 209 2.1E-53 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VSVS12_03777 843033b8dd8c5b1e2d56780807a9a7f9 220 SMART SM00382 30 215 5.2E-12 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_03777 843033b8dd8c5b1e2d56780807a9a7f9 220 Gene3D G3DSA:3.40.50.300 1 219 5.2E-69 T 11-10-2018 VSVS12_03777 843033b8dd8c5b1e2d56780807a9a7f9 220 SUPERFAMILY SSF52540 2 217 1.44E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03777 843033b8dd8c5b1e2d56780807a9a7f9 220 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_03777 843033b8dd8c5b1e2d56780807a9a7f9 220 Pfam PF00005 ABC transporter 21 167 4.0E-35 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_00569 3f878a9d6acb50331ad5738ad59e1b88 306 Hamap MF_00313 Glutaminase [glsA]. 4 306 47.101 T 11-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 VSVS12_00569 3f878a9d6acb50331ad5738ad59e1b88 306 Pfam PF04960 Glutaminase 22 306 4.5E-112 T 11-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 VSVS12_00569 3f878a9d6acb50331ad5738ad59e1b88 306 Gene3D G3DSA:3.40.710.10 2 306 9.1E-109 T 11-10-2018 VSVS12_00569 3f878a9d6acb50331ad5738ad59e1b88 306 TIGRFAM TIGR03814 Gln_ase: glutaminase A 8 306 4.0E-130 T 11-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 VSVS12_00569 3f878a9d6acb50331ad5738ad59e1b88 306 SUPERFAMILY SSF56601 5 306 8.03E-114 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VSVS12_01616 1721288a7a288a62f375cabce769b07f 402 Gene3D G3DSA:1.20.1250.20 4 391 8.4E-52 T 11-10-2018 VSVS12_01616 1721288a7a288a62f375cabce769b07f 402 Pfam PF07690 Major Facilitator Superfamily 16 352 3.1E-42 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VSVS12_01616 1721288a7a288a62f375cabce769b07f 402 SUPERFAMILY SSF103473 8 392 3.4E-60 T 11-10-2018 IPR036259 MFS transporter superfamily VSVS12_04545 d406d7e04b3cd6ef263a6b711327436c 213 SUPERFAMILY SSF51658 3 209 4.19E-36 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily VSVS12_04545 d406d7e04b3cd6ef263a6b711327436c 213 Gene3D G3DSA:3.20.20.150 2 211 2.3E-48 T 11-10-2018 VSVS12_04545 d406d7e04b3cd6ef263a6b711327436c 213 Pfam PF01261 Xylose isomerase-like TIM barrel 28 209 2.1E-25 T 11-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain VSVS12_01260 baf373b1bd35283912d3568e18c91e21 315 Pfam PF01584 CheW-like domain 21 160 4.1E-35 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VSVS12_01260 baf373b1bd35283912d3568e18c91e21 315 Gene3D G3DSA:2.30.30.40 24 152 5.1E-28 T 11-10-2018 VSVS12_01260 baf373b1bd35283912d3568e18c91e21 315 SUPERFAMILY SSF52172 183 310 9.39E-23 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_01260 baf373b1bd35283912d3568e18c91e21 315 SMART SM00448 184 305 2.6E-16 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_01260 baf373b1bd35283912d3568e18c91e21 315 Gene3D G3DSA:2.40.50.180 39 158 5.1E-28 T 11-10-2018 VSVS12_01260 baf373b1bd35283912d3568e18c91e21 315 Pfam PF00072 Response regulator receiver domain 186 303 2.1E-15 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_01260 baf373b1bd35283912d3568e18c91e21 315 PIRSF PIRSF002867 1 312 8.9E-103 T 11-10-2018 IPR024181 Chemotaxis response regulator CheV VSVS12_01260 baf373b1bd35283912d3568e18c91e21 315 Gene3D G3DSA:3.40.50.2300 183 311 1.8E-22 T 11-10-2018 VSVS12_01260 baf373b1bd35283912d3568e18c91e21 315 SMART SM00260 17 158 2.7E-30 T 11-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 VSVS12_01260 baf373b1bd35283912d3568e18c91e21 315 SUPERFAMILY SSF50341 16 161 1.28E-33 T 11-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 VSVS12_00910 a0e3b3e25fc648ed7ec7b5d76f5c0508 217 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 26 202 3.5E-72 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VSVS12_00910 a0e3b3e25fc648ed7ec7b5d76f5c0508 217 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 74 127 5.0E-23 T 11-10-2018 VSVS12_00910 a0e3b3e25fc648ed7ec7b5d76f5c0508 217 PIRSF PIRSF016262 1 216 1.2E-61 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VSVS12_00910 a0e3b3e25fc648ed7ec7b5d76f5c0508 217 Hamap MF_00013 Octanoyltransferase [lipB]. 4 205 37.59 T 11-10-2018 IPR000544 Octanoyltransferase GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 VSVS12_00910 a0e3b3e25fc648ed7ec7b5d76f5c0508 217 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 70 85 - T 11-10-2018 IPR020605 Octanoyltransferase, conserved site GO:0009249|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 VSVS12_00910 a0e3b3e25fc648ed7ec7b5d76f5c0508 217 SUPERFAMILY SSF55681 4 205 3.55E-69 T 11-10-2018 VSVS12_00910 a0e3b3e25fc648ed7ec7b5d76f5c0508 217 Pfam PF03099 Biotin/lipoate A/B protein ligase family 58 158 9.9E-8 T 11-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 VSVS12_00910 a0e3b3e25fc648ed7ec7b5d76f5c0508 217 Gene3D G3DSA:3.30.930.10 1 203 2.3E-62 T 11-10-2018 VSVS12_04575 adc93d45666619b795ac95c66b2ed45d 119 SUPERFAMILY SSF53639 10 98 3.92E-29 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily VSVS12_04575 adc93d45666619b795ac95c66b2ed45d 119 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 15 97 4.1E-23 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal VSVS12_04575 adc93d45666619b795ac95c66b2ed45d 119 SMART SM01007 14 118 4.0E-4 T 11-10-2018 IPR001303 Class II aldolase/adducin N-terminal VSVS12_04575 adc93d45666619b795ac95c66b2ed45d 119 Gene3D G3DSA:3.40.225.10 5 115 3.9E-30 T 11-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily VSVS12_03215 885c1c1c190d18e2fc8de91e14a4abe2 332 Pfam PF03864 Phage major capsid protein E 18 327 9.6E-26 T 11-10-2018 IPR005564 Major capsid protein GpE VSVS12_00922 54c7071c354f0bfbbc2cabcff8e553e5 504 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 61 452 3.4E-95 T 11-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 VSVS12_00922 54c7071c354f0bfbbc2cabcff8e553e5 504 SUPERFAMILY SSF56317 214 485 2.49E-41 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VSVS12_00922 54c7071c354f0bfbbc2cabcff8e553e5 504 Gene3D G3DSA:3.60.110.10 211 473 1.8E-15 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VSVS12_00922 54c7071c354f0bfbbc2cabcff8e553e5 504 Pfam PF00795 Carbon-nitrogen hydrolase 223 477 5.6E-40 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 VSVS12_00922 54c7071c354f0bfbbc2cabcff8e553e5 504 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 8 490 23.501 T 11-10-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 VSVS12_00464 b413ceef63987af3add9b543a174cb56 313 Gene3D G3DSA:3.60.20.30 178 313 2.7E-47 T 11-10-2018 VSVS12_00464 b413ceef63987af3add9b543a174cb56 313 Pfam PF01112 Asparaginase 6 304 9.4E-103 T 11-10-2018 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 VSVS12_00464 b413ceef63987af3add9b543a174cb56 313 SUPERFAMILY SSF56235 5 305 9.37E-92 T 11-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal VSVS12_01727 272640c6d4b6fb481bcc750e0e14d951 88 Pfam PF11173 Protein of unknown function (DUF2960) 1 75 3.5E-35 T 11-10-2018 IPR021343 Protein of unknown function DUF2960 VSVS12_02608 39023ef6edcb8dc974041796817a971f 337 ProSitePatterns PS01276 Peptidase family U32 signature. 163 181 - T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 VSVS12_02608 39023ef6edcb8dc974041796817a971f 337 Pfam PF01136 Peptidase family U32 75 336 3.5E-69 T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 VSVS12_03045 cb73bd4947b30fb2afca8541a9d72a23 407 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 3 404 36.658 T 11-10-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 VSVS12_03045 cb73bd4947b30fb2afca8541a9d72a23 407 PRINTS PR00173 Glutamate-aspartate symporter signature 185 204 1.4E-17 T 11-10-2018 VSVS12_03045 cb73bd4947b30fb2afca8541a9d72a23 407 PRINTS PR00173 Glutamate-aspartate symporter signature 322 341 1.4E-17 T 11-10-2018 VSVS12_03045 cb73bd4947b30fb2afca8541a9d72a23 407 PRINTS PR00173 Glutamate-aspartate symporter signature 349 369 1.4E-17 T 11-10-2018 VSVS12_03045 cb73bd4947b30fb2afca8541a9d72a23 407 PRINTS PR00173 Glutamate-aspartate symporter signature 13 33 1.4E-17 T 11-10-2018 VSVS12_03045 cb73bd4947b30fb2afca8541a9d72a23 407 PRINTS PR00173 Glutamate-aspartate symporter signature 220 239 1.4E-17 T 11-10-2018 VSVS12_03045 cb73bd4947b30fb2afca8541a9d72a23 407 PRINTS PR00173 Glutamate-aspartate symporter signature 287 313 1.4E-17 T 11-10-2018 VSVS12_03045 cb73bd4947b30fb2afca8541a9d72a23 407 Pfam PF00375 Sodium:dicarboxylate symporter family 15 398 7.6E-69 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 VSVS12_03045 cb73bd4947b30fb2afca8541a9d72a23 407 SUPERFAMILY SSF118215 15 398 1.31E-99 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VSVS12_03045 cb73bd4947b30fb2afca8541a9d72a23 407 Gene3D G3DSA:1.10.3860.10 5 405 4.4E-75 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VSVS12_02016 76ab33b01e59e328080b9e2cb1920295 255 Gene3D G3DSA:3.30.460.10 7 102 4.0E-9 T 11-10-2018 VSVS12_02016 76ab33b01e59e328080b9e2cb1920295 255 SUPERFAMILY SSF81301 12 79 4.91E-8 T 11-10-2018 VSVS12_02016 76ab33b01e59e328080b9e2cb1920295 255 Pfam PF01909 Nucleotidyltransferase domain 36 86 1.7E-4 T 11-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 VSVS12_00295 6f0a8a040d2e13de9ec9a1d2e30a1c23 223 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 19 39 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_00295 6f0a8a040d2e13de9ec9a1d2e30a1c23 223 Pfam PF11612 Type II secretion system (T2SS), protein J 71 208 5.7E-39 T 11-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 VSVS12_00295 6f0a8a040d2e13de9ec9a1d2e30a1c23 223 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 18 40 1.2E-7 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_00295 6f0a8a040d2e13de9ec9a1d2e30a1c23 223 Gene3D G3DSA:3.10.610.10 50 163 4.2E-35 T 11-10-2018 VSVS12_00295 6f0a8a040d2e13de9ec9a1d2e30a1c23 223 Pfam PF07963 Prokaryotic N-terminal methylation motif 17 40 7.3E-9 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_00295 6f0a8a040d2e13de9ec9a1d2e30a1c23 223 TIGRFAM TIGR01711 gspJ: type II secretion system protein J 19 211 1.3E-72 T 11-10-2018 IPR010055 Type II secretion system protein J GO:0008565|GO:0015627|GO:0015628 VSVS12_00295 6f0a8a040d2e13de9ec9a1d2e30a1c23 223 SUPERFAMILY SSF54523 54 213 1.26E-54 T 11-10-2018 VSVS12_00295 6f0a8a040d2e13de9ec9a1d2e30a1c23 223 Gene3D G3DSA:2.10.70.20 165 214 1.4E-18 T 11-10-2018 VSVS12_01253 ef62e80b1fb1d97b709a5274d1e738a3 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 430 450 5.9E-37 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VSVS12_01253 ef62e80b1fb1d97b709a5274d1e738a3 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 11 32 5.9E-37 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VSVS12_01253 ef62e80b1fb1d97b709a5274d1e738a3 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 312 331 5.9E-37 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VSVS12_01253 ef62e80b1fb1d97b709a5274d1e738a3 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 40 59 5.9E-37 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VSVS12_01253 ef62e80b1fb1d97b709a5274d1e738a3 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 84 110 5.9E-37 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VSVS12_01253 ef62e80b1fb1d97b709a5274d1e738a3 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 389 409 5.9E-37 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VSVS12_01253 ef62e80b1fb1d97b709a5274d1e738a3 488 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 258 278 5.9E-37 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VSVS12_01253 ef62e80b1fb1d97b709a5274d1e738a3 488 Pfam PF00209 Sodium:neurotransmitter symporter family 3 121 3.1E-39 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VSVS12_01253 ef62e80b1fb1d97b709a5274d1e738a3 488 Pfam PF00209 Sodium:neurotransmitter symporter family 123 476 1.1E-76 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VSVS12_01253 ef62e80b1fb1d97b709a5274d1e738a3 488 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 27 41 - T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VSVS12_01253 ef62e80b1fb1d97b709a5274d1e738a3 488 SUPERFAMILY SSF161070 3 471 1.14E-145 T 11-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 VSVS12_01481 502c4fcca189763253dbae110f63d110 139 Pfam PF00011 Hsp20/alpha crystallin family 43 138 3.3E-18 T 11-10-2018 IPR002068 Alpha crystallin/Hsp20 domain VSVS12_01481 502c4fcca189763253dbae110f63d110 139 SUPERFAMILY SSF49764 31 138 8.37E-21 T 11-10-2018 IPR008978 HSP20-like chaperone VSVS12_01481 502c4fcca189763253dbae110f63d110 139 Gene3D G3DSA:2.60.40.790 34 138 3.9E-22 T 11-10-2018 IPR008978 HSP20-like chaperone VSVS12_03758 19bf3b7feec7ecb2d81ca1f7dce8e596 85 SUPERFAMILY SSF48208 4 84 1.97E-22 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 VSVS12_03758 19bf3b7feec7ecb2d81ca1f7dce8e596 85 Pfam PF01270 Glycosyl hydrolases family 8 5 82 4.4E-21 T 11-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 VSVS12_03758 19bf3b7feec7ecb2d81ca1f7dce8e596 85 Gene3D G3DSA:1.50.10.10 20 85 2.7E-25 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 VSVS12_02712 dde401cee110c7f5692f3d72fe88c1b1 309 ProSitePatterns PS00894 DeoR-type HTH domain signature. 35 69 - T 11-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 VSVS12_02712 dde401cee110c7f5692f3d72fe88c1b1 309 Pfam PF08220 DeoR-like helix-turn-helix domain 35 85 2.9E-6 T 11-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 VSVS12_02712 dde401cee110c7f5692f3d72fe88c1b1 309 Pfam PF13280 WYL domain 140 304 2.3E-22 T 11-10-2018 IPR026881 WYL domain VSVS12_04512 342cebe4bf9f271d5fb2082995cf6591 545 Pfam PF14284 PcfJ-like protein 412 525 1.3E-9 T 11-10-2018 IPR025586 PcfJ-like protein VSVS12_04386 342cebe4bf9f271d5fb2082995cf6591 545 Pfam PF14284 PcfJ-like protein 412 525 1.3E-9 T 11-10-2018 IPR025586 PcfJ-like protein VSVS12_02353 c31553978cf7381efbba7a61b6ba1864 221 Pfam PF12561 ToxR activated gene A lipoprotein 64 189 3.3E-11 T 11-10-2018 IPR022218 ToxR activated gene A lipoprotein VSVS12_01661 2e5b7310d98c4331bf25b9e7bb5dfa59 430 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 8 401 8.0E-104 T 11-10-2018 IPR005219 Intermembrane transport protein PqiA-like, Enterobacteria-type VSVS12_01661 2e5b7310d98c4331bf25b9e7bb5dfa59 430 Pfam PF04403 Paraquat-inducible protein A 53 204 1.7E-37 T 11-10-2018 IPR007498 Intermembrane transport protein PqiA-like VSVS12_01661 2e5b7310d98c4331bf25b9e7bb5dfa59 430 Pfam PF04403 Paraquat-inducible protein A 247 403 9.3E-48 T 11-10-2018 IPR007498 Intermembrane transport protein PqiA-like VSVS12_01661 2e5b7310d98c4331bf25b9e7bb5dfa59 430 SUPERFAMILY SSF48695 10 242 1.0E-7 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily VSVS12_03112 5931ece9ef311d052e6a43a88db7c004 170 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 32 169 5.7E-32 T 11-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 VSVS12_03112 5931ece9ef311d052e6a43a88db7c004 170 SUPERFAMILY SSF49329 25 170 3.66E-49 T 11-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 VSVS12_03112 5931ece9ef311d052e6a43a88db7c004 170 Gene3D G3DSA:2.60.40.200 20 170 1.3E-47 T 11-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 VSVS12_03112 5931ece9ef311d052e6a43a88db7c004 170 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 158 169 - T 11-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 VSVS12_01825 6470c1b545a88d659714f58883a58420 415 PIRSF PIRSF006728 1 392 1.0E-99 T 11-10-2018 IPR008135 Competence-induced protein CinA VSVS12_01825 6470c1b545a88d659714f58883a58420 415 SUPERFAMILY SSF53218 2 204 3.14E-31 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily VSVS12_01825 6470c1b545a88d659714f58883a58420 415 SUPERFAMILY SSF142433 253 386 6.8E-6 T 11-10-2018 IPR036653 CinA-like, C-terminal VSVS12_01825 6470c1b545a88d659714f58883a58420 415 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 412 100.972 T 11-10-2018 IPR008135 Competence-induced protein CinA VSVS12_01825 6470c1b545a88d659714f58883a58420 415 SMART SM00852 5 172 1.0E-28 T 11-10-2018 IPR001453 MoaB/Mog domain VSVS12_01825 6470c1b545a88d659714f58883a58420 415 Gene3D G3DSA:3.40.980.10 1 173 3.1E-45 T 11-10-2018 IPR036425 MoaB/Mog-like domain superfamily VSVS12_01825 6470c1b545a88d659714f58883a58420 415 Pfam PF00994 Probable molybdopterin binding domain 5 169 1.1E-27 T 11-10-2018 IPR001453 MoaB/Mog domain VSVS12_01825 6470c1b545a88d659714f58883a58420 415 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 357 7.8E-80 T 11-10-2018 IPR008135 Competence-induced protein CinA VSVS12_03169 1262cac84a2fc033145976faba835fa0 194 Pfam PF03412 Peptidase C39 family 14 149 5.2E-22 T 11-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 VSVS12_03169 1262cac84a2fc033145976faba835fa0 194 Gene3D G3DSA:3.90.70.10 6 159 2.6E-33 T 11-10-2018 VSVS12_02592 2c0960425b2eed697177ce66ffaeb046 158 Pfam PF06853 Protein of unknown function (DUF1249) 39 151 6.8E-39 T 11-10-2018 IPR009659 Protein of unknown function DUF1249 VSVS12_04457 e69ffcd40a4915174b3b0d92295052d8 200 Gene3D G3DSA:3.40.1280.10 1 200 3.8E-57 T 11-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal VSVS12_04457 e69ffcd40a4915174b3b0d92295052d8 200 Pfam PF04013 Putative SAM-dependent RNA methyltransferase 4 198 3.7E-56 T 11-10-2018 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY GO:0008175 VSVS12_04457 e69ffcd40a4915174b3b0d92295052d8 200 SUPERFAMILY SSF75217 3 199 2.49E-63 T 11-10-2018 IPR029028 Alpha/beta knot methyltransferases VSVS12_04457 e69ffcd40a4915174b3b0d92295052d8 200 Hamap MF_00587 tRNA (pseudouridine(54)-N(1))-methyltransferase [trmY]. 2 199 24.112 T 11-10-2018 IPR007158 tRNA (pseudouridine(54)-N(1))-methyltransferase, TrmY GO:0008175 VSVS12_01697 9b697e9802f9ffdf27646f765379b733 286 Gene3D G3DSA:1.10.3720.10 7 278 2.2E-54 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_01697 9b697e9802f9ffdf27646f765379b733 286 SUPERFAMILY SSF161098 10 275 6.93E-55 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_01697 9b697e9802f9ffdf27646f765379b733 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 283 8.6E-19 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VSVS12_03604 36e42d9ecc28aae5c3f8e6f97acf6c3e 176 ProSitePatterns PS00893 Nudix box signature. 73 94 - T 11-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 VSVS12_03604 36e42d9ecc28aae5c3f8e6f97acf6c3e 176 SUPERFAMILY SSF55811 6 173 9.75E-46 T 11-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 VSVS12_03604 36e42d9ecc28aae5c3f8e6f97acf6c3e 176 Pfam PF00293 NUDIX domain 39 153 1.1E-16 T 11-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 VSVS12_03604 36e42d9ecc28aae5c3f8e6f97acf6c3e 176 Gene3D G3DSA:3.90.79.10 3 172 2.4E-49 T 11-10-2018 VSVS12_04440 c78d60ea97b2503819522845a5575f0c 282 TIGRFAM TIGR03749 conj_TIGR03749: integrating conjugative element protein, PFL_4704 family 13 270 1.3E-46 T 11-10-2018 IPR021844 Integrating conjugative element protein, PFL4704 VSVS12_04440 c78d60ea97b2503819522845a5575f0c 282 Pfam PF11920 Protein of unknown function (DUF3438) 10 276 4.4E-45 T 11-10-2018 IPR021844 Integrating conjugative element protein, PFL4704 VSVS12_03010 5fdb0c8edd525be6708697daa6279696 149 Gene3D G3DSA:3.30.70.330 44 147 1.6E-26 T 11-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily VSVS12_03010 5fdb0c8edd525be6708697daa6279696 149 SUPERFAMILY SSF54928 52 140 1.09E-26 T 11-10-2018 IPR035979 RNA-binding domain superfamily GO:0003676 VSVS12_03010 5fdb0c8edd525be6708697daa6279696 149 Pfam PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 63 132 9.0E-18 T 11-10-2018 IPR000504 RNA recognition motif domain GO:0003676 VSVS12_03010 5fdb0c8edd525be6708697daa6279696 149 SMART SM00360 62 134 6.7E-21 T 11-10-2018 IPR000504 RNA recognition motif domain GO:0003676 VSVS12_01973 dda177ed0b7b3a5983461648c36de8a3 426 SUPERFAMILY SSF52540 75 356 8.61E-75 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01973 dda177ed0b7b3a5983461648c36de8a3 426 Gene3D G3DSA:3.40.50.300 219 424 7.2E-50 T 11-10-2018 VSVS12_01973 dda177ed0b7b3a5983461648c36de8a3 426 SMART SM00490 258 339 2.8E-31 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_01973 dda177ed0b7b3a5983461648c36de8a3 426 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 153 161 - T 11-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site VSVS12_01973 dda177ed0b7b3a5983461648c36de8a3 426 Gene3D G3DSA:3.40.50.300 1 218 1.5E-77 T 11-10-2018 VSVS12_01973 dda177ed0b7b3a5983461648c36de8a3 426 SMART SM00487 20 229 1.7E-58 T 11-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain VSVS12_01973 dda177ed0b7b3a5983461648c36de8a3 426 Pfam PF00271 Helicase conserved C-terminal domain 232 339 1.9E-29 T 11-10-2018 IPR001650 Helicase, C-terminal VSVS12_01973 dda177ed0b7b3a5983461648c36de8a3 426 SUPERFAMILY SSF52540 23 100 6.11E-5 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01973 dda177ed0b7b3a5983461648c36de8a3 426 Pfam PF00270 DEAD/DEAH box helicase 25 195 1.1E-51 T 11-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 VSVS12_03534 02296d224070a9fb11f5992025f8b400 451 SUPERFAMILY SSF51445 7 374 9.5E-57 T 11-10-2018 IPR017853 Glycoside hydrolase superfamily VSVS12_03534 02296d224070a9fb11f5992025f8b400 451 PRINTS PR00110 Alpha-amylase signature 294 306 6.7E-16 T 11-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 VSVS12_03534 02296d224070a9fb11f5992025f8b400 451 PRINTS PR00110 Alpha-amylase signature 53 70 6.7E-16 T 11-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 VSVS12_03534 02296d224070a9fb11f5992025f8b400 451 PRINTS PR00110 Alpha-amylase signature 86 97 6.7E-16 T 11-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 VSVS12_03534 02296d224070a9fb11f5992025f8b400 451 PRINTS PR00110 Alpha-amylase signature 199 210 6.7E-16 T 11-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 VSVS12_03534 02296d224070a9fb11f5992025f8b400 451 PRINTS PR00110 Alpha-amylase signature 228 246 6.7E-16 T 11-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 VSVS12_03534 02296d224070a9fb11f5992025f8b400 451 SMART SM00642 8 372 6.9E-27 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VSVS12_03534 02296d224070a9fb11f5992025f8b400 451 Gene3D G3DSA:3.20.20.80 5 377 1.9E-77 T 11-10-2018 VSVS12_03534 02296d224070a9fb11f5992025f8b400 451 Pfam PF00128 Alpha amylase, catalytic domain 28 231 1.3E-16 T 11-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 VSVS12_03376 7cdc56047b2d87ea30cbfe99ec166936 161 Pfam PF13689 Domain of unknown function (DUF4154) 19 155 2.3E-22 T 11-10-2018 IPR025293 YfiR-like VSVS12_03483 de68203f62c1e3a53e3f39496e4f2dc9 320 SUPERFAMILY SSF143422 16 192 4.97E-19 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 VSVS12_03483 de68203f62c1e3a53e3f39496e4f2dc9 320 SMART SM01321 13 187 0.0068 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 VSVS12_00279 c12cc279b0ff358409443bd4a68d101a 179 Gene3D G3DSA:3.40.50.300 3 168 2.1E-7 T 11-10-2018 VSVS12_00279 c12cc279b0ff358409443bd4a68d101a 179 Pfam PF13521 AAA domain 4 164 1.5E-35 T 11-10-2018 IPR038727 NadR/Ttd14, AAA domain VSVS12_00279 c12cc279b0ff358409443bd4a68d101a 179 SUPERFAMILY SSF52540 4 168 2.53E-15 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_04345 cf15add186c2c110bcffba5f000666ad 207 Gene3D G3DSA:2.160.10.10 1 207 4.1E-78 T 11-10-2018 VSVS12_04345 cf15add186c2c110bcffba5f000666ad 207 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 144 4.8E-11 T 11-10-2018 IPR001451 Hexapeptide repeat VSVS12_04345 cf15add186c2c110bcffba5f000666ad 207 SUPERFAMILY SSF51161 18 205 1.29E-48 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily VSVS12_04345 cf15add186c2c110bcffba5f000666ad 207 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 118 146 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VSVS12_00438 fdea8ceb8a29006ab5c5a4017230eaf2 200 Gene3D G3DSA:3.30.70.60 98 198 1.5E-18 T 11-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 VSVS12_00438 fdea8ceb8a29006ab5c5a4017230eaf2 200 PIRSF PIRSF016482 1 200 3.7E-42 T 11-10-2018 IPR007445 Pilus assembly protein, PilO VSVS12_00438 fdea8ceb8a29006ab5c5a4017230eaf2 200 Pfam PF04350 Pilus assembly protein, PilO 51 191 2.5E-27 T 11-10-2018 IPR007445 Pilus assembly protein, PilO VSVS12_00627 cd8a6330c4749a7e5e3ad8ccab3d81ba 859 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 32 724 9.0E-216 T 11-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ VSVS12_00627 cd8a6330c4749a7e5e3ad8ccab3d81ba 859 Pfam PF11874 Domain of unknown function (DUF3394) 674 853 8.8E-67 T 11-10-2018 IPR021814 Protein of unknown function DUF3394 VSVS12_00627 cd8a6330c4749a7e5e3ad8ccab3d81ba 859 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 134 667 3.8E-79 T 11-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VSVS12_04340 db345560883aeb74d93382b6227fa2a5 215 SUPERFAMILY SSF56784 1 212 4.96E-51 T 11-10-2018 IPR036412 HAD-like superfamily VSVS12_04340 db345560883aeb74d93382b6227fa2a5 215 Gene3D G3DSA:1.10.150.240 16 84 2.2E-51 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VSVS12_04340 db345560883aeb74d93382b6227fa2a5 215 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 182 3.1E-32 T 11-10-2018 VSVS12_04340 db345560883aeb74d93382b6227fa2a5 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 6.3E-11 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VSVS12_04340 db345560883aeb74d93382b6227fa2a5 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 6.3E-11 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VSVS12_04340 db345560883aeb74d93382b6227fa2a5 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 6.3E-11 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VSVS12_04340 db345560883aeb74d93382b6227fa2a5 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 6.3E-11 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VSVS12_04340 db345560883aeb74d93382b6227fa2a5 215 Gene3D G3DSA:3.40.50.1000 4 194 2.2E-51 T 11-10-2018 IPR023214 HAD superfamily VSVS12_04340 db345560883aeb74d93382b6227fa2a5 215 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 75 182 7.4E-17 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VSVS12_02819 bac17542e2635ae22f70ef7b465576d7 312 Pfam PF14237 Domain of unknown function (DUF4339) 7 48 9.5E-12 T 11-10-2018 IPR025640 Domain of unknown function DUF4339 Reactome: R-HSA-6798695 VSVS12_00403 7a1d83d8537868f3b41465e77c428794 174 Pfam PF13505 Outer membrane protein beta-barrel domain 13 174 6.8E-17 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel VSVS12_00403 7a1d83d8537868f3b41465e77c428794 174 SUPERFAMILY SSF56925 24 174 5.23E-19 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VSVS12_00403 7a1d83d8537868f3b41465e77c428794 174 Gene3D G3DSA:2.40.160.20 21 174 3.1E-15 T 11-10-2018 VSVS12_04552 f225e5988c52a946ad0b0ac3b343cdaa 355 SUPERFAMILY SSF56281 35 293 2.32E-29 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VSVS12_04552 f225e5988c52a946ad0b0ac3b343cdaa 355 Gene3D G3DSA:3.60.15.10 3 355 9.8E-109 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VSVS12_04552 f225e5988c52a946ad0b0ac3b343cdaa 355 Pfam PF13483 Beta-lactamase superfamily domain 42 282 1.8E-14 T 11-10-2018 VSVS12_04579 f225e5988c52a946ad0b0ac3b343cdaa 355 SUPERFAMILY SSF56281 35 293 2.32E-29 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VSVS12_04579 f225e5988c52a946ad0b0ac3b343cdaa 355 Gene3D G3DSA:3.60.15.10 3 355 9.8E-109 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VSVS12_04579 f225e5988c52a946ad0b0ac3b343cdaa 355 Pfam PF13483 Beta-lactamase superfamily domain 42 282 1.8E-14 T 11-10-2018 VSVS12_00677 2d4a333cfeed2f99734be73ffcd04431 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 9.2E-9 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VSVS12_00677 2d4a333cfeed2f99734be73ffcd04431 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 102 127 9.2E-9 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VSVS12_00677 2d4a333cfeed2f99734be73ffcd04431 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 9.2E-9 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VSVS12_00677 2d4a333cfeed2f99734be73ffcd04431 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 9.2E-9 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VSVS12_00677 2d4a333cfeed2f99734be73ffcd04431 256 Pfam PF01061 ABC-2 type transporter 8 218 6.6E-41 T 11-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 VSVS12_00677 2d4a333cfeed2f99734be73ffcd04431 256 PIRSF PIRSF006648 7 253 9.5E-28 T 11-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 VSVS12_00183 92d0cf97dc36cd9858fa7850a9be1b35 401 Gene3D G3DSA:1.20.1720.10 8 378 1.8E-75 T 11-10-2018 VSVS12_00183 92d0cf97dc36cd9858fa7850a9be1b35 401 Pfam PF07690 Major Facilitator Superfamily 13 340 3.6E-37 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VSVS12_00183 92d0cf97dc36cd9858fa7850a9be1b35 401 SUPERFAMILY SSF103473 6 375 1.57E-52 T 11-10-2018 IPR036259 MFS transporter superfamily VSVS12_00183 92d0cf97dc36cd9858fa7850a9be1b35 401 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 5 370 2.4E-86 T 11-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 VSVS12_00542 c12220a34f32cbc206eba1c3dee7a9e5 187 Gene3D G3DSA:2.60.450.10 59 186 1.2E-35 T 11-10-2018 VSVS12_00542 c12220a34f32cbc206eba1c3dee7a9e5 187 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 3 185 22.869 T 11-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 VSVS12_00542 c12220a34f32cbc206eba1c3dee7a9e5 187 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 10 183 7.3E-40 T 11-10-2018 IPR010664 Lipopolysaccharide assembly, LptC-related VSVS12_00542 c12220a34f32cbc206eba1c3dee7a9e5 187 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 6 182 6.2E-44 T 11-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 VSVS12_00542 c12220a34f32cbc206eba1c3dee7a9e5 187 PIRSF PIRSF028513 3 185 2.6E-30 T 11-10-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 VSVS12_00203 d979041072884e9e71b07b5e6728e1a6 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 43 3.8E-26 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00203 d979041072884e9e71b07b5e6728e1a6 44 Pfam PF00468 Ribosomal protein L34 1 43 4.9E-24 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00203 d979041072884e9e71b07b5e6728e1a6 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.4 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00203 d979041072884e9e71b07b5e6728e1a6 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 11-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00203 d979041072884e9e71b07b5e6728e1a6 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 39 1.0E-14 T 11-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_02797 c96bd7bbf7091dda08169d33b90c4552 97 SUPERFAMILY SSF46689 1 90 1.77E-20 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_02797 c96bd7bbf7091dda08169d33b90c4552 97 Pfam PF01527 Transposase 4 68 5.2E-15 T 11-10-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 VSVS12_02797 c96bd7bbf7091dda08169d33b90c4552 97 Gene3D G3DSA:1.10.10.60 7 87 1.7E-12 T 11-10-2018 VSVS12_02236 3de467a3743cec6883d63593251f8a16 253 PRINTS PR01805 VacJ lipoprotein signature 55 71 1.3E-29 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 VSVS12_02236 3de467a3743cec6883d63593251f8a16 253 PRINTS PR01805 VacJ lipoprotein signature 37 50 1.3E-29 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 VSVS12_02236 3de467a3743cec6883d63593251f8a16 253 PRINTS PR01805 VacJ lipoprotein signature 106 123 1.3E-29 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 VSVS12_02236 3de467a3743cec6883d63593251f8a16 253 PRINTS PR01805 VacJ lipoprotein signature 143 160 1.3E-29 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 VSVS12_02236 3de467a3743cec6883d63593251f8a16 253 Pfam PF04333 MlaA lipoprotein 36 227 4.6E-63 T 11-10-2018 IPR007428 MlaA lipoprotein GO:0016020 VSVS12_02791 df6f2cc2e4b7532f9239c6cc2a6d52ab 147 Gene3D G3DSA:1.10.10.410 91 147 9.5E-20 T 11-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal VSVS12_02791 df6f2cc2e4b7532f9239c6cc2a6d52ab 147 SUPERFAMILY SSF89095 1 146 1.62E-43 T 11-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 VSVS12_02791 df6f2cc2e4b7532f9239c6cc2a6d52ab 147 Pfam PF09424 Yqey-like protein 5 146 6.3E-57 T 11-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 VSVS12_02791 df6f2cc2e4b7532f9239c6cc2a6d52ab 147 Gene3D G3DSA:1.10.1510.10 1 90 3.7E-27 T 11-10-2018 VSVS12_01976 c13810a406f7496145fbca83e15ae725 127 Pfam PF10807 Protein of unknown function (DUF2541) 4 116 1.4E-10 T 11-10-2018 IPR020240 Uncharacterised protein family UPF0412, YaaI VSVS12_01976 c13810a406f7496145fbca83e15ae725 127 ProDom PD082838 YAAI PERIPLASMIC STY0011 ECS0013 PRECURSOR SIGNAL 16 116 0.001 T 11-10-2018 IPR020240 Uncharacterised protein family UPF0412, YaaI VSVS12_03464 b0f4b405c0a0626a6e2b78854acebed2 85 Gene3D G3DSA:1.20.58.660 11 85 2.6E-13 T 11-10-2018 VSVS12_03464 b0f4b405c0a0626a6e2b78854acebed2 85 Pfam PF04325 Protein of unknown function (DUF465) 29 74 3.4E-10 T 11-10-2018 IPR007420 Protein of unknown function DUF465 VSVS12_00248 2092eed295cd92ba9a9cd9ddad8a18d1 217 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 13 214 2.1E-65 T 11-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 VSVS12_00248 2092eed295cd92ba9a9cd9ddad8a18d1 217 Pfam PF03006 Haemolysin-III related 10 207 1.0E-35 T 11-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 VSVS12_02065 7e2f0b8245ed3b5be65963505935f659 531 Pfam PF03553 Na+/H+ antiporter family 165 498 1.3E-100 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VSVS12_01977 b4ab4fb6126bbcd40289ddc246301c96 114 Gene3D G3DSA:3.40.250.10 24 114 6.4E-26 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily VSVS12_01977 b4ab4fb6126bbcd40289ddc246301c96 114 Pfam PF00581 Rhodanese-like domain 28 111 3.1E-13 T 11-10-2018 IPR001763 Rhodanese-like domain VSVS12_01977 b4ab4fb6126bbcd40289ddc246301c96 114 SUPERFAMILY SSF52821 16 108 1.83E-26 T 11-10-2018 IPR036873 Rhodanese-like domain superfamily VSVS12_01977 b4ab4fb6126bbcd40289ddc246301c96 114 SMART SM00450 22 113 6.5E-17 T 11-10-2018 IPR001763 Rhodanese-like domain VSVS12_02051 6f87a660233f078216b21f0f06412664 320 SUPERFAMILY SSF161098 71 298 1.8E-18 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_02051 6f87a660233f078216b21f0f06412664 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 314 2.7E-39 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VSVS12_01325 f578ccd1e800237b130c38dbcf018b0a 197 Gene3D G3DSA:1.10.357.10 59 197 1.7E-22 T 11-10-2018 VSVS12_01325 f578ccd1e800237b130c38dbcf018b0a 197 SUPERFAMILY SSF48498 77 189 6.67E-6 T 11-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily VSVS12_01325 f578ccd1e800237b130c38dbcf018b0a 197 SUPERFAMILY SSF46689 3 83 1.35E-17 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_01325 f578ccd1e800237b130c38dbcf018b0a 197 Gene3D G3DSA:1.10.10.60 1 56 8.1E-20 T 11-10-2018 VSVS12_01325 f578ccd1e800237b130c38dbcf018b0a 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 7.1E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VSVS12_01325 f578ccd1e800237b130c38dbcf018b0a 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 7.1E-9 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VSVS12_01325 f578ccd1e800237b130c38dbcf018b0a 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 57 6.0E-16 T 11-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 VSVS12_01729 89170dff981159611bb45c0f6620e2f1 218 SMART SM01144 1 195 5.2E-56 T 11-10-2018 IPR005636 DTW VSVS12_01729 89170dff981159611bb45c0f6620e2f1 218 Pfam PF03942 DTW domain 3 189 5.1E-40 T 11-10-2018 IPR005636 DTW VSVS12_02782 2a52cbb00a8f156d2095d094c23c6bb4 240 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 14 237 7.0E-76 T 11-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 VSVS12_02782 2a52cbb00a8f156d2095d094c23c6bb4 240 Gene3D G3DSA:3.90.550.10 9 239 6.3E-70 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VSVS12_02782 2a52cbb00a8f156d2095d094c23c6bb4 240 SUPERFAMILY SSF53448 14 236 2.5E-58 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VSVS12_02782 2a52cbb00a8f156d2095d094c23c6bb4 240 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 13 235 40.176 T 11-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 VSVS12_02782 2a52cbb00a8f156d2095d094c23c6bb4 240 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 16 235 2.1E-73 T 11-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 VSVS12_00866 0a3bf11a85c9ed9dffa4948efee1403e 281 Gene3D G3DSA:3.30.479.20 57 140 4.8E-26 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 VSVS12_00866 0a3bf11a85c9ed9dffa4948efee1403e 281 Gene3D G3DSA:1.10.286.20 185 224 9.5E-22 T 11-10-2018 VSVS12_00866 0a3bf11a85c9ed9dffa4948efee1403e 281 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 11-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VSVS12_00866 0a3bf11a85c9ed9dffa4948efee1403e 281 SUPERFAMILY SSF46934 4 54 1.63E-17 T 11-10-2018 IPR009060 UBA-like superfamily GO:0005515 VSVS12_00866 0a3bf11a85c9ed9dffa4948efee1403e 281 Gene3D G3DSA:1.10.8.10 1 56 2.0E-25 T 11-10-2018 VSVS12_00866 0a3bf11a85c9ed9dffa4948efee1403e 281 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 280 2.3E-103 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VSVS12_00866 0a3bf11a85c9ed9dffa4948efee1403e 281 SUPERFAMILY SSF54713 56 138 4.58E-18 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 VSVS12_00866 0a3bf11a85c9ed9dffa4948efee1403e 281 SUPERFAMILY SSF54713 142 280 7.19E-46 T 11-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 VSVS12_00866 0a3bf11a85c9ed9dffa4948efee1403e 281 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 11-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VSVS12_00866 0a3bf11a85c9ed9dffa4948efee1403e 281 Hamap MF_00050 Elongation factor Ts [tsf]. 