locus-tag class description VEJY3_00010 PF00258 Flavodoxin VEJY3_00015 PF12631 MnmE helical domain VEJY3_00015 PF10396 GTP-binding protein TrmE N-terminus VEJY3_00015 PF01926 50S ribosome-binding GTPase VEJY3_00020 PF14849 YidC periplasmic domain VEJY3_00020 PF02096 60Kd inner membrane protein VEJY3_00025 PF01809 Putative membrane protein insertion efficiency factor VEJY3_00030 PF00825 Ribonuclease P VEJY3_00035 PF00468 Ribosomal protein L34 VEJY3_00040 PF00005 ABC transporter VEJY3_00045 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_00050 PF00497 Bacterial extracellular solute-binding proteins, family 3 VEJY3_00055 PF00308 Bacterial dnaA protein VEJY3_00055 PF08299 Bacterial dnaA protein helix-turn-helix VEJY3_00055 PF11638 DnaA N-terminal domain VEJY3_00060 PF02768 DNA polymerase III beta subunit, C-terminal domain VEJY3_00060 PF00712 DNA polymerase III beta subunit, N-terminal domain VEJY3_00060 PF02767 DNA polymerase III beta subunit, central domain VEJY3_00065 PF02463 RecF/RecN/SMC N terminal domain VEJY3_00070 PF01751 Toprim domain VEJY3_00070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_00070 PF18053 DNA gyrase B subunit insert domain VEJY3_00070 PF00986 DNA gyrase B subunit, carboxyl terminus VEJY3_00070 PF00204 DNA gyrase B VEJY3_00080 PF00011 Hsp20/alpha crystallin family VEJY3_00085 PF00155 Aminotransferase class I and II VEJY3_00090 PF00128 Alpha amylase, catalytic domain VEJY3_00095 PF05746 DALR anticodon binding domain VEJY3_00095 PF02092 Glycyl-tRNA synthetase beta subunit VEJY3_00100 PF02091 Glycyl-tRNA synthetase alpha subunit VEJY3_00105 PF01169 Uncharacterized protein family UPF0016 VEJY3_00115 PF01206 Sulfurtransferase TusA VEJY3_00125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_00125 PF03466 LysR substrate binding domain VEJY3_00130 PF00107 Zinc-binding dehydrogenase VEJY3_00130 PF08240 Alcohol dehydrogenase GroES-like domain VEJY3_00135 PF02803 Thiolase, C-terminal domain VEJY3_00135 PF00108 Thiolase, N-terminal domain VEJY3_00140 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VEJY3_00140 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VEJY3_00140 PF00378 Enoyl-CoA hydratase/isomerase VEJY3_00145 PF09186 Domain of unknown function (DUF1949) VEJY3_00145 PF01205 Uncharacterized protein family UPF0029 VEJY3_00150 PF02386 Cation transport protein VEJY3_00155 PF12724 Flavodoxin domain VEJY3_00160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_00160 PF03466 LysR substrate binding domain VEJY3_00165 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain VEJY3_00165 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain VEJY3_00170 PF04380 Membrane fusogenic activity VEJY3_00175 PF00873 AcrB/AcrD/AcrF family VEJY3_00180 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VEJY3_00185 PF00440 Bacterial regulatory proteins, tetR family VEJY3_00190 PF13361 UvrD-like helicase C-terminal domain VEJY3_00190 PF00580 UvrD/REP helicase N-terminal domain VEJY3_00195 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VEJY3_00210 PF00005 ABC transporter VEJY3_00210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VEJY3_00215 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VEJY3_00225 PF12911 N-terminal TM domain of oligopeptide transport permease C VEJY3_00225 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_00235 PF00356 Bacterial regulatory proteins, lacI family VEJY3_00235 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VEJY3_00240 PF00920 Dehydratase family VEJY3_00245 PF01202 Shikimate kinase VEJY3_00250 PF02447 GntP family permease VEJY3_00255 PF01081 KDPG and KHG aldolase VEJY3_00260 PF06228 Haem utilisation ChuX/HutX VEJY3_00265 PF07992 Pyridine nucleotide-disulphide oxidoreductase VEJY3_00265 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VEJY3_00270 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ VEJY3_00275 PF01432 Peptidase family M3 VEJY3_00280 PF01037 Lrp/AsnC ligand binding domain VEJY3_00285 PF04445 Putative SAM-dependent methyltransferase VEJY3_00295 PF00892 EamA-like transporter family VEJY3_00300 PF00582 Universal stress protein family VEJY3_00305 PF00210 Ferritin-like domain VEJY3_00310 PF10625 Universal stress protein B (UspB) VEJY3_00345 PF00263 Bacterial type II and III secretion system protein VEJY3_00345 PF13629 Pilus formation protein N terminal region VEJY3_00345 PF04972 BON domain VEJY3_00360 PF00437 Type II/IV secretion system protein VEJY3_00395 PF01243 Pyridoxamine 5'-phosphate oxidase VEJY3_00405 PF00005 ABC transporter VEJY3_00405 PF00664 ABC transporter transmembrane region VEJY3_00410 PF00005 ABC transporter VEJY3_00410 PF00664 ABC transporter transmembrane region VEJY3_00420 PF00563 EAL domain VEJY3_00420 PF00990 Diguanylate cyclase, GGDEF domain VEJY3_00420 PF03707 Bacterial signalling protein N terminal repeat VEJY3_00430 PF02646 RmuC family VEJY3_00435 PF01209 ubiE/COQ5 methyltransferase family VEJY3_00440 PF02036 SCP-2 sterol transfer family VEJY3_00445 PF03109 ABC1 family VEJY3_00450 PF02416 mttA/Hcf106 family VEJY3_00455 PF02416 mttA/Hcf106 family VEJY3_00460 PF00902 Sec-independent protein translocase protein (TatC) VEJY3_00465 PF03471 Transporter associated domain VEJY3_00465 PF02080 TrkA-C domain VEJY3_00465 PF00999 Sodium/hydrogen exchanger family VEJY3_00470 PF01026 TatD related DNase VEJY3_00475 PF00490 Delta-aminolevulinic acid dehydratase VEJY3_00490 PF01612 3'-5' exonuclease VEJY3_00490 PF01367 5'-3' exonuclease, C-terminal SAM fold VEJY3_00490 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VEJY3_00490 PF00476 DNA polymerase family A VEJY3_00495 PF01926 50S ribosome-binding GTPase VEJY3_00500 PF00034 Cytochrome c VEJY3_00510 PF04220 Der GTPase activator (YihI) VEJY3_00515 PF10675 Protein of unknown function (DUF2489) VEJY3_00520 PF04055 Radical SAM superfamily VEJY3_00520 PF06969 HemN C-terminal domain VEJY3_00525 PF00962 Adenosine/AMP deaminase VEJY3_00530 PF03707 Bacterial signalling protein N terminal repeat VEJY3_00530 PF00990 Diguanylate cyclase, GGDEF domain VEJY3_00530 PF00563 EAL domain VEJY3_00535 PF00158 Sigma-54 interaction domain VEJY3_00535 PF02954 Bacterial regulatory protein, Fis family VEJY3_00535 PF00072 Response regulator receiver domain VEJY3_00540 PF00512 His Kinase A (phospho-acceptor) domain VEJY3_00540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_00540 PF00989 PAS fold VEJY3_00550 PF03951 Glutamine synthetase, beta-Grasp domain VEJY3_00550 PF00120 Glutamine synthetase, catalytic domain VEJY3_00570 PF03631 Virulence factor BrkB VEJY3_00575 PF02580 D-Tyr-tRNA(Tyr) deacylase VEJY3_00580 PF09500 Putative thioesterase (yiiD_Cterm) VEJY3_00580 PF00583 Acetyltransferase (GNAT) family VEJY3_00590 PF01293 Phosphoenolpyruvate carboxykinase VEJY3_00595 PF01430 Hsp33 protein VEJY3_00600 PF01479 S4 domain VEJY3_00605 PF11356 Type II secretion system protein C VEJY3_00610 PF00263 Bacterial type II and III secretion system protein VEJY3_00610 PF03958 Bacterial type II/III secretion system short domain VEJY3_00615 PF00437 Type II/IV secretion system protein VEJY3_00620 PF00482 Type II secretion system (T2SS), protein F VEJY3_00625 PF08334 Type II secretion system (T2SS), protein G VEJY3_00625 PF07963 Prokaryotic N-terminal methylation motif VEJY3_00630 PF12019 Type II transport protein GspH VEJY3_00635 PF02501 Type II secretion system (T2SS), protein I VEJY3_00635 PF07963 Prokaryotic N-terminal methylation motif VEJY3_00640 PF11612 Type II secretion system (T2SS), protein J VEJY3_00640 PF07963 Prokaryotic N-terminal methylation motif VEJY3_00645 PF03934 Type II secretion system (T2SS), protein K VEJY3_00650 PF05134 Type II secretion system (T2SS), protein L VEJY3_00650 PF12693 GspL periplasmic domain VEJY3_00655 PF04612 Type II secretion system (T2SS), protein M VEJY3_00660 PF01203 Type II secretion system (T2SS), protein N VEJY3_00665 PF00459 Inositol monophosphatase family VEJY3_00670 PF00293 NUDIX domain VEJY3_00675 PF01521 Iron-sulphur cluster biosynthesis VEJY3_00675 PF01106 NifU-like domain VEJY3_00680 PF00156 Phosphoribosyl transferase domain VEJY3_00685 PF00561 alpha/beta hydrolase fold VEJY3_00695 PF16921 Tex protein YqgF-like domain VEJY3_00695 PF17674 HHH domain VEJY3_00695 PF09371 Tex-like protein N-terminal domain VEJY3_00695 PF00575 S1 RNA binding domain VEJY3_00705 PF01272 Transcription elongation factor, GreA/GreB, C-term VEJY3_00705 PF03449 Transcription elongation factor, N-terminal VEJY3_00715 PF00486 Transcriptional regulatory protein, C terminal VEJY3_00715 PF00072 Response regulator receiver domain VEJY3_00720 PF00672 HAMP domain VEJY3_00720 PF00512 His Kinase A (phospho-acceptor) domain VEJY3_00720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_00725 PF00860 Permease family VEJY3_00730 PF17191 RecG wedge domain VEJY3_00730 PF00271 Helicase conserved C-terminal domain VEJY3_00730 PF00270 DEAD/DEAH box helicase VEJY3_00735 PF00588 SpoU rRNA Methylase family VEJY3_00735 PF12105 SpoU, rRNA methylase, C-terminal VEJY3_00740 PF04607 Region found in RelA / SpoT proteins VEJY3_00740 PF02824 TGS domain VEJY3_00740 PF13291 ACT domain VEJY3_00745 PF01192 RNA polymerase Rpb6 VEJY3_00750 PF00625 Guanylate kinase VEJY3_00765 PF02472 Biopolymer transport protein ExbD/TolR VEJY3_00770 PF01618 MotA/TolQ/ExbB proton channel family VEJY3_00785 PF00593 TonB dependent receptor VEJY3_00785 PF07715 TonB-dependent Receptor Plug Domain VEJY3_00790 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_00795 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_00795 PF12911 N-terminal TM domain of oligopeptide transport permease C VEJY3_00800 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VEJY3_00805 PF00005 ABC transporter VEJY3_00805 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VEJY3_00810 PF00005 ABC transporter VEJY3_00810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VEJY3_00835 PF08340 Domain of unknown function (DUF1732) VEJY3_00835 PF03755 YicC-like family, N-terminal region VEJY3_00840 PF01138 3' exoribonuclease family, domain 1 VEJY3_00840 PF03725 3' exoribonuclease family, domain 2 VEJY3_00845 PF00156 Phosphoribosyl transferase domain VEJY3_00850 PF03279 Bacterial lipid A biosynthesis acyltransferase VEJY3_00855 PF00440 Bacterial regulatory proteins, tetR family VEJY3_00860 PF02441 Flavoprotein VEJY3_00860 PF04127 DNA / pantothenate metabolism flavoprotein VEJY3_00865 PF04002 RadC-like JAB domain VEJY3_00870 PF00830 Ribosomal L28 family VEJY3_00875 PF00471 Ribosomal protein L33 VEJY3_00885 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain VEJY3_00885 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain VEJY3_00885 PF06827 Zinc finger found in FPG and IleRS VEJY3_00890 PF01467 Cytidylyltransferase-like VEJY3_00895 PF00534 Glycosyl transferases group 1 VEJY3_00895 PF13439 Glycosyltransferase Family 4 VEJY3_00900 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VEJY3_00910 PF13439 Glycosyltransferase Family 4 VEJY3_00910 PF00534 Glycosyl transferases group 1 VEJY3_00915 PF01219 Prokaryotic diacylglycerol kinase VEJY3_00925 PF03275 UDP-galactopyranose mutase VEJY3_00940 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) VEJY3_00945 PF01075 Glycosyltransferase family 9 (heptosyltransferase) VEJY3_00950 PF03279 Bacterial lipid A biosynthesis acyltransferase VEJY3_00955 PF01370 NAD dependent epimerase/dehydratase family VEJY3_00960 PF06082 Exopolysaccharide biosynthesis protein YbjH VEJY3_00990 PF02706 Chain length determinant protein VEJY3_00995 PF16363 GDP-mannose 4,6 dehydratase VEJY3_01000 PF00483 Nucleotidyl transferase VEJY3_01005 PF04321 RmlD substrate binding domain VEJY3_01010 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase VEJY3_01045 PF01050 Mannose-6-phosphate isomerase VEJY3_01045 PF00483 Nucleotidyl transferase VEJY3_01050 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VEJY3_01050 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VEJY3_01050 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VEJY3_01050 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VEJY3_01055 PF01238 Phosphomannose isomerase type I VEJY3_01060 PF00535 Glycosyl transferase family 2 VEJY3_01065 PF02397 Bacterial sugar transferase VEJY3_01070 PF18412 Outer-membrane lipoprotein Wza C-terminal domain VEJY3_01070 PF02563 Polysaccharide biosynthesis/export protein VEJY3_01070 PF10531 SLBB domain VEJY3_01075 PF01451 Low molecular weight phosphotyrosine protein phosphatase VEJY3_01080 PF13807 G-rich domain on putative tyrosine kinase VEJY3_01080 PF13614 AAA domain VEJY3_01080 PF02706 Chain length determinant protein VEJY3_01085 PF01370 NAD dependent epimerase/dehydratase family VEJY3_01090 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain VEJY3_01090 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VEJY3_01090 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VEJY3_01095 PF01370 NAD dependent epimerase/dehydratase family VEJY3_01120 PF00534 Glycosyl transferases group 1 VEJY3_01120 PF13439 Glycosyltransferase Family 4 VEJY3_01125 PF00535 Glycosyl transferase family 2 VEJY3_01140 PF00535 Glycosyl transferase family 2 VEJY3_01145 PF13439 Glycosyltransferase Family 4 VEJY3_01145 PF00534 Glycosyl transferases group 1 VEJY3_01150 PF00534 Glycosyl transferases group 1 VEJY3_01150 PF13477 Glycosyl transferase 4-like VEJY3_01155 PF01050 Mannose-6-phosphate isomerase VEJY3_01155 PF00483 Nucleotidyl transferase VEJY3_01160 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VEJY3_01160 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VEJY3_01160 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VEJY3_01160 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VEJY3_01165 PF01238 Phosphomannose isomerase type I VEJY3_01170 PF00953 Glycosyl transferase family 4 VEJY3_01175 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain VEJY3_01175 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain VEJY3_01175 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain VEJY3_01180 PF00483 Nucleotidyl transferase VEJY3_01185 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain VEJY3_01185 PF00753 Metallo-beta-lactamase superfamily VEJY3_01185 PF10996 Beta-Casp domain VEJY3_01195 PF00121 Triosephosphate isomerase VEJY3_01205 PF05686 Glycosyl transferase family 90 VEJY3_01210 PF05656 Protein of unknown function (DUF805) VEJY3_01220 PF08220 DeoR-like helix-turn-helix domain VEJY3_01220 PF00455 DeoR C terminal sensor domain VEJY3_01225 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded VEJY3_01230 PF06005 Cell division protein ZapB VEJY3_01235 PF03737 Aldolase/RraA VEJY3_01240 PF01040 UbiA prenyltransferase family VEJY3_01245 PF00004 ATPase family associated with various cellular activities (AAA) VEJY3_01245 PF07724 AAA domain (Cdc48 subfamily) VEJY3_01250 PF00227 Proteasome subunit VEJY3_01260 PF00356 Bacterial regulatory proteins, lacI family VEJY3_01265 PF00271 Helicase conserved C-terminal domain VEJY3_01265 PF00270 DEAD/DEAH box helicase VEJY3_01265 PF18074 Primosomal protein N C-terminal domain VEJY3_01265 PF18319 PriA DNA helicase Cys-rich region (CRR) domain VEJY3_01265 PF17764 3′ DNA-binding domain (3′BD) VEJY3_01270 PF01197 Ribosomal protein L31 VEJY3_01275 PF00338 Ribosomal protein S10p/S20e VEJY3_01280 PF00297 Ribosomal protein L3 VEJY3_01285 PF00573 Ribosomal protein L4/L1 family VEJY3_01290 PF00276 Ribosomal protein L23 VEJY3_01295 PF03947 Ribosomal Proteins L2, C-terminal domain VEJY3_01295 PF00181 Ribosomal Proteins L2, RNA binding domain VEJY3_01300 PF00203 Ribosomal protein S19 VEJY3_01305 PF00237 Ribosomal protein L22p/L17e VEJY3_01310 PF00189 Ribosomal protein S3, C-terminal domain VEJY3_01310 PF07650 KH domain VEJY3_01315 PF00252 Ribosomal protein L16p/L10e VEJY3_01320 PF00831 Ribosomal L29 protein VEJY3_01325 PF00366 Ribosomal protein S17 VEJY3_01330 PF00238 Ribosomal protein L14p/L23e VEJY3_01335 PF00467 KOW motif VEJY3_01335 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 VEJY3_01340 PF00673 ribosomal L5P family C-terminus VEJY3_01340 PF00281 Ribosomal protein L5 VEJY3_01345 PF00253 Ribosomal protein S14p/S29e VEJY3_01350 PF00410 Ribosomal protein S8 VEJY3_01355 PF00347 Ribosomal protein L6 VEJY3_01360 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast VEJY3_01365 PF03719 Ribosomal protein S5, C-terminal domain VEJY3_01365 PF00333 Ribosomal protein S5, N-terminal domain VEJY3_01370 PF00327 Ribosomal protein L30p/L7e VEJY3_01380 PF00344 SecY translocase VEJY3_01385 PF00444 Ribosomal protein L36 VEJY3_01390 PF00416 Ribosomal protein S13/S18 VEJY3_01395 PF00411 Ribosomal protein S11 VEJY3_01400 PF00163 Ribosomal protein S4/S9 N-terminal domain VEJY3_01400 PF01479 S4 domain VEJY3_01405 PF01000 RNA polymerase Rpb3/RpoA insert domain VEJY3_01405 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain VEJY3_01405 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain VEJY3_01410 PF01196 Ribosomal protein L17 VEJY3_01420 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VEJY3_01420 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VEJY3_01430 PF13673 Acetyltransferase (GNAT) domain VEJY3_01435 PF00271 Helicase conserved C-terminal domain VEJY3_01435 PF03880 DbpA RNA binding domain VEJY3_01435 PF00270 DEAD/DEAH box helicase VEJY3_01445 PF00149 Calcineurin-like phosphoesterase VEJY3_01445 PF02872 5'-nucleotidase, C-terminal domain VEJY3_01450 PF14824 Sirohaem biosynthesis protein central VEJY3_01450 PF10414 Sirohaem synthase dimerisation region VEJY3_01450 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VEJY3_01455 PF01507 Phosphoadenosine phosphosulfate reductase family VEJY3_01460 PF00009 Elongation factor Tu GTP binding domain VEJY3_01465 PF03600 Citrate transporter VEJY3_01465 PF02080 TrkA-C domain VEJY3_01490 PF00005 ABC transporter VEJY3_01500 PF10795 Protein of unknown function (DUF2607) VEJY3_01505 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) VEJY3_01510 PF06526 Protein of unknown function (DUF1107) VEJY3_01515 PF01625 Peptide methionine sulfoxide reductase VEJY3_01520 PF07244 Surface antigen variable number repeat VEJY3_01520 PF17243 POTRA domain TamA domain 1 VEJY3_01520 PF01103 Surface antigen VEJY3_01525 PF04357 TamB, inner membrane protein subunit of TAM complex VEJY3_01530 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like VEJY3_01535 PF00719 Inorganic pyrophosphatase VEJY3_01540 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain VEJY3_01545 PF08245 Mur ligase middle domain VEJY3_01545 PF01225 Mur ligase family, catalytic domain VEJY3_01545 PF02875 Mur ligase family, glutamate ligase domain VEJY3_01550 PF02441 Flavoprotein VEJY3_01560 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_01565 PF00005 ABC transporter VEJY3_01570 PF00582 Universal stress protein family VEJY3_01585 PF02863 Arginine repressor, C-terminal domain VEJY3_01585 PF01316 Arginine repressor, DNA binding domain VEJY3_01590 PF00056 lactate/malate dehydrogenase, NAD binding domain VEJY3_01590 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain VEJY3_01600 PF00348 Polyprenyl synthetase VEJY3_01605 PF00829 Ribosomal prokaryotic L21 protein VEJY3_01610 PF01016 Ribosomal L27 protein VEJY3_01615 PF01018 GTP1/OBG VEJY3_01615 PF01926 50S ribosome-binding GTPase VEJY3_01620 PF06738 Putative threonine/serine exporter VEJY3_01625 PF12821 Threonine/Serine exporter, ThrE VEJY3_01630 PF00186 Dihydrofolate reductase VEJY3_01635 PF00149 Calcineurin-like phosphoesterase VEJY3_01640 PF04379 ApaG domain VEJY3_01645 PF00398 Ribosomal RNA adenine dimethylase VEJY3_01650 PF04166 Pyridoxal phosphate