locus-tag class description ITG12_00005 PF12705 PD-(D/E)XK nuclease superfamily ITG12_00005 PF00580 UvrD/REP helicase N-terminal domain ITG12_00005 PF13361 UvrD-like helicase C-terminal domain ITG12_00015 PF08267 Cobalamin-independent synthase, N-terminal domain ITG12_00015 PF01717 Cobalamin-independent synthase, Catalytic domain ITG12_00025 PF00529 HlyD membrane-fusion protein of T1SS ITG12_00025 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ITG12_00030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_00030 PF03466 LysR substrate binding domain ITG12_00065 PF00672 HAMP domain ITG12_00065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_00065 PF00512 His Kinase A (phospho-acceptor) domain ITG12_00070 PF00072 Response regulator receiver domain ITG12_00070 PF00486 Transcriptional regulatory protein, C terminal ITG12_00075 PF00535 Glycosyl transferase family 2 ITG12_00080 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase ITG12_00090 PF00672 HAMP domain ITG12_00090 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG12_00095 PF08348 YheO-like PAS domain ITG12_00095 PF13309 HTH domain ITG12_00100 PF01042 Endoribonuclease L-PSP ITG12_00105 PF00375 Sodium:dicarboxylate symporter family ITG12_00110 PF07992 Pyridine nucleotide-disulphide oxidoreductase ITG12_00110 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ITG12_00135 PF04055 Radical SAM superfamily ITG12_00135 PF11842 Domain of unknown function (DUF3362) ITG12_00135 PF08497 Radical SAM N-terminal ITG12_00140 PF00990 Diguanylate cyclase, GGDEF domain ITG12_00140 PF00498 FHA domain ITG12_00140 PF00563 EAL domain ITG12_00155 PF03466 LysR substrate binding domain ITG12_00155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_00160 PF01717 Cobalamin-independent synthase, Catalytic domain ITG12_00160 PF08267 Cobalamin-independent synthase, N-terminal domain ITG12_00170 PF03795 YCII-related domain ITG12_00175 PF03061 Thioesterase superfamily ITG12_00180 PF04279 Intracellular septation protein A ITG12_00190 PF00072 Response regulator receiver domain ITG12_00190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_00195 PF17327 Acyl homoserine lactone synthase ITG12_00200 PF00375 Sodium:dicarboxylate symporter family ITG12_00210 PF00290 Tryptophan synthase alpha chain ITG12_00215 PF00291 Pyridoxal-phosphate dependent enzyme ITG12_00220 PF00218 Indole-3-glycerol phosphate synthase ITG12_00220 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ITG12_00225 PF02885 Glycosyl transferase family, helical bundle domain ITG12_00225 PF00591 Glycosyl transferase family, a/b domain ITG12_00230 PF00117 Glutamine amidotransferase class-I ITG12_00235 PF04715 Anthranilate synthase component I, N terminal region ITG12_00235 PF00425 chorismate binding enzyme ITG12_00240 PF08056 Tryptophan operon leader peptide ITG12_00245 PF02811 PHP domain ITG12_00250 PF01300 Telomere recombination ITG12_00260 PF01479 S4 domain ITG12_00260 PF00849 RNA pseudouridylate synthase ITG12_00265 PF04269 Protein of unknown function, DUF440 ITG12_00270 PF09285 Elongation factor P, C-terminal ITG12_00270 PF08207 Elongation factor P (EF-P) KOW-like domain ITG12_00270 PF01132 Elongation factor P (EF-P) OB domain ITG12_00280 PF03104 DNA polymerase family B, exonuclease domain ITG12_00280 PF00136 DNA polymerase family B ITG12_00285 PF00196 Bacterial regulatory proteins, luxR family ITG12_00285 PF00072 Response regulator receiver domain ITG12_00290 PF01541 GIY-YIG catalytic domain ITG12_00290 PF08459 UvrC Helix-hairpin-helix N-terminal ITG12_00290 PF02151 UvrB/uvrC motif ITG12_00295 PF01066 CDP-alcohol phosphatidyltransferase ITG12_00320 PF00202 Aminotransferase class-III ITG12_00325 PF16653 Saccharopine dehydrogenase C-terminal domain ITG12_00325 PF03435 Saccharopine dehydrogenase NADP binding domain ITG12_00330 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ITG12_00345 PF02464 Competence-damaged protein ITG12_00345 PF00994 Probable molybdopterin binding domain ITG12_00360 PF00268 Ribonucleotide reductase, small chain ITG12_00365 PF02867 Ribonucleotide reductase, barrel domain ITG12_00365 PF00317 Ribonucleotide reductase, all-alpha domain ITG12_00365 PF03477 ATP cone domain ITG12_00375 PF00521 DNA gyrase/topoisomerase IV, subunit A ITG12_00375 PF03989 DNA gyrase C-terminal domain, beta-propeller ITG12_00390 PF02335 Cytochrome c552 ITG12_00400 PF13247 4Fe-4S dicluster domain ITG12_00405 PF03916 Polysulphide reductase, NrfD ITG12_00410 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ITG12_00410 PF01578 Cytochrome C assembly protein ITG12_00415 PF08534 Redoxin ITG12_00420 PF03918 Cytochrome C biogenesis protein ITG12_00430 PF00925 GTP cyclohydrolase II ITG12_00455 PF01471 Putative peptidoglycan binding domain ITG12_00455 PF03734 L,D-transpeptidase catalytic domain ITG12_00460 PF05951 Bacterial protein of unknown function (DUF882) ITG12_00465 PF00753 Metallo-beta-lactamase superfamily ITG12_00480 PF03480 Bacterial extracellular solute-binding protein, family 7 ITG12_00490 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ITG12_00495 PF07730 Histidine kinase ITG12_00495 PF17200 Single Cache domain 2 ITG12_00500 PF00072 Response regulator receiver domain ITG12_00500 PF00196 Bacterial regulatory proteins, luxR family ITG12_00505 PF01047 MarR family ITG12_00510 PF02028 BCCT, betaine/carnitine/choline family transporter ITG12_00515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG12_00515 PF00672 HAMP domain ITG12_00535 PF00155 Aminotransferase class I and II ITG12_00540 PF01966 HD domain ITG12_00540 PF00672 HAMP domain ITG12_00545 PF00474 Sodium:solute symporter family ITG12_00550 PF16875 Glycosyl hydrolase family 36 N-terminal domain ITG12_00550 PF16874 Glycosyl hydrolase family 36 C-terminal domain ITG12_00555 PF00356 Bacterial regulatory proteins, lacI family ITG12_00575 PF00392 Bacterial regulatory proteins, gntR family ITG12_00575 PF00155 Aminotransferase class I and II ITG12_00590 PF01336 OB-fold nucleic acid binding domain ITG12_00590 PF00152 tRNA synthetases class II (D, K and N) ITG12_00595 PF00672 HAMP domain ITG12_00595 PF02743 Cache domain ITG12_00595 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG12_00600 PF01242 6-pyruvoyl tetrahydropterin synthase ITG12_00605 PF00072 Response regulator receiver domain ITG12_00605 PF00196 Bacterial regulatory proteins, luxR family ITG12_00620 PF13188 PAS domain ITG12_00620 PF03707 Bacterial signalling protein N terminal repeat ITG12_00620 PF00990 Diguanylate cyclase, GGDEF domain ITG12_00620 PF00563 EAL domain ITG12_00625 PF03315 Serine dehydratase beta chain ITG12_00625 PF03313 Serine dehydratase alpha chain ITG12_00630 PF03222 Tryptophan/tyrosine permease family ITG12_00635 PF00293 NUDIX domain ITG12_00645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_00645 PF00512 His Kinase A (phospho-acceptor) domain ITG12_00645 PF09308 LuxQ, periplasmic ITG12_00645 PF00072 Response regulator receiver domain ITG12_00650 PF00425 chorismate binding enzyme ITG12_00650 PF04715 Anthranilate synthase component I, N terminal region ITG12_00665 PF04317 YcjX-like family, DUF463 ITG12_00670 PF05128 Domain of unknown function (DUF697) ITG12_00675 PF00158 Sigma-54 interaction domain ITG12_00675 PF18024 Helix-turn-helix domain ITG12_00680 PF13302 Acetyltransferase (GNAT) domain ITG12_00695 PF13495 Phage integrase, N-terminal SAM-like domain ITG12_00695 PF00589 Phage integrase family ITG12_00760 PF05016 ParE toxin of type II toxin-antitoxin system, parDE ITG12_00790 PF01042 Endoribonuclease L-PSP ITG12_00865 PF00872 Transposase, Mutator family ITG12_01035 PF00872 Transposase, Mutator family ITG12_01090 PF04266 ASCH domain ITG12_01435 PF05016 ParE toxin of type II toxin-antitoxin system, parDE ITG12_01455 PF04229 GrpB protein ITG12_01585 PF00872 Transposase, Mutator family ITG12_01660 PF06940 Domain of unknown function (DUF1287) ITG12_01665 PF03575 Peptidase family S51 ITG12_01685 PF00583 Acetyltransferase (GNAT) family ITG12_01690 PF00939 Sodium:sulfate symporter transmembrane region ITG12_01695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_01695 PF00497 Bacterial extracellular solute-binding proteins, family 3 ITG12_01695 PF00512 His Kinase A (phospho-acceptor) domain ITG12_01700 PF00158 Sigma-54 interaction domain ITG12_01700 PF02954 Bacterial regulatory protein, Fis family ITG12_01700 PF00072 Response regulator receiver domain ITG12_01705 PF00990 Diguanylate cyclase, GGDEF domain ITG12_01705 PF03707 Bacterial signalling protein N terminal repeat ITG12_01705 PF13188 PAS domain ITG12_01705 PF00563 EAL domain ITG12_01710 PF01966 HD domain ITG12_01710 PF11871 Domain of unknown function (DUF3391) ITG12_01715 PF01810 LysE type translocator ITG12_01720 PF11230 Protein of unknown function (DUF3029) ITG12_01725 PF04055 Radical SAM superfamily ITG12_01730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_01730 PF03466 LysR substrate binding domain ITG12_01735 PF03741 Integral membrane protein TerC family ITG12_01745 PF01966 HD domain ITG12_01755 PF00990 Diguanylate cyclase, GGDEF domain ITG12_01755 PF17158 Membrane-associated sensor, integral membrane domain ITG12_01765 PF00465 Iron-containing alcohol dehydrogenase ITG12_01770 PF03222 Tryptophan/tyrosine permease family ITG12_01775 PF01966 HD domain ITG12_01775 PF00072 Response regulator receiver domain ITG12_01785 PF00005 ABC transporter ITG12_01790 PF01497 Periplasmic binding protein ITG12_01795 PF01032 FecCD transport family ITG12_01800 PF00593 TonB dependent receptor ITG12_01800 PF07715 TonB-dependent Receptor Plug Domain ITG12_01810 PF00005 ABC transporter ITG12_01810 PF00664 ABC transporter transmembrane region ITG12_01815 PF00005 ABC transporter ITG12_01815 PF00664 ABC transporter transmembrane region ITG12_01820 PF07963 Prokaryotic N-terminal methylation motif ITG12_01825 PF03466 LysR substrate binding domain ITG12_01825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_01835 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ITG12_01835 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ITG12_01850 PF00012 Hsp70 protein ITG12_01855 PF00012 Hsp70 protein ITG12_01865 PF00990 Diguanylate cyclase, GGDEF domain ITG12_01895 PF02868 Thermolysin metallopeptidase, alpha-helical domain ITG12_01895 PF04151 Bacterial pre-peptidase C-terminal domain ITG12_01895 PF07504 Fungalysin/Thermolysin Propeptide Motif ITG12_01895 PF01447 Thermolysin metallopeptidase, catalytic domain ITG12_01895 PF03413 Peptidase propeptide and YPEB domain ITG12_01905 PF00384 Molybdopterin oxidoreductase ITG12_01905 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ITG12_01905 PF01568 Molydopterin dinucleotide binding domain ITG12_01910 PF13247 4Fe-4S dicluster domain ITG12_01910 PF12800 4Fe-4S binding domain ITG12_01915 PF04976 DMSO reductase anchor subunit (DmsC) ITG12_01920 PF02613 Nitrate reductase delta subunit ITG12_01930 PF02525 Flavodoxin-like fold ITG12_01935 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold ITG12_01935 PF00270 DEAD/DEAH box helicase ITG12_01935 PF11898 Domain of unknown function (DUF3418) ITG12_01935 PF04408 Helicase associated domain (HA2) ITG12_01935 PF00271 Helicase conserved C-terminal domain ITG12_01965 PF04204 Homoserine O-succinyltransferase ITG12_01990 PF00893 Small Multidrug Resistance protein ITG12_01995 PF13520 Amino acid permease ITG12_02000 PF01810 LysE type translocator ITG12_02005 PF03466 LysR substrate binding domain ITG12_02005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_02010 PF03279 Bacterial lipid A biosynthesis acyltransferase ITG12_02025 PF01047 MarR family ITG12_02040 PF02074 Carboxypeptidase Taq (M32) metallopeptidase ITG12_02045 PF01810 LysE type translocator ITG12_02055 PF03440 Aerolysin/Pertussis toxin (APT) domain ITG12_02055 PF01117 Aerolysin toxin ITG12_02060 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ITG12_02065 PF03440 Aerolysin/Pertussis toxin (APT) domain ITG12_02065 PF01117 Aerolysin toxin ITG12_02080 PF01235 Sodium:alanine symporter family ITG12_02110 PF00884 Sulfatase ITG12_02115 PF01406 tRNA synthetases class I (C) catalytic domain ITG12_02120 PF01554 MatE ITG12_02125 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ITG12_02130 PF00528 Binding-protein-dependent transport system inner membrane component ITG12_02135 PF00571 CBS domain ITG12_02135 PF00005 ABC transporter ITG12_02140 PF00571 CBS domain ITG12_02150 PF02028 BCCT, betaine/carnitine/choline family transporter ITG12_02155 PF00583 Acetyltransferase (GNAT) family ITG12_02160 PF00202 Aminotransferase class-III ITG12_02165 PF06339 Ectoine synthase ITG12_02170 PF13840 ACT domain ITG12_02170 PF00696 Amino acid kinase family ITG12_02175 PF00034 Cytochrome c ITG12_02175 PF03150 Di-haem cytochrome c peroxidase ITG12_02180 PF05922 Peptidase inhibitor I9 ITG12_02180 PF00082 Subtilase family ITG12_02180 PF04151 Bacterial pre-peptidase C-terminal domain ITG12_02210 PF00174 Oxidoreductase molybdopterin binding domain ITG12_02215 PF01794 Ferric reductase like transmembrane component ITG12_02225 PF07690 Major Facilitator Superfamily ITG12_02230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_02230 PF03466 LysR substrate binding domain ITG12_02235 PF00375 Sodium:dicarboxylate symporter family ITG12_02240 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ITG12_02240 PF07992 Pyridine nucleotide-disulphide oxidoreductase ITG12_02250 PF04542 Sigma-70 region 2 ITG12_02250 PF08281 Sigma-70, region 4 ITG12_02260 PF04262 Glutamate-cysteine ligase ITG12_02265 PF00005 ABC transporter ITG12_02265 PF00664 ABC transporter transmembrane region ITG12_02270 PF00005 ABC transporter ITG12_02270 PF00664 ABC transporter transmembrane region ITG12_02290 PF13533 Biotin-lipoyl like ITG12_02305 PF04205 FMN-binding domain ITG12_02305 PF03358 NADPH-dependent FMN reductase ITG12_02305 PF00890 FAD binding domain ITG12_02310 PF02424 ApbE family ITG12_02325 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ITG12_02325 PF17203 Single cache domain 3 ITG12_02325 PF00989 PAS fold ITG12_02325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_02330 PF00072 Response regulator receiver domain ITG12_02330 PF12431 Transcriptional regulator ITG12_02335 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ITG12_02335 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ITG12_02340 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ITG12_02345 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ITG12_02345 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ITG12_02380 PF01590 GAF domain ITG12_02380 PF02954 Bacterial regulatory protein, Fis family ITG12_02380 PF00158 Sigma-54 interaction domain ITG12_02385 PF00171 Aldehyde dehydrogenase family ITG12_02390 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ITG12_02390 PF00529 HlyD membrane-fusion protein of T1SS ITG12_02395 PF00873 AcrB/AcrD/AcrF family ITG12_02400 PF16868 NMT1-like family ITG12_02410 PF03222 Tryptophan/tyrosine permease family ITG12_02420 PF01925 Sulfite exporter TauE/SafE ITG12_02425 PF01970 Tripartite tricarboxylate transporter TctA family ITG12_02445 PF00583 Acetyltransferase (GNAT) family ITG12_02465 PF00069 Protein kinase domain ITG12_02465 PF03793 PASTA domain ITG12_02480 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE ITG12_02500 PF17871 AAA lid domain ITG12_02500 PF10431 C-terminal, D2-small domain, of ClpB protein ITG12_02500 PF07724 AAA domain (Cdc48 subfamily) ITG12_02500 PF00004 ATPase family associated with various cellular activities (AAA) ITG12_02520 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ITG12_02525 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ITG12_02555 PF04717 Type VI secretion system, phage-baseplate injector ITG12_02555 PF06715 Gp5 C-terminal repeat (3 copies) ITG12_02575 PF00285 Citrate synthase, C-terminal domain ITG12_02580 PF00330 Aconitase family (aconitate hydratase) ITG12_02580 PF00694 Aconitase C-terminal domain ITG12_02585 PF04303 PrpF protein ITG12_02590 PF16177 Acetyl-coenzyme A synthetase N-terminus ITG12_02590 PF00501 AMP-binding enzyme ITG12_02590 PF13193 AMP-binding enzyme C-terminal domain ITG12_02595 PF00583 Acetyltransferase (GNAT) family ITG12_02600 PF00089 Trypsin ITG12_02615 PF04055 Radical SAM superfamily ITG12_02620 PF06508 Queuosine biosynthesis protein QueC ITG12_02625 PF17151 Periplasmic sensor domain ITG12_02625 PF00990 Diguanylate cyclase, GGDEF domain ITG12_02635 PF00691 OmpA family ITG12_02635 PF05736 OprF membrane domain ITG12_02650 PF00691 OmpA family ITG12_02650 PF05736 OprF membrane domain ITG12_02665 PF10672 S-adenosylmethionine-dependent methyltransferase ITG12_02665 PF17785 PUA-like domain ITG12_02670 PF02743 Cache domain ITG12_02670 PF00672 HAMP domain ITG12_02670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG12_02675 PF00708 Acylphosphatase ITG12_02680 PF04358 DsrC like protein ITG12_02690 PF01027 Inhibitor of apoptosis-promoting Bax1 ITG12_02695 PF00005 ABC transporter ITG12_02700 PF00528 Binding-protein-dependent transport system inner membrane component ITG12_02705 PF00528 Binding-protein-dependent transport system inner membrane component ITG12_02710 PF00497 Bacterial extracellular solute-binding proteins, family 3 ITG12_02715 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ITG12_02715 PF14824 Sirohaem biosynthesis protein central ITG12_02715 PF10414 Sirohaem synthase dimerisation region ITG12_02720 PF04461 Protein of unknown function (DUF520) ITG12_02725 PF00793 DAHP synthetase I family ITG12_02745 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF ITG12_02745 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF ITG12_02745 PF01189 16S rRNA methyltransferase RsmB/F ITG12_02750 PF02470 MlaD protein ITG12_02755 PF04403 Paraquat-inducible protein A ITG12_02760 PF00664 ABC transporter transmembrane region ITG12_02760 PF00005 ABC transporter ITG12_02765 PF13185 GAF domain ITG12_02770 PF04352 ProQ/FINO family ITG12_02770 PF17516 ProQ C-terminal domain ITG12_02775 PF11818 C-terminal domain of tail specific protease (DUF3340) ITG12_02775 PF00595 PDZ domain ITG12_02775 PF03572 Peptidase family S41 ITG12_02775 PF17804 Tail specific protease N-terminal domain ITG12_02785 PF01433 Peptidase family M1 domain ITG12_02785 PF11940 Domain of unknown function (DUF3458) Ig-like fold ITG12_02785 PF17432 Domain of unknown function (DUF3458_C) ARM repeats ITG12_02795 PF05088 Bacterial NAD-glutamate dehydrogenase ITG12_02800 PF01180 Dihydroorotate dehydrogenase ITG12_02805 PF07126 Cell-division protein ZapC ITG12_02810 PF02926 THUMP domain ITG12_02810 PF10672 S-adenosylmethionine-dependent methyltransferase ITG12_02810 PF01170 Putative RNA methylase family UPF0020 ITG12_02820 PF00005 ABC transporter ITG12_02820 PF16326 ABC transporter C-terminal domain ITG12_02820 PF12848 ABC transporter ITG12_02830 PF04957 Ribosome modulation factor ITG12_02835 PF07977 FabA-like domain ITG12_02840 PF13654 AAA domain ITG12_02840 PF05362 Lon protease (S16) C-terminal proteolytic domain ITG12_02845 PF06303 MatP N-terminal domain ITG12_02845 PF17414 MatP C-terminal ribbon-helix-helix domain ITG12_02870 PF01548 Transposase ITG12_02870 PF02371 Transposase IS116/IS110/IS902 family ITG12_02880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_02880 PF00512 His Kinase A (phospho-acceptor) domain ITG12_02880 PF09308 LuxQ, periplasmic ITG12_02880 PF00072 Response regulator receiver domain ITG12_02895 PF00115 Cytochrome C and Quinol oxidase polypeptide I ITG12_02910 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP ITG12_02910 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ITG12_02920 PF00403 Heavy-metal-associated domain ITG12_02935 PF13545 Crp-like helix-turn-helix domain ITG12_02935 PF00027 Cyclic nucleotide-binding domain ITG12_02940 PF00582 Universal stress protein family ITG12_02945 PF01171 PP-loop family ITG12_02965 PF00005 ABC transporter ITG12_02965 PF08402 TOBE domain ITG12_02970 PF00528 Binding-protein-dependent transport system inner membrane component ITG12_02975 PF00528 Binding-protein-dependent transport system inner membrane component ITG12_02980 PF13416 Bacterial extracellular solute-binding protein ITG12_02985 PF13416 Bacterial extracellular solute-binding protein ITG12_02990 PF02146 Sir2 family ITG12_03005 PF13247 4Fe-4S dicluster domain ITG12_03010 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ITG12_03010 PF01568 Molydopterin dinucleotide binding domain ITG12_03010 PF00384 Molybdopterin oxidoreductase ITG12_03020 PF02613 Nitrate reductase delta subunit ITG12_03040 PF02634 FdhD/NarQ family ITG12_03045 PF00005 ABC transporter ITG12_03045 PF12848 ABC transporter ITG12_03060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_03060 PF00512 His Kinase A (phospho-acceptor) domain ITG12_03065 PF02954 Bacterial regulatory protein, Fis family ITG12_03065 PF00072 Response regulator receiver domain ITG12_03065 PF00158 Sigma-54 interaction domain ITG12_03070 PF12849 PBP superfamily domain ITG12_03075 PF00528 Binding-protein-dependent transport system inner membrane component ITG12_03080 PF08402 TOBE domain ITG12_03080 PF00005 ABC transporter ITG12_03085 PF12804 MobA-like NTP transferase domain ITG12_03090 PF00994 Probable molybdopterin binding domain ITG12_03090 PF03454 MoeA C-terminal region (domain IV) ITG12_03090 PF03453 MoeA N-terminal region (domain I and II) ITG12_03100 PF00480 ROK family ITG12_03105 PF03942 DTW domain ITG12_03150 PF12729 Four helix bundle sensory module for signal transduction ITG12_03150 PF00672 HAMP domain ITG12_03150 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG12_03155 PF00877 NlpC/P60 family ITG12_03165 PF00990 Diguanylate cyclase, GGDEF domain ITG12_03165 PF05230 MASE2 domain ITG12_03170 PF01339 CheB methylesterase ITG12_03170 PF00072 Response regulator receiver domain ITG12_03175 PF03881 Fructosamine kinase ITG12_03185 PF00677 Lumazine binding domain ITG12_03190 PF01554 MatE ITG12_03200 PF01068 ATP dependent DNA ligase domain ITG12_03200 PF14743 DNA ligase OB-like domain ITG12_03205 PF01740 STAS domain ITG12_03210 PF00691 OmpA family ITG12_03215 PF02563 Polysaccharide biosynthesis/export protein ITG12_03215 PF10531 SLBB domain ITG12_03220 PF13614 AAA domain ITG12_03230 PF02954 Bacterial regulatory protein, Fis family ITG12_03230 PF00072 Response regulator receiver domain ITG12_03230 PF00158 Sigma-54 interaction domain ITG12_03240 PF00534 Glycosyl transferases group 1 ITG12_03270 PF13439 Glycosyltransferase Family 4 ITG12_03270 PF00534 Glycosyl transferases group 1 ITG12_03280 PF02397 Bacterial sugar transferase ITG12_03290 PF13322 Domain of unknown function (DUF4092) ITG12_03290 PF17291 N-terminal domain of M60-like peptidases ITG12_03290 PF13402 Peptidase M60, enhancin and enhancin-like ITG12_03310 PF00990 Diguanylate cyclase, GGDEF domain ITG12_03310 PF00563 EAL domain ITG12_03310 PF03707 Bacterial signalling protein N terminal repeat ITG12_03310 PF13188 PAS domain ITG12_03315 PF00512 His Kinase A (phospho-acceptor) domain ITG12_03315 PF01627 Hpt domain ITG12_03315 PF00072 Response regulator receiver domain ITG12_03315 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ITG12_03315 PF00672 HAMP domain ITG12_03315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_03335 PF00132 Bacterial transferase hexapeptide (six repeats) ITG12_03335 PF12464 Maltose acetyltransferase ITG12_03345 PF01928 CYTH domain ITG12_03360 PF01047 MarR family ITG12_03375 PF00563 EAL domain ITG12_03375 PF00990 Diguanylate cyclase, GGDEF domain ITG12_03375 PF13426 PAS domain ITG12_03390 PF03729 Short repeat of unknown function (DUF308) ITG12_03395 PF00924 Mechanosensitive ion channel ITG12_03405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG12_03405 PF08447 PAS fold ITG12_03405 PF13426 PAS domain ITG12_03410 PF00691 OmpA family ITG12_03410 PF01389 OmpA-like transmembrane domain ITG12_03415 PF11999 Protein of unknown function (DUF3494) ITG12_03415 PF02368 Bacterial Ig-like domain (group 2) ITG12_03420 PF04151 Bacterial pre-peptidase C-terminal domain ITG12_03420 PF00082 Subtilase family ITG12_03420 PF05922 Peptidase inhibitor I9 ITG12_03425 PF13088 BNR repeat-like domain ITG12_03425 PF00754 F5/8 type C domain ITG12_03425 PF10633 NPCBM-associated, NEW3 domain of alpha-galactosidase ITG12_03430 PF17945 Beta/Gamma crystallin ITG12_03430 PF12561 ToxR activated gene A lipoprotein domain ITG12_03435 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family ITG12_03510 PF01966 HD domain ITG12_03510 PF00072 Response regulator receiver domain ITG12_03515 PF00117 Glutamine amidotransferase class-I ITG12_03515 PF03352 Methyladenine glycosylase ITG12_03515 PF13673 Acetyltransferase (GNAT) domain ITG12_03515 PF13302 Acetyltransferase (GNAT) domain ITG12_03515 PF00958 GMP synthase C terminal domain ITG12_03525 PF00534 Glycosyl transferases group 1 ITG12_03525 PF13439 Glycosyltransferase Family 4 ITG12_03535 PF05552 Conserved TM helix ITG12_03535 PF00924 Mechanosensitive ion channel ITG12_03565 PF07728 AAA domain (dynein-related subfamily) ITG12_03565 PF12102 Domain of unknown function (DUF3578) ITG12_03575 PF13538 UvrD-like helicase C-terminal domain ITG12_03575 PF14490 Helix-hairpin-helix containing domain ITG12_03575 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain ITG12_03585 PF01420 Type I restriction modification DNA specificity domain ITG12_03590 PF02384 N-6 DNA Methylase ITG12_03595 PF08463 EcoEI R protein C-terminal ITG12_03595 PF00271 Helicase conserved C-terminal domain ITG12_03595 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) ITG12_03595 PF04851 Type III restriction enzyme, res subunit ITG12_03665 PF02798 Glutathione S-transferase, N-terminal domain ITG12_03665 PF14497 Glutathione S-transferase, C-terminal domain ITG12_03675 PF04209 homogentisate 1,2-dioxygenase ITG12_03680 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ITG12_03690 PF07687 Peptidase dimerisation domain ITG12_03690 PF01546 Peptidase family M20/M25/M40 ITG12_03695 PF00041 Fibronectin type III domain ITG12_03695 PF12561 ToxR activated gene A lipoprotein domain ITG12_03720 PF01048 Phosphorylase superfamily ITG12_03725 PF00990 Diguanylate cyclase, GGDEF domain ITG12_03725 PF00072 Response regulator receiver domain ITG12_03730 PF05971 RNA methyltransferase ITG12_03735 PF01863 Protein of unknown function DUF45 ITG12_03760 PF07963 Prokaryotic N-terminal methylation motif ITG12_03765 PF03466 LysR substrate binding domain ITG12_03765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_03770 PF07690 Major Facilitator Superfamily ITG12_03790 PF00005 ABC transporter ITG12_03795 PF01032 FecCD transport family ITG12_03800 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family ITG12_03815 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase ITG12_03820 PF02654 Cobalamin-5-phosphate synthase ITG12_03825 PF02277 Phosphoribosyltransferase ITG12_03830 PF01613 Flavin reductase like domain ITG12_03835 PF13460 NAD(P)H-binding ITG12_03840 PF00375 Sodium:dicarboxylate symporter family ITG12_03850 PF08411 Exonuclease C-terminal ITG12_03850 PF00929 Exonuclease ITG12_03855 PF03788 LrgA family ITG12_03860 PF04172 LrgB-like family ITG12_03865 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region ITG12_03865 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ITG12_03870 PF02222 ATP-grasp domain ITG12_03875 PF05724 Thiopurine S-methyltransferase (TPMT) ITG12_03885 PF00216 Bacterial DNA-binding protein ITG12_03900 PF03483 B3/4 domain ITG12_03900 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ITG12_03900 PF01588 Putative tRNA binding domain ITG12_03900 PF03484 tRNA synthetase B5 domain ITG12_03900 PF03147 Ferredoxin-fold anticodon binding domain ITG12_03905 PF01409 tRNA synthetases class II core domain (F) ITG12_03905 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ITG12_03935 PF01906 Putative heavy-metal-binding ITG12_03940 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ITG12_03945 PF01042 Endoribonuclease L-PSP ITG12_03955 PF00453 Ribosomal protein L20 ITG12_03960 PF01632 Ribosomal protein L35 ITG12_03965 PF05198 Translation initiation factor IF-3, N-terminal domain ITG12_03965 PF00707 Translation initiation factor IF-3, C-terminal domain ITG12_03970 PF03129 Anticodon binding domain ITG12_03970 PF02824 TGS domain ITG12_03970 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ITG12_03970 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ITG12_03980 PF07702 UTRA domain ITG12_03980 PF00392 Bacterial regulatory proteins, gntR family ITG12_03985 PF01979 Amidohydrolase family ITG12_03990 PF00491 Arginase family ITG12_03995 PF17392 Urocanase C-terminal domain ITG12_03995 PF17391 Urocanase N-terminal domain ITG12_03995 PF01175 Urocanase Rossmann-like domain ITG12_04000 PF00221 Aromatic amino acid lyase ITG12_04020 PF03496 ADP-ribosyltransferase exoenzyme ITG12_04025 PF03496 ADP-ribosyltransferase exoenzyme ITG12_04045 PF02913 FAD linked oxidases, C-terminal domain ITG12_04045 PF01565 FAD binding domain ITG12_04045 PF13183 4Fe-4S dicluster domain ITG12_04060 PF05736 OprF membrane domain ITG12_04060 PF00691 OmpA family ITG12_04085 PF01259 SAICAR synthetase ITG12_04095 PF02253 Phospholipase A1 ITG12_04100 PF08482 ATP-dependent helicase C-terminal ITG12_04100 PF00270 DEAD/DEAH box helicase ITG12_04100 PF04408 Helicase associated domain (HA2) ITG12_04100 PF00271 Helicase conserved C-terminal domain ITG12_04105 PF00390 Malic enzyme, N-terminal domain ITG12_04105 PF03949 Malic enzyme, NAD binding domain ITG12_04110 PF02698 DUF218 domain ITG12_04115 PF00939 Sodium:sulfate symporter transmembrane region ITG12_04120 PF00990 Diguanylate cyclase, GGDEF domain ITG12_04120 PF08448 PAS fold ITG12_04130 PF00266 Aminotransferase class-V ITG12_04140 PF07992 Pyridine nucleotide-disulphide oxidoreductase ITG12_04145 PF00664 ABC transporter transmembrane region ITG12_04145 PF00005 ABC transporter ITG12_04150 PF00005 ABC transporter ITG12_04150 PF00664 ABC transporter transmembrane region ITG12_04155 PF00291 Pyridoxal-phosphate dependent enzyme ITG12_04160 PF03466 LysR substrate binding domain ITG12_04160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_04165 PF00563 EAL domain ITG12_04165 PF12792 CSS motif domain associated with EAL ITG12_04195 PF08448 PAS fold ITG12_04195 PF08447 PAS fold ITG12_04195 PF00990 Diguanylate cyclase, GGDEF domain ITG12_04195 PF00563 EAL domain ITG12_04205 PF00266 Aminotransferase class-V ITG12_04215 PF00512 His Kinase A (phospho-acceptor) domain ITG12_04215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_04215 PF00497 Bacterial extracellular solute-binding proteins, family 3 ITG12_04230 PF04994 TfoX C-terminal domain ITG12_04230 PF04993 TfoX N-terminal domain ITG12_04240 PF03956 Lysine exporter LysO ITG12_04250 PF00282 Pyridoxal-dependent decarboxylase conserved domain ITG12_04255 PF01418 Helix-turn-helix domain, rpiR family ITG12_04255 PF01380 SIS domain ITG12_04260 PF00465 Iron-containing alcohol dehydrogenase ITG12_04265 PF00462 Glutaredoxin ITG12_04270 PF06826 Predicted Permease Membrane Region ITG12_04270 PF02080 TrkA-C domain ITG12_04275 PF12241 Trans-2-enoyl-CoA reductase catalytic region ITG12_04275 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase ITG12_04275 PF07055 Enoyl reductase FAD binding domain ITG12_04280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ITG12_04280 PF02770 Acyl-CoA dehydrogenase, middle domain ITG12_04280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ITG12_04280 PF09317 Domain of unknown function (DUF1974) ITG12_04285 PF16295 Tetracyclin repressor-like, C-terminal domain ITG12_04285 PF00440 Bacterial regulatory proteins, tetR family ITG12_04290 PF06965 Na+/H+ antiporter 1 ITG12_04305 PF00005 ABC transporter ITG12_04310 PF01554 MatE ITG12_04315 PF13460 NAD(P)H-binding ITG12_04315 PF11066 Protein of unknown function (DUF2867) ITG12_04320 PF01734 Patatin-like phospholipase ITG12_04330 PF07690 Major Facilitator Superfamily ITG12_04335 PF00849 RNA pseudouridylate synthase ITG12_04335 PF01479 S4 domain ITG12_04340 PF00271 Helicase conserved C-terminal domain ITG12_04340 PF04851 Type III restriction enzyme, res subunit ITG12_04345 PF08448 PAS fold ITG12_04345 PF00990 Diguanylate cyclase, GGDEF domain ITG12_04355 PF00072 Response regulator receiver domain ITG12_04355 PF00486 Transcriptional regulatory protein, C terminal ITG12_04360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_04375 PF01386 Ribosomal L25p family ITG12_04385 PF00583 Acetyltransferase (GNAT) family ITG12_04390 PF02872 5'-nucleotidase, C-terminal domain ITG12_04390 PF00149 Calcineurin-like phosphoesterase ITG12_04400 PF06945 Protein of unknown function (DUF1289) ITG12_04410 PF01740 STAS domain ITG12_04410 PF00916 Sulfate permease family ITG12_04420 PF00072 Response regulator receiver domain ITG12_04420 PF00196 Bacterial regulatory proteins, luxR family ITG12_04425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_04425 PF00512 His Kinase A (phospho-acceptor) domain ITG12_04430 PF00581 Rhodanese-like domain ITG12_04435 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ITG12_04435 PF07992 Pyridine nucleotide-disulphide oxidoreductase ITG12_04445 PF09335 SNARE associated Golgi protein ITG12_04450 PF13416 Bacterial extracellular solute-binding protein ITG12_04455 PF00528 Binding-protein-dependent transport system inner membrane component ITG12_04460 PF00005 ABC transporter ITG12_04465 PF01066 CDP-alcohol phosphatidyltransferase ITG12_04475 PF01590 GAF domain ITG12_04475 PF00158 Sigma-54 interaction domain ITG12_04480 PF03063 Prismane/CO dehydrogenase family ITG12_04485 PF00970 Oxidoreductase FAD-binding domain ITG12_04485 PF00111 2Fe-2S iron-sulfur cluster binding domain ITG12_04485 PF00175 Oxidoreductase NAD-binding domain ITG12_04495 PF00849 RNA pseudouridylate synthase ITG12_04500 PF12729 Four helix bundle