1 280 76.577 T 11-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 VSVS12_00866 0a3bf11a85c9ed9dffa4948efee1403e 281 Pfam PF00889 Elongation factor TS 71 261 3.9E-62 T 11-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 VSVS12_01135 83fc96d587965a25f12ca7c443e11db0 231 PIRSF PIRSF028137 1 231 1.7E-105 T 11-10-2018 IPR016870 Uncharacterised conserved protein UCP028137, membrane VSVS12_01296 5cdd856b345abc983ff273a6c6c0c6ce 292 Gene3D G3DSA:3.10.450.240 167 292 1.9E-6 T 11-10-2018 VSVS12_01296 5cdd856b345abc983ff273a6c6c0c6ce 292 SUPERFAMILY SSF54427 171 291 7.01E-17 T 11-10-2018 IPR032710 NTF2-like domain superfamily VSVS12_01296 5cdd856b345abc983ff273a6c6c0c6ce 292 SMART SM00978 161 292 3.9E-37 T 11-10-2018 IPR007379 Tim44-like domain VSVS12_01296 5cdd856b345abc983ff273a6c6c0c6ce 292 Pfam PF04280 Tim44-like domain 171 291 6.7E-15 T 11-10-2018 IPR007379 Tim44-like domain VSVS12_02059 f772f020f107b6684aa58e09be4f84d9 245 Pfam PF00977 Histidine biosynthesis protein 2 234 1.5E-75 T 11-10-2018 IPR006062 Histidine biosynthesis GO:0000105 VSVS12_02059 f772f020f107b6684aa58e09be4f84d9 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 34.559 T 11-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 VSVS12_02059 f772f020f107b6684aa58e09be4f84d9 245 SUPERFAMILY SSF51366 2 242 2.35E-63 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VSVS12_02059 f772f020f107b6684aa58e09be4f84d9 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 1.8E-77 T 11-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 VSVS12_02059 f772f020f107b6684aa58e09be4f84d9 245 Gene3D G3DSA:3.20.20.70 1 245 1.7E-89 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_03737 bbea0a2b4226f0439d976367c86a3e3e 414 Pfam PF14072 DNA-sulfur modification-associated 60 408 2.1E-7 T 11-10-2018 IPR017642 DNA sulphur modification protein DndB VSVS12_03121 3271e69216622ecb0c350f2a111c6e6f 399 SUPERFAMILY SSF82171 93 318 2.75E-8 T 11-10-2018 VSVS12_01077 e356c03298057a38d8b85ce760943277 201 SUPERFAMILY SSF52540 12 201 6.7E-70 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01077 e356c03298057a38d8b85ce760943277 201 PIRSF PIRSF015617 6 201 8.3E-65 T 11-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 VSVS12_01077 e356c03298057a38d8b85ce760943277 201 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 5 26 5.7E-5 T 11-10-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17 VSVS12_01077 e356c03298057a38d8b85ce760943277 201 Gene3D G3DSA:3.40.50.300 11 201 3.8E-69 T 11-10-2018 VSVS12_01077 e356c03298057a38d8b85ce760943277 201 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 30 201 5.7E-68 T 11-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 VSVS12_01077 e356c03298057a38d8b85ce760943277 201 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 32 201 1.3E-57 T 11-10-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17 VSVS12_03879 be7a25b09f770c9e7d159876ab2fc98e 377 Pfam PF13729 F plasmid transfer operon, TraF, protein 47 293 9.9E-68 T 11-10-2018 IPR032811 Putative conjugal transfer protein TraF-related VSVS12_01447 939975e6edfbde7781038440a1369cca 577 Pfam PF12799 Leucine Rich repeats (2 copies) 96 133 2.0E-7 T 11-10-2018 IPR025875 Leucine rich repeat 4 VSVS12_01447 939975e6edfbde7781038440a1369cca 577 SUPERFAMILY SSF52058 17 305 4.93E-32 T 11-10-2018 VSVS12_01447 939975e6edfbde7781038440a1369cca 577 Pfam PF12975 Domain of unknown function (DUF3859) 393 464 2.0E-5 T 11-10-2018 IPR024331 Domain of unknown function DUF3859 VSVS12_01447 939975e6edfbde7781038440a1369cca 577 Gene3D G3DSA:3.80.10.10 27 333 2.2E-60 T 11-10-2018 IPR032675 Leucine-rich repeat domain superfamily VSVS12_01447 939975e6edfbde7781038440a1369cca 577 Gene3D G3DSA:2.60.40.2390 355 465 5.1E-8 T 11-10-2018 VSVS12_03308 739e81f7c99472430c9c231b518e89b6 159 SUPERFAMILY SSF55729 11 151 7.03E-29 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_03308 739e81f7c99472430c9c231b518e89b6 159 PIRSF PIRSF037663 13 154 2.6E-11 T 11-10-2018 IPR017255 Acetyltransferase, GNAT, predicted VSVS12_03308 739e81f7c99472430c9c231b518e89b6 159 Gene3D G3DSA:3.40.630.30 6 155 1.8E-30 T 11-10-2018 VSVS12_03308 739e81f7c99472430c9c231b518e89b6 159 Pfam PF00583 Acetyltransferase (GNAT) family 31 132 6.1E-14 T 11-10-2018 IPR000182 GNAT domain VSVS12_03051 e14cd54ac531fd38276e0e7793550238 254 Pfam PF00970 Oxidoreductase FAD-binding domain 20 94 1.6E-6 T 11-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 VSVS12_03051 e14cd54ac531fd38276e0e7793550238 254 Gene3D G3DSA:3.40.50.80 104 254 3.4E-39 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VSVS12_03051 e14cd54ac531fd38276e0e7793550238 254 PRINTS PR00410 Phenol hydroxylase reductase family signature 142 151 8.1E-5 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VSVS12_03051 e14cd54ac531fd38276e0e7793550238 254 PRINTS PR00410 Phenol hydroxylase reductase family signature 117 136 8.1E-5 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VSVS12_03051 e14cd54ac531fd38276e0e7793550238 254 PRINTS PR00410 Phenol hydroxylase reductase family signature 34 46 8.1E-5 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VSVS12_03051 e14cd54ac531fd38276e0e7793550238 254 PRINTS PR00410 Phenol hydroxylase reductase family signature 215 223 8.1E-5 T 11-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 VSVS12_03051 e14cd54ac531fd38276e0e7793550238 254 Gene3D G3DSA:2.40.30.10 2 102 3.5E-23 T 11-10-2018 VSVS12_03051 e14cd54ac531fd38276e0e7793550238 254 SUPERFAMILY SSF63380 7 97 5.02E-18 T 11-10-2018 IPR017938 Riboflavin synthase-like beta-barrel VSVS12_03051 e14cd54ac531fd38276e0e7793550238 254 SUPERFAMILY SSF52343 111 254 2.75E-33 T 11-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain VSVS12_03051 e14cd54ac531fd38276e0e7793550238 254 Pfam PF00175 Oxidoreductase NAD-binding domain 118 227 8.6E-16 T 11-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 VSVS12_03846 cbc400615d1879945aed0c00530af015 518 Gene3D G3DSA:3.30.9.10 92 330 5.7E-124 T 11-10-2018 VSVS12_03846 cbc400615d1879945aed0c00530af015 518 Pfam PF01266 FAD dependent oxidoreductase 15 379 2.9E-48 T 11-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 VSVS12_03846 cbc400615d1879945aed0c00530af015 518 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 405 492 1.9E-9 T 11-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VSVS12_03846 cbc400615d1879945aed0c00530af015 518 Gene3D G3DSA:3.50.50.60 15 386 5.7E-124 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_03846 cbc400615d1879945aed0c00530af015 518 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 27 37 1.2E-25 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VSVS12_03846 cbc400615d1879945aed0c00530af015 518 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 323 329 1.2E-25 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VSVS12_03846 cbc400615d1879945aed0c00530af015 518 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 88 100 1.2E-25 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VSVS12_03846 cbc400615d1879945aed0c00530af015 518 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 367 379 1.2E-25 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VSVS12_03846 cbc400615d1879945aed0c00530af015 518 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 14 26 1.2E-25 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VSVS12_03846 cbc400615d1879945aed0c00530af015 518 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 43 55 1.2E-25 T 11-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VSVS12_03846 cbc400615d1879945aed0c00530af015 518 SUPERFAMILY SSF51905 14 331 1.68E-30 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_03846 cbc400615d1879945aed0c00530af015 518 Gene3D G3DSA:1.10.8.870 411 503 2.9E-10 T 11-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 VSVS12_01956 d8ec6c0b30aac4803e8d5a4adf07a09f 154 Gene3D G3DSA:3.40.630.30 1 149 3.2E-17 T 11-10-2018 VSVS12_01956 d8ec6c0b30aac4803e8d5a4adf07a09f 154 SUPERFAMILY SSF55729 2 124 6.73E-15 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_01956 d8ec6c0b30aac4803e8d5a4adf07a09f 154 Pfam PF13673 Acetyltransferase (GNAT) domain 27 124 5.1E-10 T 11-10-2018 IPR000182 GNAT domain VSVS12_00673 ea4fa8554fed92b6e79fe632b3c5311e 160 Pfam PF00916 Sulfate permease family 12 149 7.1E-36 T 11-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 VSVS12_03130 c725a57f6709dc81bc38f1a38204f210 155 SMART SM01022 30 153 5.8E-34 T 11-10-2018 IPR007374 ASCH domain VSVS12_03130 c725a57f6709dc81bc38f1a38204f210 155 Gene3D G3DSA:3.10.400.10 1 153 9.8E-57 T 11-10-2018 VSVS12_03130 c725a57f6709dc81bc38f1a38204f210 155 Pfam PF04266 ASCH domain 40 153 1.4E-21 T 11-10-2018 IPR007374 ASCH domain VSVS12_03130 c725a57f6709dc81bc38f1a38204f210 155 SUPERFAMILY SSF88697 4 155 5.96E-49 T 11-10-2018 IPR015947 PUA-like superfamily VSVS12_03130 c725a57f6709dc81bc38f1a38204f210 155 PIRSF PIRSF021320 1 155 2.8E-45 T 11-10-2018 IPR009326 Protein of unknown function DUF984 VSVS12_00164 3b61c2509380aa84ea54bc12870b1a91 129 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 7 125 19.031 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 VSVS12_00164 3b61c2509380aa84ea54bc12870b1a91 129 TIGRFAM TIGR00494 crcB: protein CrcB 10 123 9.0E-29 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 VSVS12_00164 3b61c2509380aa84ea54bc12870b1a91 129 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 9 120 3.9E-24 T 11-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 VSVS12_00980 99b2daef93a710e892f2708f87bbead9 363 PRINTS PR01010 Flagellar P-ring protein signature 37 52 4.3E-87 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VSVS12_00980 99b2daef93a710e892f2708f87bbead9 363 PRINTS PR01010 Flagellar P-ring protein signature 102 119 4.3E-87 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VSVS12_00980 99b2daef93a710e892f2708f87bbead9 363 PRINTS PR01010 Flagellar P-ring protein signature 22 37 4.3E-87 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VSVS12_00980 99b2daef93a710e892f2708f87bbead9 363 PRINTS PR01010 Flagellar P-ring protein signature 80 99 4.3E-87 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VSVS12_00980 99b2daef93a710e892f2708f87bbead9 363 PRINTS PR01010 Flagellar P-ring protein signature 119 137 4.3E-87 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VSVS12_00980 99b2daef93a710e892f2708f87bbead9 363 PRINTS PR01010 Flagellar P-ring protein signature 54 69 4.3E-87 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VSVS12_00980 99b2daef93a710e892f2708f87bbead9 363 PRINTS PR01010 Flagellar P-ring protein signature 160 178 4.3E-87 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VSVS12_00980 99b2daef93a710e892f2708f87bbead9 363 PRINTS PR01010 Flagellar P-ring protein signature 186 204 4.3E-87 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VSVS12_00980 99b2daef93a710e892f2708f87bbead9 363 PRINTS PR01010 Flagellar P-ring protein signature 250 262 4.3E-87 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VSVS12_00980 99b2daef93a710e892f2708f87bbead9 363 Hamap MF_00416 Flagellar P-ring protein [flgI]. 2 363 39.532 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VSVS12_00980 99b2daef93a710e892f2708f87bbead9 363 Pfam PF02119 Flagellar P-ring protein 22 362 2.6E-137 T 11-10-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 VSVS12_04133 4e2534368e5695b270f456f1a4b7d082 100 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 95 2.0E-16 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VSVS12_04133 4e2534368e5695b270f456f1a4b7d082 100 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 5 87 1.3E-30 T 11-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 VSVS12_04133 4e2534368e5695b270f456f1a4b7d082 100 Gene3D G3DSA:3.40.50.2300 1 99 2.2E-36 T 11-10-2018 VSVS12_04133 4e2534368e5695b270f456f1a4b7d082 100 SUPERFAMILY SSF52794 3 95 1.05E-32 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VSVS12_00247 3fb21a0f9a9808f2111eb72c9e1e50f9 265 Pfam PF07070 SpoOM protein 4 221 1.2E-76 T 11-10-2018 IPR009776 Sporulation stage 0, protein M VSVS12_04581 a5d300df770621f1e4d7c55e16ab69f9 294 Gene3D G3DSA:3.30.110.130 41 120 1.5E-14 T 11-10-2018 VSVS12_04581 a5d300df770621f1e4d7c55e16ab69f9 294 Pfam PF12563 Hemolytic toxin N terminal 17 176 4.3E-24 T 11-10-2018 IPR022220 Hemolytic toxin, N-terminal VSVS12_04581 a5d300df770621f1e4d7c55e16ab69f9 294 Gene3D G3DSA:2.70.240.10 144 263 8.2E-33 T 11-10-2018 VSVS12_04166 c3d5f5ca31f9e610ae1f7af0d5ab81ce 489 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 35 480 2.1E-204 T 11-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 VSVS12_04166 c3d5f5ca31f9e610ae1f7af0d5ab81ce 489 Gene3D G3DSA:3.40.605.10 25 477 1.4E-174 T 11-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 VSVS12_04166 c3d5f5ca31f9e610ae1f7af0d5ab81ce 489 SUPERFAMILY SSF53720 11 484 2.09E-167 T 11-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 VSVS12_04166 c3d5f5ca31f9e610ae1f7af0d5ab81ce 489 Gene3D G3DSA:3.40.309.10 266 454 1.4E-174 T 11-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 VSVS12_04166 c3d5f5ca31f9e610ae1f7af0d5ab81ce 489 Pfam PF00171 Aldehyde dehydrogenase family 25 480 3.1E-165 T 11-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 VSVS12_04166 c3d5f5ca31f9e610ae1f7af0d5ab81ce 489 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 259 266 - T 11-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 VSVS12_04166 c3d5f5ca31f9e610ae1f7af0d5ab81ce 489 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 287 298 - T 11-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 VSVS12_03116 74cedd7e5e211cf7e20c0e17fef572e9 527 Gene3D G3DSA:3.30.1490.50 396 464 1.3E-94 T 11-10-2018 IPR014709 Glutathione synthase, C-terminal, eukaryotic KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|Reactome: R-HSA-174403|Reactome: R-HSA-5579006 VSVS12_03116 74cedd7e5e211cf7e20c0e17fef572e9 527 Pfam PF03917 Eukaryotic glutathione synthase, ATP binding domain 24 525 1.3E-56 T 11-10-2018 IPR005615 Glutathione synthase GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|Reactome: R-HSA-174403|Reactome: R-HSA-5579006 VSVS12_03116 74cedd7e5e211cf7e20c0e17fef572e9 527 Gene3D G3DSA:3.30.1490.80 25 476 1.3E-94 T 11-10-2018 IPR014049 Glutathione synthase, N-terminal, eukaryotic GO:0004363|GO:0005524 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|Reactome: R-HSA-174403|Reactome: R-HSA-5579006 VSVS12_03116 74cedd7e5e211cf7e20c0e17fef572e9 527 SUPERFAMILY SSF52440 234 356 1.87E-21 T 11-10-2018 IPR016185 Pre-ATP-grasp domain superfamily VSVS12_03116 74cedd7e5e211cf7e20c0e17fef572e9 527 Gene3D G3DSA:3.30.470.20 59 523 1.3E-94 T 11-10-2018 VSVS12_03116 74cedd7e5e211cf7e20c0e17fef572e9 527 Gene3D G3DSA:3.40.50.1760 208 360 1.3E-94 T 11-10-2018 IPR037013 Glutathione synthase, substrate-binding domain superfamily GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|Reactome: R-HSA-174403|Reactome: R-HSA-5579006 VSVS12_03116 74cedd7e5e211cf7e20c0e17fef572e9 527 Gene3D G3DSA:1.10.1080.10 71 395 1.3E-94 T 11-10-2018 IPR014042 Glutathione synthase, alpha-helical GO:0004363|GO:0005524|GO:0006750|GO:0016874 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|Reactome: R-HSA-174403|Reactome: R-HSA-5579006 VSVS12_03116 74cedd7e5e211cf7e20c0e17fef572e9 527 Pfam PF03199 Eukaryotic glutathione synthase 237 355 3.8E-16 T 11-10-2018 IPR004887 Glutathione synthase, substrate-binding domain GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|Reactome: R-HSA-174403|Reactome: R-HSA-5579006 VSVS12_03116 74cedd7e5e211cf7e20c0e17fef572e9 527 PIRSF PIRSF001558 1 526 1.3E-66 T 11-10-2018 IPR005615 Glutathione synthase GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3|Reactome: R-HSA-174403|Reactome: R-HSA-5579006 VSVS12_03116 74cedd7e5e211cf7e20c0e17fef572e9 527 SUPERFAMILY SSF56059 24 525 2.83E-84 T 11-10-2018 VSVS12_02128 9b5734949210e27415c754533b0b4595 471 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 36 438 1.5E-36 T 11-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 VSVS12_02128 9b5734949210e27415c754533b0b4595 471 Gene3D G3DSA:1.10.4160.10 30 462 8.3E-25 T 11-10-2018 IPR038271 Purine-cytosine permease superfamily VSVS12_02128 9b5734949210e27415c754533b0b4595 471 PIRSF PIRSF002744 5 471 6.7E-86 T 11-10-2018 IPR026030 Purine-cytosine permease Fcy2/21/22 GO:0005215|GO:0016021|GO:0055085 VSVS12_02183 6cee4c3d20186fe16048e1d159b6c3dc 271 Pfam PF08241 Methyltransferase domain 58 154 6.6E-13 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 VSVS12_02183 6cee4c3d20186fe16048e1d159b6c3dc 271 Gene3D G3DSA:3.40.50.150 15 270 2.8E-58 T 11-10-2018 VSVS12_02183 6cee4c3d20186fe16048e1d159b6c3dc 271 SUPERFAMILY SSF53335 12 239 1.0E-33 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_02183 6cee4c3d20186fe16048e1d159b6c3dc 271 Hamap MF_02057 tRNA 5-carboxymethoxyuridine methyltransferase [cmoM]. 9 265 39.981 T 11-10-2018 IPR033664 tRNA 5-carboxymethoxyuridine methyltransferase GO:0008168 VSVS12_02256 413f789e71089daca76ef2426a25fa1d 490 Gene3D G3DSA:1.20.120.1380 253 461 2.6E-57 T 11-10-2018 VSVS12_02256 413f789e71089daca76ef2426a25fa1d 490 SMART SM00382 276 414 1.5E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_02256 413f789e71089daca76ef2426a25fa1d 490 SMART SM00962 277 470 2.1E-64 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VSVS12_02256 413f789e71089daca76ef2426a25fa1d 490 SUPERFAMILY SSF52540 273 465 2.0E-33 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02256 413f789e71089daca76ef2426a25fa1d 490 Pfam PF00448 SRP54-type protein, GTPase domain 279 467 5.5E-39 T 11-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 VSVS12_02256 413f789e71089daca76ef2426a25fa1d 490 Gene3D G3DSA:3.40.50.300 272 458 2.6E-57 T 11-10-2018 VSVS12_02256 413f789e71089daca76ef2426a25fa1d 490 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 1 365 1.3E-79 T 11-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 VSVS12_03866 4c7ba9fb1ab263277ca9d1e1a1abc77d 230 SUPERFAMILY SSF161098 6 219 1.13E-49 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_03866 4c7ba9fb1ab263277ca9d1e1a1abc77d 230 Gene3D G3DSA:1.10.3720.10 1 225 1.3E-58 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_03866 4c7ba9fb1ab263277ca9d1e1a1abc77d 230 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 225 6.9E-22 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VSVS12_03866 4c7ba9fb1ab263277ca9d1e1a1abc77d 230 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 11 221 4.7E-74 T 11-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 VSVS12_01204 fa607188261f54041d6476f89b9d9925 321 SUPERFAMILY SSF53822 49 262 1.65E-20 T 11-10-2018 IPR028082 Periplasmic binding protein-like I VSVS12_01204 fa607188261f54041d6476f89b9d9925 321 Gene3D G3DSA:3.40.50.2300 46 292 1.6E-101 T 11-10-2018 VSVS12_01204 fa607188261f54041d6476f89b9d9925 321 Gene3D G3DSA:3.40.50.2300 143 314 1.6E-101 T 11-10-2018 VSVS12_01204 fa607188261f54041d6476f89b9d9925 321 Pfam PF04392 ABC transporter substrate binding protein 29 321 9.0E-117 T 11-10-2018 IPR007487 ABC transporter, substrate-binding protein VSVS12_01174 9a3349c9c5474a13c4826bc6dd446e6a 277 SUPERFAMILY SSF52540 25 250 3.27E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01174 9a3349c9c5474a13c4826bc6dd446e6a 277 Gene3D G3DSA:3.40.50.300 17 276 5.1E-65 T 11-10-2018 VSVS12_01174 9a3349c9c5474a13c4826bc6dd446e6a 277 SMART SM00382 49 237 7.6E-16 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_01174 9a3349c9c5474a13c4826bc6dd446e6a 277 Pfam PF00005 ABC transporter 40 189 3.1E-26 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_01985 80031d932a89290ced99a0a41d4ba9ba 204 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 138 166 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VSVS12_01985 80031d932a89290ced99a0a41d4ba9ba 204 Gene3D G3DSA:2.160.10.10 1 201 2.2E-69 T 11-10-2018 VSVS12_01985 80031d932a89290ced99a0a41d4ba9ba 204 Pfam PF12464 Maltose acetyltransferase 6 57 4.7E-13 T 11-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 VSVS12_01985 80031d932a89290ced99a0a41d4ba9ba 204 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 130 164 3.0E-12 T 11-10-2018 IPR001451 Hexapeptide repeat VSVS12_01985 80031d932a89290ced99a0a41d4ba9ba 204 SMART SM01266 4 58 4.0E-15 T 11-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 VSVS12_01985 80031d932a89290ced99a0a41d4ba9ba 204 SUPERFAMILY SSF51161 6 194 2.08E-53 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily VSVS12_00002 1d39e6c0d70924243402705c1e596323 434 Pfam PF01554 MatE 237 391 3.3E-16 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VSVS12_00002 1d39e6c0d70924243402705c1e596323 434 Pfam PF01554 MatE 11 171 2.2E-24 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VSVS12_00002 1d39e6c0d70924243402705c1e596323 434 TIGRFAM TIGR00797 matE: MATE efflux family protein 11 405 4.3E-72 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VSVS12_03966 30d206b6a26797ae231d02ccef8f26b8 427 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 10 410 5.9E-109 T 11-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 VSVS12_03966 30d206b6a26797ae231d02ccef8f26b8 427 Pfam PF05525 Branched-chain amino acid transport protein 3 423 9.5E-117 T 11-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 VSVS12_02585 24c74920ef8e70c0f06e6b4b9709f9fd 150 PIRSF PIRSF006318 1 138 1.5E-48 T 11-10-2018 IPR009386 Protein of unknown function DUF1043 VSVS12_02585 24c74920ef8e70c0f06e6b4b9709f9fd 150 Pfam PF06295 Protein of unknown function (DUF1043) 6 132 6.4E-44 T 11-10-2018 IPR009386 Protein of unknown function DUF1043 VSVS12_02292 ea46b3282891c3dddc32f228a4c65724 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 203 222 1.3E-16 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VSVS12_02292 ea46b3282891c3dddc32f228a4c65724 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 181 203 1.3E-16 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VSVS12_02292 ea46b3282891c3dddc32f228a4c65724 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 21 42 1.3E-16 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VSVS12_02292 ea46b3282891c3dddc32f228a4c65724 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 81 100 1.3E-16 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VSVS12_02292 ea46b3282891c3dddc32f228a4c65724 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 12 255 6.8E-75 T 11-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 VSVS12_02292 ea46b3282891c3dddc32f228a4c65724 260 Pfam PF01311 Bacterial export proteins, family 1 13 244 2.4E-57 T 11-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 VSVS12_03939 b0f05eb2cf17f0b47c263a753ed5672f 45 Pfam PF09574 Protein of unknown function (Duf2374) 1 42 3.2E-25 T 11-10-2018 IPR014175 Conserved hypothetical protein CHP02808 VSVS12_03939 b0f05eb2cf17f0b47c263a753ed5672f 45 TIGRFAM TIGR02808 short_TIGR02808: TIGR02808 family protein 1 42 1.7E-25 T 11-10-2018 IPR014175 Conserved hypothetical protein CHP02808 VSVS12_00178 de0359cfd08fc4e3bf1cd7d9f355bcff 485 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 468 4.1E-115 T 11-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 VSVS12_00178 de0359cfd08fc4e3bf1cd7d9f355bcff 485 PIRSF PIRSF006247 1 485 1.9E-174 T 11-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 VSVS12_00178 de0359cfd08fc4e3bf1cd7d9f355bcff 485 Pfam PF02386 Cation transport protein 39 477 2.3E-87 T 11-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 VSVS12_00380 eeb1794f65803b08de593c1b516508d8 426 Pfam PF01943 Polysaccharide biosynthesis protein 8 288 7.1E-16 T 11-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 VSVS12_00823 7e4dcd60e3fbc492ab93f8943cb60caa 458 Gene3D G3DSA:1.20.1250.20 11 214 1.8E-11 T 11-10-2018 VSVS12_00823 7e4dcd60e3fbc492ab93f8943cb60caa 458 Gene3D G3DSA:1.20.1250.20 246 439 5.1E-9 T 11-10-2018 VSVS12_00823 7e4dcd60e3fbc492ab93f8943cb60caa 458 SUPERFAMILY SSF103473 12 434 1.31E-37 T 11-10-2018 IPR036259 MFS transporter superfamily VSVS12_00823 7e4dcd60e3fbc492ab93f8943cb60caa 458 Pfam PF07690 Major Facilitator Superfamily 23 395 2.6E-17 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VSVS12_00457 1bea134f1f2e8696312849f0d17c8364 324 Pfam PF00561 alpha/beta hydrolase fold 61 300 2.7E-14 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VSVS12_00457 1bea134f1f2e8696312849f0d17c8364 324 SUPERFAMILY SSF53474 30 299 1.96E-37 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold VSVS12_00457 1bea134f1f2e8696312849f0d17c8364 324 PIRSF PIRSF005211 1 324 1.2E-102 T 11-10-2018 IPR012020 AB hydrolase 4 family VSVS12_02720 a97a2b6ec98dd81bbe7d15f1f29c1abc 392 Gene3D G3DSA:1.10.150.130 70 160 2.5E-5 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal VSVS12_02720 a97a2b6ec98dd81bbe7d15f1f29c1abc 392 Gene3D G3DSA:1.10.443.10 179 383 6.0E-19 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VSVS12_02720 a97a2b6ec98dd81bbe7d15f1f29c1abc 392 SUPERFAMILY SSF56349 71 373 3.53E-24 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VSVS12_02720 a97a2b6ec98dd81bbe7d15f1f29c1abc 392 Pfam PF00589 Phage integrase family 207 371 9.4E-10 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VSVS12_01737 63ee83851ba0d78085fe46091e250ac3 456 PIRSF PIRSF006603 5 450 6.3E-61 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VSVS12_01737 63ee83851ba0d78085fe46091e250ac3 456 Pfam PF01554 MatE 17 176 1.1E-33 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VSVS12_01737 63ee83851ba0d78085fe46091e250ac3 456 Pfam PF01554 MatE 243 404 2.2E-37 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VSVS12_01737 63ee83851ba0d78085fe46091e250ac3 456 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 421 3.2E-116 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VSVS12_03607 9ccbf83b87e4ab30a6c10af79d7700d5 296 Pfam PF00892 EamA-like transporter family 139 275 1.3E-9 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VSVS12_03607 9ccbf83b87e4ab30a6c10af79d7700d5 296 Pfam PF00892 EamA-like transporter family 3 128 1.9E-14 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VSVS12_03607 9ccbf83b87e4ab30a6c10af79d7700d5 296 SUPERFAMILY SSF103481 194 271 3.27E-7 T 11-10-2018 VSVS12_03607 9ccbf83b87e4ab30a6c10af79d7700d5 296 SUPERFAMILY SSF103481 42 129 5.75E-7 T 11-10-2018 VSVS12_02879 bd3cd5911fbe3a7346413c2e27089bb3 550 Pfam PF00342 Phosphoglucose isomerase 53 542 3.0E-253 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02879 bd3cd5911fbe3a7346413c2e27089bb3 550 SUPERFAMILY SSF53697 6 548 3.89E-223 T 11-10-2018 VSVS12_02879 bd3cd5911fbe3a7346413c2e27089bb3 550 Gene3D G3DSA:3.40.50.10490 99 292 1.7E-240 T 11-10-2018 VSVS12_02879 bd3cd5911fbe3a7346413c2e27089bb3 550 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 266 279 - T 11-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02879 bd3cd5911fbe3a7346413c2e27089bb3 550 Gene3D G3DSA:3.40.50.10490 13 507 1.7E-240 T 11-10-2018 VSVS12_02879 bd3cd5911fbe3a7346413c2e27089bb3 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 151 170 7.6E-56 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02879 bd3cd5911fbe3a7346413c2e27089bb3 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 484 498 7.6E-56 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02879 bd3cd5911fbe3a7346413c2e27089bb3 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 262 280 7.6E-56 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02879 bd3cd5911fbe3a7346413c2e27089bb3 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 498 511 7.6E-56 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02879 bd3cd5911fbe3a7346413c2e27089bb3 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 466 484 7.6E-56 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02879 bd3cd5911fbe3a7346413c2e27089bb3 550 PRINTS PR00662 Glucose-6-phosphate isomerase signature 339 360 7.6E-56 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02879 bd3cd5911fbe3a7346413c2e27089bb3 550 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 498 515 - T 11-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02879 bd3cd5911fbe3a7346413c2e27089bb3 550 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 47 525 42.98 T 11-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02879 bd3cd5911fbe3a7346413c2e27089bb3 550 Gene3D G3DSA:1.10.1390.10 508 548 5.6E-20 T 11-10-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_03091 432f4036f50dc0b12f6274ded97af553 291 SUPERFAMILY SSF48452 171 280 1.1E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_03091 432f4036f50dc0b12f6274ded97af553 291 SMART SM00028 221 254 0.038 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_03091 432f4036f50dc0b12f6274ded97af553 291 SMART SM00028 187 220 1.8 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_03091 432f4036f50dc0b12f6274ded97af553 291 Gene3D G3DSA:1.25.40.10 98 277 5.5E-17 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_00384 b877ec57451d9b2eaaad6610546963d2 203 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 117 145 - T 11-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 VSVS12_00384 b877ec57451d9b2eaaad6610546963d2 203 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 109 143 2.5E-6 T 11-10-2018 IPR001451 Hexapeptide repeat VSVS12_00384 b877ec57451d9b2eaaad6610546963d2 203 SUPERFAMILY SSF51161 40 186 5.41E-37 T 11-10-2018 IPR011004 Trimeric LpxA-like superfamily VSVS12_00384 b877ec57451d9b2eaaad6610546963d2 203 Gene3D G3DSA:2.160.10.10 7 199 5.8E-52 T 11-10-2018 VSVS12_00550 7d21bfd15cb91328762fb1ef3a5c6861 104 Gene3D G3DSA:3.30.750.24 13 101 2.0E-12 T 11-10-2018 IPR036513 STAS domain superfamily VSVS12_00550 7d21bfd15cb91328762fb1ef3a5c6861 104 Pfam PF13466 STAS domain 16 93 2.4E-18 T 11-10-2018 IPR002645 STAS domain VSVS12_00550 7d21bfd15cb91328762fb1ef3a5c6861 104 SUPERFAMILY SSF52091 14 97 9.61E-16 T 11-10-2018 IPR036513 STAS domain superfamily VSVS12_00249 ec1289d4894a2a9c0f0231f3498a42c2 481 Pfam PF02386 Cation transport protein 45 475 2.1E-51 T 11-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 VSVS12_00249 ec1289d4894a2a9c0f0231f3498a42c2 481 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 85 464 4.7E-112 T 11-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 VSVS12_00249 ec1289d4894a2a9c0f0231f3498a42c2 481 PIRSF PIRSF006247 1 481 1.4E-166 T 11-10-2018 IPR004772 TrkH potassium transport family GO:0015379|GO:0016021|GO:0071805 VSVS12_03162 853597f17c1f66a0c8f45cadf950c203 247 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 111 210 1.5E-14 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VSVS12_03162 853597f17c1f66a0c8f45cadf950c203 247 SUPERFAMILY SSF56784 23 239 3.12E-46 T 11-10-2018 IPR036412 HAD-like superfamily VSVS12_03162 853597f17c1f66a0c8f45cadf950c203 247 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 152 168 1.2E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VSVS12_03162 853597f17c1f66a0c8f45cadf950c203 247 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 121 134 1.2E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VSVS12_03162 853597f17c1f66a0c8f45cadf950c203 247 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 199 212 1.2E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VSVS12_03162 853597f17c1f66a0c8f45cadf950c203 247 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 25 36 1.2E-5 T 11-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 VSVS12_03162 853597f17c1f66a0c8f45cadf950c203 247 Gene3D G3DSA:1.10.150.240 38 108 4.0E-49 T 11-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 VSVS12_03162 853597f17c1f66a0c8f45cadf950c203 247 Gene3D G3DSA:3.40.50.1000 26 229 4.0E-49 T 11-10-2018 IPR023214 HAD superfamily VSVS12_03162 853597f17c1f66a0c8f45cadf950c203 247 Pfam PF13419 Haloacid dehalogenase-like hydrolase 28 210 3.3E-33 T 11-10-2018 VSVS12_04241 d4c72a50cf5622728f4f4aa710c751c3 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 11-10-2018 IPR019844 Cold-shock conserved site VSVS12_04241 d4c72a50cf5622728f4f4aa710c751c3 70 PRINTS PR00050 Cold shock protein signature 7 22 2.8E-16 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VSVS12_04241 d4c72a50cf5622728f4f4aa710c751c3 70 PRINTS PR00050 Cold shock protein signature 28 37 2.8E-16 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VSVS12_04241 d4c72a50cf5622728f4f4aa710c751c3 70 PRINTS PR00050 Cold shock protein signature 43 61 2.8E-16 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VSVS12_04241 d4c72a50cf5622728f4f4aa710c751c3 70 Gene3D G3DSA:2.40.50.140 2 69 3.1E-30 T 11-10-2018 VSVS12_04241 d4c72a50cf5622728f4f4aa710c751c3 70 SUPERFAMILY SSF50249 4 69 3.43E-25 T 11-10-2018 IPR012340 Nucleic acid-binding, OB-fold VSVS12_04241 d4c72a50cf5622728f4f4aa710c751c3 70 PIRSF PIRSF002599 1 70 1.1E-24 T 11-10-2018 IPR012156 Cold shock, CspA GO:0003676 VSVS12_04241 d4c72a50cf5622728f4f4aa710c751c3 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 1.2E-30 T 11-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 VSVS12_04241 d4c72a50cf5622728f4f4aa710c751c3 70 SMART SM00357 6 70 2.2E-29 T 11-10-2018 IPR011129 Cold shock domain GO:0003676 VSVS12_03150 ff88d87f2610d94c9a49c0066b105eb3 320 SUPERFAMILY SSF143422 16 192 1.57E-19 T 11-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 VSVS12_03150 ff88d87f2610d94c9a49c0066b105eb3 320 SMART SM01321 13 187 0.002 T 11-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 VSVS12_03119 723d04f65263a9814ea5a0130b5fc18e 380 Gene3D G3DSA:2.40.160.50 125 378 1.0E-9 T 11-10-2018 VSVS12_03119 723d04f65263a9814ea5a0130b5fc18e 380 Pfam PF01103 Surface antigen 95 311 8.6E-8 T 11-10-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 VSVS12_01927 966df15bae5b24de80a6b8983dbc4a52 595 ProSitePatterns PS00211 ABC transporters family signature. 