biosynthetic protein PdxA VEJY3_01655 PF09312 SurA N-terminal domain VEJY3_01660 PF04453 LPS transport system D VEJY3_01660 PF03968 OstA-like protein VEJY3_01665 PF05099 Tellurite resistance protein TerB VEJY3_01665 PF00226 DnaJ domain VEJY3_01675 PF00694 Aconitase C-terminal domain VEJY3_01680 PF00330 Aconitase family (aconitate hydratase) VEJY3_01685 PF00180 Isocitrate/isopropylmalate dehydrogenase VEJY3_01690 PF00682 HMGL-like VEJY3_01690 PF08502 LeuA allosteric (dimerisation) domain VEJY3_01700 PF01569 PAP2 superfamily VEJY3_01710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_01710 PF03466 LysR substrate binding domain VEJY3_01715 PF00501 AMP-binding enzyme VEJY3_01720 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VEJY3_01720 PF00205 Thiamine pyrophosphate enzyme, central domain VEJY3_01720 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VEJY3_01725 PF10369 Small subunit of acetolactate synthase VEJY3_01730 PF02887 Pyruvate kinase, alpha/beta domain VEJY3_01730 PF00224 Pyruvate kinase, barrel domain VEJY3_01735 PF08220 DeoR-like helix-turn-helix domain VEJY3_01735 PF00455 DeoR C terminal sensor domain VEJY3_01740 PF01380 SIS domain VEJY3_01745 PF01418 Helix-turn-helix domain, rpiR family VEJY3_01745 PF01380 SIS domain VEJY3_01750 PF00367 phosphotransferase system, EIIB VEJY3_01750 PF02378 Phosphotransferase system, EIIC VEJY3_01755 PF13580 SIS domain VEJY3_01760 PF05068 Mannitol repressor VEJY3_01765 PF01232 Mannitol dehydrogenase Rossmann domain VEJY3_01765 PF08125 Mannitol dehydrogenase C-terminal domain VEJY3_01770 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VEJY3_01770 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VEJY3_01770 PF02378 Phosphotransferase system, EIIC VEJY3_01780 PF01979 Amidohydrolase family VEJY3_01805 PF03180 NLPA lipoprotein VEJY3_01810 PF00669 Bacterial flagellin N-terminal helical region VEJY3_01810 PF07196 Flagellin hook IN motif VEJY3_01810 PF00700 Bacterial flagellin C-terminal helical region VEJY3_01815 PF03979 Sigma-70 factor, region 1.1 VEJY3_01815 PF00140 Sigma-70 factor, region 1.2 VEJY3_01815 PF04539 Sigma-70 region 3 VEJY3_01815 PF04545 Sigma-70, region 4 VEJY3_01815 PF04546 Sigma-70, non-essential region VEJY3_01815 PF04542 Sigma-70 region 2 VEJY3_01820 PF08278 DNA primase DnaG DnaB-binding VEJY3_01820 PF10410 DnaB-helicase binding domain of primase VEJY3_01820 PF01807 CHC2 zinc finger VEJY3_01820 PF08275 DNA primase catalytic core, N-terminal domain VEJY3_01825 PF09424 Yqey-like protein VEJY3_01830 PF01165 Ribosomal protein S21 VEJY3_01835 PF00814 Glycoprotease family VEJY3_01840 PF00561 alpha/beta hydrolase fold VEJY3_01845 PF02660 Glycerol-3-phosphate acyltransferase VEJY3_01850 PF02152 Dihydroneopterin aldolase VEJY3_01855 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VEJY3_01860 PF02673 Bacitracin resistance protein BacA VEJY3_01865 PF01743 Poly A polymerase head domain VEJY3_01865 PF12627 Probable RNA and SrmB- binding site of polymerase A VEJY3_01865 PF01966 HD domain VEJY3_01870 PF13401 AAA domain VEJY3_01870 PF01471 Putative peptidoglycan binding domain VEJY3_01880 PF08239 Bacterial SH3 domain VEJY3_01885 PF01384 Phosphate transporter family VEJY3_01890 PF01865 Protein of unknown function DUF47 VEJY3_01895 PF01928 CYTH domain VEJY3_01905 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VEJY3_01905 PF02743 Cache domain VEJY3_01905 PF00672 HAMP domain VEJY3_01910 PF03710 Glutamate-ammonia ligase adenylyltransferase VEJY3_01910 PF08335 GlnD PII-uridylyltransferase VEJY3_01915 PF00294 pfkB family carbohydrate kinase VEJY3_01915 PF01467 Cytidylyltransferase-like VEJY3_01920 PF02321 Outer membrane efflux protein VEJY3_01925 PF00293 NUDIX domain VEJY3_01930 PF06853 Protein of unknown function (DUF1249) VEJY3_01935 PF00149 Calcineurin-like phosphoesterase VEJY3_01940 PF05728 Uncharacterised protein family (UPF0227) VEJY3_01945 PF00204 DNA gyrase B VEJY3_01945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_01945 PF00986 DNA gyrase B subunit, carboxyl terminus VEJY3_01945 PF01751 Toprim domain VEJY3_01950 PF00521 DNA gyrase/topoisomerase IV, subunit A VEJY3_01950 PF03989 DNA gyrase C-terminal domain, beta-propeller VEJY3_01955 PF13180 PDZ domain VEJY3_01960 PF00595 PDZ domain VEJY3_01965 PF06295 Protein of unknown function (DUF1043) VEJY3_01970 PF03969 AFG1-like ATPase VEJY3_01975 PF00572 Ribosomal protein L13 VEJY3_01980 PF00380 Ribosomal protein S9/S16 VEJY3_01985 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal VEJY3_01985 PF00355 Rieske [2Fe-2S] domain VEJY3_01990 PF00032 Cytochrome b(C-terminal)/b6/petD VEJY3_01990 PF00033 Cytochrome b/b6/petB VEJY3_01995 PF02167 Cytochrome C1 family VEJY3_02000 PF00043 Glutathione S-transferase, C-terminal domain VEJY3_02000 PF02798 Glutathione S-transferase, N-terminal domain VEJY3_02005 PF04386 Stringent starvation protein B VEJY3_02010 PF04972 BON domain VEJY3_02015 PF13580 SIS domain VEJY3_02020 PF02021 Uncharacterised protein family UPF0102 VEJY3_02025 PF04348 LppC putative lipoprotein VEJY3_02030 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VEJY3_02040 PF01795 MraW methylase family VEJY3_02045 PF04999 Cell division protein FtsL VEJY3_02050 PF03717 Penicillin-binding Protein dimerisation domain VEJY3_02050 PF00905 Penicillin binding protein transpeptidase domain VEJY3_02055 PF02875 Mur ligase family, glutamate ligase domain VEJY3_02055 PF01225 Mur ligase family, catalytic domain VEJY3_02055 PF08245 Mur ligase middle domain VEJY3_02060 PF01225 Mur ligase family, catalytic domain VEJY3_02060 PF08245 Mur ligase middle domain VEJY3_02060 PF02875 Mur ligase family, glutamate ligase domain VEJY3_02065 PF00953 Glycosyl transferase family 4 VEJY3_02065 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 VEJY3_02070 PF02875 Mur ligase family, glutamate ligase domain VEJY3_02070 PF08245 Mur ligase middle domain VEJY3_02075 PF01098 Cell cycle protein VEJY3_02080 PF03033 Glycosyltransferase family 28 N-terminal domain VEJY3_02080 PF04101 Glycosyltransferase family 28 C-terminal domain VEJY3_02085 PF01225 Mur ligase family, catalytic domain VEJY3_02085 PF08245 Mur ligase middle domain VEJY3_02085 PF02875 Mur ligase family, glutamate ligase domain VEJY3_02090 PF03799 Cell division protein FtsQ VEJY3_02090 PF08478 POTRA domain, FtsQ-type VEJY3_02095 PF02491 SHS2 domain inserted in FTSA VEJY3_02100 PF12327 FtsZ family, C-terminal domain VEJY3_02100 PF00091 Tubulin/FtsZ family, GTPase domain VEJY3_02105 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase VEJY3_02115 PF01043 SecA preprotein cross-linking domain VEJY3_02115 PF07516 SecA Wing and Scaffold domain VEJY3_02115 PF02810 SEC-C motif VEJY3_02115 PF07517 SecA DEAD-like domain VEJY3_02120 PF00293 NUDIX domain VEJY3_02125 PF01113 Dihydrodipicolinate reductase, N-terminus VEJY3_02125 PF05173 Dihydrodipicolinate reductase, C-terminus VEJY3_02130 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain VEJY3_02130 PF00117 Glutamine amidotransferase class-I VEJY3_02135 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VEJY3_02135 PF02142 MGS-like domain VEJY3_02135 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain VEJY3_02140 PF01925 Sulfite exporter TauE/SafE VEJY3_02145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_02145 PF03466 LysR substrate binding domain VEJY3_02150 PF03458 UPF0126 domain VEJY3_02155 PF01497 Periplasmic binding protein VEJY3_02165 PF01048 Phosphorylase superfamily VEJY3_02175 PF07992 Pyridine nucleotide-disulphide oxidoreductase VEJY3_02175 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VEJY3_02180 PF01493 GXGXG motif VEJY3_02180 PF01645 Conserved region in glutamate synthase VEJY3_02180 PF04898 Glutamate synthase central domain VEJY3_02180 PF00310 Glutamine amidotransferases class-II VEJY3_02185 PF07992 Pyridine nucleotide-disulphide oxidoreductase VEJY3_02185 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster VEJY3_02190 PF01493 GXGXG motif VEJY3_02190 PF01645 Conserved region in glutamate synthase VEJY3_02190 PF04898 Glutamate synthase central domain VEJY3_02190 PF00310 Glutamine amidotransferases class-II VEJY3_02195 PF04055 Radical SAM superfamily VEJY3_02195 PF16199 Radical_SAM C-terminal domain VEJY3_02200 PF00512 His Kinase A (phospho-acceptor) domain VEJY3_02200 PF01627 Hpt domain VEJY3_02200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_02200 PF00989 PAS fold VEJY3_02200 PF00072 Response regulator receiver domain VEJY3_02200 PF18415 Histidine kinase receptor ArcB trans-membrane domain VEJY3_02210 PF00486 Transcriptional regulatory protein, C terminal VEJY3_02210 PF00072 Response regulator receiver domain VEJY3_02220 PF03737 Aldolase/RraA VEJY3_02230 PF03447 Homoserine dehydrogenase, NAD binding domain VEJY3_02230 PF00742 Homoserine dehydrogenase VEJY3_02230 PF13840 ACT domain VEJY3_02230 PF01842 ACT domain VEJY3_02230 PF00696 Amino acid kinase family VEJY3_02235 PF08544 GHMP kinases C terminal VEJY3_02235 PF00288 GHMP kinases N terminal domain VEJY3_02240 PF00291 Pyridoxal-phosphate dependent enzyme VEJY3_02240 PF14821 Threonine synthase N terminus VEJY3_02245 PF01228 Glycine radical VEJY3_02250 PF01261 Xylose isomerase-like TIM barrel VEJY3_02255 PF03167 Uracil DNA glycosylase superfamily VEJY3_02270 PF01235 Sodium:alanine symporter family VEJY3_02275 PF03883 Peroxide stress protein YaaA VEJY3_02280 PF00270 DEAD/DEAH box helicase VEJY3_02280 PF00271 Helicase conserved C-terminal domain VEJY3_02285 PF05175 Methyltransferase small domain VEJY3_02290 PF05525 Branched-chain amino acid transport protein VEJY3_02295 PF00258 Flavodoxin VEJY3_02300 PF02899 Phage integrase, N-terminal SAM-like domain VEJY3_02300 PF00589 Phage integrase family VEJY3_02305 PF10411 Disulfide bond isomerase protein N-terminus VEJY3_02305 PF13098 Thioredoxin-like domain VEJY3_02310 PF01368 DHH family VEJY3_02310 PF17768 RecJ OB domain VEJY3_02310 PF02272 DHHA1 domain VEJY3_02315 PF00472 RF-1 domain VEJY3_02315 PF03462 PCRF domain VEJY3_02320 PF00152 tRNA synthetases class II (D, K and N) VEJY3_02320 PF01336 OB-fold nucleic acid binding domain VEJY3_02325 PF00158 Sigma-54 interaction domain VEJY3_02325 PF00989 PAS fold VEJY3_02325 PF02954 Bacterial regulatory protein, Fis family VEJY3_02335 PF00248 Aldo/keto reductase family VEJY3_02345 PF02976 DNA mismatch repair enzyme MutH VEJY3_02350 PF00293 NUDIX domain VEJY3_02355 PF02896 PEP-utilising enzyme, TIM barrel domain VEJY3_02355 PF00391 PEP-utilising enzyme, mobile domain VEJY3_02355 PF01590 GAF domain VEJY3_02355 PF05524 PEP-utilising enzyme, N-terminal VEJY3_02360 PF01925 Sulfite exporter TauE/SafE VEJY3_02365 PF01790 Prolipoprotein diacylglyceryl transferase VEJY3_02370 PF00303 Thymidylate synthase VEJY3_02380 PF02690 Na+/Pi-cotransporter VEJY3_02385 PF03466 LysR substrate binding domain VEJY3_02385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_02390 PF01022 Bacterial regulatory protein, arsR family VEJY3_02395 PF01649 Ribosomal protein S20 VEJY3_02400 PF03023 Lipid II flippase MurJ VEJY3_02405 PF06574 FAD synthetase VEJY3_02405 PF01687 Riboflavin kinase VEJY3_02410 PF08264 Anticodon-binding domain of tRNA VEJY3_02410 PF06827 Zinc finger found in FPG and IleRS VEJY3_02410 PF00133 tRNA synthetases class I (I, L, M and V) VEJY3_02415 PF01252 Signal peptidase (SPase) II VEJY3_02420 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VEJY3_02425 PF02401 LytB protein VEJY3_02430 PF04397 LytTr DNA-binding domain VEJY3_02430 PF00072 Response regulator receiver domain VEJY3_02435 PF06580 Histidine kinase VEJY3_02435 PF07694 5TMR of 5TMR-LYT VEJY3_02440 PF02554 Carbon starvation protein CstA VEJY3_02455 PF01380 SIS domain VEJY3_02460 PF03702 Anhydro-N-acetylmuramic acid kinase VEJY3_02465 PF00933 Glycosyl hydrolase family 3 N terminal domain VEJY3_02470 PF00793 DAHP synthetase I family VEJY3_02475 PF01817 Chorismate mutase type II VEJY3_02475 PF02153 Prephenate dehydrogenase VEJY3_02480 PF04225 Opacity-associated protein A LysM-like domain VEJY3_02480 PF01551 Peptidase family M23 VEJY3_02485 PF00005 ABC transporter VEJY3_02485 PF12848 ABC transporter VEJY3_02490 PF14718 Soluble lytic murein transglycosylase L domain VEJY3_02490 PF01464 Transglycosylase SLT domain VEJY3_02495 PF01371 Trp repressor protein VEJY3_02500 PF01931 Protein of unknown function DUF84 VEJY3_02505 PF01817 Chorismate mutase type II VEJY3_02505 PF00800 Prephenate dehydratase VEJY3_02510 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VEJY3_02515 PF00497 Bacterial extracellular solute-binding proteins, family 3 VEJY3_02515 PF01464 Transglycosylase SLT domain VEJY3_02520 PF13525 Outer membrane lipoprotein VEJY3_02525 PF01479 S4 domain VEJY3_02525 PF00849 RNA pseudouridylate synthase VEJY3_02535 PF00004 ATPase family associated with various cellular activities (AAA) VEJY3_02535 PF17871 AAA lid domain VEJY3_02535 PF10431 C-terminal, D2-small domain, of ClpB protein VEJY3_02535 PF07724 AAA domain (Cdc48 subfamily) VEJY3_02535 PF02861 Clp amino terminal domain, pathogenicity island component VEJY3_02550 PF00005 ABC transporter VEJY3_02560 PF01979 Amidohydrolase family VEJY3_02570 PF03411 Penicillin-insensitive murein endopeptidase VEJY3_02580 PF00037 4Fe-4S binding domain VEJY3_02590 PF04381 Putative exonuclease, RdgC VEJY3_02600 PF00486 Transcriptional regulatory protein, C terminal VEJY3_02600 PF00072 Response regulator receiver domain VEJY3_02605 PF00512 His Kinase A (phospho-acceptor) domain VEJY3_02605 PF00989 PAS fold VEJY3_02605 PF11808 Phosphate regulon sensor protein PhoR VEJY3_02605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_02610 PF12849 PBP superfamily domain VEJY3_02615 PF02541 Ppx/GppA phosphatase family VEJY3_02620 PF17941 Polyphosphate kinase C-terminal domain 1 VEJY3_02620 PF13090 Polyphosphate kinase C-terminal domain 2 VEJY3_02620 PF02503 Polyphosphate kinase middle domain VEJY3_02620 PF13089 Polyphosphate kinase N-terminal domain VEJY3_02625 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_02630 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_02635 PF00005 ABC transporter VEJY3_02640 PF01895 PhoU domain VEJY3_02645 PF03976 Polyphosphate kinase 2 (PPK2) VEJY3_02650 PF03932 CutC family VEJY3_02655 PF10417 C-terminal domain of 1-Cys peroxiredoxin VEJY3_02655 PF00578 AhpC/TSA family VEJY3_02660 PF03466 LysR substrate binding domain VEJY3_02660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_02665 PF01274 Malate synthase VEJY3_02670 PF00463 Isocitrate lyase family VEJY3_02675 PF00571 CBS domain VEJY3_02685 PF02547 Queuosine biosynthesis protein VEJY3_02690 PF01702 Queuine tRNA-ribosyltransferase VEJY3_02695 PF02699 Preprotein translocase subunit VEJY3_02700 PF07549 SecD/SecF GG Motif VEJY3_02700 PF13721 SecD export protein N-terminal TM region VEJY3_02700 PF02355 Protein export membrane protein VEJY3_02705 PF07549 SecD/SecF GG Motif VEJY3_02705 PF02355 Protein export membrane protein VEJY3_02710 PF00459 Inositol monophosphatase family VEJY3_02715 PF00588 SpoU rRNA Methylase family VEJY3_02720 PF02082 Transcriptional regulator VEJY3_02725 PF00266 Aminotransferase class-V VEJY3_02730 PF01592 NifU-like N terminal domain VEJY3_02735 PF01521 Iron-sulphur cluster biosynthesis VEJY3_02740 PF07743 HSCB C-terminal oligomerisation domain VEJY3_02740 PF00226 DnaJ domain VEJY3_02745 PF00012 Hsp70 protein VEJY3_02750 PF00111 2Fe-2S iron-sulfur cluster binding domain VEJY3_02755 PF04384 Iron-sulphur cluster assembly VEJY3_02760 PF12404 Peptidase VEJY3_02760 PF00883 Cytosol aminopeptidase family, catalytic domain VEJY3_02765 PF00334 Nucleoside diphosphate kinase VEJY3_02770 PF04055 Radical SAM superfamily VEJY3_02775 PF13464 Domain of unknown function (DUF4115) VEJY3_02780 PF04551 GcpE protein VEJY3_02785 PF03129 Anticodon binding domain VEJY3_02785 PF13393 Histidyl-tRNA synthetase VEJY3_02790 PF09976 Tetratricopeptide repeat-like domain VEJY3_02795 PF13360 PQQ-like domain VEJY3_02800 PF01926 50S ribosome-binding GTPase VEJY3_02800 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal VEJY3_02815 PF13742 OB-fold nucleic acid binding domain VEJY3_02815 PF02601 Exonuclease VII, large subunit VEJY3_02820 PF00478 IMP dehydrogenase / GMP reductase domain VEJY3_02820 PF00571 CBS domain VEJY3_02825 PF00117 Glutamine amidotransferase class-I VEJY3_02825 PF00958 GMP synthase C terminal domain VEJY3_02825 PF02540 NAD synthase VEJY3_02830 PF01184 GPR1/FUN34/yaaH family VEJY3_02840 PF07690 Major Facilitator Superfamily VEJY3_02845 PF01546 Peptidase family M20/M25/M40 VEJY3_02845 PF07687 Peptidase dimerisation domain VEJY3_02850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_02850 PF03466 LysR substrate binding domain VEJY3_02855 PF01235 Sodium:alanine symporter family VEJY3_02860 PF01266 FAD dependent oxidoreductase VEJY3_02870 PF01053 Cys/Met metabolism PLP-dependent enzyme VEJY3_02875 PF00202 Aminotransferase class-III VEJY3_02895 PF00583 Acetyltransferase (GNAT) family VEJY3_02895 PF00795 Carbon-nitrogen hydrolase VEJY3_02900 PF03466 LysR substrate binding domain VEJY3_02900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_02905 PF00596 Class II Aldolase and Adducin N-terminal domain VEJY3_02910 PF06134 L-rhamnose isomerase (RhaA) VEJY3_02915 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VEJY3_02920 PF05336 L-rhamnose mutarotase VEJY3_02930 PF02311 AraC-like ligand binding domain VEJY3_02930 PF12833 Helix-turn-helix domain VEJY3_02950 PF07730 Histidine kinase VEJY3_02950 PF05384 Sensor protein DegS VEJY3_02950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_02955 PF00196 Bacterial regulatory proteins, luxR family VEJY3_02955 PF00072 Response regulator receiver domain VEJY3_02960 PF01668 SmpB protein VEJY3_02965 PF03364 Polyketide cyclase / dehydrase and lipid transport VEJY3_02970 PF03658 RnfH family Ubiquitin VEJY3_02975 PF04355 SmpA / OmlA family VEJY3_02980 PF02463 RecF/RecN/SMC N terminal domain VEJY3_02985 PF01513 ATP-NAD kinase VEJY3_02990 PF01025 GrpE VEJY3_02995 PF00375 Sodium:dicarboxylate symporter family VEJY3_03000 PF00012 Hsp70 protein VEJY3_03005 PF00684 DnaJ central domain VEJY3_03005 PF01556 DnaJ C terminal domain VEJY3_03005 PF00226 DnaJ domain VEJY3_03035 PF03806 AbgT putative transporter family VEJY3_03040 PF14437 MafB19-like deaminase VEJY3_03045 PF00497 Bacterial extracellular solute-binding proteins, family 3 VEJY3_03045 PF01464 Transglycosylase SLT domain VEJY3_03050 PF02769 AIR synthase related protein, C-terminal domain VEJY3_03050 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain VEJY3_03050 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal VEJY3_03085 PF07687 Peptidase dimerisation domain VEJY3_03085 PF01546 Peptidase family M20/M25/M40 VEJY3_03090 PF00860 Permease family VEJY3_03095 PF00156 Phosphoribosyl transferase domain VEJY3_03105 PF07417 Sigma factor-binding transcriptional regulator Crl VEJY3_03110 PF00696 Amino acid kinase family VEJY3_03110 PF01472 PUA domain VEJY3_03115 PF00171 Aldehyde dehydrogenase family VEJY3_03120 PF03477 ATP cone domain VEJY3_03125 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VEJY3_03125 PF01872 RibD C-terminal domain VEJY3_03130 PF00677 Lumazine binding domain VEJY3_03135 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase VEJY3_03135 PF00925 GTP cyclohydrolase II VEJY3_03140 PF00885 6,7-dimethyl-8-ribityllumazine synthase VEJY3_03145 PF01029 NusB family VEJY3_03150 PF00586 AIR synthase related protein, N-terminal domain VEJY3_03150 PF02769 AIR synthase related protein, C-terminal domain VEJY3_03155 PF04608 Phosphatidylglycerophosphatase A VEJY3_03160 PF02780 