sensory module for signal transduction ITG12_04500 PF00672 HAMP domain ITG12_04500 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG12_04505 PF00209 Sodium:neurotransmitter symporter family ITG12_04510 PF13091 PLD-like domain ITG12_04510 PF13396 Phospholipase_D-nuclease N-terminal ITG12_04515 PF01053 Cys/Met metabolism PLP-dependent enzyme ITG12_04520 PF00561 alpha/beta hydrolase fold ITG12_04525 PF03280 Proteobacterial lipase chaperone protein ITG12_04530 PF03352 Methyladenine glycosylase ITG12_04535 PF00873 AcrB/AcrD/AcrF family ITG12_04540 PF13533 Biotin-lipoyl like ITG12_04555 PF06667 Phage shock protein B ITG12_04560 PF04012 PspA/IM30 family ITG12_04565 PF02954 Bacterial regulatory protein, Fis family ITG12_04565 PF00158 Sigma-54 interaction domain ITG12_04570 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ITG12_04575 PF00528 Binding-protein-dependent transport system inner membrane component ITG12_04580 PF00528 Binding-protein-dependent transport system inner membrane component ITG12_04580 PF12911 N-terminal TM domain of oligopeptide transport permease C ITG12_04585 PF00005 ABC transporter ITG12_04585 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ITG12_04590 PF00005 ABC transporter ITG12_04600 PF01368 DHH family ITG12_04600 PF02833 DHHA2 domain ITG12_04605 PF00950 ABC 3 transport family ITG12_04610 PF00950 ABC 3 transport family ITG12_04615 PF00005 ABC transporter ITG12_04620 PF01297 Zinc-uptake complex component A periplasmic ITG12_04630 PF00384 Molybdopterin oxidoreductase ITG12_04630 PF18364 Molybdopterin oxidoreductase N-terminal domain ITG12_04630 PF01568 Molydopterin dinucleotide binding domain ITG12_04635 PF03264 NapC/NirT cytochrome c family, N-terminal region ITG12_04640 PF06796 Periplasmic nitrate reductase protein NapE ITG12_04645 PF03649 Uncharacterised protein family (UPF0014) ITG12_04655 PF01226 Formate/nitrite transporter ITG12_04680 PF02698 DUF218 domain ITG12_04685 PF00265 Thymidine kinase ITG12_04690 PF09190 DALR domain ITG12_04690 PF01406 tRNA synthetases class I (C) catalytic domain ITG12_04695 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ITG12_04700 PF00149 Calcineurin-like phosphoesterase ITG12_04705 PF08668 HDOD domain ITG12_04705 PF00563 EAL domain ITG12_04710 PF02810 SEC-C motif ITG12_04715 PF01502 Phosphoribosyl-AMP cyclohydrolase ITG12_04715 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ITG12_04720 PF00977 Histidine biosynthesis protein ITG12_04725 PF00977 Histidine biosynthesis protein ITG12_04730 PF00117 Glutamine amidotransferase class-I ITG12_04735 PF08645 Polynucleotide kinase 3 phosphatase ITG12_04735 PF00475 Imidazoleglycerol-phosphate dehydratase ITG12_04740 PF00155 Aminotransferase class I and II ITG12_04745 PF00815 Histidinol dehydrogenase ITG12_04750 PF01634 ATP phosphoribosyltransferase ITG12_04750 PF08029 HisG, C-terminal domain ITG12_04755 PF03553 Na+/H+ antiporter family ITG12_04760 PF00816 H-NS histone family ITG12_04765 PF00294 pfkB family carbohydrate kinase ITG12_04780 PF04356 Protein of unknown function (DUF489) ITG12_04785 PF08328 Adenylosuccinate lyase C-terminal ITG12_04785 PF00206 Lyase ITG12_04820 PF00106 short chain dehydrogenase ITG12_04830 PF01435 Peptidase family M48 ITG12_04845 PF08241 Methyltransferase domain ITG12_04850 PF00155 Aminotransferase class I and II ITG12_04855 PF04055 Radical SAM superfamily ITG12_04855 PF06968 Biotin and Thiamin Synthesis associated domain ITG12_04860 PF00202 Aminotransferase class-III ITG12_04865 PF01258 Prokaryotic dksA/traR C4-type zinc finger ITG12_04880 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ITG12_04880 PF02403 Seryl-tRNA synthetase N-terminal domain ITG12_04885 PF12002 MgsA AAA+ ATPase C terminal ITG12_04885 PF16193 AAA C-terminal domain ITG12_04885 PF00004 ATPase family associated with various cellular activities (AAA) ITG12_04890 PF03548 Outer membrane lipoprotein carrier protein LolA ITG12_04895 PF17854 FtsK alpha domain ITG12_04895 PF09397 Ftsk gamma domain ITG12_04895 PF13491 4TM region of DNA translocase FtsK/SpoIIIE ITG12_04895 PF01580 FtsK/SpoIIIE family ITG12_04900 PF01037 Lrp/AsnC ligand binding domain ITG12_04905 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ITG12_04905 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ITG12_04915 PF03466 LysR substrate binding domain ITG12_04915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_04925 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) ITG12_04930 PF13333 Integrase core domain ITG12_04930 PF00665 Integrase core domain ITG12_04930 PF13276 HTH-like domain ITG12_04990 PF04151 Bacterial pre-peptidase C-terminal domain ITG12_04990 PF08453 Peptidase family M9 N-terminal ITG12_04990 PF01752 Collagenase ITG12_05010 PF03372 Endonuclease/Exonuclease/phosphatase family ITG12_05025 PF00579 tRNA synthetases class I (W and Y) ITG12_05030 PF00141 Peroxidase ITG12_05035 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ITG12_05035 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ITG12_05045 PF01081 KDPG and KHG aldolase ITG12_05050 PF00294 pfkB family carbohydrate kinase ITG12_05055 PF07883 Cupin domain ITG12_05060 PF07940 Heparinase II/III-like protein ITG12_05060 PF05426 Alginate lyase ITG12_05065 PF05426 Alginate lyase ITG12_05065 PF07940 Heparinase II/III-like protein ITG12_05070 PF08787 Alginate lyase ITG12_05080 PF07729 FCD domain ITG12_05080 PF00392 Bacterial regulatory proteins, gntR family ITG12_05090 PF07729 FCD domain ITG12_05090 PF00392 Bacterial regulatory proteins, gntR family ITG12_05095 PF00571 CBS domain ITG12_05100 PF00929 Exonuclease ITG12_05100 PF14579 Helix-hairpin-helix motif ITG12_05100 PF02811 PHP domain ITG12_05100 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ITG12_05100 PF07733 Bacterial DNA polymerase III alpha NTPase domain ITG12_05110 PF01464 Transglycosylase SLT domain ITG12_05110 PF00497 Bacterial extracellular solute-binding proteins, family 3 ITG12_05125 PF00474 Sodium:solute symporter family ITG12_05145 PF01557 Fumarylacetoacetate (FAA) hydrolase family ITG12_05155 PF03606 C4-dicarboxylate anaerobic carrier ITG12_05160 PF07687 Peptidase dimerisation domain ITG12_05160 PF01546 Peptidase family M20/M25/M40 ITG12_05165 PF07729 FCD domain ITG12_05165 PF00392 Bacterial regulatory proteins, gntR family ITG12_05175 PF00873 AcrB/AcrD/AcrF family ITG12_05180 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ITG12_05180 PF00529 HlyD membrane-fusion protein of T1SS ITG12_05195 PF02743 Cache domain ITG12_05195 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG12_05195 PF00672 HAMP domain ITG12_05205 PF00528 Binding-protein-dependent transport system inner membrane component ITG12_05210 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ITG12_05215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ITG12_05215 PF00005 ABC transporter ITG12_05220 PF00005 ABC transporter ITG12_05220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ITG12_05225 PF01554 MatE ITG12_05240 PF03831 PhnA domain ITG12_05240 PF08274 PhnA Zinc-Ribbon ITG12_05245 PF00232 Glycosyl hydrolase family 1 ITG12_05250 PF02378 Phosphotransferase system, EIIC ITG12_05250 PF00367 phosphotransferase system, EIIB ITG12_05255 PF00884 Sulfatase ITG12_05285 PF05844 YopD protein ITG12_05295 PF07720 Tetratricopeptide repeat ITG12_05300 PF04792 V antigen (LcrV) protein ITG12_05315 PF00771 FHIPEP family ITG12_05335 PF09059 TyeA ITG12_05340 PF07201 HrpJ-like domain ITG12_05345 PF02874 ATP synthase alpha/beta family, beta-barrel domain ITG12_05345 PF18269 T3SS EscN ATPase C-terminal domain ITG12_05345 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ITG12_05360 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ITG12_05365 PF00813 FliP family ITG12_05370 PF01313 Bacterial export proteins, family 3 ITG12_05375 PF01311 Bacterial export proteins, family 1 ITG12_05380 PF01312 FlhB HrpN YscU SpaS Family ITG12_05395 PF02661 Fic/DOC family ITG12_05405 PF02108 Flagellar assembly protein FliH ITG12_05415 PF01514 Secretory protein of YscJ/FliF family ITG12_05420 PF17001 Type III secretion basal body protein I, YscI, HrpB, PscI ITG12_05435 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF ITG12_05450 PF03958 Bacterial type II/III secretion system short domain ITG12_05450 PF00263 Bacterial type II and III secretion system protein ITG12_05465 PF12833 Helix-turn-helix domain ITG12_05520 PF00691 OmpA family ITG12_05520 PF01389 OmpA-like transmembrane domain ITG12_05540 PF06610 L-alanine exporter ITG12_05545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_05545 PF00512 His Kinase A (phospho-acceptor) domain ITG12_05545 PF00072 Response regulator receiver domain ITG12_05545 PF09308 LuxQ, periplasmic ITG12_05555 PF03738 Glutathionylspermidine synthase preATP-grasp ITG12_05565 PF03994 Domain of Unknown Function (DUF350) ITG12_05575 PF02445 Quinolinate synthetase A protein ITG12_05580 PF16331 TolA binding protein trimerisation ITG12_05580 PF13174 Tetratricopeptide repeat ITG12_05585 PF00691 OmpA family ITG12_05590 PF04052 TolB amino-terminal domain ITG12_05590 PF07676 WD40-like Beta Propeller Repeat ITG12_05600 PF02472 Biopolymer transport protein ExbD/TolR ITG12_05605 PF01618 MotA/TolQ/ExbB proton channel family ITG12_05610 PF03061 Thioesterase superfamily ITG12_05620 PF08173 Membrane bound YbgT-like protein ITG12_05625 PF02322 Cytochrome bd terminal oxidase subunit II ITG12_05630 PF01654 Cytochrome bd terminal oxidase subunit I ITG12_05635 PF17864 RuvB AAA lid domain ITG12_05635 PF05491 RuvB C-terminal winged helix domain ITG12_05635 PF05496 Holliday junction DNA helicase RuvB P-loop domain ITG12_05640 PF01330 RuvA N terminal domain ITG12_05640 PF07499 RuvA, C-terminal domain ITG12_05645 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG12_05645 PF02203 Tar ligand binding domain homologue ITG12_05645 PF00672 HAMP domain ITG12_05650 PF02075 Crossover junction endodeoxyribonuclease RuvC ITG12_05655 PF01709 Transcriptional regulator ITG12_05660 PF00152 tRNA synthetases class II (D, K and N) ITG12_05660 PF02938 GAD domain ITG12_05660 PF01336 OB-fold nucleic acid binding domain ITG12_05665 PF01904 Protein of unknown function DUF72 ITG12_05670 PF13649 Methyltransferase domain ITG12_05675 PF08003 Protein of unknown function (DUF1698) ITG12_05680 PF08443 RimK-like ATP-grasp domain ITG12_05680 PF18030 RimK PreATP-grasp domain ITG12_05700 PF05199 GMC oxidoreductase ITG12_05700 PF00732 GMC oxidoreductase ITG12_05705 PF00501 AMP-binding enzyme ITG12_05705 PF13193 AMP-binding enzyme C-terminal domain ITG12_05710 PF00171 Aldehyde dehydrogenase family ITG12_05715 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ITG12_05715 PF12833 Helix-turn-helix domain ITG12_05720 PF04310 MukB N-terminal ITG12_05720 PF16330 MukB hinge domain ITG12_05725 PF04288 MukE-like family ITG12_05730 PF03882 MukF winged-helix domain ITG12_05730 PF17193 MukF C-terminal domain ITG12_05730 PF17192 MukF middle domain ITG12_05735 PF13847 Methyltransferase domain ITG12_05740 PF02698 DUF218 domain ITG12_05745 PF00072 Response regulator receiver domain ITG12_05745 PF00486 Transcriptional regulatory protein, C terminal ITG12_05750 PF02613 Nitrate reductase delta subunit ITG12_05755 PF00356 Bacterial regulatory proteins, lacI family ITG12_05760 PF04993 TfoX N-terminal domain ITG12_05760 PF04994 TfoX C-terminal domain ITG12_05780 PF00534 Glycosyl transferases group 1 ITG12_05780 PF08323 Starch synthase catalytic domain ITG12_05785 PF00483 Nucleotidyl transferase ITG12_05790 PF01131 DNA topoisomerase ITG12_05790 PF01396 Topoisomerase DNA binding C4 zinc finger ITG12_05790 PF08272 Topoisomerase I zinc-ribbon-like ITG12_05790 PF01751 Toprim domain ITG12_05795 PF10692 Protein of unknown function (DUF2498) ITG12_05800 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ITG12_05810 PF03588 Leucyl/phenylalanyl-tRNA protein transferase ITG12_05815 PF04377 Arginine-tRNA-protein transferase, C terminus ITG12_05815 PF04376 Arginine-tRNA-protein transferase, N terminus ITG12_05820 PF01176 Translation initiation factor 1A / IF-1 ITG12_05825 PF07724 AAA domain (Cdc48 subfamily) ITG12_05825 PF10431 C-terminal, D2-small domain, of ClpB protein ITG12_05825 PF02861 Clp amino terminal domain, pathogenicity island component ITG12_05825 PF17871 AAA lid domain ITG12_05825 PF00004 ATPase family associated with various cellular activities (AAA) ITG12_05830 PF02617 ATP-dependent Clp protease adaptor protein ClpS ITG12_05835 PF00313 'Cold-shock' DNA-binding domain ITG12_05840 PF03971 Monomeric isocitrate dehydrogenase ITG12_05845 PF00849 RNA pseudouridylate synthase ITG12_05850 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) ITG12_05855 PF13609 Gram-negative porin ITG12_05860 PF13307 Helicase C-terminal domain ITG12_05860 PF06733 DEAD_2 ITG12_05865 PF01925 Sulfite exporter TauE/SafE ITG12_05870 PF07445 Primosomal replication protein priC ITG12_05875 PF10689 Protein of unknown function (DUF2496) ITG12_05880 PF03372 Endonuclease/Exonuclease/phosphatase family ITG12_05885 PF00664 ABC transporter transmembrane region ITG12_05885 PF00005 ABC transporter ITG12_05890 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ITG12_05890 PF00529 HlyD membrane-fusion protein of T1SS ITG12_05900 PF00528 Binding-protein-dependent transport system inner membrane component ITG12_05905 PF00528 Binding-protein-dependent transport system inner membrane component ITG12_05910 PF00497 Bacterial extracellular solute-binding proteins, family 3 ITG12_05915 PF00005 ABC transporter ITG12_05930 PF01228 Glycine radical ITG12_05930 PF02901 Pyruvate formate lyase-like ITG12_05940 PF04055 Radical SAM superfamily ITG12_05950 PF03887 YfbU domain ITG12_05955 PF08298 PrkA AAA domain ITG12_05955 PF06798 PrkA serine protein kinase C-terminal domain ITG12_05960 PF04285 Protein of unknown function (DUF444) ITG12_05965 PF04293 SpoVR like protein ITG12_05970 PF02348 Cytidylyltransferase ITG12_05975 PF03966 Trm112p-like protein ITG12_05980 PF02606 Tetraacyldisaccharide-1-P 4'-kinase ITG12_05985 PF00664 ABC transporter transmembrane region ITG12_05985 PF00005 ABC transporter ITG12_05990 PF03772 Competence protein ITG12_05990 PF00753 Metallo-beta-lactamase superfamily ITG12_05990 PF13567 Domain of unknown function (DUF4131) ITG12_06000 PF02687 FtsX-like permease family ITG12_06000 PF12704 MacB-like periplasmic core domain ITG12_06005 PF00005 ABC transporter ITG12_06010 PF02687 FtsX-like permease family ITG12_06010 PF12704 MacB-like periplasmic core domain ITG12_06020 PF02559 CarD-like/TRCF domain ITG12_06020 PF00270 DEAD/DEAH box helicase ITG12_06020 PF00271 Helicase conserved C-terminal domain ITG12_06020 PF03461 TRCF domain ITG12_06020 PF17757 UvrB interaction domain ITG12_06035 PF07992 Pyridine nucleotide-disulphide oxidoreductase ITG12_06040 PF05728 Uncharacterised protein family (UPF0227) ITG12_06050 PF13036 Peptidoglycan-synthase activator LpoB ITG12_06050 PF08139 Prokaryotic membrane lipoprotein lipid attachment site ITG12_06065 PF01230 HIT domain ITG12_06070 PF00672 HAMP domain ITG12_06070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG12_06080 PF01048 Phosphorylase superfamily ITG12_06085 PF00403 Heavy-metal-associated domain ITG12_06090 PF01554 MatE ITG12_06095 PF00478 IMP dehydrogenase / GMP reductase domain ITG12_06095 PF00571 CBS domain ITG12_06105 PF11953 Domain of unknown function (DUF3470) ITG12_06105 PF00037 4Fe-4S binding domain ITG12_06110 PF08032 RNA 2'-O ribose methyltransferase substrate binding ITG12_06110 PF00588 SpoU rRNA Methylase family ITG12_06115 PF00689 Cation transporting ATPase, C-terminus ITG12_06115 PF00690 Cation transporter/ATPase, N-terminus ITG12_06125 PF00990 Diguanylate cyclase, GGDEF domain ITG12_06125 PF17152 Periplasmic sensor domain ITG12_06135 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ITG12_06140 PF09619 Type III secretion system lipoprotein chaperone (YscW) ITG12_06155 PF13404 AsnC-type helix-turn-helix domain ITG12_06155 PF01037 Lrp/AsnC ligand binding domain ITG12_06160 PF00291 Pyridoxal-phosphate dependent enzyme ITG12_06185 PF00873 AcrB/AcrD/AcrF family ITG12_06190 PF13533 Biotin-lipoyl like ITG12_06235 PF07690 Major Facilitator Superfamily ITG12_06240 PF03601 Conserved hypothetical protein 698 ITG12_06250 PF03466 LysR substrate binding domain ITG12_06250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_06255 PF02378 Phosphotransferase system, EIIC ITG12_06255 PF00367 phosphotransferase system, EIIB ITG12_06255 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ITG12_06260 PF13193 AMP-binding enzyme C-terminal domain ITG12_06260 PF00501 AMP-binding enzyme ITG12_06265 PF13378 Enolase C-terminal domain-like ITG12_06270 PF00378 Enoyl-CoA hydratase/isomerase ITG12_06275 PF12697 Alpha/beta hydrolase family ITG12_06280 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ITG12_06280 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ITG12_06280 PF16582 Middle domain of thiamine pyrophosphate ITG12_06285 PF00425 chorismate binding enzyme ITG12_06290 PF00155 Aminotransferase class I and II ITG12_06300 PF01966 HD domain ITG12_06300 PF13286 Phosphohydrolase-associated domain ITG12_06320 PF13145 PPIC-type PPIASE domain ITG12_06325 PF00216 Bacterial DNA-binding protein ITG12_06330 PF00004 ATPase family associated with various cellular activities (AAA) ITG12_06330 PF05362 Lon protease (S16) C-terminal proteolytic domain ITG12_06330 PF02190 ATP-dependent protease La (LON) substrate-binding domain ITG12_06335 PF07724 AAA domain (Cdc48 subfamily) ITG12_06335 PF10431 C-terminal, D2-small domain, of ClpB protein ITG12_06335 PF06689 ClpX C4-type zinc finger ITG12_06340 PF00574 Clp protease ITG12_06345 PF05697 Bacterial trigger factor protein (TF) ITG12_06345 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ITG12_06345 PF05698 Bacterial trigger factor protein (TF) C-terminus ITG12_06350 PF02743 Cache domain ITG12_06350 PF00512 His Kinase A (phospho-acceptor) domain ITG12_06350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_06355 PF02954 Bacterial regulatory protein, Fis family ITG12_06355 PF00072 Response regulator receiver domain ITG12_06355 PF00158 Sigma-54 interaction domain ITG12_06360 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ITG12_06365 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ITG12_06370 PF03480 Bacterial extracellular solute-binding protein, family 7 ITG12_06375 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ITG12_06390 PF02386 Cation transport protein ITG12_06395 PF02254 TrkA-N domain ITG12_06395 PF02080 TrkA-C domain ITG12_06400 PF02028 BCCT, betaine/carnitine/choline family transporter ITG12_06405 PF00270 DEAD/DEAH box helicase ITG12_06405 PF00271 Helicase conserved C-terminal domain ITG12_06410 PF00571 CBS domain ITG12_06410 PF03471 Transporter associated domain ITG12_06410 PF01595 Cyclin M transmembrane N-terminal domain ITG12_06415 PF07715 TonB-dependent Receptor Plug Domain ITG12_06415 PF00593 TonB dependent receptor ITG12_06430 PF00975 Thioesterase domain ITG12_06430 PF00975 Thioesterase domain ITG12_06430 PF00668 Condensation domain ITG12_06430 PF00550 Phosphopantetheine attachment site ITG12_06430 PF00550 Phosphopantetheine attachment site ITG12_06430 PF13193 AMP-binding enzyme C-terminal domain ITG12_06430 PF00501 AMP-binding enzyme ITG12_06430 PF00668 Condensation domain ITG12_06430 PF00501 AMP-binding enzyme ITG12_06430 PF13193 AMP-binding enzyme C-terminal domain ITG12_06435 PF00550 Phosphopantetheine attachment site ITG12_06435 PF00857 Isochorismatase family ITG12_06440 PF00501 AMP-binding enzyme ITG12_06440 PF13193 AMP-binding enzyme C-terminal domain ITG12_06445 PF00425 chorismate binding enzyme ITG12_06465 PF04143 Sulphur transport ITG12_06545 PF04820 Tryptophan halogenase ITG12_06570 PF00550 Phosphopantetheine attachment site ITG12_06575 PF00550 Phosphopantetheine attachment site ITG12_06585 PF16177 Acetyl-coenzyme A synthetase N-terminus ITG12_06585 PF00501 AMP-binding enzyme ITG12_06585 PF13193 AMP-binding enzyme C-terminal domain ITG12_06595 PF00535 Glycosyl transferase family 2 ITG12_06600 PF00221 Aromatic amino acid lyase ITG12_06625 PF00109 Beta-ketoacyl synthase, N-terminal domain ITG12_06625 PF02801 Beta-ketoacyl synthase, C-terminal domain ITG12_06630 PF07977 FabA-like domain ITG12_06640 PF00109 Beta-ketoacyl synthase, N-terminal domain ITG12_06640 PF02801 Beta-ketoacyl synthase, C-terminal domain ITG12_06650 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ITG12_06650 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ITG12_06655 PF04480 Protein of unknown function (DUF559) ITG12_06660 PF07670 Nucleoside recognition ITG12_06660 PF07662 Na+ dependent nucleoside transporter C-terminus ITG12_06660 PF01773 Na+ dependent nucleoside transporter N-terminus ITG12_06665 PF03466 LysR substrate binding domain ITG12_06665 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_06670 PF13406 Transglycosylase SLT domain ITG12_06675 PF05166 YcgL domain ITG12_06680 PF05209 Septum formation inhibitor MinC, N-terminal domain ITG12_06680 PF03775 Septum formation inhibitor MinC, C-terminal domain ITG12_06685 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ITG12_06690 PF03776 Septum formation topological specificity factor MinE ITG12_06695 PF01612 3'-5' exonuclease ITG12_06695 PF00570 HRDC domain ITG12_06700 PF00501 AMP-binding enzyme ITG12_06700 PF13193 AMP-binding enzyme C-terminal domain ITG12_06705 PF00561 alpha/beta hydrolase fold ITG12_06710 PF03843 Outer membrane lipoprotein Slp family ITG12_06720 PF00814 Glycoprotease family ITG12_06725 PF04851 Type III restriction enzyme, res subunit ITG12_06725 PF13307 Helicase C-terminal domain ITG12_06730 PF01842 ACT domain ITG12_06730 PF00551 Formyl transferase ITG12_06735 PF06185 YecM protein ITG12_06740 PF03485 Arginyl tRNA synthetase N terminal domain ITG12_06740 PF05746 DALR anticodon binding domain ITG12_06740 PF00750 tRNA synthetases class I (R) ITG12_06760 PF17910 FeoB cytosolic helical domain ITG12_06760 PF07670 Nucleoside recognition ITG12_06760 PF07664 Ferrous iron transport protein B C terminus ITG12_06760 PF02421 Ferrous iron transport protein B ITG12_06765 PF04023 FeoA domain ITG12_06770 PF02311 AraC-like ligand binding domain ITG12_06770 PF12833 Helix-turn-helix domain ITG12_06775 PF01297 Zinc-uptake complex component A periplasmic ITG12_06780 PF00005 ABC transporter ITG12_06785 PF00950 ABC 3 transport family ITG12_06790 PF00665 Integrase core domain ITG12_06790 PF13333 Integrase core domain ITG12_06790 PF13276 HTH-like domain ITG12_06805 PF02629 CoA binding domain ITG12_06805 PF00549 CoA-ligase ITG12_06810 PF08442 ATP-grasp domain ITG12_06810 PF00549 CoA-ligase ITG12_06815 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ITG12_06815 PF02817 e3 binding domain ITG12_06815 PF00364 Biotin-requiring enzyme ITG12_06820 PF00676 Dehydrogenase E1 component ITG12_06820 PF02779 Transketolase, pyrimidine binding domain ITG12_06820 PF16078 2-oxoglutarate dehydrogenase N-terminus ITG12_06820 PF16870 2-oxoglutarate dehydrogenase C-terminal ITG12_06825 PF13085 2Fe-2S iron-sulfur cluster binding domain ITG12_06830 PF00890 FAD binding domain ITG12_06830 PF02910 Fumarate reductase flavoprotein C-term ITG12_06835 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ITG12_06840 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ITG12_06845 PF00285 Citrate synthase, C-terminal domain ITG12_06850 PF01784 NIF3 (NGG1p interacting factor 3) ITG12_06860 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ITG12_06860 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ITG12_06860 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ITG12_06860 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ITG12_06865 PF03925 SeqA protein C-terminal domain ITG12_06865 PF17206 SeqA protein N-terminal domain ITG12_06870 PF12697 Alpha/beta hydrolase family ITG12_06880 PF00258 Flavodoxin ITG12_06890 PF01475 Ferric uptake regulator family ITG12_06895 PF07963 Prokaryotic N-terminal methylation motif ITG12_06900 PF00749 tRNA synthetases class I (E and Q), catalytic domain ITG12_06900 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain ITG12_06905 PF00367 phosphotransferase system, EIIB ITG12_06905 PF02378 Phosphotransferase system, EIIC ITG12_06905 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ITG12_06910 PF01979 Amidohydrolase family ITG12_06915 PF01047 MarR family ITG12_06915 PF00480 ROK family ITG12_06920 PF00999 Sodium/hydrogen exchanger family ITG12_06920 PF02254 TrkA-N domain ITG12_06925 PF00733 Asparagine synthase ITG12_06925 PF13537 Glutamine amidotransferase domain ITG12_06930 PF02357 Transcription termination factor nusG ITG12_06935 PF00854 POT family ITG12_06940 PF00762 Ferrochelatase ITG12_06945 PF05191 Adenylate kinase, active site lid ITG12_06950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_06950 PF00183 Hsp90 protein ITG12_06955 PF00486 Transcriptional regulatory protein, C terminal ITG12_06960 PF17323 Trans-membrane regulatory protein ToxS ITG12_06975 PF12850 Calcineurin-like phosphoesterase superfamily domain ITG12_06990 PF07556 Protein of unknown function (DUF1538) ITG12_06995 PF07556 Protein of unknown function (DUF1538) ITG12_07000 PF08338 Domain of unknown function (DUF1731) ITG12_07000 PF01370 NAD dependent epimerase/dehydratase family ITG12_07005 PF00106 short chain dehydrogenase ITG12_07010 PF00085 Thioredoxin ITG12_07015 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) ITG12_07020 PF01270 Glycosyl hydrolases family 8 ITG12_07025 PF03170 Bacterial cellulose synthase subunit ITG12_07030 PF03552 Cellulose synthase ITG12_07030 PF00535 Glycosyl transferase family 2 ITG12_07030 PF07238 PilZ domain ITG12_07035 PF06564 Cellulose biosynthesis protein BcsQ ITG12_07055 PF11658 Cellulose biosynthesis protein BcsG ITG12_07060 PF16200 C-terminal region of band_7 ITG12_07060 PF01145 SPFH domain / Band 7 family ITG12_07075 PF03573 outer membrane porin, OprD family ITG12_07080 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ITG12_07080 PF12826 Helix-hairpin-helix motif ITG12_07080 PF00533 BRCA1 C Terminus (BRCT) domain ITG12_07080 PF03120 NAD-dependent DNA ligase OB-fold domain ITG12_07080 PF01653 NAD-dependent DNA ligase adenylation domain ITG12_07085 PF04354 ZipA, C-terminal FtsZ-binding domain ITG12_07095 PF00291 Pyridoxal-phosphate dependent enzyme ITG12_07100 PF00381 PTS HPr component phosphorylation site ITG12_07105 PF00391 PEP-utilising enzyme, mobile domain ITG12_07105 PF05524 PEP-utilising enzyme, N-terminal ITG12_07105 PF02896 PEP-utilising enzyme, TIM barrel domain ITG12_07110 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ITG12_07115 PF00669 Bacterial flagellin N-terminal helical region ITG12_07115 PF00700 Bacterial flagellin C-terminal helical region ITG12_07115 PF07196 Flagellin hook IN motif ITG12_07120 PF00872 Transposase, Mutator family ITG12_07130 PF00700 Bacterial flagellin C-terminal helical region ITG12_07130 PF07196 Flagellin hook IN motif ITG12_07130 PF00669 Bacterial flagellin N-terminal helical region ITG12_07135 PF00700 Bacterial flagellin C-terminal helical region ITG12_07135 PF07196 Flagellin hook IN motif ITG12_07135 PF00669 Bacterial flagellin N-terminal helical region ITG12_07145 PF07196 Flagellin hook IN motif ITG12_07145 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ITG12_07150 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ITG12_07150 PF10135 Rod binding protein ITG12_07155 PF02119 Flagellar P-ring protein ITG12_07160 PF02107 Flagellar L-ring protein ITG12_07165 PF00460 Flagella basal body rod protein ITG12_07165 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ITG12_07170 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ITG12_07170 PF00460 Flagella basal body rod protein ITG12_07175 PF00460 Flagella basal body rod protein ITG12_07175 PF07559 Flagellar basal body protein FlaE ITG12_07175 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ITG12_07180 PF03963 Flagellar hook capping protein - N-terminal region ITG12_07180 PF13861 FlgD Tudor-like domain ITG12_07180 PF13860 FlgD Ig-like domain ITG12_07185 PF00460 Flagella basal body rod protein ITG12_07185 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ITG12_07190 PF00460 Flagella basal body rod protein ITG12_07195 PF03705 CheR methyltransferase, all-alpha domain ITG12_07195 PF01739 CheR methyltransferase, SAM binding domain ITG12_07200 PF01584 CheW-like domain ITG12_07200 PF00072 Response regulator receiver domain ITG12_07245 PF00691 OmpA family ITG12_07245 PF01389 OmpA-like transmembrane domain ITG12_07250 PF00749 tRNA synthetases class I (E and Q), catalytic domain ITG12_07255 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) ITG12_07260 PF13609 Gram-negative porin ITG12_07265 PF00403 Heavy-metal-associated domain ITG12_07280 PF00728 Glycosyl hydrolase family 20, catalytic domain ITG12_07280 PF03173 Putative carbohydrate binding domain ITG12_07280 PF02838 Glycosyl hydrolase family 20, domain 2 ITG12_07280 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain ITG12_07310 PF00849 RNA pseudouridylate synthase ITG12_07310 PF01479 S4 domain ITG12_07315 PF04073 Aminoacyl-tRNA editing domain ITG12_07325 PF00793 DAHP synthetase I family ITG12_07330 PF13369 Transglutaminase-like superfamily ITG12_07335 PF04247 Invasion gene expression up-regulator, SirB ITG12_07340 PF17827 PrmC N-terminal domain ITG12_07340 PF13847 Methyltransferase domain ITG12_07345 PF00472 RF-1 domain ITG12_07345 PF03462 PCRF domain ITG12_07350 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ITG12_07350 PF01488 Shikimate / quinate 5-dehydrogenase ITG12_07350 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ITG12_07355 PF03550 Outer membrane lipoprotein LolB ITG12_07360 PF08544 GHMP kinases C terminal ITG12_07360 PF00288 GHMP kinases N terminal domain ITG12_07365 PF14572 Phosphoribosyl synthetase-associated domain ITG12_07365 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ITG12_07370 PF01195 Peptidyl-tRNA hydrolase ITG12_07375 PF01926 50S ribosome-binding GTPase ITG12_07375 PF06071 Protein of unknown function (DUF933) ITG12_07480 PF01494 FAD binding domain ITG12_07485 PF04055 Radical SAM superfamily ITG12_07485 PF01938 TRAM domain ITG12_07485 PF00919 Uncharacterized protein family UPF0004 ITG12_07490 PF02562 PhoH-like protein ITG12_07495 PF02130 Uncharacterized protein family UPF0054 ITG12_07500 PF03471 Transporter associated domain ITG12_07500 PF00571 CBS domain ITG12_07505 PF00795 Carbon-nitrogen hydrolase ITG12_07510 PF07295 Zinc-ribbon containing domain ITG12_07515 PF00133 tRNA synthetases class I (I, L, M and V) ITG12_07515 PF13603 Leucyl-tRNA synthetase, Domain 2 ITG12_07515 PF08264 Anticodon-binding domain of tRNA ITG12_07520 PF04390 Lipopolysaccharide-assembly ITG12_07525 PF14840 Processivity clamp loader gamma complex DNA pol III C-term ITG12_07525 PF06144 DNA polymerase III, delta subunit ITG12_07535 PF02590 Predicted SPOUT methyltransferase ITG12_07540 PF03717 Penicillin-binding Protein dimerisation domain ITG12_07540 PF00905 Penicillin binding protein transpeptidase domain ITG12_07545 PF01098 Cell cycle protein ITG12_07550 PF03330 Lytic transglycolase ITG12_07550 PF05036 Sporulation related domain ITG12_07555 PF07943 Penicillin-binding protein 5, C-terminal domain ITG12_07555 PF00768 D-alanyl-D-alanine carboxypeptidase ITG12_07560 PF04359 Protein of unknown function (DUF493) ITG12_07565 PF03099 Biotin/lipoate A/B protein ligase family ITG12_07570 PF04055 Radical SAM superfamily ITG12_07570 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ITG12_07575 PF00464 Serine hydroxymethyltransferase ITG12_07580 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ITG12_07580 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ITG12_07595 PF00128 Alpha amylase, catalytic domain ITG12_07595 PF16657 Maltogenic Amylase, C-terminal domain ITG12_07600 PF00367 phosphotransferase system, EIIB ITG12_07600 PF02378 Phosphotransferase system, EIIC ITG12_07605 PF00356 Bacterial regulatory proteins, lacI family ITG12_07615 PF09383 NIL domain ITG12_07615 PF00005 ABC transporter ITG12_07620 PF00528 Binding-protein-dependent transport system inner membrane component ITG12_07625 PF03180 NLPA lipoprotein ITG12_07635 PF00149 Calcineurin-like phosphoesterase ITG12_07635 PF02872 5'-nucleotidase, C-terminal domain ITG12_07640 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) ITG12_07645 PF07348 Syd protein (SUKH-2) ITG12_07650 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term ITG12_07650 PF14489 QueF-like protein ITG12_07660 PF00990 Diguanylate cyclase, GGDEF domain ITG12_07665 PF03641 Possible lysine decarboxylase ITG12_07665 PF11892 Domain of unknown function (DUF3412) ITG12_07665 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases ITG12_07670 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ITG12_07670 PF01367 5'-3' exonuclease, C-terminal SAM fold ITG12_07675 PF18125 RlmM ferredoxin-like domain ITG12_07675 PF01728 FtsJ-like methyltransferase ITG12_07680 PF04241 Protein of unknown function (DUF423) ITG12_07690 PF03466 LysR substrate binding domain ITG12_07690 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_07695 PF02926 THUMP domain ITG12_07695 PF02568 Thiamine biosynthesis protein (ThiI) ITG12_07700 PF00691 OmpA family ITG12_07700 PF13677 Membrane MotB of proton-channel complex MotA/MotB ITG12_07700 PF00691 OmpA family ITG12_07700 PF13677 Membrane MotB of proton-channel complex MotA/MotB ITG12_07705 PF01618 MotA/TolQ/ExbB proton channel family ITG12_07710 PF02609 Exonuclease VII small subunit ITG12_07715 PF00348 Polyprenyl synthetase ITG12_07720 PF02779 Transketolase, pyrimidine binding domain ITG12_07720 PF02780 Transketolase, C-terminal domain ITG12_07720 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ITG12_07725 PF04608 