484 498 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_01927 966df15bae5b24de80a6b8983dbc4a52 595 Gene3D G3DSA:1.20.1560.10 1 333 3.2E-49 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VSVS12_01927 966df15bae5b24de80a6b8983dbc4a52 595 SUPERFAMILY SSF90123 5 330 5.76E-55 T 11-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 VSVS12_01927 966df15bae5b24de80a6b8983dbc4a52 595 SUPERFAMILY SSF52540 361 580 9.46E-61 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01927 966df15bae5b24de80a6b8983dbc4a52 595 Pfam PF00005 ABC transporter 368 512 2.9E-27 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_01927 966df15bae5b24de80a6b8983dbc4a52 595 Gene3D G3DSA:3.40.50.300 343 594 8.4E-66 T 11-10-2018 VSVS12_01927 966df15bae5b24de80a6b8983dbc4a52 595 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 20 554 4.4E-176 T 11-10-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 VSVS12_01927 966df15bae5b24de80a6b8983dbc4a52 595 Pfam PF00664 ABC transporter transmembrane region 25 292 1.5E-38 T 11-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 VSVS12_01927 966df15bae5b24de80a6b8983dbc4a52 595 SMART SM00382 375 558 3.3E-13 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_04596 cc5a9052c1cb5282437ef9c8e24fb5f1 175 SMART SM00945 66 172 0.0082 T 11-10-2018 IPR016103 ProQ/FinO domain VSVS12_04596 cc5a9052c1cb5282437ef9c8e24fb5f1 175 Pfam PF04352 ProQ/FINO family 69 175 1.2E-15 T 11-10-2018 IPR016103 ProQ/FinO domain VSVS12_04596 cc5a9052c1cb5282437ef9c8e24fb5f1 175 SUPERFAMILY SSF48657 61 174 8.63E-19 T 11-10-2018 IPR036442 ProQ/FinO domain superfamily VSVS12_04596 cc5a9052c1cb5282437ef9c8e24fb5f1 175 Gene3D G3DSA:1.10.1710.10 22 175 1.6E-16 T 11-10-2018 IPR036442 ProQ/FinO domain superfamily VSVS12_02431 62916445abbdb32d5c07c0350aad3a35 511 Gene3D G3DSA:3.40.630.30 4 221 2.8E-48 T 11-10-2018 VSVS12_02431 62916445abbdb32d5c07c0350aad3a35 511 SUPERFAMILY SSF56317 222 491 2.75E-59 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VSVS12_02431 62916445abbdb32d5c07c0350aad3a35 511 SUPERFAMILY SSF55729 6 140 4.97E-16 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_02431 62916445abbdb32d5c07c0350aad3a35 511 Pfam PF00795 Carbon-nitrogen hydrolase 225 484 8.5E-34 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 VSVS12_02431 62916445abbdb32d5c07c0350aad3a35 511 Gene3D G3DSA:3.60.110.10 222 507 1.3E-60 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VSVS12_02431 62916445abbdb32d5c07c0350aad3a35 511 Pfam PF00583 Acetyltransferase (GNAT) family 47 137 1.1E-6 T 11-10-2018 IPR000182 GNAT domain VSVS12_00024 36e01b33fda99c883d6b5baee4bef133 337 Pfam PF01757 Acyltransferase family 7 328 1.7E-30 T 11-10-2018 IPR002656 Acyltransferase 3 GO:0016747 VSVS12_04407 353949c46a1a9a64d8eee8d49e4ea24f 110 Pfam PF07798 Protein of unknown function (DUF1640) 22 51 2.2E-6 T 11-10-2018 IPR024461 Coiled-coil domain-containing protein 90-like VSVS12_01472 68f12f517ab8cff9ab318a3427e99f12 400 Gene3D G3DSA:1.20.1250.20 207 391 5.0E-12 T 11-10-2018 VSVS12_01472 68f12f517ab8cff9ab318a3427e99f12 400 Gene3D G3DSA:1.20.1250.20 3 188 1.0E-21 T 11-10-2018 VSVS12_01472 68f12f517ab8cff9ab318a3427e99f12 400 Pfam PF07690 Major Facilitator Superfamily 12 344 1.3E-24 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VSVS12_01472 68f12f517ab8cff9ab318a3427e99f12 400 SUPERFAMILY SSF103473 6 389 1.7E-40 T 11-10-2018 IPR036259 MFS transporter superfamily VSVS12_03113 c5b9741fdbc221d4b4b080993412abf7 397 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 84 130 3.1E-11 T 11-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain VSVS12_03113 c5b9741fdbc221d4b4b080993412abf7 397 Pfam PF01610 Transposase 149 388 9.1E-64 T 11-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain VSVS12_01668 85289b5c467f5adc6f0aa5069fae18b5 72 Pfam PF11197 Protein of unknown function (DUF2835) 4 70 1.2E-26 T 11-10-2018 IPR021363 Protein of unknown function DUF2835 VSVS12_00288 4e30661b4682eb2b8748a6027d878e94 292 Pfam PF11356 Type II secretion system protein C 28 167 9.6E-35 T 11-10-2018 IPR024961 Type II secretion system protein C, N-terminal VSVS12_00288 4e30661b4682eb2b8748a6027d878e94 292 TIGRFAM TIGR01713 typeII_sec_gspC: type II secretion system protein C 25 292 1.9E-70 T 11-10-2018 IPR001639 Type II secretion system protein C GO:0008565|GO:0015627|GO:0015628 VSVS12_00288 4e30661b4682eb2b8748a6027d878e94 292 SUPERFAMILY SSF50156 196 292 5.89E-16 T 11-10-2018 IPR036034 PDZ superfamily GO:0005515 VSVS12_00288 4e30661b4682eb2b8748a6027d878e94 292 Gene3D G3DSA:2.30.30.830 101 168 1.6E-25 T 11-10-2018 VSVS12_00288 4e30661b4682eb2b8748a6027d878e94 292 Gene3D G3DSA:2.30.42.10 188 292 1.7E-27 T 11-10-2018 VSVS12_02432 b8e998c73852e12d4c0707bc1abea4a8 664 SMART SM00283 397 658 1.4E-55 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_02432 b8e998c73852e12d4c0707bc1abea4a8 664 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 524 553 2.6E-6 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VSVS12_02432 b8e998c73852e12d4c0707bc1abea4a8 664 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 411 440 2.6E-6 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VSVS12_02432 b8e998c73852e12d4c0707bc1abea4a8 664 Gene3D G3DSA:1.10.287.950 332 660 2.3E-62 T 11-10-2018 VSVS12_02432 b8e998c73852e12d4c0707bc1abea4a8 664 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 457 623 8.1E-39 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_02432 b8e998c73852e12d4c0707bc1abea4a8 664 SUPERFAMILY SSF58104 350 659 4.97E-64 T 11-10-2018 VSVS12_02272 1f8acbdf2f9c4c18078d72ee63ff98ed 183 SUPERFAMILY SSF110997 106 179 4.97E-14 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VSVS12_02272 1f8acbdf2f9c4c18078d72ee63ff98ed 183 Pfam PF05036 Sporulation related domain 107 170 4.2E-11 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 VSVS12_02272 1f8acbdf2f9c4c18078d72ee63ff98ed 183 Gene3D G3DSA:3.30.70.1070 101 175 1.2E-9 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VSVS12_02108 0b6b74e754bbb2140171f590faa9290b 325 Pfam PF03150 Di-haem cytochrome c peroxidase 50 194 3.3E-40 T 11-10-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 VSVS12_02108 0b6b74e754bbb2140171f590faa9290b 325 SUPERFAMILY SSF46626 181 316 6.28E-33 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VSVS12_02108 0b6b74e754bbb2140171f590faa9290b 325 Gene3D G3DSA:1.10.760.10 48 180 5.4E-92 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VSVS12_02108 0b6b74e754bbb2140171f590faa9290b 325 SUPERFAMILY SSF46626 36 182 1.75E-38 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VSVS12_02108 0b6b74e754bbb2140171f590faa9290b 325 Gene3D G3DSA:1.10.760.10 181 313 5.4E-92 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VSVS12_02108 0b6b74e754bbb2140171f590faa9290b 325 PIRSF PIRSF000294 1 320 6.6E-81 T 11-10-2018 IPR026259 Di-c-type haem protein, MauG/cytochrome c peroxidase GO:0016491|GO:0020037|GO:0055114 VSVS12_00405 32ac4ba6f86e0f0ca8d0afcc49c17253 334 Pfam PF02706 Chain length determinant protein 27 129 3.0E-19 T 11-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 VSVS12_00405 32ac4ba6f86e0f0ca8d0afcc49c17253 334 Pfam PF13807 G-rich domain on putative tyrosine kinase 255 319 4.7E-9 T 11-10-2018 IPR032807 Tyrosine kinase, G-rich domain VSVS12_04320 b9ca5c75c22eb816888804f2551978c4 226 SUPERFAMILY SSF51206 22 147 1.44E-21 T 11-10-2018 IPR018490 Cyclic nucleotide-binding-like VSVS12_04320 b9ca5c75c22eb816888804f2551978c4 226 Gene3D G3DSA:2.60.120.10 12 144 2.1E-16 T 11-10-2018 IPR014710 RmlC-like jelly roll fold VSVS12_04320 b9ca5c75c22eb816888804f2551978c4 226 Pfam PF00027 Cyclic nucleotide-binding domain 34 108 3.1E-13 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain VSVS12_04320 b9ca5c75c22eb816888804f2551978c4 226 SMART SM00100 14 134 7.2E-4 T 11-10-2018 IPR000595 Cyclic nucleotide-binding domain VSVS12_01839 623920141d8ef73e3ef7e2f32ea6904e 733 SUPERFAMILY SSF141868 477 725 2.35E-66 T 11-10-2018 IPR035919 EAL domain superfamily VSVS12_01839 623920141d8ef73e3ef7e2f32ea6904e 733 Gene3D G3DSA:3.20.20.450 467 721 4.0E-72 T 11-10-2018 IPR035919 EAL domain superfamily VSVS12_01839 623920141d8ef73e3ef7e2f32ea6904e 733 SMART SM00052 460 718 3.5E-58 T 11-10-2018 IPR001633 EAL domain VSVS12_01839 623920141d8ef73e3ef7e2f32ea6904e 733 Pfam PF00563 EAL domain 478 713 2.3E-58 T 11-10-2018 IPR001633 EAL domain VSVS12_04497 9c90efff45fec7bb76a515787619985e 332 Gene3D G3DSA:3.30.420.10 109 258 8.1E-12 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VSVS12_04497 9c90efff45fec7bb76a515787619985e 332 Gene3D G3DSA:1.10.10.60 1 34 1.0E-6 T 11-10-2018 VSVS12_04497 9c90efff45fec7bb76a515787619985e 332 SUPERFAMILY SSF53098 111 282 2.85E-16 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_04497 9c90efff45fec7bb76a515787619985e 332 Pfam PF00665 Integrase core domain 111 236 1.6E-25 T 11-10-2018 IPR001584 Integrase, catalytic core GO:0015074 VSVS12_04497 9c90efff45fec7bb76a515787619985e 332 Pfam PF13384 Homeodomain-like domain 5 33 9.7E-8 T 11-10-2018 VSVS12_02971 f5443a5732a1467d6f7818f88044ceef 87 Pfam PF13937 Domain of unknown function (DUF4212) 9 86 9.2E-36 T 11-10-2018 IPR019886 Sodium symporter small subunit, predicted VSVS12_02971 f5443a5732a1467d6f7818f88044ceef 87 TIGRFAM TIGR03647 Na_symport_sm: putative solute:sodium symporter small subunit 11 87 8.3E-37 T 11-10-2018 IPR019886 Sodium symporter small subunit, predicted VSVS12_00889 1d9b9bc84a5045c032272015aee931f3 155 Hamap MF_00042 Ribonuclease H [rnhA]. 2 150 35.709 T 11-10-2018 IPR022892 Ribonuclease HI GO:0004523 VSVS12_00889 1d9b9bc84a5045c032272015aee931f3 155 Pfam PF00075 RNase H 3 141 6.6E-52 T 11-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 VSVS12_00889 1d9b9bc84a5045c032272015aee931f3 155 Gene3D G3DSA:3.30.420.10 1 154 2.6E-58 T 11-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 VSVS12_00889 1d9b9bc84a5045c032272015aee931f3 155 SUPERFAMILY SSF53098 3 143 1.39E-56 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_03279 7f517a381a07ee1810cbaa4c59e4ab5f 170 Pfam PF07007 Lysozyme inhibitor LprI 70 140 1.8E-9 T 11-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal VSVS12_01120 721b906f742af30e372367d80d4f3ec6 270 Pfam PF13614 AAA domain 3 159 9.7E-20 T 11-10-2018 IPR025669 AAA domain VSVS12_01120 721b906f742af30e372367d80d4f3ec6 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 3.4E-110 T 11-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 VSVS12_01120 721b906f742af30e372367d80d4f3ec6 270 PIRSF PIRSF003092 1 270 1.5E-94 T 11-10-2018 IPR025501 ATP binding protein MinD VSVS12_01120 721b906f742af30e372367d80d4f3ec6 270 Gene3D G3DSA:3.40.50.300 1 260 8.7E-74 T 11-10-2018 VSVS12_01120 721b906f742af30e372367d80d4f3ec6 270 SUPERFAMILY SSF52540 1 268 3.81E-53 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03752 ee5c3e1d1b6c2dbcaf959c6d90ffe13e 541 Pfam PF11658 Cellulose biosynthesis protein BcsG 18 536 3.1E-208 T 11-10-2018 IPR017744 Cellulose biosynthesis protein BcsG VSVS12_03752 ee5c3e1d1b6c2dbcaf959c6d90ffe13e 541 Gene3D G3DSA:3.40.720.10 197 498 1.1E-5 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VSVS12_03752 ee5c3e1d1b6c2dbcaf959c6d90ffe13e 541 TIGRFAM TIGR03368 cellulose_yhjU: cellulose synthase operon protein YhjU 16 539 3.1E-220 T 11-10-2018 IPR017744 Cellulose biosynthesis protein BcsG VSVS12_01872 80d12ab4f63d981bdafb222e26efd23e 293 SUPERFAMILY SSF51366 44 261 3.11E-9 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VSVS12_04566 a0c3dde705f892ab82f11965a35bbffc 266 Pfam PF02517 CAAX protease self-immunity 164 253 3.1E-18 T 11-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 VSVS12_01355 9b3865efbf2700980720ea642a0d7e9e 179 Gene3D G3DSA:3.40.50.1820 1 179 6.2E-21 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold VSVS12_01355 9b3865efbf2700980720ea642a0d7e9e 179 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 2.8E-67 T 11-10-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA VSVS12_01355 9b3865efbf2700980720ea642a0d7e9e 179 SUPERFAMILY SSF53474 2 176 3.39E-7 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold VSVS12_01355 9b3865efbf2700980720ea642a0d7e9e 179 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 48.946 T 11-10-2018 IPR022987 Uncharacterised protein family UPF0227 VSVS12_01904 cf20292fc5ce727c73a782e2b44c6ab3 120 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 5 120 7.5E-35 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 VSVS12_01904 cf20292fc5ce727c73a782e2b44c6ab3 120 PIRSF PIRSF006113 1 120 1.0E-52 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 VSVS12_01904 cf20292fc5ce727c73a782e2b44c6ab3 120 SUPERFAMILY SSF55620 1 118 7.23E-41 T 11-10-2018 VSVS12_01904 cf20292fc5ce727c73a782e2b44c6ab3 120 Gene3D G3DSA:3.30.479.10 1 120 2.1E-49 T 11-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 VSVS12_01904 cf20292fc5ce727c73a782e2b44c6ab3 120 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 4 96 2.3E-32 T 11-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 VSVS12_00336 01aa5de18643f5c8e9e9e09b29364868 264 Pfam PF00535 Glycosyl transferase family 2 11 128 3.0E-16 T 11-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 VSVS12_00336 01aa5de18643f5c8e9e9e09b29364868 264 Gene3D G3DSA:3.90.550.10 1 172 1.2E-20 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VSVS12_00336 01aa5de18643f5c8e9e9e09b29364868 264 SUPERFAMILY SSF53448 6 142 1.72E-24 T 11-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases VSVS12_02311 913ffcbb763bbb238cd342b6a5272587 679 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 10 107 2.2E-21 T 11-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 VSVS12_02311 913ffcbb763bbb238cd342b6a5272587 679 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 443 668 3.6E-50 T 11-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 VSVS12_02311 913ffcbb763bbb238cd342b6a5272587 679 Pfam PF07196 Flagellin hook IN motif 125 178 5.7E-8 T 11-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 VSVS12_00624 32ce4ce945e67582f8afd10520720661 266 SUPERFAMILY SSF49785 3 156 5.1E-21 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily VSVS12_00624 32ce4ce945e67582f8afd10520720661 266 Gene3D G3DSA:2.60.120.260 24 156 2.9E-11 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily VSVS12_01441 f1ecaf646e8bf4d69239b1b4a19f2e13 290 Gene3D G3DSA:3.40.1090.10 1 105 2.4E-21 T 11-10-2018 VSVS12_01441 f1ecaf646e8bf4d69239b1b4a19f2e13 290 Pfam PF01734 Patatin-like phospholipase 7 164 8.0E-21 T 11-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 VSVS12_01441 f1ecaf646e8bf4d69239b1b4a19f2e13 290 SUPERFAMILY SSF52151 3 279 2.62E-49 T 11-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase VSVS12_01441 f1ecaf646e8bf4d69239b1b4a19f2e13 290 Gene3D G3DSA:3.40.1090.20 125 182 2.9E-5 T 11-10-2018 VSVS12_02595 eef23f454d5f7c56e2d2586686618dd3 424 SUPERFAMILY SSF53098 92 361 1.52E-26 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_02595 eef23f454d5f7c56e2d2586686618dd3 424 Pfam PF13006 Insertion element 4 transposase N-terminal 19 109 4.7E-27 T 11-10-2018 IPR024473 Transposase, IS4, N-terminal VSVS12_02595 eef23f454d5f7c56e2d2586686618dd3 424 Pfam PF01609 Transposase DDE domain 129 352 8.9E-21 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_04324 1c97eca25d698f573113368b6c545491 82 SUPERFAMILY SSF54427 2 79 1.03E-12 T 11-10-2018 IPR032710 NTF2-like domain superfamily VSVS12_04324 1c97eca25d698f573113368b6c545491 82 Pfam PF13577 SnoaL-like domain 3 43 2.9E-5 T 11-10-2018 IPR037401 SnoaL-like domain VSVS12_04324 1c97eca25d698f573113368b6c545491 82 Gene3D G3DSA:3.10.450.50 1 61 2.9E-10 T 11-10-2018 VSVS12_01526 e66b3bb4439f15720bc4f8e25e1f4354 94 Gene3D G3DSA:1.10.1370.30 2 94 5.1E-33 T 11-10-2018 VSVS12_01526 e66b3bb4439f15720bc4f8e25e1f4354 94 SUPERFAMILY SSF55486 4 94 2.69E-20 T 11-10-2018 VSVS12_01526 e66b3bb4439f15720bc4f8e25e1f4354 94 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 45 63 5.5E-6 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VSVS12_01526 e66b3bb4439f15720bc4f8e25e1f4354 94 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 1 22 5.5E-6 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VSVS12_01526 e66b3bb4439f15720bc4f8e25e1f4354 94 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 5 92 1.4E-14 T 11-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 VSVS12_02950 4eb02d87684ad87b5166fa997b81fdab 115 Gene3D G3DSA:3.30.429.10 1 115 7.0E-35 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily VSVS12_02950 4eb02d87684ad87b5166fa997b81fdab 115 Pfam PF02962 5-carboxymethyl-2-hydroxymuconate isomerase 2 91 9.6E-7 T 11-10-2018 IPR004220 5-carboxymethyl-2-hydroxymuconate isomerase GO:0008704|GO:0019439 KEGG: 00350+5.3.3.10 VSVS12_02950 4eb02d87684ad87b5166fa997b81fdab 115 SUPERFAMILY SSF55331 2 115 8.64E-36 T 11-10-2018 IPR014347 Tautomerase/MIF superfamily VSVS12_00072 f5abb6f41ae49bca2c0f3c72714c55bb 265 SUPERFAMILY SSF46689 168 215 2.64E-10 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_00072 f5abb6f41ae49bca2c0f3c72714c55bb 265 SMART SM00342 182 264 1.3E-27 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VSVS12_00072 f5abb6f41ae49bca2c0f3c72714c55bb 265 Gene3D G3DSA:1.10.10.60 167 265 8.5E-29 T 11-10-2018 VSVS12_00072 f5abb6f41ae49bca2c0f3c72714c55bb 265 SUPERFAMILY SSF46689 218 263 2.82E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_00072 f5abb6f41ae49bca2c0f3c72714c55bb 265 Pfam PF12833 Helix-turn-helix domain 188 262 1.7E-21 T 11-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 VSVS12_00072 f5abb6f41ae49bca2c0f3c72714c55bb 265 SUPERFAMILY SSF51215 24 138 1.09E-18 T 11-10-2018 IPR037923 Transcription regulator HTH-like VSVS12_00072 f5abb6f41ae49bca2c0f3c72714c55bb 265 Pfam PF02311 AraC-like ligand binding domain 16 142 6.9E-23 T 11-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 VSVS12_03911 28148c72c812815709bfae3b38381868 77 Pfam PF11869 Protein of unknown function (DUF3389) 1 76 1.7E-32 T 11-10-2018 IPR021811 Protein of unknown function DUF3389 VSVS12_03819 bb456776c40b17f671c2f74cb4f5ac96 246 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 244 5.7E-58 T 11-10-2018 VSVS12_03819 bb456776c40b17f671c2f74cb4f5ac96 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 11-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 VSVS12_03819 bb456776c40b17f671c2f74cb4f5ac96 246 SUPERFAMILY SSF51735 2 245 3.39E-77 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_03819 bb456776c40b17f671c2f74cb4f5ac96 246 TIGRFAM TIGR01829 AcAcCoA_reduct: acetoacetyl-CoA reductase 3 245 4.1E-112 T 11-10-2018 IPR011283 Acetoacetyl-CoA reductase GO:0005737|GO:0018454|GO:0042619|GO:0055114 KEGG: 00630+1.1.1.36|KEGG: 00650+1.1.1.36|MetaCyc: PWY-5676|MetaCyc: PWY-5741|MetaCyc: PWY-7216|MetaCyc: PWY-7948 VSVS12_03819 bb456776c40b17f671c2f74cb4f5ac96 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 9.3E-46 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_03819 bb456776c40b17f671c2f74cb4f5ac96 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 9.3E-46 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_03819 bb456776c40b17f671c2f74cb4f5ac96 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 9.3E-46 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_03819 bb456776c40b17f671c2f74cb4f5ac96 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 9.3E-46 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_03819 bb456776c40b17f671c2f74cb4f5ac96 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 9.3E-46 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_03819 bb456776c40b17f671c2f74cb4f5ac96 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 9.3E-46 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_03819 bb456776c40b17f671c2f74cb4f5ac96 246 Gene3D G3DSA:3.40.50.720 1 246 5.0E-76 T 11-10-2018 VSVS12_03819 bb456776c40b17f671c2f74cb4f5ac96 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 2.5E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_03819 bb456776c40b17f671c2f74cb4f5ac96 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 2.5E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_03819 bb456776c40b17f671c2f74cb4f5ac96 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 2.5E-15 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_03819 bb456776c40b17f671c2f74cb4f5ac96 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 186 3.6E-4 T 11-10-2018 VSVS12_03030 5759ad44759b09bf9a50bd157d9f3ca6 366 Pfam PF08308 PEGA domain 297 361 2.7E-22 T 11-10-2018 IPR013229 PEGA VSVS12_00689 b7192902350f78f3fbf3122ba522e526 377 PIRSF PIRSF006078 1 376 2.9E-142 T 11-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 VSVS12_00689 b7192902350f78f3fbf3122ba522e526 377 SUPERFAMILY SSF110738 1 375 4.45E-145 T 11-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 VSVS12_00689 b7192902350f78f3fbf3122ba522e526 377 Gene3D G3DSA:3.90.1510.10 42 276 5.3E-144 T 11-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 VSVS12_00689 b7192902350f78f3fbf3122ba522e526 377 Pfam PF02595 Glycerate kinase family 3 373 1.6E-153 T 11-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 VSVS12_00689 b7192902350f78f3fbf3122ba522e526 377 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 6.0E-165 T 11-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 VSVS12_00689 b7192902350f78f3fbf3122ba522e526 377 Gene3D G3DSA:3.40.50.10350 2 361 5.3E-144 T 11-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold VSVS12_00264 8cd981068a2c5f4524895f228d676eb6 88 Pfam PF07369 Protein of unknown function (DUF1488) 5 85 1.7E-25 T 11-10-2018 IPR009962 Protein of unknown function DUF1488 VSVS12_00264 8cd981068a2c5f4524895f228d676eb6 88 Gene3D G3DSA:3.30.160.140 1 88 1.9E-34 T 11-10-2018 IPR036692 Shew3726-like superfamily VSVS12_00264 8cd981068a2c5f4524895f228d676eb6 88 SUPERFAMILY SSF160272 1 86 6.28E-32 T 11-10-2018 IPR036692 Shew3726-like superfamily VSVS12_00899 4311a5007ff8dae9cad6a74f5c35e0f1 85 Gene3D G3DSA:2.30.170.50 1 84 4.2E-24 T 11-10-2018 VSVS12_00899 4311a5007ff8dae9cad6a74f5c35e0f1 85 SUPERFAMILY SSF143800 1 81 1.73E-23 T 11-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 VSVS12_00899 4311a5007ff8dae9cad6a74f5c35e0f1 85 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 80 7.9E-19 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00899 4311a5007ff8dae9cad6a74f5c35e0f1 85 Pfam PF01197 Ribosomal protein L31 1 79 1.4E-27 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00899 4311a5007ff8dae9cad6a74f5c35e0f1 85 PRINTS PR01249 Ribosomal protein L31 signature 2 19 6.4E-17 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00899 4311a5007ff8dae9cad6a74f5c35e0f1 85 PRINTS PR01249 Ribosomal protein L31 signature 60 78 6.4E-17 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00899 4311a5007ff8dae9cad6a74f5c35e0f1 85 PRINTS PR01249 Ribosomal protein L31 signature 45 60 6.4E-17 T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00899 4311a5007ff8dae9cad6a74f5c35e0f1 85 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 81 27.248 T 11-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_00899 4311a5007ff8dae9cad6a74f5c35e0f1 85 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 11-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 VSVS12_01080 359ef49906957aa587ae188104cc1bcc 167 Pfam PF11993 Ribosomal S4P (gammaproteobacterial) 3 163 1.5E-57 T 11-10-2018 IPR021879 Ribosomal S4P (gammaproteobacterial) VSVS12_01761 abc030bb36d3b26662322aa0125f6a19 584 Pfam PF05359 Domain of Unknown Function (DUF748) 449 566 1.0E-17 T 11-10-2018 IPR008023 Protein of unknown function DUF748 VSVS12_01761 abc030bb36d3b26662322aa0125f6a19 584 Pfam PF05359 Domain of Unknown Function (DUF748) 210 356 1.1E-13 T 11-10-2018 IPR008023 Protein of unknown function DUF748 VSVS12_01471 ea7b166204a98f6dafe26bd572ce4aad 310 Pfam PF07859 alpha/beta hydrolase fold 83 288 7.8E-53 T 11-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 VSVS12_01471 ea7b166204a98f6dafe26bd572ce4aad 310 Gene3D G3DSA:3.40.50.1820 5 310 7.1E-67 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold VSVS12_01471 ea7b166204a98f6dafe26bd572ce4aad 310 SUPERFAMILY SSF53474 62 310 1.69E-55 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold VSVS12_03151 d5411d5602599a905ef272094f2b5d73 525 Pfam PF09992 Phosphodiester glycosidase 317 523 1.1E-23 T 11-10-2018 IPR018711 Phosphodiester glycosidase VSVS12_02160 fe303a09d2989e8ebffefceeb7d626a3 79 TIGRFAM TIGR02647 DNA: TIGR02647 family protein 1 76 5.2E-37 T 11-10-2018 IPR013468 Conserved hypothetical protein CHP02647 VSVS12_02160 fe303a09d2989e8ebffefceeb7d626a3 79 Pfam PF06146 Phosphate-starvation-inducible E 9 66 3.0E-9 T 11-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like VSVS12_04492 517dd623925840ea85e909c86f03dc78 187 SUPERFAMILY SSF53041 4 138 1.44E-34 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 VSVS12_04492 517dd623925840ea85e909c86f03dc78 187 Gene3D G3DSA:3.40.50.1390 4 127 3.1E-35 T 11-10-2018 VSVS12_04492 517dd623925840ea85e909c86f03dc78 187 Gene3D G3DSA:1.10.10.60 139 181 3.3E-7 T 11-10-2018 VSVS12_04492 517dd623925840ea85e909c86f03dc78 187 SMART SM00857 5 139 2.9E-36 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VSVS12_04492 517dd623925840ea85e909c86f03dc78 187 Pfam PF00239 Resolvase, N terminal domain 7 138 2.4E-33 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VSVS12_04492 517dd623925840ea85e909c86f03dc78 187 ProSitePatterns PS00397 Site-specific recombinases active site. 8 16 - T 11-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 VSVS12_02244 e9f6d680f83f641555b3888ccdc742e5 218 Pfam PF03379 CcmB protein 1 215 9.6E-89 T 11-10-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 VSVS12_02244 e9f6d680f83f641555b3888ccdc742e5 218 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 74 97 1.9E-68 T 11-10-2018 VSVS12_02244 e9f6d680f83f641555b3888ccdc742e5 218 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 99 117 1.9E-68 T 11-10-2018 VSVS12_02244 e9f6d680f83f641555b3888ccdc742e5 218 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 51 68 1.9E-68 T 11-10-2018 VSVS12_02244 e9f6d680f83f641555b3888ccdc742e5 218 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 154 173 1.9E-68 T 11-10-2018 VSVS12_02244 e9f6d680f83f641555b3888ccdc742e5 218 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 25 46 1.9E-68 T 11-10-2018 VSVS12_02244 e9f6d680f83f641555b3888ccdc742e5 218 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 191 214 1.9E-68 T 11-10-2018 VSVS12_02244 e9f6d680f83f641555b3888ccdc742e5 218 PIRSF PIRSF002764 1 218 2.9E-81 T 11-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria VSVS12_02244 e9f6d680f83f641555b3888ccdc742e5 218 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 4 214 2.5E-90 T 11-10-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria VSVS12_01887 f4b9f637390bf65ea849bfe3102dd985 215 Gene3D G3DSA:3.40.50.10990 21 192 1.3E-63 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VSVS12_01887 f4b9f637390bf65ea849bfe3102dd985 215 SUPERFAMILY SSF142695 26 190 3.27E-54 T 11-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VSVS12_01887 f4b9f637390bf65ea849bfe3102dd985 215 Pfam PF00925 GTP cyclohydrolase II 36 188 1.2E-58 T 11-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VSVS12_01887 f4b9f637390bf65ea849bfe3102dd985 215 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 7 215 37.521 T 11-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 VSVS12_03949 ed5cbd1ce5a8319d09bf70cbf9c87e12 808 SUPERFAMILY SSF49464 641 681 3.14E-7 T 11-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily VSVS12_04321 82fa2b69be384adfb116faf02e767b8e 401 Pfam PF07670 Nucleoside recognition 93 188 8.6E-7 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VSVS12_04321 82fa2b69be384adfb116faf02e767b8e 401 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 6 79 5.2E-19 T 11-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 VSVS12_04321 82fa2b69be384adfb116faf02e767b8e 401 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 195 400 1.3E-64 T 11-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 VSVS12_02620 e314d088b8f84712dffb01355a5d5314 206 Pfam PF03458 UPF0126 domain 95 166 5.6E-19 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 VSVS12_02620 e314d088b8f84712dffb01355a5d5314 206 Pfam PF03458 UPF0126 domain 8 81 7.0E-22 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 VSVS12_00439 2432e13fb497fafb08239c81ba25a9c0 191 PIRSF PIRSF016481 1 184 2.5E-30 T 11-10-2018 IPR007446 Pilus assembly protein PilP VSVS12_00439 2432e13fb497fafb08239c81ba25a9c0 191 Pfam PF04351 Pilus assembly protein, PilP 60 180 6.3E-29 T 11-10-2018 IPR007446 Pilus assembly protein PilP VSVS12_00439 2432e13fb497fafb08239c81ba25a9c0 191 Gene3D G3DSA:2.30.30.830 89 181 5.8E-21 T 11-10-2018 VSVS12_02047 a810466c2b4633a27a27a58dc1287dd3 77 Pfam PF06667 Phage shock protein B 4 74 1.7E-34 T 11-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 VSVS12_02047 a810466c2b4633a27a27a58dc1287dd3 77 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 75 7.2E-35 T 11-10-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 VSVS12_02840 58999e5c7b6e7566da90b3c0b463cb21 358 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 356 4.5E-107 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VSVS12_02840 58999e5c7b6e7566da90b3c0b463cb21 358 PIRSF PIRSF001359 13 358 2.6E-92 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VSVS12_02840 58999e5c7b6e7566da90b3c0b463cb21 358 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 357 3.1E-173 T 11-10-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 VSVS12_02840 58999e5c7b6e7566da90b3c0b463cb21 358 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 354 9.8E-87 T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VSVS12_02840 58999e5c7b6e7566da90b3c0b463cb21 358 Gene3D G3DSA:3.20.20.70 2 358 2.4E-143 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_02840 58999e5c7b6e7566da90b3c0b463cb21 358 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 100 111 - T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VSVS12_02840 58999e5c7b6e7566da90b3c0b463cb21 358 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 171 182 - T 11-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 VSVS12_02840 58999e5c7b6e7566da90b3c0b463cb21 358 SUPERFAMILY SSF51569 4 356 1.65E-126 T 11-10-2018 VSVS12_03367 df4f2ac85fa9ce1d21fd729c92890687 194 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 51 187 1.5E-44 T 11-10-2018 IPR005247 YbhB/YbcL VSVS12_03367 df4f2ac85fa9ce1d21fd729c92890687 194 SUPERFAMILY SSF49777 32 188 4.45E-50 T 11-10-2018 IPR036610 PEBP-like superfamily VSVS12_03367 df4f2ac85fa9ce1d21fd729c92890687 194 Gene3D G3DSA:3.90.280.10 20 191 8.1E-55 T 11-10-2018 IPR036610 PEBP-like superfamily VSVS12_03367 df4f2ac85fa9ce1d21fd729c92890687 194 Pfam PF01161 Phosphatidylethanolamine-binding protein 58 188 4.2E-34 T 11-10-2018 IPR008914 Phosphatidylethanolamine-binding protein VSVS12_02399 fa8a10f76cbce4e703a4a40d9962c289 113 Pfam PF12286 Protein of unknown function (DUF3622) 1 71 4.5E-34 T 11-10-2018 IPR022069 Protein of unknown function DUF3622 VSVS12_00572 3d23d4f92ed9ff74759755474f75661b 143 Gene3D G3DSA:2.60.40.3340 16 143 3.1E-39 T 11-10-2018 VSVS12_00572 3d23d4f92ed9ff74759755474f75661b 143 Pfam PF14467 Domain of unknown function (DUF4426) 24 142 6.7E-47 T 11-10-2018 IPR025218 Domain of unknown function DUF4426 VSVS12_01119 37640a31f0d6ba2f368cecc8631ec6f6 87 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 85 18.806 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 VSVS12_01119 37640a31f0d6ba2f368cecc8631ec6f6 87 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 84 4.6E-34 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 VSVS12_01119 37640a31f0d6ba2f368cecc8631ec6f6 87 Gene3D G3DSA:3.30.1070.10 1 84 1.0E-25 T 11-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 VSVS12_01119 37640a31f0d6ba2f368cecc8631ec6f6 87 Pfam PF03776 Septum formation topological specificity factor MinE 14 83 5.6E-23 T 11-10-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 VSVS12_01119 37640a31f0d6ba2f368cecc8631ec6f6 87 SUPERFAMILY SSF55229 34 86 1.31E-16 T 11-10-2018 IPR036707 Cell division topological specificity factor MinE superfamily GO:0032955|GO:0051301 VSVS12_03796 01769dbce5e6d9f2ca17342fcc93787d 217 Pfam PF01227 GTP cyclohydrolase I 38 215 5.5E-63 T 11-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 VSVS12_03796 01769dbce5e6d9f2ca17342fcc93787d 217 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 96 112 - T 11-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 VSVS12_03796 01769dbce5e6d9f2ca17342fcc93787d 217 Gene3D G3DSA:1.10.286.10 1 84 1.8E-36 T 11-10-2018 VSVS12_03796 01769dbce5e6d9f2ca17342fcc93787d 217 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 38 216 9.5E-80 T 11-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 VSVS12_03796 01769dbce5e6d9f2ca17342fcc93787d 217 Gene3D G3DSA:3.30.1130.10 85 217 1.5E-51 T 11-10-2018 VSVS12_03796 01769dbce5e6d9f2ca17342fcc93787d 217 SUPERFAMILY SSF55620 9 216 3.19E-73 T 11-10-2018 VSVS12_03796 01769dbce5e6d9f2ca17342fcc93787d 217 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 144 154 - T 11-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 VSVS12_03796 01769dbce5e6d9f2ca17342fcc93787d 217 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 34 217 33.572 T 11-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 VSVS12_02883 b707f697d07cc8db3a5f4291d6797ea4 253 Pfam PF04338 Protein of unknown function, DUF481 38 253 8.1E-51 T 11-10-2018 IPR007433 Protein of unknown function DUF481 VSVS12_01801 aa7ed7b0f04b21c27b02cc96a9f89c1d 134 Gene3D G3DSA:3.30.420.270 61 129 3.0E-11 T 11-10-2018 VSVS12_01801 aa7ed7b0f04b21c27b02cc96a9f89c1d 134 Pfam PF02472 Biopolymer transport protein ExbD/TolR 8 133 1.6E-29 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 VSVS12_00950 badf17be1fb91d98c51f3a1d35119495 263 Pfam PF01925 Sulfite exporter TauE/SafE 22 261 4.5E-37 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VSVS12_02972 7562b6bcd1583a8372266308a7e9f707 575 Pfam PF00474 Sodium:solute symporter family 376 491 6.7E-16 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VSVS12_02972 7562b6bcd1583a8372266308a7e9f707 575 Pfam PF00474 Sodium:solute symporter family 33 296 1.9E-37 T 11-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 VSVS12_02972 7562b6bcd1583a8372266308a7e9f707 575 Gene3D G3DSA:1.20.1730.10 348 555 5.8E-27 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily VSVS12_02972 7562b6bcd1583a8372266308a7e9f707 575 Gene3D G3DSA:1.20.1730.10 22 327 9.9E-36 T 11-10-2018 IPR038377 Sodium/glucose symporter superfamily VSVS12_02972 7562b6bcd1583a8372266308a7e9f707 575 TIGRFAM TIGR03648 Na_symport_lg: probable sodium:solute symporter, VC_2705 subfamily 7 566 1.7E-256 T 11-10-2018 IPR019899 Sodium/solute symporter, VC2705 subfamily VSVS12_02090 5dd8f68b85a194e716d9bb6ba7ebce37 259 Pfam PF01925 Sulfite exporter TauE/SafE 12 250 1.3E-46 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VSVS12_03179 211d296ac7df08590d7e707b06fd7f7e 188 Gene3D G3DSA:2.40.128.640 79 188 4.7E-36 T 11-10-2018 VSVS12_03179 211d296ac7df08590d7e707b06fd7f7e 188 Pfam PF04170 NlpE N-terminal domain 92 176 8.7E-28 T 11-10-2018 IPR007298 Copper resistance lipoprotein NlpE VSVS12_04420 184e0663c9a0dfa51caea98809911ee6 71 Gene3D G3DSA:1.10.10.2690 1 68 2.3E-6 T 11-10-2018 VSVS12_03502 c11cfb6b0b0952191240f49732b0d3b1 178 Gene3D G3DSA:1.25.40.10 78 178 1.7E-32 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_03502 c11cfb6b0b0952191240f49732b0d3b1 178 Gene3D G3DSA:1.20.58.320 1 77 2.1E-25 T 11-10-2018 VSVS12_03502 c11cfb6b0b0952191240f49732b0d3b1 178 Pfam PF06041 Bacterial protein of unknown function (DUF924) 5 175 5.6E-63 T 11-10-2018 IPR010323 Protein of unknown function DUF924 VSVS12_03502 c11cfb6b0b0952191240f49732b0d3b1 178 SUPERFAMILY SSF48452 2 174 9.48E-67 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_02287 7c4d806751af07547a811bc240484dfe 207 Pfam PF03458 UPF0126 domain 92 163 1.5E-19 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 VSVS12_02287 7c4d806751af07547a811bc240484dfe 207 Pfam PF03458 UPF0126 domain 5 78 1.2E-19 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 VSVS12_00727 2ee17997572373d5fc0a0d1939584dac 277 Gene3D G3DSA:3.20.20.20 2 277 9.7E-112 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VSVS12_00727 2ee17997572373d5fc0a0d1939584dac 277 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 52 65 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VSVS12_00727 2ee17997572373d5fc0a0d1939584dac 277 SUPERFAMILY SSF51717 5 275 2.88E-104 T 11-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VSVS12_00727 2ee17997572373d5fc0a0d1939584dac 277 Pfam PF00809 Pterin binding enzyme 19 258 2.4E-88 T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VSVS12_00727 2ee17997572373d5fc0a0d1939584dac 277 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 18 272 3.9E-100 T 11-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 VSVS12_00727 2ee17997572373d5fc0a0d1939584dac 277 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 18 33 - T 11-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 VSVS12_01054 6a98b149a167dc0bc35b9a3acd351054 348 Hamap MF_00462 Ion-translocating oxidoreductase complex subunit D [rsxD]. 