Transketolase, C-terminal domain VEJY3_03160 PF02779 Transketolase, pyrimidine binding domain VEJY3_03160 PF13292 1-deoxy-D-xylulose-5-phosphate synthase VEJY3_03165 PF00348 Polyprenyl synthetase VEJY3_03170 PF02609 Exonuclease VII small subunit VEJY3_03175 PF01618 MotA/TolQ/ExbB proton channel family VEJY3_03180 PF00691 OmpA family VEJY3_03185 PF02568 Thiamine biosynthesis protein (ThiI) VEJY3_03185 PF02926 THUMP domain VEJY3_03190 PF03466 LysR substrate binding domain VEJY3_03190 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_03200 PF04241 Protein of unknown function (DUF423) VEJY3_03205 PF18125 RlmM ferredoxin-like domain VEJY3_03205 PF01728 FtsJ-like methyltransferase VEJY3_03210 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain VEJY3_03210 PF01367 5'-3' exonuclease, C-terminal SAM fold VEJY3_03215 PF11892 Domain of unknown function (DUF3412) VEJY3_03215 PF03641 Possible lysine decarboxylase VEJY3_03215 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases VEJY3_03220 PF00072 Response regulator receiver domain VEJY3_03220 PF00990 Diguanylate cyclase, GGDEF domain VEJY3_03230 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term VEJY3_03230 PF14489 QueF-like protein VEJY3_03235 PF07348 Syd protein (SUKH-2) VEJY3_03240 PF10071 Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310) VEJY3_03245 PF03180 NLPA lipoprotein VEJY3_03250 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_03255 PF09383 NIL domain VEJY3_03255 PF00005 ABC transporter VEJY3_03265 PF00356 Bacterial regulatory proteins, lacI family VEJY3_03270 PF02378 Phosphotransferase system, EIIC VEJY3_03270 PF00367 phosphotransferase system, EIIB VEJY3_03275 PF00128 Alpha amylase, catalytic domain VEJY3_03275 PF16657 Maltogenic Amylase, C-terminal domain VEJY3_03285 PF00464 Serine hydroxymethyltransferase VEJY3_03290 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family VEJY3_03290 PF04055 Radical SAM superfamily VEJY3_03295 PF03099 Biotin/lipoate A/B protein ligase family VEJY3_03300 PF04359 Protein of unknown function (DUF493) VEJY3_03305 PF00768 D-alanyl-D-alanine carboxypeptidase VEJY3_03305 PF07943 Penicillin-binding protein 5, C-terminal domain VEJY3_03310 PF05036 Sporulation related domain VEJY3_03310 PF03330 Lytic transglycolase VEJY3_03315 PF01098 Cell cycle protein VEJY3_03320 PF03717 Penicillin-binding Protein dimerisation domain VEJY3_03320 PF00905 Penicillin binding protein transpeptidase domain VEJY3_03325 PF02590 Predicted SPOUT methyltransferase VEJY3_03335 PF14840 Processivity clamp loader gamma complex DNA pol III C-term VEJY3_03335 PF06144 DNA polymerase III, delta subunit VEJY3_03340 PF04390 Lipopolysaccharide-assembly VEJY3_03345 PF13603 Leucyl-tRNA synthetase, Domain 2 VEJY3_03345 PF00133 tRNA synthetases class I (I, L, M and V) VEJY3_03345 PF08264 Anticodon-binding domain of tRNA VEJY3_03350 PF07295 Zinc-ribbon containing domain VEJY3_03355 PF00795 Carbon-nitrogen hydrolase VEJY3_03360 PF00571 CBS domain VEJY3_03360 PF03471 Transporter associated domain VEJY3_03365 PF02130 Uncharacterized protein family UPF0054 VEJY3_03370 PF02562 PhoH-like protein VEJY3_03375 PF04055 Radical SAM superfamily VEJY3_03375 PF01938 TRAM domain VEJY3_03375 PF00919 Uncharacterized protein family UPF0004 VEJY3_03380 PF01494 FAD binding domain VEJY3_03385 PF06071 Protein of unknown function (DUF933) VEJY3_03385 PF01926 50S ribosome-binding GTPase VEJY3_03390 PF01195 Peptidyl-tRNA hydrolase VEJY3_03395 PF14572 Phosphoribosyl synthetase-associated domain VEJY3_03395 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase VEJY3_03400 PF00288 GHMP kinases N terminal domain VEJY3_03400 PF08544 GHMP kinases C terminal VEJY3_03405 PF03550 Outer membrane lipoprotein LolB VEJY3_03410 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain VEJY3_03410 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain VEJY3_03410 PF01488 Shikimate / quinate 5-dehydrogenase VEJY3_03415 PF00472 RF-1 domain VEJY3_03415 PF03462 PCRF domain VEJY3_03420 PF17827 PrmC N-terminal domain VEJY3_03420 PF13847 Methyltransferase domain VEJY3_03425 PF04247 Invasion gene expression up-regulator, SirB VEJY3_03430 PF13369 Transglutaminase-like superfamily VEJY3_03435 PF00793 DAHP synthetase I family VEJY3_03440 PF02872 5'-nucleotidase, C-terminal domain VEJY3_03440 PF00149 Calcineurin-like phosphoesterase VEJY3_03445 PF04073 Aminoacyl-tRNA editing domain VEJY3_03450 PF01479 S4 domain VEJY3_03450 PF00849 RNA pseudouridylate synthase VEJY3_03455 PF01713 Smr domain VEJY3_03485 PF00403 Heavy-metal-associated domain VEJY3_03490 PF00749 tRNA synthetases class I (E and Q), catalytic domain VEJY3_03495 PF01389 OmpA-like transmembrane domain VEJY3_03495 PF00691 OmpA family VEJY3_03535 PF00072 Response regulator receiver domain VEJY3_03535 PF01584 CheW-like domain VEJY3_03540 PF03705 CheR methyltransferase, all-alpha domain VEJY3_03540 PF01739 CheR methyltransferase, SAM binding domain VEJY3_03545 PF00460 Flagella basal body rod protein VEJY3_03550 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VEJY3_03550 PF00460 Flagella basal body rod protein VEJY3_03555 PF03963 Flagellar hook capping protein - N-terminal region VEJY3_03555 PF13860 FlgD Ig-like domain VEJY3_03555 PF13861 FlgD Tudor-like domain VEJY3_03560 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VEJY3_03560 PF00460 Flagella basal body rod protein VEJY3_03560 PF07559 Flagellar basal body protein FlaE VEJY3_03565 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VEJY3_03565 PF00460 Flagella basal body rod protein VEJY3_03570 PF00460 Flagella basal body rod protein VEJY3_03570 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VEJY3_03575 PF02107 Flagellar L-ring protein VEJY3_03580 PF02119 Flagellar P-ring protein VEJY3_03585 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase VEJY3_03585 PF10135 Rod binding protein VEJY3_03590 PF07196 Flagellin hook IN motif VEJY3_03590 PF06429 Flagellar basal body rod FlgEFG protein C-terminal VEJY3_03595 PF00669 Bacterial flagellin N-terminal helical region VEJY3_03600 PF00669 Bacterial flagellin N-terminal helical region VEJY3_03600 PF00700 Bacterial flagellin C-terminal helical region VEJY3_03600 PF07196 Flagellin hook IN motif VEJY3_03605 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VEJY3_03610 PF05524 PEP-utilising enzyme, N-terminal VEJY3_03610 PF00391 PEP-utilising enzyme, mobile domain VEJY3_03610 PF02896 PEP-utilising enzyme, TIM barrel domain VEJY3_03615 PF00381 PTS HPr component phosphorylation site VEJY3_03620 PF00291 Pyridoxal-phosphate dependent enzyme VEJY3_03630 PF04354 ZipA, C-terminal FtsZ-binding domain VEJY3_03635 PF03119 NAD-dependent DNA ligase C4 zinc finger domain VEJY3_03635 PF03120 NAD-dependent DNA ligase OB-fold domain VEJY3_03635 PF12826 Helix-hairpin-helix motif VEJY3_03635 PF01653 NAD-dependent DNA ligase adenylation domain VEJY3_03635 PF00533 BRCA1 C Terminus (BRCT) domain VEJY3_03640 PF03573 outer membrane porin, OprD family VEJY3_03660 PF16200 C-terminal region of band_7 VEJY3_03660 PF01145 SPFH domain / Band 7 family VEJY3_03665 PF00085 Thioredoxin VEJY3_03670 PF00106 short chain dehydrogenase VEJY3_03675 PF08338 Domain of unknown function (DUF1731) VEJY3_03675 PF01370 NAD dependent epimerase/dehydratase family VEJY3_03680 PF07556 Protein of unknown function (DUF1538) VEJY3_03685 PF07556 Protein of unknown function (DUF1538) VEJY3_03705 PF12850 Calcineurin-like phosphoesterase superfamily domain VEJY3_03720 PF17323 Trans-membrane regulatory protein ToxS VEJY3_03725 PF00486 Transcriptional regulatory protein, C terminal VEJY3_03730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_03730 PF00183 Hsp90 protein VEJY3_03735 PF05191 Adenylate kinase, active site lid VEJY3_03740 PF00762 Ferrochelatase VEJY3_03745 PF00854 POT family VEJY3_03750 PF02357 Transcription termination factor nusG VEJY3_03755 PF00733 Asparagine synthase VEJY3_03755 PF13537 Glutamine amidotransferase domain VEJY3_03760 PF00999 Sodium/hydrogen exchanger family VEJY3_03760 PF02254 TrkA-N domain VEJY3_03765 PF00480 ROK family VEJY3_03765 PF01047 MarR family VEJY3_03770 PF01979 Amidohydrolase family VEJY3_03775 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VEJY3_03775 PF00367 phosphotransferase system, EIIB VEJY3_03775 PF02378 Phosphotransferase system, EIIC VEJY3_03780 PF00749 tRNA synthetases class I (E and Q), catalytic domain VEJY3_03780 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain VEJY3_03785 PF01475 Ferric uptake regulator family VEJY3_03790 PF02774 Semialdehyde dehydrogenase, dimerisation domain VEJY3_03790 PF01118 Semialdehyde dehydrogenase, NAD binding domain VEJY3_03795 PF00258 Flavodoxin VEJY3_03805 PF12697 Alpha/beta hydrolase family VEJY3_03815 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VEJY3_03815 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VEJY3_03815 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VEJY3_03815 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VEJY3_03825 PF01784 NIF3 (NGG1p interacting factor 3) VEJY3_03830 PF00285 Citrate synthase, C-terminal domain VEJY3_03835 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit VEJY3_03840 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit VEJY3_03845 PF00890 FAD binding domain VEJY3_03845 PF02910 Fumarate reductase flavoprotein C-term VEJY3_03850 PF13085 2Fe-2S iron-sulfur cluster binding domain VEJY3_03855 PF02779 Transketolase, pyrimidine binding domain VEJY3_03855 PF16870 2-oxoglutarate dehydrogenase C-terminal VEJY3_03855 PF00676 Dehydrogenase E1 component VEJY3_03855 PF16078 2-oxoglutarate dehydrogenase N-terminus VEJY3_03860 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VEJY3_03860 PF00364 Biotin-requiring enzyme VEJY3_03860 PF02817 e3 binding domain VEJY3_03865 PF00549 CoA-ligase VEJY3_03865 PF08442 ATP-grasp domain VEJY3_03870 PF02629 CoA binding domain VEJY3_03870 PF00549 CoA-ligase VEJY3_03875 PF00950 ABC 3 transport family VEJY3_03880 PF00005 ABC transporter VEJY3_03885 PF01297 Zinc-uptake complex component A periplasmic VEJY3_03890 PF02311 AraC-like ligand binding domain VEJY3_03890 PF12833 Helix-turn-helix domain VEJY3_03895 PF04023 FeoA domain VEJY3_03900 PF07670 Nucleoside recognition VEJY3_03900 PF02421 Ferrous iron transport protein B VEJY3_03900 PF07664 Ferrous iron transport protein B C terminus VEJY3_03900 PF17910 FeoB cytosolic helical domain VEJY3_03915 PF03485 Arginyl tRNA synthetase N terminal domain VEJY3_03915 PF05746 DALR anticodon binding domain VEJY3_03915 PF00750 tRNA synthetases class I (R) VEJY3_03920 PF06185 YecM protein VEJY3_03930 PF00089 Trypsin VEJY3_03935 PF01842 ACT domain VEJY3_03935 PF00551 Formyl transferase VEJY3_03940 PF13307 Helicase C-terminal domain VEJY3_03940 PF04851 Type III restriction enzyme, res subunit VEJY3_03945 PF00814 Glycoprotease family VEJY3_03960 PF00561 alpha/beta hydrolase fold VEJY3_03965 PF00501 AMP-binding enzyme VEJY3_03965 PF13193 AMP-binding enzyme C-terminal domain VEJY3_03970 PF01612 3'-5' exonuclease VEJY3_03970 PF00570 HRDC domain VEJY3_03975 PF03776 Septum formation topological specificity factor MinE VEJY3_03980 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain VEJY3_03985 PF05209 Septum formation inhibitor MinC, N-terminal domain VEJY3_03985 PF03775 Septum formation inhibitor MinC, C-terminal domain VEJY3_03990 PF05166 YcgL domain VEJY3_03995 PF13406 Transglycosylase SLT domain VEJY3_04000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_04000 PF03466 LysR substrate binding domain VEJY3_04005 PF07662 Na+ dependent nucleoside transporter C-terminus VEJY3_04005 PF07670 Nucleoside recognition VEJY3_04005 PF01773 Na+ dependent nucleoside transporter N-terminus VEJY3_04010 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain VEJY3_04010 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain VEJY3_04050 PF00144 Beta-lactamase VEJY3_04070 PF00425 chorismate binding enzyme VEJY3_04075 PF13193 AMP-binding enzyme C-terminal domain VEJY3_04075 PF00501 AMP-binding enzyme VEJY3_04080 PF00550 Phosphopantetheine attachment site VEJY3_04080 PF00857 Isochorismatase family VEJY3_04085 PF00975 Thioesterase domain VEJY3_04085 PF00668 Condensation domain VEJY3_04085 PF13193 AMP-binding enzyme C-terminal domain VEJY3_04085 PF00501 AMP-binding enzyme VEJY3_04085 PF00975 Thioesterase domain VEJY3_04085 PF00550 Phosphopantetheine attachment site VEJY3_04085 PF00501 AMP-binding enzyme VEJY3_04085 PF00550 Phosphopantetheine attachment site VEJY3_04085 PF13193 AMP-binding enzyme C-terminal domain VEJY3_04085 PF00668 Condensation domain VEJY3_04100 PF07715 TonB-dependent Receptor Plug Domain VEJY3_04100 PF00593 TonB dependent receptor VEJY3_04105 PF00571 CBS domain VEJY3_04105 PF01595 Cyclin M transmembrane N-terminal domain VEJY3_04105 PF03471 Transporter associated domain VEJY3_04110 PF00271 Helicase conserved C-terminal domain VEJY3_04110 PF00270 DEAD/DEAH box helicase VEJY3_04115 PF02254 TrkA-N domain VEJY3_04115 PF02080 TrkA-C domain VEJY3_04120 PF02386 Cation transport protein VEJY3_04130 PF02696 Uncharacterized ACR, YdiU/UPF0061 family VEJY3_04135 PF00486 Transcriptional regulatory protein, C terminal VEJY3_04135 PF00072 Response regulator receiver domain VEJY3_04140 PF00672 HAMP domain VEJY3_04140 PF00512 His Kinase A (phospho-acceptor) domain VEJY3_04140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_04145 PF01547 Bacterial extracellular solute-binding protein VEJY3_04155 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_04160 PF03459 TOBE domain VEJY3_04160 PF00005 ABC transporter VEJY3_04160 PF17912 MalK OB fold domain VEJY3_04165 PF03480 Bacterial extracellular solute-binding protein, family 7 VEJY3_04170 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component VEJY3_04175 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VEJY3_04185 PF02954 Bacterial regulatory protein, Fis family VEJY3_04185 PF00072 Response regulator receiver domain VEJY3_04185 PF00158 Sigma-54 interaction domain VEJY3_04190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_04190 PF02743 Cache domain VEJY3_04190 PF00512 His Kinase A (phospho-acceptor) domain VEJY3_04200 PF05698 Bacterial trigger factor protein (TF) C-terminus VEJY3_04200 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VEJY3_04200 PF05697 Bacterial trigger factor protein (TF) VEJY3_04205 PF00574 Clp protease VEJY3_04210 PF07724 AAA domain (Cdc48 subfamily) VEJY3_04210 PF10431 C-terminal, D2-small domain, of ClpB protein VEJY3_04210 PF06689 ClpX C4-type zinc finger VEJY3_04215 PF02190 ATP-dependent protease La (LON) substrate-binding domain VEJY3_04215 PF00004 ATPase family associated with various cellular activities (AAA) VEJY3_04215 PF05362 Lon protease (S16) C-terminal proteolytic domain VEJY3_04220 PF00216 Bacterial DNA-binding protein VEJY3_04225 PF13145 PPIC-type PPIASE domain VEJY3_04245 PF01966 HD domain VEJY3_04245 PF13286 Phosphohydrolase-associated domain VEJY3_04255 PF00155 Aminotransferase class I and II VEJY3_04260 PF00425 chorismate binding enzyme VEJY3_04265 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VEJY3_04265 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VEJY3_04265 PF16582 Middle domain of thiamine pyrophosphate VEJY3_04270 PF12697 Alpha/beta hydrolase family VEJY3_04275 PF00378 Enoyl-CoA hydratase/isomerase VEJY3_04280 PF13378 Enolase C-terminal domain-like VEJY3_04285 PF13193 AMP-binding enzyme C-terminal domain VEJY3_04285 PF00501 AMP-binding enzyme VEJY3_04295 PF03601 Conserved hypothetical protein 698 VEJY3_04300 PF07690 Major Facilitator Superfamily VEJY3_04315 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VEJY3_04315 PF00529 HlyD membrane-fusion protein of T1SS VEJY3_04320 PF00873 AcrB/AcrD/AcrF family VEJY3_04330 PF00291 Pyridoxal-phosphate dependent enzyme VEJY3_04335 PF13404 AsnC-type helix-turn-helix domain VEJY3_04335 PF01037 Lrp/AsnC ligand binding domain VEJY3_04345 PF09619 Type III secretion system lipoprotein chaperone (YscW) VEJY3_04350 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain VEJY3_04360 PF03466 LysR substrate binding domain VEJY3_04360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_04365 PF00232 Glycosyl hydrolase family 1 VEJY3_04370 PF01266 FAD dependent oxidoreductase VEJY3_04375 PF00120 Glutamine synthetase, catalytic domain VEJY3_04380 PF00120 Glutamine synthetase, catalytic domain VEJY3_04385 PF00202 Aminotransferase class-III VEJY3_04390 PF13416 Bacterial extracellular solute-binding protein VEJY3_04395 PF08402 TOBE domain VEJY3_04395 PF00005 ABC transporter VEJY3_04400 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_04405 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_04415 PF00171 Aldehyde dehydrogenase family VEJY3_04420 PF00958 GMP synthase C terminal domain VEJY3_04420 PF00117 Glutamine amidotransferase class-I VEJY3_04425 PF08032 RNA 2'-O ribose methyltransferase substrate binding VEJY3_04425 PF00588 SpoU rRNA Methylase family VEJY3_04430 PF11953 Domain of unknown function (DUF3470) VEJY3_04430 PF00037 4Fe-4S binding domain VEJY3_04440 PF00571 CBS domain VEJY3_04440 PF00478 IMP dehydrogenase / GMP reductase domain VEJY3_04445 PF00403 Heavy-metal-associated domain VEJY3_04450 PF01048 Phosphorylase superfamily VEJY3_04460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VEJY3_04460 PF00672 HAMP domain VEJY3_04465 PF01230 HIT domain VEJY3_04480 PF08139 Prokaryotic membrane lipoprotein lipid attachment site VEJY3_04480 PF13036 Peptidoglycan-synthase activator LpoB VEJY3_04490 PF05728 Uncharacterised protein family (UPF0227) VEJY3_04495 PF07992 Pyridine nucleotide-disulphide oxidoreductase VEJY3_04510 PF02559 CarD-like/TRCF domain VEJY3_04510 PF00270 DEAD/DEAH box helicase VEJY3_04510 PF00271 Helicase conserved C-terminal domain VEJY3_04510 PF03461 TRCF domain VEJY3_04510 PF17757 UvrB interaction domain VEJY3_04520 PF12704 MacB-like periplasmic core domain VEJY3_04520 PF02687 FtsX-like permease family VEJY3_04525 PF00005 ABC transporter VEJY3_04530 PF02687 FtsX-like permease family VEJY3_04530 PF12704 MacB-like periplasmic core domain VEJY3_04540 PF00753 Metallo-beta-lactamase superfamily VEJY3_04540 PF13567 Domain of unknown function (DUF4131) VEJY3_04540 PF03772 Competence protein VEJY3_04545 PF00005 ABC transporter VEJY3_04545 PF00664 ABC transporter transmembrane region VEJY3_04550 PF02606 Tetraacyldisaccharide-1-P 4'-kinase VEJY3_04555 PF03966 Trm112p-like protein VEJY3_04560 PF02348 Cytidylyltransferase VEJY3_04570 PF04293 SpoVR like protein VEJY3_04575 PF04285 Protein of unknown function (DUF444) VEJY3_04580 PF08298 PrkA AAA domain VEJY3_04580 PF06798 PrkA serine protein kinase C-terminal domain VEJY3_04585 PF03887 YfbU domain VEJY3_04595 PF04055 Radical SAM superfamily VEJY3_04605 PF02901 Pyruvate formate lyase-like VEJY3_04605 PF01228 Glycine radical VEJY3_04620 PF00005 ABC transporter VEJY3_04625 PF00497 Bacterial extracellular solute-binding proteins, family 3 VEJY3_04630 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_04635 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_04640 PF03372 Endonuclease/Exonuclease/phosphatase family VEJY3_04650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_04650 PF03466 LysR substrate binding domain VEJY3_04655 PF03788 LrgA family VEJY3_04660 PF04172 LrgB-like family VEJY3_04665 PF10689 Protein of unknown function (DUF2496) VEJY3_04670 PF07445 Primosomal replication protein priC VEJY3_04675 PF01925 Sulfite exporter TauE/SafE VEJY3_04680 PF06733 DEAD_2 VEJY3_04680 PF13307 Helicase C-terminal domain VEJY3_04690 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VEJY3_04695 