Phosphatidylglycerophosphatase A ITG12_07730 PF00586 AIR synthase related protein, N-terminal domain ITG12_07730 PF02769 AIR synthase related protein, C-terminal domain ITG12_07735 PF01029 NusB family ITG12_07740 PF00885 6,7-dimethyl-8-ribityllumazine synthase ITG12_07745 PF00925 GTP cyclohydrolase II ITG12_07745 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ITG12_07750 PF00677 Lumazine binding domain ITG12_07755 PF01872 RibD C-terminal domain ITG12_07755 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ITG12_07760 PF03477 ATP cone domain ITG12_07765 PF00171 Aldehyde dehydrogenase family ITG12_07770 PF00696 Amino acid kinase family ITG12_07770 PF01472 PUA domain ITG12_07775 PF07417 Sigma factor-binding transcriptional regulator Crl ITG12_07780 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) ITG12_07785 PF00156 Phosphoribosyl transferase domain ITG12_07790 PF00860 Permease family ITG12_07795 PF01546 Peptidase family M20/M25/M40 ITG12_07795 PF07687 Peptidase dimerisation domain ITG12_07810 PF00593 TonB dependent receptor ITG12_07810 PF07715 TonB-dependent Receptor Plug Domain ITG12_07825 PF02769 AIR synthase related protein, C-terminal domain ITG12_07825 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal ITG12_07825 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ITG12_07830 PF00497 Bacterial extracellular solute-binding proteins, family 3 ITG12_07830 PF01464 Transglycosylase SLT domain ITG12_07835 PF14437 MafB19-like deaminase ITG12_07840 PF03806 AbgT putative transporter family ITG12_07860 PF00114 Pilin (bacterial filament) ITG12_07860 PF07963 Prokaryotic N-terminal methylation motif ITG12_07865 PF00114 Pilin (bacterial filament) ITG12_07865 PF07963 Prokaryotic N-terminal methylation motif ITG12_07870 PF00226 DnaJ domain ITG12_07870 PF00684 DnaJ central domain ITG12_07870 PF01556 DnaJ C terminal domain ITG12_07875 PF00012 Hsp70 protein ITG12_07880 PF00375 Sodium:dicarboxylate symporter family ITG12_07885 PF01025 GrpE ITG12_07890 PF01513 ATP-NAD kinase ITG12_07900 PF02463 RecF/RecN/SMC N terminal domain ITG12_07910 PF04355 SmpA / OmlA family ITG12_07920 PF03658 RnfH family Ubiquitin ITG12_07925 PF03364 Polyketide cyclase / dehydrase and lipid transport ITG12_07930 PF01668 SmpB protein ITG12_07940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_07940 PF03466 LysR substrate binding domain ITG12_07945 PF12805 FUSC-like inner membrane protein yccS ITG12_07965 PF00202 Aminotransferase class-III ITG12_07970 PF01053 Cys/Met metabolism PLP-dependent enzyme ITG12_07975 PF00924 Mechanosensitive ion channel ITG12_07990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_07990 PF03466 LysR substrate binding domain ITG12_07995 PF01266 FAD dependent oxidoreductase ITG12_08000 PF01235 Sodium:alanine symporter family ITG12_08005 PF01184 GPR1/FUN34/yaaH family ITG12_08010 PF00704 Glycosyl hydrolases family 18 ITG12_08010 PF06483 Chitinase C ITG12_08015 PF03553 Na+/H+ antiporter family ITG12_08020 PF00117 Glutamine amidotransferase class-I ITG12_08020 PF00958 GMP synthase C terminal domain ITG12_08020 PF02540 NAD synthase ITG12_08025 PF00571 CBS domain ITG12_08025 PF00478 IMP dehydrogenase / GMP reductase domain ITG12_08030 PF02601 Exonuclease VII, large subunit ITG12_08030 PF13742 OB-fold nucleic acid binding domain ITG12_08040 PF13185 GAF domain ITG12_08040 PF00990 Diguanylate cyclase, GGDEF domain ITG12_08050 PF01926 50S ribosome-binding GTPase ITG12_08050 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ITG12_08055 PF13360 PQQ-like domain ITG12_08060 PF09976 Tetratricopeptide repeat-like domain ITG12_08065 PF03129 Anticodon binding domain ITG12_08065 PF13393 Histidyl-tRNA synthetase ITG12_08070 PF04551 GcpE protein ITG12_08075 PF13464 Domain of unknown function (DUF4115) ITG12_08080 PF04055 Radical SAM superfamily ITG12_08085 PF00334 Nucleoside diphosphate kinase ITG12_08090 PF12404 Peptidase ITG12_08090 PF00883 Cytosol aminopeptidase family, catalytic domain ITG12_08095 PF04384 Iron-sulphur cluster assembly ITG12_08100 PF00111 2Fe-2S iron-sulfur cluster binding domain ITG12_08105 PF00012 Hsp70 protein ITG12_08110 PF07743 HSCB C-terminal oligomerisation domain ITG12_08110 PF00226 DnaJ domain ITG12_08115 PF01521 Iron-sulphur cluster biosynthesis ITG12_08120 PF01592 NifU-like N terminal domain ITG12_08125 PF00266 Aminotransferase class-V ITG12_08130 PF02082 Transcriptional regulator ITG12_08135 PF00588 SpoU rRNA Methylase family ITG12_08140 PF00459 Inositol monophosphatase family ITG12_08155 PF07549 SecD/SecF GG Motif ITG12_08155 PF02355 Protein export membrane protein ITG12_08160 PF07549 SecD/SecF GG Motif ITG12_08160 PF13721 SecD export protein N-terminal TM region ITG12_08160 PF02355 Protein export membrane protein ITG12_08165 PF02699 Preprotein translocase subunit ITG12_08170 PF01702 Queuine tRNA-ribosyltransferase ITG12_08175 PF02547 Queuosine biosynthesis protein ITG12_08190 PF00571 CBS domain ITG12_08195 PF00463 Isocitrate lyase family ITG12_08200 PF01274 Malate synthase ITG12_08205 PF03466 LysR substrate binding domain ITG12_08205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_08210 PF10417 C-terminal domain of 1-Cys peroxiredoxin ITG12_08210 PF00578 AhpC/TSA family ITG12_08215 PF03932 CutC family ITG12_08220 PF03976 Polyphosphate kinase 2 (PPK2) ITG12_08225 PF03466 LysR substrate binding domain ITG12_08225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_08240 PF01895 PhoU domain ITG12_08245 PF00005 ABC transporter ITG12_08250 PF00528 Binding-protein-dependent transport system inner membrane component ITG12_08255 PF00528 Binding-protein-dependent transport system inner membrane component ITG12_08260 PF02503 Polyphosphate kinase middle domain ITG12_08260 PF13090 Polyphosphate kinase C-terminal domain 2 ITG12_08260 PF17941 Polyphosphate kinase C-terminal domain 1 ITG12_08260 PF13089 Polyphosphate kinase N-terminal domain ITG12_08265 PF02541 Ppx/GppA phosphatase family ITG12_08270 PF12849 PBP superfamily domain ITG12_08275 PF11808 Phosphate regulon sensor protein PhoR ITG12_08275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_08275 PF00512 His Kinase A (phospho-acceptor) domain ITG12_08275 PF00989 PAS fold ITG12_08280 PF00486 Transcriptional regulatory protein, C terminal ITG12_08280 PF00072 Response regulator receiver domain ITG12_08285 PF04381 Putative exonuclease, RdgC ITG12_08290 PF01136 Peptidase family U32 ITG12_08290 PF16325 Peptidase family U32 C-terminal domain ITG12_08295 PF00037 4Fe-4S binding domain ITG12_08305 PF03411 Penicillin-insensitive murein endopeptidase ITG12_08350 PF07724 AAA domain (Cdc48 subfamily) ITG12_08350 PF00004 ATPase family associated with various cellular activities (AAA) ITG12_08350 PF17871 AAA lid domain ITG12_08350 PF02861 Clp amino terminal domain, pathogenicity island component ITG12_08350 PF10431 C-terminal, D2-small domain, of ClpB protein ITG12_08355 PF02578 Multi-copper polyphenol oxidoreductase laccase ITG12_08360 PF01479 S4 domain ITG12_08360 PF00849 RNA pseudouridylate synthase ITG12_08365 PF13525 Outer membrane lipoprotein ITG12_08370 PF01464 Transglycosylase SLT domain ITG12_08375 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ITG12_08380 PF00800 Prephenate dehydratase ITG12_08380 PF01817 Chorismate mutase type II ITG12_08385 PF01931 Protein of unknown function DUF84 ITG12_08390 PF01371 Trp repressor protein ITG12_08395 PF01464 Transglycosylase SLT domain ITG12_08395 PF14718 Soluble lytic murein transglycosylase L domain ITG12_08400 PF00005 ABC transporter ITG12_08400 PF12848 ABC transporter ITG12_08405 PF07238 PilZ domain ITG12_08410 PF04225 Opacity-associated protein A LysM-like domain ITG12_08410 PF01551 Peptidase family M23 ITG12_08415 PF02153 Prephenate dehydrogenase ITG12_08415 PF01817 Chorismate mutase type II ITG12_08420 PF00793 DAHP synthetase I family ITG12_08425 PF00933 Glycosyl hydrolase family 3 N terminal domain ITG12_08430 PF03702 Anhydro-N-acetylmuramic acid kinase ITG12_08435 PF01380 SIS domain ITG12_08450 PF02554 Carbon starvation protein CstA ITG12_08455 PF06580 Histidine kinase ITG12_08455 PF07694 5TMR of 5TMR-LYT ITG12_08460 PF00072 Response regulator receiver domain ITG12_08460 PF04397 LytTr DNA-binding domain ITG12_08465 PF02401 LytB protein ITG12_08470 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ITG12_08475 PF01252 Signal peptidase (SPase) II ITG12_08480 PF08264 Anticodon-binding domain of tRNA ITG12_08480 PF00133 tRNA synthetases class I (I, L, M and V) ITG12_08480 PF06827 Zinc finger found in FPG and IleRS ITG12_08485 PF01687 Riboflavin kinase ITG12_08485 PF06574 FAD synthetase ITG12_08490 PF03023 Lipid II flippase MurJ ITG12_08495 PF01649 Ribosomal protein S20 ITG12_08500 PF01022 Bacterial regulatory protein, arsR family ITG12_08505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_08505 PF03466 LysR substrate binding domain ITG12_08510 PF02690 Na+/Pi-cotransporter ITG12_08515 PF00303 Thymidylate synthase ITG12_08520 PF01790 Prolipoprotein diacylglyceryl transferase ITG12_08525 PF01925 Sulfite exporter TauE/SafE ITG12_08530 PF05524 PEP-utilising enzyme, N-terminal ITG12_08530 PF00391 PEP-utilising enzyme, mobile domain ITG12_08530 PF02896 PEP-utilising enzyme, TIM barrel domain ITG12_08530 PF01590 GAF domain ITG12_08535 PF00293 NUDIX domain ITG12_08540 PF02976 DNA mismatch repair enzyme MutH ITG12_08550 PF00248 Aldo/keto reductase family ITG12_08560 PF02954 Bacterial regulatory protein, Fis family ITG12_08560 PF00072 Response regulator receiver domain ITG12_08560 PF00158 Sigma-54 interaction domain ITG12_08565 PF00152 tRNA synthetases class II (D, K and N) ITG12_08565 PF01336 OB-fold nucleic acid binding domain ITG12_08575 PF02272 DHHA1 domain ITG12_08575 PF01368 DHH family ITG12_08575 PF17768 RecJ OB domain ITG12_08580 PF13098 Thioredoxin-like domain ITG12_08580 PF10411 Disulfide bond isomerase protein N-terminus ITG12_08585 PF02899 Phage integrase, N-terminal SAM-like domain ITG12_08585 PF00589 Phage integrase family ITG12_08590 PF00258 Flavodoxin ITG12_08595 PF05525 Branched-chain amino acid transport protein ITG12_08600 PF05175 Methyltransferase small domain ITG12_08605 PF00270 DEAD/DEAH box helicase ITG12_08605 PF00271 Helicase conserved C-terminal domain ITG12_08615 PF03883 Peroxide stress protein YaaA ITG12_08620 PF01235 Sodium:alanine symporter family ITG12_08635 PF03167 Uracil DNA glycosylase superfamily ITG12_08640 PF01261 Xylose isomerase-like TIM barrel ITG12_08645 PF01228 Glycine radical ITG12_08650 PF03358 NADPH-dependent FMN reductase ITG12_08660 PF14821 Threonine synthase N terminus ITG12_08660 PF00291 Pyridoxal-phosphate dependent enzyme ITG12_08665 PF08544 GHMP kinases C terminal ITG12_08665 PF00288 GHMP kinases N terminal domain ITG12_08670 PF00696 Amino acid kinase family ITG12_08670 PF01842 ACT domain ITG12_08670 PF13840 ACT domain ITG12_08670 PF00742 Homoserine dehydrogenase ITG12_08670 PF03447 Homoserine dehydrogenase, NAD binding domain ITG12_08680 PF03737 Aldolase/RraA ITG12_08690 PF00072 Response regulator receiver domain ITG12_08690 PF00486 Transcriptional regulatory protein, C terminal ITG12_08700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_08700 PF00512 His Kinase A (phospho-acceptor) domain ITG12_08700 PF18415 Histidine kinase receptor ArcB trans-membrane domain ITG12_08700 PF01627 Hpt domain ITG12_08700 PF00989 PAS fold ITG12_08700 PF00072 Response regulator receiver domain ITG12_08705 PF00360 Phytochrome region ITG12_08705 PF00990 Diguanylate cyclase, GGDEF domain ITG12_08705 PF00563 EAL domain ITG12_08705 PF01590 GAF domain ITG12_08710 PF16199 Radical_SAM C-terminal domain ITG12_08710 PF04055 Radical SAM superfamily ITG12_08715 PF00310 Glutamine amidotransferases class-II ITG12_08715 PF01493 GXGXG motif ITG12_08715 PF01645 Conserved region in glutamate synthase ITG12_08715 PF04898 Glutamate synthase central domain ITG12_08720 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ITG12_08720 PF07992 Pyridine nucleotide-disulphide oxidoreductase ITG12_08725 PF01493 GXGXG motif ITG12_08725 PF01645 Conserved region in glutamate synthase ITG12_08725 PF04898 Glutamate synthase central domain ITG12_08725 PF00310 Glutamine amidotransferases class-II ITG12_08730 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ITG12_08730 PF07992 Pyridine nucleotide-disulphide oxidoreductase ITG12_08740 PF01048 Phosphorylase superfamily ITG12_08750 PF01497 Periplasmic binding protein ITG12_08755 PF03458 UPF0126 domain ITG12_08760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_08760 PF03466 LysR substrate binding domain ITG12_08765 PF01925 Sulfite exporter TauE/SafE ITG12_08775 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ITG12_08775 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ITG12_08775 PF02142 MGS-like domain ITG12_08780 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ITG12_08780 PF00117 Glutamine amidotransferase class-I ITG12_08785 PF01113 Dihydrodipicolinate reductase, N-terminus ITG12_08785 PF05173 Dihydrodipicolinate reductase, C-terminus ITG12_08790 PF00293 NUDIX domain ITG12_08795 PF02810 SEC-C motif ITG12_08795 PF07517 SecA DEAD-like domain ITG12_08795 PF01043 SecA preprotein cross-linking domain ITG12_08795 PF07516 SecA Wing and Scaffold domain ITG12_08805 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase ITG12_08810 PF12327 FtsZ family, C-terminal domain ITG12_08810 PF00091 Tubulin/FtsZ family, GTPase domain ITG12_08815 PF02491 SHS2 domain inserted in FTSA ITG12_08820 PF03799 Cell division protein FtsQ ITG12_08820 PF08478 POTRA domain, FtsQ-type ITG12_08825 PF08245 Mur ligase middle domain ITG12_08825 PF02875 Mur ligase family, glutamate ligase domain ITG12_08825 PF01225 Mur ligase family, catalytic domain ITG12_08830 PF04101 Glycosyltransferase family 28 C-terminal domain ITG12_08830 PF03033 Glycosyltransferase family 28 N-terminal domain ITG12_08835 PF01098 Cell cycle protein ITG12_08840 PF02875 Mur ligase family, glutamate ligase domain ITG12_08840 PF08245 Mur ligase middle domain ITG12_08845 PF00953 Glycosyl transferase family 4 ITG12_08845 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ITG12_08850 PF01225 Mur ligase family, catalytic domain ITG12_08850 PF02875 Mur ligase family, glutamate ligase domain ITG12_08850 PF08245 Mur ligase middle domain ITG12_08855 PF08245 Mur ligase middle domain ITG12_08855 PF01225 Mur ligase family, catalytic domain ITG12_08855 PF02875 Mur ligase family, glutamate ligase domain ITG12_08860 PF00905 Penicillin binding protein transpeptidase domain ITG12_08860 PF03717 Penicillin-binding Protein dimerisation domain ITG12_08865 PF04999 Cell division protein FtsL ITG12_08870 PF01795 MraW methylase family ITG12_08880 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ITG12_08885 PF04348 LppC putative lipoprotein ITG12_08890 PF02021 Uncharacterised protein family UPF0102 ITG12_08895 PF13580 SIS domain ITG12_08900 PF04972 BON domain ITG12_08905 PF04386 Stringent starvation protein B ITG12_08910 PF02798 Glutathione S-transferase, N-terminal domain ITG12_08910 PF00043 Glutathione S-transferase, C-terminal domain ITG12_08915 PF02167 Cytochrome C1 family ITG12_08920 PF00033 Cytochrome b/b6/petB ITG12_08920 PF00032 Cytochrome b(C-terminal)/b6/petD ITG12_08925 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal ITG12_08925 PF00355 Rieske [2Fe-2S] domain ITG12_08930 PF00380 Ribosomal protein S9/S16 ITG12_08935 PF00572 Ribosomal protein L13 ITG12_08940 PF03969 AFG1-like ATPase ITG12_08945 PF06295 Protein of unknown function (DUF1043) ITG12_08950 PF00595 PDZ domain ITG12_08955 PF13180 PDZ domain ITG12_08960 PF00521 DNA gyrase/topoisomerase IV, subunit A ITG12_08960 PF03989 DNA gyrase C-terminal domain, beta-propeller ITG12_08965 PF01751 Toprim domain ITG12_08965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_08965 PF00986 DNA gyrase B subunit, carboxyl terminus ITG12_08965 PF00204 DNA gyrase B ITG12_08970 PF05728 Uncharacterised protein family (UPF0227) ITG12_08975 PF00149 Calcineurin-like phosphoesterase ITG12_08980 PF06853 Protein of unknown function (DUF1249) ITG12_08985 PF00293 NUDIX domain ITG12_08990 PF02321 Outer membrane efflux protein ITG12_08995 PF01467 Cytidylyltransferase-like ITG12_08995 PF00294 pfkB family carbohydrate kinase ITG12_09000 PF03710 Glutamate-ammonia ligase adenylyltransferase ITG12_09000 PF08335 GlnD PII-uridylyltransferase ITG12_09005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG12_09005 PF00672 HAMP domain ITG12_09010 PF07885 Ion channel ITG12_09015 PF01928 CYTH domain ITG12_09020 PF01865 Protein of unknown function DUF47 ITG12_09025 PF01384 Phosphate transporter family ITG12_09030 PF08239 Bacterial SH3 domain ITG12_09045 PF01471 Putative peptidoglycan binding domain ITG12_09045 PF13401 AAA domain ITG12_09050 PF01966 HD domain ITG12_09050 PF12627 Probable RNA and SrmB- binding site of polymerase A ITG12_09050 PF01743 Poly A polymerase head domain ITG12_09055 PF02673 Bacitracin resistance protein BacA ITG12_09060 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ITG12_09065 PF02152 Dihydroneopterin aldolase ITG12_09070 PF02660 Glycerol-3-phosphate acyltransferase ITG12_09075 PF00561 alpha/beta hydrolase fold ITG12_09080 PF00814 Glycoprotease family ITG12_09085 PF01165 Ribosomal protein S21 ITG12_09090 PF09424 Yqey-like protein ITG12_09095 PF10410 DnaB-helicase binding domain of primase ITG12_09095 PF08275 DNA primase catalytic core, N-terminal domain ITG12_09095 PF01807 CHC2 zinc finger ITG12_09095 PF08278 DNA primase DnaG DnaB-binding ITG12_09100 PF04546 Sigma-70, non-essential region ITG12_09100 PF03979 Sigma-70 factor, region 1.1 ITG12_09100 PF00140 Sigma-70 factor, region 1.2 ITG12_09100 PF04542 Sigma-70 region 2 ITG12_09100 PF04539 Sigma-70 region 3 ITG12_09100 PF04545 Sigma-70, region 4 ITG12_09125 PF13333 Integrase core domain ITG12_09125 PF00665 Integrase core domain ITG12_09125 PF13276 HTH-like domain ITG12_09145 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ITG12_09145 PF02378 Phosphotransferase system, EIIC ITG12_09145 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ITG12_09150 PF08125 Mannitol dehydrogenase C-terminal domain ITG12_09150 PF01232 Mannitol dehydrogenase Rossmann domain ITG12_09155 PF05068 Mannitol repressor ITG12_09160 PF13419 Haloacid dehalogenase-like hydrolase ITG12_09165 PF00512 His Kinase A (phospho-acceptor) domain ITG12_09165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_09165 PF00672 HAMP domain ITG12_09170 PF00486 Transcriptional regulatory protein, C terminal ITG12_09170 PF00072 Response regulator receiver domain ITG12_09185 PF01380 SIS domain ITG12_09190 PF08220 DeoR-like helix-turn-helix domain ITG12_09190 PF00455 DeoR C terminal sensor domain ITG12_09195 PF02887 Pyruvate kinase, alpha/beta domain ITG12_09195 PF00224 Pyruvate kinase, barrel domain ITG12_09205 PF00990 Diguanylate cyclase, GGDEF domain ITG12_09205 PF07694 5TMR of 5TMR-LYT ITG12_09210 PF10369 Small subunit of acetolactate synthase ITG12_09215 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ITG12_09215 PF00205 Thiamine pyrophosphate enzyme, central domain ITG12_09215 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ITG12_09220 PF00501 AMP-binding enzyme ITG12_09225 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_09225 PF03466 LysR substrate binding domain ITG12_09235 PF01569 PAP2 superfamily ITG12_09245 PF00682 HMGL-like ITG12_09245 PF08502 LeuA allosteric (dimerisation) domain ITG12_09250 PF00180 Isocitrate/isopropylmalate dehydrogenase ITG12_09255 PF00330 Aconitase family (aconitate hydratase) ITG12_09260 PF00694 Aconitase C-terminal domain ITG12_09270 PF00226 DnaJ domain ITG12_09270 PF05099 Tellurite resistance protein TerB ITG12_09275 PF03968 OstA-like protein ITG12_09275 PF04453 LPS transport system D ITG12_09280 PF09312 SurA N-terminal domain ITG12_09285 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ITG12_09290 PF00398 Ribosomal RNA adenine dimethylase ITG12_09295 PF04379 ApaG domain ITG12_09300 PF00149 Calcineurin-like phosphoesterase ITG12_09305 PF00186 Dihydrofolate reductase ITG12_09310 PF12821 Threonine/Serine exporter, ThrE ITG12_09315 PF06738 Putative threonine/serine exporter ITG12_09320 PF01018 GTP1/OBG ITG12_09320 PF01926 50S ribosome-binding GTPase ITG12_09325 PF01016 Ribosomal L27 protein ITG12_09330 PF00829 Ribosomal prokaryotic L21 protein ITG12_09335 PF00348 Polyprenyl synthetase ITG12_09345 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ITG12_09345 PF00056 lactate/malate dehydrogenase, NAD binding domain ITG12_09350 PF02863 Arginine repressor, C-terminal domain ITG12_09350 PF01316 Arginine repressor, DNA binding domain ITG12_09355 PF16868 NMT1-like family ITG12_09370 PF00005 ABC transporter ITG12_09375 PF00528 Binding-protein-dependent transport system inner membrane component ITG12_09385 PF02441 Flavoprotein ITG12_09390 PF01225 Mur ligase family, catalytic domain ITG12_09390 PF02875 Mur ligase family, glutamate ligase domain ITG12_09390 PF08245 Mur ligase middle domain ITG12_09395 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain ITG12_09400 PF00719 Inorganic pyrophosphatase ITG12_09415 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like ITG12_09420 PF04357 TamB, inner membrane protein subunit of TAM complex ITG12_09425 PF07244 Surface antigen variable number repeat ITG12_09425 PF01103 Surface antigen ITG12_09425 PF17243 POTRA domain TamA domain 1 ITG12_09430 PF01625 Peptide methionine sulfoxide reductase ITG12_09440 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) ITG12_09445 PF10795 Protein of unknown function (DUF2607) ITG12_09455 PF00005 ABC transporter ITG12_09480 PF03600 Citrate transporter ITG12_09480 PF02080 TrkA-C domain ITG12_09485 PF00009 Elongation factor Tu GTP binding domain ITG12_09490 PF01507 Phosphoadenosine phosphosulfate reductase family ITG12_09495 PF10414 Sirohaem synthase dimerisation region ITG12_09495 PF14824 Sirohaem biosynthesis protein central ITG12_09495 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ITG12_09500 PF00149 Calcineurin-like phosphoesterase ITG12_09500 PF02872 5'-nucleotidase, C-terminal domain ITG12_09515 PF00270 DEAD/DEAH box helicase ITG12_09515 PF03880 DbpA RNA binding domain ITG12_09515 PF00271 Helicase conserved C-terminal domain ITG12_09520 PF13673 Acetyltransferase (GNAT) domain ITG12_09535 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ITG12_09535 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ITG12_09545 PF01196 Ribosomal protein L17 ITG12_09550 PF01000 RNA polymerase Rpb3/RpoA insert domain ITG12_09550 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ITG12_09550 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ITG12_09555 PF01479 S4 domain ITG12_09555 PF00163 Ribosomal protein S4/S9 N-terminal domain ITG12_09560 PF00411 Ribosomal protein S11 ITG12_09565 PF00416 Ribosomal protein S13/S18 ITG12_09570 PF00444 Ribosomal protein L36 ITG12_09575 PF00344 SecY translocase ITG12_09580 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ITG12_09585 PF00327 Ribosomal protein L30p/L7e ITG12_09590 PF03719 Ribosomal protein S5, C-terminal domain ITG12_09590 PF00333 Ribosomal protein S5, N-terminal domain ITG12_09595 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ITG12_09600 PF00347 Ribosomal protein L6 ITG12_09605 PF00410 Ribosomal protein S8 ITG12_09610 PF00253 Ribosomal protein S14p/S29e ITG12_09615 PF00673 ribosomal L5P family C-terminus ITG12_09615 PF00281 Ribosomal protein L5 ITG12_09620 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ITG12_09620 PF00467 KOW motif ITG12_09625 PF00238 Ribosomal protein L14p/L23e ITG12_09630 PF00366 Ribosomal protein S17 ITG12_09635 PF00831 Ribosomal L29 protein ITG12_09640 PF00252 Ribosomal protein L16p/L10e ITG12_09645 PF07650 KH domain ITG12_09645 PF00189 Ribosomal protein S3, C-terminal domain ITG12_09650 PF00237 Ribosomal protein L22p/L17e ITG12_09655 PF00203 Ribosomal protein S19 ITG12_09660 PF03947 Ribosomal Proteins L2, C-terminal domain ITG12_09660 PF00181 Ribosomal Proteins L2, RNA binding domain ITG12_09665 PF00276 Ribosomal protein L23 ITG12_09670 PF00573 Ribosomal protein L4/L1 family ITG12_09675 PF00297 Ribosomal protein L3 ITG12_09680 PF00338 Ribosomal protein S10p/S20e ITG12_09685 PF01197 Ribosomal protein L31 ITG12_09690 PF00271 Helicase conserved C-terminal domain ITG12_09690 PF18074 Primosomal protein N C-terminal domain ITG12_09690 PF17764 3′ DNA-binding domain (3′BD) ITG12_09690 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ITG12_09690 PF00270 DEAD/DEAH box helicase ITG12_09695 PF00356 Bacterial regulatory proteins, lacI family ITG12_09705 PF00227 Proteasome subunit ITG12_09710 PF00004 ATPase family associated with various cellular activities (AAA) ITG12_09710 PF07724 AAA domain (Cdc48 subfamily) ITG12_09715 PF01040 UbiA prenyltransferase family ITG12_09720 PF03737 Aldolase/RraA ITG12_09725 PF06005 Cell division protein ZapB ITG12_09730 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded ITG12_09735 PF00455 DeoR C terminal sensor domain ITG12_09735 PF08220 DeoR-like helix-turn-helix domain ITG12_09760 PF00121 Triosephosphate isomerase ITG12_09765 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ITG12_09765 PF00753 Metallo-beta-lactamase superfamily ITG12_09765 PF10996 Beta-Casp domain ITG12_09770 PF00483 Nucleotidyl transferase ITG12_09775 PF01370 NAD dependent epimerase/dehydratase family ITG12_09780 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ITG12_09780 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ITG12_09780 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ITG12_09785 PF02397 Bacterial sugar transferase ITG12_09815 PF00534 Glycosyl transferases group 1 ITG12_09815 PF13439 Glycosyltransferase Family 4 ITG12_09825 PF18412 Outer-membrane lipoprotein Wza C-terminal domain ITG12_09825 PF10531 SLBB domain ITG12_09825 PF02563 Polysaccharide biosynthesis/export protein ITG12_09850 PF06082 Exopolysaccharide biosynthesis protein YbjH ITG12_09855 PF01370 NAD dependent epimerase/dehydratase family ITG12_09860 PF03279 Bacterial lipid A biosynthesis acyltransferase ITG12_09865 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ITG12_09870 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) ITG12_09875 PF02348 Cytidylyltransferase ITG12_09880 PF00459 Inositol monophosphatase family ITG12_09885 PF03102 NeuB family ITG12_09885 PF08666 SAF domain ITG12_09900 PF08666 SAF domain ITG12_09900 PF03102 NeuB family ITG12_09910 PF08245 Mur ligase middle domain ITG12_09910 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ITG12_09910 PF02875 Mur ligase family, glutamate ligase domain ITG12_09915 PF00155 Aminotransferase class I and II ITG12_09925 PF02348 Cytidylyltransferase ITG12_09930 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family ITG12_09935 PF02719 Polysaccharide biosynthesis protein ITG12_09945 PF01219 Prokaryotic diacylglycerol kinase ITG12_09950 PF01075 Glycosyltransferase family 9 (heptosyltransferase) ITG12_09955 PF00535 Glycosyl transferase family 2 ITG12_09960 PF13439 Glycosyltransferase Family 4 ITG12_09960 PF00534 Glycosyl transferases group 1 ITG12_09965 PF01467 Cytidylyltransferase-like ITG12_09970 PF05686 Glycosyl transferase family 90 ITG12_09975 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ITG12_09975 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ITG12_09975 PF06827 Zinc finger found in FPG and IleRS ITG12_09985 PF00471 Ribosomal protein L33 ITG12_09990 PF00830 Ribosomal L28 family ITG12_09995 PF04002 RadC-like JAB domain ITG12_10000 PF04127 DNA / pantothenate metabolism flavoprotein ITG12_10000 PF02441 Flavoprotein ITG12_10005 PF00440 Bacterial regulatory proteins, tetR family ITG12_10010 PF03279 Bacterial lipid A biosynthesis acyltransferase ITG12_10015 PF00156 Phosphoribosyl transferase domain ITG12_10020 PF03725 3' exoribonuclease family, domain 2 ITG12_10020 PF01138 3' exoribonuclease family, domain 1 ITG12_10025 PF08340 Domain of unknown function (DUF1732) ITG12_10025 PF03755 YicC-like family, N-terminal region ITG12_10030 PF18500 CadC C-terminal domain 1 ITG12_10030 PF00486 Transcriptional regulatory protein, C terminal ITG12_10040 PF00892 EamA-like transporter family ITG12_10055 PF00005 ABC transporter ITG12_10055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ITG12_10060 PF00005 ABC transporter ITG12_10060 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ITG12_10065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ITG12_10070 PF00528 Binding-protein-dependent transport system inner membrane component ITG12_10070 PF12911 N-terminal TM domain of oligopeptide transport permease C ITG12_10075 PF00528 Binding-protein-dependent transport system inner membrane component ITG12_10080 PF07715 TonB-dependent Receptor Plug Domain ITG12_10080 PF00593 TonB dependent receptor ITG12_10095 PF01618 MotA/TolQ/ExbB proton channel family ITG12_10100 PF02472 Biopolymer transport protein ExbD/TolR ITG12_10115 PF00625 Guanylate kinase ITG12_10120 PF01192 RNA polymerase Rpb6 ITG12_10125 PF13291 ACT domain ITG12_10125 PF04607 Region found in RelA / SpoT proteins ITG12_10125 PF02824 TGS domain ITG12_10130 PF00588 SpoU rRNA Methylase family ITG12_10130 PF12105 SpoU, rRNA methylase, C-terminal ITG12_10135 PF00270 DEAD/DEAH box helicase ITG12_10135 PF17191 RecG wedge domain ITG12_10135 PF00271 Helicase conserved C-terminal domain ITG12_10140 PF00326 Prolyl oligopeptidase family ITG12_10145 PF00860 Permease family ITG12_10150 PF00512 His Kinase A (phospho-acceptor) domain ITG12_10150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_10150 PF00672 HAMP domain ITG12_10155 PF00486 Transcriptional regulatory protein, C terminal ITG12_10155 PF00072 Response regulator receiver domain ITG12_10160 PF03449 Transcription elongation factor, N-terminal ITG12_10160 PF01272 Transcription elongation factor, GreA/GreB, C-term ITG12_10170 PF16921 Tex protein YqgF-like domain ITG12_10170 PF09371 Tex-like protein N-terminal domain ITG12_10170 PF00575 S1 RNA binding domain ITG12_10170 PF17674 HHH domain ITG12_10180 PF00561 alpha/beta hydrolase fold ITG12_10185 PF00156 Phosphoribosyl transferase domain ITG12_10190 PF01106 NifU-like domain ITG12_10190 PF01521 Iron-sulphur cluster biosynthesis ITG12_10195 PF00293 NUDIX domain ITG12_10200 PF00459 Inositol monophosphatase family ITG12_10205 PF01203 Type II secretion system (T2SS), protein N ITG12_10210 PF04612 Type II secretion system (T2SS), protein M ITG12_10215 PF05134 Type II secretion system (T2SS), protein L ITG12_10215 PF12693 GspL periplasmic domain ITG12_10220 PF03934 Type II secretion system (T2SS), protein K ITG12_10225 PF07963 Prokaryotic N-terminal methylation motif ITG12_10225 PF11612 Type II secretion system (T2SS), protein J ITG12_10230 PF07963 Prokaryotic N-terminal methylation motif ITG12_10230 PF02501 Type II secretion system (T2SS), protein I ITG12_10235 PF12019 Type II transport protein GspH ITG12_10240 PF07963 Prokaryotic N-terminal methylation motif ITG12_10240 PF08334 Type II secretion system (T2SS), protein G ITG12_10245 PF00482 Type II secretion system (T2SS), protein F ITG12_10250 PF00437 Type II/IV secretion system protein ITG12_10255 PF00263 Bacterial type II and III secretion system protein ITG12_10255 PF03958 Bacterial type II/III secretion system short domain ITG12_10260 PF11356 Type II secretion system protein C ITG12_10265 PF01479 S4 domain ITG12_10270 PF01430 Hsp33 protein ITG12_10275 PF01293 Phosphoenolpyruvate carboxykinase ITG12_10285 PF00583 Acetyltransferase (GNAT) family ITG12_10285 PF09500 Putative thioesterase (yiiD_Cterm) ITG12_10290 PF02580 D-Tyr-tRNA(Tyr) deacylase ITG12_10295 PF03631 Virulence factor BrkB ITG12_10310 PF03144 Elongation factor Tu domain 2 ITG12_10310 PF00009 Elongation factor Tu GTP binding domain ITG12_10310 PF00679 Elongation factor G C-terminus ITG12_10315 PF03951 Glutamine synthetase, beta-Grasp domain ITG12_10315 PF00120 Glutamine synthetase, catalytic domain ITG12_10325 PF00512 His Kinase A (phospho-acceptor) domain ITG12_10325 PF00989 PAS fold ITG12_10325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_10330 PF02954 Bacterial regulatory protein, Fis family ITG12_10330 PF00158 Sigma-54 interaction domain ITG12_10330 PF00072 Response regulator receiver domain ITG12_10335 PF00563 EAL domain ITG12_10335 PF08448 PAS fold ITG12_10335 PF08447 PAS fold ITG12_10335 PF00990 Diguanylate cyclase, GGDEF domain ITG12_10340 PF00962 Adenosine/AMP deaminase ITG12_10345 PF06969 HemN C-terminal domain ITG12_10345 PF04055 Radical SAM superfamily ITG12_10350 PF10675 Protein of unknown function (DUF2489) ITG12_10355 PF04220 Der GTPase activator (YihI) ITG12_10365 PF00034 Cytochrome c ITG12_10370 PF01926 50S ribosome-binding GTPase ITG12_10375 PF01612 3'-5' exonuclease ITG12_10375 PF00476 DNA polymerase family A ITG12_10375 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ITG12_10375 PF01367 5'-3' exonuclease, C-terminal SAM fold ITG12_10385 PF00490 Delta-aminolevulinic acid dehydratase ITG12_10390 PF01026 TatD related DNase ITG12_10395 PF00902 Sec-independent protein translocase protein (TatC) ITG12_10400 PF02416 mttA/Hcf106 family ITG12_10405 PF02416 mttA/Hcf106 family ITG12_10410 PF03109 ABC1 family ITG12_10415 PF02036 SCP-2 sterol transfer family ITG12_10420 PF01209 ubiE/COQ5 methyltransferase family ITG12_10425 PF02646 RmuC family ITG12_10435 PF03707 Bacterial signalling protein N terminal repeat ITG12_10435 PF00990 Diguanylate cyclase, GGDEF domain ITG12_10435 PF00563 EAL domain ITG12_10455 PF10625 Universal stress protein B (UspB) ITG12_10460 PF00210 Ferritin-like domain ITG12_10465 PF00582 Universal stress protein family ITG12_10470 PF00892 EamA-like transporter family ITG12_10480 PF04445 Putative SAM-dependent methyltransferase ITG12_10485 PF00563 EAL domain ITG12_10485 PF00990 