3 348 26.903 T 11-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 VSVS12_01054 6a98b149a167dc0bc35b9a3acd351054 348 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 348 8.7E-140 T 11-10-2018 IPR011303 Ion-translocating oxidoreductase complex Rnf, subunit D GO:0016021|GO:0022900 VSVS12_01054 6a98b149a167dc0bc35b9a3acd351054 348 Pfam PF03116 NQR2, RnfD, RnfE family 6 347 6.6E-104 T 11-10-2018 IPR004338 Ion-translocating oxidoreductase NqrB/RnfD GO:0016020|GO:0055085 VSVS12_02841 d611951b3813b0e70613f1216b009f11 386 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 1.2E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02841 d611951b3813b0e70613f1216b009f11 386 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 1.2E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02841 d611951b3813b0e70613f1216b009f11 386 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 1.2E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02841 d611951b3813b0e70613f1216b009f11 386 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 1.2E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02841 d611951b3813b0e70613f1216b009f11 386 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 1.2E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02841 d611951b3813b0e70613f1216b009f11 386 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 1.2E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02841 d611951b3813b0e70613f1216b009f11 386 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 1.2E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02841 d611951b3813b0e70613f1216b009f11 386 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 1.2E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02841 d611951b3813b0e70613f1216b009f11 386 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 1.2E-82 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02841 d611951b3813b0e70613f1216b009f11 386 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 38.192 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02841 d611951b3813b0e70613f1216b009f11 386 SUPERFAMILY SSF53748 3 383 1.07E-143 T 11-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02841 d611951b3813b0e70613f1216b009f11 386 PIRSF PIRSF000724 1 386 1.9E-132 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02841 d611951b3813b0e70613f1216b009f11 386 Gene3D G3DSA:3.40.50.1260 165 373 1.3E-149 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02841 d611951b3813b0e70613f1216b009f11 386 Pfam PF00162 Phosphoglycerate kinase 6 373 4.9E-138 T 11-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02841 d611951b3813b0e70613f1216b009f11 386 Gene3D G3DSA:3.40.50.1260 10 379 1.3E-149 T 11-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_02841 d611951b3813b0e70613f1216b009f11 386 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 11-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 VSVS12_01884 4030bb922ce024eaaaf20192dde5eeb1 345 Gene3D G3DSA:1.20.1420.20 30 345 1.6E-64 T 11-10-2018 IPR038352 Imelysin-like domain superfamily VSVS12_01884 4030bb922ce024eaaaf20192dde5eeb1 345 Pfam PF09375 Imelysin 47 323 1.3E-37 T 11-10-2018 IPR018976 Imelysin-like domain VSVS12_02424 36ab62c2689ca33834b02be182fef960 147 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 10 134 4.0E-28 T 11-10-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 VSVS12_02424 36ab62c2689ca33834b02be182fef960 147 Gene3D G3DSA:3.30.530.20 1 143 4.2E-36 T 11-10-2018 IPR023393 START-like domain superfamily VSVS12_02424 36ab62c2689ca33834b02be182fef960 147 SUPERFAMILY SSF55961 1 142 4.28E-32 T 11-10-2018 VSVS12_00680 01ee8daa3e88fbc9b112fce0f947a154 161 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 2.5E-37 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VSVS12_00680 01ee8daa3e88fbc9b112fce0f947a154 161 Gene3D G3DSA:3.30.70.560 1 159 3.5E-59 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VSVS12_00680 01ee8daa3e88fbc9b112fce0f947a154 161 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 3.0E-46 T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VSVS12_00680 01ee8daa3e88fbc9b112fce0f947a154 161 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 11-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VSVS12_00680 01ee8daa3e88fbc9b112fce0f947a154 161 SUPERFAMILY SSF55083 1 159 1.7E-54 T 11-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 VSVS12_01595 c9695aeb4324d99f48844c30634b6993 157 SMART SM00448 4 125 3.5E-11 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_01595 c9695aeb4324d99f48844c30634b6993 157 Pfam PF00072 Response regulator receiver domain 6 126 5.5E-15 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_01595 c9695aeb4324d99f48844c30634b6993 157 Gene3D G3DSA:3.40.50.2300 1 134 2.4E-20 T 11-10-2018 VSVS12_01595 c9695aeb4324d99f48844c30634b6993 157 SUPERFAMILY SSF52172 1 131 3.56E-21 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_00014 3e519f63a7c2b16e378eb80f299f4f27 224 Gene3D G3DSA:3.40.50.300 1 223 2.7E-62 T 11-10-2018 VSVS12_00014 3e519f63a7c2b16e378eb80f299f4f27 224 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 11-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 VSVS12_00014 3e519f63a7c2b16e378eb80f299f4f27 224 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 214 6.3E-91 T 11-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 VSVS12_00014 3e519f63a7c2b16e378eb80f299f4f27 224 SUPERFAMILY SSF52540 1 220 7.98E-65 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00014 3e519f63a7c2b16e378eb80f299f4f27 224 Pfam PF00005 ABC transporter 18 165 3.0E-36 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_00014 3e519f63a7c2b16e378eb80f299f4f27 224 SMART SM00382 27 215 1.4E-9 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_02218 bf6650aceed87fe50a474508759b80ca 98 Pfam PF03692 Putative zinc- or iron-chelating domain 20 73 9.7E-7 T 11-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein VSVS12_00975 81997acd1a296c7e7cbdce0c9455540f 235 Pfam PF13861 FlgD Tudor-like domain 93 229 6.1E-14 T 11-10-2018 IPR025963 FlgD Tudor-like domain VSVS12_00975 81997acd1a296c7e7cbdce0c9455540f 235 Pfam PF13860 FlgD Ig-like domain 119 184 8.5E-20 T 11-10-2018 IPR025965 FlgD Ig-like domain VSVS12_00975 81997acd1a296c7e7cbdce0c9455540f 235 Pfam PF03963 Flagellar hook capping protein - N-terminal region 22 84 6.0E-21 T 11-10-2018 IPR005648 Flagellar hook capping protein VSVS12_00975 81997acd1a296c7e7cbdce0c9455540f 235 Gene3D G3DSA:2.30.30.910 94 222 3.8E-36 T 11-10-2018 VSVS12_00975 81997acd1a296c7e7cbdce0c9455540f 235 Gene3D G3DSA:2.60.40.4070 110 196 3.8E-36 T 11-10-2018 VSVS12_02787 81e780f50f1d2a438d8a4bae5cf66e01 198 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 2 194 3.0E-73 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 VSVS12_02787 81e780f50f1d2a438d8a4bae5cf66e01 198 SMART SM01207 10 185 3.1E-83 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 VSVS12_02787 81e780f50f1d2a438d8a4bae5cf66e01 198 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 18.665 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 VSVS12_02787 81e780f50f1d2a438d8a4bae5cf66e01 198 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 184 1.0E-49 T 11-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 VSVS12_01301 8b732afde714260b7e9ab0ccec42a260 143 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 33 137 9.5E-42 T 11-10-2018 IPR039366 YscW/ExsB VSVS12_00753 984554cd9c3756af3c20314f0b99ee0c 274 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 5 262 1.0E-90 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 VSVS12_00753 984554cd9c3756af3c20314f0b99ee0c 274 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 262 20.142 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 VSVS12_00753 984554cd9c3756af3c20314f0b99ee0c 274 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 VSVS12_00753 984554cd9c3756af3c20314f0b99ee0c 274 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 257 8.1E-84 T 11-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 VSVS12_00691 fd4d423a05862cb121ae89493a9dc67e 383 Gene3D G3DSA:1.10.10.2840 256 382 1.1E-19 T 11-10-2018 VSVS12_00691 fd4d423a05862cb121ae89493a9dc67e 383 Pfam PF05651 Putative sugar diacid recognition 3 136 8.5E-52 T 11-10-2018 IPR008599 Putative sugar diacid recognition VSVS12_00691 fd4d423a05862cb121ae89493a9dc67e 383 Pfam PF13556 PucR C-terminal helix-turn-helix domain 322 380 2.6E-21 T 11-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain VSVS12_02046 c9e955944f1307f5f80cd144829eb3fe 128 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 3 128 7.6E-47 T 11-10-2018 IPR014320 Phage shock protein, PspC VSVS12_02046 c9e955944f1307f5f80cd144829eb3fe 128 Pfam PF04024 PspC domain 3 61 6.8E-16 T 11-10-2018 IPR007168 Phage shock protein, PspC, N-terminal VSVS12_01100 e2d09efc3e4d3e843d5a62d1c5aaa045 221 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 13 135 5.0E-58 T 11-10-2018 IPR013559 YheO-like VSVS12_01100 e2d09efc3e4d3e843d5a62d1c5aaa045 221 Pfam PF08348 YheO-like PAS domain 17 123 2.5E-33 T 11-10-2018 IPR013559 YheO-like VSVS12_01100 e2d09efc3e4d3e843d5a62d1c5aaa045 221 Pfam PF13309 HTH domain 163 217 8.9E-12 T 11-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain VSVS12_01880 9d4d58d547ed4828364a68f805c33275 218 SUPERFAMILY SSF56281 5 211 7.21E-54 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VSVS12_01880 9d4d58d547ed4828364a68f805c33275 218 SMART SM00849 14 195 2.1E-37 T 11-10-2018 IPR001279 Metallo-beta-lactamase VSVS12_01880 9d4d58d547ed4828364a68f805c33275 218 Pfam PF00753 Metallo-beta-lactamase superfamily 14 195 1.1E-29 T 11-10-2018 IPR001279 Metallo-beta-lactamase VSVS12_01880 9d4d58d547ed4828364a68f805c33275 218 Gene3D G3DSA:3.60.15.10 3 213 7.5E-76 T 11-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like VSVS12_03468 a65b7db2ed32555b501307f8bcbe7446 443 Pfam PF00860 Permease family 23 395 8.8E-68 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 VSVS12_03117 b291ce2701ff955e143e04fefd9ebb60 248 Gene3D G3DSA:3.20.20.140 3 247 3.8E-62 T 11-10-2018 VSVS12_03117 b291ce2701ff955e143e04fefd9ebb60 248 SMART SM00481 5 79 2.3E-8 T 11-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal VSVS12_03117 b291ce2701ff955e143e04fefd9ebb60 248 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 2 245 52.807 T 11-10-2018 IPR023710 Probable phosphatase YcdX GO:0008270 VSVS12_03117 b291ce2701ff955e143e04fefd9ebb60 248 SUPERFAMILY SSF89550 4 243 7.06E-62 T 11-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 VSVS12_01866 03a2e1ab116514a5c60742aadd6464d6 158 Pfam PF00210 Ferritin-like domain 20 158 5.8E-26 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 VSVS12_01866 03a2e1ab116514a5c60742aadd6464d6 158 ProSitePatterns PS00819 Dps protein family signature 2. 66 80 - T 11-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 VSVS12_01866 03a2e1ab116514a5c60742aadd6464d6 158 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 40 56 1.1E-13 T 11-10-2018 IPR002177 DNA-binding protein Dps VSVS12_01866 03a2e1ab116514a5c60742aadd6464d6 158 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 64 80 1.1E-13 T 11-10-2018 IPR002177 DNA-binding protein Dps VSVS12_01866 03a2e1ab116514a5c60742aadd6464d6 158 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 135 153 1.1E-13 T 11-10-2018 IPR002177 DNA-binding protein Dps VSVS12_01866 03a2e1ab116514a5c60742aadd6464d6 158 SUPERFAMILY SSF47240 5 158 5.55E-43 T 11-10-2018 IPR009078 Ferritin-like superfamily VSVS12_01866 03a2e1ab116514a5c60742aadd6464d6 158 Gene3D G3DSA:1.20.1260.10 2 158 1.8E-53 T 11-10-2018 IPR012347 Ferritin-like VSVS12_01866 03a2e1ab116514a5c60742aadd6464d6 158 ProSitePatterns PS00818 Dps protein family signature 1. 40 56 - T 11-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 VSVS12_01866 03a2e1ab116514a5c60742aadd6464d6 158 PIRSF PIRSF005900 1 158 5.9E-45 T 11-10-2018 IPR002177 DNA-binding protein Dps VSVS12_03061 859c8326868c35c3e690a5b7b1f56b79 208 Pfam PF08241 Methyltransferase domain 42 136 1.1E-22 T 11-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 VSVS12_03061 859c8326868c35c3e690a5b7b1f56b79 208 SUPERFAMILY SSF53335 2 189 2.11E-32 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_03061 859c8326868c35c3e690a5b7b1f56b79 208 Gene3D G3DSA:3.40.50.150 2 203 4.1E-33 T 11-10-2018 VSVS12_04451 d727637324f4b08122268a9cc048682e 96 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 52 69 1.4E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VSVS12_04451 d727637324f4b08122268a9cc048682e 96 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 69 89 1.4E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VSVS12_04451 d727637324f4b08122268a9cc048682e 96 SUPERFAMILY SSF46689 17 88 7.62E-9 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_04451 d727637324f4b08122268a9cc048682e 96 Pfam PF02954 Bacterial regulatory protein, Fis family 54 77 5.2E-7 T 11-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 VSVS12_04451 d727637324f4b08122268a9cc048682e 96 Gene3D G3DSA:1.10.10.60 16 88 4.2E-10 T 11-10-2018 VSVS12_03210 7ccd143cf5e9fe7f7ac176433ca3010f 365 Pfam PF04245 37-kD nucleoid-associated bacterial protein 9 352 3.4E-54 T 11-10-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 VSVS12_01676 256fa328bc2a3ea848419b4df5e73f78 57 Pfam PF04957 Ribosome modulation factor 1 54 1.7E-28 T 11-10-2018 IPR007040 Ribosome modulation factor VSVS12_01676 256fa328bc2a3ea848419b4df5e73f78 57 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 52 1.0E-21 T 11-10-2018 IPR007040 Ribosome modulation factor VSVS12_01676 256fa328bc2a3ea848419b4df5e73f78 57 Gene3D G3DSA:1.10.10.620 1 57 4.4E-29 T 11-10-2018 IPR023200 Ribosome modulation factor domain superfamily VSVS12_01676 256fa328bc2a3ea848419b4df5e73f78 57 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 30.073 T 11-10-2018 IPR007040 Ribosome modulation factor VSVS12_02543 065b7c1fdec7d01f2916e8b175f5e1ea 183 Gene3D G3DSA:1.20.120.520 1 151 2.1E-14 T 11-10-2018 VSVS12_02543 065b7c1fdec7d01f2916e8b175f5e1ea 183 Pfam PF01814 Hemerythrin HHE cation binding domain 2 135 2.8E-13 T 11-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 VSVS12_02692 74d5bb803ca51b044b6ea8588fbf8d06 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 95 2.6E-26 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VSVS12_02692 74d5bb803ca51b044b6ea8588fbf8d06 101 Gene3D G3DSA:3.40.50.2300 2 101 4.6E-38 T 11-10-2018 VSVS12_02692 74d5bb803ca51b044b6ea8588fbf8d06 101 SUPERFAMILY SSF52794 1 101 2.04E-36 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VSVS12_00921 2cb21fa31c4df68fafe2bf6bfd9da7f8 156 Pfam PF07295 Zinc-ribbon containing domain 15 153 5.1E-50 T 11-10-2018 IPR009912 Zinc-ribbon containing domain VSVS12_03402 9b88789c125f6069ae0c1b4e4a8c6bdd 432 SMART SM00900 102 181 2.2E-9 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 VSVS12_03402 9b88789c125f6069ae0c1b4e4a8c6bdd 432 Pfam PF04205 FMN-binding domain 102 178 1.1E-10 T 11-10-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 VSVS12_03402 9b88789c125f6069ae0c1b4e4a8c6bdd 432 Pfam PF12801 4Fe-4S binding domain 271 308 2.5E-7 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VSVS12_03402 9b88789c125f6069ae0c1b4e4a8c6bdd 432 Pfam PF12801 4Fe-4S binding domain 318 337 610.0 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VSVS12_03402 9b88789c125f6069ae0c1b4e4a8c6bdd 432 Pfam PF12801 4Fe-4S binding domain 359 392 1.3E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VSVS12_03656 f61ea31273010c151a87a1065cba612c 1171 SUPERFAMILY SSF141072 2 63 7.06E-5 T 11-10-2018 IPR038081 CalX-like domain superfamily VSVS12_03656 f61ea31273010c151a87a1065cba612c 1171 SUPERFAMILY SSF141072 815 918 3.79E-5 T 11-10-2018 IPR038081 CalX-like domain superfamily VSVS12_04360 72ebb95af69058e2c9a280024f872881 305 SUPERFAMILY SSF141523 91 228 1.7E-30 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like VSVS12_04360 72ebb95af69058e2c9a280024f872881 305 Pfam PF01476 LysM domain 38 81 3.0E-7 T 11-10-2018 IPR018392 LysM domain VSVS12_04360 72ebb95af69058e2c9a280024f872881 305 Pfam PF03734 L,D-transpeptidase catalytic domain 94 228 9.7E-23 T 11-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 VSVS12_04360 72ebb95af69058e2c9a280024f872881 305 SMART SM00257 37 81 8.1E-6 T 11-10-2018 IPR018392 LysM domain VSVS12_04360 72ebb95af69058e2c9a280024f872881 305 Gene3D G3DSA:2.40.440.10 18 296 8.7E-84 T 11-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like VSVS12_04360 72ebb95af69058e2c9a280024f872881 305 SUPERFAMILY SSF54106 36 81 3.79E-6 T 11-10-2018 VSVS12_01280 2ec1a156a3ff7087e10e27a986bf71aa 204 Pfam PF03942 DTW domain 6 188 1.1E-45 T 11-10-2018 IPR005636 DTW VSVS12_01280 2ec1a156a3ff7087e10e27a986bf71aa 204 SMART SM01144 4 193 2.6E-67 T 11-10-2018 IPR005636 DTW VSVS12_02573 2327b699a1c879c0fe6c206a24c50369 196 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 34.239 T 11-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 VSVS12_02573 2327b699a1c879c0fe6c206a24c50369 196 Gene3D G3DSA:3.40.50.10490 1 195 7.3E-72 T 11-10-2018 VSVS12_02573 2327b699a1c879c0fe6c206a24c50369 196 Pfam PF13580 SIS domain 9 144 5.7E-33 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VSVS12_02573 2327b699a1c879c0fe6c206a24c50369 196 SUPERFAMILY SSF53697 1 191 2.43E-56 T 11-10-2018 VSVS12_02925 9f21a6f8a12e9f2d8b18ac9022b04ec2 288 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 9 285 48.705 T 11-10-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 VSVS12_02925 9f21a6f8a12e9f2d8b18ac9022b04ec2 288 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 48 283 5.9E-85 T 11-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 VSVS12_02925 9f21a6f8a12e9f2d8b18ac9022b04ec2 288 Pfam PF02666 Phosphatidylserine decarboxylase 62 280 1.7E-61 T 11-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 VSVS12_03448 4fc19df80c47cb6765bb1bee6fa607e7 536 Gene3D G3DSA:3.40.50.300 311 534 1.1E-32 T 11-10-2018 VSVS12_03448 4fc19df80c47cb6765bb1bee6fa607e7 536 Pfam PF00005 ABC transporter 364 487 3.3E-13 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_03448 4fc19df80c47cb6765bb1bee6fa607e7 536 SUPERFAMILY SSF52540 361 526 1.33E-28 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03448 4fc19df80c47cb6765bb1bee6fa607e7 536 SMART SM00382 38 224 5.1E-10 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_03448 4fc19df80c47cb6765bb1bee6fa607e7 536 SMART SM00382 370 534 1.3E-8 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_03448 4fc19df80c47cb6765bb1bee6fa607e7 536 SUPERFAMILY SSF52540 7 258 8.5E-37 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03448 4fc19df80c47cb6765bb1bee6fa607e7 536 Gene3D G3DSA:3.40.50.300 10 285 1.4E-45 T 11-10-2018 VSVS12_03448 4fc19df80c47cb6765bb1bee6fa607e7 536 Pfam PF00005 ABC transporter 39 180 3.1E-18 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_00618 571640a540beba907528517b61813a59 614 SUPERFAMILY SSF56349 261 418 1.0E-5 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VSVS12_00148 f7409462b817671e139f8c78779fdfd0 175 Pfam PF00210 Ferritin-like domain 7 143 1.1E-40 T 11-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 VSVS12_00148 f7409462b817671e139f8c78779fdfd0 175 Gene3D G3DSA:1.20.1260.10 1 175 9.3E-54 T 11-10-2018 IPR012347 Ferritin-like VSVS12_00148 f7409462b817671e139f8c78779fdfd0 175 SUPERFAMILY SSF47240 1 159 3.45E-58 T 11-10-2018 IPR009078 Ferritin-like superfamily VSVS12_01485 7f9c7a4c2547dff6495a20eaf4a4153f 415 Pfam PF03773 Predicted permease 11 357 5.5E-48 T 11-10-2018 IPR005524 Predicted permease DUF318 VSVS12_02164 99bccfb151d9c04d305f54f3424c39f8 213 Gene3D G3DSA:3.40.50.620 19 154 1.5E-27 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VSVS12_02164 99bccfb151d9c04d305f54f3424c39f8 213 Pfam PF02698 DUF218 domain 28 154 1.2E-24 T 11-10-2018 IPR003848 Domain of unknown function DUF218 VSVS12_00870 21986dad20728c325a5e1d409a594511 280 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 238 264 - T 11-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 VSVS12_00870 21986dad20728c325a5e1d409a594511 280 Pfam PF01148 Cytidylyltransferase family 2 280 6.7E-68 T 11-10-2018 VSVS12_03514 c462f2dee1a9c41aed3bd08a24d8d88e 704 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 24 694 2.3E-206 T 11-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ VSVS12_03514 c462f2dee1a9c41aed3bd08a24d8d88e 704 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 122 614 4.5E-72 T 11-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit VSVS12_01236 91fd9085787d2421073370d884b86933 175 Pfam PF02620 Uncharacterized ACR, COG1399 62 174 1.6E-18 T 11-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD VSVS12_04597 3649f9473182b15a0ac35f9d3ab28e52 193 Pfam PF06054 Competence protein CoiA-like family 10 165 1.1E-17 T 11-10-2018 IPR010330 Competence-induced protein CoiA-like VSVS12_00554 66c3d12e884c77e0fa01519f75b120e2 347 Pfam PF00144 Beta-lactamase 51 324 3.2E-30 T 11-10-2018 IPR001466 Beta-lactamase-related VSVS12_00554 66c3d12e884c77e0fa01519f75b120e2 347 Gene3D G3DSA:3.40.710.10 20 338 9.6E-67 T 11-10-2018 VSVS12_00554 66c3d12e884c77e0fa01519f75b120e2 347 SUPERFAMILY SSF56601 28 336 4.65E-66 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VSVS12_01598 a43459755f435394daa281449777fcae 225 Pfam PF04172 LrgB-like family 6 218 3.9E-76 T 11-10-2018 IPR007300 CidB/LrgB family VSVS12_01598 a43459755f435394daa281449777fcae 225 TIGRFAM TIGR00659 TIGR00659: TIGR00659 family protein 2 218 2.7E-75 T 11-10-2018 IPR005261 Conserved hypothetical protein CHP00659 VSVS12_01854 242f1fa109f1c2f1f5a6cde16953d673 395 Gene3D G3DSA:1.20.1250.20 1 195 3.0E-17 T 11-10-2018 VSVS12_01854 242f1fa109f1c2f1f5a6cde16953d673 395 Gene3D G3DSA:1.20.1250.20 203 389 7.8E-22 T 11-10-2018 VSVS12_01854 242f1fa109f1c2f1f5a6cde16953d673 395 Pfam PF07690 Major Facilitator Superfamily 210 386 4.8E-17 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VSVS12_01854 242f1fa109f1c2f1f5a6cde16953d673 395 SUPERFAMILY SSF103473 5 381 6.02E-48 T 11-10-2018 IPR036259 MFS transporter superfamily VSVS12_04550 fad402262b1a6cd4940c9df246e01f8a 491 Pfam PF03611 PTS system sugar-specific permease component 15 415 3.4E-123 T 11-10-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 VSVS12_00368 dcffea45309973d137b372c90bcf9273 388 Gene3D G3DSA:3.90.1150.10 249 385 2.2E-50 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VSVS12_00368 dcffea45309973d137b372c90bcf9273 388 PIRSF PIRSF001434 1 385 5.0E-128 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VSVS12_00368 dcffea45309973d137b372c90bcf9273 388 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 4 383 2.4E-200 T 11-10-2018 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|MetaCyc: PWY-801 VSVS12_00368 dcffea45309973d137b372c90bcf9273 388 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 191 205 - T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VSVS12_00368 dcffea45309973d137b372c90bcf9273 388 SUPERFAMILY SSF53383 9 382 2.81E-114 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VSVS12_00368 dcffea45309973d137b372c90bcf9273 388 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 381 2.6E-132 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VSVS12_00368 dcffea45309973d137b372c90bcf9273 388 Gene3D G3DSA:3.40.640.10 3 248 1.2E-79 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VSVS12_00382 66f7d4117735fbccdd39b72f916d99c3 346 Gene3D G3DSA:3.40.50.2000 83 151 6.8E-6 T 11-10-2018 VSVS12_00382 66f7d4117735fbccdd39b72f916d99c3 346 SUPERFAMILY SSF53756 44 322 2.12E-7 T 11-10-2018 VSVS12_00382 66f7d4117735fbccdd39b72f916d99c3 346 Gene3D G3DSA:3.40.50.2000 152 225 6.8E-6 T 11-10-2018 VSVS12_04444 62935020d372764057f3439f84dd34ce 322 TIGRFAM TIGR03756 conj_TIGR03756: integrating conjugative element protein, PFL_4710 family 34 319 1.1E-76 T 11-10-2018 IPR026331 Integrating conjugative element protein PFL_4710 VSVS12_04444 62935020d372764057f3439f84dd34ce 322 Pfam PF06834 TraU protein 40 311 1.4E-38 T 11-10-2018 IPR009649 TraU VSVS12_00765 2c11c4233ec27e8a68232bec671a0f8d 495 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 328 437 2.7E-21 T 11-10-2018 IPR025299 CstA, C-terminal domain VSVS12_00765 2c11c4233ec27e8a68232bec671a0f8d 495 Pfam PF02554 Carbon starvation protein CstA 148 294 5.3E-19 T 11-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 VSVS12_00765 2c11c4233ec27e8a68232bec671a0f8d 495 Pfam PF02554 Carbon starvation protein CstA 6 144 4.1E-33 T 11-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 VSVS12_03350 c43438230f72b906a761a15fd6e37046 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 278 5.3E-27 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VSVS12_03350 c43438230f72b906a761a15fd6e37046 299 SUPERFAMILY SSF161098 99 281 8.63E-38 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_03350 c43438230f72b906a761a15fd6e37046 299 Gene3D G3DSA:1.10.3720.10 96 288 3.8E-33 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_03081 d960f245dbf0b4d0363bb06fbc43396f 281 Gene3D G3DSA:3.40.50.1820 64 275 1.7E-29 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold VSVS12_03081 d960f245dbf0b4d0363bb06fbc43396f 281 SUPERFAMILY SSF53474 33 266 3.49E-33 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold VSVS12_03081 d960f245dbf0b4d0363bb06fbc43396f 281 Pfam PF12146 Serine aminopeptidase, S33 83 183 1.8E-12 T 11-10-2018 IPR022742 Serine aminopeptidase, S33 VSVS12_02574 00fac9de9e466d262f489525b5445a0e 189 Pfam PF04972 BON domain 45 112 6.4E-11 T 11-10-2018 IPR007055 BON domain VSVS12_02574 00fac9de9e466d262f489525b5445a0e 189 Pfam PF04972 BON domain 122 187 1.6E-17 T 11-10-2018 IPR007055 BON domain VSVS12_02574 00fac9de9e466d262f489525b5445a0e 189 SMART SM00749 127 189 7.0E-5 T 11-10-2018 IPR014004 Transport-associated and nodulation domain, bacteria VSVS12_00983 3af357cc9d0fabbe9561fee870fae6dd 397 Pfam PF00700 Bacterial flagellin C-terminal helical region 320 397 1.6E-6 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VSVS12_00983 3af357cc9d0fabbe9561fee870fae6dd 397 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 142 8.9E-10 T 11-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 VSVS12_00983 3af357cc9d0fabbe9561fee870fae6dd 397 Gene3D G3DSA:1.20.1330.10 267 373 9.2E-8 T 11-10-2018 VSVS12_00983 3af357cc9d0fabbe9561fee870fae6dd 397 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 4 397 3.0E-95 T 11-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 VSVS12_00983 3af357cc9d0fabbe9561fee870fae6dd 397 SUPERFAMILY SSF64518 1 397 4.58E-64 T 11-10-2018 VSVS12_00983 3af357cc9d0fabbe9561fee870fae6dd 397 Gene3D G3DSA:1.20.1330.10 42 229 5.1E-33 T 11-10-2018 VSVS12_03107 a01676cc3a3527540619616ee2667a00 324 Pfam PF13407 Periplasmic binding protein domain 28 283 1.7E-52 T 11-10-2018 IPR025997 Periplasmic binding protein VSVS12_03107 a01676cc3a3527540619616ee2667a00 324 Gene3D G3DSA:3.40.50.2300 23 292 3.4E-92 T 11-10-2018 VSVS12_03107 a01676cc3a3527540619616ee2667a00 324 Gene3D G3DSA:3.40.50.2300 128 263 3.4E-92 T 11-10-2018 VSVS12_03107 a01676cc3a3527540619616ee2667a00 324 SUPERFAMILY SSF53822 23 322 1.03E-65 T 11-10-2018 IPR028082 Periplasmic binding protein-like I VSVS12_03960 fed260fcbdc4a4d053e40f6a0684f314 510 Pfam PF03606 C4-dicarboxylate anaerobic carrier 20 505 2.9E-135 T 11-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 VSVS12_04214 425bfa3a04f92672a3931be44efbdace 115 Pfam PF11225 Protein of unknown function (DUF3024) 58 115 7.7E-17 T 11-10-2018 IPR021388 Bacteriophage 933W, L0084 VSVS12_02889 f7dc9142cd347722e914c1abe1e03783 62 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 52 1.0E-12 T 11-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain VSVS12_02889 f7dc9142cd347722e914c1abe1e03783 62 Gene3D G3DSA:1.10.10.1100 1 58 3.4E-20 T 11-10-2018 VSVS12_00195 6562434c305bdd0da1dff388527d049c 257 Gene3D G3DSA:3.40.50.300 1 255 1.5E-78 T 11-10-2018 VSVS12_00195 6562434c305bdd0da1dff388527d049c 257 PIRSF PIRSF009320 88 251 6.3E-9 T 11-10-2018 VSVS12_00195 6562434c305bdd0da1dff388527d049c 257 PIRSF PIRSF009320 2 85 1.7E-13 T 11-10-2018 VSVS12_00195 6562434c305bdd0da1dff388527d049c 257 Pfam PF13614 AAA domain 2 178 5.4E-63 T 11-10-2018 IPR025669 AAA domain VSVS12_00195 6562434c305bdd0da1dff388527d049c 257 SUPERFAMILY SSF52540 2 253 2.6E-67 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_02214 a1f628b5283e86a8560c1c5ae71b8485 627 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 50 501 2.2E-147 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VSVS12_02214 a1f628b5283e86a8560c1c5ae71b8485 627 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 13 502 8.0E-161 T 11-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 VSVS12_02214 a1f628b5283e86a8560c1c5ae71b8485 627 ProSitePatterns PS01303 BCCT family of transporters signature. 321 330 - T 11-10-2018 IPR018093 BCCT transporter, conserved site VSVS12_02415 1b60b9470c9d291c1e5a4f87e5fb94af 115 Gene3D G3DSA:1.20.1440.60 1 115 7.7E-32 T 11-10-2018 IPR036583 23S rRNA-intervening sequence superfamily VSVS12_02415 1b60b9470c9d291c1e5a4f87e5fb94af 115 SUPERFAMILY SSF158446 1 111 1.44E-32 T 11-10-2018 IPR036583 23S rRNA-intervening sequence superfamily VSVS12_02415 1b60b9470c9d291c1e5a4f87e5fb94af 115 TIGRFAM TIGR02436 TIGR02436: four helix bundle protein 8 110 1.1E-29 T 11-10-2018 IPR012657 23S rRNA-intervening sequence protein VSVS12_02415 1b60b9470c9d291c1e5a4f87e5fb94af 115 Pfam PF05635 23S rRNA-intervening sequence protein 4 105 6.0E-29 T 11-10-2018 IPR012657 23S rRNA-intervening sequence protein VSVS12_01885 161ab5e2669b2e6937d86a7acbfdb220 464 Pfam PF06537 Di-haem oxidoreductase, putative peroxidase 25 464 1.3E-141 T 11-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase VSVS12_01885 161ab5e2669b2e6937d86a7acbfdb220 464 PIRSF PIRSF028099 7 464 1.2E-184 T 11-10-2018 IPR010538 Di-haem oxidoreductase, putative peroxidase VSVS12_01885 161ab5e2669b2e6937d86a7acbfdb220 464 Gene3D G3DSA:1.10.760.10 322 463 1.4E-6 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VSVS12_01885 161ab5e2669b2e6937d86a7acbfdb220 464 SUPERFAMILY SSF46626 327 464 2.06E-22 T 11-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 VSVS12_01879 c9997b9bb2320976715fac4e8854e1e0 246 Pfam PF11201 Protein of unknown function (DUF2982) 73 222 5.9E-61 T 11-10-2018 IPR021367 Protein of unknown function DUF2982 VSVS12_01890 2a00fac242d80c37515d7dd99eeaf3fa 195 Pfam PF13023 HD domain 15 177 2.7E-53 T 11-10-2018 IPR006674 HD domain VSVS12_01890 2a00fac242d80c37515d7dd99eeaf3fa 195 SUPERFAMILY SSF109604 4 184 7.85E-44 T 11-10-2018 VSVS12_01890 2a00fac242d80c37515d7dd99eeaf3fa 195 Gene3D G3DSA:1.10.3210.10 1 195 2.1E-54 T 11-10-2018 VSVS12_02734 810c2f7b0f894b7c3281fd48f214f40d 103 Pfam PF10734 Protein of unknown function (DUF2523) 34 93 2.5E-6 T 11-10-2018 IPR019670 Protein of unkown function DUF2523 VSVS12_04370 48da9bb5ee83aa5eb8b8cdb7a3aada0e 182 Hamap MF_01572 UPF0397 protein . 1 182 20.761 T 11-10-2018 IPR022914 Protein of unknown function UPF0397 VSVS12_04370 48da9bb5ee83aa5eb8b8cdb7a3aada0e 182 Pfam PF07155 ECF-type riboflavin transporter, S component 3 171 1.6E-42 T 11-10-2018 IPR009825 ECF transporter, substrate-specific component-like GO:0016020 VSVS12_04370 48da9bb5ee83aa5eb8b8cdb7a3aada0e 182 Gene3D G3DSA:1.10.1760.20 1 176 2.6E-16 T 11-10-2018 VSVS12_01680 db0f22377a2599365db24b9ede51ec9c 102 Pfam PF12321 Protein of unknown function (DUF3634) 2 101 1.1E-37 T 11-10-2018 IPR022090 Protein of unknown function DUF3634 VSVS12_03304 2a8771db5ea118fb59222c0ffeb014c2 350 Gene3D G3DSA:3.40.50.10470 145 335 4.4E-73 T 11-10-2018 VSVS12_03304 2a8771db5ea118fb59222c0ffeb014c2 350 SUPERFAMILY SSF100950 9 341 3.68E-77 T 11-10-2018 IPR037171 NagB/RpiA transferase-like VSVS12_03304 2a8771db5ea118fb59222c0ffeb014c2 350 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 42 334 8.5E-57 T 11-10-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 VSVS12_03304 2a8771db5ea118fb59222c0ffeb014c2 350 Gene3D G3DSA:1.20.120.420 47 144 4.4E-73 T 11-10-2018 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 VSVS12_03304 2a8771db5ea118fb59222c0ffeb014c2 350 Pfam PF01008 Initiation factor 2 subunit family 65 335 1.8E-44 T 11-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 VSVS12_01154 47101c8074938dd238b70686ff993034 346 SUPERFAMILY SSF48208 29 344 2.55E-53 T 11-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 VSVS12_01154 47101c8074938dd238b70686ff993034 346 Pfam PF07470 Glycosyl Hydrolase Family 88 30 342 9.4E-74 T 11-10-2018 IPR010905 Glycosyl hydrolase, family 88 VSVS12_01154 47101c8074938dd238b70686ff993034 346 Gene3D G3DSA:1.50.10.10 2 345 2.4E-106 T 11-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 VSVS12_03321 b38bde83be060d26712373ce9d52f0dd 65 Pfam PF04400 (Na+)-NQR maturation NqrM 21 62 2.7E-20 T 11-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM VSVS12_02487 b628a346a5a4c6ca97bcac26d7f69ba2 618 Pfam PF07549 SecD/SecF GG Motif 116 141 3.9E-7 T 11-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site VSVS12_02487 b628a346a5a4c6ca97bcac26d7f69ba2 618 PRINTS PR00702 Acriflavin resistance protein family signature 581 604 4.8E-5 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_02487 b628a346a5a4c6ca97bcac26d7f69ba2 618 PRINTS PR00702 Acriflavin resistance protein family signature 452 475 4.8E-5 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_02487 b628a346a5a4c6ca97bcac26d7f69ba2 618 PRINTS PR00702 Acriflavin resistance protein family signature 506 530 4.8E-5 T 11-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 VSVS12_02487 b628a346a5a4c6ca97bcac26d7f69ba2 618 Gene3D G3DSA:3.30.1360.200 281 434 3.0E-50 T 11-10-2018 VSVS12_02487 b628a346a5a4c6ca97bcac26d7f69ba2 618 Pfam PF13721 SecD export protein N-terminal TM region 2 103 1.1E-37 T 11-10-2018 IPR027398 SecD export protein N-terminal TM domain VSVS12_02487 b628a346a5a4c6ca97bcac26d7f69ba2 618 Gene3D G3DSA:3.30.70.260 51 105 3.1E-5 T 11-10-2018 VSVS12_02487 b628a346a5a4c6ca97bcac26d7f69ba2 618 Gene3D G3DSA:3.30.70.3400 222 440 3.0E-50 T 11-10-2018 VSVS12_02487 b628a346a5a4c6ca97bcac26d7f69ba2 618 SUPERFAMILY SSF82866 413 609 9.94E-44 T 11-10-2018 VSVS12_02487 b628a346a5a4c6ca97bcac26d7f69ba2 618 Pfam PF02355 Protein export membrane protein 436 597 7.9E-18 T 11-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial VSVS12_02487 b628a346a5a4c6ca97bcac26d7f69ba2 618 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 348 597 7.3E-82 T 11-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial VSVS12_02487 b628a346a5a4c6ca97bcac26d7f69ba2 618 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 603 1.3E-149 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 VSVS12_02487 b628a346a5a4c6ca97bcac26d7f69ba2 618 Gene3D G3DSA:1.20.1640.10 451 601 6.0E-7 T 11-10-2018 VSVS12_02487 b628a346a5a4c6ca97bcac26d7f69ba2 618 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 618 47.524 T 11-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 VSVS12_02055 75d799c155eef579d82ef4fa5fdff80b 301 SMART SM01131 178 300 3.7E-31 T 11-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VSVS12_02055 75d799c155eef579d82ef4fa5fdff80b 301 Gene3D G3DSA:3.90.1640.10 1 186 4.5E-63 T 11-10-2018 VSVS12_02055 75d799c155eef579d82ef4fa5fdff80b 301 Pfam PF02833 DHHA2 domain 180 297 6.1E-14 T 11-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VSVS12_02055 75d799c155eef579d82ef4fa5fdff80b 301 SUPERFAMILY SSF64182 1 298 3.4E-64 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily VSVS12_02055 75d799c155eef579d82ef4fa5fdff80b 301 Gene3D G3DSA:3.10.310.20 187 300 1.5E-21 T 11-10-2018 IPR038222 DHHA2 domain superfamily KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VSVS12_02055 75d799c155eef579d82ef4fa5fdff80b 301 Pfam PF01368 DHH family 2 142 4.0E-22 T 11-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 VSVS12_00374 f50c80006d150811eb0b13834b64dcf5 170 Pfam PF05036 Sporulation related domain 96 165 4.7E-14 T 11-10-2018 IPR007730 Sporulation-like domain GO:0042834 VSVS12_00374 f50c80006d150811eb0b13834b64dcf5 170 SUPERFAMILY SSF110997 95 166 1.96E-16 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VSVS12_00374 f50c80006d150811eb0b13834b64dcf5 170 Gene3D G3DSA:3.30.70.1070 90 168 9.6E-27 T 11-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 VSVS12_00612 50c28aa709d5f3e93a6f23b874c4b00d 272 SUPERFAMILY SSF56317 3 263 9.29E-79 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VSVS12_00612 50c28aa709d5f3e93a6f23b874c4b00d 272 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 149 169 - T 11-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site VSVS12_00612 50c28aa709d5f3e93a6f23b874c4b00d 272 Gene3D G3DSA:3.60.110.10 1 269 3.6E-87 T 11-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily VSVS12_00612 50c28aa709d5f3e93a6f23b874c4b00d 272 Pfam PF00795 Carbon-nitrogen hydrolase 3 255 3.6E-49 T 11-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 VSVS12_01004 9b7f7100af7a13967b5158c386257342 314 SMART SM01400 4 121 1.3E-76 T 11-10-2018 VSVS12_01004 9b7f7100af7a13967b5158c386257342 314 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 1.8E-125 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 VSVS12_01004 9b7f7100af7a13967b5158c386257342 314 Gene3D G3DSA:3.40.50.2020 7 302 1.7E-135 T 11-10-2018 VSVS12_01004 9b7f7100af7a13967b5158c386257342 314 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 313 1.8E-31 T 11-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 VSVS12_01004 9b7f7100af7a13967b5158c386257342 314 SUPERFAMILY SSF53271 69 306 1.51E-67 T 11-10-2018 IPR029057 Phosphoribosyltransferase-like VSVS12_01004 9b7f7100af7a13967b5158c386257342 314 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 11-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 VSVS12_01004 9b7f7100af7a13967b5158c386257342 314 Gene3D G3DSA:3.40.50.2020 148 290 1.7E-135 T 11-10-2018 VSVS12_01004 9b7f7100af7a13967b5158c386257342 314 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 6.5E-50 T 11-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 VSVS12_01004 9b7f7100af7a13967b5158c386257342 314 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 4 314 49.78 T 11-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 VSVS12_01502 d9619d0406abae637c4b6fb9d8ff0247 605 SUPERFAMILY SSF52540 1 390 1.64E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01502 d9619d0406abae637c4b6fb9d8ff0247 605 Pfam PF13175 AAA ATPase domain 1 387 1.9E-44 T 11-10-2018 VSVS12_03942 07ee73bf8dae460d108f47767b43be0c 439 SMART SM00448 146 263 2.7E-34 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_03942 07ee73bf8dae460d108f47767b43be0c 439 SMART SM00448 318 435 2.9E-35 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_03942 07ee73bf8dae460d108f47767b43be0c 439 Gene3D G3DSA:3.40.50.2300 125 266 6.8E-41 T 11-10-2018 VSVS12_03942 07ee73bf8dae460d108f47767b43be0c 439 Pfam PF00072 Response regulator receiver domain 320 436 9.3E-25 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_03942 07ee73bf8dae460d108f47767b43be0c 439 Pfam PF00072 Response regulator receiver domain 148 263 1.8E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_03942 07ee73bf8dae460d108f47767b43be0c 439 SUPERFAMILY SSF52172 145 268 8.25E-35 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_03942 07ee73bf8dae460d108f47767b43be0c 439 Gene3D G3DSA:3.40.50.2300 376 439 1.3E-22 T 11-10-2018 VSVS12_03942 07ee73bf8dae460d108f47767b43be0c 439 Gene3D G3DSA:3.40.50.12330 310 374 7.0E-21 T 11-10-2018 VSVS12_03942 07ee73bf8dae460d108f47767b43be0c 439 SUPERFAMILY SSF52172 318 438 7.54E-37 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_03493 21262ff79db4a535023b84a103fe076e 367 Pfam PF00990 Diguanylate cyclase, GGDEF domain 295 355 1.3E-15 T 11-10-2018 IPR000160 GGDEF domain VSVS12_03493 21262ff79db4a535023b84a103fe076e 367 Pfam PF03924 CHASE domain 109 221 4.3E-14 T 11-10-2018 IPR006189 CHASE domain VSVS12_03493 21262ff79db4a535023b84a103fe076e 367 SMART SM01079 47 223 2.5E-31 T 11-10-2018 IPR006189 CHASE domain VSVS12_03493 21262ff79db4a535023b84a103fe076e 367 SUPERFAMILY SSF55073 299 355 3.92E-13 T 11-10-2018 IPR029787 Nucleotide cyclase VSVS12_03493 21262ff79db4a535023b84a103fe076e 367 Gene3D G3DSA:3.30.70.270 282 357 1.2E-17 T 11-10-2018 VSVS12_03493 21262ff79db4a535023b84a103fe076e 367 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 292 355 4.1E-17 T 11-10-2018 IPR000160 GGDEF domain VSVS12_01964 7eb598579511f6957fdcd2b494827d41 243 Pfam PF12525 Protein of unknown function (DUF3726) 3 78 2.4E-25 T 11-10-2018 IPR022201 Protein of unknown function DUF3726 VSVS12_01382 6a8e6cd4de1738c79938773591a07998 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 241 6.2E-19 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VSVS12_01382 6a8e6cd4de1738c79938773591a07998 246 Gene3D G3DSA:1.10.3720.10 3 243 5.0E-48 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_01382 6a8e6cd4de1738c79938773591a07998 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 73 9.9E-15 T 11-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 VSVS12_01382 6a8e6cd4de1738c79938773591a07998 246 SUPERFAMILY SSF161098 11 233 3.66E-38 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_01462 67eb37ae54afdb173d00e98a497489ab 338 Gene3D G3DSA:3.80.10.10 10 128 1.3E-25 T 11-10-2018 IPR032675 Leucine-rich repeat domain superfamily VSVS12_01462 67eb37ae54afdb173d00e98a497489ab 338 SUPERFAMILY SSF52058 164 312 1.11E-6 T 11-10-2018 VSVS12_01462 67eb37ae54afdb173d00e98a497489ab 338 Pfam PF13306 Leucine rich repeats (6 copies) 228 326 3.4E-22 T 11-10-2018 IPR026906 Leucine rich repeat 5 VSVS12_01462 67eb37ae54afdb173d00e98a497489ab 338 Pfam PF13306 Leucine rich repeats (6 copies) 33 151 4.4E-27 T 11-10-2018 IPR026906 Leucine rich repeat 5 VSVS12_01462 67eb37ae54afdb173d00e98a497489ab 338 Gene3D G3DSA:3.80.10.10 129 331 1.9E-52 T 11-10-2018 IPR032675 Leucine-rich repeat domain superfamily VSVS12_02229 38172d727191513f5709c3eeeb2cd8fc 182 Pfam PF00881 Nitroreductase family 8 161 1.9E-23 T 11-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 VSVS12_02229 38172d727191513f5709c3eeeb2cd8fc 182 SUPERFAMILY SSF55469 1 180 4.71E-42 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VSVS12_02229 38172d727191513f5709c3eeeb2cd8fc 182 Gene3D G3DSA:3.40.109.10 1 181 1.0E-41 T 11-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 VSVS12_02229 38172d727191513f5709c3eeeb2cd8fc 182 PIRSF PIRSF000232 1 182 4.8E-62 T 11-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like VSVS12_03872 0b54e4264361f67c93828b52c4f176e6 123 Pfam PF10719 Late competence development protein ComFB 8 83 3.5E-13 T 11-10-2018 IPR019657 Late competence development protein ComFB VSVS12_01848 780dcde530bce13d4eb1242d51e0ffdc 400 SUPERFAMILY SSF103473 13 398 5.1E-65 T 11-10-2018 IPR036259 MFS transporter superfamily VSVS12_01848 780dcde530bce13d4eb1242d51e0ffdc 400 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 14 394 1.6E-117 T 11-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 VSVS12_01848 780dcde530bce13d4eb1242d51e0ffdc 400 Gene3D G3DSA:1.20.1720.10 17 395 6.1E-103 T 11-10-2018 VSVS12_01848 780dcde530bce13d4eb1242d51e0ffdc 400 Pfam PF07690 Major Facilitator Superfamily 24 364 5.5E-49 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VSVS12_00017 7413395369b5ef3d4f18797b8c2741cd 88 Pfam PF06611 Protein of unknown function (DUF1145) 3 59 2.3E-17 T 11-10-2018 IPR009525 Protein of unknown function DUF1145 VSVS12_02132 1e28988c8380cf604d79af3a6640ebaa 202 Pfam PF13489 Methyltransferase domain 36 144 1.6E-8 T 11-10-2018 VSVS12_02132 1e28988c8380cf604d79af3a6640ebaa 202 Gene3D G3DSA:3.40.50.150 1 201 3.4E-21 T 11-10-2018 VSVS12_02132 1e28988c8380cf604d79af3a6640ebaa 202 SUPERFAMILY SSF53335 7 190 1.84E-19 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_01698 2a1bbf1a9bd2dd3fdf678d540a96e7c3 256 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 250 2.3E-18 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VSVS12_01698 2a1bbf1a9bd2dd3fdf678d540a96e7c3 256 SUPERFAMILY SSF161098 4 254 4.02E-54 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_01698 2a1bbf1a9bd2dd3fdf678d540a96e7c3 256 Gene3D G3DSA:1.10.3720.10 4 256 5.3E-47 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_03386 962003f547ef6ef7e807e1b187df0818 274 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 5 209 3.9E-15 T 11-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 VSVS12_03386 962003f547ef6ef7e807e1b187df0818 274 Gene3D G3DSA:3.40.720.10 2 270 5.5E-31 T 11-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 VSVS12_03386 962003f547ef6ef7e807e1b187df0818 274 SUPERFAMILY SSF53649 1 259 9.65E-47 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VSVS12_01166 ae1793365c8846854c990bbf17315a96 147 Pfam PF05154 TM2 domain 68 111 9.4E-14 T 11-10-2018 IPR007829 TM2 domain VSVS12_03264 fbb0ef657cc10fd83d16c4570b391603 125 Pfam PF13316 Protein of unknown function (DUF4087) 19 116 8.7E-28 T 11-10-2018 IPR025145 Protein of unknown function DUF4087 VSVS12_00069 171505d928a4cf5c2dec2587b895ee8a 111 Pfam PF12305 Protein of unknown function (DUF3630) 7 100 5.3E-37 T 11-10-2018 IPR022080 Protein of unknown function DUF3630 VSVS12_03716 43327aaff945880b311594e1a29c07c1 193 Pfam PF11140 Protein of unknown function (DUF2913) 8 181 1.1E-21 T 11-10-2018 IPR021316 Protein of unknown function DUF2913 VSVS12_03131 5cba0ae6a68a514146147c059b39df50 424 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 36 420 5.4E-219 T 11-10-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 VSVS12_03131 5cba0ae6a68a514146147c059b39df50 424 Pfam PF04303 PrpF protein 36 418 4.3E-172 T 11-10-2018 IPR007400 PrpF protein VSVS12_03131 5cba0ae6a68a514146147c059b39df50 424 SUPERFAMILY SSF54506 215 420 6.04E-74 T 11-10-2018 VSVS12_03131 5cba0ae6a68a514146147c059b39df50 424 Gene3D G3DSA:3.10.310.10 41 415 2.1E-147 T 11-10-2018 VSVS12_03131 5cba0ae6a68a514146147c059b39df50 424 SUPERFAMILY SSF54506 34 212 1.18E-70 T 11-10-2018 VSVS12_03131 5cba0ae6a68a514146147c059b39df50 424 Gene3D G3DSA:3.10.310.10 211 401 2.1E-147 T 11-10-2018 VSVS12_03629 0414558ea92f103c7a93b9a119d0659c 466 Hamap MF_01128 H(+)/Cl(-) exchange transporter ClcA [clcA]. 