PF00849 RNA pseudouridylate synthase VEJY3_04700 PF03971 Monomeric isocitrate dehydrogenase VEJY3_04705 PF00313 'Cold-shock' DNA-binding domain VEJY3_04710 PF02617 ATP-dependent Clp protease adaptor protein ClpS VEJY3_04715 PF10431 C-terminal, D2-small domain, of ClpB protein VEJY3_04715 PF02861 Clp amino terminal domain, pathogenicity island component VEJY3_04715 PF17871 AAA lid domain VEJY3_04715 PF07724 AAA domain (Cdc48 subfamily) VEJY3_04715 PF00004 ATPase family associated with various cellular activities (AAA) VEJY3_04720 PF01176 Translation initiation factor 1A / IF-1 VEJY3_04725 PF04377 Arginine-tRNA-protein transferase, C terminus VEJY3_04725 PF04376 Arginine-tRNA-protein transferase, N terminus VEJY3_04730 PF03588 Leucyl/phenylalanyl-tRNA protein transferase VEJY3_04740 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VEJY3_04745 PF10692 Protein of unknown function (DUF2498) VEJY3_04750 PF08272 Topoisomerase I zinc-ribbon-like VEJY3_04750 PF01131 DNA topoisomerase VEJY3_04750 PF01751 Toprim domain VEJY3_04750 PF01396 Topoisomerase DNA binding C4 zinc finger VEJY3_04755 PF00483 Nucleotidyl transferase VEJY3_04760 PF08323 Starch synthase catalytic domain VEJY3_04760 PF00534 Glycosyl transferases group 1 VEJY3_04780 PF04994 TfoX C-terminal domain VEJY3_04780 PF04993 TfoX N-terminal domain VEJY3_04785 PF00356 Bacterial regulatory proteins, lacI family VEJY3_04790 PF02613 Nitrate reductase delta subunit VEJY3_04795 PF00486 Transcriptional regulatory protein, C terminal VEJY3_04795 PF00072 Response regulator receiver domain VEJY3_04800 PF02698 DUF218 domain VEJY3_04810 PF17192 MukF middle domain VEJY3_04810 PF17193 MukF C-terminal domain VEJY3_04810 PF03882 MukF winged-helix domain VEJY3_04815 PF04288 MukE-like family VEJY3_04820 PF16330 MukB hinge domain VEJY3_04820 PF04310 MukB N-terminal VEJY3_04825 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term VEJY3_04825 PF12833 Helix-turn-helix domain VEJY3_04830 PF00171 Aldehyde dehydrogenase family VEJY3_04835 PF00732 GMC oxidoreductase VEJY3_04835 PF05199 GMC oxidoreductase VEJY3_04845 PF18030 RimK PreATP-grasp domain VEJY3_04845 PF08443 RimK-like ATP-grasp domain VEJY3_04855 PF18030 RimK PreATP-grasp domain VEJY3_04855 PF08443 RimK-like ATP-grasp domain VEJY3_04860 PF08003 Protein of unknown function (DUF1698) VEJY3_04865 PF13649 Methyltransferase domain VEJY3_04870 PF01904 Protein of unknown function DUF72 VEJY3_04875 PF02938 GAD domain VEJY3_04875 PF00152 tRNA synthetases class II (D, K and N) VEJY3_04875 PF01336 OB-fold nucleic acid binding domain VEJY3_04880 PF02075 Crossover junction endodeoxyribonuclease RuvC VEJY3_04885 PF07499 RuvA, C-terminal domain VEJY3_04885 PF01330 RuvA N terminal domain VEJY3_04890 PF17864 RuvB AAA lid domain VEJY3_04890 PF05496 Holliday junction DNA helicase RuvB P-loop domain VEJY3_04890 PF05491 RuvB C-terminal winged helix domain VEJY3_04895 PF01654 Cytochrome bd terminal oxidase subunit I VEJY3_04900 PF02322 Cytochrome bd terminal oxidase subunit II VEJY3_04905 PF08173 Membrane bound YbgT-like protein VEJY3_04915 PF03061 Thioesterase superfamily VEJY3_04920 PF01618 MotA/TolQ/ExbB proton channel family VEJY3_04925 PF02472 Biopolymer transport protein ExbD/TolR VEJY3_04935 PF04052 TolB amino-terminal domain VEJY3_04935 PF07676 WD40-like Beta Propeller Repeat VEJY3_04940 PF00691 OmpA family VEJY3_04945 PF13174 Tetratricopeptide repeat VEJY3_04945 PF16331 TolA binding protein trimerisation VEJY3_04950 PF02445 Quinolinate synthetase A protein VEJY3_04960 PF03994 Domain of Unknown Function (DUF350) VEJY3_04970 PF03738 Glutathionylspermidine synthase preATP-grasp VEJY3_04985 PF03150 Di-haem cytochrome c peroxidase VEJY3_05005 PF09308 LuxQ, periplasmic VEJY3_05005 PF00512 His Kinase A (phospho-acceptor) domain VEJY3_05005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_05005 PF00072 Response regulator receiver domain VEJY3_05010 PF06610 L-alanine exporter VEJY3_05015 PF13356 Arm DNA-binding domain VEJY3_05015 PF00589 Phage integrase family VEJY3_05150 PF00589 Phage integrase family VEJY3_05150 PF13356 Arm DNA-binding domain VEJY3_05160 PF00665 Integrase core domain VEJY3_05160 PF13276 HTH-like domain VEJY3_05185 PF17757 UvrB interaction domain VEJY3_05185 PF12344 Ultra-violet resistance protein B VEJY3_05185 PF02151 UvrB/uvrC motif VEJY3_05185 PF04851 Type III restriction enzyme, res subunit VEJY3_05185 PF00271 Helicase conserved C-terminal domain VEJY3_05195 PF13476 AAA domain VEJY3_05205 PF00266 Aminotransferase class-V VEJY3_05250 PF03606 C4-dicarboxylate anaerobic carrier VEJY3_05255 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family VEJY3_05275 PF02195 ParB-like nuclease domain VEJY3_05275 PF08775 ParB family VEJY3_05305 PF13391 HNH endonuclease VEJY3_05310 PF00082 Subtilase family VEJY3_05315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_05315 PF03466 LysR substrate binding domain VEJY3_05320 PF16957 Malonate decarboxylase, alpha subunit, transporter VEJY3_05325 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase VEJY3_05330 PF06857 Malonate decarboxylase delta subunit (MdcD) VEJY3_05340 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG VEJY3_05345 PF00698 Acyl transferase domain VEJY3_05355 PF07883 Cupin domain VEJY3_05355 PF01381 Helix-turn-helix VEJY3_05360 PF03594 Benzoate membrane transport protein VEJY3_05365 PF00529 HlyD membrane-fusion protein of T1SS VEJY3_05365 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VEJY3_05370 PF00873 AcrB/AcrD/AcrF family VEJY3_05385 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) VEJY3_05395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_05395 PF03466 LysR substrate binding domain VEJY3_05405 PF01262 Alanine dehydrogenase/PNT, C-terminal domain VEJY3_05405 PF05222 Alanine dehydrogenase/PNT, N-terminal domain VEJY3_05410 PF01037 Lrp/AsnC ligand binding domain VEJY3_05415 PF09397 Ftsk gamma domain VEJY3_05415 PF17854 FtsK alpha domain VEJY3_05415 PF13491 4TM region of DNA translocase FtsK/SpoIIIE VEJY3_05415 PF01580 FtsK/SpoIIIE family VEJY3_05420 PF03548 Outer membrane lipoprotein carrier protein LolA VEJY3_05425 PF00004 ATPase family associated with various cellular activities (AAA) VEJY3_05425 PF12002 MgsA AAA+ ATPase C terminal VEJY3_05425 PF16193 AAA C-terminal domain VEJY3_05430 PF02403 Seryl-tRNA synthetase N-terminal domain VEJY3_05430 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VEJY3_05435 PF00202 Aminotransferase class-III VEJY3_05440 PF04055 Radical SAM superfamily VEJY3_05440 PF06968 Biotin and Thiamin Synthesis associated domain VEJY3_05445 PF00155 Aminotransferase class I and II VEJY3_05450 PF08241 Methyltransferase domain VEJY3_05465 PF01435 Peptidase family M48 VEJY3_05475 PF00106 short chain dehydrogenase VEJY3_05510 PF00206 Lyase VEJY3_05510 PF08328 Adenylosuccinate lyase C-terminal VEJY3_05515 PF04356 Protein of unknown function (DUF489) VEJY3_05530 PF00294 pfkB family carbohydrate kinase VEJY3_05535 PF00816 H-NS histone family VEJY3_05540 PF03553 Na+/H+ antiporter family VEJY3_05550 PF00072 Response regulator receiver domain VEJY3_05550 PF02954 Bacterial regulatory protein, Fis family VEJY3_05550 PF00158 Sigma-54 interaction domain VEJY3_05555 PF01634 ATP phosphoribosyltransferase VEJY3_05555 PF08029 HisG, C-terminal domain VEJY3_05560 PF00815 Histidinol dehydrogenase VEJY3_05565 PF00155 Aminotransferase class I and II VEJY3_05570 PF00475 Imidazoleglycerol-phosphate dehydratase VEJY3_05570 PF08645 Polynucleotide kinase 3 phosphatase VEJY3_05575 PF00117 Glutamine amidotransferase class-I VEJY3_05580 PF00977 Histidine biosynthesis protein VEJY3_05585 PF00977 Histidine biosynthesis protein VEJY3_05590 PF01502 Phosphoribosyl-AMP cyclohydrolase VEJY3_05590 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase VEJY3_05595 PF02810 SEC-C motif VEJY3_05600 PF08668 HDOD domain VEJY3_05600 PF00563 EAL domain VEJY3_05605 PF00149 Calcineurin-like phosphoesterase VEJY3_05610 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VEJY3_05615 PF01406 tRNA synthetases class I (C) catalytic domain VEJY3_05615 PF09190 DALR domain VEJY3_05620 PF00265 Thymidine kinase VEJY3_05625 PF02698 DUF218 domain VEJY3_05640 PF01226 Formate/nitrite transporter VEJY3_05650 PF03649 Uncharacterised protein family (UPF0014) VEJY3_05655 PF06796 Periplasmic nitrate reductase protein NapE VEJY3_05660 PF03264 NapC/NirT cytochrome c family, N-terminal region VEJY3_05665 PF00384 Molybdopterin oxidoreductase VEJY3_05665 PF18364 Molybdopterin oxidoreductase N-terminal domain VEJY3_05665 PF01568 Molydopterin dinucleotide binding domain VEJY3_05670 PF16874 Glycosyl hydrolase family 36 C-terminal domain VEJY3_05670 PF16875 Glycosyl hydrolase family 36 N-terminal domain VEJY3_05680 PF01368 DHH family VEJY3_05680 PF02833 DHHA2 domain VEJY3_05690 PF00005 ABC transporter VEJY3_05695 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VEJY3_05695 PF00005 ABC transporter VEJY3_05700 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_05700 PF12911 N-terminal TM domain of oligopeptide transport permease C VEJY3_05705 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_05710 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VEJY3_05715 PF00158 Sigma-54 interaction domain VEJY3_05715 PF02954 Bacterial regulatory protein, Fis family VEJY3_05720 PF04012 PspA/IM30 family VEJY3_05725 PF06667 Phage shock protein B VEJY3_05730 PF04024 PspC domain VEJY3_05735 PF13533 Biotin-lipoyl like VEJY3_05740 PF13533 Biotin-lipoyl like VEJY3_05745 PF00873 AcrB/AcrD/AcrF family VEJY3_05750 PF03352 Methyladenine glycosylase VEJY3_05755 PF01053 Cys/Met metabolism PLP-dependent enzyme VEJY3_05760 PF13396 Phospholipase_D-nuclease N-terminal VEJY3_05760 PF13091 PLD-like domain VEJY3_05765 PF00209 Sodium:neurotransmitter symporter family VEJY3_05770 PF00849 RNA pseudouridylate synthase VEJY3_05780 PF00111 2Fe-2S iron-sulfur cluster binding domain VEJY3_05780 PF00970 Oxidoreductase FAD-binding domain VEJY3_05780 PF00175 Oxidoreductase NAD-binding domain VEJY3_05785 PF03063 Prismane/CO dehydrogenase family VEJY3_05790 PF00158 Sigma-54 interaction domain VEJY3_05790 PF01590 GAF domain VEJY3_05800 PF01066 CDP-alcohol phosphatidyltransferase VEJY3_05805 PF00005 ABC transporter VEJY3_05810 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_05815 PF13416 Bacterial extracellular solute-binding protein VEJY3_05825 PF06945 Protein of unknown function (DUF1289) VEJY3_05835 PF00149 Calcineurin-like phosphoesterase VEJY3_05835 PF02872 5'-nucleotidase, C-terminal domain VEJY3_05840 PF01386 Ribosomal L25p family VEJY3_05845 PF00672 HAMP domain VEJY3_05845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_05845 PF00512 His Kinase A (phospho-acceptor) domain VEJY3_05845 PF13755 Sensor N-terminal transmembrane domain VEJY3_05845 PF13756 Stimulus-sensing domain VEJY3_05850 PF00486 Transcriptional regulatory protein, C terminal VEJY3_05850 PF00072 Response regulator receiver domain VEJY3_05860 PF00271 Helicase conserved C-terminal domain VEJY3_05860 PF04851 Type III restriction enzyme, res subunit VEJY3_05865 PF00849 RNA pseudouridylate synthase VEJY3_05865 PF01479 S4 domain VEJY3_05875 PF07690 Major Facilitator Superfamily VEJY3_05885 PF11854 Putative outer membrane beta-barrel porin, MtrB/PioB VEJY3_05890 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) VEJY3_05905 PF03264 NapC/NirT cytochrome c family, N-terminal region VEJY3_05910 PF11066 Protein of unknown function (DUF2867) VEJY3_05910 PF13460 NAD(P)H-binding VEJY3_05915 PF01554 MatE VEJY3_05920 PF00005 ABC transporter VEJY3_05935 PF06965 Na+/H+ antiporter 1 VEJY3_05940 PF16295 Tetracyclin repressor-like, C-terminal domain VEJY3_05940 PF00440 Bacterial regulatory proteins, tetR family VEJY3_05945 PF09317 Domain of unknown function (DUF1974) VEJY3_05945 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VEJY3_05945 PF02770 Acyl-CoA dehydrogenase, middle domain VEJY3_05945 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VEJY3_05950 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase VEJY3_05950 PF07055 Enoyl reductase FAD binding domain VEJY3_05950 PF12241 Trans-2-enoyl-CoA reductase catalytic region VEJY3_05955 PF06826 Predicted Permease Membrane Region VEJY3_05955 PF02080 TrkA-C domain VEJY3_05960 PF00462 Glutaredoxin VEJY3_05965 PF00171 Aldehyde dehydrogenase family VEJY3_05965 PF00465 Iron-containing alcohol dehydrogenase VEJY3_05970 PF01380 SIS domain VEJY3_05970 PF01418 Helix-turn-helix domain, rpiR family VEJY3_05975 PF00282 Pyridoxal-dependent decarboxylase conserved domain VEJY3_05985 PF03956 Lysine exporter LysO VEJY3_05995 PF04993 TfoX N-terminal domain VEJY3_05995 PF04994 TfoX C-terminal domain VEJY3_06010 PF00512 His Kinase A (phospho-acceptor) domain VEJY3_06010 PF00497 Bacterial extracellular solute-binding proteins, family 3 VEJY3_06010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_06020 PF00266 Aminotransferase class-V VEJY3_06025 PF00291 Pyridoxal-phosphate dependent enzyme VEJY3_06030 PF00664 ABC transporter transmembrane region VEJY3_06030 PF00005 ABC transporter VEJY3_06035 PF00005 ABC transporter VEJY3_06035 PF00664 ABC transporter transmembrane region VEJY3_06040 PF07992 Pyridine nucleotide-disulphide oxidoreductase VEJY3_06050 PF00266 Aminotransferase class-V VEJY3_06060 PF00939 Sodium:sulfate symporter transmembrane region VEJY3_06065 PF02698 DUF218 domain VEJY3_06070 PF03949 Malic enzyme, NAD binding domain VEJY3_06070 PF00390 Malic enzyme, N-terminal domain VEJY3_06075 PF04408 Helicase associated domain (HA2) VEJY3_06075 PF00271 Helicase conserved C-terminal domain VEJY3_06075 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold VEJY3_06075 PF11898 Domain of unknown function (DUF3418) VEJY3_06075 PF00270 DEAD/DEAH box helicase VEJY3_06085 PF16655 PhoD-like phosphatase, N-terminal domain VEJY3_06085 PF09423 PhoD-like phosphatase VEJY3_06090 PF01259 SAICAR synthetase VEJY3_06110 PF00691 OmpA family VEJY3_06125 PF02913 FAD linked oxidases, C-terminal domain VEJY3_06125 PF01565 FAD binding domain VEJY3_06125 PF13183 4Fe-4S dicluster domain VEJY3_06135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_06135 PF03466 LysR substrate binding domain VEJY3_06140 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase VEJY3_06145 PF13409 Glutathione S-transferase, N-terminal domain VEJY3_06155 PF00491 Arginase family VEJY3_06160 PF01979 Amidohydrolase family VEJY3_06165 PF00392 Bacterial regulatory proteins, gntR family VEJY3_06165 PF07702 UTRA domain VEJY3_06180 PF02824 TGS domain VEJY3_06180 PF03129 Anticodon binding domain VEJY3_06180 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VEJY3_06180 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VEJY3_06185 PF00707 Translation initiation factor IF-3, C-terminal domain VEJY3_06185 PF05198 Translation initiation factor IF-3, N-terminal domain VEJY3_06190 PF01632 Ribosomal protein L35 VEJY3_06195 PF00453 Ribosomal protein L20 VEJY3_06205 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain VEJY3_06205 PF01409 tRNA synthetases class II core domain (F) VEJY3_06210 PF03483 B3/4 domain VEJY3_06210 PF03484 tRNA synthetase B5 domain VEJY3_06210 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain VEJY3_06210 PF01588 Putative tRNA binding domain VEJY3_06210 PF03147 Ferredoxin-fold anticodon binding domain VEJY3_06215 PF00251 Glycosyl hydrolases family 32 N-terminal domain VEJY3_06215 PF08244 Glycosyl hydrolases family 32 C terminal VEJY3_06220 PF00294 pfkB family carbohydrate kinase VEJY3_06230 PF00356 Bacterial regulatory proteins, lacI family VEJY3_06230 PF13407 Periplasmic binding protein domain VEJY3_06240 PF00216 Bacterial DNA-binding protein VEJY3_06250 PF05724 Thiopurine S-methyltransferase (TPMT) VEJY3_06255 PF02222 ATP-grasp domain VEJY3_06260 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VEJY3_06260 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region VEJY3_06265 PF04172 LrgB-like family VEJY3_06270 PF03788 LrgA family VEJY3_06275 PF00929 Exonuclease VEJY3_06275 PF08411 Exonuclease C-terminal VEJY3_06295 PF12826 Helix-hairpin-helix motif VEJY3_06295 PF03120 NAD-dependent DNA ligase OB-fold domain VEJY3_06295 PF01653 NAD-dependent DNA ligase adenylation domain VEJY3_06295 PF00533 BRCA1 C Terminus (BRCT) domain VEJY3_06295 PF03119 NAD-dependent DNA ligase C4 zinc finger domain VEJY3_06310 PF08241 Methyltransferase domain VEJY3_06330 PF13460 NAD(P)H-binding VEJY3_06335 PF01613 Flavin reductase like domain VEJY3_06340 PF02277 Phosphoribosyltransferase VEJY3_06345 PF02654 Cobalamin-5-phosphate synthase VEJY3_06350 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase VEJY3_06365 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family VEJY3_06370 PF01032 FecCD transport family VEJY3_06375 PF00005 ABC transporter VEJY3_06395 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_06395 PF03466 LysR substrate binding domain VEJY3_06405 PF01863 Protein of unknown function DUF45 VEJY3_06410 PF05971 RNA methyltransferase VEJY3_06465 PF00005 ABC transporter VEJY3_06470 PF01032 FecCD transport family VEJY3_06485 PF07687 Peptidase dimerisation domain VEJY3_06485 PF01546 Peptidase family M20/M25/M40 VEJY3_06490 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VEJY3_06495 PF04209 homogentisate 1,2-dioxygenase VEJY3_06505 PF14497 Glutathione S-transferase, C-terminal domain VEJY3_06505 PF02798 Glutathione S-transferase, N-terminal domain VEJY3_06520 PF00474 Sodium:solute symporter family VEJY3_06525 PF06196 Protein of unknown function (DUF997) VEJY3_06535 PF12833 Helix-turn-helix domain VEJY3_06540 PF01810 LysE type translocator VEJY3_06545 PF03330 Lytic transglycolase VEJY3_06545 PF05036 Sporulation related domain VEJY3_06550 PF07969 Amidohydrolase family VEJY3_06555 PF08220 DeoR-like helix-turn-helix domain VEJY3_06555 PF00455 DeoR C terminal sensor domain VEJY3_06570 PF13181 Tetratricopeptide repeat VEJY3_06570 PF07719 Tetratricopeptide repeat VEJY3_06580 PF06039 Malate:quinone oxidoreductase (Mqo) VEJY3_06590 PF14759 Reductase C-terminal VEJY3_06590 PF07992 Pyridine nucleotide-disulphide oxidoreductase VEJY3_06595 PF00106 short chain dehydrogenase VEJY3_06600 PF00355 Rieske [2Fe-2S] domain VEJY3_06605 PF00866 Ring hydroxylating beta subunit VEJY3_06610 PF00848 Ring hydroxylating alpha subunit (catalytic domain) VEJY3_06610 PF00355 Rieske [2Fe-2S] domain VEJY3_06615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_06615 PF03466 LysR substrate binding domain VEJY3_06620 PF01434 Peptidase family M41 VEJY3_06620 PF17862 AAA+ lid domain VEJY3_06620 PF00004 ATPase family associated with various cellular activities (AAA) VEJY3_06730 PF01177 Asp/Glu/Hydantoin racemase VEJY3_06740 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin VEJY3_06745 PF01425 Amidase VEJY3_06755 PF00266 Aminotransferase class-V VEJY3_06760 PF07687 Peptidase dimerisation domain VEJY3_06760 PF01546 Peptidase family M20/M25/M40 VEJY3_06770 PF02417 Chromate transporter VEJY3_06775 PF02417 Chromate transporter VEJY3_06780 PF01494 FAD binding domain VEJY3_06785 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase VEJY3_06790 PF12697 Alpha/beta hydrolase family VEJY3_06795 PF01557 Fumarylacetoacetate (FAA) hydrolase family VEJY3_06800 PF01118 Semialdehyde dehydrogenase, NAD binding domain VEJY3_06800 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation VEJY3_06810 PF00083 Sugar (and other) transporter VEJY3_06815 PF09339 IclR helix-turn-helix domain VEJY3_06815 PF01614 Bacterial transcriptional regulator VEJY3_06825 PF02230 