Diguanylate cyclase, GGDEF domain ITG12_10485 PF08448 PAS fold ITG12_10490 PF01037 Lrp/AsnC ligand binding domain ITG12_10495 PF01432 Peptidase family M3 ITG12_10500 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ ITG12_10510 PF07992 Pyridine nucleotide-disulphide oxidoreductase ITG12_10510 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ITG12_10520 PF01081 KDPG and KHG aldolase ITG12_10525 PF02447 GntP family permease ITG12_10530 PF01202 Shikimate kinase ITG12_10535 PF00920 Dehydratase family ITG12_10540 PF00893 Small Multidrug Resistance protein ITG12_10545 PF00893 Small Multidrug Resistance protein ITG12_10550 PF03466 LysR substrate binding domain ITG12_10550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_10555 PF00356 Bacterial regulatory proteins, lacI family ITG12_10555 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ITG12_10560 PF00069 Protein kinase domain ITG12_10590 PF00528 Binding-protein-dependent transport system inner membrane component ITG12_10590 PF12911 N-terminal TM domain of oligopeptide transport permease C ITG12_10595 PF00528 Binding-protein-dependent transport system inner membrane component ITG12_10600 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ITG12_10605 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ITG12_10605 PF00005 ABC transporter ITG12_10610 PF13419 Haloacid dehalogenase-like hydrolase ITG12_10640 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ITG12_10645 PF13361 UvrD-like helicase C-terminal domain ITG12_10645 PF00580 UvrD/REP helicase N-terminal domain ITG12_10650 PF00440 Bacterial regulatory proteins, tetR family ITG12_10650 PF08359 YsiA-like protein, C-terminal region ITG12_10655 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ITG12_10660 PF00873 AcrB/AcrD/AcrF family ITG12_10665 PF04380 Membrane fusogenic activity ITG12_10670 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ITG12_10670 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ITG12_10675 PF03466 LysR substrate binding domain ITG12_10675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_10720 PF12724 Flavodoxin domain ITG12_10725 PF02386 Cation transport protein ITG12_10730 PF09186 Domain of unknown function (DUF1949) ITG12_10730 PF01205 Uncharacterized protein family UPF0029 ITG12_10735 PF00378 Enoyl-CoA hydratase/isomerase ITG12_10735 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ITG12_10735 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ITG12_10740 PF02803 Thiolase, C-terminal domain ITG12_10740 PF00108 Thiolase, N-terminal domain ITG12_10745 PF08240 Alcohol dehydrogenase GroES-like domain ITG12_10745 PF00107 Zinc-binding dehydrogenase ITG12_10750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_10750 PF03466 LysR substrate binding domain ITG12_10760 PF01206 Sulfurtransferase TusA ITG12_10770 PF01169 Uncharacterized protein family UPF0016 ITG12_10775 PF02091 Glycyl-tRNA synthetase alpha subunit ITG12_10780 PF05746 DALR anticodon binding domain ITG12_10780 PF02092 Glycyl-tRNA synthetase beta subunit ITG12_10785 PF00128 Alpha amylase, catalytic domain ITG12_10790 PF00072 Response regulator receiver domain ITG12_10790 PF00486 Transcriptional regulatory protein, C terminal ITG12_10795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_10800 PF01389 OmpA-like transmembrane domain ITG12_10800 PF00691 OmpA family ITG12_10835 PF00437 Type II/IV secretion system protein ITG12_10850 PF13629 Pilus formation protein N terminal region ITG12_10850 PF00263 Bacterial type II and III secretion system protein ITG12_10850 PF04972 BON domain ITG12_10870 PF00155 Aminotransferase class I and II ITG12_10875 PF00011 Hsp20/alpha crystallin family ITG12_10880 PF01751 Toprim domain ITG12_10880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_10880 PF18053 DNA gyrase B subunit insert domain ITG12_10880 PF00986 DNA gyrase B subunit, carboxyl terminus ITG12_10880 PF00204 DNA gyrase B ITG12_10885 PF02463 RecF/RecN/SMC N terminal domain ITG12_10890 PF00712 DNA polymerase III beta subunit, N-terminal domain ITG12_10890 PF02767 DNA polymerase III beta subunit, central domain ITG12_10890 PF02768 DNA polymerase III beta subunit, C-terminal domain ITG12_10895 PF08299 Bacterial dnaA protein helix-turn-helix ITG12_10895 PF11638 DnaA N-terminal domain ITG12_10895 PF00308 Bacterial dnaA protein ITG12_10900 PF00497 Bacterial extracellular solute-binding proteins, family 3 ITG12_10905 PF00528 Binding-protein-dependent transport system inner membrane component ITG12_10910 PF00005 ABC transporter ITG12_10915 PF00468 Ribosomal protein L34 ITG12_10920 PF00825 Ribonuclease P ITG12_10925 PF01809 Putative membrane protein insertion efficiency factor ITG12_10930 PF02096 60Kd inner membrane protein ITG12_10930 PF14849 YidC periplasmic domain ITG12_10935 PF10396 GTP-binding protein TrmE N-terminus ITG12_10935 PF12631 MnmE helical domain ITG12_10935 PF01926 50S ribosome-binding GTPase ITG12_10940 PF00258 Flavodoxin ITG12_10945 PF13932 GidA associated domain ITG12_10945 PF01134 Glucose inhibited division protein A ITG12_10950 PF02527 rRNA small subunit methyltransferase G ITG12_10955 PF13614 AAA domain ITG12_10960 PF02195 ParB-like nuclease domain ITG12_10960 PF17762 HTH domain found in ParB protein ITG12_10965 PF03899 ATP synthase I chain ITG12_10970 PF00119 ATP synthase A chain ITG12_10975 PF00137 ATP synthase subunit C ITG12_10980 PF00430 ATP synthase B/B' CF(0) ITG12_10985 PF00213 ATP synthase delta (OSCP) subunit ITG12_10990 PF00306 ATP synthase alpha/beta chain, C terminal domain ITG12_10990 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ITG12_10990 PF02874 ATP synthase alpha/beta family, beta-barrel domain ITG12_10995 PF00231 ATP synthase ITG12_11000 PF02874 ATP synthase alpha/beta family, beta-barrel domain ITG12_11000 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ITG12_11005 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ITG12_11005 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain ITG12_11010 PF00132 Bacterial transferase hexapeptide (six repeats) ITG12_11010 PF12804 MobA-like NTP transferase domain ITG12_11015 PF00528 Binding-protein-dependent transport system inner membrane component ITG12_11020 PF00497 Bacterial extracellular solute-binding proteins, family 3 ITG12_11025 PF07690 Major Facilitator Superfamily ITG12_11030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_11030 PF03466 LysR substrate binding domain ITG12_11035 PF00990 Diguanylate cyclase, GGDEF domain ITG12_11040 PF00585 C-terminal regulatory domain of Threonine dehydratase ITG12_11040 PF00291 Pyridoxal-phosphate dependent enzyme ITG12_11045 PF00920 Dehydratase family ITG12_11050 PF01063 Amino-transferase class IV ITG12_11060 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ITG12_11060 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ITG12_11060 PF00205 Thiamine pyrophosphate enzyme, central domain ITG12_11065 PF13335 Magnesium chelatase, subunit ChlI C-terminal ITG12_11065 PF01078 Magnesium chelatase, subunit ChlI ITG12_11075 PF01553 Acyltransferase ITG12_11080 PF01323 DSBA-like thioredoxin domain ITG12_11085 PF01636 Phosphotransferase enzyme family ITG12_11090 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase ITG12_11090 PF13746 4Fe-4S dicluster domain ITG12_11090 PF12801 4Fe-4S binding domain ITG12_11095 PF06288 Protein of unknown function (DUF1040) ITG12_11105 PF07070 SpoOM protein ITG12_11110 PF03006 Haemolysin-III related ITG12_11120 PF02386 Cation transport protein ITG12_11125 PF02080 TrkA-C domain ITG12_11125 PF02254 TrkA-N domain ITG12_11130 PF01189 16S rRNA methyltransferase RsmB/F ITG12_11130 PF01029 NusB family ITG12_11135 PF02911 Formyl transferase, C-terminal domain ITG12_11135 PF00551 Formyl transferase ITG12_11140 PF01327 Polypeptide deformylase ITG12_11150 PF17782 DprA winged helix domain ITG12_11150 PF02481 DNA recombination-mediator protein A ITG12_11155 PF04361 Protein of unknown function (DUF494) ITG12_11160 PF01396 Topoisomerase DNA binding C4 zinc finger ITG12_11170 PF02222 ATP-grasp domain ITG12_11170 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ITG12_11175 PF00731 AIR carboxylase ITG12_11180 PF01300 Telomere recombination ITG12_11185 PF01218 Coproporphyrinogen III oxidase ITG12_11190 PF08501 Shikimate dehydrogenase substrate binding domain ITG12_11190 PF01488 Shikimate / quinate 5-dehydrogenase ITG12_11190 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ITG12_11195 PF07369 Protein of unknown function (DUF1488) ITG12_11200 PF00132 Bacterial transferase hexapeptide (six repeats) ITG12_11240 PF00394 Multicopper oxidase ITG12_11240 PF07731 Multicopper oxidase ITG12_11240 PF07732 Multicopper oxidase ITG12_11245 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ITG12_11250 PF13667 ThiC-associated domain ITG12_11250 PF01964 Radical SAM ThiC family ITG12_11255 PF02581 Thiamine monophosphate synthase ITG12_11260 PF00899 ThiF family ITG12_11265 PF02597 ThiS family ITG12_11270 PF05690 Thiazole biosynthesis protein ThiG ITG12_11275 PF06968 Biotin and Thiamin Synthesis associated domain ITG12_11275 PF04055 Radical SAM superfamily ITG12_11280 PF01321 Creatinase/Prolidase N-terminal domain ITG12_11280 PF00557 Metallopeptidase family M24 ITG12_11280 PF01321 Creatinase/Prolidase N-terminal domain ITG12_11280 PF00557 Metallopeptidase family M24 ITG12_11285 PF03466 LysR substrate binding domain ITG12_11285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_11290 PF07690 Major Facilitator Superfamily ITG12_11310 PF05114 Protein of unknown function (DUF692) ITG12_11320 PF00580 UvrD/REP helicase N-terminal domain ITG12_11320 PF13361 UvrD-like helicase C-terminal domain ITG12_11330 PF01810 LysE type translocator ITG12_11340 PF00892 EamA-like transporter family ITG12_11345 PF09382 RQC domain ITG12_11345 PF00270 DEAD/DEAH box helicase ITG12_11345 PF00570 HRDC domain ITG12_11345 PF16124 RecQ zinc-binding ITG12_11345 PF00271 Helicase conserved C-terminal domain ITG12_11355 PF02592 Putative vitamin uptake transporter ITG12_11365 PF02541 Ppx/GppA phosphatase family ITG12_11370 PF00271 Helicase conserved C-terminal domain ITG12_11370 PF00270 DEAD/DEAH box helicase ITG12_11375 PF00085 Thioredoxin ITG12_11380 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ITG12_11380 PF07498 Rho termination factor, N-terminal domain ITG12_11380 PF07497 Rho termination factor, RNA-binding domain ITG12_11390 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ITG12_11395 PF00111 2Fe-2S iron-sulfur cluster binding domain ITG12_11400 PF00175 Oxidoreductase NAD-binding domain ITG12_11435 PF07219 HemY protein N-terminus ITG12_11440 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase ITG12_11445 PF02602 Uroporphyrinogen-III synthase HemD ITG12_11450 PF03900 Porphobilinogen deaminase, C-terminal domain ITG12_11450 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ITG12_11455 PF01295 Adenylate cyclase, class-I ITG12_11455 PF12633 Adenylate cyclase NT domain ITG12_11460 PF01491 Frataxin-like domain ITG12_11470 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ITG12_11470 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ITG12_11475 PF01678 Diaminopimelate epimerase ITG12_11485 PF02899 Phage integrase, N-terminal SAM-like domain ITG12_11485 PF00589 Phage integrase family ITG12_11490 PF13419 Haloacid dehalogenase-like hydrolase ITG12_11495 PF00563 EAL domain ITG12_11495 PF08495 FIST N domain ITG12_11495 PF10442 FIST C domain ITG12_11495 PF00990 Diguanylate cyclase, GGDEF domain ITG12_11500 PF03942 DTW domain ITG12_11520 PF12146 Serine aminopeptidase, S33 ITG12_11525 PF01810 LysE type translocator ITG12_11530 PF00563 EAL domain ITG12_11530 PF08668 HDOD domain ITG12_11535 PF01022 Bacterial regulatory protein, arsR family ITG12_11540 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ITG12_11540 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ITG12_11585 PF01914 MarC family integral membrane protein ITG12_11600 PF00448 SRP54-type protein, GTPase domain ITG12_11600 PF02881 SRP54-type protein, helical bundle domain ITG12_11605 PF00005 ABC transporter ITG12_11610 PF18075 FtsX extracellular domain ITG12_11615 PF00140 Sigma-70 factor, region 1.2 ITG12_11615 PF04542 Sigma-70 region 2 ITG12_11615 PF04545 Sigma-70, region 4 ITG12_11620 PF00581 Rhodanese-like domain ITG12_11625 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease ITG12_11625 PF01694 Rhomboid family ITG12_11630 PF03748 Flagellar basal body-associated protein FliL ITG12_11635 PF04345 Chorismate lyase ITG12_11640 PF01040 UbiA prenyltransferase family ITG12_11645 PF01553 Acyltransferase ITG12_11650 PF01726 LexA DNA binding domain ITG12_11650 PF00717 Peptidase S24-like ITG12_11660 PF01554 MatE ITG12_11665 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ITG12_11665 PF07992 Pyridine nucleotide-disulphide oxidoreductase ITG12_11670 PF00440 Bacterial regulatory proteins, tetR family ITG12_11680 PF05958 tRNA (Uracil-5-)-methyltransferase ITG12_11685 PF07715 TonB-dependent Receptor Plug Domain ITG12_11685 PF00593 TonB dependent receptor ITG12_11695 PF01177 Asp/Glu/Hydantoin racemase ITG12_11730 PF13091 PLD-like domain ITG12_11740 PF01565 FAD binding domain ITG12_11740 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ITG12_11745 PF02237 Biotin protein ligase C terminal domain ITG12_11745 PF03099 Biotin/lipoate A/B protein ligase family ITG12_11745 PF08279 HTH domain ITG12_11750 PF00485 Phosphoribulokinase / Uridine kinase family ITG12_11775 PF00009 Elongation factor Tu GTP binding domain ITG12_11775 PF03144 Elongation factor Tu domain 2 ITG12_11775 PF03143 Elongation factor Tu C-terminal domain ITG12_11780 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ITG12_11785 PF00467 KOW motif ITG12_11785 PF02357 Transcription termination factor nusG ITG12_11790 PF00298 Ribosomal protein L11, RNA binding domain ITG12_11790 PF03946 Ribosomal protein L11, N-terminal domain ITG12_11795 PF00687 Ribosomal protein L1p/L10e family ITG12_11800 PF00466 Ribosomal protein L10 ITG12_11805 PF00542 Ribosomal protein L7/L12 C-terminal domain ITG12_11805 PF16320 Ribosomal protein L7/L12 dimerisation domain ITG12_11810 PF00562 RNA polymerase Rpb2, domain 6 ITG12_11810 PF10385 RNA polymerase beta subunit external 1 domain ITG12_11810 PF04565 RNA polymerase Rpb2, domain 3 ITG12_11810 PF04561 RNA polymerase Rpb2, domain 2 ITG12_11810 PF04560 RNA polymerase Rpb2, domain 7 ITG12_11810 PF04563 RNA polymerase beta subunit ITG12_11815 PF05000 RNA polymerase Rpb1, domain 4 ITG12_11815 PF04998 RNA polymerase Rpb1, domain 5 ITG12_11815 PF00623 RNA polymerase Rpb1, domain 2 ITG12_11815 PF04983 RNA polymerase Rpb1, domain 3 ITG12_11815 PF04997 RNA polymerase Rpb1, domain 1 ITG12_11820 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ ITG12_11825 PF00293 NUDIX domain ITG12_11825 PF09297 NADH pyrophosphatase zinc ribbon domain ITG12_11830 PF01208 Uroporphyrinogen decarboxylase (URO-D) ITG12_11835 PF03167 Uracil DNA glycosylase superfamily ITG12_11840 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ITG12_11845 PF04222 Protein of unknown function (DUF416) ITG12_11850 PF00571 CBS domain ITG12_11850 PF01595 Cyclin M transmembrane N-terminal domain ITG12_11855 PF00216 Bacterial DNA-binding protein ITG12_11865 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ITG12_11865 PF02843 Phosphoribosylglycinamide synthetase, C domain ITG12_11865 PF02844 Phosphoribosylglycinamide synthetase, N domain ITG12_11870 PF02142 MGS-like domain ITG12_11870 PF01808 AICARFT/IMPCHase bienzyme ITG12_11880 PF13411 MerR HTH family regulatory protein ITG12_11885 PF18500 CadC C-terminal domain 1 ITG12_11885 PF00486 Transcriptional regulatory protein, C terminal ITG12_11890 PF01548 Transposase ITG12_11890 PF02371 Transposase IS116/IS110/IS902 family ITG12_11895 PF13520 Amino acid permease ITG12_11900 PF01276 Orn/Lys/Arg decarboxylase, major domain ITG12_11900 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ITG12_11900 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ITG12_11975 PF00990 Diguanylate cyclase, GGDEF domain ITG12_11980 PF02954 Bacterial regulatory protein, Fis family ITG12_11985 PF01207 Dihydrouridine synthase (Dus) ITG12_11995 PF02785 Biotin carboxylase C-terminal domain ITG12_11995 PF00289 Biotin carboxylase, N-terminal domain ITG12_11995 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ITG12_12000 PF00364 Biotin-requiring enzyme ITG12_12005 PF01220 Dehydroquinase class II ITG12_12010 PF00501 AMP-binding enzyme ITG12_12010 PF13193 AMP-binding enzyme C-terminal domain ITG12_12010 PF16177 Acetyl-coenzyme A synthetase N-terminus ITG12_12025 PF12832 MFS_1 like family ITG12_12030 PF00672 HAMP domain ITG12_12030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_12030 PF00512 His Kinase A (phospho-acceptor) domain ITG12_12030 PF01627 Hpt domain ITG12_12030 PF00072 Response regulator receiver domain ITG12_12035 PF10415 Fumarase C C-terminus ITG12_12035 PF00206 Lyase ITG12_12050 PF00474 Sodium:solute symporter family ITG12_12060 PF01914 MarC family integral membrane protein ITG12_12065 PF00072 Response regulator receiver domain ITG12_12065 PF00196 Bacterial regulatory proteins, luxR family ITG12_12070 PF02683 Cytochrome C biogenesis protein transmembrane region ITG12_12070 PF11412 Disulphide bond corrector protein DsbC ITG12_12075 PF03605 Anaerobic c4-dicarboxylate membrane transporter ITG12_12080 PF10415 Fumarase C C-terminus ITG12_12080 PF00206 Lyase ITG12_12085 PF04186 FxsA cytoplasmic membrane protein ITG12_12090 PF00588 SpoU rRNA Methylase family ITG12_12095 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ITG12_12095 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ITG12_12100 PF16527 Two-component sensor protein CpxA, periplasmic domain ITG12_12100 PF00672 HAMP domain ITG12_12100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_12100 PF00512 His Kinase A (phospho-acceptor) domain ITG12_12105 PF00072 Response regulator receiver domain ITG12_12105 PF00486 Transcriptional regulatory protein, C terminal ITG12_12110 PF07813 LTXXQ motif family protein ITG12_12115 PF01545 Cation efflux family ITG12_12115 PF16916 Dimerisation domain of Zinc Transporter ITG12_12120 PF00365 Phosphofructokinase ITG12_12125 PF01554 MatE ITG12_12130 PF00166 Chaperonin 10 Kd subunit ITG12_12135 PF00118 TCP-1/cpn60 chaperonin family ITG12_12145 PF02308 MgtC family ITG12_12150 PF04055 Radical SAM superfamily ITG12_12155 PF08207 Elongation factor P (EF-P) KOW-like domain ITG12_12155 PF09285 Elongation factor P, C-terminal ITG12_12155 PF01132 Elongation factor P (EF-P) OB domain ITG12_12165 PF02313 Fumarate reductase subunit D ITG12_12170 PF02300 Fumarate reductase subunit C ITG12_12175 PF13085 2Fe-2S iron-sulfur cluster binding domain ITG12_12175 PF13183 4Fe-4S dicluster domain ITG12_12180 PF00890 FAD binding domain ITG12_12180 PF02910 Fumarate reductase flavoprotein C-term ITG12_12185 PF00152 tRNA synthetases class II (D, K and N) ITG12_12195 PF08360 QacR-like protein, C-terminal region ITG12_12195 PF00440 Bacterial regulatory proteins, tetR family ITG12_12205 PF01551 Peptidase family M23 ITG12_12210 PF00132 Bacterial transferase hexapeptide (six repeats) ITG12_12210 PF06426 Serine acetyltransferase, N-terminal ITG12_12215 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ITG12_12215 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ITG12_12220 PF02556 Preprotein translocase subunit SecB ITG12_12225 PF00581 Rhodanese-like domain ITG12_12230 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ITG12_12230 PF01676 Metalloenzyme superfamily ITG12_12240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG12_12240 PF00672 HAMP domain ITG12_12245 PF00939 Sodium:sulfate symporter transmembrane region ITG12_12250 PF02666 Phosphatidylserine decarboxylase ITG12_12255 PF03193 RsgA GTPase ITG12_12260 PF00929 Exonuclease ITG12_12335 PF08331 Domain of unknown function (DUF1730) ITG12_12340 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ITG12_12345 PF01520 N-acetylmuramoyl-L-alanine amidase ITG12_12350 PF01119 DNA mismatch repair protein, C-terminal domain ITG12_12350 PF08676 MutL C terminal dimerisation domain ITG12_12360 PF17209 Hfq protein ITG12_12365 PF16360 GTP-binding GTPase Middle Region ITG12_12365 PF13167 GTP-binding GTPase N-terminal ITG12_12365 PF01926 50S ribosome-binding GTPase ITG12_12370 PF01145 SPFH domain / Band 7 family ITG12_12370 PF12221 Bacterial membrane protein N terminal ITG12_12375 PF01145 SPFH domain / Band 7 family ITG12_12380 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) ITG12_12385 PF00709 Adenylosuccinate synthetase ITG12_12390 PF08238 Sel1 repeat ITG12_12395 PF00970 Oxidoreductase FAD-binding domain ITG12_12395 PF00175 Oxidoreductase NAD-binding domain ITG12_12395 PF00042 Globin ITG12_12400 PF02082 Transcriptional regulator ITG12_12405 PF17876 Cold shock domain ITG12_12405 PF08461 Ribonuclease R winged-helix domain ITG12_12405 PF08206 Ribonuclease B OB domain ITG12_12405 PF00773 RNB domain ITG12_12405 PF00575 S1 RNA binding domain ITG12_12410 PF00588 SpoU rRNA Methylase family ITG12_12410 PF08032 RNA 2'-O ribose methyltransferase substrate binding ITG12_12415 PF13419 Haloacid dehalogenase-like hydrolase ITG12_12420 PF00579 tRNA synthetases class I (W and Y) ITG12_12435 PF00117 Glutamine amidotransferase class-I ITG12_12440 PF00202 Aminotransferase class-III ITG12_12445 PF04958 Arginine N-succinyltransferase beta subunit ITG12_12450 PF00171 Aldehyde dehydrogenase family ITG12_12460 PF00027 Cyclic nucleotide-binding domain ITG12_12460 PF13545 Crp-like helix-turn-helix domain ITG12_12465 PF00485 Phosphoribulokinase / Uridine kinase family ITG12_12470 PF06794 Uncharacterised protein family (UPF0270) ITG12_12475 PF00561 alpha/beta hydrolase fold ITG12_12485 PF00005 ABC transporter ITG12_12485 PF12848 ABC transporter ITG12_12490 PF02525 Flavodoxin-like fold ITG12_12495 PF02254 TrkA-N domain ITG12_12495 PF00999 Sodium/hydrogen exchanger family ITG12_12505 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ITG12_12510 PF01112 Asparaginase ITG12_12515 PF04102 SlyX ITG12_12525 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ITG12_12525 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ITG12_12530 PF08348 YheO-like PAS domain ITG12_12530 PF13309 HTH domain ITG12_12535 PF02635 DsrE/DsrF-like family ITG12_12540 PF02635 DsrE/DsrF-like family ITG12_12545 PF04077 DsrH like protein ITG12_12550 PF00164 Ribosomal protein S12/S23 ITG12_12555 PF00177 Ribosomal protein S7p/S5e ITG12_12560 PF03144 Elongation factor Tu domain 2 ITG12_12560 PF00679 Elongation factor G C-terminus ITG12_12560 PF14492 Elongation Factor G, domain II ITG12_12560 PF03764 Elongation factor G, domain IV ITG12_12560 PF00009 Elongation factor Tu GTP binding domain ITG12_12565 PF03144 Elongation factor Tu domain 2 ITG12_12565 PF00009 Elongation factor Tu GTP binding domain ITG12_12565 PF03143 Elongation factor Tu C-terminal domain ITG12_12570 PF04324 BFD-like [2Fe-2S] binding domain ITG12_12575 PF00210 Ferritin-like domain ITG12_12580 PF03949 Malic enzyme, NAD binding domain ITG12_12580 PF00390 Malic enzyme, N-terminal domain ITG12_12585 PF01340 Met Apo-repressor, MetJ ITG12_12590 PF01053 Cys/Met metabolism PLP-dependent enzyme ITG12_12595 PF03447 Homoserine dehydrogenase, NAD binding domain ITG12_12595 PF00742 Homoserine dehydrogenase ITG12_12595 PF00696 Amino acid kinase family ITG12_12600 PF02219 Methylenetetrahydrofolate reductase ITG12_12610 PF00311 Phosphoenolpyruvate carboxylase ITG12_12615 PF07687 Peptidase dimerisation domain ITG12_12615 PF01546 Peptidase family M20/M25/M40 ITG12_12620 PF01118 Semialdehyde dehydrogenase, NAD binding domain ITG12_12620 PF02774 Semialdehyde dehydrogenase, dimerisation domain ITG12_12625 PF00696 Amino acid kinase family ITG12_12630 PF00764 Arginosuccinate synthase ITG12_12635 PF14698 Argininosuccinate lyase C-terminal ITG12_12635 PF00206 Lyase ITG12_12635 PF00583 Acetyltransferase (GNAT) family ITG12_12645 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ITG12_12645 PF07992 Pyridine nucleotide-disulphide oxidoreductase ITG12_12650 PF00462 Glutaredoxin ITG12_12650 PF08534 Redoxin ITG12_12655 PF03466 LysR substrate binding domain ITG12_12655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_12660 PF00912 Transglycosylase ITG12_12660 PF00905 Penicillin binding protein transpeptidase domain ITG12_12660 PF17092 Penicillin-binding protein OB-like domain ITG12_12670 PF05137 Fimbrial assembly protein (PilN) ITG12_12680 PF04351 Pilus assembly protein, PilP ITG12_12685 PF07660 Secretin and TonB N terminus short domain ITG12_12685 PF00263 Bacterial type II and III secretion system protein ITG12_12685 PF03958 Bacterial type II/III secretion system short domain ITG12_12685 PF11741 AMIN domain ITG12_12690 PF01202 Shikimate kinase ITG12_12695 PF01761 3-dehydroquinate synthase ITG12_12705 PF02086 D12 class N6 adenine-specific DNA methyltransferase ITG12_12710 PF00834 Ribulose-phosphate 3 epimerase family ITG12_12715 PF01250 Ribosomal protein S6 ITG12_12720 PF00436 Single-strand binding protein family ITG12_12725 PF01084 Ribosomal protein S18 ITG12_12730 PF03948 Ribosomal protein L9, C-terminal domain ITG12_12730 PF01281 Ribosomal protein L9, N-terminal domain ITG12_12740 PF03796 DnaB-like helicase C terminal domain ITG12_12740 PF00772 DnaB-like helicase N terminal domain ITG12_12745 PF00842 Alanine racemase, C-terminal domain ITG12_12745 PF01168 Alanine racemase, N-terminal domain ITG12_12755 PF01894 Uncharacterised protein family UPF0047 ITG12_12760 PF00342 Phosphoglucose isomerase ITG12_12770 PF01475 Ferric uptake regulator family ITG12_12775 PF01207 Dihydrouridine synthase (Dus) ITG12_12795 PF00667 FAD binding domain ITG12_12795 PF00258 Flavodoxin ITG12_12795 PF00175 Oxidoreductase NAD-binding domain ITG12_12800 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ITG12_12800 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ITG12_12805 PF01507 Phosphoadenosine phosphosulfate reductase family ITG12_12860 PF02371 Transposase IS116/IS110/IS902 family ITG12_12860 PF01548 Transposase ITG12_12865 PF00999 Sodium/hydrogen exchanger family ITG12_12870 PF00809 Pterin binding enzyme ITG12_12870 PF02310 B12 binding domain ITG12_12870 PF02607 B12 binding domain ITG12_12870 PF02965 Vitamin B12 dependent methionine synthase, activation domain ITG12_12870 PF02574 Homocysteine S-methyltransferase ITG12_12875 PF00696 Amino acid kinase family ITG12_12875 PF01842 ACT domain ITG12_12880 PF00266 Aminotransferase class-V ITG12_12890 PF17760 UvrA interaction domain ITG12_12890 PF00005 ABC transporter ITG12_12890 PF17755 UvrA DNA-binding domain ITG12_12895 PF00483 Nucleotidyl transferase ITG12_12900 PF00196 Bacterial regulatory proteins, luxR family ITG12_12905 PF00436 Single-strand binding protein family ITG12_12915 PF00563 EAL domain ITG12_12915 PF00990 Diguanylate cyclase, GGDEF domain ITG12_12915 PF17157 Gammaproteobacterial periplasmic sensor domain ITG12_12935 PF03958 Bacterial type II/III secretion system short domain ITG12_12935 PF00263 Bacterial type II and III secretion system protein ITG12_12940 PF13401 AAA domain ITG12_12940 PF01471 Putative peptidoglycan binding domain ITG12_12950 PF00437 Type II/IV secretion system protein ITG12_12950 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ITG12_12955 PF00482 Type II secretion system (T2SS), protein F ITG12_12965 PF07963 Prokaryotic N-terminal methylation motif ITG12_13005 PF04085 rod shape-determining protein MreC ITG12_13010 PF04093 rod shape-determining protein MreD ITG12_13015 PF02545 Maf-like protein ITG12_13020 PF00575 S1 RNA binding domain ITG12_13020 PF10150 Ribonuclease E/G family ITG12_13025 PF13116 Protein of unknown function ITG12_13025 PF13502 AsmA-like C-terminal region ITG12_13030 PF00795 Carbon-nitrogen hydrolase ITG12_13035 PF01523 Putative modulator of DNA gyrase ITG12_13040 PF02562 PhoH-like protein ITG12_13040 PF13638 PIN domain ITG12_13045 PF00271 Helicase conserved C-terminal domain ITG12_13045 PF12137 RNA polymerase recycling family C-terminal ITG12_13045 PF00176 SNF2 family N-terminal domain ITG12_13045 PF18339 RapA N-terminal Tudor like domain 1 ITG12_13045 PF18337 RapA N-terminal Tudor like domain ITG12_13055 PF00849 RNA pseudouridylate synthase ITG12_13060 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ITG12_13060 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ITG12_13065 PF04751 Protein of unknown function (DUF615) ITG12_13070 PF01523 Putative modulator of DNA gyrase ITG12_13075 PF03448 MgtE intracellular N domain ITG12_13075 PF00571 CBS domain ITG12_13075 PF01769 Divalent cation transporter ITG12_13080 PF00381 PTS HPr component phosphorylation site ITG12_13085 PF03668 P-loop ATPase protein family ITG12_13090 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ITG12_13095 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ITG12_13100 PF00309 Sigma-54 factor, Activator interacting domain (AID) ITG12_13100 PF04963 Sigma-54 factor, core binding domain ITG12_13100 PF04552 Sigma-54, DNA binding domain ITG12_13105 PF12399 Branched-chain amino acid ATP-binding cassette transporter ITG12_13105 PF00005 ABC transporter ITG12_13110 PF03968 OstA-like protein ITG12_13120 PF01380 SIS domain ITG12_13120 PF00571 CBS domain ITG12_13125 PF01699 Sodium/calcium exchanger protein ITG12_13130 PF00005 ABC transporter ITG12_13135 PF02405 Permease MlaE ITG12_13140 PF02470 MlaD protein ITG12_13145 PF05494 MlaC protein ITG12_13155 PF01722 BolA-like protein ITG12_13160 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ITG12_13165 PF01553 Acyltransferase ITG12_13170 PF01042 Endoribonuclease L-PSP ITG12_13175 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain ITG12_13175 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain ITG12_13180 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ITG12_13180 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ITG12_13185 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ITG12_13185 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ITG12_13200 PF06877 Regulator of ribonuclease activity B ITG12_13210 PF00583 Acetyltransferase (GNAT) family ITG12_13220 PF10458 Valyl tRNA synthetase tRNA binding arm ITG12_13220 PF00133 tRNA synthetases class I (I, L, M and V) ITG12_13220 PF08264 Anticodon-binding domain of tRNA ITG12_13225 PF04364 DNA polymerase III chi subunit, HolC ITG12_13230 PF00883 Cytosol aminopeptidase family, catalytic domain ITG12_13230 PF02789 Cytosol aminopeptidase family, N-terminal domain ITG12_13235 PF03739 Lipopolysaccharide export system permease LptF/LptG ITG12_13240 PF03739 Lipopolysaccharide export system permease LptF/LptG ITG12_13250 PF00106 short chain dehydrogenase ITG12_13260 PF01522 Polysaccharide deacetylase ITG12_13265 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ITG12_13270 PF02378 Phosphotransferase system, EIIC ITG12_13275 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit ITG12_13280 PF02056 Family 4 glycosyl hydrolase ITG12_13280 PF11975 Family 4 glycosyl hydrolase C-terminal domain ITG12_13285 PF04794 YdjC-like protein ITG12_13290 PF00356 Bacterial regulatory proteins, lacI family ITG12_13340 PF00872 Transposase, Mutator family ITG12_13345 PF00171 Aldehyde dehydrogenase family ITG12_13375 PF00672 HAMP domain ITG12_13375 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG12_13375 PF17200 Single Cache domain 2 ITG12_13415 PF01464 Transglycosylase SLT domain ITG12_13415 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain ITG12_13420 PF04362 Bacterial Fe(2+) trafficking ITG12_13425 PF00730 HhH-GPD superfamily base excision DNA repair protein ITG12_13425 PF14815 NUDIX domain ITG12_13425 PF00633 Helix-hairpin-helix motif ITG12_13430 PF02390 Putative methyltransferase ITG12_13435 PF02086 D12 class N6 adenine-specific DNA methyltransferase ITG12_13440 PF04960 Glutaminase ITG12_13445 PF04055 Radical SAM superfamily ITG12_13445 PF06969 HemN C-terminal domain ITG12_13450 PF01725 Ham1 family ITG12_13460 PF02594 Uncharacterised ACR, YggU family COG1872 ITG12_13465 PF02325 YGGT family ITG12_13470 PF03807 NADP oxidoreductase coenzyme F420-dependent ITG12_13470 PF14748 Pyrroline-5-carboxylate reductase dimerisation ITG12_13475 PF01168 Alanine racemase, N-terminal domain ITG12_13480 PF00437 Type II/IV secretion system protein ITG12_13485 PF00437 Type II/IV secretion system protein ITG12_13490 PF03652 Holliday junction resolvase ITG12_13495 PF02622 Uncharacterized ACR, COG1678 ITG12_13500 PF02951 Prokaryotic glutathione synthetase, N-terminal domain ITG12_13500 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain ITG12_13505 PF04452 RNA methyltransferase ITG12_13510 PF04231 Endonuclease I ITG12_13515 PF10263 SprT-like family ITG12_13515 PF17283 SprT-like zinc ribbon domain ITG12_13525 PF02772 S-adenosylmethionine synthetase, central domain ITG12_13525 PF00438 S-adenosylmethionine synthetase, N-terminal domain ITG12_13525 PF02773 S-adenosylmethionine synthetase, C-terminal domain ITG12_13530 PF00456 Transketolase, thiamine diphosphate binding domain ITG12_13530 PF02779 Transketolase, pyrimidine binding domain ITG12_13530 PF02780 Transketolase, C-terminal domain ITG12_13540 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ITG12_13540 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ITG12_13545 PF00162 Phosphoglycerate kinase ITG12_13550 PF01116 Fructose-bisphosphate aldolase class-II ITG12_13555 PF05552 Conserved TM helix ITG12_13555 PF00924 Mechanosensitive ion channel ITG12_13565 PF01810 LysE type translocator ITG12_13570 PF03466 LysR substrate binding domain ITG12_13570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_13575 PF04402 Protein of unknown function (DUF541) ITG12_13580 PF01842 ACT domain ITG12_13580 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ITG12_13580 