1 466 49.189 T 11-10-2018 IPR023861 Chloride channel, ClcA GO:0005887|GO:0006821|GO:0015108 VSVS12_03629 0414558ea92f103c7a93b9a119d0659c 466 SUPERFAMILY SSF81340 27 451 1.01E-114 T 11-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 VSVS12_03629 0414558ea92f103c7a93b9a119d0659c 466 PRINTS PR00762 Chloride channel signature 100 117 1.4E-30 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 VSVS12_03629 0414558ea92f103c7a93b9a119d0659c 466 PRINTS PR00762 Chloride channel signature 350 370 1.4E-30 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 VSVS12_03629 0414558ea92f103c7a93b9a119d0659c 466 PRINTS PR00762 Chloride channel signature 385 401 1.4E-30 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 VSVS12_03629 0414558ea92f103c7a93b9a119d0659c 466 PRINTS PR00762 Chloride channel signature 181 200 1.4E-30 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 VSVS12_03629 0414558ea92f103c7a93b9a119d0659c 466 PRINTS PR00762 Chloride channel signature 403 422 1.4E-30 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 VSVS12_03629 0414558ea92f103c7a93b9a119d0659c 466 Pfam PF00654 Voltage gated chloride channel 88 435 4.9E-95 T 11-10-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 VSVS12_03629 0414558ea92f103c7a93b9a119d0659c 466 Gene3D G3DSA:1.10.3080.10 29 465 5.9E-146 T 11-10-2018 IPR014743 Chloride channel, core Reactome: R-HSA-2672351 VSVS12_03046 3b21379c47481caea85c9748cc82d33f 388 SMART SM00671 135 170 0.029 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_03046 3b21379c47481caea85c9748cc82d33f 388 SMART SM00671 65 97 110.0 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_03046 3b21379c47481caea85c9748cc82d33f 388 SMART SM00671 171 206 180.0 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_03046 3b21379c47481caea85c9748cc82d33f 388 SMART SM00671 207 242 0.0062 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_03046 3b21379c47481caea85c9748cc82d33f 388 SUPERFAMILY SSF81901 74 282 1.92E-26 T 11-10-2018 VSVS12_03046 3b21379c47481caea85c9748cc82d33f 388 Gene3D G3DSA:1.25.40.10 51 186 1.1E-12 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_03046 3b21379c47481caea85c9748cc82d33f 388 Pfam PF08238 Sel1 repeat 137 168 0.018 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_03046 3b21379c47481caea85c9748cc82d33f 388 Pfam PF08238 Sel1 repeat 211 242 1.2E-5 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_03046 3b21379c47481caea85c9748cc82d33f 388 Pfam PF08238 Sel1 repeat 245 276 130.0 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_03046 3b21379c47481caea85c9748cc82d33f 388 Pfam PF08238 Sel1 repeat 79 97 0.0049 T 11-10-2018 IPR006597 Sel1-like repeat VSVS12_03046 3b21379c47481caea85c9748cc82d33f 388 Gene3D G3DSA:1.25.40.10 187 315 8.4E-19 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_02325 46978221ea36dfabb813e52fb6af25f8 179 Gene3D G3DSA:1.25.40.10 85 176 8.3E-26 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_02325 46978221ea36dfabb813e52fb6af25f8 179 SUPERFAMILY SSF48452 43 161 4.43E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_02325 46978221ea36dfabb813e52fb6af25f8 179 Gene3D G3DSA:1.25.40.10 26 84 2.2E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_00840 cb2d6f2937bb1f1665b4981c09eeb13a 453 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 17 38 5.6E-10 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VSVS12_00840 cb2d6f2937bb1f1665b4981c09eeb13a 453 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 46 65 5.6E-10 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VSVS12_00840 cb2d6f2937bb1f1665b4981c09eeb13a 453 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 313 332 5.6E-10 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VSVS12_00840 cb2d6f2937bb1f1665b4981c09eeb13a 453 SUPERFAMILY SSF161070 9 452 4.58E-117 T 11-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 VSVS12_00840 cb2d6f2937bb1f1665b4981c09eeb13a 453 Pfam PF00209 Sodium:neurotransmitter symporter family 9 128 3.5E-21 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VSVS12_00840 cb2d6f2937bb1f1665b4981c09eeb13a 453 Pfam PF00209 Sodium:neurotransmitter symporter family 153 451 3.1E-25 T 11-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 VSVS12_04426 a0e41b86e41e9eb8d77566de59c2b176 134 Pfam PF11072 Protein of unknown function (DUF2859) 29 131 1.4E-33 T 11-10-2018 IPR021300 Integrating conjugative element protein, PFL4695 VSVS12_04426 a0e41b86e41e9eb8d77566de59c2b176 134 TIGRFAM TIGR03765 ICE_PFL_4695: integrating conjugative element protein, PFL_4695 family 32 134 1.0E-31 T 11-10-2018 IPR021300 Integrating conjugative element protein, PFL4695 VSVS12_02508 86dbd7eafb6a7a8c49c40f2827c83f53 423 SUPERFAMILY SSF53300 148 411 6.89E-9 T 11-10-2018 IPR036465 von Willebrand factor A-like domain superfamily VSVS12_02508 86dbd7eafb6a7a8c49c40f2827c83f53 423 Pfam PF13400 Putative Flp pilus-assembly TadE/G-like 10 56 1.1E-6 T 11-10-2018 IPR028087 Putative Flp pilus-assembly TadG-like, N-terminal VSVS12_03093 88f01938e54c0b11b59ea394e8a56151 255 Gene3D G3DSA:3.40.50.1820 5 252 3.0E-47 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold VSVS12_03093 88f01938e54c0b11b59ea394e8a56151 255 SUPERFAMILY SSF53474 9 251 1.08E-48 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold VSVS12_03093 88f01938e54c0b11b59ea394e8a56151 255 Pfam PF00561 alpha/beta hydrolase fold 27 155 2.0E-18 T 11-10-2018 IPR000073 Alpha/beta hydrolase fold-1 VSVS12_01052 b4e10054d8a2c8697aba95eb28b0a9a8 229 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 200 1.8E-66 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VSVS12_01052 b4e10054d8a2c8697aba95eb28b0a9a8 229 Hamap MF_00478 Ion-translocating oxidoreductase complex subunit E [rsxE]. 1 210 28.386 T 11-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 VSVS12_01052 b4e10054d8a2c8697aba95eb28b0a9a8 229 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 6 209 2.6E-88 T 11-10-2018 IPR010968 Ion-translocating oxidoreductase complex subunit E GO:0016020|GO:0022900 VSVS12_01052 b4e10054d8a2c8697aba95eb28b0a9a8 229 PIRSF PIRSF006102 1 219 7.4E-80 T 11-10-2018 IPR003667 NqrDE/RnfAE GO:0016020 VSVS12_01160 13f425da389be8ed3becb57a3ac42651 309 Gene3D G3DSA:3.40.1190.20 2 305 2.5E-79 T 11-10-2018 IPR029056 Ribokinase-like VSVS12_01160 13f425da389be8ed3becb57a3ac42651 309 Pfam PF00294 pfkB family carbohydrate kinase 6 302 2.0E-60 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB VSVS12_01160 13f425da389be8ed3becb57a3ac42651 309 SUPERFAMILY SSF53613 5 302 8.73E-70 T 11-10-2018 IPR029056 Ribokinase-like VSVS12_01160 13f425da389be8ed3becb57a3ac42651 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 257 270 - T 11-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 VSVS12_00502 fb0d7b39cf514f72b65b7669b977ac2e 156 SUPERFAMILY SSF55729 1 151 3.84E-36 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_00502 fb0d7b39cf514f72b65b7669b977ac2e 156 Pfam PF13673 Acetyltransferase (GNAT) domain 46 149 4.7E-18 T 11-10-2018 IPR000182 GNAT domain VSVS12_00502 fb0d7b39cf514f72b65b7669b977ac2e 156 Gene3D G3DSA:3.40.630.30 1 149 1.9E-43 T 11-10-2018 VSVS12_01426 444c38450b5b6a705945b64c6b095fbe 223 Pfam PF13414 TPR repeat 63 98 3.4E-9 T 11-10-2018 VSVS12_01426 444c38450b5b6a705945b64c6b095fbe 223 Gene3D G3DSA:1.25.40.10 8 215 3.5E-22 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_01426 444c38450b5b6a705945b64c6b095fbe 223 SUPERFAMILY SSF48452 25 200 3.53E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_01518 22e38f8fed1c1dd6f2b22697b3709433 3185 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 2475 2558 3.6E-23 T 11-10-2018 IPR010221 VCBS repeat VSVS12_01518 22e38f8fed1c1dd6f2b22697b3709433 3185 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 795 892 1.6E-26 T 11-10-2018 IPR010221 VCBS repeat VSVS12_01518 22e38f8fed1c1dd6f2b22697b3709433 3185 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1635 1732 1.7E-26 T 11-10-2018 IPR010221 VCBS repeat VSVS12_01518 22e38f8fed1c1dd6f2b22697b3709433 3185 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 2055 2152 1.7E-26 T 11-10-2018 IPR010221 VCBS repeat VSVS12_01518 22e38f8fed1c1dd6f2b22697b3709433 3185 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 900 997 2.5E-26 T 11-10-2018 IPR010221 VCBS repeat VSVS12_01518 22e38f8fed1c1dd6f2b22697b3709433 3185 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 480 577 1.9E-26 T 11-10-2018 IPR010221 VCBS repeat VSVS12_01518 22e38f8fed1c1dd6f2b22697b3709433 3185 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1530 1627 2.8E-26 T 11-10-2018 IPR010221 VCBS repeat VSVS12_01518 22e38f8fed1c1dd6f2b22697b3709433 3185 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 375 472 1.1E-26 T 11-10-2018 IPR010221 VCBS repeat VSVS12_01518 22e38f8fed1c1dd6f2b22697b3709433 3185 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1845 1942 5.3E-26 T 11-10-2018 IPR010221 VCBS repeat VSVS12_01518 22e38f8fed1c1dd6f2b22697b3709433 3185 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 2265 2362 6.5E-26 T 11-10-2018 IPR010221 VCBS repeat VSVS12_01518 22e38f8fed1c1dd6f2b22697b3709433 3185 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1320 1417 2.4E-26 T 11-10-2018 IPR010221 VCBS repeat VSVS12_01518 22e38f8fed1c1dd6f2b22697b3709433 3185 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1950 2047 4.6E-26 T 11-10-2018 IPR010221 VCBS repeat VSVS12_01518 22e38f8fed1c1dd6f2b22697b3709433 3185 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1425 1522 3.4E-26 T 11-10-2018 IPR010221 VCBS repeat VSVS12_01518 22e38f8fed1c1dd6f2b22697b3709433 3185 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 2160 2257 3.9E-26 T 11-10-2018 IPR010221 VCBS repeat VSVS12_01518 22e38f8fed1c1dd6f2b22697b3709433 3185 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1740 1837 7.2E-27 T 11-10-2018 IPR010221 VCBS repeat VSVS12_01518 22e38f8fed1c1dd6f2b22697b3709433 3185 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 165 262 1.0E-24 T 11-10-2018 IPR010221 VCBS repeat VSVS12_01518 22e38f8fed1c1dd6f2b22697b3709433 3185 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 2370 2467 4.0E-26 T 11-10-2018 IPR010221 VCBS repeat VSVS12_01518 22e38f8fed1c1dd6f2b22697b3709433 3185 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1110 1207 1.4E-26 T 11-10-2018 IPR010221 VCBS repeat VSVS12_01518 22e38f8fed1c1dd6f2b22697b3709433 3185 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1215 1312 1.2E-26 T 11-10-2018 IPR010221 VCBS repeat VSVS12_01518 22e38f8fed1c1dd6f2b22697b3709433 3185 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 585 682 2.0E-26 T 11-10-2018 IPR010221 VCBS repeat VSVS12_01518 22e38f8fed1c1dd6f2b22697b3709433 3185 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 270 367 1.9E-26 T 11-10-2018 IPR010221 VCBS repeat VSVS12_01518 22e38f8fed1c1dd6f2b22697b3709433 3185 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 690 787 1.9E-25 T 11-10-2018 IPR010221 VCBS repeat VSVS12_01518 22e38f8fed1c1dd6f2b22697b3709433 3185 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 1005 1102 4.5E-26 T 11-10-2018 IPR010221 VCBS repeat VSVS12_01518 22e38f8fed1c1dd6f2b22697b3709433 3185 SUPERFAMILY SSF51120 3044 3146 2.09E-8 T 11-10-2018 IPR011049 Serralysin-like metalloprotease, C-terminal VSVS12_03767 f6c43423fc8be5bce83c59853e1e78b5 582 Gene3D G3DSA:3.40.50.2300 147 279 2.1E-5 T 11-10-2018 VSVS12_03767 f6c43423fc8be5bce83c59853e1e78b5 582 Pfam PF01966 HD domain 405 527 2.9E-16 T 11-10-2018 IPR006674 HD domain VSVS12_03767 f6c43423fc8be5bce83c59853e1e78b5 582 SMART SM00471 400 537 2.6E-7 T 11-10-2018 IPR003607 HD/PDEase domain VSVS12_03767 f6c43423fc8be5bce83c59853e1e78b5 582 Gene3D G3DSA:1.10.3210.10 380 581 1.3E-68 T 11-10-2018 VSVS12_03767 f6c43423fc8be5bce83c59853e1e78b5 582 Gene3D G3DSA:3.40.50.2300 148 269 2.1E-5 T 11-10-2018 VSVS12_03767 f6c43423fc8be5bce83c59853e1e78b5 582 SUPERFAMILY SSF109604 396 567 2.23E-35 T 11-10-2018 VSVS12_01527 b43ee8ad722a8fcf4e5543c807839a4c 434 Gene3D G3DSA:3.40.710.10 100 409 5.2E-84 T 11-10-2018 VSVS12_01527 b43ee8ad722a8fcf4e5543c807839a4c 434 Gene3D G3DSA:1.20.58.710 151 268 5.2E-84 T 11-10-2018 VSVS12_01527 b43ee8ad722a8fcf4e5543c807839a4c 434 Pfam PF00144 Beta-lactamase 106 411 1.4E-29 T 11-10-2018 IPR001466 Beta-lactamase-related VSVS12_01527 b43ee8ad722a8fcf4e5543c807839a4c 434 SUPERFAMILY SSF56601 36 427 6.83E-73 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VSVS12_03838 b91f6a6fbf283d0f4421aa08d0a0f822 76 Gene3D G3DSA:1.20.1280.290 2 75 8.9E-6 T 11-10-2018 VSVS12_03838 b91f6a6fbf283d0f4421aa08d0a0f822 76 ProDom PD058023 TRANSMEMBRANE SO1069 MEMBRANE VCA0743 SO4196 VVA0623 VPA0666 HI1736 PM0424 6 73 2.0E-29 T 11-10-2018 IPR020137 Uncharacterised protein family HI1736 VSVS12_03838 b91f6a6fbf283d0f4421aa08d0a0f822 76 Pfam PF10688 Bacterial inner membrane protein 6 73 7.2E-10 T 11-10-2018 IPR019629 Uncharacterised protein family HI1736/YgjV VSVS12_03540 2ed2cf6da3bc83b784be457f6568a6c1 336 SUPERFAMILY SSF103039 142 331 9.59E-38 T 11-10-2018 IPR028976 CheC-like superfamily VSVS12_03540 2ed2cf6da3bc83b784be457f6568a6c1 336 Pfam PF00072 Response regulator receiver domain 5 115 4.8E-22 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_03540 2ed2cf6da3bc83b784be457f6568a6c1 336 SUPERFAMILY SSF52172 3 136 5.83E-28 T 11-10-2018 IPR011006 CheY-like superfamily VSVS12_03540 2ed2cf6da3bc83b784be457f6568a6c1 336 SMART SM00448 3 115 4.3E-21 T 11-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 VSVS12_03540 2ed2cf6da3bc83b784be457f6568a6c1 336 Gene3D G3DSA:3.40.1550.10 139 330 6.1E-30 T 11-10-2018 IPR028976 CheC-like superfamily VSVS12_03540 2ed2cf6da3bc83b784be457f6568a6c1 336 Gene3D G3DSA:3.40.50.2300 3 127 5.9E-27 T 11-10-2018 VSVS12_00299 92854603061f167007d7820bf8da7897 253 Pfam PF01203 Type II secretion system (T2SS), protein N 37 248 1.4E-50 T 11-10-2018 IPR022792 Type II secretion system, protein N VSVS12_00299 92854603061f167007d7820bf8da7897 253 ProSitePatterns PS01142 Bacterial type II secretion system protein N signature. 45 67 - T 11-10-2018 IPR000645 Type II secretion system protein N, conserved site GO:0008565|GO:0015627|GO:0015628 VSVS12_02112 f2d004f7badefa7c7c4448902bd9bc86 183 Pfam PF10063 Uncharacterized integral membrane protein (DUF2301) 98 181 2.1E-9 T 11-10-2018 IPR019275 Protein of unknown function DUF2301 VSVS12_02397 9b50c77f5eb57a837062eacc46141f0d 69 Pfam PF06786 Uncharacterised protein family (UPF0253) 3 69 6.4E-34 T 11-10-2018 IPR009624 Uncharacterised protein family UPF0253 VSVS12_02397 9b50c77f5eb57a837062eacc46141f0d 69 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 9 67 2.0E-21 T 11-10-2018 IPR009624 Uncharacterised protein family UPF0253 VSVS12_02397 9b50c77f5eb57a837062eacc46141f0d 69 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 3 69 25.7 T 11-10-2018 IPR009624 Uncharacterised protein family UPF0253 VSVS12_01283 a51d433465276f5b9213c79836a50f07 404 Gene3D G3DSA:3.90.1150.10 21 398 8.2E-145 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VSVS12_01283 a51d433465276f5b9213c79836a50f07 404 Pfam PF00155 Aminotransferase class I and II 61 391 7.5E-47 T 11-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 VSVS12_01283 a51d433465276f5b9213c79836a50f07 404 SUPERFAMILY SSF53383 5 400 1.02E-93 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VSVS12_01283 a51d433465276f5b9213c79836a50f07 404 Gene3D G3DSA:3.40.640.10 53 294 8.2E-145 T 11-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 VSVS12_01096 4c330e4e6ffde7e9e7c0e98db8740b90 235 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 41 214 1.2E-24 T 11-10-2018 IPR005519 Acid phosphatase, class B-like VSVS12_01096 4c330e4e6ffde7e9e7c0e98db8740b90 235 TIGRFAM TIGR01672 AphA: HAD phosphatase, family IIIB 42 235 9.6E-68 T 11-10-2018 IPR010025 HAD-superfamily phosphatase, subfamily IIIB, AphA GO:0003993|GO:0030288 KEGG: 00730+3.1.3.2|KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 VSVS12_01096 4c330e4e6ffde7e9e7c0e98db8740b90 235 Gene3D G3DSA:3.40.50.1000 29 235 5.9E-68 T 11-10-2018 IPR023214 HAD superfamily VSVS12_01096 4c330e4e6ffde7e9e7c0e98db8740b90 235 SUPERFAMILY SSF56784 45 234 5.06E-48 T 11-10-2018 IPR036412 HAD-like superfamily VSVS12_02176 a39144424a8c0a4c8c4fead594c0f925 248 Pfam PF05618 Putative ATP-dependant zinc protease 110 246 1.4E-47 T 11-10-2018 VSVS12_02176 a39144424a8c0a4c8c4fead594c0f925 248 Gene3D G3DSA:2.40.70.10 108 237 1.5E-41 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily VSVS12_02176 a39144424a8c0a4c8c4fead594c0f925 248 SUPERFAMILY SSF50630 110 244 9.21E-42 T 11-10-2018 IPR021109 Aspartic peptidase domain superfamily VSVS12_02238 dc2c3d1da77e2dd60c951b1e665bf837 159 Pfam PF03918 Cytochrome C biogenesis protein 9 150 8.1E-54 T 11-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family VSVS12_02238 dc2c3d1da77e2dd60c951b1e665bf837 159 Gene3D G3DSA:1.10.8.640 20 105 2.4E-35 T 11-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily VSVS12_01710 406ba3919e37e57b897249a811f1aedb 236 Pfam PF11748 Protein of unknown function (DUF3306) 4 134 3.5E-22 T 11-10-2018 IPR021735 Protein of unknown function DUF3306 VSVS12_00783 5112f75b74110d39736d41b7b247a715 108 SUPERFAMILY SSF69754 1 103 1.07E-29 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like VSVS12_00783 5112f75b74110d39736d41b7b247a715 108 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 92 3.4E-22 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 VSVS12_00783 5112f75b74110d39736d41b7b247a715 108 Gene3D G3DSA:3.30.160.100 1 106 1.4E-32 T 11-10-2018 IPR036567 Ribosome hibernation promotion factor-like VSVS12_00783 5112f75b74110d39736d41b7b247a715 108 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 100 4.7E-30 T 11-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 VSVS12_01921 0dbafe797244d65357dcaa14f55dd225 260 Pfam PF02698 DUF218 domain 61 178 1.3E-18 T 11-10-2018 IPR003848 Domain of unknown function DUF218 VSVS12_03201 d13146b30d20f734b7aa34707a400ea7 557 Pfam PF12571 Phage tail-collar fibre protein 6 148 6.1E-15 T 11-10-2018 IPR022225 Phage tail fibre protein VSVS12_03201 d13146b30d20f734b7aa34707a400ea7 557 Pfam PF03406 Phage tail fibre repeat 184 215 2.4E-5 T 11-10-2018 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 VSVS12_01520 be98cc94aaf797c1bef12e3c1464cdf5 541 SMART SM00283 279 540 7.3E-64 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_01520 be98cc94aaf797c1bef12e3c1464cdf5 541 Gene3D G3DSA:1.10.287.950 209 541 4.8E-72 T 11-10-2018 VSVS12_01520 be98cc94aaf797c1bef12e3c1464cdf5 541 SMART SM00304 210 264 5.1E-4 T 11-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 VSVS12_01520 be98cc94aaf797c1bef12e3c1464cdf5 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 377 404 1.9E-21 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VSVS12_01520 be98cc94aaf797c1bef12e3c1464cdf5 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 300 329 1.9E-21 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VSVS12_01520 be98cc94aaf797c1bef12e3c1464cdf5 541 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 406 435 1.9E-21 T 11-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 VSVS12_01520 be98cc94aaf797c1bef12e3c1464cdf5 541 SUPERFAMILY SSF58104 231 541 1.01E-68 T 11-10-2018 VSVS12_01520 be98cc94aaf797c1bef12e3c1464cdf5 541 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 170 1.5E-14 T 11-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain VSVS12_01520 be98cc94aaf797c1bef12e3c1464cdf5 541 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 325 505 1.2E-39 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_03354 bcc07b51081e5a34c64cf148b92e2a01 438 PIRSF PIRSF006060 1 434 2.6E-57 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VSVS12_03354 bcc07b51081e5a34c64cf148b92e2a01 438 Gene3D G3DSA:1.20.1740.10 1 434 1.4E-64 T 11-10-2018 VSVS12_03354 bcc07b51081e5a34c64cf148b92e2a01 438 Hamap MF_02073 Putrescine transporter PotE [potE]. 5 433 31.555 T 11-10-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 VSVS12_03354 bcc07b51081e5a34c64cf148b92e2a01 438 Pfam PF13520 Amino acid permease 7 403 2.3E-45 T 11-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 VSVS12_04336 226953c16872d2c16e358a881cdb8cf7 456 Pfam PF07670 Nucleoside recognition 142 237 3.6E-8 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VSVS12_02114 76fa4681c4f4370a8c60bf17c6e34518 362 TIGRFAM TIGR01053 LSD1: zinc finger domain, LSD1 subclass 5 29 6.4E-4 T 11-10-2018 IPR005735 Zinc finger, LSD1-type VSVS12_01810 c8c4412be77005dc74a357e71ea63bdf 239 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 8 232 3.6E-39 T 11-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 VSVS12_01810 c8c4412be77005dc74a357e71ea63bdf 239 Gene3D G3DSA:3.20.20.190 1 237 2.7E-69 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VSVS12_01810 c8c4412be77005dc74a357e71ea63bdf 239 SUPERFAMILY SSF51695 4 235 1.55E-66 T 11-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 VSVS12_04239 d317ebf85df220df25d2e3ae29ee3d72 219 SUPERFAMILY SSF50475 2 184 3.73E-50 T 11-10-2018 VSVS12_04239 d317ebf85df220df25d2e3ae29ee3d72 219 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 24 162 5.7E-37 T 11-10-2018 IPR024747 Pyridoxamine 5'-phosphate oxidase-related VSVS12_04239 d317ebf85df220df25d2e3ae29ee3d72 219 Gene3D G3DSA:2.30.110.10 2 218 3.1E-59 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VSVS12_03642 8c01f59240d22ad151bb1d6343e9a1f7 208 SUPERFAMILY SSF50814 30 207 1.35E-22 T 11-10-2018 IPR012674 Calycin VSVS12_03642 8c01f59240d22ad151bb1d6343e9a1f7 208 PIRSF PIRSF036226 1 208 1.7E-72 T 11-10-2018 IPR014602 Uncharacterised conserved protein UCP036226 VSVS12_03642 8c01f59240d22ad151bb1d6343e9a1f7 208 Pfam PF08768 Domain of unknown function (DUF1794) 30 204 8.7E-16 T 11-10-2018 IPR014878 Domain of unknown function DUF1794 VSVS12_02961 23a0a6034562343b4b3752aab231e5c9 162 Gene3D G3DSA:1.20.120.1490 37 161 1.4E-29 T 11-10-2018 VSVS12_02961 23a0a6034562343b4b3752aab231e5c9 162 PIRSF PIRSF034445 2 157 4.5E-22 T 11-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 VSVS12_02961 23a0a6034562343b4b3752aab231e5c9 162 Pfam PF07813 LTXXQ motif family protein 38 146 2.9E-23 T 11-10-2018 IPR012899 LTXXQ motif family protein GO:0042597 VSVS12_02326 9488a6c6df44a4d6e2e61c838f30a387 115 Pfam PF11169 Protein of unknown function (DUF2956) 8 111 4.4E-40 T 11-10-2018 IPR021339 Protein of unknown function DUF2956 VSVS12_02490 2c2770cb878400e94045662d0c3c7aad 350 SUPERFAMILY SSF111337 1 345 4.71E-137 T 11-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 VSVS12_02490 2c2770cb878400e94045662d0c3c7aad 350 Gene3D G3DSA:2.40.10.240 64 163 1.1E-114 T 11-10-2018 VSVS12_02490 2c2770cb878400e94045662d0c3c7aad 350 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 345 7.4E-157 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 VSVS12_02490 2c2770cb878400e94045662d0c3c7aad 350 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 346 46.74 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 VSVS12_02490 2c2770cb878400e94045662d0c3c7aad 350 Gene3D G3DSA:3.40.1780.10 14 345 1.1E-114 T 11-10-2018 VSVS12_02490 2c2770cb878400e94045662d0c3c7aad 350 Pfam PF02547 Queuosine biosynthesis protein 3 345 1.5E-131 T 11-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 VSVS12_03193 e578b8d52e8deafccebd57f11c310fb9 397 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 84 130 3.1E-11 T 11-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain VSVS12_03193 e578b8d52e8deafccebd57f11c310fb9 397 Pfam PF01610 Transposase 149 388 9.8E-64 T 11-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain VSVS12_01926 d40d8969918a436fe4a897c7dd7d1f22 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 9.8E-76 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VSVS12_01926 d40d8969918a436fe4a897c7dd7d1f22 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 9.8E-76 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VSVS12_01926 d40d8969918a436fe4a897c7dd7d1f22 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 9.8E-76 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VSVS12_01926 d40d8969918a436fe4a897c7dd7d1f22 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 9.8E-76 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VSVS12_01926 d40d8969918a436fe4a897c7dd7d1f22 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 9.8E-76 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VSVS12_01926 d40d8969918a436fe4a897c7dd7d1f22 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 238 259 9.8E-76 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VSVS12_01926 d40d8969918a436fe4a897c7dd7d1f22 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 9.8E-76 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VSVS12_01926 d40d8969918a436fe4a897c7dd7d1f22 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 9.8E-76 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VSVS12_01926 d40d8969918a436fe4a897c7dd7d1f22 320 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 276 294 9.8E-76 T 11-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 VSVS12_01926 d40d8969918a436fe4a897c7dd7d1f22 320 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 9 300 1.8E-49 T 11-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 VSVS12_01926 d40d8969918a436fe4a897c7dd7d1f22 320 SUPERFAMILY SSF51905 2 313 1.68E-52 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_01926 d40d8969918a436fe4a897c7dd7d1f22 320 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 11-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 VSVS12_01926 d40d8969918a436fe4a897c7dd7d1f22 320 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 313 6.7E-124 T 11-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 VSVS12_01926 d40d8969918a436fe4a897c7dd7d1f22 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 7.5E-38 T 11-10-2018 VSVS12_01926 d40d8969918a436fe4a897c7dd7d1f22 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 7.5E-38 T 11-10-2018 VSVS12_01926 d40d8969918a436fe4a897c7dd7d1f22 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 7.5E-38 T 11-10-2018 VSVS12_01926 d40d8969918a436fe4a897c7dd7d1f22 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 288 7.5E-38 T 11-10-2018 VSVS12_01926 d40d8969918a436fe4a897c7dd7d1f22 320 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 236 252 7.5E-38 T 11-10-2018 VSVS12_01926 d40d8969918a436fe4a897c7dd7d1f22 320 Gene3D G3DSA:3.50.50.60 118 244 5.6E-129 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_01926 d40d8969918a436fe4a897c7dd7d1f22 320 Gene3D G3DSA:3.50.50.60 10 312 5.6E-129 T 11-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily VSVS12_02511 e6afa7fca98674160060eb725fe6f934 265 SUPERFAMILY SSF48452 71 218 5.61E-13 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_02511 e6afa7fca98674160060eb725fe6f934 265 Gene3D G3DSA:1.25.40.10 11 236 6.3E-19 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_04114 4cdd52f976d79fec72830de1afd7db8f 447 Pfam PF01526 Tn3 transposase DDE domain 54 440 1.1E-150 T 11-10-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 VSVS12_04113 98e96a55f77268c4d0847974ea27234a 306 Pfam PF13737 Transposase DDE domain 19 129 2.5E-44 T 11-10-2018 IPR025668 Transposase DDE domain VSVS12_02707 e1338ca73595a5edf488f73f38bab1ee 60 Pfam PF12728 Helix-turn-helix domain 5 52 1.8E-6 T 11-10-2018 VSVS12_03839 dc3fb2bc1f98d5bfca315f2e586bca16 106 PIRSF PIRSF028773 1 104 1.5E-45 T 11-10-2018 IPR007458 Protein of unknown function DUF496 VSVS12_03839 dc3fb2bc1f98d5bfca315f2e586bca16 106 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 1 95 23.719 T 11-10-2018 IPR007458 Protein of unknown function DUF496 VSVS12_03839 dc3fb2bc1f98d5bfca315f2e586bca16 106 Pfam PF04363 Protein of unknown function (DUF496) 1 92 3.7E-41 T 11-10-2018 IPR007458 Protein of unknown function DUF496 VSVS12_03839 dc3fb2bc1f98d5bfca315f2e586bca16 106 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 1 92 1.0E-40 T 11-10-2018 IPR007458 Protein of unknown function DUF496 VSVS12_01604 24501409f979487d0b2e6629045076e2 203 Pfam PF01613 Flavin reductase like domain 22 163 5.0E-19 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 VSVS12_01604 24501409f979487d0b2e6629045076e2 203 SUPERFAMILY SSF50475 2 198 3.58E-36 T 11-10-2018 VSVS12_01604 24501409f979487d0b2e6629045076e2 203 Gene3D G3DSA:2.30.110.10 1 203 5.9E-61 T 11-10-2018 IPR012349 FMN-binding split barrel GO:0048037 VSVS12_01604 24501409f979487d0b2e6629045076e2 203 SMART SM00903 19 166 3.4E-7 T 11-10-2018 IPR002563 Flavin reductase like domain GO:0010181 VSVS12_01673 a8a6baa4425d41e2de3ebdef6c4aa839 64 SUPERFAMILY SSF52833 4 59 5.68E-7 T 11-10-2018 IPR036249 Thioredoxin-like superfamily VSVS12_01673 a8a6baa4425d41e2de3ebdef6c4aa839 64 Pfam PF05768 Glutaredoxin-like domain (DUF836) 5 55 1.3E-10 T 11-10-2018 IPR008554 Glutaredoxin-like VSVS12_01673 a8a6baa4425d41e2de3ebdef6c4aa839 64 Gene3D G3DSA:3.40.30.10 1 63 3.2E-11 T 11-10-2018 VSVS12_03147 6a535733d399dc2552ebe343f414ccec 293 SUPERFAMILY SSF53067 8 290 3.5E-52 T 11-10-2018 VSVS12_03147 6a535733d399dc2552ebe343f414ccec 293 Pfam PF00480 ROK family 9 288 1.6E-63 T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VSVS12_03147 6a535733d399dc2552ebe343f414ccec 293 Gene3D G3DSA:3.30.420.40 123 274 8.4E-77 T 11-10-2018 VSVS12_03147 6a535733d399dc2552ebe343f414ccec 293 ProSitePatterns PS01125 ROK family signature. 133 160 - T 11-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 VSVS12_03147 6a535733d399dc2552ebe343f414ccec 293 Gene3D G3DSA:3.30.420.40 10 287 8.4E-77 T 11-10-2018 VSVS12_02358 7f0133f45940e5a03ccab154a4409907 345 Pfam PF12069 Protein of unknown function (DUF3549) 3 340 2.2E-136 T 11-10-2018 IPR021936 Protein of unknown function DUF3549 VSVS12_01589 cbc2e87320681e8703f3b7910a1c5afb 324 Pfam PF11383 Protein of unknown function (DUF3187) 20 320 4.3E-96 T 11-10-2018 IPR021523 Protein of unknown function DUF3187 VSVS12_00083 99e5163d2ef29c34220b36cd43d7411d 209 Pfam PF13309 HTH domain 145 205 2.2E-19 T 11-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain VSVS12_00083 99e5163d2ef29c34220b36cd43d7411d 209 Pfam PF08348 YheO-like PAS domain 4 115 6.2E-36 T 11-10-2018 IPR013559 YheO-like VSVS12_00083 99e5163d2ef29c34220b36cd43d7411d 209 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 4 104 5.0E-31 T 11-10-2018 IPR013559 YheO-like VSVS12_01503 19c2bc0bd94946400d60f8aab62c7171 443 SUPERFAMILY SSF103473 15 439 3.4E-26 T 11-10-2018 IPR036259 MFS transporter superfamily VSVS12_01503 19c2bc0bd94946400d60f8aab62c7171 443 Gene3D G3DSA:1.20.1250.20 14 435 9.4E-16 T 11-10-2018 VSVS12_02475 ca7de05b6355cccaa0d6a11a90f096cf 728 SUPERFAMILY SSF161098 424 660 4.82E-18 T 11-10-2018 IPR035906 MetI-like superfamily VSVS12_02475 ca7de05b6355cccaa0d6a11a90f096cf 728 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 446 722 1.7E-11 T 11-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 VSVS12_00145 6f0ece2c75a679e27b2abf50ff06cb82 275 Pfam PF08722 TnsA endonuclease N terminal 75 168 1.2E-19 T 11-10-2018 IPR014833 TnsA endonuclease, N-terminal VSVS12_00145 6f0ece2c75a679e27b2abf50ff06cb82 275 SUPERFAMILY SSF52980 10 172 1.93E-46 T 11-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 VSVS12_00145 6f0ece2c75a679e27b2abf50ff06cb82 275 Gene3D G3DSA:3.40.1350.10 9 172 1.4E-49 T 11-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 VSVS12_03177 cc4aa81361d35904544261d3c8e4ae75 119 Pfam PF05656 Protein of unknown function (DUF805) 11 111 7.1E-35 T 11-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 VSVS12_01593 91fa3e9c44e5c6665ee9f56e53507cff 472 Pfam PF00939 Sodium:sulfate symporter transmembrane region 4 462 4.0E-51 T 11-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VSVS12_01593 91fa3e9c44e5c6665ee9f56e53507cff 472 PIRSF PIRSF002457 1 472 1.5E-114 T 11-10-2018 IPR030676 Citrate carrier CitT-related VSVS12_01593 91fa3e9c44e5c6665ee9f56e53507cff 472 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 35 461 3.9E-79 T 11-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 VSVS12_02484 80b0bbd167ac3d271721ce0168b47032 291 PIRSF PIRSF018455 1 291 5.0E-108 T 11-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 VSVS12_02484 80b0bbd167ac3d271721ce0168b47032 291 Gene3D G3DSA:3.30.1380.10 23 291 3.4E-96 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VSVS12_02484 80b0bbd167ac3d271721ce0168b47032 291 Pfam PF03411 Penicillin-insensitive murein endopeptidase 39 287 2.5E-93 T 11-10-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 VSVS12_02484 80b0bbd167ac3d271721ce0168b47032 291 SUPERFAMILY SSF55166 25 289 4.71E-93 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VSVS12_00320 d4329678a26f1cc816232e0d95f23440 141 Pfam PF06146 Phosphate-starvation-inducible E 51 117 4.7E-14 T 11-10-2018 IPR020948 Phosphate-starvation-induced PsiE-like VSVS12_00320 d4329678a26f1cc816232e0d95f23440 141 PIRSF PIRSF029598 3 135 1.2E-38 T 11-10-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 VSVS12_04037 a7f515f57fbfb9cf9b4975275b6f4e97 87 Pfam PF07383 Protein of unknown function (DUF1496) 42 71 6.4E-7 T 11-10-2018 IPR009971 Protein of unknown function DUF1496 VSVS12_02177 3efd0f47490ea0d9558521dc7eeee790 501 Pfam PF14402 7 transmembrane helices usually fused to an inactive transglutaminase 255 498 5.2E-109 T 11-10-2018 IPR025840 7 transmembrane helices usually fused to an inactive transglutaminase VSVS12_02177 3efd0f47490ea0d9558521dc7eeee790 501 Pfam PF14400 Inactive transglutaminase fused to 7 transmembrane helices 24 183 3.6E-58 T 11-10-2018 IPR025838 Inactive transglutaminase fused to 7 transmembrane helices VSVS12_03076 d8c122bb1245e573f008ae778c1078f0 118 Pfam PF04219 Protein of unknown function, DUF 12 100 5.1E-36 T 11-10-2018 IPR007335 Protein of unknown function DUF413 VSVS12_02517 066fdd918646b41566e6cbcbffb88736 439 Pfam PF04972 BON domain 102 145 6.7E-6 T 11-10-2018 IPR007055 BON domain VSVS12_02517 066fdd918646b41566e6cbcbffb88736 439 PRINTS PR00811 Bacterial general secretion pathway protein D signature 356 374 2.0E-6 T 11-10-2018 IPR001775 GspD/PilQ family VSVS12_02517 066fdd918646b41566e6cbcbffb88736 439 PRINTS PR00811 Bacterial general secretion pathway protein D signature 186 196 2.0E-6 T 11-10-2018 IPR001775 GspD/PilQ family VSVS12_02517 066fdd918646b41566e6cbcbffb88736 439 Pfam PF13629 Pilus formation protein N terminal region 23 93 5.3E-16 T 11-10-2018 IPR032789 Pilus formation protein, N-terminal VSVS12_02517 066fdd918646b41566e6cbcbffb88736 439 Pfam PF00263 Bacterial type II and III secretion system protein 237 391 1.9E-38 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 VSVS12_03438 9126ebcbc0dc7b7c840167521e4b5125 471 Gene3D G3DSA:3.40.710.10 135 454 3.6E-58 T 11-10-2018 VSVS12_03438 9126ebcbc0dc7b7c840167521e4b5125 471 Pfam PF00144 Beta-lactamase 175 446 3.0E-20 T 11-10-2018 IPR001466 Beta-lactamase-related VSVS12_03438 9126ebcbc0dc7b7c840167521e4b5125 471 SUPERFAMILY SSF56601 127 465 2.95E-56 T 11-10-2018 IPR012338 Beta-lactamase/transpeptidase-like VSVS12_01206 8658af683e576a222386dcdc06462e38 156 Pfam PF00005 ABC transporter 22 155 4.0E-14 T 11-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 VSVS12_01206 8658af683e576a222386dcdc06462e38 156 Gene3D G3DSA:3.40.50.300 1 156 1.6E-25 T 11-10-2018 VSVS12_01206 8658af683e576a222386dcdc06462e38 156 SUPERFAMILY SSF52540 2 156 2.73E-24 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01450 43f8018ab645aec3d73b7456618e88fe 168 Pfam PF11286 Protein of unknown function (DUF3087) 1 165 4.8E-63 T 11-10-2018 IPR021438 Protein of unknown function DUF3087 VSVS12_02480 5775393a9e14b39f9008d2e8c695357f 304 Pfam PF04381 Putative exonuclease, RdgC 1 298 9.8E-125 T 11-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 VSVS12_02480 5775393a9e14b39f9008d2e8c695357f 304 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 1 301 39.556 T 11-10-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 VSVS12_01408 5ef921589cecd27180e6ff6b6f2e4b37 164 Gene3D G3DSA:2.40.160.20 18 164 3.5E-22 T 11-10-2018 VSVS12_01408 5ef921589cecd27180e6ff6b6f2e4b37 164 SUPERFAMILY SSF56925 19 163 1.1E-17 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VSVS12_01408 5ef921589cecd27180e6ff6b6f2e4b37 164 Pfam PF13505 Outer membrane protein beta-barrel domain 5 163 1.4E-15 T 11-10-2018 IPR027385 Outer membrane protein beta-barrel VSVS12_02901 250d9f2e6546a4f25145a48d3090d44f 61 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 59 4.1E-23 T 11-10-2018 IPR019201 Protein of unknown function DUF2065 VSVS12_00365 1d4898b715491f6a2f0478dca11fbb46 80 Pfam PF06005 Cell division protein ZapB 1 77 4.9E-26 T 11-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 VSVS12_00365 1d4898b715491f6a2f0478dca11fbb46 80 Hamap MF_01196 Cell division protein ZapB [zapB]. 