Phospholipase/Carboxylesterase VEJY3_06830 PF00486 Transcriptional regulatory protein, C terminal VEJY3_06830 PF00072 Response regulator receiver domain VEJY3_06835 PF00512 His Kinase A (phospho-acceptor) domain VEJY3_06835 PF00072 Response regulator receiver domain VEJY3_06835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_06835 PF00989 PAS fold VEJY3_06835 PF01627 Hpt domain VEJY3_06835 PF18415 Histidine kinase receptor ArcB trans-membrane domain VEJY3_06845 PF02653 Branched-chain amino acid transport system / permease component VEJY3_06855 PF00005 ABC transporter VEJY3_06855 PF12399 Branched-chain amino acid ATP-binding cassette transporter VEJY3_06860 PF00005 ABC transporter VEJY3_06865 PF01774 UreD urease accessory protein VEJY3_06870 PF00547 Urease, gamma subunit VEJY3_06875 PF00699 Urease beta subunit VEJY3_06880 PF01979 Amidohydrolase family VEJY3_06880 PF00449 Urease alpha-subunit, N-terminal domain VEJY3_06885 PF02814 UreE urease accessory protein, N-terminal domain VEJY3_06885 PF05194 UreE urease accessory protein, C-terminal domain VEJY3_06890 PF01730 UreF VEJY3_06895 PF02492 CobW/HypB/UreG, nucleotide-binding domain VEJY3_06905 PF00939 Sodium:sulfate symporter transmembrane region VEJY3_06910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_06910 PF00512 His Kinase A (phospho-acceptor) domain VEJY3_06910 PF00497 Bacterial extracellular solute-binding proteins, family 3 VEJY3_06930 PF03222 Tryptophan/tyrosine permease family VEJY3_06935 PF00072 Response regulator receiver domain VEJY3_06935 PF01966 HD domain VEJY3_06950 PF00664 ABC transporter transmembrane region VEJY3_06950 PF00005 ABC transporter VEJY3_06955 PF00005 ABC transporter VEJY3_06955 PF00664 ABC transporter transmembrane region VEJY3_06965 PF00180 Isocitrate/isopropylmalate dehydrogenase VEJY3_06970 PF00175 Oxidoreductase NAD-binding domain VEJY3_06970 PF00970 Oxidoreductase FAD-binding domain VEJY3_06970 PF00111 2Fe-2S iron-sulfur cluster binding domain VEJY3_06975 PF00171 Aldehyde dehydrogenase family VEJY3_06980 PF00355 Rieske [2Fe-2S] domain VEJY3_06980 PF00848 Ring hydroxylating alpha subunit (catalytic domain) VEJY3_06985 PF02028 BCCT, betaine/carnitine/choline family transporter VEJY3_07000 PF00012 Hsp70 protein VEJY3_07005 PF00012 Hsp70 protein VEJY3_07040 PF02525 Flavodoxin-like fold VEJY3_07045 PF00271 Helicase conserved C-terminal domain VEJY3_07045 PF11898 Domain of unknown function (DUF3418) VEJY3_07045 PF00270 DEAD/DEAH box helicase VEJY3_07045 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold VEJY3_07045 PF04408 Helicase associated domain (HA2) VEJY3_07060 PF02028 BCCT, betaine/carnitine/choline family transporter VEJY3_07070 PF01068 ATP dependent DNA ligase domain VEJY3_07070 PF14743 DNA ligase OB-like domain VEJY3_07080 PF01554 MatE VEJY3_07085 PF00677 Lumazine binding domain VEJY3_07100 PF00072 Response regulator receiver domain VEJY3_07100 PF01339 CheB methylesterase VEJY3_07105 PF00990 Diguanylate cyclase, GGDEF domain VEJY3_07105 PF05230 MASE2 domain VEJY3_07115 PF00877 NlpC/P60 family VEJY3_07120 PF00672 HAMP domain VEJY3_07120 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VEJY3_07120 PF12729 Four helix bundle sensory module for signal transduction VEJY3_07140 PF00480 ROK family VEJY3_07155 PF00994 Probable molybdopterin binding domain VEJY3_07155 PF03453 MoeA N-terminal region (domain I and II) VEJY3_07155 PF03454 MoeA C-terminal region (domain IV) VEJY3_07160 PF12804 MobA-like NTP transferase domain VEJY3_07165 PF08402 TOBE domain VEJY3_07165 PF00005 ABC transporter VEJY3_07170 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_07175 PF12849 PBP superfamily domain VEJY3_07180 PF00072 Response regulator receiver domain VEJY3_07180 PF00158 Sigma-54 interaction domain VEJY3_07180 PF02954 Bacterial regulatory protein, Fis family VEJY3_07185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_07185 PF00512 His Kinase A (phospho-acceptor) domain VEJY3_07190 PF12848 ABC transporter VEJY3_07190 PF00005 ABC transporter VEJY3_07200 PF02634 FdhD/NarQ family VEJY3_07230 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VEJY3_07230 PF01568 Molydopterin dinucleotide binding domain VEJY3_07230 PF00384 Molybdopterin oxidoreductase VEJY3_07235 PF13247 4Fe-4S dicluster domain VEJY3_07250 PF12464 Maltose acetyltransferase VEJY3_07250 PF00132 Bacterial transferase hexapeptide (six repeats) VEJY3_07265 PF01554 MatE VEJY3_07270 PF00909 Ammonium Transporter Family VEJY3_07280 PF02146 Sir2 family VEJY3_07285 PF13416 Bacterial extracellular solute-binding protein VEJY3_07290 PF13416 Bacterial extracellular solute-binding protein VEJY3_07295 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_07300 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_07305 PF08402 TOBE domain VEJY3_07305 PF00005 ABC transporter VEJY3_07320 PF01171 PP-loop family VEJY3_07325 PF00582 Universal stress protein family VEJY3_07330 PF13545 Crp-like helix-turn-helix domain VEJY3_07330 PF00027 Cyclic nucleotide-binding domain VEJY3_07345 PF00403 Heavy-metal-associated domain VEJY3_07355 PF14715 N-terminal domain of cytochrome oxidase-cbb3, FixP VEJY3_07355 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VEJY3_07370 PF00115 Cytochrome C and Quinol oxidase polypeptide I VEJY3_07385 PF09308 LuxQ, periplasmic VEJY3_07385 PF00512 His Kinase A (phospho-acceptor) domain VEJY3_07385 PF00072 Response regulator receiver domain VEJY3_07385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_07515 PF08000 Bacterial PH domain VEJY3_07550 PF17414 MatP C-terminal ribbon-helix-helix domain VEJY3_07550 PF06303 MatP N-terminal domain VEJY3_07555 PF05362 Lon protease (S16) C-terminal proteolytic domain VEJY3_07555 PF13654 AAA domain VEJY3_07560 PF07977 FabA-like domain VEJY3_07565 PF04957 Ribosome modulation factor VEJY3_07585 PF10672 S-adenosylmethionine-dependent methyltransferase VEJY3_07585 PF02926 THUMP domain VEJY3_07585 PF01170 Putative RNA methylase family UPF0020 VEJY3_07590 PF07126 Cell-division protein ZapC VEJY3_07595 PF01180 Dihydroorotate dehydrogenase VEJY3_07600 PF05088 Bacterial NAD-glutamate dehydrogenase VEJY3_07610 PF11940 Domain of unknown function (DUF3458) Ig-like fold VEJY3_07610 PF17432 Domain of unknown function (DUF3458_C) ARM repeats VEJY3_07610 PF01433 Peptidase family M1 domain VEJY3_07620 PF17804 Tail specific protease N-terminal domain VEJY3_07620 PF03572 Peptidase family S41 VEJY3_07620 PF00595 PDZ domain VEJY3_07620 PF11818 C-terminal domain of tail specific protease (DUF3340) VEJY3_07625 PF04352 ProQ/FINO family VEJY3_07625 PF17516 ProQ C-terminal domain VEJY3_07630 PF13185 GAF domain VEJY3_07635 PF00664 ABC transporter transmembrane region VEJY3_07635 PF00005 ABC transporter VEJY3_07640 PF04403 Paraquat-inducible protein A VEJY3_07645 PF02470 MlaD protein VEJY3_07650 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF VEJY3_07650 PF01189 16S rRNA methyltransferase RsmB/F VEJY3_07650 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF VEJY3_07670 PF00793 DAHP synthetase I family VEJY3_07675 PF04461 Protein of unknown function (DUF520) VEJY3_07680 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VEJY3_07680 PF14824 Sirohaem biosynthesis protein central VEJY3_07680 PF10414 Sirohaem synthase dimerisation region VEJY3_07690 PF00497 Bacterial extracellular solute-binding proteins, family 3 VEJY3_07695 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_07700 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_07705 PF00005 ABC transporter VEJY3_07710 PF01027 Inhibitor of apoptosis-promoting Bax1 VEJY3_07720 PF04358 DsrC like protein VEJY3_07725 PF00708 Acylphosphatase VEJY3_07730 PF17785 PUA-like domain VEJY3_07730 PF10672 S-adenosylmethionine-dependent methyltransferase VEJY3_07750 PF00691 OmpA family VEJY3_07760 PF00990 Diguanylate cyclase, GGDEF domain VEJY3_07760 PF17158 Membrane-associated sensor, integral membrane domain VEJY3_07765 PF06508 Queuosine biosynthesis protein QueC VEJY3_07770 PF04055 Radical SAM superfamily VEJY3_07785 PF12464 Maltose acetyltransferase VEJY3_07785 PF14602 Hexapeptide repeat of succinyl-transferase VEJY3_07805 PF13426 PAS domain VEJY3_07805 PF00990 Diguanylate cyclase, GGDEF domain VEJY3_07805 PF00563 EAL domain VEJY3_07810 PF07687 Peptidase dimerisation domain VEJY3_07810 PF01546 Peptidase family M20/M25/M40 VEJY3_07820 PF00593 TonB dependent receptor VEJY3_07820 PF07715 TonB-dependent Receptor Plug Domain VEJY3_07825 PF00293 NUDIX domain VEJY3_07835 PF13193 AMP-binding enzyme C-terminal domain VEJY3_07835 PF00501 AMP-binding enzyme VEJY3_07835 PF16177 Acetyl-coenzyme A synthetase N-terminus VEJY3_07840 PF04303 PrpF protein VEJY3_07845 PF00330 Aconitase family (aconitate hydratase) VEJY3_07845 PF00694 Aconitase C-terminal domain VEJY3_07850 PF00285 Citrate synthase, C-terminal domain VEJY3_07880 PF01970 Tripartite tricarboxylate transporter TctA family VEJY3_07885 PF01925 Sulfite exporter TauE/SafE VEJY3_07890 PF16868 NMT1-like family VEJY3_07895 PF00171 Aldehyde dehydrogenase family VEJY3_07900 PF02954 Bacterial regulatory protein, Fis family VEJY3_07900 PF01590 GAF domain VEJY3_07900 PF00158 Sigma-54 interaction domain VEJY3_07915 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VEJY3_07915 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain VEJY3_07920 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase VEJY3_07925 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain VEJY3_07925 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain VEJY3_07930 PF12833 Helix-turn-helix domain VEJY3_07935 PF07715 TonB-dependent Receptor Plug Domain VEJY3_07935 PF00593 TonB dependent receptor VEJY3_07940 PF12431 Transcriptional regulator VEJY3_07940 PF00072 Response regulator receiver domain VEJY3_07945 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain VEJY3_07945 PF17203 Single cache domain 3 VEJY3_07945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_07945 PF00989 PAS fold VEJY3_07960 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VEJY3_07975 PF13840 ACT domain VEJY3_07975 PF00696 Amino acid kinase family VEJY3_07980 PF06339 Ectoine synthase VEJY3_07985 PF00202 Aminotransferase class-III VEJY3_07990 PF00583 Acetyltransferase (GNAT) family VEJY3_07995 PF00571 CBS domain VEJY3_07995 PF00005 ABC transporter VEJY3_08000 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_08005 PF04069 Substrate binding domain of ABC-type glycine betaine transport system VEJY3_08015 PF00501 AMP-binding enzyme VEJY3_08025 PF00106 short chain dehydrogenase VEJY3_08035 PF00072 Response regulator receiver domain VEJY3_08035 PF00486 Transcriptional regulatory protein, C terminal VEJY3_08040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_08040 PF00512 His Kinase A (phospho-acceptor) domain VEJY3_08040 PF08521 Two-component sensor kinase N-terminal VEJY3_08045 PF00884 Sulfatase VEJY3_08065 PF05922 Peptidase inhibitor I9 VEJY3_08065 PF00082 Subtilase family VEJY3_08070 PF03466 LysR substrate binding domain VEJY3_08070 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_08075 PF00881 Nitroreductase family VEJY3_08120 PF00535 Glycosyl transferase family 2 VEJY3_08150 PF01235 Sodium:alanine symporter family VEJY3_08165 PF00296 Luciferase-like monooxygenase VEJY3_08170 PF01810 LysE type translocator VEJY3_08175 PF02074 Carboxypeptidase Taq (M32) metallopeptidase VEJY3_08180 PF08546 Ketopantoate reductase PanE/ApbA C terminal VEJY3_08180 PF02558 Ketopantoate reductase PanE/ApbA VEJY3_08185 PF04632 Fusaric acid resistance protein family VEJY3_08190 PF13533 Biotin-lipoyl like VEJY3_08200 PF03279 Bacterial lipid A biosynthesis acyltransferase VEJY3_08210 PF04204 Homoserine O-succinyltransferase VEJY3_08220 PF00512 His Kinase A (phospho-acceptor) domain VEJY3_08220 PF00072 Response regulator receiver domain VEJY3_08220 PF00672 HAMP domain VEJY3_08220 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VEJY3_08220 PF01627 Hpt domain VEJY3_08220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_08245 PF04237 YjbR VEJY3_08250 PF01047 MarR family VEJY3_08255 PF00892 EamA-like transporter family VEJY3_08260 PF00202 Aminotransferase class-III VEJY3_08265 PF00171 Aldehyde dehydrogenase family VEJY3_08270 PF04371 Porphyromonas-type peptidyl-arginine deiminase VEJY3_08275 PF00795 Carbon-nitrogen hydrolase VEJY3_08280 PF01266 FAD dependent oxidoreductase VEJY3_08285 PF00171 Aldehyde dehydrogenase family VEJY3_08290 PF01381 Helix-turn-helix VEJY3_08290 PF07883 Cupin domain VEJY3_08295 PF07722 Peptidase C26 VEJY3_08300 PF00120 Glutamine synthetase, catalytic domain VEJY3_08305 PF03553 Na+/H+ antiporter family VEJY3_08325 PF03831 PhnA domain VEJY3_08325 PF08274 PhnA Zinc-Ribbon VEJY3_08330 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VEJY3_08330 PF01411 tRNA synthetases class II (A) VEJY3_08360 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VEJY3_08390 PF01177 Asp/Glu/Hydantoin racemase VEJY3_08405 PF00440 Bacterial regulatory proteins, tetR family VEJY3_08405 PF17754 MftR C-terminal domain VEJY3_08415 PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) VEJY3_08440 PF00171 Aldehyde dehydrogenase family VEJY3_08445 PF00936 BMC domain VEJY3_08450 PF00936 BMC domain VEJY3_08460 PF13375 RnfC Barrel sandwich hybrid domain VEJY3_08460 PF13237 4Fe-4S dicluster domain VEJY3_08460 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit VEJY3_08460 PF10531 SLBB domain VEJY3_08465 PF00871 Acetokinase family VEJY3_08470 PF03928 Haem-degrading VEJY3_08475 PF03319 Ethanolamine utilisation protein EutN/carboxysome VEJY3_08490 PF06130 Phosphate propanoyltransferase VEJY3_08495 PF00465 Iron-containing alcohol dehydrogenase VEJY3_08500 PF00230 Major intrinsic protein VEJY3_08505 PF00936 BMC domain VEJY3_08510 PF00438 S-adenosylmethionine synthetase, N-terminal domain VEJY3_08510 PF02773 S-adenosylmethionine synthetase, C-terminal domain VEJY3_08510 PF02772 S-adenosylmethionine synthetase, central domain VEJY3_08515 PF12833 Helix-turn-helix domain VEJY3_08520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_08520 PF00672 HAMP domain VEJY3_08520 PF02743 Cache domain VEJY3_08520 PF06580 Histidine kinase VEJY3_08535 PF00728 Glycosyl hydrolase family 20, catalytic domain VEJY3_08535 PF03174 Chitobiase/beta-hexosaminidase C-terminal domain VEJY3_08535 PF03173 Putative carbohydrate binding domain VEJY3_08535 PF02838 Glycosyl hydrolase family 20, domain 2 VEJY3_08540 PF00072 Response regulator receiver domain VEJY3_08540 PF00486 Transcriptional regulatory protein, C terminal VEJY3_08545 PF00512 His Kinase A (phospho-acceptor) domain VEJY3_08545 PF00672 HAMP domain VEJY3_08545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_08560 PF00171 Aldehyde dehydrogenase family VEJY3_08570 PF00465 Iron-containing alcohol dehydrogenase VEJY3_08580 PF02142 MGS-like domain VEJY3_08585 PF04962 KduI/IolB family VEJY3_08590 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VEJY3_08590 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VEJY3_08595 PF00083 Sugar (and other) transporter VEJY3_08600 PF01261 Xylose isomerase-like TIM barrel VEJY3_08605 PF00356 Bacterial regulatory proteins, lacI family VEJY3_08610 PF01261 Xylose isomerase-like TIM barrel VEJY3_08615 PF00294 pfkB family carbohydrate kinase VEJY3_08620 PF00171 Aldehyde dehydrogenase family VEJY3_08620 PF00465 Iron-containing alcohol dehydrogenase VEJY3_08625 PF00205 Thiamine pyrophosphate enzyme, central domain VEJY3_08625 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VEJY3_08625 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VEJY3_08630 PF00294 pfkB family carbohydrate kinase VEJY3_08645 PF13417 Glutathione S-transferase, N-terminal domain VEJY3_08645 PF04399 Glutaredoxin 2, C terminal domain VEJY3_08660 PF01261 Xylose isomerase-like TIM barrel VEJY3_08665 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VEJY3_08665 PF00356 Bacterial regulatory proteins, lacI family VEJY3_08670 PF00083 Sugar (and other) transporter VEJY3_08675 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VEJY3_08675 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VEJY3_08680 PF01261 Xylose isomerase-like TIM barrel VEJY3_08695 PF01740 STAS domain VEJY3_08700 PF01389 OmpA-like transmembrane domain VEJY3_08700 PF00691 OmpA family VEJY3_08720 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VEJY3_08720 PF00672 HAMP domain VEJY3_08720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_08720 PF00512 His Kinase A (phospho-acceptor) domain VEJY3_08720 PF01627 Hpt domain VEJY3_08720 PF00072 Response regulator receiver domain VEJY3_08725 PF00072 Response regulator receiver domain VEJY3_08725 PF02954 Bacterial regulatory protein, Fis family VEJY3_08725 PF00158 Sigma-54 interaction domain VEJY3_08765 PF02706 Chain length determinant protein VEJY3_08765 PF13807 G-rich domain on putative tyrosine kinase VEJY3_08765 PF13614 AAA domain VEJY3_08770 PF13439 Glycosyltransferase Family 4 VEJY3_08770 PF00534 Glycosyl transferases group 1 VEJY3_08780 PF02397 Bacterial sugar transferase VEJY3_08795 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain VEJY3_08795 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain VEJY3_08795 PF02278 Polysaccharide lyase family 8, super-sandwich domain VEJY3_08925 PF00465 Iron-containing alcohol dehydrogenase VEJY3_08930 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VEJY3_08930 PF00356 Bacterial regulatory proteins, lacI family VEJY3_08935 PF00294 pfkB family carbohydrate kinase VEJY3_08940 PF00571 CBS domain VEJY3_08940 PF01380 SIS domain VEJY3_08945 PF03928 Haem-degrading VEJY3_08950 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VEJY3_08950 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VEJY3_08955 PF00381 PTS HPr component phosphorylation site VEJY3_08955 PF00391 PEP-utilising enzyme, mobile domain VEJY3_08955 PF05524 PEP-utilising enzyme, N-terminal VEJY3_08955 PF02896 PEP-utilising enzyme, TIM barrel domain VEJY3_08955 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VEJY3_08965 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VEJY3_08975 PF04055 Radical SAM superfamily VEJY3_08985 PF00923 Transaldolase/Fructose-6-phosphate aldolase VEJY3_08990 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VEJY3_08995 PF12833 Helix-turn-helix domain VEJY3_09005 PF01238 Phosphomannose isomerase type I VEJY3_09035 PF00107 Zinc-binding dehydrogenase VEJY3_09035 PF08240 Alcohol dehydrogenase GroES-like domain VEJY3_09040 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VEJY3_09045 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VEJY3_09050 PF13737 Transposase DDE domain VEJY3_09060 PF00248 Aldo/keto reductase family VEJY3_09065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_09065 PF03466 LysR substrate binding domain VEJY3_09070 PF00296 Luciferase-like monooxygenase VEJY3_09075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_09075 PF03466 LysR substrate binding domain VEJY3_09080 PF07690 Major Facilitator Superfamily VEJY3_09085 PF00106 short chain dehydrogenase VEJY3_09090 PF00438 S-adenosylmethionine synthetase, N-terminal domain VEJY3_09090 PF02773 S-adenosylmethionine synthetase, C-terminal domain VEJY3_09090 PF02772 S-adenosylmethionine synthetase, central domain VEJY3_09105 PF00392 Bacterial regulatory proteins, gntR family VEJY3_09105 PF07702 UTRA domain VEJY3_09110 PF02378 Phosphotransferase system, EIIC VEJY3_09110 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VEJY3_09110 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VEJY3_09115 PF01074 Glycosyl hydrolases family 38 N-terminal domain