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ITG12_13585 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ITG12_13590 PF01812 5-formyltetrahydrofolate cyclo-ligase family ITG12_13600 PF05164 Cell division protein ZapA ITG12_13605 PF03695 Uncharacterised protein family (UPF0149) ITG12_13610 PF01494 FAD binding domain ITG12_13615 PF01494 FAD binding domain ITG12_13635 PF03937 Flavinator of succinate dehydrogenase ITG12_13645 PF02910 Fumarate reductase flavoprotein C-term ITG12_13645 PF00890 FAD binding domain ITG12_13650 PF08281 Sigma-70, region 4 ITG12_13650 PF04542 Sigma-70 region 2 ITG12_13655 PF03872 Anti sigma-E protein RseA, N-terminal domain ITG12_13655 PF03873 Anti sigma-E protein RseA, C-terminal domain ITG12_13660 PF17188 MucB/RseB C-terminal domain ITG12_13660 PF03888 MucB/RseB N-terminal domain ITG12_13670 PF06421 GTP-binding protein LepA C-terminus ITG12_13670 PF03144 Elongation factor Tu domain 2 ITG12_13670 PF00009 Elongation factor Tu GTP binding domain ITG12_13670 PF00679 Elongation factor G C-terminus ITG12_13675 PF10502 Signal peptidase, peptidase S26 ITG12_13680 PF14622 Ribonuclease-III-like ITG12_13680 PF00035 Double-stranded RNA binding motif ITG12_13685 PF07650 KH domain ITG12_13685 PF01926 50S ribosome-binding GTPase ITG12_13690 PF02565 Recombination protein O C terminal ITG12_13690 PF11967 Recombination protein O N terminal ITG12_13695 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ ITG12_13700 PF01648 4'-phosphopantetheinyl transferase superfamily ITG12_13705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_13705 PF00512 His Kinase A (phospho-acceptor) domain ITG12_13705 PF01627 Hpt domain ITG12_13705 PF00672 HAMP domain ITG12_13705 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ITG12_13705 PF00072 Response regulator receiver domain ITG12_13710 PF01938 TRAM domain ITG12_13710 PF05958 tRNA (Uracil-5-)-methyltransferase ITG12_13715 PF13291 ACT domain ITG12_13715 PF04607 Region found in RelA / SpoT proteins ITG12_13715 PF02824 TGS domain ITG12_13720 PF03819 MazG nucleotide pyrophosphohydrolase domain ITG12_13725 PF06418 CTP synthase N-terminus ITG12_13725 PF00117 Glutamine amidotransferase class-I ITG12_13730 PF00113 Enolase, C-terminal TIM barrel domain ITG12_13730 PF03952 Enolase, N-terminal domain ITG12_13735 PF04977 Septum formation initiator ITG12_13740 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ITG12_13745 PF02542 YgbB family ITG12_13750 PF01142 tRNA pseudouridine synthase D (TruD) ITG12_13755 PF01975 Survival protein SurE ITG12_13765 PF01551 Peptidase family M23 ITG12_13765 PF01476 LysM domain ITG12_13770 PF04545 Sigma-70, region 4 ITG12_13770 PF04539 Sigma-70 region 3 ITG12_13770 PF04542 Sigma-70 region 2 ITG12_13770 PF00140 Sigma-70 factor, region 1.2 ITG12_13775 PF05190 MutS family domain IV ITG12_13775 PF05192 MutS domain III ITG12_13775 PF05188 MutS domain II ITG12_13775 PF01624 MutS domain I ITG12_13775 PF00488 MutS domain V ITG12_13780 PF02464 Competence-damaged protein ITG12_13785 PF00154 recA bacterial DNA recombination protein ITG12_13790 PF02631 RecX family ITG12_13795 PF01411 tRNA synthetases class II (A) ITG12_13795 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ITG12_13795 PF02272 DHHA1 domain ITG12_13800 PF13840 ACT domain ITG12_13800 PF00696 Amino acid kinase family ITG12_13800 PF01842 ACT domain ITG12_13805 PF02599 Global regulator protein family ITG12_13885 PF00196 Bacterial regulatory proteins, luxR family ITG12_13890 PF04277 Oxaloacetate decarboxylase, gamma chain ITG12_13895 PF00364 Biotin-requiring enzyme ITG12_13895 PF00682 HMGL-like ITG12_13895 PF02436 Conserved carboxylase domain ITG12_13900 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit ITG12_13905 PF08240 Alcohol dehydrogenase GroES-like domain ITG12_13905 PF00107 Zinc-binding dehydrogenase ITG12_13910 PF09335 SNARE associated Golgi protein ITG12_13915 PF05193 Peptidase M16 inactive domain ITG12_13915 PF00675 Insulinase (Peptidase family M16) ITG12_13920 PF04262 Glutamate-cysteine ligase ITG12_13930 PF02664 S-Ribosylhomocysteinase (LuxS) ITG12_13935 PF00571 CBS domain ITG12_13935 PF03471 Transporter associated domain ITG12_13935 PF01595 Cyclin M transmembrane N-terminal domain ITG12_13940 PF01578 Cytochrome C assembly protein ITG12_13945 PF00448 SRP54-type protein, GTPase domain ITG12_13945 PF02881 SRP54-type protein, helical bundle domain ITG12_13945 PF02978 Signal peptide binding domain ITG12_13950 PF00886 Ribosomal protein S16 ITG12_13955 PF01782 RimM N-terminal domain ITG12_13955 PF05239 PRC-barrel domain ITG12_13960 PF01746 tRNA (Guanine-1)-methyltransferase ITG12_13965 PF01245 Ribosomal protein L19 ITG12_13970 PF03884 DNA gyrase inhibitor YacG ITG12_13975 PF07072 Cell division protein ITG12_13980 PF01121 Dephospho-CoA kinase ITG12_13985 PF01478 Type IV leader peptidase family ITG12_13985 PF06750 Bacterial Peptidase A24 N-terminal domain ITG12_13990 PF00482 Type II secretion system (T2SS), protein F ITG12_13995 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain ITG12_13995 PF00437 Type II/IV secretion system protein ITG12_14000 PF00114 Pilin (bacterial filament) ITG12_14000 PF07963 Prokaryotic N-terminal methylation motif ITG12_14005 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ITG12_14005 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ITG12_14010 PF01510 N-acetylmuramoyl-L-alanine amidase ITG12_14015 PF07729 FCD domain ITG12_14015 PF00392 Bacterial regulatory proteins, gntR family ITG12_14020 PF00456 Transketolase, thiamine diphosphate binding domain ITG12_14020 PF17831 Pyruvate dehydrogenase E1 component middle domain ITG12_14025 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ITG12_14025 PF00364 Biotin-requiring enzyme ITG12_14025 PF02817 e3 binding domain ITG12_14030 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ITG12_14030 PF07992 Pyridine nucleotide-disulphide oxidoreductase ITG12_14035 PF00440 Bacterial regulatory proteins, tetR family ITG12_14040 PF00156 Phosphoribosyl transferase domain ITG12_14045 PF00484 Carbonic anhydrase ITG12_14050 PF01740 STAS domain ITG12_14050 PF00916 Sulfate permease family ITG12_14055 PF00005 ABC transporter ITG12_14060 PF01061 ABC-2 type transporter ITG12_14065 PF03279 Bacterial lipid A biosynthesis acyltransferase ITG12_14070 PF02569 Pantoate-beta-alanine ligase ITG12_14075 PF02548 Ketopantoate hydroxymethyltransferase ITG12_14080 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ITG12_14085 PF12626 Polymerase A arginine-rich C-terminus ITG12_14085 PF01743 Poly A polymerase head domain ITG12_14085 PF12627 Probable RNA and SrmB- binding site of polymerase A ITG12_14090 PF00749 tRNA synthetases class I (E and Q), catalytic domain ITG12_14095 PF01258 Prokaryotic dksA/traR C4-type zinc finger ITG12_14100 PF03749 Sugar fermentation stimulation protein RE domain ITG12_14100 PF17746 SfsA N-terminal OB domain ITG12_14105 PF08482 ATP-dependent helicase C-terminal ITG12_14105 PF00271 Helicase conserved C-terminal domain ITG12_14105 PF00270 DEAD/DEAH box helicase ITG12_14105 PF04408 Helicase associated domain (HA2) ITG12_14110 PF00912 Transglycosylase ITG12_14110 PF00905 Penicillin binding protein transpeptidase domain ITG12_14110 PF14814 Bifunctional transglycosylase second domain ITG12_14115 PF01734 Patatin-like phospholipase ITG12_14120 PF00330 Aconitase family (aconitate hydratase) ITG12_14120 PF06434 Aconitate hydratase 2 N-terminus ITG12_14120 PF11791 Aconitate B N-terminal domain ITG12_14125 PF06062 Uncharacterised protein family (UPF0231) ITG12_14130 PF00543 Nitrogen regulatory protein P-II ITG12_14135 PF00909 Ammonium Transporter Family ITG12_14140 PF13416 Bacterial extracellular solute-binding protein ITG12_14150 PF08402 TOBE domain ITG12_14150 PF00005 ABC transporter ITG12_14155 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ITG12_14155 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ITG12_14155 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ITG12_14155 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ITG12_14160 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain ITG12_14160 PF06165 Glycosyltransferase family 36 ITG12_14165 PF02838 Glycosyl hydrolase family 20, domain 2 ITG12_14165 PF00728 Glycosyl hydrolase family 20, catalytic domain ITG12_14170 PF01869 BadF/BadG/BcrA/BcrD ATPase family ITG12_14180 PF00005 ABC transporter ITG12_14180 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ITG12_14185 PF00005 ABC transporter ITG12_14185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ITG12_14190 PF12911 N-terminal TM domain of oligopeptide transport permease C ITG12_14190 PF00528 Binding-protein-dependent transport system inner membrane component ITG12_14195 PF00528 Binding-protein-dependent transport system inner membrane component ITG12_14200 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ITG12_14205 PF00072 Response regulator receiver domain ITG12_14205 PF09308 LuxQ, periplasmic ITG12_14205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_14205 PF00512 His Kinase A (phospho-acceptor) domain ITG12_14210 PF05175 Methyltransferase small domain ITG12_14210 PF08468 Methyltransferase small domain N-terminal ITG12_14215 PF01594 AI-2E family transporter ITG12_14220 PF00202 Aminotransferase class-III ITG12_14225 PF01521 Iron-sulphur cluster biosynthesis ITG12_14230 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ITG12_14235 PF00873 AcrB/AcrD/AcrF family ITG12_14240 PF01551 Peptidase family M23 ITG12_14240 PF08525 Opacity-associated protein A N-terminal motif ITG12_14240 PF01476 LysM domain ITG12_14245 PF00579 tRNA synthetases class I (W and Y) ITG12_14255 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family ITG12_14260 PF13609 Gram-negative porin ITG12_14265 PF03449 Transcription elongation factor, N-terminal ITG12_14265 PF01272 Transcription elongation factor, GreA/GreB, C-term ITG12_14270 PF01985 CRS1 / YhbY (CRM) domain ITG12_14275 PF01728 FtsJ-like methyltransferase ITG12_14280 PF00004 ATPase family associated with various cellular activities (AAA) ITG12_14280 PF17862 AAA+ lid domain ITG12_14280 PF06480 FtsH Extracellular ITG12_14280 PF01434 Peptidase family M41 ITG12_14285 PF00809 Pterin binding enzyme ITG12_14290 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ITG12_14290 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ITG12_14290 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ITG12_14290 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ITG12_14295 PF03840 Preprotein translocase SecG subunit ITG12_14310 PF02576 RimP N-terminal domain ITG12_14310 PF17384 RimP C-terminal SH3 domain ITG12_14315 PF00575 S1 RNA binding domain ITG12_14315 PF08529 NusA N-terminal domain ITG12_14315 PF13184 NusA-like KH domain ITG12_14320 PF11987 Translation-initiation factor 2 ITG12_14320 PF08364 Bacterial translation initiation factor IF-2 associated region ITG12_14320 PF00009 Elongation factor Tu GTP binding domain ITG12_14320 PF04760 Translation initiation factor IF-2, N-terminal region ITG12_14325 PF02033 Ribosome-binding factor A ITG12_14330 PF09157 Pseudouridine synthase II TruB, C-terminal ITG12_14330 PF16198 tRNA pseudouridylate synthase B C-terminal domain ITG12_14330 PF01509 TruB family pseudouridylate synthase (N terminal domain) ITG12_14335 PF00312 Ribosomal protein S15 ITG12_14340 PF00575 S1 RNA binding domain ITG12_14340 PF03725 3' exoribonuclease family, domain 2 ITG12_14340 PF01138 3' exoribonuclease family, domain 1 ITG12_14340 PF00013 KH domain ITG12_14340 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ITG12_14345 PF13181 Tetratricopeptide repeat ITG12_14345 PF07719 Tetratricopeptide repeat ITG12_14355 PF01554 MatE ITG12_14360 PF01136 Peptidase family U32 ITG12_14365 PF01136 Peptidase family U32 ITG12_14370 PF00563 EAL domain ITG12_14370 PF00990 Diguanylate cyclase, GGDEF domain ITG12_14370 PF03707 Bacterial signalling protein N terminal repeat ITG12_14375 PF02036 SCP-2 sterol transfer family ITG12_14380 PF13508 Acetyltransferase (GNAT) domain ITG12_14400 PF03144 Elongation factor Tu domain 2 ITG12_14400 PF16658 Class II release factor RF3, C-terminal domain ITG12_14400 PF00009 Elongation factor Tu GTP binding domain ITG12_14410 PF01026 TatD related DNase ITG12_14415 PF01773 Na+ dependent nucleoside transporter N-terminus ITG12_14415 PF07662 Na+ dependent nucleoside transporter C-terminus ITG12_14415 PF07670 Nucleoside recognition ITG12_14420 PF01791 DeoC/LacD family aldolase ITG12_14425 PF02885 Glycosyl transferase family, helical bundle domain ITG12_14425 PF00591 Glycosyl transferase family, a/b domain ITG12_14425 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain ITG12_14430 PF01676 Metalloenzyme superfamily ITG12_14435 PF01048 Phosphorylase superfamily ITG12_14445 PF18429 Domain of unknown function (DUF5609) ITG12_14455 PF18073 Rubredoxin metal binding domain ITG12_14460 PF03144 Elongation factor Tu domain 2 ITG12_14460 PF03764 Elongation factor G, domain IV ITG12_14460 PF00009 Elongation factor Tu GTP binding domain ITG12_14460 PF00679 Elongation factor G C-terminus ITG12_14460 PF14492 Elongation Factor G, domain II ITG12_14465 PF03466 LysR substrate binding domain ITG12_14465 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_14500 PF00501 AMP-binding enzyme ITG12_14505 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain ITG12_14505 PF01464 Transglycosylase SLT domain ITG12_14530 PF00263 Bacterial type II and III secretion system protein ITG12_14530 PF04972 BON domain ITG12_14530 PF13629 Pilus formation protein N terminal region ITG12_14545 PF00437 Type II/IV secretion system protein ITG12_14580 PF00691 OmpA family ITG12_14580 PF05736 OprF membrane domain ITG12_14590 PF03466 LysR substrate binding domain ITG12_14590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_14595 PF01204 Trehalase ITG12_14605 PF13520 Amino acid permease ITG12_14610 PF04074 YhcH/YjgK/YiaL ITG12_14615 PF02837 Glycosyl hydrolases family 2, sugar binding domain ITG12_14615 PF02929 Beta galactosidase small chain ITG12_14615 PF00703 Glycosyl hydrolases family 2 ITG12_14615 PF16353 Domain of unknown function(DUF4981) ITG12_14615 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ITG12_14620 PF00356 Bacterial regulatory proteins, lacI family ITG12_14625 PF00905 Penicillin binding protein transpeptidase domain ITG12_14625 PF03717 Penicillin-binding Protein dimerisation domain ITG12_14630 PF16363 GDP-mannose 4,6 dehydratase ITG12_14635 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain ITG12_14635 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain ITG12_14640 PF10509 Galactokinase galactose-binding signature ITG12_14640 PF08544 GHMP kinases C terminal ITG12_14640 PF00288 GHMP kinases N terminal domain ITG12_14645 PF01263 Aldose 1-epimerase ITG12_14650 PF00356 Bacterial regulatory proteins, lacI family ITG12_14655 PF00367 phosphotransferase system, EIIB ITG12_14655 PF02378 Phosphotransferase system, EIIC ITG12_14665 PF01588 Putative tRNA binding domain ITG12_14685 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain ITG12_14685 PF01464 Transglycosylase SLT domain ITG12_14690 PF01266 FAD dependent oxidoreductase ITG12_14690 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ITG12_14695 PF08220 DeoR-like helix-turn-helix domain ITG12_14695 PF00455 DeoR C terminal sensor domain ITG12_14700 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ITG12_14700 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ITG12_14705 PF00230 Major intrinsic protein ITG12_14710 PF07690 Major Facilitator Superfamily ITG12_14715 PF03009 Glycerophosphoryl diester phosphodiesterase family ITG12_14730 PF14602 Hexapeptide repeat of succinyl-transferase ITG12_14730 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle ITG12_14745 PF07130 YebG protein ITG12_14750 PF03466 LysR substrate binding domain ITG12_14750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_14760 PF04226 Transglycosylase associated protein ITG12_14770 PF17946 RecC C-terminal domain ITG12_14775 PF12705 PD-(D/E)XK nuclease superfamily ITG12_14775 PF00580 UvrD/REP helicase N-terminal domain ITG12_14775 PF13361 UvrD-like helicase C-terminal domain ITG12_14780 PF13538 UvrD-like helicase C-terminal domain ITG12_14800 PF00696 Amino acid kinase family ITG12_14800 PF00583 Acetyltransferase (GNAT) family ITG12_14810 PF06725 3D domain ITG12_14810 PF03562 MltA specific insert domain ITG12_14815 PF00899 ThiF family ITG12_14820 PF02657 Fe-S metabolism associated domain ITG12_14825 PF00266 Aminotransferase class-V ITG12_14830 PF01965 DJ-1/PfpI family ITG12_14835 PF08546 Ketopantoate reductase PanE/ApbA C terminal ITG12_14835 PF02558 Ketopantoate reductase PanE/ApbA ITG12_14840 PF03502 Nucleoside-specific channel-forming protein, Tsx ITG12_14855 PF04542 Sigma-70 region 2 ITG12_14855 PF04545 Sigma-70, region 4 ITG12_14865 PF07690 Major Facilitator Superfamily ITG12_14870 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ITG12_14880 PF05175 Methyltransferase small domain ITG12_14885 PF01722 BolA-like protein ITG12_14890 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) ITG12_14890 PF11973 NQRA C-terminal domain ITG12_14895 PF03116 NQR2, RnfD, RnfE family ITG12_14900 PF04205 FMN-binding domain ITG12_14905 PF02508 Rnf-Nqr subunit, membrane protein ITG12_14910 PF02508 Rnf-Nqr subunit, membrane protein ITG12_14915 PF00175 Oxidoreductase NAD-binding domain ITG12_14915 PF00970 Oxidoreductase FAD-binding domain ITG12_14915 PF00111 2Fe-2S iron-sulfur cluster binding domain ITG12_14920 PF02424 ApbE family ITG12_14930 PF00990 Diguanylate cyclase, GGDEF domain ITG12_14930 PF00072 Response regulator receiver domain ITG12_14935 PF00817 impB/mucB/samB family ITG12_14935 PF11799 impB/mucB/samB family C-terminal domain ITG12_14935 PF11798 IMS family HHH motif ITG12_14940 PF00270 DEAD/DEAH box helicase ITG12_14940 PF00271 Helicase conserved C-terminal domain ITG12_14940 PF00570 HRDC domain ITG12_14940 PF16124 RecQ zinc-binding ITG12_14940 PF09382 RQC domain ITG12_14945 PF01272 Transcription elongation factor, GreA/GreB, C-term ITG12_14945 PF03449 Transcription elongation factor, N-terminal ITG12_14955 PF00041 Fibronectin type III domain ITG12_14955 PF00704 Glycosyl hydrolases family 18 ITG12_14960 PF00209 Sodium:neurotransmitter symporter family ITG12_14970 PF06786 Uncharacterised protein family (UPF0253) ITG12_14980 PF04073 Aminoacyl-tRNA editing domain ITG12_14980 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ITG12_14980 PF03129 Anticodon binding domain ITG12_14985 PF01980 tRNA-methyltransferase O ITG12_14985 PF18389 TrmO C-terminal domain ITG12_14990 PF01197 Ribosomal protein L31 ITG12_14995 PF00444 Ribosomal protein L36 ITG12_15000 PF03806 AbgT putative transporter family ITG12_15010 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ITG12_15035 PF04287 tRNA pseudouridine synthase C ITG12_15040 PF00849 RNA pseudouridylate synthase ITG12_15045 PF11944 Protein of unknown function (DUF3461) ITG12_15050 PF01842 ACT domain ITG12_15050 PF08335 GlnD PII-uridylyltransferase ITG12_15050 PF01966 HD domain ITG12_15050 PF01909 Nucleotidyltransferase domain ITG12_15055 PF00557 Metallopeptidase family M24 ITG12_15060 PF00318 Ribosomal protein S2 ITG12_15065 PF00889 Elongation factor TS ITG12_15070 PF00696 Amino acid kinase family ITG12_15075 PF01765 Ribosome recycling factor ITG12_15080 PF01255 Putative undecaprenyl diphosphate synthase ITG12_15090 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ITG12_15090 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ITG12_15090 PF13288 DXP reductoisomerase C-terminal domain ITG12_15095 PF17820 PDZ domain ITG12_15095 PF02163 Peptidase family M50 ITG12_15100 PF07244 Surface antigen variable number repeat ITG12_15100 PF01103 Surface antigen ITG12_15105 PF03938 Outer membrane protein (OmpH-like) ITG12_15110 PF00132 Bacterial transferase hexapeptide (six repeats) ITG12_15110 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD ITG12_15115 PF07977 FabA-like domain ITG12_15120 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 ITG12_15120 PF00132 Bacterial transferase hexapeptide (six repeats) ITG12_15125 PF02684 Lipid-A-disaccharide synthetase ITG12_15130 PF01351 Ribonuclease HII ITG12_15135 PF07733 Bacterial DNA polymerase III alpha NTPase domain ITG12_15135 PF01336 OB-fold nucleic acid binding domain ITG12_15135 PF02811 PHP domain ITG12_15135 PF14579 Helix-hairpin-helix motif ITG12_15135 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ITG12_15140 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ITG12_15145 PF01171 PP-loop family ITG12_15145 PF09179 TilS substrate binding domain ITG12_15145 PF11734 TilS substrate C-terminal domain ITG12_15150 PF00034 Cytochrome c ITG12_15155 PF00543 Nitrogen regulatory protein P-II ITG12_15170 PF01476 LysM domain ITG12_15170 PF01464 Transglycosylase SLT domain ITG12_15175 PF16123 Hydroxyacylglutathione hydrolase C-terminus ITG12_15180 PF08241 Methyltransferase domain ITG12_15185 PF00075 RNase H ITG12_15190 PF00929 Exonuclease ITG12_15225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ITG12_15225 PF09317 Domain of unknown function (DUF1974) ITG12_15225 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ITG12_15225 PF02770 Acyl-CoA dehydrogenase, middle domain ITG12_15230 PF13580 SIS domain ITG12_15235 PF13230 Glutamine amidotransferases class-II ITG12_15240 PF00551 Formyl transferase ITG12_15245 PF02769 AIR synthase related protein, C-terminal domain ITG12_15245 PF00586 AIR synthase related protein, N-terminal domain ITG12_15255 PF00860 Permease family ITG12_15270 PF03358 NADPH-dependent FMN reductase ITG12_15275 PF03960 ArsC family ITG12_15280 PF13181 Tetratricopeptide repeat ITG12_15280 PF01435 Peptidase family M48 ITG12_15290 PF01594 AI-2E family transporter ITG12_15300 PF00578 AhpC/TSA family ITG12_15305 PF00872 Transposase, Mutator family ITG12_15345 PF00578 AhpC/TSA family ITG12_15375 PF01842 ACT domain ITG12_15380 PF00701 Dihydrodipicolinate synthetase family ITG12_15385 PF06804 NlpB/DapX lipoprotein ITG12_15400 PF07687 Peptidase dimerisation domain ITG12_15400 PF01546 Peptidase family M20/M25/M40 ITG12_15405 PF03960 ArsC family ITG12_15425 PF11143 Protein of unknown function (DUF2919) ITG12_15430 PF04261 Dyp-type peroxidase family ITG12_15435 PF12833 Helix-turn-helix domain ITG12_15440 PF02056 Family 4 glycosyl hydrolase ITG12_15440 PF11975 Family 4 glycosyl hydrolase C-terminal domain ITG12_15455 PF00700 Bacterial flagellin C-terminal helical region ITG12_15455 PF07196 Flagellin hook IN motif ITG12_15455 PF00669 Bacterial flagellin N-terminal helical region ITG12_15460 PF07196 Flagellin hook IN motif ITG12_15460 PF00700 Bacterial flagellin C-terminal helical region ITG12_15460 PF00669 Bacterial flagellin N-terminal helical region ITG12_15465 PF07196 Flagellin hook IN motif ITG12_15465 PF00669 Bacterial flagellin N-terminal helical region ITG12_15465 PF00700 Bacterial flagellin C-terminal helical region ITG12_15470 PF03646 FlaG protein ITG12_15475 PF07195 Flagellar hook-associated protein 2 C-terminus ITG12_15475 PF02465 Flagellar hook-associated protein 2 N-terminus ITG12_15475 PF07196 Flagellin hook IN motif ITG12_15485 PF02561 Flagellar protein FliS ITG12_15490 PF02954 Bacterial regulatory protein, Fis family ITG12_15490 PF06490 Flagellar regulatory protein FleQ ITG12_15490 PF00158 Sigma-54 interaction domain ITG12_15495 PF13188 PAS domain ITG12_15495 PF00512 His Kinase A (phospho-acceptor) domain ITG12_15495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_15500 PF00072 Response regulator receiver domain ITG12_15500 PF02954 Bacterial regulatory protein, Fis family ITG12_15500 PF00158 Sigma-54 interaction domain ITG12_15505 PF02049 Flagellar hook-basal body complex protein FliE ITG12_15510 PF01514 Secretory protein of YscJ/FliF family ITG12_15510 PF08345 Flagellar M-ring protein C-terminal ITG12_15515 PF01706 FliG C-terminal domain ITG12_15515 PF14841 FliG middle domain ITG12_15515 PF14842 FliG N-terminal domain ITG12_15525 PF18269 T3SS EscN ATPase C-terminal domain ITG12_15525 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ITG12_15550 PF02154 Flagellar motor switch protein FliM ITG12_15550 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ITG12_15555 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ITG12_15560 PF04347 Flagellar biosynthesis protein, FliO ITG12_15565 PF00813 FliP family ITG12_15570 PF01313 Bacterial export proteins, family 3 ITG12_15575 PF01311 Bacterial export proteins, family 1 ITG12_15580 PF01312 FlhB HrpN YscU SpaS Family ITG12_15585 PF00771 FHIPEP family ITG12_15590 PF00448 SRP54-type protein, GTPase domain ITG12_15595 PF10609 NUBPL iron-transfer P-loop NTPase ITG12_15600 PF04539 Sigma-70 region 3 ITG12_15600 PF04545 Sigma-70, region 4 ITG12_15600 PF04542 Sigma-70 region 2 ITG12_15605 PF00072 Response regulator receiver domain ITG12_15610 PF04344 Chemotaxis phosphatase, CheZ ITG12_15615 PF01627 Hpt domain ITG12_15615 PF01584 CheW-like domain ITG12_15615 PF02895 Signal transducing histidine kinase, homodimeric domain ITG12_15615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_15615 PF00072 Response regulator receiver domain ITG12_15620 PF01339 CheB methylesterase ITG12_15620 PF00072 Response regulator receiver domain ITG12_15625 PF13614 AAA domain ITG12_15635 PF01584 CheW-like domain ITG12_15645 PF00005 ABC transporter ITG12_15650 PF03379 CcmB protein ITG12_15655 PF01578 Cytochrome C assembly protein ITG12_15665 PF03100 CcmE ITG12_15670 PF01578 Cytochrome C assembly protein ITG12_15670 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal ITG12_15675 PF08534 Redoxin ITG12_15680 PF03918 Cytochrome C biogenesis protein ITG12_15685 PF03918 Cytochrome C biogenesis protein ITG12_15690 PF04333 MlaA lipoprotein ITG12_15695 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ITG12_15700 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ITG12_15710 PF04542 Sigma-70 region 2 ITG12_15710 PF08281 Sigma-70, region 4 ITG12_15715 PF02803 Thiolase, C-terminal domain ITG12_15715 PF00108 Thiolase, N-terminal domain ITG12_15720 PF00378 Enoyl-CoA hydratase/isomerase ITG12_15720 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ITG12_15720 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ITG12_15730 PF00675 Insulinase (Peptidase family M16) ITG12_15730 PF16187 Middle or third domain of peptidase_M16 ITG12_15730 PF05193 Peptidase M16 inactive domain ITG12_15735 PF00300 Histidine phosphatase superfamily (branch 1) ITG12_15740 PF01713 Smr domain ITG12_15745 PF05175 Methyltransferase small domain ITG12_15750 PF01264 Chorismate synthase ITG12_15755 PF03458 UPF0126 domain ITG12_15760 PF04315 Elongation factor P hydroxylase ITG12_15765 PF08891 YfcL protein ITG12_15775 PF01266 FAD dependent oxidoreductase ITG12_15775 PF05430 S-adenosyl-L-methionine-dependent methyltransferase ITG12_15780 PF00109 Beta-ketoacyl synthase, N-terminal domain ITG12_15780 PF02801 Beta-ketoacyl synthase, C-terminal domain ITG12_15785 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ITG12_15785 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ITG12_15785 PF11890 Domain of unknown function (DUF3410) ITG12_15790 PF02774 Semialdehyde dehydrogenase, dimerisation domain ITG12_15790 PF01118 Semialdehyde dehydrogenase, NAD binding domain ITG12_15800 PF01416 tRNA pseudouridine synthase ITG12_15805 PF01039 Carboxyl transferase domain ITG12_15805 PF17848 Acetyl-coA carboxylase zinc finger domain ITG12_15810 PF08245 Mur ligase middle domain ITG12_15810 PF02875 Mur ligase family, glutamate ligase domain ITG12_15815 PF05036 Sporulation related domain ITG12_15820 PF02674 Colicin V production protein ITG12_15825 PF00156 Phosphoribosyl transferase domain ITG12_15830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_15830 PF03466 LysR substrate binding domain ITG12_15835 PF00072 Response regulator receiver domain ITG12_15840 PF04304 Protein of unknown function (DUF454) ITG12_15845 PF00156 Phosphoribosyl transferase domain ITG12_15850 PF12169 DNA polymerase III subunits gamma and tau domain III ITG12_15850 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding ITG12_15850 PF12170 DNA polymerase III tau subunit V interacting with alpha ITG12_15855 PF02575 YbaB/EbfC DNA-binding family ITG12_15860 PF02132 RecR protein ITG12_15860 PF13662 Toprim domain ITG12_15865 PF00230 Major intrinsic protein ITG12_15875 PF01042 Endoribonuclease L-PSP ITG12_15880 PF03313 Serine dehydratase alpha chain ITG12_15885 PF13309 HTH domain ITG12_15885 PF08348 YheO-like PAS domain ITG12_15890 PF03692 Putative zinc- or iron-chelating domain ITG12_15900 PF03692 Putative zinc- or iron-chelating domain ITG12_15905 PF04226 Transglycosylase associated protein ITG12_15910 PF06826 Predicted Permease Membrane Region ITG12_15915 PF00282 Pyridoxal-dependent decarboxylase conserved domain ITG12_15920 PF05552 Conserved TM helix ITG12_15920 PF00924 Mechanosensitive ion channel ITG12_15930 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ITG12_15940 PF00245 Alkaline phosphatase ITG12_15945 PF02028 BCCT, betaine/carnitine/choline family transporter ITG12_15960 PF13847 Methyltransferase domain ITG12_15965 PF13426 PAS domain ITG12_15965 PF08447 PAS fold ITG12_15965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG12_15970 PF01156 Inosine-uridine preferring nucleoside hydrolase ITG12_15980 PF01263 Aldose 1-epimerase ITG12_15985 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ITG12_15985 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ITG12_15990 PF01641 SelR domain ITG12_16000 PF07023 Protein of unknown function (DUF1315) ITG12_16005 PF17763 Glutaminase/Asparaginase C-terminal domain ITG12_16005 PF00710 Asparaginase, N-terminal ITG12_16010 PF01343 Peptidase family S49 ITG12_16015 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ITG12_16015 PF07992 Pyridine nucleotide-disulphide oxidoreductase ITG12_16020 PF00881 Nitroreductase family ITG12_16025 PF01751 Toprim domain ITG12_16025 PF01131 DNA topoisomerase ITG12_16035 PF00106 short chain dehydrogenase ITG12_16040 PF00850 Histone deacetylase domain ITG12_16045 PF05987 Bacterial protein of unknown function (DUF898) ITG12_16060 PF00884 Sulfatase ITG12_16060 PF11893 Domain of unknown function (DUF3413) ITG12_16065 PF07208 Protein of unknown function (DUF1414) ITG12_16070 PF04245 37-kD nucleoid-associated bacterial protein ITG12_16085 PF03553 Na+/H+ antiporter family ITG12_16090 PF02774 Semialdehyde dehydrogenase, dimerisation domain ITG12_16090 PF01118 Semialdehyde dehydrogenase, NAD binding domain ITG12_16095 PF07963 Prokaryotic N-terminal methylation motif ITG12_16100 PF00520 Ion transport protein ITG12_16100 PF00027 Cyclic nucleotide-binding domain ITG12_16105 PF01914 MarC family integral membrane protein ITG12_16110 PF00171 Aldehyde dehydrogenase family ITG12_16110 PF00465 Iron-containing alcohol dehydrogenase ITG12_16125 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ITG12_16125 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ITG12_16130 PF00462 Glutaredoxin ITG12_16140 PF13726 Na+-H+ antiporter family ITG12_16140 PF03553 Na+/H+ antiporter family ITG12_16145 PF00929 Exonuclease ITG12_16150 PF00691 OmpA family ITG12_16150 PF18393 MotY N-terminal domain ITG12_16155 PF10952 Protein of unknown function (DUF2753) ITG12_16160 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ITG12_16165 PF00730 HhH-GPD superfamily base excision DNA repair protein ITG12_16165 PF00633 Helix-hairpin-helix motif ITG12_16165 PF10576 Iron-sulfur binding domain of endonuclease III ITG12_16170 PF02508 Rnf-Nqr subunit, membrane protein ITG12_16175 PF04205 FMN-binding domain ITG12_16180 PF03116 NQR2, RnfD, RnfE family ITG12_16185 PF10531 SLBB domain ITG12_16185 PF13375 RnfC Barrel sandwich hybrid domain ITG12_16185 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit ITG12_16185 PF12838 4Fe-4S dicluster domain ITG12_16190 PF04060 Putative Fe-S cluster ITG12_16195 PF02508 Rnf-Nqr subunit, membrane protein ITG12_16200 PF01228 Glycine radical ITG12_16200 PF02901 Pyruvate formate lyase-like ITG12_16210 PF12344 Ultra-violet resistance protein B ITG12_16210 PF17757 UvrB interaction domain ITG12_16210 PF02151 UvrB/uvrC motif ITG12_16210 PF04851 Type III restriction enzyme, res subunit ITG12_16210 PF00271 Helicase conserved C-terminal domain ITG12_16215 PF02954 Bacterial regulatory protein, Fis family ITG12_16215 PF00072 Response regulator receiver domain ITG12_16215 PF00158 Sigma-54 interaction domain ITG12_16220 PF01627 Hpt domain ITG12_16225 PF01933 Uncharacterised protein family UPF0052 ITG12_16230 PF06463 Molybdenum Cofactor Synthesis C ITG12_16230 PF04055 Radical SAM superfamily ITG12_16235 PF00994 Probable molybdopterin binding domain ITG12_16240 PF01967 MoaC family ITG12_16245 PF02597 ThiS family ITG12_16250 PF02391 MoaE protein ITG12_16255 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ITG12_16260 PF00528 Binding-protein-dependent transport system inner membrane component ITG12_16265 PF12911 N-terminal TM domain of oligopeptide transport permease C ITG12_16265 PF00528 Binding-protein-dependent transport system inner membrane component ITG12_16270 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ITG12_16270 PF00005 ABC transporter ITG12_16275 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ITG12_16275 PF00005 ABC transporter ITG12_16280 PF13409 Glutathione S-transferase, N-terminal domain ITG12_16290 PF13194 Domain of unknown function (DUF4010) ITG12_16295 PF01515 Phosphate acetyl/butaryl transferase ITG12_16295 PF07085 DRTGG domain ITG12_16300 PF00871 Acetokinase family ITG12_16305 PF04217 Protein of unknown function, DUF412 ITG12_16315 PF02653 Branched-chain amino acid transport system / permease component ITG12_16320 PF00005 ABC transporter ITG12_16325 