1 79 17.611 T 11-10-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 VSVS12_00365 1d4898b715491f6a2f0478dca11fbb46 80 Gene3D G3DSA:1.20.5.340 1 79 5.2E-28 T 11-10-2018 VSVS12_03589 9b3e0f66290d01f74a4e0adc521af4e8 378 SUPERFAMILY SSF55781 17 140 1.47E-6 T 11-10-2018 VSVS12_03589 9b3e0f66290d01f74a4e0adc521af4e8 378 Gene3D G3DSA:3.30.450.40 8 155 6.8E-6 T 11-10-2018 IPR029016 GAF-like domain superfamily VSVS12_03589 9b3e0f66290d01f74a4e0adc521af4e8 378 Pfam PF13487 HD domain 273 303 3.9E-9 T 11-10-2018 VSVS12_03589 9b3e0f66290d01f74a4e0adc521af4e8 378 Gene3D G3DSA:1.10.3210.10 156 366 4.5E-36 T 11-10-2018 VSVS12_03589 9b3e0f66290d01f74a4e0adc521af4e8 378 SUPERFAMILY SSF109604 176 351 6.6E-13 T 11-10-2018 VSVS12_01177 d496ce27d4953c460bf787ca70b8f2ef 144 Pfam PF02472 Biopolymer transport protein ExbD/TolR 11 142 2.2E-22 T 11-10-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0022857|GO:0055085 VSVS12_03327 bd81918ffe1f2494ea4c63ed9882b078 141 SUPERFAMILY SSF64288 2 138 1.02E-39 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VSVS12_03327 bd81918ffe1f2494ea4c63ed9882b078 141 Pfam PF07702 UTRA domain 2 131 4.3E-34 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VSVS12_03327 bd81918ffe1f2494ea4c63ed9882b078 141 SMART SM00866 1 131 1.0E-26 T 11-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 VSVS12_03327 bd81918ffe1f2494ea4c63ed9882b078 141 Gene3D G3DSA:3.40.1410.10 1 135 3.6E-37 T 11-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily VSVS12_02024 ebb0b42615bd90332db11cd7ff730e10 98 Pfam PF03795 YCII-related domain 1 95 1.7E-27 T 11-10-2018 IPR005545 YCII-related VSVS12_02024 ebb0b42615bd90332db11cd7ff730e10 98 SUPERFAMILY SSF54909 1 98 3.4E-31 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel VSVS12_02024 ebb0b42615bd90332db11cd7ff730e10 98 Gene3D G3DSA:3.30.70.1060 1 98 1.1E-37 T 11-10-2018 VSVS12_01733 2a2ef872301495d3e03cb3141ba8b088 114 Pfam PF12290 Protein of unknown function (DUF3802) 1 110 5.8E-44 T 11-10-2018 IPR020979 Uncharacterised protein family A0KLC6 VSVS12_04487 53d406d50c35d67ca7e23fa770c9bd7e 194 Pfam PF11140 Protein of unknown function (DUF2913) 8 177 3.6E-20 T 11-10-2018 IPR021316 Protein of unknown function DUF2913 VSVS12_00825 1dbf67e55fb61afedc0c711f1c2d9b52 190 Pfam PF03923 Uncharacterized lipoprotein 29 187 4.6E-49 T 11-10-2018 IPR005619 Uncharacterised protein family, YajG VSVS12_02067 dca2dc9cbd72c3151ad516cbce808dec 434 Pfam PF00294 pfkB family carbohydrate kinase 74 294 3.3E-11 T 11-10-2018 IPR011611 Carbohydrate kinase PfkB VSVS12_02067 dca2dc9cbd72c3151ad516cbce808dec 434 SUPERFAMILY SSF53613 31 416 1.28E-44 T 11-10-2018 IPR029056 Ribokinase-like VSVS12_02871 44fa2b5f730d49a0b763c72ca4f193c6 221 Pfam PF10986 Protein of unknown function (DUF2796) 29 144 8.0E-32 T 11-10-2018 IPR021253 Protein of unknown function DUF2796 VSVS12_02871 44fa2b5f730d49a0b763c72ca4f193c6 221 Pfam PF10986 Protein of unknown function (DUF2796) 134 217 1.3E-18 T 11-10-2018 IPR021253 Protein of unknown function DUF2796 VSVS12_01694 93babf3691d4a776a67ff8f1a51d3489 275 Gene3D G3DSA:1.10.530.10 125 266 2.7E-15 T 11-10-2018 VSVS12_01694 93babf3691d4a776a67ff8f1a51d3489 275 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 127 264 1.5E-17 T 11-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 VSVS12_00009 5f60f706b828b9b2f7052a06a3e259fb 136 Pfam PF03748 Flagellar basal body-associated protein FliL 34 136 7.2E-20 T 11-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 VSVS12_03328 edb24783bc51fe4673d6197b6c396a14 248 Gene3D G3DSA:3.40.50.150 9 214 4.0E-17 T 11-10-2018 VSVS12_03328 edb24783bc51fe4673d6197b6c396a14 248 Pfam PF13489 Methyltransferase domain 39 210 3.8E-8 T 11-10-2018 VSVS12_03328 edb24783bc51fe4673d6197b6c396a14 248 SUPERFAMILY SSF53335 27 217 1.77E-18 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_03228 651f2f9307cccfab7bd33296f8149d68 134 Pfam PF06995 Phage P2 GpU 22 133 3.4E-18 T 11-10-2018 IPR009734 Myoviridae, GpU VSVS12_03978 91c6e7beb2aff2735e3a3f2b2d859ba9 316 Pfam PF01032 FecCD transport family 27 312 1.9E-52 T 11-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 VSVS12_03978 91c6e7beb2aff2735e3a3f2b2d859ba9 316 Gene3D G3DSA:1.10.3470.10 4 315 1.6E-56 T 11-10-2018 IPR037294 ABC transporter, BtuC-like VSVS12_03978 91c6e7beb2aff2735e3a3f2b2d859ba9 316 SUPERFAMILY SSF81345 7 313 1.09E-56 T 11-10-2018 IPR037294 ABC transporter, BtuC-like VSVS12_00905 34d65ff810ede4fb09f513aadc6d8796 117 Gene3D G3DSA:2.40.128.200 25 116 4.6E-11 T 11-10-2018 IPR036328 C-type lysozyme inhibitor superfamily VSVS12_00905 34d65ff810ede4fb09f513aadc6d8796 117 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 34 107 3.4E-11 T 11-10-2018 IPR018660 C-type lysozyme inhibitor VSVS12_00905 34d65ff810ede4fb09f513aadc6d8796 117 SUPERFAMILY SSF141488 29 111 5.62E-9 T 11-10-2018 IPR036328 C-type lysozyme inhibitor superfamily VSVS12_02072 73a0d9e18861f33f8180cc53f3ab46b9 176 Pfam PF12915 Protein of unknown function (DUF3833) 14 175 4.6E-63 T 11-10-2018 IPR024409 Protein of unknown function DUF3833 VSVS12_03219 2c7b76ee65294b89b1a3ee431b1cd39d 162 Pfam PF04985 Phage tail tube protein FII 9 114 3.6E-11 T 11-10-2018 IPR006498 Tail tube protein VSVS12_01351 b5d5271d9848335eb5c2276cb231374f 468 SUPERFAMILY SSF48452 71 267 5.0E-8 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_00799 1de14ec2d296092b30caf8ae44a3069b 162 Pfam PF13592 Winged helix-turn helix 100 156 2.1E-13 T 11-10-2018 IPR025959 Winged helix-turn helix domain VSVS12_00799 1de14ec2d296092b30caf8ae44a3069b 162 Pfam PF13551 Winged helix-turn helix 24 83 5.6E-13 T 11-10-2018 VSVS12_00799 1de14ec2d296092b30caf8ae44a3069b 162 SUPERFAMILY SSF46689 16 132 1.79E-18 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_00852 d99bdf3cdd54fc36138492bae0008f51 149 Pfam PF03477 ATP cone domain 50 136 4.2E-15 T 11-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 VSVS12_00852 d99bdf3cdd54fc36138492bae0008f51 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 2.5E-72 T 11-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 VSVS12_00852 d99bdf3cdd54fc36138492bae0008f51 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 89.521 T 11-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 VSVS12_03428 3b15d0f750ff38670111440e72d33046 96 Gene3D G3DSA:3.30.70.100 1 96 3.3E-29 T 11-10-2018 VSVS12_03428 3b15d0f750ff38670111440e72d33046 96 Pfam PF03992 Antibiotic biosynthesis monooxygenase 5 78 4.6E-17 T 11-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain VSVS12_03428 3b15d0f750ff38670111440e72d33046 96 SUPERFAMILY SSF54909 2 90 1.24E-29 T 11-10-2018 IPR011008 Dimeric alpha-beta barrel VSVS12_03918 85723b73e420a4175c9548c00ef8e93c 314 Pfam PF03741 Integral membrane protein TerC family 75 276 1.7E-54 T 11-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 VSVS12_03918 85723b73e420a4175c9548c00ef8e93c 314 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 4 308 7.0E-104 T 11-10-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 VSVS12_03447 18424300b3b5bd2e066dc8c4dfe0626c 175 Gene3D G3DSA:3.40.50.300 1 173 1.8E-27 T 11-10-2018 VSVS12_03447 18424300b3b5bd2e066dc8c4dfe0626c 175 SUPERFAMILY SSF52540 1 172 3.26E-19 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03447 18424300b3b5bd2e066dc8c4dfe0626c 175 Pfam PF13671 AAA domain 6 121 2.1E-13 T 11-10-2018 VSVS12_04411 2aa09aff48d2cc2f26a6764388def1da 416 TIGRFAM TIGR03748 conj_PilL: integrating conjugative element protein PilL, PFGI-1 class 44 148 2.5E-20 T 11-10-2018 IPR022260 Integrating conjugative element protein PilL, PFGI-1 VSVS12_02826 92c1bd86b7946be70e52cd91ab9af5f2 357 PIRSF PIRSF039026 1 357 4.7E-130 T 11-10-2018 IPR026289 Solute binding protein, mannitol/chloroaromatic system-like VSVS12_02826 92c1bd86b7946be70e52cd91ab9af5f2 357 Gene3D G3DSA:3.40.190.10 152 323 6.2E-115 T 11-10-2018 VSVS12_02826 92c1bd86b7946be70e52cd91ab9af5f2 357 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 36 323 1.0E-71 T 11-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 VSVS12_02826 92c1bd86b7946be70e52cd91ab9af5f2 357 Gene3D G3DSA:3.40.190.170 34 344 6.2E-115 T 11-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily VSVS12_01562 ca578277becb7b12218a4f9e1a81a0b0 471 Pfam PF02321 Outer membrane efflux protein 50 229 1.7E-10 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VSVS12_01562 ca578277becb7b12218a4f9e1a81a0b0 471 Pfam PF02321 Outer membrane efflux protein 276 455 1.7E-16 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VSVS12_01562 ca578277becb7b12218a4f9e1a81a0b0 471 SUPERFAMILY SSF56954 7 456 1.7E-40 T 11-10-2018 VSVS12_01562 ca578277becb7b12218a4f9e1a81a0b0 471 Gene3D G3DSA:1.20.1600.10 45 456 3.1E-32 T 11-10-2018 VSVS12_02320 a7066bb01fa516d90a76f5201cd149df 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 161 183 6.2E-73 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VSVS12_02320 a7066bb01fa516d90a76f5201cd149df 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 246 266 6.2E-73 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VSVS12_02320 a7066bb01fa516d90a76f5201cd149df 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 212 238 6.2E-73 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VSVS12_02320 a7066bb01fa516d90a76f5201cd149df 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 134 151 6.2E-73 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VSVS12_02320 a7066bb01fa516d90a76f5201cd149df 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 276 296 6.2E-73 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VSVS12_02320 a7066bb01fa516d90a76f5201cd149df 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 79 105 6.2E-73 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VSVS12_02320 a7066bb01fa516d90a76f5201cd149df 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 312 331 6.2E-73 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VSVS12_02320 a7066bb01fa516d90a76f5201cd149df 639 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 296 312 6.2E-73 T 11-10-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 VSVS12_02320 a7066bb01fa516d90a76f5201cd149df 639 Pfam PF01578 Cytochrome C assembly protein 88 298 1.4E-41 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 VSVS12_02320 a7066bb01fa516d90a76f5201cd149df 639 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 317 622 2.4E-57 T 11-10-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal VSVS12_02320 a7066bb01fa516d90a76f5201cd149df 639 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 2.3E-9 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VSVS12_02320 a7066bb01fa516d90a76f5201cd149df 639 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 353 370 2.3E-9 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VSVS12_02320 a7066bb01fa516d90a76f5201cd149df 639 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 191 206 2.3E-9 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VSVS12_02320 a7066bb01fa516d90a76f5201cd149df 639 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 317 332 2.3E-9 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VSVS12_02320 a7066bb01fa516d90a76f5201cd149df 639 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 396 415 2.3E-9 T 11-10-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 VSVS12_01255 26e15a401fc51f07cabccb4ac135f900 173 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 11 31 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_01255 26e15a401fc51f07cabccb4ac135f900 173 SUPERFAMILY SSF54523 14 151 6.12E-8 T 11-10-2018 VSVS12_01255 26e15a401fc51f07cabccb4ac135f900 173 Pfam PF07963 Prokaryotic N-terminal methylation motif 8 32 1.0E-4 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_01255 26e15a401fc51f07cabccb4ac135f900 173 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 11 32 2.9E-5 T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_01255 26e15a401fc51f07cabccb4ac135f900 173 Gene3D G3DSA:3.30.700.10 13 120 3.2E-6 T 11-10-2018 VSVS12_02540 b67e02db061621c2fc3b3f60169b5392 257 Pfam PF03883 Peroxide stress protein YaaA 1 243 3.4E-94 T 11-10-2018 IPR005583 Peroxide stress protein YaaA VSVS12_02540 b67e02db061621c2fc3b3f60169b5392 257 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 38.835 T 11-10-2018 IPR005583 Peroxide stress protein YaaA VSVS12_01531 aa75b1ce1f283508d8070bf12e562c5b 456 PRINTS PR00175 Sodium/alanine symporter signature 306 324 6.8E-53 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VSVS12_01531 aa75b1ce1f283508d8070bf12e562c5b 456 PRINTS PR00175 Sodium/alanine symporter signature 211 230 6.8E-53 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VSVS12_01531 aa75b1ce1f283508d8070bf12e562c5b 456 PRINTS PR00175 Sodium/alanine symporter signature 411 431 6.8E-53 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VSVS12_01531 aa75b1ce1f283508d8070bf12e562c5b 456 PRINTS PR00175 Sodium/alanine symporter signature 352 374 6.8E-53 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VSVS12_01531 aa75b1ce1f283508d8070bf12e562c5b 456 PRINTS PR00175 Sodium/alanine symporter signature 183 201 6.8E-53 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VSVS12_01531 aa75b1ce1f283508d8070bf12e562c5b 456 PRINTS PR00175 Sodium/alanine symporter signature 91 113 6.8E-53 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VSVS12_01531 aa75b1ce1f283508d8070bf12e562c5b 456 Pfam PF01235 Sodium:alanine symporter family 53 450 1.7E-139 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VSVS12_01531 aa75b1ce1f283508d8070bf12e562c5b 456 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 91 106 - T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VSVS12_01531 aa75b1ce1f283508d8070bf12e562c5b 456 TIGRFAM TIGR00835 agcS: amino acid carrier protein 16 440 1.5E-156 T 11-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 VSVS12_02041 f73162b45583bbe10cce5c451f5e2346 66 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 1 52 1.0E-10 T 11-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 VSVS12_02041 f73162b45583bbe10cce5c451f5e2346 66 Gene3D G3DSA:3.90.1150.10 1 56 5.3E-14 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VSVS12_02041 f73162b45583bbe10cce5c451f5e2346 66 SUPERFAMILY SSF53383 2 53 1.07E-7 T 11-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase VSVS12_04515 086499d041f1693a5cc332b780908997 364 Pfam PF13416 Bacterial extracellular solute-binding protein 60 335 1.2E-31 T 11-10-2018 IPR006059 Bacterial extracellular solute-binding protein VSVS12_04515 086499d041f1693a5cc332b780908997 364 Gene3D G3DSA:3.40.190.10 150 344 2.7E-27 T 11-10-2018 VSVS12_04515 086499d041f1693a5cc332b780908997 364 Gene3D G3DSA:3.40.190.10 56 341 2.7E-27 T 11-10-2018 VSVS12_04515 086499d041f1693a5cc332b780908997 364 SUPERFAMILY SSF53850 41 334 1.89E-41 T 11-10-2018 VSVS12_01936 337b662c709439ef3f13f7456591ded6 108 Gene3D G3DSA:3.40.50.360 1 106 6.1E-17 T 11-10-2018 IPR029039 Flavoprotein-like superfamily VSVS12_01936 337b662c709439ef3f13f7456591ded6 108 Pfam PF02525 Flavodoxin-like fold 1 82 1.9E-12 T 11-10-2018 IPR003680 Flavodoxin-like fold VSVS12_01936 337b662c709439ef3f13f7456591ded6 108 SUPERFAMILY SSF52218 1 104 3.29E-21 T 11-10-2018 IPR029039 Flavoprotein-like superfamily VSVS12_02809 f5162f5156fb4be26d8d8d6994ec9608 60 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 1 51 4.1E-26 T 11-10-2018 IPR010260 DNA-binding transcriptional activator AlpA VSVS12_03708 7e10e1dd104bca9d055615f8c2d78615 570 Pfam PF07510 Protein of unknown function (DUF1524) 436 564 2.2E-9 T 11-10-2018 IPR011089 Domain of unknown function DUF1524 VSVS12_03708 7e10e1dd104bca9d055615f8c2d78615 570 Pfam PF03235 Protein of unknown function DUF262 11 237 1.6E-36 T 11-10-2018 IPR004919 Domain of unknown function DUF262 VSVS12_03352 20d69079ea8c31eff5cbc7f1b65c33d8 583 Pfam PF12793 Sugar transport-related sRNA regulator N-term 6 119 2.2E-34 T 11-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain VSVS12_03352 20d69079ea8c31eff5cbc7f1b65c33d8 583 SUPERFAMILY SSF53850 117 581 2.53E-51 T 11-10-2018 VSVS12_03352 20d69079ea8c31eff5cbc7f1b65c33d8 583 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 165 310 2.5E-14 T 11-10-2018 IPR000914 Solute-binding protein family 5 domain VSVS12_03352 20d69079ea8c31eff5cbc7f1b65c33d8 583 Gene3D G3DSA:3.40.190.10 121 351 5.8E-22 T 11-10-2018 VSVS12_00150 873d247447e78854baf9430a5c7ad3c2 294 SUPERFAMILY SSF103481 183 276 1.7E-6 T 11-10-2018 VSVS12_00150 873d247447e78854baf9430a5c7ad3c2 294 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 274 4.3E-74 T 11-10-2018 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 VSVS12_00150 873d247447e78854baf9430a5c7ad3c2 294 Pfam PF00892 EamA-like transporter family 138 276 1.6E-8 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VSVS12_02808 170eab05fe8a03fd06fe68b2ba68b12d 191 ProDom PD108516 CS5 PRECURSOR SUBUNIT SIGNAL MAJOR FIMBRIAL PILIN FIMBRIA COLONIZATION PCF8775 1 188 9.0E-6 T 11-10-2018 VSVS12_03247 846250e5755cba647ba714337e1e18d7 76 ProDom PD056718 MU-LIKE HI1485 FLUMU VERY PROPHAGE 11 59 0.008 T 11-10-2018 IPR020107 Uncharacterised protein family HI1485 VSVS12_03790 020efceb0eca9c45a3e84b832ac0aba5 333 Gene3D G3DSA:3.40.50.1360 59 324 1.3E-76 T 11-10-2018 VSVS12_03790 020efceb0eca9c45a3e84b832ac0aba5 333 Pfam PF04198 Putative sugar-binding domain 65 319 7.5E-72 T 11-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 VSVS12_03790 020efceb0eca9c45a3e84b832ac0aba5 333 SUPERFAMILY SSF100950 69 319 6.42E-60 T 11-10-2018 IPR037171 NagB/RpiA transferase-like VSVS12_03790 020efceb0eca9c45a3e84b832ac0aba5 333 Gene3D G3DSA:1.10.10.60 9 58 1.1E-17 T 11-10-2018 VSVS12_02568 9e20de7754b521d83693364975de4d24 105 Pfam PF04999 Cell division protein FtsL 8 103 5.1E-35 T 11-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 VSVS12_02568 9e20de7754b521d83693364975de4d24 105 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 20 102 6.9E-26 T 11-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 VSVS12_02568 9e20de7754b521d83693364975de4d24 105 Hamap MF_00910 Cell division protein FtsL [ftsL]. 19 102 16.485 T 11-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 VSVS12_00348 753e7e5e085bc6977d6a3af3b5283561 183 Gene3D G3DSA:3.40.50.11190 1 146 2.8E-23 T 11-10-2018 VSVS12_00013 72328161a618fba82864ef149cb9e8e6 320 PIRSF PIRSF003097 23 316 3.2E-59 T 11-10-2018 IPR004513 Cell division protein FtsX GO:0016021 VSVS12_00117 cc88f19a52df361fd977297583661ab8 186 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 179 16.223 T 11-10-2018 IPR007336 Der GTPase activator GO:0005096 VSVS12_00117 cc88f19a52df361fd977297583661ab8 186 Pfam PF04220 Der GTPase activator (YihI) 20 176 1.4E-42 T 11-10-2018 IPR007336 Der GTPase activator GO:0005096 VSVS12_03863 4c0899ba23454ced7c99e190bfe518e3 124 Pfam PF04076 Bacterial OB fold (BOF) protein 47 122 5.8E-8 T 11-10-2018 IPR005220 Bacterial OB-fold VSVS12_03863 4c0899ba23454ced7c99e190bfe518e3 124 SUPERFAMILY SSF101756 31 124 4.97E-20 T 11-10-2018 IPR036700 Bacterial OB-fold superfamily VSVS12_03863 4c0899ba23454ced7c99e190bfe518e3 124 Gene3D G3DSA:2.40.50.200 21 124 6.1E-16 T 11-10-2018 IPR036700 Bacterial OB-fold superfamily VSVS12_02181 caf5e295365a250d35c1befdd3f36899 237 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 10 236 49.039 T 11-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 VSVS12_02181 caf5e295365a250d35c1befdd3f36899 237 Gene3D G3DSA:1.10.10.2260 88 194 4.0E-49 T 11-10-2018 VSVS12_02181 caf5e295365a250d35c1befdd3f36899 237 Pfam PF04288 MukE-like family 10 234 1.2E-118 T 11-10-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 VSVS12_02181 caf5e295365a250d35c1befdd3f36899 237 Gene3D G3DSA:1.10.10.2250 1 78 9.5E-36 T 11-10-2018 VSVS12_01256 332a2b5bc1d6ec93ca47ffe7426fa30d 214 SUPERFAMILY SSF56925 83 214 3.92E-14 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VSVS12_01256 332a2b5bc1d6ec93ca47ffe7426fa30d 214 Gene3D G3DSA:2.40.160.20 48 210 1.5E-11 T 11-10-2018 VSVS12_04366 fee49e617ac4d8b91bc7e006d4fa17d3 489 SUPERFAMILY SSF48452 123 316 5.69E-16 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_04366 fee49e617ac4d8b91bc7e006d4fa17d3 489 Gene3D G3DSA:1.25.40.10 11 169 1.8E-11 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_04366 fee49e617ac4d8b91bc7e006d4fa17d3 489 SMART SM00028 127 160 14.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_04366 fee49e617ac4d8b91bc7e006d4fa17d3 489 SMART SM00028 247 280 420.0 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_04366 fee49e617ac4d8b91bc7e006d4fa17d3 489 SMART SM00028 207 240 0.12 T 11-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 VSVS12_04366 fee49e617ac4d8b91bc7e006d4fa17d3 489 Gene3D G3DSA:1.25.40.10 170 318 4.8E-10 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_04366 fee49e617ac4d8b91bc7e006d4fa17d3 489 SUPERFAMILY SSF48452 50 164 1.01E-5 T 11-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 VSVS12_00246 9430cf5d500de6ea6f4788324d77d129 88 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 1.4E-45 T 11-10-2018 IPR009383 Protein of unknown function DUF1040 VSVS12_00246 9430cf5d500de6ea6f4788324d77d129 88 Gene3D G3DSA:1.10.1580.20 1 88 4.9E-44 T 11-10-2018 IPR038134 YihD-like superfamily VSVS12_00246 9430cf5d500de6ea6f4788324d77d129 88 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 2.0E-36 T 11-10-2018 IPR009383 Protein of unknown function DUF1040 VSVS12_03472 473d65ae70ba62ff49bacd8153e51019 391 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 4 377 9.2E-96 T 11-10-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 VSVS12_00242 559df78bc6bafca02d5711359309946d 328 Pfam PF11059 Protein of unknown function (DUF2860) 26 327 4.0E-105 T 11-10-2018 IPR016896 Protein of unknown function DUF2860 VSVS12_00242 559df78bc6bafca02d5711359309946d 328 PIRSF PIRSF028696 1 328 2.3E-109 T 11-10-2018 IPR016896 Protein of unknown function DUF2860 VSVS12_01156 2f1301d6635f8af44c0f51e9e81e542b 495 Pfam PF10022 Uncharacterized protein conserved in bacteria (DUF2264) 64 408 3.1E-84 T 11-10-2018 IPR016624 Uncharacterised conserved protein UCP014753 VSVS12_01156 2f1301d6635f8af44c0f51e9e81e542b 495 PIRSF PIRSF014753 35 446 4.1E-96 T 11-10-2018 IPR016624 Uncharacterised conserved protein UCP014753 VSVS12_03463 a7cc8389d5ab34eb9deeb8a196fdb71d 83 Pfam PF11212 Protein of unknown function (DUF2999) 1 82 1.6E-43 T 11-10-2018 IPR021376 Protein of unknown function DUF2999 VSVS12_03475 6c70e1a7a7459bb99e36db4f6228e7a2 89 Gene3D G3DSA:1.20.120.910 1 71 6.9E-20 T 11-10-2018 VSVS12_03475 6c70e1a7a7459bb99e36db4f6228e7a2 89 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 39 69 1.2E-12 T 11-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 VSVS12_03475 6c70e1a7a7459bb99e36db4f6228e7a2 89 SUPERFAMILY SSF57716 39 70 3.28E-7 T 11-10-2018 VSVS12_03757 9421cd193f001af41923ac91e8dba132 762 Gene3D G3DSA:2.60.120.260 51 179 1.8E-20 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily VSVS12_03757 9421cd193f001af41923ac91e8dba132 762 Pfam PF03170 Bacterial cellulose synthase subunit 50 661 1.5E-202 T 11-10-2018 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 VSVS12_03757 9421cd193f001af41923ac91e8dba132 762 Gene3D G3DSA:2.60.120.260 338 496 7.7E-28 T 11-10-2018 IPR008979 Galactose-binding-like domain superfamily VSVS12_03757 9421cd193f001af41923ac91e8dba132 762 PRINTS PR01440 Cellulose synthase subunit B signature 504 523 5.6E-37 T 11-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 VSVS12_03757 9421cd193f001af41923ac91e8dba132 762 PRINTS PR01440 Cellulose synthase subunit B signature 456 475 5.6E-37 T 11-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 VSVS12_03757 9421cd193f001af41923ac91e8dba132 762 PRINTS PR01440 Cellulose synthase subunit B signature 289 310 5.6E-37 T 11-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 VSVS12_03757 9421cd193f001af41923ac91e8dba132 762 PRINTS PR01440 Cellulose synthase subunit B signature 208 231 5.6E-37 T 11-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 VSVS12_03757 9421cd193f001af41923ac91e8dba132 762 PRINTS PR01440 Cellulose synthase subunit B signature 125 148 5.6E-37 T 11-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 VSVS12_03757 9421cd193f001af41923ac91e8dba132 762 PRINTS PR01440 Cellulose synthase subunit B signature 541 561 5.6E-37 T 11-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 VSVS12_03757 9421cd193f001af41923ac91e8dba132 762 PRINTS PR01440 Cellulose synthase subunit B signature 166 187 5.6E-37 T 11-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 VSVS12_03757 9421cd193f001af41923ac91e8dba132 762 PRINTS PR01440 Cellulose synthase subunit B signature 76 97 5.6E-37 T 11-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 VSVS12_03757 9421cd193f001af41923ac91e8dba132 762 PRINTS PR01440 Cellulose synthase subunit B signature 700 720 5.6E-37 T 11-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 VSVS12_03757 9421cd193f001af41923ac91e8dba132 762 PRINTS PR01440 Cellulose synthase subunit B signature 372 393 5.6E-37 T 11-10-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 VSVS12_00258 71c325432c9045a220e7d799dcd63b90 269 Gene3D G3DSA:3.30.1490.20 1 66 6.0E-15 T 11-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 VSVS12_00258 71c325432c9045a220e7d799dcd63b90 269 Pfam PF02222 ATP-grasp domain 2 163 5.5E-50 T 11-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type VSVS12_00258 71c325432c9045a220e7d799dcd63b90 269 SUPERFAMILY SSF51246 188 257 6.28E-19 T 11-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 VSVS12_00258 71c325432c9045a220e7d799dcd63b90 269 Gene3D G3DSA:3.30.470.20 67 257 1.9E-69 T 11-10-2018 VSVS12_00258 71c325432c9045a220e7d799dcd63b90 269 SUPERFAMILY SSF56059 2 184 5.66E-52 T 11-10-2018 VSVS12_00960 47518ea0149b406d63f361fa7cde7fe8 217 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 29 210 7.6E-25 T 11-10-2018 IPR018635 Uncharacterised protein family UPF0319 VSVS12_01123 f8771e7d6cdd5b2d6f8253f9f601e78a 324 Gene3D G3DSA:1.10.8.350 36 199 3.4E-92 T 11-10-2018 VSVS12_01123 f8771e7d6cdd5b2d6f8253f9f601e78a 324 SUPERFAMILY SSF53955 9 321 4.5E-101 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily VSVS12_01123 f8771e7d6cdd5b2d6f8253f9f601e78a 324 TIGRFAM TIGR02283 MltB_2: lytic murein transglycosylase 23 321 1.1E-110 T 11-10-2018 IPR011970 Lytic murein transglycosylase VSVS12_01123 f8771e7d6cdd5b2d6f8253f9f601e78a 324 Gene3D G3DSA:1.10.530.10 66 318 3.4E-92 T 11-10-2018 VSVS12_01123 f8771e7d6cdd5b2d6f8253f9f601e78a 324 Pfam PF13406 Transglycosylase SLT domain 23 319 9.2E-110 T 11-10-2018 IPR031304 Transglycosylase SLT domain 2 VSVS12_03682 2e61a98726f6f9697bab6a3946396a97 221 Pfam PF00805 Pentapeptide repeats (8 copies) 61 80 0.011 T 11-10-2018 IPR001646 Pentapeptide repeat VSVS12_03682 2e61a98726f6f9697bab6a3946396a97 221 Pfam PF00805 Pentapeptide repeats (8 copies) 180 203 0.0065 T 11-10-2018 IPR001646 Pentapeptide repeat VSVS12_03682 2e61a98726f6f9697bab6a3946396a97 221 SUPERFAMILY SSF141571 5 54 9.42E-10 T 11-10-2018 VSVS12_03682 2e61a98726f6f9697bab6a3946396a97 221 Pfam PF13599 Pentapeptide repeats (9 copies) 13 53 6.3E-7 T 11-10-2018 IPR001646 Pentapeptide repeat VSVS12_03682 2e61a98726f6f9697bab6a3946396a97 221 Pfam PF13599 Pentapeptide repeats (9 copies) 104 173 1.8E-10 T 11-10-2018 IPR001646 Pentapeptide repeat VSVS12_03682 2e61a98726f6f9697bab6a3946396a97 221 Gene3D G3DSA:2.160.20.80 8 221 1.8E-58 T 11-10-2018 VSVS12_03682 2e61a98726f6f9697bab6a3946396a97 221 SUPERFAMILY SSF141571 59 220 6.41E-37 T 11-10-2018 VSVS12_01069 96430ec145c08857d768601b36f5a517 138 Pfam PF00571 CBS domain 73 127 1.2E-12 T 11-10-2018 IPR000644 CBS domain VSVS12_01069 96430ec145c08857d768601b36f5a517 138 Pfam PF00571 CBS domain 6 60 3.5E-6 T 11-10-2018 IPR000644 CBS domain VSVS12_01069 96430ec145c08857d768601b36f5a517 138 SUPERFAMILY SSF54631 1 127 3.28E-31 T 11-10-2018 VSVS12_01069 96430ec145c08857d768601b36f5a517 138 SMART SM00116 80 127 2.7E-7 T 11-10-2018 IPR000644 CBS domain VSVS12_01069 96430ec145c08857d768601b36f5a517 138 SMART SM00116 13 61 0.41 T 11-10-2018 IPR000644 CBS domain VSVS12_01069 96430ec145c08857d768601b36f5a517 138 Gene3D G3DSA:3.10.580.10 1 132 5.7E-28 T 11-10-2018 VSVS12_04335 b104ed0718dc3f49b50855d8062e2e69 220 Pfam PF06912 Protein of unknown function (DUF1275) 13 207 2.2E-28 T 11-10-2018 IPR010699 Protein of unknown function DUF1275 VSVS12_02646 9248f5ba2369bbf6d5388ab232fd91c7 243 SUPERFAMILY SSF63892 4 242 1.44E-101 T 11-10-2018 IPR036130 Pyridoxine 5'-phosphate synthase GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 VSVS12_02646 9248f5ba2369bbf6d5388ab232fd91c7 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 132.181 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 VSVS12_02646 9248f5ba2369bbf6d5388ab232fd91c7 243 Gene3D G3DSA:3.20.20.70 1 243 1.4E-108 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_02646 9248f5ba2369bbf6d5388ab232fd91c7 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 239 1.1E-99 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 VSVS12_02646 9248f5ba2369bbf6d5388ab232fd91c7 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 1.9E-105 T 11-10-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 VSVS12_03118 ea005b8bc71264c220d203707ac51719 376 Pfam PF13265 Protein of unknown function (DUF4056) 45 305 1.9E-108 T 11-10-2018 IPR025130 Protein of unknown function DUF4056 VSVS12_03173 a896cb2a7c90adbd16f0c6c04bfa0991 70 Pfam PF00196 Bacterial regulatory proteins, luxR family 4 58 5.8E-22 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_03173 a896cb2a7c90adbd16f0c6c04bfa0991 70 SMART SM00421 2 59 5.9E-21 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_03173 a896cb2a7c90adbd16f0c6c04bfa0991 70 SUPERFAMILY SSF46894 2 59 2.69E-20 T 11-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 VSVS12_03173 a896cb2a7c90adbd16f0c6c04bfa0991 70 Gene3D G3DSA:1.10.10.10 1 61 1.6E-22 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_03173 a896cb2a7c90adbd16f0c6c04bfa0991 70 ProSitePatterns PS00622 LuxR-type HTH domain signature. 