VEJY3_09115 PF09261 Alpha mannosidase middle domain VEJY3_09115 PF07748 Glycosyl hydrolases family 38 C-terminal domain VEJY3_09120 PF02595 Glycerate kinase family VEJY3_09125 PF01238 Phosphomannose isomerase type I VEJY3_09130 PF00356 Bacterial regulatory proteins, lacI family VEJY3_09135 PF16875 Glycosyl hydrolase family 36 N-terminal domain VEJY3_09135 PF16874 Glycosyl hydrolase family 36 C-terminal domain VEJY3_09140 PF00474 Sodium:solute symporter family VEJY3_09145 PF17992 Agarase CBM like domain VEJY3_09145 PF02449 Beta-galactosidase VEJY3_09150 PF17992 Agarase CBM like domain VEJY3_09155 PF17992 Agarase CBM like domain VEJY3_09155 PF02449 Beta-galactosidase VEJY3_09160 PF02264 LamB porin VEJY3_09170 PF16355 Domain of unknown function (DUF4982) VEJY3_09170 PF00703 Glycosyl hydrolases family 2 VEJY3_09170 PF02836 Glycosyl hydrolases family 2, TIM barrel domain VEJY3_09170 PF18565 Glycoside hydrolase family 2 C-terminal domain 5 VEJY3_09170 PF02837 Glycosyl hydrolases family 2, sugar binding domain VEJY3_09185 PF00083 Sugar (and other) transporter VEJY3_09215 PF02371 Transposase IS116/IS110/IS902 family VEJY3_09215 PF01548 Transposase VEJY3_09220 PF02371 Transposase IS116/IS110/IS902 family VEJY3_09220 PF01548 Transposase VEJY3_09230 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VEJY3_09240 PF00171 Aldehyde dehydrogenase family VEJY3_09245 PF00392 Bacterial regulatory proteins, gntR family VEJY3_09245 PF07729 FCD domain VEJY3_09250 PF17912 MalK OB fold domain VEJY3_09250 PF00005 ABC transporter VEJY3_09260 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_09285 PF13276 HTH-like domain VEJY3_09285 PF00665 Integrase core domain VEJY3_09285 PF13333 Integrase core domain VEJY3_09290 PF01527 Transposase VEJY3_09300 PF03952 Enolase, N-terminal domain VEJY3_09300 PF00113 Enolase, C-terminal TIM barrel domain VEJY3_09310 PF00171 Aldehyde dehydrogenase family VEJY3_09320 PF00474 Sodium:solute symporter family VEJY3_09325 PF01116 Fructose-bisphosphate aldolase class-II VEJY3_09330 PF00294 pfkB family carbohydrate kinase VEJY3_09345 PF01554 MatE VEJY3_09350 PF01872 RibD C-terminal domain VEJY3_09365 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VEJY3_09370 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain VEJY3_09370 PF13378 Enolase C-terminal domain-like VEJY3_09375 PF01081 KDPG and KHG aldolase VEJY3_09385 PF08125 Mannitol dehydrogenase C-terminal domain VEJY3_09385 PF01232 Mannitol dehydrogenase Rossmann domain VEJY3_09390 PF08240 Alcohol dehydrogenase GroES-like domain VEJY3_09390 PF00107 Zinc-binding dehydrogenase VEJY3_09395 PF02615 Malate/L-lactate dehydrogenase VEJY3_09400 PF00672 HAMP domain VEJY3_09400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VEJY3_09405 PF13276 HTH-like domain VEJY3_09405 PF13683 Integrase core domain VEJY3_09410 PF13683 Integrase core domain VEJY3_09410 PF13276 HTH-like domain VEJY3_09415 PF04074 YhcH/YjgK/YiaL VEJY3_09420 PF00392 Bacterial regulatory proteins, gntR family VEJY3_09420 PF07729 FCD domain VEJY3_09425 PF17992 Agarase CBM like domain VEJY3_09425 PF02449 Beta-galactosidase VEJY3_09430 PF00665 Integrase core domain VEJY3_09450 PF00356 Bacterial regulatory proteins, lacI family VEJY3_09455 PF01263 Aldose 1-epimerase VEJY3_09460 PF00288 GHMP kinases N terminal domain VEJY3_09460 PF08544 GHMP kinases C terminal VEJY3_09460 PF10509 Galactokinase galactose-binding signature VEJY3_09475 PF16363 GDP-mannose 4,6 dehydratase VEJY3_09485 PF01966 HD domain VEJY3_09530 PF00474 Sodium:solute symporter family VEJY3_09535 PF16875 Glycosyl hydrolase family 36 N-terminal domain VEJY3_09535 PF16874 Glycosyl hydrolase family 36 C-terminal domain VEJY3_09540 PF00356 Bacterial regulatory proteins, lacI family VEJY3_09575 PF13737 Transposase DDE domain VEJY3_09580 PF13737 Transposase DDE domain VEJY3_09585 PF02371 Transposase IS116/IS110/IS902 family VEJY3_09585 PF01548 Transposase VEJY3_09675 PF13495 Phage integrase, N-terminal SAM-like domain VEJY3_09675 PF00589 Phage integrase family VEJY3_09680 PF01757 Acyltransferase family VEJY3_09750 PF00574 Clp protease VEJY3_09765 PF02413 Caudovirales tail fibre assembly protein, lambda gpK VEJY3_09770 PF07471 Phage DNA packaging protein Nu1 VEJY3_09825 PF06147 Protein of unknown function (DUF968) VEJY3_09850 PF03354 Phage Terminase VEJY3_09865 PF00717 Peptidase S24-like VEJY3_09865 PF01381 Helix-turn-helix VEJY3_09880 PF10065 Uncharacterized conserved protein (DUF2303) VEJY3_09920 PF12167 Arm DNA-binding domain VEJY3_09920 PF00589 Phage integrase family VEJY3_09940 PF13302 Acetyltransferase (GNAT) domain VEJY3_09945 PF00158 Sigma-54 interaction domain VEJY3_09945 PF18024 Helix-turn-helix domain VEJY3_09950 PF05128 Domain of unknown function (DUF697) VEJY3_09955 PF04317 YcjX-like family, DUF463 VEJY3_09970 PF04715 Anthranilate synthase component I, N terminal region VEJY3_09970 PF00425 chorismate binding enzyme VEJY3_09975 PF00293 NUDIX domain VEJY3_09980 PF03222 Tryptophan/tyrosine permease family VEJY3_09985 PF03313 Serine dehydratase alpha chain VEJY3_09985 PF03315 Serine dehydratase beta chain VEJY3_09990 PF01242 6-pyruvoyl tetrahydropterin synthase VEJY3_09995 PF00152 tRNA synthetases class II (D, K and N) VEJY3_09995 PF01336 OB-fold nucleic acid binding domain VEJY3_10005 PF00392 Bacterial regulatory proteins, gntR family VEJY3_10005 PF00155 Aminotransferase class I and II VEJY3_10015 PF00155 Aminotransferase class I and II VEJY3_10030 PF07733 Bacterial DNA polymerase III alpha NTPase domain VEJY3_10030 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VEJY3_10030 PF14579 Helix-hairpin-helix motif VEJY3_10030 PF00929 Exonuclease VEJY3_10030 PF02811 PHP domain VEJY3_10035 PF00672 HAMP domain VEJY3_10035 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VEJY3_10040 PF02028 BCCT, betaine/carnitine/choline family transporter VEJY3_10045 PF01047 MarR family VEJY3_10050 PF00196 Bacterial regulatory proteins, luxR family VEJY3_10050 PF00072 Response regulator receiver domain VEJY3_10055 PF17200 Single Cache domain 2 VEJY3_10055 PF07730 Histidine kinase VEJY3_10060 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VEJY3_10070 PF03480 Bacterial extracellular solute-binding protein, family 7 VEJY3_10085 PF00753 Metallo-beta-lactamase superfamily VEJY3_10090 PF05951 Bacterial protein of unknown function (DUF882) VEJY3_10095 PF03734 L,D-transpeptidase catalytic domain VEJY3_10095 PF01471 Putative peptidoglycan binding domain VEJY3_10120 PF00925 GTP cyclohydrolase II VEJY3_10125 PF03989 DNA gyrase C-terminal domain, beta-propeller VEJY3_10125 PF00521 DNA gyrase/topoisomerase IV, subunit A VEJY3_10135 PF02867 Ribonucleotide reductase, barrel domain VEJY3_10135 PF03477 ATP cone domain VEJY3_10135 PF00317 Ribonucleotide reductase, all-alpha domain VEJY3_10140 PF00268 Ribonucleotide reductase, small chain VEJY3_10145 PF00175 Oxidoreductase NAD-binding domain VEJY3_10145 PF00111 2Fe-2S iron-sulfur cluster binding domain VEJY3_10145 PF00970 Oxidoreductase FAD-binding domain VEJY3_10150 PF16363 GDP-mannose 4,6 dehydratase VEJY3_10155 PF12706 Beta-lactamase superfamily domain VEJY3_10165 PF00994 Probable molybdopterin binding domain VEJY3_10180 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain VEJY3_10185 PF16653 Saccharopine dehydrogenase C-terminal domain VEJY3_10185 PF03435 Saccharopine dehydrogenase NADP binding domain VEJY3_10190 PF00202 Aminotransferase class-III VEJY3_10195 PF01066 CDP-alcohol phosphatidyltransferase VEJY3_10200 PF01541 GIY-YIG catalytic domain VEJY3_10200 PF02151 UvrB/uvrC motif VEJY3_10200 PF08459 UvrC Helix-hairpin-helix N-terminal VEJY3_10205 PF00072 Response regulator receiver domain VEJY3_10205 PF00196 Bacterial regulatory proteins, luxR family VEJY3_10210 PF00136 DNA polymerase family B VEJY3_10210 PF03104 DNA polymerase family B, exonuclease domain VEJY3_10220 PF01132 Elongation factor P (EF-P) OB domain VEJY3_10220 PF08207 Elongation factor P (EF-P) KOW-like domain VEJY3_10220 PF09285 Elongation factor P, C-terminal VEJY3_10225 PF04269 Protein of unknown function, DUF440 VEJY3_10230 PF01479 S4 domain VEJY3_10230 PF00849 RNA pseudouridylate synthase VEJY3_10240 PF01300 Telomere recombination VEJY3_10245 PF02811 PHP domain VEJY3_10250 PF08056 Tryptophan operon leader peptide VEJY3_10255 PF04715 Anthranilate synthase component I, N terminal region VEJY3_10255 PF00425 chorismate binding enzyme VEJY3_10260 PF00117 Glutamine amidotransferase class-I VEJY3_10265 PF00591 Glycosyl transferase family, a/b domain VEJY3_10265 PF02885 Glycosyl transferase family, helical bundle domain VEJY3_10270 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase VEJY3_10270 PF00218 Indole-3-glycerol phosphate synthase VEJY3_10275 PF00291 Pyridoxal-phosphate dependent enzyme VEJY3_10280 PF00290 Tryptophan synthase alpha chain VEJY3_10285 PF00027 Cyclic nucleotide-binding domain VEJY3_10285 PF13545 Crp-like helix-turn-helix domain VEJY3_10290 PF13193 AMP-binding enzyme C-terminal domain VEJY3_10290 PF00501 AMP-binding enzyme VEJY3_10295 PF00375 Sodium:dicarboxylate symporter family VEJY3_10305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_10305 PF00072 Response regulator receiver domain VEJY3_10315 PF04279 Intracellular septation protein A VEJY3_10320 PF03061 Thioesterase superfamily VEJY3_10325 PF03795 YCII-related domain VEJY3_10335 PF01717 Cobalamin-independent synthase, Catalytic domain VEJY3_10335 PF08267 Cobalamin-independent synthase, N-terminal domain VEJY3_10340 PF03466 LysR substrate binding domain VEJY3_10340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_10355 PF08448 PAS fold VEJY3_10355 PF00990 Diguanylate cyclase, GGDEF domain VEJY3_10355 PF08447 PAS fold VEJY3_10355 PF00563 EAL domain VEJY3_10360 PF08497 Radical SAM N-terminal VEJY3_10360 PF04055 Radical SAM superfamily VEJY3_10360 PF11842 Domain of unknown function (DUF3362) VEJY3_10365 PF00486 Transcriptional regulatory protein, C terminal VEJY3_10365 PF00072 Response regulator receiver domain VEJY3_10370 PF00512 His Kinase A (phospho-acceptor) domain VEJY3_10370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_10370 PF00672 HAMP domain VEJY3_10385 PF03466 LysR substrate binding domain VEJY3_10385 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_10390 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VEJY3_10390 PF00529 HlyD membrane-fusion protein of T1SS VEJY3_10405 PF00085 Thioredoxin VEJY3_10410 PF11412 Disulphide bond corrector protein DsbC VEJY3_10410 PF02683 Cytochrome C biogenesis protein transmembrane region VEJY3_10420 PF08443 RimK-like ATP-grasp domain VEJY3_10420 PF18030 RimK PreATP-grasp domain VEJY3_10425 PF12706 Beta-lactamase superfamily domain VEJY3_10425 PF17770 Ribonuclease J C-terminal domain VEJY3_10425 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain VEJY3_10430 PF00990 Diguanylate cyclase, GGDEF domain VEJY3_10430 PF00072 Response regulator receiver domain VEJY3_10435 PF14403 Circularly permuted ATP-grasp type 2 VEJY3_10450 PF14403 Circularly permuted ATP-grasp type 2 VEJY3_10450 PF04168 A predicted alpha-helical domain with a conserved ER motif. VEJY3_10455 PF08379 Bacterial transglutaminase-like N-terminal region VEJY3_10455 PF01841 Transglutaminase-like superfamily VEJY3_10460 PF00072 Response regulator receiver domain VEJY3_10460 PF00196 Bacterial regulatory proteins, luxR family VEJY3_10465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_10465 PF00512 His Kinase A (phospho-acceptor) domain VEJY3_10470 PF13247 4Fe-4S dicluster domain VEJY3_10475 PF03916 Polysulphide reductase, NrfD VEJY3_10480 PF01568 Molydopterin dinucleotide binding domain VEJY3_10480 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VEJY3_10480 PF00384 Molybdopterin oxidoreductase VEJY3_10485 PF00034 Cytochrome c VEJY3_10490 PF13442 Cytochrome C oxidase, cbb3-type, subunit III VEJY3_10495 PF04403 Paraquat-inducible protein A VEJY3_10500 PF02470 MlaD protein VEJY3_10505 PF03886 ABC-type transport auxiliary lipoprotein component VEJY3_10510 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase VEJY3_10520 PF00535 Glycosyl transferase family 2 VEJY3_10525 PF01370 NAD dependent epimerase/dehydratase family VEJY3_10535 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VEJY3_10540 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family VEJY3_10545 PF18073 Rubredoxin metal binding domain VEJY3_10550 PF06305 Lipopolysaccharide assembly protein A domain VEJY3_10555 PF00216 Bacterial DNA-binding protein VEJY3_10560 PF00575 S1 RNA binding domain VEJY3_10565 PF02224 Cytidylate kinase VEJY3_10570 PF08496 Peptidase family S49 N-terminal VEJY3_10570 PF01343 Peptidase family S49 VEJY3_10575 PF00106 short chain dehydrogenase VEJY3_10590 PF07733 Bacterial DNA polymerase III alpha NTPase domain VEJY3_10590 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VEJY3_10590 PF02811 PHP domain VEJY3_10590 PF14579 Helix-hairpin-helix motif VEJY3_10590 PF01336 OB-fold nucleic acid binding domain VEJY3_10595 PF00480 ROK family VEJY3_10600 PF02887 Pyruvate kinase, alpha/beta domain VEJY3_10600 PF00224 Pyruvate kinase, barrel domain VEJY3_10605 PF01734 Patatin-like phospholipase VEJY3_10620 PF00209 Sodium:neurotransmitter symporter family VEJY3_10635 PF00367 phosphotransferase system, EIIB VEJY3_10635 PF02378 Phosphotransferase system, EIIC VEJY3_10645 PF02378 Phosphotransferase system, EIIC VEJY3_10645 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VEJY3_10645 PF00367 phosphotransferase system, EIIB VEJY3_10650 PF01026 TatD related DNase VEJY3_10655 PF12169 DNA polymerase III subunits gamma and tau domain III VEJY3_10660 PF02223 Thymidylate kinase VEJY3_10665 PF02618 YceG-like family VEJY3_10670 PF01063 Amino-transferase class IV VEJY3_10675 PF02801 Beta-ketoacyl synthase, C-terminal domain VEJY3_10675 PF00109 Beta-ketoacyl synthase, N-terminal domain VEJY3_10680 PF00550 Phosphopantetheine attachment site VEJY3_10690 PF00698 Acyl transferase domain VEJY3_10695 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VEJY3_10695 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VEJY3_10700 PF02504 Fatty acid synthesis protein VEJY3_10705 PF01783 Ribosomal L32p protein family VEJY3_10710 PF02620 Large ribosomal RNA subunit accumulation protein YceD VEJY3_10715 PF02545 Maf-like protein VEJY3_10720 PF00849 RNA pseudouridylate synthase VEJY3_10720 PF01479 S4 domain VEJY3_10725 PF00575 S1 RNA binding domain VEJY3_10725 PF10150 Ribonuclease E/G family VEJY3_10725 PF12111 Polyribonucleotide phosphorylase C terminal VEJY3_10730 PF00916 Sulfate permease family VEJY3_10730 PF01740 STAS domain VEJY3_10735 PF01451 Low molecular weight phosphotyrosine protein phosphatase VEJY3_10740 PF12557 Cob(I)alamin adenosyltransferase N terminal VEJY3_10740 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP VEJY3_10750 PF00485 Phosphoribulokinase / Uridine kinase family VEJY3_10755 PF10609 NUBPL iron-transfer P-loop NTPase VEJY3_10760 PF01588 Putative tRNA binding domain VEJY3_10760 PF09334 tRNA synthetases class I (M) VEJY3_10770 PF07840 FadR C-terminal domain VEJY3_10770 PF00392 Bacterial regulatory proteins, gntR family VEJY3_10775 PF06450 Bacterial Na+/H+ antiporter B (NhaB) VEJY3_10780 PF02600 Disulfide bond formation protein DsbB VEJY3_10785 PF07517 SecA DEAD-like domain VEJY3_10785 PF02810 SEC-C motif VEJY3_10785 PF07516 SecA Wing and Scaffold domain VEJY3_10785 PF01043 SecA preprotein cross-linking domain VEJY3_10790 PF01207 Dihydrouridine synthase (Dus) VEJY3_10795 PF00990 Diguanylate cyclase, GGDEF domain VEJY3_10800 PF00128 Alpha amylase, catalytic domain VEJY3_10800 PF02903 Alpha amylase, N-terminal ig-like domain VEJY3_10805 PF00005 ABC transporter VEJY3_10810 PF02653 Branched-chain amino acid transport system / permease component VEJY3_10820 PF04217 Protein of unknown function, DUF412 VEJY3_10825 PF00871 Acetokinase family VEJY3_10830 PF07085 DRTGG domain VEJY3_10830 PF01515 Phosphate acetyl/butaryl transferase VEJY3_10835 PF13194 Domain of unknown function (DUF4010) VEJY3_10840 PF13409 Glutathione S-transferase, N-terminal domain VEJY3_10845 PF00005 ABC transporter VEJY3_10845 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VEJY3_10850 PF00005 ABC transporter VEJY3_10850 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VEJY3_10855 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_10855 PF12911 N-terminal TM domain of oligopeptide transport permease C VEJY3_10860 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_10865 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VEJY3_10870 PF02391 MoaE protein VEJY3_10875 PF02597 ThiS family VEJY3_10880 PF01967 MoaC family VEJY3_10885 PF00994 Probable molybdopterin binding domain VEJY3_10890 PF06463 Molybdenum Cofactor Synthesis C VEJY3_10890 PF04055 Radical SAM superfamily VEJY3_10895 PF01933 Uncharacterised protein family UPF0052 VEJY3_10900 PF01627 Hpt domain VEJY3_10905 PF00158 Sigma-54 interaction domain VEJY3_10905 PF02954 Bacterial regulatory protein, Fis family VEJY3_10905 PF00072 Response regulator receiver domain VEJY3_10910 PF02151 UvrB/uvrC motif VEJY3_10910 PF17757 UvrB interaction domain VEJY3_10910 PF12344 Ultra-violet resistance protein B VEJY3_10910 PF04851 Type III restriction enzyme, res subunit VEJY3_10910 PF00271 Helicase conserved C-terminal domain VEJY3_10915 PF02508 Rnf-Nqr subunit, membrane protein VEJY3_10920 PF04060 Putative Fe-S cluster VEJY3_10925 PF13375 RnfC Barrel sandwich hybrid domain VEJY3_10925 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit VEJY3_10925 PF12838 4Fe-4S dicluster domain VEJY3_10925 PF10531 SLBB domain VEJY3_10930 PF03116 NQR2, RnfD, RnfE family VEJY3_10935 PF04205 FMN-binding domain VEJY3_10940 PF02508 Rnf-Nqr subunit, membrane protein VEJY3_10945 PF10576 Iron-sulfur binding domain of endonuclease III VEJY3_10945 PF00633 Helix-hairpin-helix motif VEJY3_10945 PF00730 HhH-GPD superfamily base excision DNA repair protein VEJY3_10950 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VEJY3_10955 PF10952 Protein of unknown function (DUF2753) VEJY3_10960 PF18393 MotY N-terminal domain VEJY3_10960 PF00691 OmpA family VEJY3_10965 PF00929 Exonuclease VEJY3_10970 PF13726 Na+-H+ antiporter family VEJY3_10970 PF03553 Na+/H+ antiporter family VEJY3_10980 PF00462 Glutaredoxin VEJY3_10985 PF02777 Iron/manganese superoxide dismutases, C-terminal domain VEJY3_10985 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain VEJY3_11000 PF00171 Aldehyde dehydrogenase family VEJY3_11000 PF00465 Iron-containing alcohol dehydrogenase VEJY3_11010 PF01914 MarC family integral membrane protein VEJY3_11015 PF00520 Ion transport protein VEJY3_11015 PF00027 Cyclic nucleotide-binding domain VEJY3_11020 PF02774 Semialdehyde dehydrogenase, dimerisation domain VEJY3_11020 PF01118 Semialdehyde dehydrogenase, NAD binding domain VEJY3_11025 PF03553 Na+/H+ antiporter family VEJY3_11040 PF04245 37-kD nucleoid-associated bacterial protein VEJY3_11045 PF07208 Protein of unknown function (DUF1414) VEJY3_11050 PF00884 Sulfatase VEJY3_11050 PF11893 Domain of unknown function (DUF3413) VEJY3_11055 PF01497 Periplasmic binding protein VEJY3_11060 PF00593 TonB dependent receptor VEJY3_11060 PF07715 TonB-dependent Receptor Plug Domain VEJY3_11065 PF01032 FecCD transport family VEJY3_11070 PF01032 FecCD transport family VEJY3_11075 PF00005 ABC transporter VEJY3_11080 PF01037 Lrp/AsnC ligand binding domain VEJY3_11085 PF01053 Cys/Met metabolism PLP-dependent enzyme VEJY3_11090 PF00497 Bacterial extracellular solute-binding proteins, family 3 VEJY3_11095 