PF00128 Alpha amylase, catalytic domain ITG12_16325 PF02903 Alpha amylase, N-terminal ig-like domain ITG12_16330 PF00990 Diguanylate cyclase, GGDEF domain ITG12_16335 PF01207 Dihydrouridine synthase (Dus) ITG12_16340 PF02810 SEC-C motif ITG12_16340 PF03695 Uncharacterised protein family (UPF0149) ITG12_16345 PF02600 Disulfide bond formation protein DsbB ITG12_16350 PF06450 Bacterial Na+/H+ antiporter B (NhaB) ITG12_16355 PF07840 FadR C-terminal domain ITG12_16355 PF00392 Bacterial regulatory proteins, gntR family ITG12_16365 PF01588 Putative tRNA binding domain ITG12_16365 PF09334 tRNA synthetases class I (M) ITG12_16370 PF10609 NUBPL iron-transfer P-loop NTPase ITG12_16375 PF00485 Phosphoribulokinase / Uridine kinase family ITG12_16380 PF05170 AsmA family ITG12_16385 PF12557 Cob(I)alamin adenosyltransferase N terminal ITG12_16385 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP ITG12_16390 PF01451 Low molecular weight phosphotyrosine protein phosphatase ITG12_16395 PF00916 Sulfate permease family ITG12_16395 PF01740 STAS domain ITG12_16400 PF12111 Polyribonucleotide phosphorylase C terminal ITG12_16400 PF10150 Ribonuclease E/G family ITG12_16400 PF00575 S1 RNA binding domain ITG12_16405 PF00849 RNA pseudouridylate synthase ITG12_16405 PF01479 S4 domain ITG12_16410 PF02545 Maf-like protein ITG12_16415 PF02620 Large ribosomal RNA subunit accumulation protein YceD ITG12_16420 PF01783 Ribosomal L32p protein family ITG12_16425 PF02504 Fatty acid synthesis protein ITG12_16430 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ITG12_16430 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ITG12_16435 PF00698 Acyl transferase domain ITG12_16445 PF00550 Phosphopantetheine attachment site ITG12_16450 PF02801 Beta-ketoacyl synthase, C-terminal domain ITG12_16450 PF00109 Beta-ketoacyl synthase, N-terminal domain ITG12_16455 PF01063 Amino-transferase class IV ITG12_16460 PF02618 YceG-like family ITG12_16465 PF02223 Thymidylate kinase ITG12_16470 PF09115 DNA polymerase III, delta subunit, C terminal ITG12_16475 PF01026 TatD related DNase ITG12_16480 PF00367 phosphotransferase system, EIIB ITG12_16480 PF02378 Phosphotransferase system, EIIC ITG12_16495 PF00209 Sodium:neurotransmitter symporter family ITG12_16510 PF01734 Patatin-like phospholipase ITG12_16515 PF02887 Pyruvate kinase, alpha/beta domain ITG12_16515 PF00224 Pyruvate kinase, barrel domain ITG12_16520 PF00480 ROK family ITG12_16525 PF01584 CheW-like domain ITG12_16525 PF00072 Response regulator receiver domain ITG12_16530 PF14579 Helix-hairpin-helix motif ITG12_16530 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ITG12_16530 PF01336 OB-fold nucleic acid binding domain ITG12_16530 PF02811 PHP domain ITG12_16530 PF07733 Bacterial DNA polymerase III alpha NTPase domain ITG12_16545 PF00106 short chain dehydrogenase ITG12_16550 PF01343 Peptidase family S49 ITG12_16550 PF08496 Peptidase family S49 N-terminal ITG12_16555 PF08787 Alginate lyase ITG12_16560 PF02224 Cytidylate kinase ITG12_16565 PF00575 S1 RNA binding domain ITG12_16570 PF00216 Bacterial DNA-binding protein ITG12_16575 PF06305 Lipopolysaccharide assembly protein A domain ITG12_16580 PF18073 Rubredoxin metal binding domain ITG12_16585 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ITG12_16590 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ITG12_16595 PF01548 Transposase ITG12_16595 PF02371 Transposase IS116/IS110/IS902 family ITG12_16620 PF00884 Sulfatase ITG12_16625 PF00440 Bacterial regulatory proteins, tetR family ITG12_16625 PF16925 Tetracyclin repressor-like, C-terminal domain ITG12_16630 PF03886 ABC-type transport auxiliary lipoprotein component ITG12_16635 PF02470 MlaD protein ITG12_16640 PF04403 Paraquat-inducible protein A ITG12_16645 PF00356 Bacterial regulatory proteins, lacI family ITG12_16650 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ITG12_16655 PF00034 Cytochrome c ITG12_16660 PF01568 Molydopterin dinucleotide binding domain ITG12_16660 PF00384 Molybdopterin oxidoreductase ITG12_16660 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ITG12_16665 PF03916 Polysulphide reductase, NrfD ITG12_16670 PF13247 4Fe-4S dicluster domain ITG12_16675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_16675 PF00512 His Kinase A (phospho-acceptor) domain ITG12_16680 PF00196 Bacterial regulatory proteins, luxR family ITG12_16680 PF00072 Response regulator receiver domain ITG12_16685 PF02929 Beta galactosidase small chain ITG12_16685 PF16353 Domain of unknown function(DUF4981) ITG12_16685 PF00703 Glycosyl hydrolases family 2 ITG12_16685 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ITG12_16685 PF02837 Glycosyl hydrolases family 2, sugar binding domain ITG12_16695 PF02264 LamB porin ITG12_16700 PF16874 Glycosyl hydrolase family 36 C-terminal domain ITG12_16700 PF16875 Glycosyl hydrolase family 36 N-terminal domain ITG12_16710 PF01966 HD domain ITG12_16715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_16715 PF03466 LysR substrate binding domain ITG12_16725 PF11412 Disulphide bond corrector protein DsbC ITG12_16725 PF02683 Cytochrome C biogenesis protein transmembrane region ITG12_16730 PF00085 Thioredoxin ITG12_16755 PF00583 Acetyltransferase (GNAT) family ITG12_16760 PF00440 Bacterial regulatory proteins, tetR family ITG12_16770 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ITG12_16780 PF00005 ABC transporter ITG12_16780 PF02687 FtsX-like permease family ITG12_16780 PF12704 MacB-like periplasmic core domain ITG12_16785 PF12704 MacB-like periplasmic core domain ITG12_16785 PF00005 ABC transporter ITG12_16785 PF02687 FtsX-like permease family ITG12_16790 PF02687 FtsX-like permease family ITG12_16790 PF00005 ABC transporter ITG12_16790 PF12704 MacB-like periplasmic core domain ITG12_16795 PF03543 Yersinia/Haemophilus virulence surface antigen ITG12_16805 PF02811 PHP domain ITG12_16805 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ITG12_16805 PF07733 Bacterial DNA polymerase III alpha NTPase domain ITG12_16805 PF11490 DNA polymerase III polC-type N-terminus II ITG12_16805 PF00929 Exonuclease ITG12_16805 PF14579 Helix-hairpin-helix motif ITG12_16830 PF13333 Integrase core domain ITG12_16830 PF00665 Integrase core domain ITG12_16830 PF13276 HTH-like domain ITG12_16835 PF02743 Cache domain ITG12_16835 PF00672 HAMP domain ITG12_16835 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG12_16840 PF12849 PBP superfamily domain ITG12_16845 PF00528 Binding-protein-dependent transport system inner membrane component ITG12_16850 PF00528 Binding-protein-dependent transport system inner membrane component ITG12_16855 PF00005 ABC transporter ITG12_16870 PF13519 von Willebrand factor type A domain ITG12_16875 PF13519 von Willebrand factor type A domain ITG12_16885 PF01882 Protein of unknown function DUF58 ITG12_16890 PF17863 AAA lid domain ITG12_16890 PF07726 ATPase family associated with various cellular activities (AAA) ITG12_16910 PF02743 Cache domain ITG12_16910 PF00672 HAMP domain ITG12_16910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG12_16920 PF00196 Bacterial regulatory proteins, luxR family ITG12_16925 PF00196 Bacterial regulatory proteins, luxR family ITG12_16935 PF00005 ABC transporter ITG12_16935 PF00664 ABC transporter transmembrane region ITG12_16940 PF00529 HlyD membrane-fusion protein of T1SS ITG12_16945 PF12464 Maltose acetyltransferase ITG12_16945 PF14602 Hexapeptide repeat of succinyl-transferase ITG12_16950 PF00072 Response regulator receiver domain ITG12_16950 PF01966 HD domain ITG12_16955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_16955 PF00512 His Kinase A (phospho-acceptor) domain ITG12_16960 PF12849 PBP superfamily domain ITG12_16965 PF00528 Binding-protein-dependent transport system inner membrane component ITG12_16970 PF00528 Binding-protein-dependent transport system inner membrane component ITG12_16975 PF00005 ABC transporter ITG12_16995 PF00691 OmpA family ITG12_16995 PF01389 OmpA-like transmembrane domain ITG12_17015 PF00691 OmpA family ITG12_17025 PF02378 Phosphotransferase system, EIIC ITG12_17030 PF02378 Phosphotransferase system, EIIC ITG12_17035 PF00127 Copper binding proteins, plastocyanin/azurin family ITG12_17085 PF00732 GMC oxidoreductase ITG12_17085 PF05199 GMC oxidoreductase ITG12_17090 PF07992 Pyridine nucleotide-disulphide oxidoreductase ITG12_17095 PF00375 Sodium:dicarboxylate symporter family ITG12_17105 PF13419 Haloacid dehalogenase-like hydrolase ITG12_17110 PF01590 GAF domain ITG12_17110 PF00158 Sigma-54 interaction domain ITG12_17115 PF00753 Metallo-beta-lactamase superfamily ITG12_17115 PF00258 Flavodoxin ITG12_17115 PF00301 Rubredoxin ITG12_17120 PF07992 Pyridine nucleotide-disulphide oxidoreductase ITG12_17120 PF18113 Rubredoxin binding C-terminal domain ITG12_17130 PF11742 Protein of unknown function (DUF3302) ITG12_17135 PF00529 HlyD membrane-fusion protein of T1SS ITG12_17135 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ITG12_17140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_17140 PF03466 LysR substrate binding domain ITG12_17150 PF00892 EamA-like transporter family ITG12_17160 PF01238 Phosphomannose isomerase type I ITG12_17165 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ITG12_17165 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ITG12_17170 PF12833 Helix-turn-helix domain ITG12_17180 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ITG12_17190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_17190 PF03466 LysR substrate binding domain ITG12_17200 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ITG12_17200 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ITG12_17205 PF06628 Catalase-related immune-responsive ITG12_17205 PF00199 Catalase ITG12_17215 PF16884 N-terminal domain of oxidoreductase ITG12_17215 PF00107 Zinc-binding dehydrogenase ITG12_17220 PF16925 Tetracyclin repressor-like, C-terminal domain ITG12_17220 PF00440 Bacterial regulatory proteins, tetR family ITG12_17225 PF04266 ASCH domain ITG12_17230 PF00144 Beta-lactamase ITG12_17260 PF00534 Glycosyl transferases group 1 ITG12_17260 PF13439 Glycosyltransferase Family 4 ITG12_17270 PF13614 AAA domain ITG12_17270 PF02706 Chain length determinant protein ITG12_17270 PF13807 G-rich domain on putative tyrosine kinase ITG12_17285 PF02397 Bacterial sugar transferase ITG12_17290 PF08402 TOBE domain ITG12_17290 PF00005 ABC transporter ITG12_17295 PF01547 Bacterial extracellular solute-binding protein ITG12_17300 PF00528 Binding-protein-dependent transport system inner membrane component ITG12_17300 PF14785 Maltose transport system permease protein MalF P2 domain ITG12_17305 PF00528 Binding-protein-dependent transport system inner membrane component ITG12_17335 PF05661 Protein of unknown function (DUF808) ITG12_17340 PF01979 Amidohydrolase family ITG12_17345 PF01679 Proteolipid membrane potential modulator ITG12_17350 PF03476 MOSC N-terminal beta barrel domain ITG12_17350 PF03473 MOSC domain ITG12_17350 PF00111 2Fe-2S iron-sulfur cluster binding domain ITG12_17350 PF03476 MOSC N-terminal beta barrel domain ITG12_17350 PF00111 2Fe-2S iron-sulfur cluster binding domain ITG12_17350 PF03473 MOSC domain ITG12_17355 PF02540 NAD synthase ITG12_17360 PF01467 Cytidylyltransferase-like ITG12_17400 PF00005 ABC transporter ITG12_17405 PF01032 FecCD transport family ITG12_17415 PF02472 Biopolymer transport protein ExbD/TolR ITG12_17420 PF01618 MotA/TolQ/ExbB proton channel family ITG12_17425 PF03544 Gram-negative bacterial TonB protein C-terminal ITG12_17430 PF04055 Radical SAM superfamily ITG12_17435 PF06228 Haem utilisation ChuX/HutX ITG12_17440 PF01243 Pyridoxamine 5'-phosphate oxidase ITG12_17455 PF00072 Response regulator receiver domain ITG12_17455 PF01584 CheW-like domain ITG12_17465 PF00128 Alpha amylase, catalytic domain ITG12_17470 PF16197 Ketoacyl-synthetase C-terminal extension ITG12_17470 PF08240 Alcohol dehydrogenase GroES-like domain ITG12_17470 PF00550 Phosphopantetheine attachment site ITG12_17470 PF00698 Acyl transferase domain ITG12_17470 PF00109 Beta-ketoacyl synthase, N-terminal domain ITG12_17470 PF08659 KR domain ITG12_17470 PF02801 Beta-ketoacyl synthase, C-terminal domain ITG12_17470 PF14765 Polyketide synthase dehydratase ITG12_17480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_17480 PF03466 LysR substrate binding domain ITG12_17510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_17510 PF03466 LysR substrate binding domain ITG12_17520 PF02254 TrkA-N domain ITG12_17520 PF00999 Sodium/hydrogen exchanger family ITG12_17525 PF02525 Flavodoxin-like fold ITG12_17530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_17530 PF03466 LysR substrate binding domain ITG12_17565 PF00857 Isochorismatase family ITG12_17570 PF02311 AraC-like ligand binding domain ITG12_17570 PF12833 Helix-turn-helix domain ITG12_17575 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ITG12_17580 PF00884 Sulfatase ITG12_17580 PF08019 Phosphoethanolamine transferase EptA/EptB ITG12_17585 PF01219 Prokaryotic diacylglycerol kinase ITG12_17595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_17595 PF00672 HAMP domain ITG12_17595 PF00512 His Kinase A (phospho-acceptor) domain ITG12_17600 PF00486 Transcriptional regulatory protein, C terminal ITG12_17600 PF00072 Response regulator receiver domain ITG12_17620 PF02028 BCCT, betaine/carnitine/choline family transporter ITG12_17625 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ITG12_17625 PF13378 Enolase C-terminal domain-like ITG12_17630 PF00890 FAD binding domain ITG12_17630 PF04205 FMN-binding domain ITG12_17635 PF07729 FCD domain ITG12_17635 PF00392 Bacterial regulatory proteins, gntR family ITG12_17640 PF00106 short chain dehydrogenase ITG12_17655 PF01323 DSBA-like thioredoxin domain ITG12_17670 PF00255 Glutathione peroxidase ITG12_17675 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ITG12_17685 PF07690 Major Facilitator Superfamily ITG12_17700 PF01966 HD domain ITG12_17715 PF07969 Amidohydrolase family ITG12_17720 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ITG12_17725 PF01769 Divalent cation transporter ITG12_17725 PF00571 CBS domain ITG12_17725 PF03448 MgtE intracellular N domain ITG12_17730 PF03109 ABC1 family ITG12_17735 PF00529 HlyD membrane-fusion protein of T1SS ITG12_17735 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ITG12_17745 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ITG12_17745 PF12833 Helix-turn-helix domain ITG12_17760 PF00072 Response regulator receiver domain ITG12_17760 PF00486 Transcriptional regulatory protein, C terminal ITG12_17765 PF00672 HAMP domain ITG12_17765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_17765 PF00512 His Kinase A (phospho-acceptor) domain ITG12_17765 PF16527 Two-component sensor protein CpxA, periplasmic domain ITG12_17775 PF00155 Aminotransferase class I and II ITG12_17775 PF00392 Bacterial regulatory proteins, gntR family ITG12_17780 PF13520 Amino acid permease ITG12_17785 PF13404 AsnC-type helix-turn-helix domain ITG12_17785 PF01037 Lrp/AsnC ligand binding domain ITG12_17795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_17795 PF03466 LysR substrate binding domain ITG12_17810 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ITG12_17810 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ITG12_17815 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ITG12_17815 PF00072 Response regulator receiver domain ITG12_17815 PF01627 Hpt domain ITG12_17815 PF00672 HAMP domain ITG12_17815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_17815 PF00512 His Kinase A (phospho-acceptor) domain ITG12_17820 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ITG12_17825 PF01554 MatE ITG12_17830 PF04363 Protein of unknown function (DUF496) ITG12_17840 PF04337 Protein of unknown function, DUF480 ITG12_17845 PF01541 GIY-YIG catalytic domain ITG12_17850 PF13407 Periplasmic binding protein domain ITG12_17855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_17855 PF00512 His Kinase A (phospho-acceptor) domain ITG12_17855 PF09308 LuxQ, periplasmic ITG12_17855 PF00072 Response regulator receiver domain ITG12_17870 PF01037 Lrp/AsnC ligand binding domain ITG12_17895 PF07549 SecD/SecF GG Motif ITG12_17895 PF13721 SecD export protein N-terminal TM region ITG12_17895 PF02355 Protein export membrane protein ITG12_17900 PF02355 Protein export membrane protein ITG12_17900 PF07549 SecD/SecF GG Motif ITG12_17910 PF01810 LysE type translocator ITG12_17915 PF00106 short chain dehydrogenase ITG12_17920 PF02803 Thiolase, C-terminal domain ITG12_17920 PF00108 Thiolase, N-terminal domain ITG12_17930 PF00561 alpha/beta hydrolase fold ITG12_17930 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus ITG12_17940 PF03264 NapC/NirT cytochrome c family, N-terminal region ITG12_17945 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) ITG12_17950 PF00384 Molybdopterin oxidoreductase ITG12_17950 PF01568 Molydopterin dinucleotide binding domain ITG12_17950 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ITG12_17960 PF12838 4Fe-4S dicluster domain ITG12_17960 PF13187 4Fe-4S dicluster domain ITG12_17965 PF00672 HAMP domain ITG12_17965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_17965 PF07730 Histidine kinase ITG12_17965 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term ITG12_17970 PF00196 Bacterial regulatory proteins, luxR family ITG12_17970 PF00072 Response regulator receiver domain ITG12_17985 PF07687 Peptidase dimerisation domain ITG12_17985 PF01546 Peptidase family M20/M25/M40 ITG12_17990 PF02371 Transposase IS116/IS110/IS902 family ITG12_17990 PF01548 Transposase ITG12_17995 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ITG12_18000 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ITG12_18005 PF00873 AcrB/AcrD/AcrF family ITG12_18010 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG12_18010 PF00672 HAMP domain ITG12_18010 PF12729 Four helix bundle sensory module for signal transduction ITG12_18015 PF00472 RF-1 domain ITG12_18020 PF13419 Haloacid dehalogenase-like hydrolase ITG12_18025 PF00196 Bacterial regulatory proteins, luxR family ITG12_18025 PF00072 Response regulator receiver domain ITG12_18050 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase ITG12_18050 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ITG12_18080 PF00313 'Cold-shock' DNA-binding domain ITG12_18085 PF03889 Alternative ribosome-rescue factor A ITG12_18095 PF00990 Diguanylate cyclase, GGDEF domain ITG12_18095 PF08448 PAS fold ITG12_18110 PF00005 ABC transporter ITG12_18110 PF12704 MacB-like periplasmic core domain ITG12_18110 PF02687 FtsX-like permease family ITG12_18115 PF12704 MacB-like periplasmic core domain ITG12_18115 PF00005 ABC transporter ITG12_18115 PF02687 FtsX-like permease family ITG12_18125 PF04539 Sigma-70 region 3 ITG12_18125 PF04545 Sigma-70, region 4 ITG12_18125 PF00140 Sigma-70 factor, region 1.2 ITG12_18125 PF04542 Sigma-70 region 2 ITG12_18135 PF00005 ABC transporter ITG12_18140 PF00664 ABC transporter transmembrane region ITG12_18140 PF00005 ABC transporter ITG12_18145 PF02321 Outer membrane efflux protein ITG12_18150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_18150 PF00072 Response regulator receiver domain ITG12_18155 PF13533 Biotin-lipoyl like ITG12_18175 PF00672 HAMP domain ITG12_18175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG12_18175 PF12729 Four helix bundle sensory module for signal transduction ITG12_18185 PF00210 Ferritin-like domain ITG12_18195 PF02016 LD-carboxypeptidase N-terminal domain ITG12_18195 PF17676 LD-carboxypeptidase C-terminal domain ITG12_18200 PF07995 Glucose / Sorbosone dehydrogenase ITG12_18205 PF00465 Iron-containing alcohol dehydrogenase ITG12_18220 PF00892 EamA-like transporter family ITG12_18230 PF03466 LysR substrate binding domain ITG12_18230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_18240 PF13193 AMP-binding enzyme C-terminal domain ITG12_18240 PF00501 AMP-binding enzyme ITG12_18245 PF00351 Biopterin-dependent aromatic amino acid hydroxylase ITG12_18250 PF01329 Pterin 4 alpha carbinolamine dehydratase ITG12_18275 PF12843 Putative quorum-sensing-regulated virulence factor ITG12_18300 PF01470 Pyroglutamyl peptidase ITG12_18310 PF07683 Cobalamin synthesis protein cobW C-terminal domain ITG12_18310 PF02492 CobW/HypB/UreG, nucleotide-binding domain ITG12_18315 PF00990 Diguanylate cyclase, GGDEF domain ITG12_18315 PF00563 EAL domain ITG12_18315 PF03707 Bacterial signalling protein N terminal repeat ITG12_18330 PF00270 DEAD/DEAH box helicase ITG12_18330 PF00271 Helicase conserved C-terminal domain ITG12_18350 PF13188 PAS domain ITG12_18350 PF03707 Bacterial signalling protein N terminal repeat ITG12_18350 PF00563 EAL domain ITG12_18350 PF00990 Diguanylate cyclase, GGDEF domain ITG12_18355 PF00005 ABC transporter ITG12_18365 PF01575 MaoC like domain ITG12_18370 PF12849 PBP superfamily domain ITG12_18380 PF12833 Helix-turn-helix domain ITG12_18385 PF00773 RNB domain ITG12_18385 PF08206 Ribonuclease B OB domain ITG12_18385 PF00575 S1 RNA binding domain ITG12_18390 PF03880 DbpA RNA binding domain ITG12_18390 PF00270 DEAD/DEAH box helicase ITG12_18390 PF00271 Helicase conserved C-terminal domain ITG12_18395 PF00871 Acetokinase family ITG12_18400 PF00034 Cytochrome c ITG12_18400 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ITG12_18410 PF00115 Cytochrome C and Quinol oxidase polypeptide I ITG12_18415 PF00034 Cytochrome c ITG12_18435 PF00682 HMGL-like ITG12_18440 PF00378 Enoyl-CoA hydratase/isomerase ITG12_18445 PF01039 Carboxyl transferase domain ITG12_18450 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ITG12_18450 PF02770 Acyl-CoA dehydrogenase, middle domain ITG12_18450 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ITG12_18455 PF00376 MerR family regulatory protein ITG12_18455 PF09278 MerR, DNA binding ITG12_18460 PF02803 Thiolase, C-terminal domain ITG12_18460 PF00108 Thiolase, N-terminal domain ITG12_18465 PF00171 Aldehyde dehydrogenase family ITG12_18470 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ITG12_18470 PF02770 Acyl-CoA dehydrogenase, middle domain ITG12_18470 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ITG12_18475 PF00378 Enoyl-CoA hydratase/isomerase ITG12_18480 PF00378 Enoyl-CoA hydratase/isomerase ITG12_18485 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ITG12_18485 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ITG12_18500 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ITG12_18500 PF06481 COX Aromatic Rich Motif ITG12_18505 PF00115 Cytochrome C and Quinol oxidase polypeptide I ITG12_18510 PF00510 Cytochrome c oxidase subunit III ITG12_18515 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ITG12_18520 PF01040 UbiA prenyltransferase family ITG12_18535 PF07992 Pyridine nucleotide-disulphide oxidoreductase ITG12_18535 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ITG12_18540 PF03466 LysR substrate binding domain ITG12_18540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_18560 PF02028 BCCT, betaine/carnitine/choline family transporter ITG12_18575 PF03413 Peptidase propeptide and YPEB domain ITG12_18575 PF01447 Thermolysin metallopeptidase, catalytic domain ITG12_18575 PF07504 Fungalysin/Thermolysin Propeptide Motif ITG12_18575 PF02868 Thermolysin metallopeptidase, alpha-helical domain ITG12_18575 PF04151 Bacterial pre-peptidase C-terminal domain ITG12_18580 PF04389 Peptidase family M28 ITG12_18580 PF04151 Bacterial pre-peptidase C-terminal domain ITG12_18600 PF00005 ABC transporter ITG12_18605 PF00497 Bacterial extracellular solute-binding proteins, family 3 ITG12_18610 PF00528 Binding-protein-dependent transport system inner membrane component ITG12_18615 PF00528 Binding-protein-dependent transport system inner membrane component ITG12_18620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_18620 PF03466 LysR substrate binding domain ITG12_18640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_18640 PF03466 LysR substrate binding domain ITG12_18645 PF00884 Sulfatase ITG12_18655 PF01012 Electron transfer flavoprotein domain ITG12_18660 PF01012 Electron transfer flavoprotein domain ITG12_18660 PF00766 Electron transfer flavoprotein FAD-binding domain ITG12_18665 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ITG12_18665 PF00364 Biotin-requiring enzyme ITG12_18665 PF02817 e3 binding domain ITG12_18670 PF02780 Transketolase, C-terminal domain ITG12_18670 PF02779 Transketolase, pyrimidine binding domain ITG12_18675 PF00676 Dehydrogenase E1 component ITG12_18690 PF00012 Hsp70 protein ITG12_18695 PF04314 Copper chaperone PCu(A)C ITG12_18725 PF00486 Transcriptional regulatory protein, C terminal ITG12_18725 PF00072 Response regulator receiver domain ITG12_18740 PF00245 Alkaline phosphatase ITG12_18750 PF01483 Proprotein convertase P-domain ITG12_18750 PF00082 Subtilase family ITG12_18760 PF00990 Diguanylate cyclase, GGDEF domain ITG12_18765 PF03222 Tryptophan/tyrosine permease family ITG12_18770 PF00563 EAL domain ITG12_18770 PF00990 Diguanylate cyclase, GGDEF domain ITG12_18770 PF08448 PAS fold ITG12_18780 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ITG12_18780 PF00384 Molybdopterin oxidoreductase ITG12_18780 PF01568 Molydopterin dinucleotide binding domain ITG12_18790 PF00591 Glycosyl transferase family, a/b domain ITG12_18790 PF02885 Glycosyl transferase family, helical bundle domain ITG12_18795 PF01738 Dienelactone hydrolase family ITG12_18800 PF08376 Nitrate and nitrite sensing ITG12_18800 PF03861 ANTAR domain ITG12_18805 PF00005 ABC transporter ITG12_18810 PF00528 Binding-protein-dependent transport system inner membrane component ITG12_18815 PF00005 ABC transporter ITG12_18820 PF07992 Pyridine nucleotide-disulphide oxidoreductase ITG12_18820 PF18267 Rubredoxin NAD+ reductase C-terminal domain ITG12_18820 PF04324 BFD-like [2Fe-2S] binding domain ITG12_18820 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ITG12_18820 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ITG12_18820 PF13806 Rieske-like [2Fe-2S] domain ITG12_18850 PF00072 Response regulator receiver domain ITG12_18850 PF00211 Adenylate and Guanylate cyclase catalytic domain ITG12_18855 PF07963 Prokaryotic N-terminal methylation motif ITG12_18860 PF03707 Bacterial signalling protein N terminal repeat ITG12_18860 PF00563 EAL domain ITG12_18860 PF00990 Diguanylate cyclase, GGDEF domain ITG12_18865 PF07963 Prokaryotic N-terminal methylation motif ITG12_18870 PF00072 Response regulator receiver domain ITG12_18870 PF00486 Transcriptional regulatory protein, C terminal ITG12_18875 PF00512 His Kinase A (phospho-acceptor) domain ITG12_18875 PF00672 HAMP domain ITG12_18875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_18880 PF00486 Transcriptional regulatory protein, C terminal ITG12_18880 PF00072 Response regulator receiver domain ITG12_18885 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ITG12_18890 PF02322 Cytochrome bd terminal oxidase subunit II ITG12_18895 PF01654 Cytochrome bd terminal oxidase subunit I ITG12_18905 PF03466 LysR substrate binding domain ITG12_18905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_18915 PF01476 LysM domain ITG12_18915 PF08525 Opacity-associated protein A N-terminal motif ITG12_18915 PF01551 Peptidase family M23 ITG12_18950 PF01594 AI-2E family transporter ITG12_18955 PF00990 Diguanylate cyclase, GGDEF domain ITG12_18955 PF00072 Response regulator receiver domain ITG12_18975 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ ITG12_18980 PF02801 Beta-ketoacyl synthase, C-terminal domain ITG12_18980 PF00698 Acyl transferase domain ITG12_18980 PF14765 Polyketide synthase dehydratase ITG12_18980 PF00109 Beta-ketoacyl synthase, N-terminal domain ITG12_18980 PF16197 Ketoacyl-synthetase C-terminal extension ITG12_18980 PF08659 KR domain ITG12_18980 PF08240 Alcohol dehydrogenase GroES-like domain ITG12_18980 PF00550 Phosphopantetheine attachment site ITG12_18985 PF00378 Enoyl-CoA hydratase/isomerase ITG12_19000 PF02492 CobW/HypB/UreG, nucleotide-binding domain ITG12_19000 PF07683 Cobalamin synthesis protein cobW C-terminal domain ITG12_19005 PF02492 CobW/HypB/UreG, nucleotide-binding domain ITG12_19005 PF07683 Cobalamin synthesis protein cobW C-terminal domain ITG12_19010 PF01258 Prokaryotic dksA/traR C4-type zinc finger ITG12_19020 PF02028 BCCT, betaine/carnitine/choline family transporter ITG12_19035 PF12833 Helix-turn-helix domain ITG12_19035 PF07883 Cupin domain ITG12_19050 PF01569 PAP2 superfamily ITG12_19115 PF02583 Metal-sensitive transcriptional repressor ITG12_19130 PF00664 ABC transporter transmembrane region ITG12_19130 PF00005 ABC transporter ITG12_19165 PF01638 HxlR-like helix-turn-helix ITG12_19180 PF00872 Transposase, Mutator family ITG12_19190 PF02347 Glycine cleavage system P-protein ITG12_19195 PF01597 Glycine cleavage H-protein ITG12_19200 PF00464 Serine hydroxymethyltransferase ITG12_19210 PF08669 Glycine cleavage T-protein C-terminal barrel domain ITG12_19210 PF01571 Aminomethyltransferase folate-binding domain ITG12_19220 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ITG12_19225 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ITG12_19230 PF00873 AcrB/AcrD/AcrF family ITG12_19255 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ITG12_19255 PF02378 Phosphotransferase system, EIIC ITG12_19260 PF00294 pfkB family carbohydrate kinase ITG12_19265 PF00381 PTS HPr component phosphorylation site ITG12_19265 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ITG12_19270 PF00356 Bacterial regulatory proteins, lacI family ITG12_19270 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ITG12_19285 PF00563 EAL domain ITG12_19285 PF01590 GAF domain ITG12_19285 PF00990 Diguanylate cyclase, GGDEF domain ITG12_19285 PF00989 PAS fold ITG12_19290 PF00528 Binding-protein-dependent transport system inner membrane component ITG12_19295 PF00497 Bacterial extracellular solute-binding proteins, family 3 ITG12_19300 PF00528 Binding-protein-dependent transport system inner membrane component ITG12_19305 PF00005 ABC transporter ITG12_19315 PF00465 Iron-containing alcohol dehydrogenase ITG12_19320 PF06719 AraC-type transcriptional regulator N-terminus ITG12_19320 PF12833 Helix-turn-helix domain ITG12_19325 PF00704 Glycosyl hydrolases family 18 ITG12_19325 PF06483 Chitinase C ITG12_19330 PF00483 Nucleotidyl transferase ITG12_19335 PF01268 Formate--tetrahydrofolate ligase ITG12_19340 PF00294 pfkB family carbohydrate kinase ITG12_19355 PF11849 Domain of unknown function (DUF3369) ITG12_19360 PF13419 Haloacid dehalogenase-like hydrolase ITG12_19365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG12_19365 PF00672 HAMP domain ITG12_19365 PF12729 Four helix bundle sensory module for signal transduction ITG12_19370 PF04336 Acyl carrier protein phosphodiesterase ITG12_19375 PF00270 DEAD/DEAH box helicase ITG12_19375 PF00271 Helicase conserved C-terminal domain ITG12_19380 PF12792 CSS motif domain associated with EAL ITG12_19380 PF00563 EAL domain ITG12_19395 PF01292 Prokaryotic cytochrome b561 ITG12_19400 PF04264 YceI-like domain ITG12_19405 PF01226 Formate/nitrite transporter ITG12_19410 PF03466 LysR substrate binding domain ITG12_19410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_19415 PF06496 Protein of unknown function (DUF1097) ITG12_19420 PF11398 Protein of unknown function (DUF2813) ITG12_19425 PF02872 5'-nucleotidase, C-terminal domain ITG12_19425 PF00149 Calcineurin-like phosphoesterase ITG12_19430 PF03741 Integral membrane protein TerC family ITG12_19445 PF02219 Methylenetetrahydrofolate reductase ITG12_19445 PF02574 Homocysteine S-methyltransferase ITG12_19460 PF12262 Bacterial virulence factor lipase N-terminal ITG12_19465 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ITG12_19480 PF03061 Thioesterase superfamily ITG12_19490 PF12793 Sugar transport-related sRNA regulator N-term ITG12_19490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ITG12_19515 PF00684 DnaJ central domain ITG12_19515 PF00226 DnaJ domain ITG12_19515 PF01556 DnaJ C terminal domain ITG12_19525 PF00990 Diguanylate cyclase, GGDEF domain ITG12_19525 PF00498 FHA domain ITG12_19525 PF00563 EAL domain ITG12_19530 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase ITG12_19530 PF12241 Trans-2-enoyl-CoA reductase catalytic region ITG12_19530 PF07055 Enoyl reductase FAD binding domain ITG12_19535 PF13472 GDSL-like Lipase/Acylhydrolase family ITG12_19540 PF00005 ABC transporter ITG12_19555 PF02626 Carboxyltransferase domain, subdomain A and B ITG12_19560 PF02682 Carboxyltransferase domain, subdomain C and D ITG12_19565 PF03746 LamB/YcsF family ITG12_19570 PF00563 EAL domain ITG12_19570 PF00990 Diguanylate cyclase, GGDEF domain ITG12_19570 PF05231 MASE1 ITG12_19570 PF08447 PAS fold ITG12_19570 PF08448 PAS fold ITG12_19570 PF13426 PAS domain ITG12_19575 PF16363 GDP-mannose 4,6 dehydratase ITG12_19580 PF07715 TonB-dependent Receptor Plug Domain ITG12_19580 PF04886 PT repeat ITG12_19580 PF00593 TonB dependent receptor ITG12_19585 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_19585 PF03466 LysR substrate binding domain ITG12_19590 PF13607 Succinyl-CoA ligase like flavodoxin domain ITG12_19590 PF13380 CoA binding domain ITG12_19590 PF00583 Acetyltransferase (GNAT) family ITG12_19600 PF07478 D-ala D-ala ligase C-terminus ITG12_19600 PF01820 D-ala D-ala ligase N-terminus ITG12_19610 PF01253 Translation initiation factor SUI1 ITG12_19660 PF05707 Zonular occludens toxin (Zot) ITG12_19710 PF03701 Uncharacterised protein family (UPF0181) ITG12_19725 PF00072 Response regulator receiver domain ITG12_19725 PF00486 Transcriptional regulatory protein, C terminal ITG12_19735 PF02233 NAD(P) transhydrogenase beta subunit ITG12_19740 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ITG12_19740 