19 46 - T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_03173 a896cb2a7c90adbd16f0c6c04bfa0991 70 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 35 47 3.2E-15 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_03173 a896cb2a7c90adbd16f0c6c04bfa0991 70 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 5 19 3.2E-15 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_03173 a896cb2a7c90adbd16f0c6c04bfa0991 70 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 19 35 3.2E-15 T 11-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 VSVS12_00025 7dd67a10b73854d4c9098596321e3e73 405 Gene3D G3DSA:1.20.1250.20 208 405 2.5E-10 T 11-10-2018 VSVS12_00025 7dd67a10b73854d4c9098596321e3e73 405 Pfam PF07690 Major Facilitator Superfamily 18 336 8.9E-19 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VSVS12_00025 7dd67a10b73854d4c9098596321e3e73 405 Gene3D G3DSA:1.20.1250.20 8 202 1.0E-13 T 11-10-2018 VSVS12_00025 7dd67a10b73854d4c9098596321e3e73 405 SUPERFAMILY SSF103473 9 399 1.24E-31 T 11-10-2018 IPR036259 MFS transporter superfamily VSVS12_04253 558184d1f7eaf870c756c984b793e39f 223 Pfam PF11769 Protein of unknown function (DUF3313) 15 213 5.4E-45 T 11-10-2018 IPR021747 Protein of unknown function DUF3313 VSVS12_00925 91243ef1259f52698e43620d5a79f935 365 Gene3D G3DSA:3.40.50.300 117 323 9.0E-74 T 11-10-2018 VSVS12_00925 91243ef1259f52698e43620d5a79f935 365 Pfam PF02562 PhoH-like protein 120 323 3.6E-95 T 11-10-2018 IPR003714 PhoH-like protein GO:0005524 VSVS12_00925 91243ef1259f52698e43620d5a79f935 365 SUPERFAMILY SSF52540 119 321 1.24E-40 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_03687 d8bbe703873b7904f4932e69dba8e47d 398 Pfam PF13343 Bacterial extracellular solute-binding protein 49 258 1.1E-19 T 11-10-2018 VSVS12_03687 d8bbe703873b7904f4932e69dba8e47d 398 SUPERFAMILY SSF53850 1 272 2.38E-31 T 11-10-2018 VSVS12_03687 d8bbe703873b7904f4932e69dba8e47d 398 Gene3D G3DSA:3.40.190.10 102 218 3.4E-28 T 11-10-2018 VSVS12_03687 d8bbe703873b7904f4932e69dba8e47d 398 Gene3D G3DSA:3.40.190.10 5 258 3.4E-28 T 11-10-2018 VSVS12_04529 64be4f7050bcfdd8031e77cf2f8533b2 137 Pfam PF12101 Protein of unknown function (DUF3577) 5 130 6.3E-33 T 11-10-2018 IPR021960 Protein of unknown function DUF3577 VSVS12_01717 eb07e2285d7a8f5cdf3fb23b390d8dea 781 SUPERFAMILY SSF52540 457 626 1.35E-8 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_01717 eb07e2285d7a8f5cdf3fb23b390d8dea 781 Pfam PF13401 AAA domain 471 584 3.8E-6 T 11-10-2018 IPR003593 AAA+ ATPase domain VSVS12_01717 eb07e2285d7a8f5cdf3fb23b390d8dea 781 Gene3D G3DSA:3.40.50.300 454 599 2.6E-8 T 11-10-2018 VSVS12_03938 dce55e9c58529fc54f928e874a5a56bf 192 Gene3D G3DSA:1.10.3820.10 10 188 1.4E-32 T 11-10-2018 IPR038266 NapC/NirT cytochrome c superfamily VSVS12_03938 dce55e9c58529fc54f928e874a5a56bf 192 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 15 185 1.6E-69 T 11-10-2018 IPR005126 NapC/NirT cytochrome c, N-terminal VSVS12_03938 dce55e9c58529fc54f928e874a5a56bf 192 PIRSF PIRSF000013 1 192 6.5E-91 T 11-10-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 VSVS12_03938 dce55e9c58529fc54f928e874a5a56bf 192 SUPERFAMILY SSF48695 16 191 2.97E-55 T 11-10-2018 IPR036280 Multiheme cytochrome superfamily VSVS12_01102 63108ca279c426155764dec4dfe3a888 369 Gene3D G3DSA:1.10.1040.10 204 357 2.1E-37 T 11-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 VSVS12_01102 63108ca279c426155764dec4dfe3a888 369 Gene3D G3DSA:3.40.50.720 2 203 2.3E-48 T 11-10-2018 VSVS12_01102 63108ca279c426155764dec4dfe3a888 369 Pfam PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain 194 338 5.1E-29 T 11-10-2018 IPR003421 Opine dehydrogenase GO:0016491|GO:0050662|GO:0055114 VSVS12_01102 63108ca279c426155764dec4dfe3a888 369 SUPERFAMILY SSF48179 196 368 5.78E-41 T 11-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 VSVS12_01102 63108ca279c426155764dec4dfe3a888 369 SUPERFAMILY SSF51735 4 187 5.69E-14 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_00159 0b03ee387b1f50b58892d1dba3cc4016 254 Pfam PF05690 Thiazole biosynthesis protein ThiG 3 247 2.5E-109 T 11-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 VSVS12_00159 0b03ee387b1f50b58892d1dba3cc4016 254 Gene3D G3DSA:3.20.20.70 1 253 5.8E-110 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_00159 0b03ee387b1f50b58892d1dba3cc4016 254 SUPERFAMILY SSF110399 1 235 8.11E-85 T 11-10-2018 VSVS12_00159 0b03ee387b1f50b58892d1dba3cc4016 254 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 42.486 T 11-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 VSVS12_00968 6c35caf39deae5fdfeb9d211060a636a 141 Pfam PF05130 FlgN protein 2 130 5.6E-24 T 11-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 VSVS12_00968 6c35caf39deae5fdfeb9d211060a636a 141 SUPERFAMILY SSF140566 1 112 3.4E-22 T 11-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 VSVS12_00968 6c35caf39deae5fdfeb9d211060a636a 141 Gene3D G3DSA:1.20.58.300 2 111 7.0E-6 T 11-10-2018 VSVS12_01640 a05949d8eca06d1b5ac0852f47793b3f 435 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 23 430 4.6E-117 T 11-10-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0015562|GO:0019867|GO:0055085 VSVS12_01640 a05949d8eca06d1b5ac0852f47793b3f 435 Pfam PF02321 Outer membrane efflux protein 25 211 4.2E-24 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VSVS12_01640 a05949d8eca06d1b5ac0852f47793b3f 435 Pfam PF02321 Outer membrane efflux protein 233 415 1.7E-27 T 11-10-2018 IPR003423 Outer membrane efflux protein GO:0015562|GO:0055085 VSVS12_01640 a05949d8eca06d1b5ac0852f47793b3f 435 SUPERFAMILY SSF56954 24 429 3.4E-84 T 11-10-2018 VSVS12_01640 a05949d8eca06d1b5ac0852f47793b3f 435 Gene3D G3DSA:1.20.1600.10 23 426 7.4E-81 T 11-10-2018 VSVS12_02184 76ea7239937b242097b4dad32812cf51 267 Pfam PF02698 DUF218 domain 80 242 1.2E-26 T 11-10-2018 IPR003848 Domain of unknown function DUF218 VSVS12_04277 518bf603b0ede1e2c08fb0bc2dd43308 170 Pfam PF01467 Cytidylyltransferase-like 6 141 7.1E-8 T 11-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 VSVS12_04277 518bf603b0ede1e2c08fb0bc2dd43308 170 SUPERFAMILY SSF52374 1 170 4.69E-25 T 11-10-2018 VSVS12_04277 518bf603b0ede1e2c08fb0bc2dd43308 170 Gene3D G3DSA:3.40.50.620 1 170 5.1E-42 T 11-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold VSVS12_03539 c4b2eadb45df0789f92a4dc4e5d486e5 153 Gene3D G3DSA:1.10.357.10 1 153 3.6E-63 T 11-10-2018 VSVS12_03539 c4b2eadb45df0789f92a4dc4e5d486e5 153 SUPERFAMILY SSF46689 1 74 1.95E-11 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_01410 8e29df0a80e7f45d3bab1d64667be014 418 SUPERFAMILY SSF118215 13 401 8.76E-107 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VSVS12_01410 8e29df0a80e7f45d3bab1d64667be014 418 PRINTS PR00173 Glutamate-aspartate symporter signature 145 167 5.5E-53 T 11-10-2018 VSVS12_01410 8e29df0a80e7f45d3bab1d64667be014 418 PRINTS PR00173 Glutamate-aspartate symporter signature 356 376 5.5E-53 T 11-10-2018 VSVS12_01410 8e29df0a80e7f45d3bab1d64667be014 418 PRINTS PR00173 Glutamate-aspartate symporter signature 228 247 5.5E-53 T 11-10-2018 VSVS12_01410 8e29df0a80e7f45d3bab1d64667be014 418 PRINTS PR00173 Glutamate-aspartate symporter signature 330 349 5.5E-53 T 11-10-2018 VSVS12_01410 8e29df0a80e7f45d3bab1d64667be014 418 PRINTS PR00173 Glutamate-aspartate symporter signature 193 212 5.5E-53 T 11-10-2018 VSVS12_01410 8e29df0a80e7f45d3bab1d64667be014 418 PRINTS PR00173 Glutamate-aspartate symporter signature 295 321 5.5E-53 T 11-10-2018 VSVS12_01410 8e29df0a80e7f45d3bab1d64667be014 418 PRINTS PR00173 Glutamate-aspartate symporter signature 46 66 5.5E-53 T 11-10-2018 VSVS12_01410 8e29df0a80e7f45d3bab1d64667be014 418 PRINTS PR00173 Glutamate-aspartate symporter signature 76 101 5.5E-53 T 11-10-2018 VSVS12_01410 8e29df0a80e7f45d3bab1d64667be014 418 PRINTS PR00173 Glutamate-aspartate symporter signature 5 25 5.5E-53 T 11-10-2018 VSVS12_01410 8e29df0a80e7f45d3bab1d64667be014 418 Pfam PF00375 Sodium:dicarboxylate symporter family 13 401 2.9E-116 T 11-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 VSVS12_01410 8e29df0a80e7f45d3bab1d64667be014 418 Gene3D G3DSA:1.10.3860.10 2 417 7.7E-114 T 11-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 VSVS12_01152 07ce87e10611b453017aa9a4b10f12d8 295 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 39 295 1.0E-80 T 11-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 VSVS12_03259 6ae6e6f4bf9fe3b8f327ee8a7b1c0c96 122 Pfam PF13316 Protein of unknown function (DUF4087) 18 116 1.2E-29 T 11-10-2018 IPR025145 Protein of unknown function DUF4087 VSVS12_02726 ef8e298c3e5295652c27ffc45b2aae92 443 Pfam PF00263 Bacterial type II and III secretion system protein 271 432 5.9E-15 T 11-10-2018 IPR004846 Type II/III secretion system GO:0009306 VSVS12_01093 651b1c16f1a4d12b35fc66d16dc30855 450 Pfam PF03611 PTS system sugar-specific permease component 7 403 2.4E-139 T 11-10-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 VSVS12_01899 07568f15330269a31698196b638fcb0a 180 Pfam PF07700 Haem-NO-binding 2 162 4.4E-36 T 11-10-2018 IPR011644 Heme NO-binding GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 VSVS12_01899 07568f15330269a31698196b638fcb0a 180 Gene3D G3DSA:3.90.1520.10 1 179 2.2E-52 T 11-10-2018 IPR038158 H-NOX domain superfamily GO:0020037 KEGG: 00230+4.6.1.2|Reactome: R-HSA-392154 VSVS12_01899 07568f15330269a31698196b638fcb0a 180 SUPERFAMILY SSF111126 1 176 6.28E-46 T 11-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily VSVS12_02909 93d82345621958416e37784d7396c596 154 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 131 1.8E-42 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 VSVS12_02909 93d82345621958416e37784d7396c596 154 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 139 6.0E-53 T 11-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 VSVS12_02909 93d82345621958416e37784d7396c596 154 Gene3D G3DSA:3.40.50.300 2 153 9.8E-49 T 11-10-2018 VSVS12_02909 93d82345621958416e37784d7396c596 154 SUPERFAMILY SSF52540 26 152 5.97E-25 T 11-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase VSVS12_00319 fa88bbd619b884990f8a1399c890d592 456 Pfam PF00860 Permease family 32 410 2.0E-18 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 VSVS12_03230 150c83ac022049542a335047dbec7bfe 330 SUPERFAMILY SSF69279 39 184 1.42E-9 T 11-10-2018 VSVS12_00772 b081f4fe9247b70cb4f6260344a16bb9 357 Gene3D G3DSA:3.20.20.70 3 348 4.2E-157 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_00772 b081f4fe9247b70cb4f6260344a16bb9 357 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 9 346 1.4E-162 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VSVS12_00772 b081f4fe9247b70cb4f6260344a16bb9 357 Pfam PF00793 DAHP synthetase I family 42 340 2.7E-104 T 11-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 VSVS12_00772 b081f4fe9247b70cb4f6260344a16bb9 357 PIRSF PIRSF001361 1 353 1.1E-162 T 11-10-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 VSVS12_00772 b081f4fe9247b70cb4f6260344a16bb9 357 SUPERFAMILY SSF51569 8 345 1.65E-138 T 11-10-2018 VSVS12_00237 f71a3cde85ade22765c8a7a9d415f36a 455 SUPERFAMILY SSF56349 185 338 9.42E-19 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VSVS12_00237 f71a3cde85ade22765c8a7a9d415f36a 455 Gene3D G3DSA:1.10.443.10 189 395 2.0E-16 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VSVS12_00237 f71a3cde85ade22765c8a7a9d415f36a 455 Pfam PF00589 Phage integrase family 208 336 1.0E-11 T 11-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 VSVS12_04332 24295cabfc82a1815202b29a6b211ee3 99 Gene3D G3DSA:2.60.40.10 5 99 6.7E-15 T 11-10-2018 IPR013783 Immunoglobulin-like fold VSVS12_04332 24295cabfc82a1815202b29a6b211ee3 99 SUPERFAMILY SSF81296 11 95 7.93E-13 T 11-10-2018 IPR014756 Immunoglobulin E-set VSVS12_02300 198944ace6285a095bae4f19202f02e7 145 Pfam PF02050 Flagellar FliJ protein 18 140 3.9E-29 T 11-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 VSVS12_02300 198944ace6285a095bae4f19202f02e7 145 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 3 142 4.7E-33 T 11-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 VSVS12_01358 5e64ee1177ec16b5e70d43196e6a81d0 255 Pfam PF10972 Peptidoglycan-binding protein, CsiV 4 254 1.4E-63 T 11-10-2018 IPR021241 Peptidoglycan-binding protein, CsiV VSVS12_03882 c5e94403a850bf00d6bdfec5082326de 186 PIRSF PIRSF028063 2 171 4.6E-21 T 11-10-2018 IPR014538 Uncharacterised conserved protein, topoisomerase zinc finger VSVS12_03882 c5e94403a850bf00d6bdfec5082326de 186 Pfam PF10881 Protein of unknown function (DUF2726) 46 167 3.8E-32 T 11-10-2018 IPR024402 Domain of unknown function DUF2726 VSVS12_03412 1ea958f22ddb687981e7250f9f996441 129 Pfam PF11042 Protein of unknown function (DUF2750) 24 121 3.0E-30 T 11-10-2018 IPR021284 Protein of unknown function DUF2750 VSVS12_01618 be235b68b2341b10352ee311e772c4cc 409 Pfam PF01566 Natural resistance-associated macrophage protein 54 376 4.9E-19 T 11-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 VSVS12_02482 6ff427877fae746994f25e30e2b8a52e 84 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 11-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site VSVS12_02482 6ff427877fae746994f25e30e2b8a52e 84 SUPERFAMILY SSF54862 4 64 1.01E-16 T 11-10-2018 VSVS12_02482 6ff427877fae746994f25e30e2b8a52e 84 Gene3D G3DSA:3.30.70.20 2 83 5.3E-34 T 11-10-2018 VSVS12_02482 6ff427877fae746994f25e30e2b8a52e 84 Pfam PF00037 4Fe-4S binding domain 5 25 6.6E-6 T 11-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain VSVS12_02334 6e1d8608d389746e4b2037b2c9b89ab4 181 Pfam PF07348 Syd protein (SUKH-2) 7 179 3.9E-69 T 11-10-2018 IPR009948 Syd GO:0009898 VSVS12_02334 6e1d8608d389746e4b2037b2c9b89ab4 181 Gene3D G3DSA:3.40.1580.20 1 181 6.4E-68 T 11-10-2018 IPR038228 Syd superfamily VSVS12_02334 6e1d8608d389746e4b2037b2c9b89ab4 181 Hamap MF_01104 Protein Syd [syd]. 3 181 36.194 T 11-10-2018 IPR009948 Syd GO:0009898 VSVS12_01094 8a5b14dbba58546f19223247199d7761 88 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 82 2.1E-16 T 11-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 VSVS12_01094 8a5b14dbba58546f19223247199d7761 88 Gene3D G3DSA:3.40.50.2300 1 86 9.8E-23 T 11-10-2018 VSVS12_01094 8a5b14dbba58546f19223247199d7761 88 SUPERFAMILY SSF52794 1 86 2.07E-21 T 11-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 VSVS12_02269 40628547e03730297be4459e12aef6f3 271 Gene3D G3DSA:1.10.3470.10 38 269 5.8E-8 T 11-10-2018 IPR037294 ABC transporter, BtuC-like VSVS12_02269 40628547e03730297be4459e12aef6f3 271 Pfam PF00950 ABC 3 transport family 11 266 9.1E-77 T 11-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 VSVS12_02269 40628547e03730297be4459e12aef6f3 271 SUPERFAMILY SSF81345 9 267 1.7E-40 T 11-10-2018 IPR037294 ABC transporter, BtuC-like VSVS12_03229 e738bfc5372eea103723af83231a0997 74 Pfam PF05489 Phage Tail Protein X 4 63 1.9E-6 T 11-10-2018 IPR008861 Phage Tail Protein X-like VSVS12_03229 e738bfc5372eea103723af83231a0997 74 Gene3D G3DSA:3.10.350.10 1 73 3.1E-7 T 11-10-2018 IPR036779 LysM domain superfamily VSVS12_02341 0c5e394beee0fd18761c8bb12ea19be9 363 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 357 83.273 T 11-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 VSVS12_02341 0c5e394beee0fd18761c8bb12ea19be9 363 Gene3D G3DSA:3.30.2300.20 80 177 9.2E-39 T 11-10-2018 VSVS12_02341 0c5e394beee0fd18761c8bb12ea19be9 363 Gene3D G3DSA:3.40.50.150 178 358 4.1E-53 T 11-10-2018 VSVS12_02341 0c5e394beee0fd18761c8bb12ea19be9 363 PIRSF PIRSF028774 1 362 3.1E-188 T 11-10-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 VSVS12_02341 0c5e394beee0fd18761c8bb12ea19be9 363 SUPERFAMILY SSF53335 186 281 1.66E-10 T 11-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase VSVS12_02341 0c5e394beee0fd18761c8bb12ea19be9 363 Gene3D G3DSA:3.30.70.2810 1 79 2.7E-32 T 11-10-2018 VSVS12_02341 0c5e394beee0fd18761c8bb12ea19be9 363 Pfam PF01728 FtsJ-like methyltransferase 188 281 2.0E-5 T 11-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 VSVS12_03771 81459a2d8f8f51037529ca37fe63476b 205 PIRSF PIRSF020606 1 204 6.9E-79 T 11-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 VSVS12_03771 81459a2d8f8f51037529ca37fe63476b 205 Pfam PF09997 Predicted membrane protein (DUF2238) 43 180 2.5E-49 T 11-10-2018 IPR014509 Uncharacterised conserved protein UCP020606 VSVS12_03664 065312bee2c183ab91dab294c84c753e 121 SUPERFAMILY SSF50729 15 119 3.98E-32 T 11-10-2018 VSVS12_03664 065312bee2c183ab91dab294c84c753e 121 Gene3D G3DSA:2.30.29.50 6 121 3.0E-38 T 11-10-2018 IPR037063 Bacterial Pleckstrin homology domain superfamily VSVS12_03664 065312bee2c183ab91dab294c84c753e 121 Pfam PF08000 Bacterial PH domain 16 119 1.4E-34 T 11-10-2018 IPR012544 Bacterial Pleckstrin homology domain VSVS12_03290 5c866fd5820aa45816690225c2687934 277 SUPERFAMILY SSF52768 77 248 5.4E-13 T 11-10-2018 IPR023696 Ureohydrolase domain superfamily VSVS12_03290 5c866fd5820aa45816690225c2687934 277 Gene3D G3DSA:3.40.800.10 88 215 3.4E-6 T 11-10-2018 VSVS12_01079 bbd1406f19f6a94afa7079240b205d4d 220 SUPERFAMILY SSF51735 2 194 1.38E-21 T 11-10-2018 IPR036291 NAD(P)-binding domain superfamily VSVS12_01079 bbd1406f19f6a94afa7079240b205d4d 220 Pfam PF00106 short chain dehydrogenase 7 185 1.3E-16 T 11-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR VSVS12_01079 bbd1406f19f6a94afa7079240b205d4d 220 Gene3D G3DSA:3.40.50.720 1 217 1.1E-19 T 11-10-2018 VSVS12_04585 fc0b6600cf41423c69ebfc3b56540c1b 98 SUPERFAMILY SSF53041 3 37 1.96E-5 T 11-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 VSVS12_04585 fc0b6600cf41423c69ebfc3b56540c1b 98 Pfam PF00239 Resolvase, N terminal domain 3 36 4.5E-5 T 11-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 VSVS12_02774 c9531cc266d4f5cde55be1bbf7308629 264 Pfam PF01578 Cytochrome C assembly protein 38 262 2.7E-41 T 11-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 VSVS12_01293 36ffe475097377842e47eec0cfdfcb9e 307 Pfam PF03601 Conserved hypothetical protein 698 26 288 1.4E-53 T 11-10-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 VSVS12_02144 c51c430188d7a334ed3d61639bfb0e68 227 TIGRFAM TIGR02796 tolQ: protein TolQ 6 220 9.2E-93 T 11-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 VSVS12_02144 c51c430188d7a334ed3d61639bfb0e68 227 Pfam PF01618 MotA/TolQ/ExbB proton channel family 80 207 5.5E-43 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VSVS12_02144 c51c430188d7a334ed3d61639bfb0e68 227 Hamap MF_02202 Tol-Pal system protein TolQ [tolQ]. 5 225 43.774 T 11-10-2018 IPR014163 Tol-Pal system, TolQ GO:0016021|GO:0043213 VSVS12_01776 85bedab228fac52ec0e8dabfd2321551 497 Pfam PF13440 Polysaccharide biosynthesis protein 68 278 1.4E-10 T 11-10-2018 VSVS12_04158 ac6261b60de984b8c82f56cfe267fc31 188 Pfam PF01810 LysE type translocator 1 185 1.2E-32 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VSVS12_02509 99966910749809239f75970085853e05 183 Pfam PF16964 Putative tight adherence pilin protein F 5 183 6.1E-46 T 11-10-2018 IPR031582 Putative tight adherence pilin protein F VSVS12_01638 e22f326e5e4742d9494759df7b575812 116 Pfam PF11042 Protein of unknown function (DUF2750) 13 113 1.8E-32 T 11-10-2018 IPR021284 Protein of unknown function DUF2750 VSVS12_02806 b36fe8ecae01afdf1db48d7146d5d445 812 Pfam PF16967 E-set like domain 285 348 9.4E-10 T 11-10-2018 IPR032636 Pilus assembly protein, E-set like domain VSVS12_03110 1fde5ea4d033e178c49f19e01b19b2dd 182 SUPERFAMILY SSF55729 4 141 4.15E-18 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_03110 1fde5ea4d033e178c49f19e01b19b2dd 182 Pfam PF13673 Acetyltransferase (GNAT) domain 43 142 6.6E-8 T 11-10-2018 IPR000182 GNAT domain VSVS12_03110 1fde5ea4d033e178c49f19e01b19b2dd 182 Gene3D G3DSA:3.40.630.30 8 180 2.7E-24 T 11-10-2018 VSVS12_04430 2a3430a6f3925cf21b0b01d10097a4de 216 Pfam PF14348 Domain of unknown function (DUF4400) 104 213 5.4E-14 T 11-10-2018 IPR022266 Integrating conjugative element protein, PFL4697-type VSVS12_00406 07cba75bab0fa7a87abbaf5e23ac7228 735 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 30 721 2.3E-261 T 11-10-2018 IPR010344 Exopolysaccharide biosynthesis protein YbjH VSVS12_03590 d4b3658245b09798c54212b0975ea1f6 182 SUPERFAMILY SSF55729 1 153 4.48E-13 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_03590 d4b3658245b09798c54212b0975ea1f6 182 Gene3D G3DSA:3.40.630.30 1 158 4.5E-11 T 11-10-2018 VSVS12_02967 c8d52bc254020d0e9a542b87c5af3a96 435 PIRSF PIRSF004539 1 435 1.1E-176 T 11-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VSVS12_02967 c8d52bc254020d0e9a542b87c5af3a96 435 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 433 6.2E-180 T 11-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VSVS12_02967 c8d52bc254020d0e9a542b87c5af3a96 435 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 367 2.8E-144 T 11-10-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 VSVS12_02372 ca92743cd655667175c505928743efc7 250 Pfam PF08907 Domain of unknown function (DUF1853) 29 212 2.6E-38 T 11-10-2018 IPR015003 Protein of unknown function DUF1853 VSVS12_03500 720130182be88ceffab493f82e17517e 136 SUPERFAMILY SSF54593 3 130 6.05E-21 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VSVS12_03500 720130182be88ceffab493f82e17517e 136 Gene3D G3DSA:3.10.180.10 7 136 5.1E-23 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VSVS12_03500 720130182be88ceffab493f82e17517e 136 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 129 8.2E-10 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VSVS12_00820 a6bf838ce6ffb12c68762df8a7c4ad19 190 SMART SM00464 3 189 0.0022 T 11-10-2018 IPR003111 Lon, substrate-binding domain VSVS12_00820 a6bf838ce6ffb12c68762df8a7c4ad19 190 SUPERFAMILY SSF88697 3 187 3.73E-45 T 11-10-2018 IPR015947 PUA-like superfamily VSVS12_00820 a6bf838ce6ffb12c68762df8a7c4ad19 190 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 3 132 8.1E-14 T 11-10-2018 IPR003111 Lon, substrate-binding domain VSVS12_00820 a6bf838ce6ffb12c68762df8a7c4ad19 190 Gene3D G3DSA:2.30.130.40 1 110 1.4E-28 T 11-10-2018 VSVS12_01216 f895774c2e297f2c70713cfedb0f21d7 295 SUPERFAMILY SSF103481 188 282 9.42E-15 T 11-10-2018 VSVS12_01216 f895774c2e297f2c70713cfedb0f21d7 295 Pfam PF00892 EamA-like transporter family 6 137 1.1E-12 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VSVS12_01216 f895774c2e297f2c70713cfedb0f21d7 295 Pfam PF00892 EamA-like transporter family 148 279 2.5E-16 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VSVS12_01216 f895774c2e297f2c70713cfedb0f21d7 295 SUPERFAMILY SSF103481 40 141 6.67E-11 T 11-10-2018 VSVS12_03903 dca0fe83adbcf0a573dbc97c42c119d4 114 Pfam PF11782 Protein of unknown function (DUF3319) 5 79 1.2E-29 T 11-10-2018 IPR021753 Protein of unknown function DUF3319 VSVS12_04245 07ae8365344b045609c1af52bc060d1b 301 Pfam PF06166 Protein of unknown function (DUF979) 3 301 1.1E-114 T 11-10-2018 IPR009323 Protein of unknown function DUF979 VSVS12_00613 824e3bcaacdb1bee86c9642d34156c71 481 Pfam PF01523 Putative modulator of DNA gyrase 35 332 3.3E-64 T 11-10-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 VSVS12_00613 824e3bcaacdb1bee86c9642d34156c71 481 Gene3D G3DSA:3.30.2290.10 9 240 1.3E-13 T 11-10-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal VSVS12_00613 824e3bcaacdb1bee86c9642d34156c71 481 SUPERFAMILY SSF111283 18 480 4.19E-127 T 11-10-2018 IPR036059 Metalloprotease TldD/PmbA superfamily GO:0006508|GO:0008237 VSVS12_00613 824e3bcaacdb1bee86c9642d34156c71 481 PIRSF PIRSF004919 15 481 2.7E-141 T 11-10-2018 IPR025502 TldD VSVS12_03870 8aa59d1b54c4a925a262b5b659a93773 326 Pfam PF11557 Solitary outer membrane autotransporter beta-barrel domain 9 325 2.1E-121 T 11-10-2018 IPR021621 Solitary outer membrane autotransporter beta-barrel domain VSVS12_03660 8a068a35f6ea7d774e2d4086d493a304 161 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 147 1.4E-14 T 11-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain VSVS12_03660 8a068a35f6ea7d774e2d4086d493a304 161 SUPERFAMILY SSF54593 1 150 1.15E-26 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VSVS12_03660 8a068a35f6ea7d774e2d4086d493a304 161 Gene3D G3DSA:3.10.180.10 1 150 3.9E-24 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VSVS12_03660 8a068a35f6ea7d774e2d4086d493a304 161 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 11-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 VSVS12_03371 613febda763bc8ff210d87fc4d254d85 182 Pfam PF11188 Protein of unknown function (DUF2975) 70 182 7.0E-15 T 11-10-2018 IPR021354 Protein of unknown function DUF2975 VSVS12_04272 02afc9912ba811c85c582350a86a6add 408 SUPERFAMILY SSF103473 13 395 6.02E-58 T 11-10-2018 IPR036259 MFS transporter superfamily VSVS12_04272 02afc9912ba811c85c582350a86a6add 408 Gene3D G3DSA:1.20.1720.10 23 398 1.7E-85 T 11-10-2018 VSVS12_04272 02afc9912ba811c85c582350a86a6add 408 Pfam PF07690 Major Facilitator Superfamily 34 203 3.7E-33 T 11-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 VSVS12_00755 1a7f79ff3ea8f8394f1f8535386fe238 382 Pfam PF02690 Na+/Pi-cotransporter 218 326 1.6E-18 T 11-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 VSVS12_00755 1a7f79ff3ea8f8394f1f8535386fe238 382 Pfam PF02690 Na+/Pi-cotransporter 30 148 5.4E-22 T 11-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 VSVS12_03769 e089e188a11ec1edabf1ec82128232ff 68 SUPERFAMILY SSF57783 9 48 3.34E-5 T 11-10-2018 VSVS12_01908 6b5cc11b59ca22ae9c7ba38d959d6aea 397 Pfam PF01610 Transposase 149 388 2.8E-64 T 11-10-2018 IPR002560 Transposase IS204/IS1001/IS1096/IS1165, DDE domain VSVS12_01908 6b5cc11b59ca22ae9c7ba38d959d6aea 397 Pfam PF13542 Helix-turn-helix domain of transposase family ISL3 84 130 3.1E-11 T 11-10-2018 IPR032877 Transposase IS204/IS1001/IS1096/IS1165, helix-turn-helix domain VSVS12_02349 27bf54aa8c017b2728f69d5112da46c8 253 Pfam PF01618 MotA/TolQ/ExbB proton channel family 99 213 8.8E-23 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VSVS12_02349 27bf54aa8c017b2728f69d5112da46c8 253 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 182 199 - T 11-10-2018 IPR000540 Flagellar motor protein MotA, conserved site VSVS12_01782 e130db2d6180ec3326ddfc8b8d9e8f6e 479 Pfam PF02706 Chain length determinant protein 8 93 9.2E-6 T 11-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 VSVS12_01782 e130db2d6180ec3326ddfc8b8d9e8f6e 479 Pfam PF13807 G-rich domain on putative tyrosine kinase 362 443 3.6E-8 T 11-10-2018 IPR032807 Tyrosine kinase, G-rich domain VSVS12_01628 df938affe3bbaf2dc8de0e8400cebd3d 382 Pfam PF12698 ABC-2 family transporter protein 20 363 2.9E-39 T 11-10-2018 VSVS12_01151 b16ef96c6f717c846ca43db4e4adabb1 256 Pfam PF03609 PTS system sorbose-specific iic component 3 233 1.6E-68 T 11-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 VSVS12_01652 0cec1e97a6e1ee91ac0a8607d88ac9c9 342 SUPERFAMILY SSF53850 29 258 3.3E-48 T 11-10-2018 VSVS12_01652 0cec1e97a6e1ee91ac0a8607d88ac9c9 342 Gene3D G3DSA:3.40.190.10 28 257 4.4E-50 T 11-10-2018 VSVS12_01652 0cec1e97a6e1ee91ac0a8607d88ac9c9 342 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 39 257 4.6E-28 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VSVS12_01652 0cec1e97a6e1ee91ac0a8607d88ac9c9 342 SMART SM00062 38 267 3.6E-52 T 11-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF VSVS12_01652 0cec1e97a6e1ee91ac0a8607d88ac9c9 342 Gene3D G3DSA:3.40.190.10 130 225 4.4E-50 T 11-10-2018 VSVS12_02970 5a3d223181f1c7881f704ebc69067369 208 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 2 202 6.5E-40 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VSVS12_02970 5a3d223181f1c7881f704ebc69067369 208 Pfam PF01914 MarC family integral membrane protein 3 204 2.1E-44 T 11-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 VSVS12_04080 afadcef78356ab9fae9e853e506521c4 138 Gene3D G3DSA:1.10.150.130 9 114 3.0E-7 T 11-10-2018 IPR010998 Integrase/recombinase, N-terminal VSVS12_00020 7f56c616de4663b0770a439958c2ff3d 74 Pfam PF10678 Protein of unknown function (DUF2492) 3 74 1.9E-22 T 11-10-2018 IPR019620 Putative metal-binding protein VSVS12_00020 7f56c616de4663b0770a439958c2ff3d 74 TIGRFAM TIGR03853 matur_matur: putative metal-binding protein 4 74 8.9E-24 T 11-10-2018 IPR019620 Putative metal-binding protein VSVS12_02462 76fe02dcc9c5366d9845b9d00e9d0db8 324 Pfam PF03595 Voltage-dependent anion channel 19 307 2.2E-30 T 11-10-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 VSVS12_02462 76fe02dcc9c5366d9845b9d00e9d0db8 324 Gene3D G3DSA:1.50.10.150 5 318 1.8E-44 T 11-10-2018 IPR038665 Voltage-dependent anion channel superfamily VSVS12_01881 ccd7798362bba98710bbc1e4b2c38a98 165 Pfam PF05951 Bacterial protein of unknown function (DUF882) 19 164 5.5E-66 T 11-10-2018 IPR010275 Protein of unknown function DUF882 VSVS12_01881 ccd7798362bba98710bbc1e4b2c38a98 165 SUPERFAMILY SSF55166 38 165 4.45E-34 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VSVS12_01881 ccd7798362bba98710bbc1e4b2c38a98 165 Gene3D G3DSA:3.30.1380.10 57 165 1.3E-13 T 11-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 VSVS12_03487 9b633b726aea9169fd07d40c74f6de86 160 Pfam PF11012 Protein of unknown function (DUF2850) 52 131 3.0E-28 T 11-10-2018 IPR021271 Protein of unknown function DUF2850 VSVS12_02498 dc4facc5444eb8f32da7f4332efb7fec 330 Pfam PF14057 GGGtGRT protein 7 324 1.4E-172 T 11-10-2018 IPR025964 GGGtGRT protein VSVS12_02092 9ceaf546b85b520e6f36226e31aa4277 54 Pfam PF10689 Protein of unknown function (DUF2496) 8 49 9.6E-25 T 11-10-2018 IPR019630 Protein of unknown function DUF2496, YbaM-related VSVS12_02876 76121183ae8599d4237a64628986a7fd 166 Pfam PF11736 Protein of unknown function (DUF3299) 31 161 1.6E-44 T 11-10-2018 IPR021727 Protein of unknown function DUF3299 VSVS12_02876 76121183ae8599d4237a64628986a7fd 166 Gene3D G3DSA:2.40.50.870 25 166 4.2E-47 T 11-10-2018 VSVS12_03754 5577e91d4f1cd4ce885f12b6661ee65d 525 TIGRFAM TIGR03369 cellulose_bcsE: cellulose biosynthesis protein BcsE 160 479 2.0E-95 T 11-10-2018 IPR017745 BcsE, GIL domain GO:0035438 VSVS12_03754 5577e91d4f1cd4ce885f12b6661ee65d 525 Pfam PF10995 GGDEF I-site like or GIL domain 166 479 7.7E-99 T 11-10-2018 IPR017745 BcsE, GIL domain GO:0035438 VSVS12_00021 7570bc2926f71fa52886b2eb967900e3 207 Pfam PF07947 YhhN family 27 204 1.5E-27 T 11-10-2018 IPR012506 YhhN-like GO:0016021 VSVS12_02074 dee93258941436aa6c74949a1e430179 168 Pfam PF11086 Protein of unknown function (DUF2878) 8 154 8.3E-28 T 11-10-2018 IPR021306 Protein of unknown function DUF2878 VSVS12_01532 c859d6677eb98abec5de30ed69529038 113 Pfam PF04320 Protein with unknown function (DUF469) 11 111 2.6E-30 T 11-10-2018 IPR007416 Protein of unknown function DUF469 VSVS12_02626 e79d60ea5755c58bd990cf25d23c0efa 127 Pfam PF11697 Protein of unknown function (DUF3293) 28 97 2.7E-15 T 11-10-2018 IPR021710 Protein of unknown function DUF3293 VSVS12_01614 40f104729b4499011889c2f666e983dd 191 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 19 82 1.7E-9 T 11-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 VSVS12_02740 7ade319d4ac3e8589d153f0b149c657a 203 SUPERFAMILY SSF53955 19 166 4.85E-22 T 11-10-2018 IPR023346 Lysozyme-like domain superfamily VSVS12_02740 7ade319d4ac3e8589d153f0b149c657a 203 Gene3D G3DSA:1.10.530.10 39 201 1.2E-13 T 11-10-2018 VSVS12_01017 877f91fa9d451ebdec2c46b143782c27 421 Pfam PF09839 Uncharacterized protein conserved in bacteria (DUF2066) 18 249 1.2E-65 T 11-10-2018 IPR018642 Protein of unknown function DUF2066 VSVS12_04225 69d473f9deb3a36dc77a4385f0851612 78 Pfam PF11137 Protein of unknown function (DUF2909) 5 71 4.5E-18 T 11-10-2018 IPR021313 Protein of unknown function DUF2909 VSVS12_02464 1517efac1cfbc05c04fb79ecfa8d6027 102 Gene3D G3DSA:1.10.10.710 21 100 5.9E-7 T 11-10-2018 IPR038627 YebG-like superfamily VSVS12_02464 1517efac1cfbc05c04fb79ecfa8d6027 102 Pfam PF07130 YebG protein 1 72 1.1E-30 T 11-10-2018 IPR009813 Uncharacterised protein family YebG VSVS12_02121 43f6f42bba01c627c92c03995cead24f 172 Pfam PF01618 MotA/TolQ/ExbB proton channel family 46 155 5.4E-20 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VSVS12_04076 9b9fe97257b2f1aef84b9d877f15120a 60 Gene3D G3DSA:2.170.150.70 5 60 9.6E-14 T 11-10-2018 VSVS12_04076 9b9fe97257b2f1aef84b9d877f15120a 60 SUPERFAMILY SSF51316 1 55 1.57E-15 T 11-10-2018 IPR011057 Mss4-like superfamily VSVS12_03926 25d7ba2f0cc38f3f4e5980ce09a1723c 179 Pfam PF01292 Prokaryotic cytochrome b561 8 176 1.2E-30 T 11-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 VSVS12_03926 25d7ba2f0cc38f3f4e5980ce09a1723c 179 SUPERFAMILY SSF81342 5 175 4.79E-36 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 VSVS12_03536 54e8991bec2454f7d91dacd6dd7bc117 367 SUPERFAMILY SSF69593 44 244 6.67E-10 T 11-10-2018 VSVS12_03536 54e8991bec2454f7d91dacd6dd7bc117 367 Pfam PF01553 Acyltransferase 92 240 3.3E-10 T 11-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 VSVS12_04531 057cf35fc7eb6c7e196949d6ade7fc99 241 Pfam PF03553 Na+/H+ antiporter family 23 235 2.8E-36 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VSVS12_00944 0ca382045e7037afe65ebfa2a20f9a1c 248 Pfam PF07556 Protein of unknown function (DUF1538) 25 246 7.6E-72 T 11-10-2018 IPR011435 Protein of unknown function DUF1538 VSVS12_02605 6955f8533576f4343a8b69a3ab3d33da 167 Pfam PF13527 Acetyltransferase (GNAT) domain 3 124 4.7E-13 T 11-10-2018 VSVS12_02605 6955f8533576f4343a8b69a3ab3d33da 167 SUPERFAMILY SSF55729 1 130 7.15E-28 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_02605 6955f8533576f4343a8b69a3ab3d33da 167 Gene3D G3DSA:3.40.630.30 1 167 1.6E-47 T 11-10-2018 VSVS12_03450 fcd501b936a3e6c6660a73af777d6a1b 39 Gene3D G3DSA:2.30.130.30 3 39 6.7E-9 T 11-10-2018 VSVS12_03450 fcd501b936a3e6c6660a73af777d6a1b 39 SUPERFAMILY SSF88697 6 39 5.47E-5 T 11-10-2018 IPR015947 PUA-like superfamily VSVS12_01377 fad8359b092b74b2b90a36d2b8a8b290 331 Pfam PF09982 Uncharacterized protein conserved in bacteria (DUF2219) 34 328 6.7E-81 T 11-10-2018 IPR018707 Protein of unknown function DUF2219 VSVS12_01377 fad8359b092b74b2b90a36d2b8a8b290 331 Gene3D G3DSA:2.40.128.140 27 330 3.8E-51 T 11-10-2018 IPR037107 Putative outer membrane protein superfamily VSVS12_04051 15bba069b05df4d21e6b79611634caae 121 Pfam PF04892 VanZ like family 40 110 2.0E-7 T 11-10-2018 IPR006976 VanZ-like VSVS12_02207 45d60493a55c099ca24c43f517dbb427 95 Pfam PF07023 Protein of unknown function (DUF1315) 4 84 3.5E-29 T 11-10-2018 IPR009749 Protein of unknown function DUF1315 VSVS12_03922 e7b2525ec6c8ad6302432c0cfcaca55f 162 Pfam PF06496 Protein of unknown function (DUF1097) 9 141 5.5E-37 T 11-10-2018 IPR009476 Protein of unknown function DUF1097 VSVS12_01688 bc12474438eb54ef7a3e435ca308f6ca 53 TIGRFAM TIGR00847 ccoS: cytochrome oxidase maturation protein, cbb3-type 1 48 5.3E-17 T 11-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type VSVS12_01688 bc12474438eb54ef7a3e435ca308f6ca 53 Pfam PF03597 Cytochrome oxidase maturation protein cbb3-type 2 45 1.4E-21 T 11-10-2018 IPR004714 Cytochrome oxidase maturation protein cbb3-type VSVS12_03225 e06ddffe4485d4a004644ee7986fbbfd 180 Pfam PF11985 Protein of unknown function (DUF3486) 28 145 3.1E-6 T 11-10-2018 IPR021874 Bacteriophage Mu, Gp27 VSVS12_02134 101074c3dbfbd32ea3a9e24c058bdf3f 149 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 2 145 31.446 T 11-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 VSVS12_02134 101074c3dbfbd32ea3a9e24c058bdf3f 149 Pfam PF06610 L-alanine exporter 8 142 1.6E-66 T 11-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 VSVS12_02134 101074c3dbfbd32ea3a9e24c058bdf3f 149 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 15 142 8.0E-60 T 11-10-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 VSVS12_02116 ac40f3f618b5b20c5de65543544bae28 105 Pfam PF13992 YecR-like lipoprotein 30 103 5.4E-18 T 11-10-2018 IPR025731 YecR-like lipoprotein VSVS12_04103 c43c848fb8195bdfe257f7ed7fd86395 372 Pfam PF16966 Porin-like glycoporin RafY 45 370 8.4E-96 T 11-10-2018 IPR016963 Glycoporin RafY VSVS12_04103 c43c848fb8195bdfe257f7ed7fd86395 372 SUPERFAMILY SSF56935 27 341 1.07E-11 T 11-10-2018 VSVS12_03691 a5ff2892d4618f0906dea2df98ab150d 785 Pfam PF06934 Fatty acid cis/trans isomerase (CTI) 102 784 3.4E-290 T 11-10-2018 IPR010706 Fatty acid cis-trans isomerase VSVS12_03097 5202e0b20eaf32b7daeb5eeaf22cabeb 97 Pfam PF03083 Sugar efflux transporter for intercellular exchange 17 85 1.9E-4 T 11-10-2018 IPR004316 SWEET sugar transporter GO:0016021 Reactome: R-HSA-189200 VSVS12_03097 5202e0b20eaf32b7daeb5eeaf22cabeb 97 Gene3D G3DSA:1.20.1280.290 1 97 2.3E-43 T 11-10-2018 VSVS12_03332 54defb94ce4480ee854e92d364541003 215 SUPERFAMILY SSF46689 2 67 6.45E-12 T 11-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 VSVS12_03332 54defb94ce4480ee854e92d364541003 215 Gene3D G3DSA:3.40.50.10490 65 215 8.3E-17 T 11-10-2018 VSVS12_03332 54defb94ce4480ee854e92d364541003 215 SUPERFAMILY SSF53697 80 201 3.93E-18 T 11-10-2018 VSVS12_03332 54defb94ce4480ee854e92d364541003 215 Pfam PF01418 Helix-turn-helix domain, rpiR family 8 66 4.7E-10 T 11-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 VSVS12_03332 54defb94ce4480ee854e92d364541003 215 Gene3D G3DSA:1.10.10.10 1 64 8.8E-13 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_04474 9064d321a03194376c1cec4c1870e857 167 Gene3D G3DSA:1.10.3210.40 38 162 1.2E-13 T 11-10-2018 VSVS12_04474 9064d321a03194376c1cec4c1870e857 167 Pfam PF07514 Putative helicase 33 153 1.7E-27 T 11-10-2018 IPR011119 Uncharacterised domain, helicase/relaxase, putative VSVS12_02609 86178dc5add834f27c3bbbfa4308e54e 291 Pfam PF01136 Peptidase family U32 85 210 1.1E-11 T 11-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 VSVS12_00393 dbd3581627a13ad75703de1038e55c1f 182 Pfam PF02397 Bacterial sugar transferase 3 173 1.0E-47 T 11-10-2018 IPR003362 Bacterial sugar transferase VSVS12_01599 c04e48bed73d12d0e016dea068b929d7 139 Pfam PF03788 LrgA family 38 129 3.8E-26 T 11-10-2018 IPR005538 LrgA/CidA family GO:0016021 VSVS12_01239 3fdd5efcf4a208c11d6ef6bf5e9dc2cd 317 Gene3D G3DSA:3.40.47.10 1 317 3.4E-125 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 VSVS12_01239 3fdd5efcf4a208c11d6ef6bf5e9dc2cd 317 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 228 316 1.7E-34 T 11-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VSVS12_01239 3fdd5efcf4a208c11d6ef6bf5e9dc2cd 317 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 317 72.304 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VSVS12_01239 3fdd5efcf4a208c11d6ef6bf5e9dc2cd 317 SUPERFAMILY SSF53901 3 316 2.26E-70 T 11-10-2018 IPR016039 Thiolase-like GO:0003824 VSVS12_01239 3fdd5efcf4a208c11d6ef6bf5e9dc2cd 317 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 7.1E-31 T 11-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VSVS12_01239 3fdd5efcf4a208c11d6ef6bf5e9dc2cd 317 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 317 4.8E-143 T 11-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 VSVS12_03212 31cc1461fe183a4c02ce35d2531fdb04 429 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 136 248 1.1E-12 T 11-10-2018 IPR006528 Phage head morphogenesis domain VSVS12_03212 31cc1461fe183a4c02ce35d2531fdb04 429 Pfam PF04233 Phage Mu protein F like protein 134 246 5.2E-15 T 11-10-2018 IPR006528 Phage head morphogenesis domain VSVS12_03878 bdabfc9981fee527a2ef7eb907b8891b 292 Pfam PF11060 Protein of unknown function (DUF2861) 24 287 5.9E-87 T 11-10-2018 IPR021290 Protein of unknown function DUF2861 VSVS12_04524 438602ff6e2ca4554d64bd3dacb7c1be 244 Gene3D G3DSA:2.60.120.200 19 241 1.1E-8 T 11-10-2018 VSVS12_04524 438602ff6e2ca4554d64bd3dacb7c1be 244 SUPERFAMILY SSF49899 2 238 1.74E-5 T 11-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily VSVS12_03471 f044cebe5b0d0288bc37b06addcd5e16 109 Gene3D G3DSA:3.90.1210.30 2 90 9.7E-22 T 11-10-2018 VSVS12_00894 b5768ff511b8208f30314f6c3ed1c61d 192 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 34 187 5.3E-82 T 11-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 VSVS12_00894 b5768ff511b8208f30314f6c3ed1c61d 192 SUPERFAMILY SSF53697 1 190 5.56E-52 T 11-10-2018 VSVS12_00894 b5768ff511b8208f30314f6c3ed1c61d 192 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 37.566 T 11-10-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 VSVS12_00894 b5768ff511b8208f30314f6c3ed1c61d 192 Gene3D G3DSA:3.40.50.10490 1 192 7.3E-71 T 11-10-2018 VSVS12_00894 b5768ff511b8208f30314f6c3ed1c61d 192 Pfam PF13580 SIS domain 25 146 1.9E-30 T 11-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 VSVS12_03066 11269653c2db02807d1a1c8f0921c404 155 Pfam PF07670 Nucleoside recognition 31 124 5.7E-7 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VSVS12_04494 7c89407475e06815ef0980ec368183d7 402 Pfam PF00872 Transposase, Mutator family 10 377 2.7E-122 T 11-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 VSVS12_04494 7c89407475e06815ef0980ec368183d7 402 ProSitePatterns PS01007 Transposases, Mutator family, signature. 