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_11100 PF00005 ABC transporter VEJY3_11105 PF00850 Histone deacetylase domain VEJY3_11110 PF00106 short chain dehydrogenase VEJY3_11115 PF01751 Toprim domain VEJY3_11115 PF01131 DNA topoisomerase VEJY3_11120 PF00881 Nitroreductase family VEJY3_11125 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VEJY3_11125 PF07992 Pyridine nucleotide-disulphide oxidoreductase VEJY3_11130 PF01343 Peptidase family S49 VEJY3_11135 PF17763 Glutaminase/Asparaginase C-terminal domain VEJY3_11135 PF00710 Asparaginase, N-terminal VEJY3_11140 PF07023 Protein of unknown function (DUF1315) VEJY3_11150 PF01641 SelR domain VEJY3_11155 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VEJY3_11155 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VEJY3_11160 PF01263 Aldose 1-epimerase VEJY3_11165 PF13847 Methyltransferase domain VEJY3_11180 PF00245 Alkaline phosphatase VEJY3_11185 PF00924 Mechanosensitive ion channel VEJY3_11185 PF05552 Conserved TM helix VEJY3_11190 PF03692 Putative zinc- or iron-chelating domain VEJY3_11195 PF04226 Transglycosylase associated protein VEJY3_11200 PF03692 Putative zinc- or iron-chelating domain VEJY3_11205 PF00230 Major intrinsic protein VEJY3_11210 PF02132 RecR protein VEJY3_11210 PF13662 Toprim domain VEJY3_11215 PF02575 YbaB/EbfC DNA-binding family VEJY3_11220 PF12170 DNA polymerase III tau subunit V interacting with alpha VEJY3_11220 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding VEJY3_11220 PF12169 DNA polymerase III subunits gamma and tau domain III VEJY3_11225 PF00156 Phosphoribosyl transferase domain VEJY3_11240 PF00072 Response regulator receiver domain VEJY3_11245 PF03466 LysR substrate binding domain VEJY3_11245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_11250 PF02278 Polysaccharide lyase family 8, super-sandwich domain VEJY3_11250 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain VEJY3_11250 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain VEJY3_11255 PF00156 Phosphoribosyl transferase domain VEJY3_11260 PF02674 Colicin V production protein VEJY3_11265 PF05036 Sporulation related domain VEJY3_11270 PF02875 Mur ligase family, glutamate ligase domain VEJY3_11270 PF08245 Mur ligase middle domain VEJY3_11275 PF17848 Acetyl-coA carboxylase zinc finger domain VEJY3_11275 PF01039 Carboxyl transferase domain VEJY3_11280 PF01416 tRNA pseudouridine synthase VEJY3_11290 PF01118 Semialdehyde dehydrogenase, NAD binding domain VEJY3_11290 PF02774 Semialdehyde dehydrogenase, dimerisation domain VEJY3_11295 PF11890 Domain of unknown function (DUF3410) VEJY3_11295 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VEJY3_11295 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VEJY3_11300 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VEJY3_11305 PF00455 DeoR C terminal sensor domain VEJY3_11305 PF08220 DeoR-like helix-turn-helix domain VEJY3_11315 PF02801 Beta-ketoacyl synthase, C-terminal domain VEJY3_11315 PF00109 Beta-ketoacyl synthase, N-terminal domain VEJY3_11320 PF05430 S-adenosyl-L-methionine-dependent methyltransferase VEJY3_11320 PF01266 FAD dependent oxidoreductase VEJY3_11325 PF03358 NADPH-dependent FMN reductase VEJY3_11330 PF08891 YfcL protein VEJY3_11335 PF04315 Elongation factor P hydroxylase VEJY3_11340 PF03458 UPF0126 domain VEJY3_11345 PF01264 Chorismate synthase VEJY3_11350 PF05175 Methyltransferase small domain VEJY3_11355 PF01713 Smr domain VEJY3_11360 PF00300 Histidine phosphatase superfamily (branch 1) VEJY3_11365 PF00675 Insulinase (Peptidase family M16) VEJY3_11365 PF16187 Middle or third domain of peptidase_M16 VEJY3_11365 PF05193 Peptidase M16 inactive domain VEJY3_11375 PF00378 Enoyl-CoA hydratase/isomerase VEJY3_11375 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain VEJY3_11375 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain VEJY3_11380 PF00108 Thiolase, N-terminal domain VEJY3_11380 PF02803 Thiolase, C-terminal domain VEJY3_11385 PF04542 Sigma-70 region 2 VEJY3_11385 PF08281 Sigma-70, region 4 VEJY3_11395 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VEJY3_11400 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VEJY3_11405 PF04333 MlaA lipoprotein VEJY3_11415 PF03918 Cytochrome C biogenesis protein VEJY3_11420 PF08534 Redoxin VEJY3_11425 PF01578 Cytochrome C assembly protein VEJY3_11425 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal VEJY3_11430 PF03100 CcmE VEJY3_11435 PF04995 Heme exporter protein D (CcmD) VEJY3_11440 PF01578 Cytochrome C assembly protein VEJY3_11445 PF03379 CcmB protein VEJY3_11450 PF00005 ABC transporter VEJY3_11460 PF01584 CheW-like domain VEJY3_11470 PF13614 AAA domain VEJY3_11475 PF00072 Response regulator receiver domain VEJY3_11475 PF01339 CheB methylesterase VEJY3_11480 PF01584 CheW-like domain VEJY3_11480 PF02895 Signal transducing histidine kinase, homodimeric domain VEJY3_11480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_11480 PF01627 Hpt domain VEJY3_11480 PF07194 P2 response regulator binding domain VEJY3_11485 PF04344 Chemotaxis phosphatase, CheZ VEJY3_11490 PF00072 Response regulator receiver domain VEJY3_11495 PF04545 Sigma-70, region 4 VEJY3_11495 PF04539 Sigma-70 region 3 VEJY3_11495 PF04542 Sigma-70 region 2 VEJY3_11500 PF10609 NUBPL iron-transfer P-loop NTPase VEJY3_11505 PF00448 SRP54-type protein, GTPase domain VEJY3_11510 PF00771 FHIPEP family VEJY3_11515 PF01312 FlhB HrpN YscU SpaS Family VEJY3_11520 PF01311 Bacterial export proteins, family 1 VEJY3_11525 PF01313 Bacterial export proteins, family 3 VEJY3_11530 PF00813 FliP family VEJY3_11535 PF04347 Flagellar biosynthesis protein, FliO VEJY3_11540 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VEJY3_11545 PF02154 Flagellar motor switch protein FliM VEJY3_11545 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term VEJY3_11565 PF18269 T3SS EscN ATPase C-terminal domain VEJY3_11565 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VEJY3_11575 PF14842 FliG N-terminal domain VEJY3_11575 PF14841 FliG middle domain VEJY3_11575 PF01706 FliG C-terminal domain VEJY3_11580 PF08345 Flagellar M-ring protein C-terminal VEJY3_11580 PF01514 Secretory protein of YscJ/FliF family VEJY3_11585 PF02049 Flagellar hook-basal body complex protein FliE VEJY3_11590 PF00158 Sigma-54 interaction domain VEJY3_11590 PF00072 Response regulator receiver domain VEJY3_11590 PF02954 Bacterial regulatory protein, Fis family VEJY3_11595 PF00512 His Kinase A (phospho-acceptor) domain VEJY3_11595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_11600 PF00158 Sigma-54 interaction domain VEJY3_11600 PF01590 GAF domain VEJY3_11600 PF02954 Bacterial regulatory protein, Fis family VEJY3_11610 PF02561 Flagellar protein FliS VEJY3_11620 PF07196 Flagellin hook IN motif VEJY3_11620 PF07195 Flagellar hook-associated protein 2 C-terminus VEJY3_11620 PF02465 Flagellar hook-associated protein 2 N-terminus VEJY3_11625 PF03646 FlaG protein VEJY3_11630 PF00669 Bacterial flagellin N-terminal helical region VEJY3_11630 PF07196 Flagellin hook IN motif VEJY3_11630 PF00700 Bacterial flagellin C-terminal helical region VEJY3_11635 PF00700 Bacterial flagellin C-terminal helical region VEJY3_11635 PF07196 Flagellin hook IN motif VEJY3_11635 PF00669 Bacterial flagellin N-terminal helical region VEJY3_11640 PF00669 Bacterial flagellin N-terminal helical region VEJY3_11640 PF07196 Flagellin hook IN motif VEJY3_11640 PF00700 Bacterial flagellin C-terminal helical region VEJY3_11645 PF04261 Dyp-type peroxidase family VEJY3_11650 PF11143 Protein of unknown function (DUF2919) VEJY3_11660 PF13698 Domain of unknown function (DUF4156) VEJY3_11670 PF03960 ArsC family VEJY3_11675 PF01546 Peptidase family M20/M25/M40 VEJY3_11675 PF07687 Peptidase dimerisation domain VEJY3_11690 PF06804 NlpB/DapX lipoprotein VEJY3_11695 PF00701 Dihydrodipicolinate synthetase family VEJY3_11700 PF01842 ACT domain VEJY3_11705 PF00578 AhpC/TSA family VEJY3_11735 PF00578 AhpC/TSA family VEJY3_11755 PF18766 SWI2/SNF2 ATPase VEJY3_11755 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) VEJY3_11755 PF11867 Domain of unknown function (DUF3387) VEJY3_11785 PF01420 Type I restriction modification DNA specificity domain VEJY3_11790 PF02384 N-6 DNA Methylase VEJY3_11795 PF00589 Phage integrase family VEJY3_11795 PF02899 Phage integrase, N-terminal SAM-like domain VEJY3_11825 PF00196 Bacterial regulatory proteins, luxR family VEJY3_11825 PF00072 Response regulator receiver domain VEJY3_11860 PF00578 AhpC/TSA family VEJY3_11865 PF01594 AI-2E family transporter VEJY3_11875 PF13181 Tetratricopeptide repeat VEJY3_11875 PF01435 Peptidase family M48 VEJY3_11880 PF03960 ArsC family VEJY3_11885 PF03358 NADPH-dependent FMN reductase VEJY3_11900 PF00860 Permease family VEJY3_11910 PF00586 AIR synthase related protein, N-terminal domain VEJY3_11910 PF02769 AIR synthase related protein, C-terminal domain VEJY3_11915 PF00551 Formyl transferase VEJY3_11920 PF13230 Glutamine amidotransferases class-II VEJY3_11925 PF13580 SIS domain VEJY3_11930 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VEJY3_11930 PF09317 Domain of unknown function (DUF1974) VEJY3_11930 PF02770 Acyl-CoA dehydrogenase, middle domain VEJY3_11930 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VEJY3_11935 PF01740 STAS domain VEJY3_11935 PF00916 Sulfate permease family VEJY3_11945 PF00929 Exonuclease VEJY3_11950 PF00075 RNase H VEJY3_11955 PF08241 Methyltransferase domain VEJY3_11960 PF16123 Hydroxyacylglutathione hydrolase C-terminus VEJY3_11960 PF00753 Metallo-beta-lactamase superfamily VEJY3_11965 PF01464 Transglycosylase SLT domain VEJY3_11965 PF01476 LysM domain VEJY3_11975 PF03372 Endonuclease/Exonuclease/phosphatase family VEJY3_11980 PF00543 Nitrogen regulatory protein P-II VEJY3_11985 PF00034 Cytochrome c VEJY3_11990 PF01171 PP-loop family VEJY3_11990 PF11734 TilS substrate C-terminal domain VEJY3_11990 PF09179 TilS substrate binding domain VEJY3_11995 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit VEJY3_12000 PF01336 OB-fold nucleic acid binding domain VEJY3_12000 PF02811 PHP domain VEJY3_12000 PF07733 Bacterial DNA polymerase III alpha NTPase domain VEJY3_12000 PF14579 Helix-hairpin-helix motif VEJY3_12000 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VEJY3_12005 PF01351 Ribonuclease HII VEJY3_12010 PF02684 Lipid-A-disaccharide synthetase VEJY3_12015 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 VEJY3_12015 PF00132 Bacterial transferase hexapeptide (six repeats) VEJY3_12020 PF07977 FabA-like domain VEJY3_12025 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD VEJY3_12025 PF00132 Bacterial transferase hexapeptide (six repeats) VEJY3_12030 PF03938 Outer membrane protein (OmpH-like) VEJY3_12035 PF07244 Surface antigen variable number repeat VEJY3_12035 PF01103 Surface antigen VEJY3_12040 PF17820 PDZ domain VEJY3_12040 PF02163 Peptidase family M50 VEJY3_12045 PF13288 DXP reductoisomerase C-terminal domain VEJY3_12045 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase VEJY3_12045 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain VEJY3_12055 PF01255 Putative undecaprenyl diphosphate synthase VEJY3_12060 PF01765 Ribosome recycling factor VEJY3_12065 PF00696 Amino acid kinase family VEJY3_12070 PF00889 Elongation factor TS VEJY3_12075 PF00318 Ribosomal protein S2 VEJY3_12080 PF00557 Metallopeptidase family M24 VEJY3_12085 PF01842 ACT domain VEJY3_12085 PF01909 Nucleotidyltransferase domain VEJY3_12085 PF08335 GlnD PII-uridylyltransferase VEJY3_12085 PF01966 HD domain VEJY3_12090 PF11944 Protein of unknown function (DUF3461) VEJY3_12095 PF00849 RNA pseudouridylate synthase VEJY3_12130 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 VEJY3_12135 PF03806 AbgT putative transporter family VEJY3_12140 PF00444 Ribosomal protein L36 VEJY3_12145 PF01197 Ribosomal protein L31 VEJY3_12150 PF18389 TrmO C-terminal domain VEJY3_12150 PF01980 tRNA-methyltransferase O VEJY3_12155 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) VEJY3_12155 PF04073 Aminoacyl-tRNA editing domain VEJY3_12155 PF03129 Anticodon binding domain VEJY3_12160 PF06786 Uncharacterised protein family (UPF0253) VEJY3_12170 PF00209 Sodium:neurotransmitter symporter family VEJY3_12180 PF01272 Transcription elongation factor, GreA/GreB, C-term VEJY3_12180 PF03449 Transcription elongation factor, N-terminal VEJY3_12185 PF00271 Helicase conserved C-terminal domain VEJY3_12185 PF00570 HRDC domain VEJY3_12185 PF16124 RecQ zinc-binding VEJY3_12185 PF09382 RQC domain VEJY3_12185 PF00270 DEAD/DEAH box helicase VEJY3_12190 PF11798 IMS family HHH motif VEJY3_12190 PF11799 impB/mucB/samB family C-terminal domain VEJY3_12190 PF00817 impB/mucB/samB family VEJY3_12200 PF04400 (Na+)-NQR maturation NqrM VEJY3_12205 PF02424 ApbE family VEJY3_12210 PF00111 2Fe-2S iron-sulfur cluster binding domain VEJY3_12210 PF00970 Oxidoreductase FAD-binding domain VEJY3_12210 PF00175 Oxidoreductase NAD-binding domain VEJY3_12215 PF02508 Rnf-Nqr subunit, membrane protein VEJY3_12220 PF02508 Rnf-Nqr subunit, membrane protein VEJY3_12225 PF04205 FMN-binding domain VEJY3_12230 PF03116 NQR2, RnfD, RnfE family VEJY3_12235 PF05896 Na(+)-translocating NADH-quinone reductase subunit A (NQRA) VEJY3_12235 PF11973 NQRA C-terminal domain VEJY3_12240 PF01722 BolA-like protein VEJY3_12245 PF05175 Methyltransferase small domain VEJY3_12255 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VEJY3_12260 PF07690 Major Facilitator Superfamily VEJY3_12270 PF04545 Sigma-70, region 4 VEJY3_12270 PF04542 Sigma-70 region 2 VEJY3_12285 PF03502 Nucleoside-specific channel-forming protein, Tsx VEJY3_12290 PF08546 Ketopantoate reductase PanE/ApbA C terminal VEJY3_12290 PF02558 Ketopantoate reductase PanE/ApbA VEJY3_12295 PF01965 DJ-1/PfpI family VEJY3_12300 PF00266 Aminotransferase class-V VEJY3_12305 PF00990 Diguanylate cyclase, GGDEF domain VEJY3_12305 PF07694 5TMR of 5TMR-LYT VEJY3_12310 PF02657 Fe-S metabolism associated domain VEJY3_12315 PF00899 ThiF family VEJY3_12320 PF06725 3D domain VEJY3_12320 PF03562 MltA specific insert domain VEJY3_12330 PF00583 Acetyltransferase (GNAT) family VEJY3_12330 PF00696 Amino acid kinase family VEJY3_12335 PF13538 UvrD-like helicase C-terminal domain VEJY3_12340 PF00580 UvrD/REP helicase N-terminal domain VEJY3_12340 PF13361 UvrD-like helicase C-terminal domain VEJY3_12340 PF12705 PD-(D/E)XK nuclease superfamily VEJY3_12345 PF17946 RecC C-terminal domain VEJY3_12350 PF00884 Sulfatase VEJY3_12350 PF11893 Domain of unknown function (DUF3413) VEJY3_12360 PF03466 LysR substrate binding domain VEJY3_12360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_12365 PF07130 YebG protein VEJY3_12375 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle VEJY3_12375 PF14602 Hexapeptide repeat of succinyl-transferase VEJY3_12380 PF03009 Glycerophosphoryl diester phosphodiesterase family VEJY3_12385 PF07690 Major Facilitator Superfamily VEJY3_12390 PF00230 Major intrinsic protein VEJY3_12395 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VEJY3_12395 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VEJY3_12400 PF08220 DeoR-like helix-turn-helix domain VEJY3_12400 PF00455 DeoR C terminal sensor domain VEJY3_12405 PF01266 FAD dependent oxidoreductase VEJY3_12405 PF16901 C-terminal domain of alpha-glycerophosphate oxidase VEJY3_12410 PF01544 CorA-like Mg2+ transporter protein VEJY3_12430 PF00356 Bacterial regulatory proteins, lacI family VEJY3_12435 PF00356 Bacterial regulatory proteins, lacI family VEJY3_12440 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_12440 PF03466 LysR substrate binding domain VEJY3_12480 PF00437 Type II/IV secretion system protein VEJY3_12510 PF00263 Bacterial type II and III secretion system protein VEJY3_12510 PF13629 Pilus formation protein N terminal region VEJY3_12510 PF04972 BON domain VEJY3_12540 PF02805 Metal binding domain of Ada VEJY3_12540 PF12833 Helix-turn-helix domain VEJY3_12545 PF00501 AMP-binding enzyme VEJY3_12555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_12555 PF03466 LysR substrate binding domain VEJY3_12560 PF03144 Elongation factor Tu domain 2 VEJY3_12560 PF00009 Elongation factor Tu GTP binding domain VEJY3_12560 PF03764 Elongation factor G, domain IV VEJY3_12560 PF14492 Elongation Factor G, domain II VEJY3_12560 PF00679 Elongation factor G C-terminus VEJY3_12565 PF18073 Rubredoxin metal binding domain VEJY3_12575 PF18429 Domain of unknown function (DUF5609) VEJY3_12585 PF01048 Phosphorylase superfamily VEJY3_12590 PF01676 Metalloenzyme superfamily VEJY3_12595 PF02885 Glycosyl transferase family, helical bundle domain VEJY3_12595 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain VEJY3_12595 PF00591 Glycosyl transferase family, a/b domain VEJY3_12600 PF01791 DeoC/LacD family aldolase VEJY3_12605 PF01773 Na+ dependent nucleoside transporter N-terminus VEJY3_12605 PF07670 Nucleoside recognition VEJY3_12605 PF07662 Na+ dependent nucleoside transporter C-terminus VEJY3_12610 PF01026 TatD related DNase VEJY3_12620 PF00009 Elongation factor Tu GTP binding domain VEJY3_12620 PF16658 Class II release factor RF3, C-terminal domain VEJY3_12620 PF03144 Elongation factor Tu domain 2 VEJY3_12635 PF13508 Acetyltransferase (GNAT) domain VEJY3_12645 PF00990 Diguanylate cyclase, GGDEF domain VEJY3_12645 PF03707 Bacterial signalling protein N terminal repeat VEJY3_12645 PF00563 EAL domain VEJY3_12660 PF01554 MatE VEJY3_12665 PF13181 Tetratricopeptide repeat VEJY3_12665 PF07719 Tetratricopeptide repeat VEJY3_12670 PF01138 3' exoribonuclease family, domain 1 VEJY3_12670 PF00575 S1 RNA binding domain VEJY3_12670 PF03725 3' exoribonuclease family, domain 2 VEJY3_12670 PF00013 KH domain VEJY3_12670 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain VEJY3_12675 PF00312 Ribosomal protein S15 VEJY3_12680 PF09157 Pseudouridine synthase II TruB, C-terminal VEJY3_12680 PF16198 tRNA pseudouridylate synthase B C-terminal domain VEJY3_12680 PF01509 TruB family pseudouridylate synthase (N terminal domain) VEJY3_12685 PF02033 Ribosome-binding factor A VEJY3_12690 PF08364 Bacterial translation initiation factor IF-2 associated region VEJY3_12690 PF04760 Translation initiation factor IF-2, N-terminal region VEJY3_12690 PF11987 Translation-initiation factor 2 VEJY3_12690 PF00009 Elongation factor Tu GTP binding domain VEJY3_12695 PF08529 NusA N-terminal domain VEJY3_12695 PF13184 NusA-like KH domain VEJY3_12695 PF00575 S1 RNA binding domain VEJY3_12700 PF17384 RimP C-terminal SH3 domain VEJY3_12700 PF02576 RimP N-terminal domain VEJY3_12705 PF03840 Preprotein translocase SecG subunit VEJY3_12715 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VEJY3_12715 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VEJY3_12715 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VEJY3_12715 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VEJY3_12720 PF00809 Pterin binding enzyme VEJY3_12725 PF01434 Peptidase family M41 VEJY3_12725 PF00004 ATPase family associated with various cellular activities (AAA) VEJY3_12725 PF17862 AAA+ lid domain VEJY3_12725 PF06480 FtsH Extracellular VEJY3_12730 PF01728 FtsJ-like methyltransferase VEJY3_12735 PF01985 CRS1 / YhbY (CRM) domain VEJY3_12740 PF01272 Transcription elongation factor, GreA/GreB, C-term VEJY3_12740 PF03449 Transcription elongation factor, N-terminal VEJY3_12745 PF13609 Gram-negative porin VEJY3_12750 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family VEJY3_12765 PF00579 tRNA synthetases class I (W and Y) VEJY3_12770 PF01551 Peptidase family M23 VEJY3_12770 PF08525 Opacity-associated protein A N-terminal motif VEJY3_12770 PF01476 