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ITG12_19740 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch ITG12_19755 PF00990 Diguanylate cyclase, GGDEF domain ITG12_19770 PF00563 EAL domain ITG12_19770 PF00360 Phytochrome region ITG12_19770 PF00990 Diguanylate cyclase, GGDEF domain ITG12_19770 PF01590 GAF domain ITG12_19780 PF03459 TOBE domain ITG12_19780 PF00005 ABC transporter ITG12_19785 PF00528 Binding-protein-dependent transport system inner membrane component ITG12_19795 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ITG12_19795 PF07685 CobB/CobQ-like glutamine amidotransferase domain ITG12_19800 PF04076 Bacterial OB fold (BOF) protein ITG12_19815 PF00155 Aminotransferase class I and II ITG12_19820 PF12852 Cupin ITG12_19820 PF12833 Helix-turn-helix domain ITG12_19825 PF01554 MatE ITG12_19835 PF03477 ATP cone domain ITG12_19835 PF13597 Anaerobic ribonucleoside-triphosphate reductase ITG12_19850 PF04143 Sulphur transport ITG12_19860 PF07992 Pyridine nucleotide-disulphide oxidoreductase ITG12_19860 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ITG12_19890 PF07690 Major Facilitator Superfamily ITG12_19895 PF00072 Response regulator receiver domain ITG12_19895 PF00196 Bacterial regulatory proteins, luxR family ITG12_19900 PF07730 Histidine kinase ITG12_19900 PF05231 MASE1 ITG12_19900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_19905 PF07690 Major Facilitator Superfamily ITG12_19910 PF01238 Phosphomannose isomerase type I ITG12_19920 PF01594 AI-2E family transporter ITG12_19930 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ITG12_19930 PF00529 HlyD membrane-fusion protein of T1SS ITG12_19960 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ITG12_19960 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ITG12_19965 PF00085 Thioredoxin ITG12_19970 PF07690 Major Facilitator Superfamily ITG12_19975 PF07495 Y_Y_Y domain ITG12_19975 PF07494 Two component regulator propeller ITG12_19975 PF12833 Helix-turn-helix domain ITG12_19975 PF00512 His Kinase A (phospho-acceptor) domain ITG12_19975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_19975 PF00072 Response regulator receiver domain ITG12_19980 PF01554 MatE ITG12_19985 PF11756 Nitrous oxide-stimulated promoter ITG12_20000 PF03605 Anaerobic c4-dicarboxylate membrane transporter ITG12_20015 PF10414 Sirohaem synthase dimerisation region ITG12_20015 PF14824 Sirohaem biosynthesis protein central ITG12_20015 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ITG12_20020 PF01226 Formate/nitrite transporter ITG12_20025 PF13806 Rieske-like [2Fe-2S] domain ITG12_20030 PF04324 BFD-like [2Fe-2S] binding domain ITG12_20030 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ITG12_20030 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ITG12_20030 PF07992 Pyridine nucleotide-disulphide oxidoreductase ITG12_20030 PF18267 Rubredoxin NAD+ reductase C-terminal domain ITG12_20035 PF01156 Inosine-uridine preferring nucleoside hydrolase ITG12_20040 PF00990 Diguanylate cyclase, GGDEF domain ITG12_20040 PF17152 Periplasmic sensor domain ITG12_20075 PF00128 Alpha amylase, catalytic domain ITG12_20075 PF09154 Domain of unknown function (DUF1939) ITG12_20090 PF01565 FAD binding domain ITG12_20090 PF09330 D-lactate dehydrogenase, membrane binding ITG12_20095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_20095 PF03466 LysR substrate binding domain ITG12_20100 PF00933 Glycosyl hydrolase family 3 N terminal domain ITG12_20100 PF14310 Fibronectin type III-like domain ITG12_20100 PF01915 Glycosyl hydrolase family 3 C-terminal domain ITG12_20110 PF05762 VWA domain containing CoxE-like protein ITG12_20115 PF17868 AAA lid domain ITG12_20115 PF07728 AAA domain (dynein-related subfamily) ITG12_20115 PF12592 Protein of unknown function (DUF3763) ITG12_20125 PF01212 Beta-eliminating lyase ITG12_20130 PF00034 Cytochrome c ITG12_20135 PF03606 C4-dicarboxylate anaerobic carrier ITG12_20145 PF08212 Lipocalin-like domain ITG12_20175 PF00704 Glycosyl hydrolases family 18 ITG12_20185 PF01548 Transposase ITG12_20185 PF02371 Transposase IS116/IS110/IS902 family ITG12_20190 PF13476 AAA domain ITG12_20195 PF00149 Calcineurin-like phosphoesterase ITG12_20195 PF12320 Type 5 capsule protein repressor C-terminal domain ITG12_20215 PF03527 RHS protein ITG12_20230 PF04717 Type VI secretion system, phage-baseplate injector ITG12_20240 PF00004 ATPase family associated with various cellular activities (AAA) ITG12_20240 PF07724 AAA domain (Cdc48 subfamily) ITG12_20240 PF17871 AAA lid domain ITG12_20240 PF10431 C-terminal, D2-small domain, of ClpB protein ITG12_20250 PF05947 Type VI secretion system, TssF ITG12_20265 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ITG12_20270 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ITG12_20275 PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 ITG12_20295 PF06761 Intracellular multiplication and human macrophage-killing ITG12_20295 PF14331 ImcF-related N-terminal domain ITG12_20295 PF06744 Type VI secretion protein IcmF C-terminal ITG12_20300 PF13677 Membrane MotB of proton-channel complex MotA/MotB ITG12_20300 PF00691 OmpA family ITG12_20305 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE ITG12_20320 PF03793 PASTA domain ITG12_20320 PF00069 Protein kinase domain ITG12_20355 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ITG12_20360 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ITG12_20370 PF00535 Glycosyl transferase family 2 ITG12_20380 PF01757 Acyltransferase family ITG12_20390 PF09722 Protein of unknown function (DUF2384) ITG12_20395 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ITG12_20405 PF00171 Aldehyde dehydrogenase family ITG12_20425 PF00892 EamA-like transporter family ITG12_20430 PF00893 Small Multidrug Resistance protein ITG12_20440 PF01569 PAP2 superfamily ITG12_20455 PF00892 EamA-like transporter family ITG12_20465 PF07963 Prokaryotic N-terminal methylation motif ITG12_20470 PF01584 CheW-like domain ITG12_20470 PF00072 Response regulator receiver domain ITG12_20475 PF00881 Nitroreductase family ITG12_20480 PF00672 HAMP domain ITG12_20480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG12_20485 PF00072 Response regulator receiver domain ITG12_20485 PF00196 Bacterial regulatory proteins, luxR family ITG12_20490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_20490 PF03466 LysR substrate binding domain ITG12_20495 PF00990 Diguanylate cyclase, GGDEF domain ITG12_20500 PF00072 Response regulator receiver domain ITG12_20500 PF00196 Bacterial regulatory proteins, luxR family ITG12_20505 PF13188 PAS domain ITG12_20505 PF03707 Bacterial signalling protein N terminal repeat ITG12_20505 PF00990 Diguanylate cyclase, GGDEF domain ITG12_20505 PF00563 EAL domain ITG12_20510 PF00672 HAMP domain ITG12_20510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_20510 PF00512 His Kinase A (phospho-acceptor) domain ITG12_20510 PF01627 Hpt domain ITG12_20510 PF00072 Response regulator receiver domain ITG12_20510 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) ITG12_20515 PF00990 Diguanylate cyclase, GGDEF domain ITG12_20515 PF00563 EAL domain ITG12_20515 PF03707 Bacterial signalling protein N terminal repeat ITG12_20525 PF07715 TonB-dependent Receptor Plug Domain ITG12_20525 PF00593 TonB dependent receptor ITG12_20560 PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE ITG12_20590 PF01037 Lrp/AsnC ligand binding domain ITG12_20600 PF05947 Type VI secretion system, TssF ITG12_20610 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath ITG12_20625 PF00069 Protein kinase domain ITG12_20650 PF04717 Type VI secretion system, phage-baseplate injector ITG12_20655 PF05638 Type VI secretion system effector, Hcp ITG12_20660 PF07724 AAA domain (Cdc48 subfamily) ITG12_20660 PF17871 AAA lid domain ITG12_20660 PF10431 C-terminal, D2-small domain, of ClpB protein ITG12_20660 PF00004 ATPase family associated with various cellular activities (AAA) ITG12_20665 PF02954 Bacterial regulatory protein, Fis family ITG12_20665 PF00158 Sigma-54 interaction domain ITG12_20690 PF01551 Peptidase family M23 ITG12_20690 PF08525 Opacity-associated protein A N-terminal motif ITG12_20690 PF01476 LysM domain ITG12_20695 PF01926 50S ribosome-binding GTPase ITG12_20700 PF00155 Aminotransferase class I and II ITG12_20705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_20705 PF00072 Response regulator receiver domain ITG12_20725 PF03606 C4-dicarboxylate anaerobic carrier ITG12_20730 PF04011 LemA family ITG12_20735 PF01435 Peptidase family M48 ITG12_20750 PF08774 VRR-NUC domain ITG12_20750 PF18081 Fanconi anemia-associated nuclease SAP domain ITG12_20760 PF04055 Radical SAM superfamily ITG12_20760 PF13186 Iron-sulfur cluster-binding domain ITG12_20765 PF03781 Sulfatase-modifying factor enzyme 1 ITG12_20780 PF04076 Bacterial OB fold (BOF) protein ITG12_20785 PF00781 Diacylglycerol kinase catalytic domain ITG12_20790 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_20790 PF03466 LysR substrate binding domain ITG12_20795 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ITG12_20795 PF01872 RibD C-terminal domain ITG12_20800 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ITG12_20800 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain ITG12_20805 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ITG12_20805 PF02874 ATP synthase alpha/beta family, beta-barrel domain ITG12_20810 PF00231 ATP synthase ITG12_20815 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ITG12_20815 PF00306 ATP synthase alpha/beta chain, C terminal domain ITG12_20815 PF02874 ATP synthase alpha/beta family, beta-barrel domain ITG12_20820 PF00213 ATP synthase delta (OSCP) subunit ITG12_20825 PF00430 ATP synthase B/B' CF(0) ITG12_20830 PF00137 ATP synthase subunit C ITG12_20835 PF00119 ATP synthase A chain ITG12_20855 PF00092 von Willebrand factor type A domain ITG12_20870 PF17863 AAA lid domain ITG12_20870 PF07726 ATPase family associated with various cellular activities (AAA) ITG12_20875 PF13186 Iron-sulfur cluster-binding domain ITG12_20875 PF04055 Radical SAM superfamily ITG12_20880 PF00884 Sulfatase ITG12_20885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_20885 PF03466 LysR substrate binding domain ITG12_20895 PF00884 Sulfatase ITG12_20900 PF00884 Sulfatase ITG12_20905 PF00486 Transcriptional regulatory protein, C terminal ITG12_20905 PF00072 Response regulator receiver domain ITG12_20910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_20910 PF00512 His Kinase A (phospho-acceptor) domain ITG12_20910 PF00672 HAMP domain ITG12_20910 PF16750 Sensor domain of 2-component histidine kinase ITG12_20930 PF00672 HAMP domain ITG12_20930 PF01627 Hpt domain ITG12_20930 PF00072 Response regulator receiver domain ITG12_20930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_20930 PF00512 His Kinase A (phospho-acceptor) domain ITG12_20935 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ITG12_20940 PF02142 MGS-like domain ITG12_20945 PF13361 UvrD-like helicase C-terminal domain ITG12_20945 PF00580 UvrD/REP helicase N-terminal domain ITG12_20945 PF12462 DNA helicase IV / RNA helicase N terminal ITG12_20950 PF12805 FUSC-like inner membrane protein yccS ITG12_20985 PF07715 TonB-dependent Receptor Plug Domain ITG12_20985 PF00593 TonB dependent receptor ITG12_20990 PF12833 Helix-turn-helix domain ITG12_20990 PF02311 AraC-like ligand binding domain ITG12_20995 PF13411 MerR HTH family regulatory protein ITG12_21000 PF00005 ABC transporter ITG12_21005 PF01032 FecCD transport family ITG12_21010 PF01032 FecCD transport family ITG12_21015 PF01497 Periplasmic binding protein ITG12_21030 PF01048 Phosphorylase superfamily ITG12_21035 PF04973 Nicotinamide mononucleotide transporter ITG12_21045 PF00356 Bacterial regulatory proteins, lacI family ITG12_21050 PF00294 pfkB family carbohydrate kinase ITG12_21055 PF13407 Periplasmic binding protein domain ITG12_21060 PF02653 Branched-chain amino acid transport system / permease component ITG12_21065 PF00005 ABC transporter ITG12_21070 PF05025 RbsD / FucU transport protein family ITG12_21075 PF00990 Diguanylate cyclase, GGDEF domain ITG12_21075 PF00563 EAL domain ITG12_21080 PF01048 Phosphorylase superfamily ITG12_21085 PF01177 Asp/Glu/Hydantoin racemase ITG12_21090 PF00293 NUDIX domain ITG12_21095 PF00293 NUDIX domain ITG12_21140 PF04116 Fatty acid hydroxylase superfamily ITG12_21155 PF00512 His Kinase A (phospho-acceptor) domain ITG12_21155 PF00072 Response regulator receiver domain ITG12_21155 PF09308 LuxQ, periplasmic ITG12_21155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_21160 PF03150 Di-haem cytochrome c peroxidase ITG12_21160 PF00034 Cytochrome c ITG12_21165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_21165 PF00512 His Kinase A (phospho-acceptor) domain ITG12_21165 PF09456 RcsC Alpha-Beta-Loop (ABL) ITG12_21165 PF00072 Response regulator receiver domain ITG12_21170 PF00360 Phytochrome region ITG12_21170 PF00563 EAL domain ITG12_21170 PF01590 GAF domain ITG12_21170 PF00990 Diguanylate cyclase, GGDEF domain ITG12_21190 PF16200 C-terminal region of band_7 ITG12_21190 PF01145 SPFH domain / Band 7 family ITG12_21200 PF00881 Nitroreductase family ITG12_21205 PF00571 CBS domain ITG12_21205 PF00005 ABC transporter ITG12_21210 PF00528 Binding-protein-dependent transport system inner membrane component ITG12_21215 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ITG12_21220 PF00732 GMC oxidoreductase ITG12_21220 PF05199 GMC oxidoreductase ITG12_21225 PF00171 Aldehyde dehydrogenase family ITG12_21230 PF00440 Bacterial regulatory proteins, tetR family ITG12_21230 PF13977 BetI-type transcriptional repressor, C-terminal ITG12_21235 PF00990 Diguanylate cyclase, GGDEF domain ITG12_21235 PF07694 5TMR of 5TMR-LYT ITG12_21250 PF01979 Amidohydrolase family ITG12_21275 PF00691 OmpA family ITG12_21275 PF13488 Glycine zipper ITG12_21310 PF00437 Type II/IV secretion system protein ITG12_21315 PF10609 NUBPL iron-transfer P-loop NTPase ITG12_21325 PF13629 Pilus formation protein N terminal region ITG12_21325 PF00263 Bacterial type II and III secretion system protein ITG12_21325 PF04972 BON domain ITG12_21345 PF03466 LysR substrate binding domain ITG12_21345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_21350 PF12146 Serine aminopeptidase, S33 ITG12_21365 PF00478 IMP dehydrogenase / GMP reductase domain ITG12_21370 PF01256 Carbohydrate kinase ITG12_21370 PF03853 YjeF-related protein N-terminus ITG12_21380 PF00072 Response regulator receiver domain ITG12_21385 PF00248 Aldo/keto reductase family ITG12_21400 PF00654 Voltage gated chloride channel ITG12_21410 PF01566 Natural resistance-associated macrophage protein ITG12_21415 PF01227 GTP cyclohydrolase I ITG12_21420 PF00994 Probable molybdopterin binding domain ITG12_21420 PF03454 MoeA C-terminal region (domain IV) ITG12_21420 PF03453 MoeA N-terminal region (domain I and II) ITG12_21425 PF00899 ThiF family ITG12_21430 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ITG12_21435 PF00175 Oxidoreductase NAD-binding domain ITG12_21440 PF04443 Acyl-protein synthetase, LuxE ITG12_21445 PF00296 Luciferase-like monooxygenase ITG12_21450 PF00296 Luciferase-like monooxygenase ITG12_21455 PF02273 Acyl transferase ITG12_21460 PF13737 Transposase DDE domain ITG12_21465 PF05893 Acyl-CoA reductase (LuxC) ITG12_21485 PF00581 Rhodanese-like domain ITG12_21490 PF03707 Bacterial signalling protein N terminal repeat ITG12_21490 PF00990 Diguanylate cyclase, GGDEF domain ITG12_21490 PF00563 EAL domain ITG12_21495 PF00704 Glycosyl hydrolases family 18 ITG12_21495 PF08329 Chitinase A, N-terminal domain ITG12_21505 PF00923 Transaldolase/Fructose-6-phosphate aldolase ITG12_21510 PF02780 Transketolase, C-terminal domain ITG12_21510 PF00456 Transketolase, thiamine diphosphate binding domain ITG12_21510 PF02779 Transketolase, pyrimidine binding domain ITG12_21515 PF12729 Four helix bundle sensory module for signal transduction ITG12_21515 PF00672 HAMP domain ITG12_21515 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG12_21520 PF07690 Major Facilitator Superfamily ITG12_21525 PF00793 DAHP synthetase I family ITG12_21530 PF01389 OmpA-like transmembrane domain ITG12_21530 PF00691 OmpA family ITG12_21535 PF01040 UbiA prenyltransferase family ITG12_21540 PF02628 Cytochrome oxidase assembly protein ITG12_21560 PF00510 Cytochrome c oxidase subunit III ITG12_21565 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 ITG12_21570 PF00115 Cytochrome C and Quinol oxidase polypeptide I ITG12_21575 PF02790 Cytochrome C oxidase subunit II, transmembrane domain ITG12_21575 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ITG12_21580 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ITG12_21580 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ITG12_21580 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ITG12_21580 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ITG12_21590 PF01810 LysE type translocator ITG12_21610 PF01557 Fumarylacetoacetate (FAA) hydrolase family ITG12_21625 PF00892 EamA-like transporter family ITG12_21630 PF00462 Glutaredoxin ITG12_21640 PF07690 Major Facilitator Superfamily ITG12_21645 PF03466 LysR substrate binding domain ITG12_21645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_21650 PF01032 FecCD transport family ITG12_21660 PF07715 TonB-dependent Receptor Plug Domain ITG12_21660 PF00593 TonB dependent receptor ITG12_21665 PF12833 Helix-turn-helix domain ITG12_21675 PF00005 ABC transporter ITG12_21680 PF00563 EAL domain ITG12_21680 PF00990 Diguanylate cyclase, GGDEF domain ITG12_21680 PF08448 PAS fold ITG12_21680 PF08447 PAS fold ITG12_21685 PF08525 Opacity-associated protein A N-terminal motif ITG12_21685 PF01551 Peptidase family M23 ITG12_21685 PF01476 LysM domain ITG12_21705 PF07670 Nucleoside recognition ITG12_21710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG12_21710 PF00672 HAMP domain ITG12_21710 PF02743 Cache domain ITG12_21720 PF03222 Tryptophan/tyrosine permease family ITG12_21755 PF00107 Zinc-binding dehydrogenase ITG12_21755 PF08240 Alcohol dehydrogenase GroES-like domain ITG12_21760 PF02378 Phosphotransferase system, EIIC ITG12_21760 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ITG12_21765 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ITG12_21770 PF07702 UTRA domain ITG12_21770 PF00392 Bacterial regulatory proteins, gntR family ITG12_21775 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ITG12_21775 PF02378 Phosphotransferase system, EIIC ITG12_21775 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ITG12_21780 PF01074 Glycosyl hydrolases family 38 N-terminal domain ITG12_21780 PF09261 Alpha mannosidase middle domain ITG12_21780 PF07748 Glycosyl hydrolases family 38 C-terminal domain ITG12_21785 PF01238 Phosphomannose isomerase type I ITG12_21790 PF03928 Haem-degrading ITG12_21795 PF00248 Aldo/keto reductase family ITG12_21800 PF03466 LysR substrate binding domain ITG12_21800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_21815 PF01758 Sodium Bile acid symporter family ITG12_21830 PF01161 Phosphatidylethanolamine-binding protein ITG12_21835 PF02567 Phenazine biosynthesis-like protein ITG12_21840 PF01042 Endoribonuclease L-PSP ITG12_21845 PF10282 Lactonase, 7-bladed beta-propeller ITG12_21850 PF00728 Glycosyl hydrolase family 20, catalytic domain ITG12_21850 PF02838 Glycosyl hydrolase family 20, domain 2 ITG12_21855 PF01081 KDPG and KHG aldolase ITG12_21860 PF00294 pfkB family carbohydrate kinase ITG12_21865 PF00474 Sodium:solute symporter family ITG12_21875 PF07969 Amidohydrolase family ITG12_21885 PF02685 Glucokinase ITG12_21885 PF01418 Helix-turn-helix domain, rpiR family ITG12_21885 PF01380 SIS domain ITG12_21890 PF00672 HAMP domain ITG12_21890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG12_21890 PF17200 Single Cache domain 2 ITG12_21900 PF00005 ABC transporter ITG12_21915 PF01979 Amidohydrolase family ITG12_21925 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ITG12_21925 PF01568 Molydopterin dinucleotide binding domain ITG12_21925 PF00384 Molybdopterin oxidoreductase ITG12_21925 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ITG12_21925 PF12838 4Fe-4S dicluster domain ITG12_21940 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ITG12_21945 PF00873 AcrB/AcrD/AcrF family ITG12_21985 PF08659 KR domain ITG12_21985 PF00550 Phosphopantetheine attachment site ITG12_21985 PF00109 Beta-ketoacyl synthase, N-terminal domain ITG12_21985 PF02801 Beta-ketoacyl synthase, C-terminal domain ITG12_21985 PF16197 Ketoacyl-synthetase C-terminal extension ITG12_21985 PF08240 Alcohol dehydrogenase GroES-like domain ITG12_21985 PF00698 Acyl transferase domain ITG12_21985 PF14765 Polyketide synthase dehydratase ITG12_21990 PF01548 Transposase ITG12_21990 PF02371 Transposase IS116/IS110/IS902 family ITG12_22005 PF00293 NUDIX domain ITG12_22020 PF03150 Di-haem cytochrome c peroxidase ITG12_22020 PF00034 Cytochrome c ITG12_22020 PF14376 Haem-binding domain ITG12_22030 PF13302 Acetyltransferase (GNAT) domain ITG12_22040 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) ITG12_22050 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ITG12_22050 PF00326 Prolyl oligopeptidase family ITG12_22055 PF16326 ABC transporter C-terminal domain ITG12_22055 PF12848 ABC transporter ITG12_22055 PF00005 ABC transporter ITG12_22060 PF01980 tRNA-methyltransferase O ITG12_22080 PF00582 Universal stress protein family ITG12_22090 PF00872 Transposase, Mutator family ITG12_22095 PF08220 DeoR-like helix-turn-helix domain ITG12_22095 PF00455 DeoR C terminal sensor domain ITG12_22100 PF03009 Glycerophosphoryl diester phosphodiesterase family ITG12_22105 PF13416 Bacterial extracellular solute-binding protein ITG12_22110 PF00528 Binding-protein-dependent transport system inner membrane component ITG12_22115 PF00528 Binding-protein-dependent transport system inner membrane component ITG12_22120 PF17912 MalK OB fold domain ITG12_22120 PF00005 ABC transporter ITG12_22140 PF01047 MarR family ITG12_22150 PF02492 CobW/HypB/UreG, nucleotide-binding domain ITG12_22150 PF07683 Cobalamin synthesis protein cobW C-terminal domain ITG12_22155 PF00101 Ribulose bisphosphate carboxylase, small chain ITG12_22155 PF00132 Bacterial transferase hexapeptide (six repeats) ITG12_22160 PF01979 Amidohydrolase family ITG12_22170 PF01734 Patatin-like phospholipase ITG12_22175 PF02678 Pirin ITG12_22175 PF05726 Pirin C-terminal cupin domain ITG12_22180 PF00313 'Cold-shock' DNA-binding domain ITG12_22190 PF00962 Adenosine/AMP deaminase ITG12_22195 PF17151 Periplasmic sensor domain ITG12_22195 PF00990 Diguanylate cyclase, GGDEF domain ITG12_22200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_22200 PF03466 LysR substrate binding domain ITG12_22215 PF00462 Glutaredoxin ITG12_22215 PF08534 Redoxin ITG12_22220 PF08241 Methyltransferase domain ITG12_22230 PF00768 D-alanyl-D-alanine carboxypeptidase ITG12_22230 PF07943 Penicillin-binding protein 5, C-terminal domain ITG12_22235 PF02028 BCCT, betaine/carnitine/choline family transporter ITG12_22240 PF02798 Glutathione S-transferase, N-terminal domain ITG12_22250 PF01872 RibD C-terminal domain ITG12_22275 PF00313 'Cold-shock' DNA-binding domain ITG12_22295 PF02463 RecF/RecN/SMC N terminal domain ITG12_22355 PF03466 LysR substrate binding domain ITG12_22355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_22360 PF12833 Helix-turn-helix domain ITG12_22360 PF01497 Periplasmic binding protein ITG12_22365 PF00155 Aminotransferase class I and II ITG12_22415 PF00270 DEAD/DEAH box helicase ITG12_22415 PF00271 Helicase conserved C-terminal domain ITG12_22435 PF04717 Type VI secretion system, phage-baseplate injector ITG12_22445 PF03466 LysR substrate binding domain ITG12_22445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_22455 PF03466 LysR substrate binding domain ITG12_22455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_22470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_22470 PF03466 LysR substrate binding domain ITG12_22480 PF07690 Major Facilitator Superfamily ITG12_22490 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ITG12_22500 PF05816 Toxic anion resistance protein (TelA) ITG12_22510 PF05496 Holliday junction DNA helicase RuvB P-loop domain ITG12_22510 PF17864 RuvB AAA lid domain ITG12_22510 PF05491 RuvB C-terminal winged helix domain ITG12_22525 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) ITG12_22540 PF03466 LysR substrate binding domain ITG12_22540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_22545 PF00709 Adenylosuccinate synthetase ITG12_22555 PF00563 EAL domain ITG12_22555 PF13185 GAF domain ITG12_22555 PF00990 Diguanylate cyclase, GGDEF domain ITG12_22560 PF00710 Asparaginase, N-terminal ITG12_22560 PF17763 Glutaminase/Asparaginase C-terminal domain ITG12_22570 PF07690 Major Facilitator Superfamily ITG12_22575 PF03618 Kinase/pyrophosphorylase ITG12_22580 PF02896 PEP-utilising enzyme, TIM barrel domain ITG12_22580 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain ITG12_22580 PF00391 PEP-utilising enzyme, mobile domain ITG12_22590 PF00072 Response regulator receiver domain ITG12_22590 PF00196 Bacterial regulatory proteins, luxR family ITG12_22595 PF00579 tRNA synthetases class I (W and Y) ITG12_22620 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_22620 PF03466 LysR substrate binding domain ITG12_22630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_22630 PF03466 LysR substrate binding domain ITG12_22635 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ITG12_22640 PF00873 AcrB/AcrD/AcrF family ITG12_22645 PF02321 Outer membrane efflux protein ITG12_22655 PF02600 Disulfide bond formation protein DsbB ITG12_22660 PF03616 Sodium/glutamate symporter ITG12_22670 PF00072 Response regulator receiver domain ITG12_22670 PF00990 Diguanylate cyclase, GGDEF domain ITG12_22680 PF00196 Bacterial regulatory proteins, luxR family ITG12_22685 PF02836 Glycosyl hydrolases family 2, TIM barrel domain ITG12_22685 PF02837 Glycosyl hydrolases family 2, sugar binding domain ITG12_22685 PF00703 Glycosyl hydrolases family 2 ITG12_22685 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 ITG12_22690 PF02028 BCCT, betaine/carnitine/choline family transporter ITG12_22695 PF00501 AMP-binding enzyme ITG12_22695 PF13193 AMP-binding enzyme C-terminal domain ITG12_22715 PF00873 AcrB/AcrD/AcrF family ITG12_22725 PF00873 AcrB/AcrD/AcrF family ITG12_22730 PF13533 Biotin-lipoyl like ITG12_22735 PF13091 PLD-like domain ITG12_22760 PF00376 MerR family regulatory protein ITG12_22760 PF09278 MerR, DNA binding ITG12_22765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_22765 PF03466 LysR substrate binding domain ITG12_22775 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ITG12_22775 PF13378 Enolase C-terminal domain-like ITG12_22780 PF00679 Elongation factor G C-terminus ITG12_22780 PF14492 Elongation Factor G, domain II ITG12_22780 PF03764 Elongation factor G, domain IV ITG12_22780 PF03144 Elongation factor Tu domain 2 ITG12_22780 PF00009 Elongation factor Tu GTP binding domain ITG12_22800 PF02001 Protein of unknown function DUF134 ITG12_22810 PF00528 Binding-protein-dependent transport system inner membrane component ITG12_22815 PF00005 ABC transporter ITG12_22815 PF00571 CBS domain ITG12_22830 PF01048 Phosphorylase superfamily ITG12_22835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_22835 PF03466 LysR substrate binding domain ITG12_22845 PF13276 HTH-like domain ITG12_22845 PF00665 Integrase core domain ITG12_22845 PF13333 Integrase core domain ITG12_22850 PF00665 Integrase core domain ITG12_22850 PF13333 Integrase core domain ITG12_22850 PF13276 HTH-like domain ITG12_22875 PF06942 GlpM protein ITG12_22885 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ITG12_22885 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ITG12_22895 PF00857 Isochorismatase family ITG12_22900 PF00080 Copper/zinc superoxide dismutase (SODC) ITG12_22910 PF00199 Catalase ITG12_22910 PF06628 Catalase-related immune-responsive ITG12_22930 PF01238 Phosphomannose isomerase type I ITG12_22935 PF00155 Aminotransferase class I and II ITG12_22940 PF02378 Phosphotransferase system, EIIC ITG12_22940 PF00367 phosphotransferase system, EIIB ITG12_22945 PF00356 Bacterial regulatory proteins, lacI family ITG12_22945 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family ITG12_22950 PF00455 DeoR C terminal sensor domain ITG12_22950 PF08220 DeoR-like helix-turn-helix domain ITG12_22955 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ITG12_22960 PF01641 SelR domain ITG12_22960 PF01625 Peptide methionine sulfoxide reductase ITG12_22975 PF07971 Glycosyl hydrolase family 92 ITG12_22975 PF17678 Glycosyl hydrolase family 92 N-terminal domain ITG12_22980 PF07971 Glycosyl hydrolase family 92 ITG12_22980 PF17678 Glycosyl hydrolase family 92 N-terminal domain ITG12_22990 PF07971 Glycosyl hydrolase family 92 ITG12_22990 PF17678 Glycosyl hydrolase family 92 N-terminal domain ITG12_22995 PF17678 Glycosyl hydrolase family 92 N-terminal domain ITG12_22995 PF07971 Glycosyl hydrolase family 92 ITG12_23030 PF03466 LysR substrate binding domain ITG12_23030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_23035 PF01810 LysE type translocator ITG12_23040 PF00581 Rhodanese-like domain ITG12_23055 PF00440 Bacterial regulatory proteins, tetR family ITG12_23055 PF13977 BetI-type transcriptional repressor, C-terminal ITG12_23065 PF03466 LysR substrate binding domain ITG12_23065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_23080 PF12848 ABC transporter ITG12_23080 PF00005 ABC transporter ITG12_23090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_23090 PF03466 LysR substrate binding domain ITG12_23100 PF03358 NADPH-dependent FMN reductase ITG12_23105 PF03466 LysR substrate binding domain ITG12_23105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_23110 PF09905 DNA-binding protein VF530 ITG12_23115 PF00005 ABC transporter ITG12_23115 PF12848 ABC transporter ITG12_23130 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ITG12_23135 PF02567 Phenazine biosynthesis-like protein ITG12_23150 PF05114 Protein of unknown function (DUF692) ITG12_23165 PF01654 Cytochrome bd terminal oxidase subunit I ITG12_23170 PF02322 Cytochrome bd terminal oxidase subunit II ITG12_23195 PF01228 Glycine radical ITG12_23195 PF02901 Pyruvate formate lyase-like ITG12_23200 PF04055 Radical SAM superfamily ITG12_23205 PF00923 Transaldolase/Fructose-6-phosphate aldolase ITG12_23220 PF00512 His Kinase A (phospho-acceptor) domain ITG12_23220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_23220 PF00672 HAMP domain ITG12_23225 PF00486 Transcriptional regulatory protein, C terminal ITG12_23225 PF00072 Response regulator receiver domain ITG12_23235 PF00583 Acetyltransferase (GNAT) family ITG12_23240 PF00113 Enolase, C-terminal TIM barrel domain ITG12_23240 PF03952 Enolase, N-terminal domain ITG12_23250 PF07690 Major Facilitator Superfamily ITG12_23255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_23255 PF03466 LysR substrate binding domain ITG12_23280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_23280 PF03466 LysR substrate binding domain ITG12_23285 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family ITG12_23295 PF00892 EamA-like transporter family ITG12_23315 PF13533 Biotin-lipoyl like ITG12_23325 PF01594 AI-2E family transporter ITG12_23330 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) ITG12_23335 PF13276 HTH-like domain ITG12_23335 PF00665 Integrase core domain ITG12_23335 PF13333 Integrase core domain ITG12_23340 PF13276 HTH-like domain ITG12_23340 PF13333 Integrase core domain ITG12_23340 PF00665 Integrase core domain ITG12_23360 PF00970 Oxidoreductase FAD-binding domain ITG12_23360 PF00175 Oxidoreductase NAD-binding domain ITG12_23370 PF09905 DNA-binding protein VF530 ITG12_23375 PF03466 LysR substrate binding domain ITG12_23375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_23385 PF00881 Nitroreductase family ITG12_23395 PF00128 Alpha amylase, catalytic domain ITG12_23395 PF00686 Starch binding domain ITG12_23400 PF07943 Penicillin-binding protein 5, C-terminal domain ITG12_23400 PF00768 D-alanyl-D-alanine carboxypeptidase ITG12_23405 PF00561 alpha/beta hydrolase fold ITG12_23410 PF13673 Acetyltransferase (GNAT) domain ITG12_23420 PF00268 Ribonucleotide reductase, small chain ITG12_23425 PF02867 Ribonucleotide reductase, barrel domain ITG12_23425 PF03477 ATP cone domain ITG12_23425 PF00317 Ribonucleotide reductase, all-alpha domain ITG12_23430 PF00581 Rhodanese-like domain ITG12_23430 PF17773 UPF0176 acylphosphatase like domain ITG12_23450 PF00875 DNA photolyase ITG12_23450 PF03441 FAD binding domain of DNA photolyase ITG12_23455 PF02469 Fasciclin domain ITG12_23465 PF01734 Patatin-like phospholipase ITG12_23470 PF01914 MarC family integral membrane protein ITG12_23475 PF00881 Nitroreductase family ITG12_23480 PF18412 Outer-membrane lipoprotein Wza C-terminal domain ITG12_23480 PF02563 Polysaccharide biosynthesis/export protein ITG12_23480 PF10531 SLBB domain ITG12_23485 PF01451 Low molecular weight phosphotyrosine protein phosphatase ITG12_23490 PF13614 AAA domain ITG12_23490 PF13807 G-rich domain on putative tyrosine kinase ITG12_23490 PF02706 Chain length determinant protein ITG12_23505 PF08803 Putative mono-oxygenase ydhR ITG12_23510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_23510 PF03466 LysR substrate binding domain ITG12_23540 PF00375 Sodium:dicarboxylate symporter family ITG12_23550 PF06803 Protein of unknown function (DUF1232) ITG12_23555 PF01546 Peptidase family M20/M25/M40 ITG12_23555 PF07687 Peptidase dimerisation domain ITG12_23560 PF07670 Nucleoside recognition ITG12_23565 PF07670 