232 256 - T 11-10-2018 IPR001207 Transposase, mutator type GO:0003677|GO:0004803|GO:0006313 VSVS12_01543 cb1c53845a6e5c9b19000882fbd2ea7f 66 Pfam PF14056 Domain of unknown function (DUF4250) 10 61 1.7E-18 T 11-10-2018 IPR025346 Protein of unknown function DUF4250 VSVS12_02875 708ae2178f969522c1006d254c963cde 247 Pfam PF02687 FtsX-like permease family 145 238 1.3E-11 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VSVS12_04289 071a53198dbec93fca94e6abf0e04bda 205 Pfam PF01810 LysE type translocator 15 202 1.1E-24 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VSVS12_04289 071a53198dbec93fca94e6abf0e04bda 205 PIRSF PIRSF006324 1 204 2.7E-49 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VSVS12_01644 fcd6c12f4fa1817cb9d9508fd10e1777 467 Gene3D G3DSA:1.10.287.950 139 466 2.1E-62 T 11-10-2018 VSVS12_01644 fcd6c12f4fa1817cb9d9508fd10e1777 467 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 252 431 8.5E-38 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_01644 fcd6c12f4fa1817cb9d9508fd10e1777 467 SMART SM00283 205 466 1.3E-60 T 11-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 VSVS12_01644 fcd6c12f4fa1817cb9d9508fd10e1777 467 SUPERFAMILY SSF58104 161 465 8.89E-65 T 11-10-2018 VSVS12_04223 3550838c7415a882308b937315e77c7d 182 SUPERFAMILY SSF52833 61 163 1.46E-5 T 11-10-2018 IPR036249 Thioredoxin-like superfamily VSVS12_02197 14258f0791c86a01759a21bbef405d46 149 Pfam PF05433 Glycine zipper 2TM domain 57 89 3.7E-9 T 11-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 VSVS12_01923 5e67ab7880a3e226c0309f1dec8a5275 276 Pfam PF10977 Protein of unknown function (DUF2797) 38 270 4.3E-95 T 11-10-2018 IPR021246 Protein of unknown function DUF2797 VSVS12_03265 57f67189df04a15e4b99af2e84f8b075 113 SUPERFAMILY SSF89957 11 90 4.19E-21 T 11-10-2018 IPR029756 MTH1187/YkoF-like VSVS12_03265 57f67189df04a15e4b99af2e84f8b075 113 Gene3D G3DSA:3.30.70.930 4 107 1.2E-31 T 11-10-2018 IPR029756 MTH1187/YkoF-like VSVS12_03265 57f67189df04a15e4b99af2e84f8b075 113 Pfam PF01910 Thiamine-binding protein 13 92 1.5E-23 T 11-10-2018 IPR002767 Thiamine-binding protein VSVS12_01588 11db545049834edc3c06c257eedab744 247 Pfam PF07070 SpoOM protein 2 215 4.0E-59 T 11-10-2018 IPR009776 Sporulation stage 0, protein M VSVS12_01370 b4cbb28a9fd8718b3840b5552cf172e0 512 Pfam PF04293 SpoVR like protein 19 449 4.5E-176 T 11-10-2018 IPR007390 Sporulation stage V, protein R VSVS12_01459 3f956a0788e9b52634074defea015afb 112 Pfam PF02656 Domain of unknown function (DUF202) 10 78 1.4E-14 T 11-10-2018 IPR003807 Domain of unknown function DUF202 VSVS12_03557 e3346eaf4c83141ddb7b84f5d4bce16d 495 Pfam PF11329 Protein of unknown function (DUF3131) 120 474 5.5E-86 T 11-10-2018 IPR021478 Protein of unknown function DUF3131 VSVS12_00752 c3f4120e249c7020d34bfa5b09ad792b 263 Pfam PF01925 Sulfite exporter TauE/SafE 10 260 1.7E-47 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VSVS12_03445 634eb5592e86b9bcbf267b27e82d9839 291 Pfam PF03547 Membrane transport protein 149 284 6.8E-8 T 11-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 VSVS12_01525 5eb84fa64ca7511c9bfd5174d93d1873 268 Pfam PF07007 Lysozyme inhibitor LprI 25 86 7.5E-8 T 11-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal VSVS12_00835 3c0c934159d35d0d8b311478315bc698 77 Pfam PF04400 (Na+)-NQR maturation NqrM 22 63 3.5E-21 T 11-10-2018 IPR007495 (Na+)-NQR maturation factor NqrM VSVS12_03189 9e950fdd9f80b25e668e02400dd05fa2 656 Pfam PF11826 Protein of unknown function (DUF3346) 290 514 1.2E-141 T 11-10-2018 IPR021781 Protein of unknown function DUF3346 VSVS12_00321 11ac913ddd789a2a892e086b799464c6 287 Pfam PF08543 Phosphomethylpyrimidine kinase 90 256 1.4E-16 T 11-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 VSVS12_00321 11ac913ddd789a2a892e086b799464c6 287 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 285 1.4E-96 T 11-10-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 VSVS12_00321 11ac913ddd789a2a892e086b799464c6 287 SUPERFAMILY SSF53613 2 271 1.06E-64 T 11-10-2018 IPR029056 Ribokinase-like VSVS12_00321 11ac913ddd789a2a892e086b799464c6 287 Gene3D G3DSA:3.40.1190.20 1 287 1.3E-79 T 11-10-2018 IPR029056 Ribokinase-like VSVS12_04606 dbfa89947cead2429502dd46f73af80e 77 Gene3D G3DSA:1.10.10.10 9 70 2.0E-7 T 11-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily VSVS12_00945 8f43963cb0d607d0608e08a1fc8b983b 261 Pfam PF07556 Protein of unknown function (DUF1538) 19 244 4.0E-71 T 11-10-2018 IPR011435 Protein of unknown function DUF1538 VSVS12_01802 bd55fea58ee80365936cb8328de8ec1f 186 Pfam PF01618 MotA/TolQ/ExbB proton channel family 75 175 1.1E-21 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VSVS12_03021 4595733021c58537533da47aeb2c4728 294 Pfam PF04018 Domain of unknown function (DUF368) 1 245 4.7E-97 T 11-10-2018 IPR007163 Protein of unknown function DUF368 VSVS12_00966 1b49414c30554a0c6b7500b3e5954b4f 211 PIRSF PIRSF028688 1 211 2.8E-117 T 11-10-2018 IPR014549 Flagellar protein FlgO VSVS12_04445 bb2514dbc2422678a5515ffa441bd863 419 TIGRFAM TIGR03755 conj_TIGR03755: integrating conjugative element protein, PFL_4711 family 25 397 1.5E-93 T 11-10-2018 IPR021204 Integrating conjugative element protein, PFL4711 VSVS12_01016 80d29bdcb9c2a32bdb408fd4b43a2386 412 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 3 394 1.5E-111 T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 VSVS12_01016 80d29bdcb9c2a32bdb408fd4b43a2386 412 Pfam PF00860 Permease family 3 370 4.5E-92 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 VSVS12_01016 80d29bdcb9c2a32bdb408fd4b43a2386 412 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 318 338 - T 11-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 VSVS12_01732 28ed02b455ba6da1b3b4e40edd6ee2c2 170 SUPERFAMILY SSF54001 41 165 1.03E-38 T 11-10-2018 IPR038765 Papain-like cysteine peptidase superfamily VSVS12_01732 28ed02b455ba6da1b3b4e40edd6ee2c2 170 Gene3D G3DSA:3.90.1720.10 43 167 1.3E-39 T 11-10-2018 VSVS12_01732 28ed02b455ba6da1b3b4e40edd6ee2c2 170 Pfam PF00877 NlpC/P60 family 59 163 1.3E-30 T 11-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain VSVS12_04148 98a1cde00b5f3d9f97c52599afcd7119 305 Pfam PF01882 Protein of unknown function DUF58 52 136 2.1E-21 T 11-10-2018 IPR002881 Domain of unknown function DUF58 VSVS12_01959 c9368a610e264b53673e0ef58479f1c9 422 Pfam PF11335 Protein of unknown function (DUF3137) 301 398 1.8E-6 T 11-10-2018 IPR021484 Protein of unknown function DUF3137 VSVS12_04544 d4e892005777e223f79a76c68eec52b2 74 SUPERFAMILY SSF51658 4 45 7.6E-8 T 11-10-2018 IPR036237 Xylose isomerase-like superfamily VSVS12_04544 d4e892005777e223f79a76c68eec52b2 74 Gene3D G3DSA:3.20.20.150 3 68 5.9E-7 T 11-10-2018 VSVS12_04470 5a8c4dfceb1f636d9f8bdafce6b10e6a 326 Gene3D G3DSA:1.10.10.2830 154 269 1.2E-7 T 11-10-2018 VSVS12_02318 ba8dd90b3e8907fcd22e74356bc593a1 157 Gene3D G3DSA:1.10.8.640 32 116 8.9E-33 T 11-10-2018 IPR038297 CcmH/CycL/Ccl2/NrfF domain superfamily VSVS12_02318 ba8dd90b3e8907fcd22e74356bc593a1 157 TIGRFAM TIGR03147 cyt_nit_nrfF: cytochrome c nitrite reductase, accessory protein NrfF 23 138 6.0E-50 T 11-10-2018 IPR017565 Formate-dependent nitrite reductase complex, subunit NrfF VSVS12_02318 ba8dd90b3e8907fcd22e74356bc593a1 157 Pfam PF03918 Cytochrome C biogenesis protein 31 148 2.4E-42 T 11-10-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family VSVS12_01744 88a8b39842a06cfcd9afcdc43d0d25ae 269 Pfam PF02631 RecX family 42 157 5.3E-16 T 11-10-2018 IPR003783 Regulatory protein RecX GO:0006282 VSVS12_01744 88a8b39842a06cfcd9afcdc43d0d25ae 269 Pfam PF02631 RecX family 185 266 2.1E-10 T 11-10-2018 IPR003783 Regulatory protein RecX GO:0006282 VSVS12_03600 9409333b8133f3da25ab2e752e1b658b 92 SUPERFAMILY SSF54534 5 89 2.49E-25 T 11-10-2018 VSVS12_03600 9409333b8133f3da25ab2e752e1b658b 92 Pfam PF13616 PPIC-type PPIASE domain 13 89 4.0E-23 T 11-10-2018 VSVS12_03600 9409333b8133f3da25ab2e752e1b658b 92 Gene3D G3DSA:3.10.50.40 2 92 2.3E-33 T 11-10-2018 VSVS12_02317 5488cb67ece6776581e565a6ff83e273 154 Pfam PF11143 Protein of unknown function (DUF2919) 3 146 9.6E-50 T 11-10-2018 IPR021318 Protein of unknown function DUF2919 VSVS12_01978 3507f005b2e6ef1b1ee088c846041698 151 PIRSF PIRSF028065 5 151 3.5E-69 T 11-10-2018 IPR016865 Inner membrane protein RclC VSVS12_01978 3507f005b2e6ef1b1ee088c846041698 151 Pfam PF04224 Protein of unknown function, DUF417 14 149 2.1E-41 T 11-10-2018 IPR007339 Inner membrane protein RclC-like VSVS12_01439 dff362a698669d01edcb19a17b81d353 333 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 165 1.7E-26 T 11-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase VSVS12_01018 d9ceeb6c2f7ef826e22178864e11ab3a 152 Pfam PF09842 Predicted membrane protein (DUF2069) 27 129 3.1E-34 T 11-10-2018 IPR018643 Protein of unknown function DUF2069, membrane VSVS12_02549 786384b94897d715cffb1cdcec961044 224 Pfam PF01925 Sulfite exporter TauE/SafE 2 210 6.7E-36 T 11-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 VSVS12_04268 c4923144d5d62607e8e254cd24a3be85 295 Pfam PF00892 EamA-like transporter family 153 284 2.6E-11 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VSVS12_04268 c4923144d5d62607e8e254cd24a3be85 295 Pfam PF00892 EamA-like transporter family 10 144 5.6E-8 T 11-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 VSVS12_04268 c4923144d5d62607e8e254cd24a3be85 295 SUPERFAMILY SSF103481 189 288 5.62E-10 T 11-10-2018 VSVS12_04268 c4923144d5d62607e8e254cd24a3be85 295 SUPERFAMILY SSF103481 47 146 4.58E-8 T 11-10-2018 VSVS12_02405 861a26627eada893af8a35bbb1cec764 519 Pfam PF03806 AbgT putative transporter family 19 517 8.2E-209 T 11-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 VSVS12_04057 16d864fc6b6aba4b71cdb671ccf27726 139 Pfam PF10711 Hypothetical protein (DUF2513) 2 111 2.0E-17 T 11-10-2018 IPR019650 Protein of unknown function DUF2513 VSVS12_02542 d053fcd9b16d50a329d999f01eb53d4b 60 Pfam PF12065 Protein of unknown function (DUF3545) 1 58 3.4E-22 T 11-10-2018 IPR021932 Protein of unknown function DUF3545 VSVS12_03381 563f7fea7c81ee1bb6c0fc2ca591d78a 187 Pfam PF01292 Prokaryotic cytochrome b561 19 179 3.2E-9 T 11-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 VSVS12_01894 1055e6d11ed45109b3682c0c295dc88e 458 Pfam PF04317 YcjX-like family, DUF463 20 457 1.2E-187 T 11-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein VSVS12_01894 1055e6d11ed45109b3682c0c295dc88e 458 PIRSF PIRSF019381 1 458 1.1E-200 T 11-10-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein VSVS12_02312 950dfa46db89d9549631da6314810471 142 Gene3D G3DSA:3.30.160.170 39 132 3.9E-15 T 11-10-2018 IPR035924 FlaG-like superfamily VSVS12_02312 950dfa46db89d9549631da6314810471 142 Pfam PF03646 FlaG protein 47 141 5.9E-24 T 11-10-2018 IPR005186 FlaG protein VSVS12_02312 950dfa46db89d9549631da6314810471 142 SUPERFAMILY SSF160214 54 141 1.7E-23 T 11-10-2018 IPR035924 FlaG-like superfamily VSVS12_01891 ef37c127e13a3d9ccd2d65cfe1449eae 194 Gene3D G3DSA:3.40.630.30 13 190 9.5E-49 T 11-10-2018 VSVS12_01891 ef37c127e13a3d9ccd2d65cfe1449eae 194 SUPERFAMILY SSF55729 14 185 1.4E-41 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_01891 ef37c127e13a3d9ccd2d65cfe1449eae 194 Pfam PF13302 Acetyltransferase (GNAT) domain 17 161 7.5E-19 T 11-10-2018 IPR000182 GNAT domain VSVS12_02823 6885ac899cc9b5ca7cc571a6477f7e72 459 Pfam PF00860 Permease family 38 419 2.3E-70 T 11-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 VSVS12_03806 d648c5aadebc94ac44969f273082951a 112 Gene3D G3DSA:3.20.160.10 1 112 8.9E-50 T 11-10-2018 IPR038604 Type III effector HopJ superfamily VSVS12_03806 d648c5aadebc94ac44969f273082951a 112 Pfam PF08888 HopJ type III effector protein 3 109 2.5E-49 T 11-10-2018 IPR014984 HopJ type III effector protein VSVS12_00967 34e6c605de47e76e52caad7e0945cbe0 143 Pfam PF02169 LPP20 lipoprotein 27 118 3.8E-7 T 11-10-2018 IPR024952 Lipoprotein LPP20-like VSVS12_00967 34e6c605de47e76e52caad7e0945cbe0 143 PIRSF PIRSF028687 1 143 1.2E-58 T 11-10-2018 IPR007293 Flagellar protein FlgP VSVS12_01730 0d306b186f617d8d3a4959bc358ef05f 262 Pfam PF04116 Fatty acid hydroxylase superfamily 88 224 1.9E-27 T 11-10-2018 IPR006694 Fatty acid hydroxylase GO:0005506|GO:0008610|GO:0016491|GO:0055114 VSVS12_00346 a9075bd6a6b8c67528c6e659f304aced 251 SUPERFAMILY SSF51366 1 250 7.06E-64 T 11-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 VSVS12_00346 a9075bd6a6b8c67528c6e659f304aced 251 Pfam PF00977 Histidine biosynthesis protein 5 231 2.4E-62 T 11-10-2018 IPR006062 Histidine biosynthesis GO:0000105 VSVS12_00346 a9075bd6a6b8c67528c6e659f304aced 251 Gene3D G3DSA:3.20.20.70 1 251 2.5E-87 T 11-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 VSVS12_01752 c6e4a96d2b626c0f73cc0ab69f42320a 979 SUPERFAMILY SSF53649 393 667 7.85E-10 T 11-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 VSVS12_01752 c6e4a96d2b626c0f73cc0ab69f42320a 979 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 392 664 1.3E-10 T 11-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 VSVS12_02208 3f79cf9870cdf377b23d1ada8f5e59f6 271 Pfam PF11207 Protein of unknown function (DUF2989) 16 217 2.0E-68 T 11-10-2018 IPR021372 Protein of unknown function DUF2989 VSVS12_03641 ea4d40c130e5a3216391ab5917dea01c 178 SUPERFAMILY SSF81342 8 174 3.45E-28 T 11-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 VSVS12_03641 ea4d40c130e5a3216391ab5917dea01c 178 Pfam PF01292 Prokaryotic cytochrome b561 9 174 7.8E-24 T 11-10-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 VSVS12_03295 c35c8a837c547bdc50e19564f255fc13 357 Pfam PF03773 Predicted permease 10 353 4.9E-60 T 11-10-2018 IPR005524 Predicted permease DUF318 VSVS12_03363 4d80136bc3ea1cba4e2a4c06bedca78e 204 Pfam PF03458 UPF0126 domain 5 79 2.7E-15 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 VSVS12_03363 4d80136bc3ea1cba4e2a4c06bedca78e 204 Pfam PF03458 UPF0126 domain 93 165 5.8E-16 T 11-10-2018 IPR005115 Uncharacterised domain UPF0126 VSVS12_02148 f3b36f0255ff90f4328600678f050dba 378 PIRSF PIRSF000267 2 377 6.9E-120 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VSVS12_02148 f3b36f0255ff90f4328600678f050dba 378 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 378 6.4E-169 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VSVS12_02148 f3b36f0255ff90f4328600678f050dba 378 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 361 7.8E-106 T 11-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 VSVS12_01443 74bce4931e32f62a4bb6d8979ec5c961 502 Pfam PF11840 Protein of unknown function (DUF3360) 17 498 3.8E-270 T 11-10-2018 IPR021794 Protein of unknown function DUF3360 VSVS12_03621 a9a5f930866d85d289d6c8e118f07fe3 135 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 12 109 8.0E-35 T 11-10-2018 IPR020483 Uncharacterised protein family YgbA VSVS12_03621 a9a5f930866d85d289d6c8e118f07fe3 135 Pfam PF11756 Nitrous oxide-stimulated promoter 13 119 8.5E-45 T 11-10-2018 IPR020483 Uncharacterised protein family YgbA VSVS12_03144 d8fbd25877459bf4f10d9c2f7cc69692 169 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 22 148 1.4E-25 T 11-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ VSVS12_00284 ce9017cd5311f653d7795a73be035b55 639 Pfam PF05170 AsmA family 3 572 5.4E-95 T 11-10-2018 IPR007844 AsmA VSVS12_01406 763597061a129c96e228013d454d5e76 441 Pfam PF06629 MltA-interacting protein MipA 52 244 1.3E-18 T 11-10-2018 IPR010583 MltA-interacting MipA VSVS12_04041 2f80dc6d275078f75fec5108432177b1 168 SUPERFAMILY SSF55729 15 168 1.55E-23 T 11-10-2018 IPR016181 Acyl-CoA N-acyltransferase VSVS12_04041 2f80dc6d275078f75fec5108432177b1 168 Gene3D G3DSA:3.40.630.30 2 168 1.4E-42 T 11-10-2018 VSVS12_04041 2f80dc6d275078f75fec5108432177b1 168 Pfam PF13673 Acetyltransferase (GNAT) domain 48 147 6.3E-10 T 11-10-2018 IPR000182 GNAT domain VSVS12_00344 e2e0df1733346058a9b9b40130557c5f 386 TIGRFAM TIGR03573 WbuX: N-acetyl sugar amidotransferase 5 352 7.6E-100 T 11-10-2018 IPR020022 N-acetyl sugar amidotransferase VSVS12_00344 e2e0df1733346058a9b9b40130557c5f 386 SUPERFAMILY SSF52402 18 174 1.85E-14 T 11-10-2018 VSVS12_03309 e2bad12d5786eb7e0f8e646670d2bdb3 86 Pfam PF16691 Domain of unknown function (DUF5062) 6 86 2.0E-31 T 11-10-2018 IPR032036 Protein of unknown function DUF5062 VSVS12_03309 e2bad12d5786eb7e0f8e646670d2bdb3 86 Gene3D G3DSA:1.20.120.1930 1 86 5.9E-39 T 11-10-2018 VSVS12_04008 194b8f6a55761c78f79b7a5bc27237fb 121 Gene3D G3DSA:3.10.180.10 6 121 6.4E-17 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VSVS12_04008 194b8f6a55761c78f79b7a5bc27237fb 121 SUPERFAMILY SSF54593 12 119 1.55E-23 T 11-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase VSVS12_00139 53d7a04346325fd6ef003bbfc8cdea3b 165 Pfam PF06114 IrrE N-terminal-like domain 62 160 2.6E-15 T 11-10-2018 IPR010359 IrrE N-terminal-like domain VSVS12_00139 53d7a04346325fd6ef003bbfc8cdea3b 165 Gene3D G3DSA:3.40.390.50 30 121 3.5E-10 T 11-10-2018 VSVS12_04456 882031fff796d0a5f2218d5b82eb6a9d 306 SUPERFAMILY SSF55874 123 184 1.72E-5 T 11-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily VSVS12_02539 6f065ed3d95b05af578295b77bae7c97 50 Pfam PF17320 Family of unknown function (DUF5363) 4 30 3.5E-6 T 11-10-2018 IPR035292 Protein of unknown function DUF5363 VSVS12_02503 ce6d186744c1f9c6ad74a8d1e816c239 447 Pfam PF01554 MatE 248 405 6.2E-18 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VSVS12_02503 ce6d186744c1f9c6ad74a8d1e816c239 447 Pfam PF01554 MatE 20 180 5.3E-24 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VSVS12_02503 ce6d186744c1f9c6ad74a8d1e816c239 447 TIGRFAM TIGR00797 matE: MATE efflux family protein 20 418 6.8E-54 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VSVS12_02503 ce6d186744c1f9c6ad74a8d1e816c239 447 PIRSF PIRSF006603 6 447 2.1E-61 T 11-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 VSVS12_02028 cc4a3f7ee6da7847bffa5cafc5cabd40 85 Pfam PF06945 Protein of unknown function (DUF1289) 11 56 5.7E-19 T 11-10-2018 IPR010710 Protein of unknown function DUF1289 VSVS12_02233 27bcd7b50a65543e4ba244c6e2e11256 243 Pfam PF11859 Protein of unknown function (DUF3379) 1 237 3.1E-83 T 11-10-2018 IPR021806 Protein of unknown function DUF3379 VSVS12_03248 2b6173ce91fe553907f1a4673ecf19b7 219 Pfam PF11363 Protein of unknown function (DUF3164) 25 218 5.4E-79 T 11-10-2018 IPR021505 Bacteriophage B3, Orf6 VSVS12_04439 ab0507e2543de7a2ec314093b9eaa815 211 Pfam PF11444 Protein of unknown function (DUF2895) 9 203 4.4E-74 T 11-10-2018 IPR021548 Protein of unknown function DUF2895 VSVS12_04439 ab0507e2543de7a2ec314093b9eaa815 211 TIGRFAM TIGR03746 conj_TIGR03746: integrating conjugative element protein, PFL_4703 family 6 206 6.5E-74 T 11-10-2018 IPR021548 Protein of unknown function DUF2895 VSVS12_04112 1cbe1cf4fe8446aab8798d8a442633ed 164 Pfam PF02371 Transposase IS116/IS110/IS902 family 38 114 4.4E-23 T 11-10-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 VSVS12_03993 c585213f6ceb9b18ad708c2f9a9dfc0a 71 Pfam PF03692 Putative zinc- or iron-chelating domain 20 56 1.4E-7 T 11-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein VSVS12_01445 a2dcde715b79aa09a503e43b3c7d7270 293 Gene3D G3DSA:1.20.1270.180 32 138 4.4E-6 T 11-10-2018 VSVS12_01445 a2dcde715b79aa09a503e43b3c7d7270 293 Pfam PF07007 Lysozyme inhibitor LprI 39 119 6.2E-7 T 11-10-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal VSVS12_02056 534ab2f741bf47325cc7e38e0c0bedd6 401 Pfam PF11449 Putative, 10TM heavy-metal exporter 40 399 5.0E-158 T 11-10-2018 IPR021552 Putative, 10TM heavy-metal exporter VSVS12_01615 04f70d70ea41f47b5034dcc9e7061ab3 188 Pfam PF07209 Protein of unknown function (DUF1415) 13 179 2.7E-62 T 11-10-2018 IPR009858 Protein of unknown function DUF1415 VSVS12_03182 af8eb7152c96f6830b885325e9cc83ae 356 Pfam PF11168 Protein of unknown function (DUF2955) 16 153 5.9E-21 T 11-10-2018 IPR022604 Protein of unknown function DUF2955 VSVS12_00341 098bc1b28bd0c050832138f840374895 330 Pfam PF07922 Glycosyltransferase family 52 69 296 1.7E-8 T 11-10-2018 IPR012477 Glycosyltransferase family 52 VSVS12_03679 b094ab97f58c01087c9fdb764520f084 238 Gene3D G3DSA:3.40.50.1360 1 238 2.2E-87 T 11-10-2018 VSVS12_03679 b094ab97f58c01087c9fdb764520f084 238 SUPERFAMILY SSF100950 3 237 1.15E-59 T 11-10-2018 IPR037171 NagB/RpiA transferase-like VSVS12_03679 b094ab97f58c01087c9fdb764520f084 238 TIGRFAM TIGR01198 pgl: 6-phosphogluconolactonase 10 236 4.2E-54 T 11-10-2018 IPR005900 6-phosphogluconolactonase, DevB-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 VSVS12_03679 b094ab97f58c01087c9fdb764520f084 238 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 10 227 1.2E-59 T 11-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 VSVS12_02408 15d0c39c5616082fca294fc64d5e6d01 212 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 20 40 - T 11-10-2018 IPR012902 Prokaryotic N-terminal methylation site VSVS12_03853 476abf7352403dc88f937dd59a33cf8f 208 Pfam PF07947 YhhN family 24 203 1.5E-43 T 11-10-2018 IPR012506 YhhN-like GO:0016021 VSVS12_00588 96965299956b2d66d60c20a8a84c75f6 216 Pfam PF04612 Type II secretion system (T2SS), protein M 10 72 4.4E-6 T 11-10-2018 IPR007690 Type II secretion system, protein M GO:0009306 VSVS12_04541 7c67c7bc19a3cd4068afe21bdd8cfc1b 79 Gene3D G3DSA:3.90.1150.10 1 73 1.1E-17 T 11-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 VSVS12_02820 f3b871afb894ecdcc4a8812a836657be 211 Pfam PF11726 Inovirus Gp2 25 202 1.4E-56 T 11-10-2018 VSVS12_01689 20109e99caac0fd4b7f3061e23132827 221 Pfam PF13386 Cytochrome C biogenesis protein transmembrane region 7 211 9.4E-54 T 11-10-2018 IPR039447 Urease accessory protein UreH-like, transmembrane domain VSVS12_03512 26eca7b31f7b8c16e83687914912ad08 382 Pfam PF13729 F plasmid transfer operon, TraF, protein 47 299 3.0E-65 T 11-10-2018 IPR032811 Putative conjugal transfer protein TraF-related VSVS12_03175 b9974791ce791e7515eaf2edb9eb4d21 259 Pfam PF14247 Putative metallopeptidase 31 253 7.1E-66 T 11-10-2018 IPR025644 Putative metallopeptidase VSVS12_03669 0cb4afd2616500976e281301832bde88 156 Pfam PF10517 Electron transfer DM13 60 155 9.5E-19 T 11-10-2018 IPR019545 DM13 domain VSVS12_02512 77a1b60c7fd50ee2785e5d6f1eb1d71e 300 Pfam PF00482 Type II secretion system (T2SS), protein F 163 290 2.9E-14 T 11-10-2018 IPR018076 Type II secretion system F domain VSVS12_00885 7c8d5b165c66141a07fe50d9abaacd7d 228 Pfam PF06930 Protein of unknown function (DUF1282) 14 223 2.2E-38 T 11-10-2018 IPR009698 Protein of unknown function DUF1282 VSVS12_01111 5b809a66fc7feb98707a829c47bb76f9 478 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 7 457 2.0E-159 T 11-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 VSVS12_01111 5b809a66fc7feb98707a829c47bb76f9 478 Pfam PF03553 Na+/H+ antiporter family 161 452 2.8E-61 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VSVS12_02965 e1d3b69c19f714385b8b1df0807f9dcd 176 Pfam PF04186 FxsA cytoplasmic membrane protein 7 114 5.4E-36 T 11-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 VSVS12_01388 512b19348593249e36946638fff06784 421 Pfam PF02687 FtsX-like permease family 314 408 2.8E-7 T 11-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 VSVS12_01388 512b19348593249e36946638fff06784 421 Pfam PF12704 MacB-like periplasmic core domain 27 254 3.7E-15 T 11-10-2018 IPR025857 MacB-like periplasmic core domain VSVS12_04436 47ba1024dd1243d4fac2c91ee3cc3a82 109 Pfam PF11990 Protein of unknown function (DUF3487) 6 109 7.2E-10 T 11-10-2018 IPR021877 Protein of unknown function DUF3487 VSVS12_00075 5461060d59cb5e3b47e4644a83e68116 86 Pfam PF10048 Predicted integral membrane protein (DUF2282) 33 82 7.3E-22 T 11-10-2018 IPR018740 Protein of unknown function DUF2282, integral membrane VSVS12_00698 aa0b1ce91dda9c107d5d4aa2f64b7f53 92 Pfam PF13467 Ribbon-helix-helix domain 16 83 1.0E-22 T 11-10-2018 IPR027373 Ribbon-helix-helix domain VSVS12_00698 aa0b1ce91dda9c107d5d4aa2f64b7f53 92 Gene3D G3DSA:1.10.3990.20 8 91 1.7E-29 T 11-10-2018 IPR038268 Ribbon-helix-helix domain superfamily VSVS12_01371 cc9476c8c5b0c649b1d7250caa2557fe 423 Pfam PF04285 Protein of unknown function (DUF444) 3 421 4.6E-185 T 11-10-2018 IPR006698 Uncharacterised protein family UPF0229 VSVS12_01371 cc9476c8c5b0c649b1d7250caa2557fe 423 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 423 39.823 T 11-10-2018 IPR006698 Uncharacterised protein family UPF0229 VSVS12_00690 371837c34bb4e1ba822615990675b382 421 Pfam PF02447 GntP family permease 9 414 9.3E-24 T 11-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 VSVS12_04462 24f2b522486e29bd5ac527778ef76315 187 Pfam PF11679 Protein of unknown function (DUF3275) 109 179 2.9E-7 T 11-10-2018 IPR021693 Protein of unknown function DUF3275 VSVS12_04462 24f2b522486e29bd5ac527778ef76315 187 Pfam PF11679 Protein of unknown function (DUF3275) 3 109 4.6E-29 T 11-10-2018 IPR021693 Protein of unknown function DUF3275 VSVS12_02107 ad355fd5e92b09a3c7b014c1a046548f 103 Pfam PF07383 Protein of unknown function (DUF1496) 42 93 4.5E-19 T 11-10-2018 IPR009971 Protein of unknown function DUF1496 VSVS12_01944 3a33b70c9d3f145faf23122c1dfd4092 164 Pfam PF14317 YcxB-like protein 99 154 1.3E-7 T 11-10-2018 IPR025588 YcxB-like protein VSVS12_02624 09092e1557aa2f615665bfe4248b56c4 150 PIRSF PIRSF028680 1 150 5.0E-54 T 11-10-2018 IPR016895 Uncharacterised conserved protein UCP028680 VSVS12_01777 4a091c81b4e886bc8065b3948f4cfe6b 466 Pfam PF04932 O-Antigen ligase 238 375 1.4E-18 T 11-10-2018 IPR007016 O-antigen ligase-related VSVS12_04372 08d9557b3dda1db8ce1bb0463a153257 278 Pfam PF02361 Cobalt transport protein 16 235 9.1E-31 T 11-10-2018 IPR003339 ABC/ECF transporter, transmembrane component VSVS12_03457 818ba9ca8d6a57ead1de0b70ace290ba 149 Pfam PF10990 Protein of unknown function (DUF2809) 52 134 4.2E-24 T 11-10-2018 IPR021257 Protein of unknown function DUF2809 VSVS12_03731 d88f882b41467031cec0e7b8d3b34f0b 739 SUPERFAMILY SSF56349 542 720 5.0E-11 T 11-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 VSVS12_03731 d88f882b41467031cec0e7b8d3b34f0b 739 Gene3D G3DSA:1.10.443.10 537 734 6.8E-8 T 11-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 VSVS12_02866 fb720ca5a55ef6a21e4e3a27d65c2963 1256 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 920 1255 3.1E-64 T 11-10-2018 IPR007452 Translocation and assembly module TamB VSVS12_04302 eefe16fa5d9101d377e918b1cdb6bfc3 279 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 5 277 7.5E-121 T 11-10-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 VSVS12_04302 eefe16fa5d9101d377e918b1cdb6bfc3 279 Pfam PF00756 Putative esterase 23 272 1.2E-60 T 11-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 VSVS12_04302 eefe16fa5d9101d377e918b1cdb6bfc3 279 SUPERFAMILY SSF53474 3 277 4.81E-89 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold VSVS12_04302 eefe16fa5d9101d377e918b1cdb6bfc3 279 Gene3D G3DSA:3.40.50.1820 3 278 2.3E-94 T 11-10-2018 IPR029058 Alpha/Beta hydrolase fold VSVS12_03997 82f642b245b2230e03589ba385b5a2c9 82 Pfam PF11730 Protein of unknown function (DUF3297) 11 81 2.2E-36 T 11-10-2018 IPR021724 Protein of unknown function DUF3297 VSVS12_01042 b8ebf58bdd65a595e7f6167e398777bd 117 Gene3D G3DSA:3.40.30.10 1 116 6.1E-35 T 11-10-2018 VSVS12_01042 b8ebf58bdd65a595e7f6167e398777bd 117 Pfam PF00578 AhpC/TSA family 7 114 1.1E-30 T 11-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 VSVS12_01042 b8ebf58bdd65a595e7f6167e398777bd 117 SUPERFAMILY SSF52833 1 114 1.75E-37 T 11-10-2018 IPR036249 Thioredoxin-like superfamily VSVS12_03203 e40ef496528e674dc7e8b51eb6ed8b12 401 SUPERFAMILY SSF53098 13 375 1.52E-65 T 11-10-2018 IPR012337 Ribonuclease H-like superfamily VSVS12_03203 e40ef496528e674dc7e8b51eb6ed8b12 401 Pfam PF01609 Transposase DDE domain 90 326 3.9E-26 T 11-10-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 VSVS12_04063 d91059156eb720ee240f45f1a1f2bf7e 169 PIRSF PIRSF031551 2 169 8.7E-55 T 11-10-2018 IPR012550 Protein of unknown function DUF1706 VSVS12_04063 d91059156eb720ee240f45f1a1f2bf7e 169 Pfam PF08020 Protein of unknown function (DUF1706) 4 166 5.4E-51 T 11-10-2018 IPR012550 Protein of unknown function DUF1706 VSVS12_04063 d91059156eb720ee240f45f1a1f2bf7e 169 Gene3D G3DSA:1.20.120.450 1 168 1.5E-51 T 11-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes VSVS12_04149 fcc041144bc2b916f692ecb3e7a8efcb 153 Pfam PF14316 Domain of unknown function (DUF4381) 11 143 4.5E-34 T 11-10-2018 IPR025489 Protein of unknown function (DUF4381 VSVS12_00957 4bb2c7621c8857addf0f7c80b5e819e6 147 Pfam PF04214 Protein of unknown function, DUF 48 117 5.5E-32 T 11-10-2018 IPR007332 Protein of unknown function DUF411 VSVS12_04441 19ff8c7999c9b84d7575492e96f4e4eb 466 TIGRFAM TIGR03752 conj_TIGR03752: integrating conjugative element protein, PFL_4705 family 5 454 2.8E-94 T 11-10-2018 IPR021207 Integrating conjugative element protein, PFL4705 VSVS12_01901 25a33baa7c59df0215b4b5b433515ac3 417 Pfam PF03222 Tryptophan/tyrosine permease family 28 414 3.7E-16 T 11-10-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 VSVS12_03067 cde5772626683d4d92ef3b63239e0188 241 Pfam PF07670 Nucleoside recognition 84 178 2.4E-10 T 11-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 VSVS12_02440 af7af7be957980184369e767d2a30c44 506 Pfam PF03553 Na+/H+ antiporter family 161 471 9.3E-52 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VSVS12_04359 e8fc2c43bbf854d72628e8c5941d09d7 195 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 11 187 2.3E-30 T 11-10-2018 IPR003740 Uncharacterised membrane protein YitT VSVS12_01693 b9948285eeb321393aa5bb084261fc0b 219 Pfam PF11205 Protein of unknown function (DUF2987) 22 166 2.5E-53 T 11-10-2018 IPR021370 Protein of unknown function DUF2987 VSVS12_01032 3728368c8b1d0cd440867d7acd2434fa 313 Pfam PF08843 Nucleotidyl transferase AbiEii toxin, Type IV TA system 37 300 5.3E-31 T 11-10-2018 IPR014942 Nucleotidyl transferase AbiEii toxin, Type IV TA system VSVS12_03237 bf770eb1dcc8af054b3fcbd553271bff 142 Pfam PF06252 Protein of unknown function (DUF1018) 26 140 3.3E-22 T 11-10-2018 IPR009363 Bacteriophage Mu, Gp16 VSVS12_03670 65e76557d6952725457eab8a667041d6 285 Pfam PF00924 Mechanosensitive ion channel 57 184 8.3E-16 T 11-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 VSVS12_03670 65e76557d6952725457eab8a667041d6 285 SUPERFAMILY SSF50182 96 169 5.23E-10 T 11-10-2018 IPR010920 LSM domain superfamily VSVS12_02161 d3c7a7002b9bfa5d8d207738bc4486c3 142 Pfam PF05232 Chlorhexidine efflux transporter 69 131 1.7E-21 T 11-10-2018 IPR007896 Chlorhexidine efflux transporter VSVS12_02161 d3c7a7002b9bfa5d8d207738bc4486c3 142 Pfam PF05232 Chlorhexidine efflux transporter 2 63 4.4E-24 T 11-10-2018 IPR007896 Chlorhexidine efflux transporter VSVS12_02992 dca4c3d48a1c40f8281e35f754d87a60 195 Gene3D G3DSA:1.20.1590.10 3 195 4.1E-67 T 11-10-2018 IPR023381 YP001051499.1-like domain superfamily VSVS12_02992 dca4c3d48a1c40f8281e35f754d87a60 195 Pfam PF04222 Protein of unknown function (DUF416) 6 193 1.1E-77 T 11-10-2018 IPR007338 Protein of unknown function DUF416 VSVS12_04143 ea50c2a48a34eb575d074865023b6f93 277 PIRSF PIRSF028200 1 277 6.6E-62 T 11-10-2018 IPR016875 Uncharacterised conserved protein UCP028200 VSVS12_01508 73ec09318b00f5735bec22a037f03184 506 Pfam PF16548 Flagellar assembly protein T, N-terminal domain 190 273 2.6E-8 T 11-10-2018 IPR032370 Flagellar assembly protein T, N-terminal VSVS12_03597 cccd9cccdf37f6b5e1a1b4c9fa3041e6 92 Pfam PF03891 Domain of unknown function (DUF333) 38 81 1.0E-15 T 11-10-2018 IPR005590 Protein of unknown function DUF333 VSVS12_03101 9631c868dc80ff470049474c5042c63e 158 Pfam PF05433 Glycine zipper 2TM domain 64 104 2.6E-7 T 11-10-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 VSVS12_03868 d5419f5a4c42330dc703862564f83011 145 SUPERFAMILY SSF158675 1 144 1.83E-49 T 11-10-2018 IPR023132 Sama2622-like superfamily VSVS12_03868 d5419f5a4c42330dc703862564f83011 145 Pfam PF11269 Protein of unknown function (DUF3069) 24 142 3.6E-50 T 11-10-2018 IPR021422 Protein of unknown function DUF3069 VSVS12_00514 d09e0f812ec6d218b41117448c3aef77 220 TIGRFAM TIGR04219 OMP_w_GlyGly: outer membrane protein 5 220 4.0E-52 T 11-10-2018 IPR026387 Outer membrane protein VSVS12_04202 d284505fe725a8a43d67c1ad93a6ff25 76 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 5 54 1.1E-19 T 11-10-2018 IPR010260 DNA-binding transcriptional activator AlpA VSVS12_04220 a6cf70151c1f654a09271502e920c620 118 Pfam PF04892 VanZ like family 39 111 5.9E-9 T 11-10-2018 IPR006976 VanZ-like VSVS12_04087 db17bbcfa76478d26d29259ac3d5ed52 117 Pfam PF11225 Protein of unknown function (DUF3024) 61 116 1.1E-21 T 11-10-2018 IPR021388 Bacteriophage 933W, L0084 VSVS12_01627 417a7a42c926adfdf538064472e71fac 380 Pfam PF12698 ABC-2 family transporter protein 22 368 7.8E-40 T 11-10-2018 VSVS12_00712 cb285f8ae038fba83f67ed6162370e82 400 Pfam PF01594 AI-2E family transporter 53 386 5.2E-50 T 11-10-2018 IPR002549 Transmembrane protein TqsA-like VSVS12_02131 8f83543d38131d9a27401eedbb7b803e 379 Pfam PF13391 HNH endonuclease 278 329 6.8E-6 T 11-10-2018 IPR003615 HNH nuclease VSVS12_01379 de0bea5dae80d344432f6584ca38c25b 515 Pfam PF11840 Protein of unknown function (DUF3360) 11 513 6.0E-264 T 11-10-2018 IPR021794 Protein of unknown function DUF3360 VSVS12_00906 54542f753cbef6d708481237cab621ac 211 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 23 198 4.1E-36 T 11-10-2018 IPR003740 Uncharacterised membrane protein YitT VSVS12_01889 86b8ef31a83f01afa79d6abbfcf8bfe9 157 Pfam PF11163 Protein of unknown function (DUF2947) 3 154 3.3E-69 T 11-10-2018 IPR021334 Protein of unknown function DUF2947 VSVS12_04315 2f0dec0dd99a64e56be44e35a47af421 167 Pfam PF12158 Protein of unknown function (DUF3592) 13 153 1.9E-14 T 11-10-2018 IPR021994 Protein of unknown function DUF3592 VSVS12_04222 52b0687dd20e420d9fd0e5a7e6eae531 364 Pfam PF02628 Cytochrome oxidase assembly protein 5 336 3.6E-79 T 11-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 VSVS12_02189 c7583cd90cb1e6d9493d41e88f26d09b 234 Pfam PF09335 SNARE associated Golgi protein 65 181 3.6E-22 T 11-10-2018 IPR032816 SNARE associated Golgi protein VSVS12_04401 7c875ca4a3893ada16190966f83dbecd 183 Pfam PF10881 Protein of unknown function (DUF2726) 59 167 4.1E-17 T 11-10-2018 IPR024402 Domain of unknown function DUF2726 VSVS12_01826 ef7d5510cfe79907044faa76e5d4d41c 297 Pfam PF13084 Domain of unknown function (DUF3943) 134 243 1.8E-37 T 11-10-2018 IPR025079 Domain of unknown function DUF3943 VSVS12_01178 7f9d15fb1e1387ee4c48740bb1ebf76d 238 Pfam PF01618 MotA/TolQ/ExbB proton channel family 96 195 1.4E-24 T 11-10-2018 IPR002898 MotA/TolQ/ExbB proton channel VSVS12_02930 f62bcefe2e56ea39261ce7c77663f38e 319 SUPERFAMILY SSF64182 4 317 7.67E-42 T 11-10-2018 IPR038763 DHH phosphoesterase superfamily VSVS12_03873 404ad59ef758b5d4059bf7315d96019c 92 Pfam PF10115 Transcriptional activator HlyU 2 91 3.7E-38 T 11-10-2018 IPR018772 Transcription activator HlyU VSVS12_03596 cf267d0031421a92913b59bb393fa61a 318 Pfam PF02698 DUF218 domain 17 159 1.9E-12 T 11-10-2018 IPR003848 Domain of unknown function DUF218 VSVS12_03570 de7b9f716010f3b6f2562c2cbcf0985c 466 Pfam PF11329 Protein of unknown function (DUF3131) 51 428 2.4E-139 T 11-10-2018 IPR021478 Protein of unknown function DUF3131 VSVS12_00636 f9bdfc4c2c3074c619c00e103ce041ab 255 Pfam PF06738 Putative threonine/serine exporter 10 247 1.7E-67 T 11-10-2018 IPR010619 Putative threonine/serine exporter VSVS12_02501 b61ecce2dd3ef28db9b7f9fef50a7e2c 394 Pfam PF05940 NnrS protein 16 388 1.6E-105 T 11-10-2018 IPR010266 NnrS VSVS12_03167 0f1dc8fb44c3fa93031af1e3720e4fab 331 SUPERFAMILY SSF56925 137 300 3.37E-5 T 11-10-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel VSVS12_03167 0f1dc8fb44c3fa93031af1e3720e4fab 331 Pfam PF13557 Putative MetA-pathway of phenol degradation 191 326 5.4E-8 T 11-10-2018 IPR025737 MetA-pathway of phenol degradation, putative VSVS12_00891 1a495c767e2882fa0f9ea8acebe9e4c3 428 TIGRFAM TIGR03503 TIGR03503: TIGR03503 family protein 34 411 2.2E-137 T 11-10-2018 IPR020010 Conserved hypothetical protein CHP03503 VSVS12_01859 918ac3072dfb46df16a3359c2ca3e3ef 118 Pfam PF07238 PilZ domain 6 99 4.5E-5 T 11-10-2018 IPR009875 PilZ domain GO:0035438 VSVS12_00193 1142c5b361833b37afb94098b45f833e 129 Pfam PF03899 ATP synthase I chain 15 111 2.8E-19 T 11-10-2018 IPR005598 ATP synthase protein I VSVS12_02123 78c929b8c244e611206e4b5d4bf9f185 260 Pfam PF11932 Protein of unknown function (DUF3450) 26 253 9.6E-57 T 11-10-2018 IPR016866 Uncharacterised conserved protein UCP028069 VSVS12_00280 43a199f385976bf3458386a9dc7d318d 213 Pfam PF11172 Protein of unknown function (DUF2959) 13 210 6.7E-89 T 11-10-2018 IPR021342 Protein of unknown function DUF2959 VSVS12_03303 923540c76e76ee37fc765be05acef33a 437 Pfam PF03553 Na+/H+ antiporter family 22 212 9.9E-13 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VSVS12_03303 923540c76e76ee37fc765be05acef33a 437 Pfam PF03553 Na+/H+ antiporter family 238 424 2.5E-10 T 11-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 VSVS12_03389 57f00e347aab88b3e4c8975a760ca843 139 Pfam PF11215 Protein of unknown function (DUF3010) 1 136 1.0E-55 T 11-10-2018 IPR021378 Protein of unknown function DUF3010 VSVS12_02157 ca0fddf0bf1bc6ad9fc25179e835e642 263 Pfam PF03649 Uncharacterised protein family (UPF0014) 9 248 2.7E-73 T 11-10-2018 IPR005226 UPF0014 family VSVS12_03409 42b1d9e245848169aa0a8cdc0fde2934 147 Gene3D G3DSA:1.10.720.30 24 83 7.7E-27 T 11-10-2018 IPR036361 SAP domain superfamily VSVS12_03409 42b1d9e245848169aa0a8cdc0fde2934 147 Pfam PF09905 DNA-binding protein VF530 16 78 1.6E-31 T 11-10-2018 IPR018668 DNA-binding protein VF530-like GO:0003677 VSVS12_02838 a690e93d516e54093d339b49ecc80055 194 Pfam PF01810 LysE type translocator 2 186 1.4E-40 T 11-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 VSVS12_04455 49881c85f57e122534551e4f1ebdc476 115 Pfam PF14213 STAS-like domain of unknown function (DUF4325) 31 93 6.1E-19 T 11-10-2018 IPR025474 Domain of unknown function DUF4325 VSVS12_01101 79b41e6ba0fa5c21198f421bb11aefde 468 Pfam PF03606 C4-dicarboxylate anaerobic carrier 6 465 4.3E-138 T 11-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 VSVS12_04423 45eda7c09d8e65b5d73d172d192f40a3 219 Gene3D G3DSA:1.20.5.340 33 121 2.8E-5 T 11-10-2018 VSVS12_04447 65ea70285cf3245a8faaf67e8b9139e1 530 Pfam PF07916 TraG-like protein, N-terminal region 12 495 6.2E-48 T 11-10-2018 IPR012931 TraG-like, N-terminal VSVS12_02286 6d1b0115c32a5e1698afa961fd5408c9 176 Pfam PF04315 Elongation factor P hydroxylase 11 170 8.6E-72 T 11-10-2018 IPR007411 Elongation factor P hydroxylase VSVS12_02271 ee771f2cbb245135bac755256bda5d98 163 Pfam PF02674 Colicin V production protein 4 142 6.1E-37 T 11-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 VSVS12_03948 187ec8133c0032ff2bbcc825836de878 231 SUPERFAMILY SSF49354 15 156 1.7E-7 T 11-10-2018 IPR008962 PapD-like superfamily