Nucleoside recognition ITG12_23590 PF00128 Alpha amylase, catalytic domain ITG12_23595 PF00912 Transglycosylase ITG12_23600 PF01546 Peptidase family M20/M25/M40 ITG12_23600 PF07687 Peptidase dimerisation domain ITG12_23605 PF03806 AbgT putative transporter family ITG12_23610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_23610 PF03466 LysR substrate binding domain ITG12_23615 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ITG12_23615 PF02806 Alpha amylase, C-terminal all-beta domain ITG12_23615 PF00128 Alpha amylase, catalytic domain ITG12_23620 PF02446 4-alpha-glucanotransferase ITG12_23625 PF00343 Carbohydrate phosphorylase ITG12_23630 PF00196 Bacterial regulatory proteins, luxR family ITG12_23630 PF17874 MalT-like TPR region ITG12_23645 PF02630 SCO1/SenC ITG12_23655 PF02378 Phosphotransferase system, EIIC ITG12_23655 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ITG12_23655 PF00367 phosphotransferase system, EIIB ITG12_23660 PF03193 RsgA GTPase ITG12_23665 PF00375 Sodium:dicarboxylate symporter family ITG12_23670 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ITG12_23670 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ITG12_23685 PF01116 Fructose-bisphosphate aldolase class-II ITG12_23695 PF00294 pfkB family carbohydrate kinase ITG12_23700 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ITG12_23700 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ITG12_23705 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ITG12_23705 PF00205 Thiamine pyrophosphate enzyme, central domain ITG12_23705 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ITG12_23710 PF01261 Xylose isomerase-like TIM barrel ITG12_23715 PF00083 Sugar (and other) transporter ITG12_23735 PF00108 Thiolase, N-terminal domain ITG12_23735 PF02803 Thiolase, C-terminal domain ITG12_23740 PF01144 Coenzyme A transferase ITG12_23745 PF01144 Coenzyme A transferase ITG12_23755 PF08543 Phosphomethylpyrimidine kinase ITG12_23765 PF13520 Amino acid permease ITG12_23770 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ITG12_23770 PF01276 Orn/Lys/Arg decarboxylase, major domain ITG12_23770 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain ITG12_23785 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ITG12_23785 PF11852 Domain of unknown function (DUF3372) ITG12_23785 PF03714 Bacterial pullanase-associated domain ITG12_23785 PF18494 Pullulanase Ins domain ITG12_23785 PF17967 Pullulanase N2 domain ITG12_23790 PF04231 Endonuclease I ITG12_23795 PF00128 Alpha amylase, catalytic domain ITG12_23795 PF02903 Alpha amylase, N-terminal ig-like domain ITG12_23810 PF02264 LamB porin ITG12_23815 PF00128 Alpha amylase, catalytic domain ITG12_23815 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) ITG12_23820 PF00990 Diguanylate cyclase, GGDEF domain ITG12_23830 PF10414 Sirohaem synthase dimerisation region ITG12_23830 PF14824 Sirohaem biosynthesis protein central ITG12_23830 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ITG12_23835 PF17179 4Fe-4S dicluster domain ITG12_23840 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B ITG12_23840 PF00175 Oxidoreductase NAD-binding domain ITG12_23845 PF13187 4Fe-4S dicluster domain ITG12_23845 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ITG12_23845 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ITG12_23860 PF00239 Resolvase, N terminal domain ITG12_23860 PF02796 Helix-turn-helix domain of resolvase ITG12_23865 PF07690 Major Facilitator Superfamily ITG12_23870 PF06224 Winged helix DNA-binding domain ITG12_23875 PF00892 EamA-like transporter family ITG12_23880 PF00593 TonB dependent receptor ITG12_23880 PF07715 TonB-dependent Receptor Plug Domain ITG12_23885 PF03466 LysR substrate binding domain ITG12_23885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_23890 PF01497 Periplasmic binding protein ITG12_23895 PF01032 FecCD transport family ITG12_23900 PF01032 FecCD transport family ITG12_23905 PF00005 ABC transporter ITG12_23910 PF08361 MAATS-type transcriptional repressor, C-terminal region ITG12_23910 PF00440 Bacterial regulatory proteins, tetR family ITG12_23920 PF13533 Biotin-lipoyl like ITG12_23930 PF01551 Peptidase family M23 ITG12_23930 PF04225 Opacity-associated protein A LysM-like domain ITG12_23945 PF01081 KDPG and KHG aldolase ITG12_23950 PF00294 pfkB family carbohydrate kinase ITG12_23955 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ITG12_23955 PF00367 phosphotransferase system, EIIB ITG12_23955 PF02378 Phosphotransferase system, EIIC ITG12_23960 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ITG12_23960 PF13378 Enolase C-terminal domain-like ITG12_23965 PF07702 UTRA domain ITG12_23965 PF00392 Bacterial regulatory proteins, gntR family ITG12_23970 PF00144 Beta-lactamase ITG12_23975 PF07075 Protein of unknown function (DUF1343) ITG12_23980 PF01915 Glycosyl hydrolase family 3 C-terminal domain ITG12_23980 PF00933 Glycosyl hydrolase family 3 N terminal domain ITG12_24000 PF02753 Pili assembly chaperone PapD, C-terminal domain ITG12_24000 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain ITG12_24005 PF00577 Outer membrane usher protein ITG12_24005 PF13954 PapC N-terminal domain ITG12_24005 PF13953 PapC C-terminal domain ITG12_24035 PF05193 Peptidase M16 inactive domain ITG12_24035 PF00675 Insulinase (Peptidase family M16) ITG12_24045 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ITG12_24045 PF03625 Domain of unknown function DUF302 ITG12_24050 PF16325 Peptidase family U32 C-terminal domain ITG12_24050 PF01136 Peptidase family U32 ITG12_24060 PF08787 Alginate lyase ITG12_24070 PF00132 Bacterial transferase hexapeptide (six repeats) ITG12_24075 PF00474 Sodium:solute symporter family ITG12_24080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_24080 PF03466 LysR substrate binding domain ITG12_24095 PF00005 ABC transporter ITG12_24100 PF12704 MacB-like periplasmic core domain ITG12_24100 PF02687 FtsX-like permease family ITG12_24155 PF02566 OsmC-like protein ITG12_24160 PF01047 MarR family ITG12_24165 PF10417 C-terminal domain of 1-Cys peroxiredoxin ITG12_24165 PF00578 AhpC/TSA family ITG12_24170 PF07992 Pyridine nucleotide-disulphide oxidoreductase ITG12_24170 PF13192 Thioredoxin domain ITG12_24190 PF02447 GntP family permease ITG12_24195 PF01261 Xylose isomerase-like TIM barrel ITG12_24200 PF00596 Class II Aldolase and Adducin N-terminal domain ITG12_24205 PF17042 Nucleotide-binding C-terminal domain ITG12_24205 PF07005 Sugar-binding N-terminal domain ITG12_24210 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ITG12_24210 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ITG12_24215 PF00455 DeoR C terminal sensor domain ITG12_24215 PF08220 DeoR-like helix-turn-helix domain ITG12_24235 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ITG12_24240 PF02743 Cache domain ITG12_24240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG12_24240 PF00672 HAMP domain ITG12_24245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_24245 PF03466 LysR substrate binding domain ITG12_24250 PF02056 Family 4 glycosyl hydrolase ITG12_24250 PF11975 Family 4 glycosyl hydrolase C-terminal domain ITG12_24260 PF01810 LysE type translocator ITG12_24265 PF01037 Lrp/AsnC ligand binding domain ITG12_24265 PF13404 AsnC-type helix-turn-helix domain ITG12_24280 PF03473 MOSC domain ITG12_24280 PF03475 3-alpha domain ITG12_24285 PF13673 Acetyltransferase (GNAT) domain ITG12_24295 PF00356 Bacterial regulatory proteins, lacI family ITG12_24300 PF03553 Na+/H+ antiporter family ITG12_24305 PF00155 Aminotransferase class I and II ITG12_24310 PF06629 MltA-interacting protein MipA ITG12_24315 PF00271 Helicase conserved C-terminal domain ITG12_24315 PF00270 DEAD/DEAH box helicase ITG12_24330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_24330 PF03466 LysR substrate binding domain ITG12_24335 PF03786 D-mannonate dehydratase (UxuA) ITG12_24340 PF07729 FCD domain ITG12_24340 PF00392 Bacterial regulatory proteins, gntR family ITG12_24345 PF03480 Bacterial extracellular solute-binding protein, family 7 ITG12_24350 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ITG12_24355 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ITG12_24360 PF01232 Mannitol dehydrogenase Rossmann domain ITG12_24360 PF08125 Mannitol dehydrogenase C-terminal domain ITG12_24365 PF02614 Glucuronate isomerase ITG12_24370 PF00294 pfkB family carbohydrate kinase ITG12_24375 PF01081 KDPG and KHG aldolase ITG12_24380 PF10688 Bacterial inner membrane protein ITG12_24385 PF00933 Glycosyl hydrolase family 3 N terminal domain ITG12_24395 PF00440 Bacterial regulatory proteins, tetR family ITG12_24400 PF00696 Amino acid kinase family ITG12_24405 PF13520 Amino acid permease ITG12_24410 PF04371 Porphyromonas-type peptidyl-arginine deiminase ITG12_24415 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ITG12_24415 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ITG12_24420 PF01042 Endoribonuclease L-PSP ITG12_24435 PF00664 ABC transporter transmembrane region ITG12_24435 PF00005 ABC transporter ITG12_24445 PF01037 Lrp/AsnC ligand binding domain ITG12_24460 PF00300 Histidine phosphatase superfamily (branch 1) ITG12_24465 PF13302 Acetyltransferase (GNAT) domain ITG12_24485 PF00474 Sodium:solute symporter family ITG12_24495 PF18327 Proline utilization A proline dehydrogenase N-terminal domain ITG12_24495 PF01619 Proline dehydrogenase ITG12_24495 PF00171 Aldehyde dehydrogenase family ITG12_24495 PF14850 DNA-binding domain of Proline dehydrogenase ITG12_24500 PF12833 Helix-turn-helix domain ITG12_24510 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region ITG12_24510 PF01243 Pyridoxamine 5'-phosphate oxidase ITG12_24515 PF02743 Cache domain ITG12_24515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_24515 PF00512 His Kinase A (phospho-acceptor) domain ITG12_24520 PF02954 Bacterial regulatory protein, Fis family ITG12_24520 PF00072 Response regulator receiver domain ITG12_24520 PF00158 Sigma-54 interaction domain ITG12_24525 PF00529 HlyD membrane-fusion protein of T1SS ITG12_24540 PF00005 ABC transporter ITG12_24540 PF03412 Peptidase C39 family ITG12_24540 PF00664 ABC transporter transmembrane region ITG12_24550 PF03358 NADPH-dependent FMN reductase ITG12_24555 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ITG12_24560 PF00246 Zinc carboxypeptidase ITG12_24565 PF01380 SIS domain ITG12_24565 PF01418 Helix-turn-helix domain, rpiR family ITG12_24570 PF01380 SIS domain ITG12_24575 PF02378 Phosphotransferase system, EIIC ITG12_24575 PF00367 phosphotransferase system, EIIB ITG12_24580 PF00267 Gram-negative porin ITG12_24590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_24590 PF03466 LysR substrate binding domain ITG12_24595 PF00132 Bacterial transferase hexapeptide (six repeats) ITG12_24605 PF05127 Helicase ITG12_24605 PF13718 GNAT acetyltransferase 2 ITG12_24610 PF08775 ParB family ITG12_24610 PF02195 ParB-like nuclease domain ITG12_24615 PF13614 AAA domain ITG12_24615 PF18607 ParA helix turn helix domain ITG12_24630 PF00005 ABC transporter ITG12_24630 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ITG12_24635 PF00005 ABC transporter ITG12_24635 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ITG12_24645 PF08719 Domain of unknown function (DUF1768) ITG12_24645 PF00925 GTP cyclohydrolase II ITG12_24655 PF00672 HAMP domain ITG12_24655 PF17149 Periplasmic sensor domain found in signal transduction proteins ITG12_24655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_24655 PF00512 His Kinase A (phospho-acceptor) domain ITG12_24655 PF01627 Hpt domain ITG12_24655 PF00072 Response regulator receiver domain ITG12_24665 PF01709 Transcriptional regulator ITG12_24670 PF01098 Cell cycle protein ITG12_24680 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ITG12_24685 PF03466 LysR substrate binding domain ITG12_24685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_24695 PF00005 ABC transporter ITG12_24715 PF07694 5TMR of 5TMR-LYT ITG12_24715 PF13492 GAF domain ITG12_24715 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_24715 PF06580 Histidine kinase ITG12_24720 PF04397 LytTr DNA-binding domain ITG12_24720 PF00072 Response regulator receiver domain ITG12_24730 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ITG12_24735 PF17200 Single Cache domain 2 ITG12_24735 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG12_24735 PF00672 HAMP domain ITG12_24750 PF00132 Bacterial transferase hexapeptide (six repeats) ITG12_24755 PF03616 Sodium/glutamate symporter ITG12_24775 PF01593 Flavin containing amine oxidoreductase ITG12_24795 PF00005 ABC transporter ITG12_24800 PF00155 Aminotransferase class I and II ITG12_24800 PF00392 Bacterial regulatory proteins, gntR family ITG12_24805 PF03616 Sodium/glutamate symporter ITG12_24820 PF12833 Helix-turn-helix domain ITG12_24825 PF02386 Cation transport protein ITG12_24840 PF01774 UreD urease accessory protein ITG12_24845 PF00547 Urease, gamma subunit ITG12_24850 PF00699 Urease beta subunit ITG12_24855 PF01979 Amidohydrolase family ITG12_24855 PF00449 Urease alpha-subunit, N-terminal domain ITG12_24860 PF02814 UreE urease accessory protein, N-terminal domain ITG12_24860 PF05194 UreE urease accessory protein, C-terminal domain ITG12_24865 PF01730 UreF ITG12_24870 PF02492 CobW/HypB/UreG, nucleotide-binding domain ITG12_24880 PF12833 Helix-turn-helix domain ITG12_24885 PF00005 ABC transporter ITG12_24895 PF01032 FecCD transport family ITG12_24910 PF01042 Endoribonuclease L-PSP ITG12_24915 PF01272 Transcription elongation factor, GreA/GreB, C-term ITG12_24915 PF14760 Rnk N-terminus ITG12_24920 PF12833 Helix-turn-helix domain ITG12_24925 PF02492 CobW/HypB/UreG, nucleotide-binding domain ITG12_24935 PF00194 Eukaryotic-type carbonic anhydrase ITG12_24945 PF08220 DeoR-like helix-turn-helix domain ITG12_24945 PF00455 DeoR C terminal sensor domain ITG12_24950 PF03611 PTS system sugar-specific permease component ITG12_24955 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ITG12_24960 PF00596 Class II Aldolase and Adducin N-terminal domain ITG12_24970 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ITG12_24975 PF01261 Xylose isomerase-like TIM barrel ITG12_24990 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ITG12_25005 PF03466 LysR substrate binding domain ITG12_25005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_25010 PF07681 DoxX ITG12_25020 PF00730 HhH-GPD superfamily base excision DNA repair protein ITG12_25020 PF06029 AlkA N-terminal domain ITG12_25025 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ITG12_25025 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ITG12_25040 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ITG12_25050 PF03600 Citrate transporter ITG12_25070 PF08329 Chitinase A, N-terminal domain ITG12_25070 PF00704 Glycosyl hydrolases family 18 ITG12_25080 PF06865 Pyrimidine/purine nucleoside phosphorylase ITG12_25090 PF00563 EAL domain ITG12_25090 PF00990 Diguanylate cyclase, GGDEF domain ITG12_25095 PF02264 LamB porin ITG12_25100 PF00356 Bacterial regulatory proteins, lacI family ITG12_25110 PF00528 Binding-protein-dependent transport system inner membrane component ITG12_25115 PF00528 Binding-protein-dependent transport system inner membrane component ITG12_25120 PF00232 Glycosyl hydrolase family 1 ITG12_25125 PF00005 ABC transporter ITG12_25125 PF17912 MalK OB fold domain ITG12_25130 PF00356 Bacterial regulatory proteins, lacI family ITG12_25135 PF01554 MatE ITG12_25140 PF00849 RNA pseudouridylate synthase ITG12_25145 PF01809 Putative membrane protein insertion efficiency factor ITG12_25165 PF00990 Diguanylate cyclase, GGDEF domain ITG12_25165 PF17152 Periplasmic sensor domain ITG12_25175 PF05656 Protein of unknown function (DUF805) ITG12_25185 PF00756 Putative esterase ITG12_25190 PF00107 Zinc-binding dehydrogenase ITG12_25190 PF08240 Alcohol dehydrogenase GroES-like domain ITG12_25195 PF00797 N-acetyltransferase ITG12_25210 PF03466 LysR substrate binding domain ITG12_25210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_25220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_25220 PF03466 LysR substrate binding domain ITG12_25225 PF08021 Siderophore-interacting FAD-binding domain ITG12_25225 PF04954 Siderophore-interacting protein ITG12_25230 PF00326 Prolyl oligopeptidase family ITG12_25235 PF01810 LysE type translocator ITG12_25240 PF01037 Lrp/AsnC ligand binding domain ITG12_25245 PF18416 N-acetylglucosamine binding protein domain 2 ITG12_25245 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading ITG12_25255 PF00893 Small Multidrug Resistance protein ITG12_25270 PF01554 MatE ITG12_25285 PF13599 Pentapeptide repeats (9 copies) ITG12_25290 PF03922 OmpW family ITG12_25295 PF16868 NMT1-like family ITG12_25305 PF13533 Biotin-lipoyl like ITG12_25310 PF07690 Major Facilitator Superfamily ITG12_25320 PF12706 Beta-lactamase superfamily domain ITG12_25330 PF01204 Trehalase ITG12_25345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ITG12_25350 PF01810 LysE type translocator ITG12_25360 PF03466 LysR substrate binding domain ITG12_25360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_25365 PF03974 Ecotin ITG12_25380 PF01593 Flavin containing amine oxidoreductase ITG12_25400 PF03466 LysR substrate binding domain ITG12_25400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_25415 PF01773 Na+ dependent nucleoside transporter N-terminus ITG12_25415 PF07662 Na+ dependent nucleoside transporter C-terminus ITG12_25415 PF07670 Nucleoside recognition ITG12_25425 PF13419 Haloacid dehalogenase-like hydrolase ITG12_25465 PF05651 Putative sugar diacid recognition ITG12_25465 PF17853 GGDEF-like domain ITG12_25465 PF13556 PucR C-terminal helix-turn-helix domain ITG12_25470 PF02595 Glycerate kinase family ITG12_25475 PF00155 Aminotransferase class I and II ITG12_25475 PF00392 Bacterial regulatory proteins, gntR family ITG12_25520 PF00583 Acetyltransferase (GNAT) family ITG12_25550 PF03264 NapC/NirT cytochrome c family, N-terminal region ITG12_25555 PF00384 Molybdopterin oxidoreductase ITG12_25555 PF01568 Molydopterin dinucleotide binding domain ITG12_25555 PF18364 Molybdopterin oxidoreductase N-terminal domain ITG12_25570 PF00933 Glycosyl hydrolase family 3 N terminal domain ITG12_25575 PF02581 Thiamine monophosphate synthase ITG12_25580 PF02110 Hydroxyethylthiazole kinase family ITG12_25585 PF03070 TENA/THI-4/PQQC family ITG12_25590 PF09084 NMT1/THI5 like ITG12_25595 PF00528 Binding-protein-dependent transport system inner membrane component ITG12_25600 PF00005 ABC transporter ITG12_25605 PF08543 Phosphomethylpyrimidine kinase ITG12_25610 PF01523 Putative modulator of DNA gyrase ITG12_25615 PF01523 Putative modulator of DNA gyrase ITG12_25620 PF04013 Putative SAM-dependent RNA methyltransferase ITG12_25665 PF10928 Protein of unknown function (DUF2810) ITG12_25670 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ITG12_25670 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ITG12_25680 PF03009 Glycerophosphoryl diester phosphodiesterase family ITG12_25685 PF00072 Response regulator receiver domain ITG12_25685 PF00486 Transcriptional regulatory protein, C terminal ITG12_25690 PF00672 HAMP domain ITG12_25690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_25690 PF00512 His Kinase A (phospho-acceptor) domain ITG12_25690 PF16750 Sensor domain of 2-component histidine kinase ITG12_25695 PF07715 TonB-dependent Receptor Plug Domain ITG12_25695 PF00593 TonB dependent receptor ITG12_25705 PF01618 MotA/TolQ/ExbB proton channel family ITG12_25710 PF01618 MotA/TolQ/ExbB proton channel family ITG12_25715 PF02472 Biopolymer transport protein ExbD/TolR ITG12_25760 PF01297 Zinc-uptake complex component A periplasmic ITG12_25765 PF00005 ABC transporter ITG12_25770 PF00950 ABC 3 transport family ITG12_25785 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ITG12_25785 PF00326 Prolyl oligopeptidase family ITG12_25790 PF07690 Major Facilitator Superfamily ITG12_25795 PF00491 Arginase family ITG12_25800 PF17810 Arginine decarboxylase helical bundle domain ITG12_25800 PF17944 Arginine decarboxylase C-terminal helical extension ITG12_25800 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ITG12_25805 PF00753 Metallo-beta-lactamase superfamily ITG12_25810 PF08443 RimK-like ATP-grasp domain ITG12_25810 PF18030 RimK PreATP-grasp domain ITG12_25815 PF18030 RimK PreATP-grasp domain ITG12_25815 PF08443 RimK-like ATP-grasp domain ITG12_25825 PF12706 Beta-lactamase superfamily domain ITG12_25835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_25835 PF03466 LysR substrate binding domain ITG12_25860 PF00232 Glycosyl hydrolase family 1 ITG12_25865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_25865 PF02743 Cache domain ITG12_25865 PF00512 His Kinase A (phospho-acceptor) domain ITG12_25870 PF00158 Sigma-54 interaction domain ITG12_25870 PF00072 Response regulator receiver domain ITG12_25870 PF02954 Bacterial regulatory protein, Fis family ITG12_25875 PF05525 Branched-chain amino acid transport protein ITG12_25890 PF01266 FAD dependent oxidoreductase ITG12_25895 PF00182 Chitinase class I ITG12_25910 PF03116 NQR2, RnfD, RnfE family ITG12_25915 PF01212 Beta-eliminating lyase ITG12_25930 PF07670 Nucleoside recognition ITG12_25930 PF01773 Na+ dependent nucleoside transporter N-terminus ITG12_25930 PF07662 Na+ dependent nucleoside transporter C-terminus ITG12_25935 PF00483 Nucleotidyl transferase ITG12_25955 PF05230 MASE2 domain ITG12_25955 PF00990 Diguanylate cyclase, GGDEF domain ITG12_25970 PF00990 Diguanylate cyclase, GGDEF domain ITG12_25975 PF00875 DNA photolyase ITG12_25975 PF03441 FAD binding domain of DNA photolyase ITG12_25980 PF04244 Deoxyribodipyrimidine photo-lyase-related protein ITG12_25995 PF01641 SelR domain ITG12_25995 PF01625 Peptide methionine sulfoxide reductase ITG12_26000 PF02566 OsmC-like protein ITG12_26005 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal ITG12_26005 PF00132 Bacterial transferase hexapeptide (six repeats) ITG12_26005 PF14602 Hexapeptide repeat of succinyl-transferase ITG12_26020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_26020 PF03466 LysR substrate binding domain ITG12_26025 PF13419 Haloacid dehalogenase-like hydrolase ITG12_26065 PF00657 GDSL-like Lipase/Acylhydrolase ITG12_26070 PF00082 Subtilase family ITG12_26070 PF05922 Peptidase inhibitor I9 ITG12_26080 PF13419 Haloacid dehalogenase-like hydrolase ITG12_26085 PF00202 Aminotransferase class-III ITG12_26090 PF00266 Aminotransferase class-V ITG12_26100 PF00005 ABC transporter ITG12_26105 PF00528 Binding-protein-dependent transport system inner membrane component ITG12_26110 PF00392 Bacterial regulatory proteins, gntR family ITG12_26110 PF07702 UTRA domain ITG12_26125 PF04393 Protein of unknown function (DUF535) ITG12_26135 PF01266 FAD dependent oxidoreductase ITG12_26140 PF00246 Zinc carboxypeptidase ITG12_26140 PF18027 Cytosolic carboxypeptidase N-terminal domain ITG12_26145 PF01389 OmpA-like transmembrane domain ITG12_26145 PF00691 OmpA family ITG12_26150 PF03466 LysR substrate binding domain ITG12_26150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_26160 PF03466 LysR substrate binding domain ITG12_26160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_26170 PF01566 Natural resistance-associated macrophage protein ITG12_26175 PF00854 POT family ITG12_26180 PF03313 Serine dehydratase alpha chain ITG12_26180 PF03315 Serine dehydratase beta chain ITG12_26205 PF01476 LysM domain ITG12_26205 PF01464 Transglycosylase SLT domain ITG12_26225 PF00460 Flagella basal body rod protein ITG12_26230 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ITG12_26230 PF00460 Flagella basal body rod protein ITG12_26235 PF03963 Flagellar hook capping protein - N-terminal region ITG12_26235 PF13860 FlgD Ig-like domain ITG12_26235 PF13861 FlgD Tudor-like domain ITG12_26240 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ITG12_26240 PF00460 Flagella basal body rod protein ITG12_26240 PF07559 Flagellar basal body protein FlaE ITG12_26245 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ITG12_26245 PF00460 Flagella basal body rod protein ITG12_26250 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ITG12_26250 PF00460 Flagella basal body rod protein ITG12_26255 PF02107 Flagellar L-ring protein ITG12_26260 PF02119 Flagellar P-ring protein ITG12_26265 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ITG12_26265 PF10135 Rod binding protein ITG12_26270 PF00460 Flagella basal body rod protein ITG12_26270 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ITG12_26275 PF00700 Bacterial flagellin C-terminal helical region ITG12_26275 PF00669 Bacterial flagellin N-terminal helical region ITG12_26295 PF01070 FMN-dependent dehydrogenase ITG12_26300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_26300 PF03466 LysR substrate binding domain ITG12_26315 PF00291 Pyridoxal-phosphate dependent enzyme ITG12_26320 PF01037 Lrp/AsnC ligand binding domain ITG12_26330 PF01546 Peptidase family M20/M25/M40 ITG12_26330 PF07687 Peptidase dimerisation domain ITG12_26335 PF03480 Bacterial extracellular solute-binding protein, family 7 ITG12_26345 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ITG12_26350 PF00557 Metallopeptidase family M24 ITG12_26350 PF01321 Creatinase/Prolidase N-terminal domain ITG12_26360 PF03741 Integral membrane protein TerC family ITG12_26360 PF03471 Transporter associated domain ITG12_26360 PF00571 CBS domain ITG12_26365 PF00486 Transcriptional regulatory protein, C terminal ITG12_26365 PF18500 CadC C-terminal domain 1 ITG12_26380 PF13649 Methyltransferase domain ITG12_26400 PF00497 Bacterial extracellular solute-binding proteins, family 3 ITG12_26410 PF08000 Bacterial PH domain ITG12_26415 PF02567 Phenazine biosynthesis-like protein ITG12_26425 PF00282 Pyridoxal-dependent decarboxylase conserved domain ITG12_26440 PF13677 Membrane MotB of proton-channel complex MotA/MotB ITG12_26440 PF00691 OmpA family ITG12_26445 PF01618 MotA/TolQ/ExbB proton channel family ITG12_26450 PF04545 Sigma-70, region 4 ITG12_26450 PF04542 Sigma-70 region 2 ITG12_26455 PF03748 Flagellar basal body-associated protein FliL ITG12_26470 PF02561 Flagellar protein FliS ITG12_26475 PF02465 Flagellar hook-associated protein 2 N-terminus ITG12_26475 PF07195 Flagellar hook-associated protein 2 C-terminus ITG12_26475 PF07196 Flagellin hook IN motif ITG12_26485 PF00669 Bacterial flagellin N-terminal helical region ITG12_26485 PF00700 Bacterial flagellin C-terminal helical region ITG12_26495 PF00771 FHIPEP family ITG12_26500 PF01312 FlhB HrpN YscU SpaS Family ITG12_26505 PF01311 Bacterial export proteins, family 1 ITG12_26510 PF01313 Bacterial export proteins, family 3 ITG12_26515 PF00813 FliP family ITG12_26520 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ITG12_26530 PF00691 OmpA family ITG12_26530 PF01389 OmpA-like transmembrane domain ITG12_26535 PF00072 Response regulator receiver domain ITG12_26535 PF00158 Sigma-54 interaction domain ITG12_26535 PF02954 Bacterial regulatory protein, Fis family ITG12_26540 PF02049 Flagellar hook-basal body complex protein FliE ITG12_26545 PF01514 Secretory protein of YscJ/FliF family ITG12_26545 PF08345 Flagellar M-ring protein C-terminal ITG12_26550 PF01706 FliG C-terminal domain ITG12_26550 PF14841 FliG middle domain ITG12_26550 PF14842 FliG N-terminal domain ITG12_26560 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ITG12_26560 PF18269 T3SS EscN ATPase C-terminal domain ITG12_26570 PF00563 EAL domain ITG12_26570 PF05231 MASE1 ITG12_26580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_26580 PF03466 LysR substrate binding domain ITG12_26630 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ITG12_26635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_26635 PF03466 LysR substrate binding domain ITG12_26655 PF00486 Transcriptional regulatory protein, C terminal ITG12_26655 PF00072 Response regulator receiver domain ITG12_26660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ITG12_26660 PF08448 PAS fold ITG12_26660 PF13426 PAS domain ITG12_26660 PF00072 Response regulator receiver domain ITG12_26660 PF00512 His Kinase A (phospho-acceptor) domain ITG12_26665 PF00266 Aminotransferase class-V ITG12_26675 PF03707 Bacterial signalling protein N terminal repeat ITG12_26675 PF00563 EAL domain ITG12_26675 PF00990 Diguanylate cyclase, GGDEF domain ITG12_26680 PF00155 Aminotransferase class I and II ITG12_26685 PF00107 Zinc-binding dehydrogenase ITG12_26685 PF08240 Alcohol dehydrogenase GroES-like domain ITG12_26695 PF00194 Eukaryotic-type carbonic anhydrase ITG12_26700 PF00924 Mechanosensitive ion channel ITG12_26715 PF01070 FMN-dependent dehydrogenase ITG12_26720 PF02652 L-lactate permease ITG12_26725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ITG12_26725 PF03466 LysR substrate binding domain ITG12_26730 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ITG12_26730 PF00326 Prolyl oligopeptidase family ITG12_26735 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ITG12_26735 PF00005 ABC transporter ITG12_26745 PF13654 AAA domain ITG12_26745 PF05362 Lon protease (S16) C-terminal proteolytic domain ITG12_26750 PF12729 Four helix bundle sensory module for signal transduction ITG12_26750 PF00672 HAMP domain ITG12_26750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ITG12_26755 PF13609 Gram-negative porin ITG12_26760 PF07238 PilZ domain ITG12_26760 PF12945 Flagellar protein YcgR ITG12_26775 PF13302 Acetyltransferase (GNAT) domain ITG12_26780 PF12800 4Fe-4S binding domain ITG12_26780 PF12838 4Fe-4S dicluster domain ITG12_26785 PF12801 4Fe-4S binding domain ITG12_26785 PF12837 4Fe-4S binding domain ITG12_26800 PF01022 Bacterial regulatory protein, arsR family ITG12_26815 PF00005 ABC transporter ITG12_26815 PF12558 ATP-binding cassette cobalt transporter ITG12_26820 PF07155 ECF-type riboflavin transporter, S component ITG12_26825 PF00529 HlyD membrane-fusion protein of T1SS ITG12_26825 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion ITG12_26830 PF11742 Protein of unknown function (DUF3302) ITG12_26840 PF00990 Diguanylate cyclase, GGDEF domain ITG12_26855 PF01048 Phosphorylase superfamily ITG12_26860 PF08349 Protein of unknown function (DUF1722) ITG12_26865 PF13411 MerR HTH family regulatory protein ITG12_26870 PF03441 FAD binding domain of DNA photolyase ITG12_26870 PF00875 DNA photolyase ITG12_26875 PF03734 L,D-transpeptidase catalytic domain ITG12_26875 PF01476 LysM domain ITG12_26875 PF17969 L,D-transpeptidase C-terminal domain ITG12_26885 PF00271 Helicase conserved C-terminal domain ITG12_26885 PF00270 DEAD/DEAH box helicase ITG12_26895 PF00326 Prolyl oligopeptidase family ITG12_26895 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain ITG12_26900 PF07715 TonB-dependent Receptor Plug Domain ITG12_26900 PF00593 TonB dependent receptor ITG12_26930 PF14319 Transposase zinc-binding domain ITG12_26930 PF04986 Putative transposase ITG12_26950 PF13737 Transposase DDE domain ITG12_26960 PF00216 Bacterial DNA-binding protein ITG12_26980 PF16868 NMT1-like family ITG12_26985 PF13737 Transposase DDE domain ITG12_26995 PF04986 Putative transposase ITG12_26995 PF14319 Transposase zinc-binding domain ITG12_27000 PF04986 Putative transposase ITG12_27000 PF14319 Transposase zinc-binding domain ITG12_27005 PF04986 Putative transposase ITG12_27005 PF14319 Transposase zinc-binding domain ITG12_27020 PF12792 CSS motif domain associated with EAL ITG12_27020 PF00563 EAL domain ITG12_27035 PF00691 OmpA family ITG12_27035 PF01389 OmpA-like transmembrane domain ITG12_27045 PF02796 Helix-turn-helix domain of resolvase ITG12_27045 PF00239 Resolvase, N terminal domain ITG12_27075 PF00239 Resolvase, N terminal domain ITG12_27075 PF02796 Helix-turn-helix domain of resolvase ITG12_27115 PF13614 AAA domain ITG12_27120 PF04754 Putative transposase, YhgA-like ITG12_27150 PF04956 TrbC/VIRB2 family ITG12_27155 PF05101 Type IV secretory pathway, VirB3-like protein ITG12_27160 PF03135 CagE, TrbE, VirB family, component of type IV transporter system ITG12_27170 PF00437 Type II/IV secretion system protein ITG12_27180 PF04335 VirB8 protein ITG12_27185 PF03524 Conjugal transfer protein ITG12_27195 PF03743 Bacterial conjugation TrbI-like protein ITG12_27220 PF00437 Type II/IV secretion system protein ITG12_27255 PF02954 Bacterial regulatory protein, Fis family ITG12_27270 PF01464 Transglycosylase SLT domain ITG12_27315 PF01131 DNA topoisomerase ITG12_27315 PF01751 Toprim domain ITG12_27340 PF08401 Domain of unknown function (DUF1738) ITG12_27340 PF18818 Metallopeptidase superfamily domain ITG12_27340 PF13362 Toprim domain ITG12_27365 PF02796 Helix-turn-helix domain of resolvase ITG12_27365 PF00239 Resolvase, N terminal domain ITG12_27410 PF14319 Transposase zinc-binding domain ITG12_27410 PF04986 Putative transposase ITG12_27425 PF03372 Endonuclease/Exonuclease/phosphatase family ITG12_27435 PF00561 alpha/beta hydrolase fold ITG12_27455 PF00145 C-5 cytosine-specific DNA methylase ITG12_27455 PF13411 MerR HTH family regulatory protein ITG12_27460 PF09553 Eco47II restriction endonuclease ITG12_27490 PF01320 Colicin immunity protein / pyocin immunity protein ITG12_27505 PF13614 AAA domain ITG12_27510 PF08775 ParB family ITG12_27510 PF02195 ParB-like nuclease domain ITG12_27545 PF00239 Resolvase, N terminal domain ITG12_27545 PF02796 Helix-turn-helix domain of resolvase ITG12_27550 PF02796 Helix-turn-helix domain of resolvase ITG12_27550 PF00239 Resolvase, N terminal domain ITG12_27560 PF09520 Type II restriction endonuclease, TdeIII ITG12_27570 PF02796 Helix-turn-helix domain of resolvase ITG12_27570 PF00239 Resolvase, N terminal domain ITG12_27595 PF00145 C-5 cytosine-specific DNA methylase ITG12_27595 PF13411 MerR HTH family regulatory protein