LysM domain VEJY3_12775 PF00873 AcrB/AcrD/AcrF family VEJY3_12780 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VEJY3_12785 PF01521 Iron-sulphur cluster biosynthesis VEJY3_12790 PF00202 Aminotransferase class-III VEJY3_12800 PF01594 AI-2E family transporter VEJY3_12805 PF08468 Methyltransferase small domain N-terminal VEJY3_12805 PF05175 Methyltransferase small domain VEJY3_12810 PF09308 LuxQ, periplasmic VEJY3_12810 PF00512 His Kinase A (phospho-acceptor) domain VEJY3_12810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_12810 PF00072 Response regulator receiver domain VEJY3_12815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VEJY3_12820 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_12825 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_12825 PF12911 N-terminal TM domain of oligopeptide transport permease C VEJY3_12830 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VEJY3_12830 PF00005 ABC transporter VEJY3_12835 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VEJY3_12835 PF00005 ABC transporter VEJY3_12845 PF01869 BadF/BadG/BcrA/BcrD ATPase family VEJY3_12850 PF00728 Glycosyl hydrolase family 20, catalytic domain VEJY3_12850 PF02838 Glycosyl hydrolase family 20, domain 2 VEJY3_12855 PF06165 Glycosyltransferase family 36 VEJY3_12855 PF17167 Glycosyl hydrolase 36 superfamily, catalytic domain VEJY3_12860 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VEJY3_12860 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VEJY3_12860 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VEJY3_12860 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VEJY3_12865 PF08402 TOBE domain VEJY3_12865 PF00005 ABC transporter VEJY3_12875 PF13416 Bacterial extracellular solute-binding protein VEJY3_12880 PF00909 Ammonium Transporter Family VEJY3_12885 PF00543 Nitrogen regulatory protein P-II VEJY3_12890 PF06062 Uncharacterised protein family (UPF0231) VEJY3_12895 PF17853 GGDEF-like domain VEJY3_12895 PF13556 PucR C-terminal helix-turn-helix domain VEJY3_12895 PF05651 Putative sugar diacid recognition VEJY3_12900 PF02447 GntP family permease VEJY3_12905 PF02595 Glycerate kinase family VEJY3_12910 PF00330 Aconitase family (aconitate hydratase) VEJY3_12910 PF06434 Aconitate hydratase 2 N-terminus VEJY3_12910 PF11791 Aconitate B N-terminal domain VEJY3_12915 PF01734 Patatin-like phospholipase VEJY3_12920 PF00905 Penicillin binding protein transpeptidase domain VEJY3_12920 PF14814 Bifunctional transglycosylase second domain VEJY3_12920 PF00912 Transglycosylase VEJY3_12925 PF00270 DEAD/DEAH box helicase VEJY3_12925 PF04408 Helicase associated domain (HA2) VEJY3_12925 PF00271 Helicase conserved C-terminal domain VEJY3_12925 PF08482 ATP-dependent helicase C-terminal VEJY3_12930 PF17746 SfsA N-terminal OB domain VEJY3_12930 PF03749 Sugar fermentation stimulation protein RE domain VEJY3_12935 PF01258 Prokaryotic dksA/traR C4-type zinc finger VEJY3_12940 PF00749 tRNA synthetases class I (E and Q), catalytic domain VEJY3_12945 PF12627 Probable RNA and SrmB- binding site of polymerase A VEJY3_12945 PF01743 Poly A polymerase head domain VEJY3_12945 PF12626 Polymerase A arginine-rich C-terminus VEJY3_12950 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) VEJY3_12955 PF02548 Ketopantoate hydroxymethyltransferase VEJY3_12960 PF02569 Pantoate-beta-alanine ligase VEJY3_12965 PF01061 ABC-2 type transporter VEJY3_12970 PF00005 ABC transporter VEJY3_12975 PF00916 Sulfate permease family VEJY3_12975 PF01740 STAS domain VEJY3_12980 PF00484 Carbonic anhydrase VEJY3_12985 PF00156 Phosphoribosyl transferase domain VEJY3_12990 PF00440 Bacterial regulatory proteins, tetR family VEJY3_12995 PF07992 Pyridine nucleotide-disulphide oxidoreductase VEJY3_12995 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VEJY3_13000 PF00364 Biotin-requiring enzyme VEJY3_13000 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VEJY3_13000 PF02817 e3 binding domain VEJY3_13005 PF00456 Transketolase, thiamine diphosphate binding domain VEJY3_13005 PF17831 Pyruvate dehydrogenase E1 component middle domain VEJY3_13010 PF00392 Bacterial regulatory proteins, gntR family VEJY3_13010 PF07729 FCD domain VEJY3_13015 PF01510 N-acetylmuramoyl-L-alanine amidase VEJY3_13020 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain VEJY3_13020 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain VEJY3_13025 PF07963 Prokaryotic N-terminal methylation motif VEJY3_13025 PF00114 Pilin (bacterial filament) VEJY3_13030 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VEJY3_13030 PF00437 Type II/IV secretion system protein VEJY3_13035 PF00482 Type II secretion system (T2SS), protein F VEJY3_13040 PF01478 Type IV leader peptidase family VEJY3_13040 PF06750 Bacterial Peptidase A24 N-terminal domain VEJY3_13045 PF01121 Dephospho-CoA kinase VEJY3_13050 PF07072 Cell division protein VEJY3_13055 PF03884 DNA gyrase inhibitor YacG VEJY3_13060 PF01245 Ribosomal protein L19 VEJY3_13065 PF01746 tRNA (Guanine-1)-methyltransferase VEJY3_13070 PF05239 PRC-barrel domain VEJY3_13070 PF01782 RimM N-terminal domain VEJY3_13075 PF00886 Ribosomal protein S16 VEJY3_13080 PF00448 SRP54-type protein, GTPase domain VEJY3_13080 PF02881 SRP54-type protein, helical bundle domain VEJY3_13080 PF02978 Signal peptide binding domain VEJY3_13085 PF01578 Cytochrome C assembly protein VEJY3_13090 PF00571 CBS domain VEJY3_13090 PF01595 Cyclin M transmembrane N-terminal domain VEJY3_13090 PF03471 Transporter associated domain VEJY3_13095 PF02664 S-Ribosylhomocysteinase (LuxS) VEJY3_13105 PF04262 Glutamate-cysteine ligase VEJY3_13110 PF00675 Insulinase (Peptidase family M16) VEJY3_13110 PF05193 Peptidase M16 inactive domain VEJY3_13115 PF09335 SNARE associated Golgi protein VEJY3_13120 PF08240 Alcohol dehydrogenase GroES-like domain VEJY3_13120 PF00107 Zinc-binding dehydrogenase VEJY3_13125 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit VEJY3_13130 PF02436 Conserved carboxylase domain VEJY3_13130 PF00682 HMGL-like VEJY3_13130 PF00364 Biotin-requiring enzyme VEJY3_13135 PF04277 Oxaloacetate decarboxylase, gamma chain VEJY3_13140 PF02599 Global regulator protein family VEJY3_13145 PF13840 ACT domain VEJY3_13145 PF00696 Amino acid kinase family VEJY3_13145 PF01842 ACT domain VEJY3_13150 PF02272 DHHA1 domain VEJY3_13150 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain VEJY3_13150 PF01411 tRNA synthetases class II (A) VEJY3_13155 PF02631 RecX family VEJY3_13160 PF00154 recA bacterial DNA recombination protein VEJY3_13165 PF02464 Competence-damaged protein VEJY3_13170 PF01624 MutS domain I VEJY3_13170 PF00488 MutS domain V VEJY3_13170 PF05188 MutS domain II VEJY3_13170 PF05192 MutS domain III VEJY3_13170 PF05190 MutS family domain IV VEJY3_13175 PF00140 Sigma-70 factor, region 1.2 VEJY3_13175 PF04542 Sigma-70 region 2 VEJY3_13175 PF04539 Sigma-70 region 3 VEJY3_13175 PF04545 Sigma-70, region 4 VEJY3_13180 PF01551 Peptidase family M23 VEJY3_13180 PF01476 LysM domain VEJY3_13190 PF01975 Survival protein SurE VEJY3_13195 PF01142 tRNA pseudouridine synthase D (TruD) VEJY3_13200 PF02542 YgbB family VEJY3_13205 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase VEJY3_13210 PF04977 Septum formation initiator VEJY3_13215 PF00113 Enolase, C-terminal TIM barrel domain VEJY3_13215 PF03952 Enolase, N-terminal domain VEJY3_13220 PF00117 Glutamine amidotransferase class-I VEJY3_13220 PF06418 CTP synthase N-terminus VEJY3_13225 PF03819 MazG nucleotide pyrophosphohydrolase domain VEJY3_13230 PF13291 ACT domain VEJY3_13230 PF02824 TGS domain VEJY3_13230 PF04607 Region found in RelA / SpoT proteins VEJY3_13235 PF05958 tRNA (Uracil-5-)-methyltransferase VEJY3_13235 PF01938 TRAM domain VEJY3_13240 PF00512 His Kinase A (phospho-acceptor) domain VEJY3_13240 PF00672 HAMP domain VEJY3_13240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_13240 PF01627 Hpt domain VEJY3_13240 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VEJY3_13240 PF00072 Response regulator receiver domain VEJY3_13245 PF01648 4'-phosphopantetheinyl transferase superfamily VEJY3_13250 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ VEJY3_13255 PF02565 Recombination protein O C terminal VEJY3_13255 PF11967 Recombination protein O N terminal VEJY3_13260 PF01926 50S ribosome-binding GTPase VEJY3_13260 PF07650 KH domain VEJY3_13265 PF14622 Ribonuclease-III-like VEJY3_13265 PF00035 Double-stranded RNA binding motif VEJY3_13270 PF10502 Signal peptidase, peptidase S26 VEJY3_13275 PF00679 Elongation factor G C-terminus VEJY3_13275 PF00009 Elongation factor Tu GTP binding domain VEJY3_13275 PF06421 GTP-binding protein LepA C-terminus VEJY3_13275 PF03144 Elongation factor Tu domain 2 VEJY3_13285 PF17188 MucB/RseB C-terminal domain VEJY3_13285 PF03888 MucB/RseB N-terminal domain VEJY3_13290 PF03872 Anti sigma-E protein RseA, N-terminal domain VEJY3_13290 PF03873 Anti sigma-E protein RseA, C-terminal domain VEJY3_13295 PF04542 Sigma-70 region 2 VEJY3_13295 PF08281 Sigma-70, region 4 VEJY3_13300 PF02910 Fumarate reductase flavoprotein C-term VEJY3_13300 PF00890 FAD binding domain VEJY3_13305 PF03937 Flavinator of succinate dehydrogenase VEJY3_13310 PF01571 Aminomethyltransferase folate-binding domain VEJY3_13325 PF01494 FAD binding domain VEJY3_13330 PF01494 FAD binding domain VEJY3_13335 PF03695 Uncharacterised protein family (UPF0149) VEJY3_13340 PF05164 Cell division protein ZapA VEJY3_13345 PF01812 5-formyltetrahydrofolate cyclo-ligase family VEJY3_13350 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) VEJY3_13355 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VEJY3_13355 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VEJY3_13355 PF01842 ACT domain VEJY3_13360 PF04402 Protein of unknown function (DUF541) VEJY3_13365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_13365 PF03466 LysR substrate binding domain VEJY3_13370 PF01810 LysE type translocator VEJY3_13375 PF05552 Conserved TM helix VEJY3_13375 PF00924 Mechanosensitive ion channel VEJY3_13380 PF01116 Fructose-bisphosphate aldolase class-II VEJY3_13385 PF00162 Phosphoglycerate kinase VEJY3_13390 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VEJY3_13390 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VEJY3_13395 PF02779 Transketolase, pyrimidine binding domain VEJY3_13395 PF02780 Transketolase, C-terminal domain VEJY3_13395 PF00456 Transketolase, thiamine diphosphate binding domain VEJY3_13405 PF02773 S-adenosylmethionine synthetase, C-terminal domain VEJY3_13405 PF02772 S-adenosylmethionine synthetase, central domain VEJY3_13405 PF00438 S-adenosylmethionine synthetase, N-terminal domain VEJY3_13415 PF17283 SprT-like zinc ribbon domain VEJY3_13415 PF10263 SprT-like family VEJY3_13420 PF04231 Endonuclease I VEJY3_13425 PF04452 RNA methyltransferase VEJY3_13430 PF02951 Prokaryotic glutathione synthetase, N-terminal domain VEJY3_13430 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain VEJY3_13435 PF02622 Uncharacterized ACR, COG1678 VEJY3_13440 PF03652 Holliday junction resolvase VEJY3_13445 PF00437 Type II/IV secretion system protein VEJY3_13450 PF00437 Type II/IV secretion system protein VEJY3_13455 PF01168 Alanine racemase, N-terminal domain VEJY3_13460 PF14748 Pyrroline-5-carboxylate reductase dimerisation VEJY3_13460 PF03807 NADP oxidoreductase coenzyme F420-dependent VEJY3_13465 PF02325 YGGT family VEJY3_13470 PF02594 Uncharacterised ACR, YggU family COG1872 VEJY3_13480 PF01725 Ham1 family VEJY3_13495 PF04960 Glutaminase VEJY3_13500 PF02086 D12 class N6 adenine-specific DNA methyltransferase VEJY3_13505 PF02390 Putative methyltransferase VEJY3_13510 PF00633 Helix-hairpin-helix motif VEJY3_13510 PF14815 NUDIX domain VEJY3_13510 PF00730 HhH-GPD superfamily base excision DNA repair protein VEJY3_13515 PF04362 Bacterial Fe(2+) trafficking VEJY3_13520 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain VEJY3_13520 PF01464 Transglycosylase SLT domain VEJY3_13525 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VEJY3_13525 PF17200 Single Cache domain 2 VEJY3_13525 PF00672 HAMP domain VEJY3_13535 PF00106 short chain dehydrogenase VEJY3_13540 PF01758 Sodium Bile acid symporter family VEJY3_13545 PF00106 short chain dehydrogenase VEJY3_13550 PF10011 Predicted membrane protein (DUF2254) VEJY3_13560 PF03739 Lipopolysaccharide export system permease LptF/LptG VEJY3_13565 PF03739 Lipopolysaccharide export system permease LptF/LptG VEJY3_13570 PF02789 Cytosol aminopeptidase family, N-terminal domain VEJY3_13570 PF00883 Cytosol aminopeptidase family, catalytic domain VEJY3_13575 PF04364 DNA polymerase III chi subunit, HolC VEJY3_13580 PF08264 Anticodon-binding domain of tRNA VEJY3_13580 PF00133 tRNA synthetases class I (I, L, M and V) VEJY3_13580 PF10458 Valyl tRNA synthetase tRNA binding arm VEJY3_13590 PF00583 Acetyltransferase (GNAT) family VEJY3_13600 PF06877 Regulator of ribonuclease activity B VEJY3_13610 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VEJY3_13610 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VEJY3_13615 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain VEJY3_13615 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain VEJY3_13620 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain VEJY3_13620 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain VEJY3_13625 PF01042 Endoribonuclease L-PSP VEJY3_13630 PF01553 Acyltransferase VEJY3_13635 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) VEJY3_13640 PF01722 BolA-like protein VEJY3_13650 PF05494 MlaC protein VEJY3_13655 PF02470 MlaD protein VEJY3_13660 PF02405 Permease MlaE VEJY3_13665 PF00005 ABC transporter VEJY3_13670 PF01699 Sodium/calcium exchanger protein VEJY3_13675 PF01380 SIS domain VEJY3_13675 PF00571 CBS domain VEJY3_13685 PF03968 OstA-like protein VEJY3_13690 PF00005 ABC transporter VEJY3_13690 PF12399 Branched-chain amino acid ATP-binding cassette transporter VEJY3_13695 PF04552 Sigma-54, DNA binding domain VEJY3_13695 PF04963 Sigma-54 factor, core binding domain VEJY3_13695 PF00309 Sigma-54 factor, Activator interacting domain (AID) VEJY3_13700 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein VEJY3_13705 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VEJY3_13710 PF03668 P-loop ATPase protein family VEJY3_13715 PF00381 PTS HPr component phosphorylation site VEJY3_13720 PF00571 CBS domain VEJY3_13720 PF01769 Divalent cation transporter VEJY3_13720 PF03448 MgtE intracellular N domain VEJY3_13725 PF01523 Putative modulator of DNA gyrase VEJY3_13730 PF04751 Protein of unknown function (DUF615) VEJY3_13735 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VEJY3_13735 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VEJY3_13740 PF00849 RNA pseudouridylate synthase VEJY3_13750 PF18339 RapA N-terminal Tudor like domain 1 VEJY3_13750 PF18337 RapA N-terminal Tudor like domain VEJY3_13750 PF00176 SNF2 family N-terminal domain VEJY3_13750 PF12137 RNA polymerase recycling family C-terminal VEJY3_13750 PF00271 Helicase conserved C-terminal domain VEJY3_13755 PF02562 PhoH-like protein VEJY3_13755 PF13638 PIN domain VEJY3_13760 PF01523 Putative modulator of DNA gyrase VEJY3_13765 PF00795 Carbon-nitrogen hydrolase VEJY3_13770 PF13116 Protein of unknown function VEJY3_13770 PF13502 AsmA-like C-terminal region VEJY3_13775 PF00575 S1 RNA binding domain VEJY3_13775 PF10150 Ribonuclease E/G family VEJY3_13780 PF02545 Maf-like protein VEJY3_13785 PF04093 rod shape-determining protein MreD VEJY3_13790 PF04085 rod shape-determining protein MreC VEJY3_13830 PF07963 Prokaryotic N-terminal methylation motif VEJY3_13830 PF00114 Pilin (bacterial filament) VEJY3_13840 PF00482 Type II secretion system (T2SS), protein F VEJY3_13845 PF00437 Type II/IV secretion system protein VEJY3_13845 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain VEJY3_13855 PF13401 AAA domain VEJY3_13855 PF01471 Putative peptidoglycan binding domain VEJY3_13860 PF11741 AMIN domain VEJY3_13860 PF07660 Secretin and TonB N terminus short domain VEJY3_13860 PF03958 Bacterial type II/III secretion system short domain VEJY3_13860 PF00263 Bacterial type II and III secretion system protein VEJY3_13880 PF00563 EAL domain VEJY3_13880 PF17157 Gammaproteobacterial periplasmic sensor domain VEJY3_13880 PF00990 Diguanylate cyclase, GGDEF domain VEJY3_13885 PF00436 Single-strand binding protein family VEJY3_13890 PF00196 Bacterial regulatory proteins, luxR family VEJY3_13895 PF00483 Nucleotidyl transferase VEJY3_13900 PF00005 ABC transporter VEJY3_13900 PF17755 UvrA DNA-binding domain VEJY3_13900 PF17760 UvrA interaction domain VEJY3_13910 PF00266 Aminotransferase class-V VEJY3_13915 PF01842 ACT domain VEJY3_13915 PF00696 Amino acid kinase family VEJY3_13920 PF02574 Homocysteine S-methyltransferase VEJY3_13920 PF02607 B12 binding domain VEJY3_13920 PF00809 Pterin binding enzyme VEJY3_13920 PF02965 Vitamin B12 dependent methionine synthase, activation domain VEJY3_13920 PF02310 B12 binding domain VEJY3_13925 PF00999 Sodium/hydrogen exchanger family VEJY3_13930 PF13358 DDE superfamily endonuclease VEJY3_13935 PF01507 Phosphoadenosine phosphosulfate reductase family VEJY3_13940 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VEJY3_13940 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VEJY3_13945 PF00175 Oxidoreductase NAD-binding domain VEJY3_13945 PF00258 Flavodoxin VEJY3_13945 PF00667 FAD binding domain VEJY3_13965 PF01207 Dihydrouridine synthase (Dus) VEJY3_13970 PF01475 Ferric uptake regulator family VEJY3_13980 PF00342 Phosphoglucose isomerase VEJY3_13985 PF01894 Uncharacterised protein family UPF0047 VEJY3_13990 PF01168 Alanine racemase, N-terminal domain VEJY3_13990 PF00842 Alanine racemase, C-terminal domain VEJY3_13995 PF00772 DnaB-like helicase N terminal domain VEJY3_13995 PF03796 DnaB-like helicase C terminal domain VEJY3_14005 PF03948 Ribosomal protein L9, C-terminal domain VEJY3_14005 PF01281 Ribosomal protein L9, N-terminal domain VEJY3_14010 PF01084 Ribosomal protein S18 VEJY3_14015 PF00436 Single-strand binding protein family VEJY3_14020 PF01250 Ribosomal protein S6 VEJY3_14025 PF00834 Ribulose-phosphate 3 epimerase family VEJY3_14030 PF02086 D12 class N6 adenine-specific DNA methyltransferase VEJY3_14040 PF01761 3-dehydroquinate synthase VEJY3_14045 PF01202 Shikimate kinase VEJY3_14050 PF11741 AMIN domain VEJY3_14050 PF07660 Secretin and TonB N terminus short domain VEJY3_14050 PF03958 Bacterial type II/III secretion system short domain VEJY3_14050 PF00263 Bacterial type II and III secretion system protein VEJY3_14075 PF17092 Penicillin-binding protein OB-like domain VEJY3_14075 PF00905 Penicillin binding protein transpeptidase domain VEJY3_14075 PF00912 Transglycosylase VEJY3_14080 PF03466 LysR substrate binding domain VEJY3_14080 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_14085 PF08534 Redoxin VEJY3_14085 PF00462 Glutaredoxin VEJY3_14090 PF14698 Argininosuccinate lyase C-terminal VEJY3_14090 PF00583 Acetyltransferase (GNAT) family VEJY3_14090 PF00206 Lyase VEJY3_14095 PF00764 Arginosuccinate synthase VEJY3_14100 PF00696 Amino acid kinase family VEJY3_14105 PF01118 Semialdehyde dehydrogenase, NAD binding domain VEJY3_14105 PF02774 Semialdehyde dehydrogenase, dimerisation domain VEJY3_14110 PF07687 Peptidase dimerisation domain VEJY3_14110 PF01546 Peptidase family M20/M25/M40 VEJY3_14115 PF00311 Phosphoenolpyruvate carboxylase VEJY3_14125 PF02219 Methylenetetrahydrofolate reductase VEJY3_14130 PF00696 Amino acid kinase family VEJY3_14130 PF00742 Homoserine dehydrogenase VEJY3_14130 PF03447 Homoserine dehydrogenase, NAD binding domain VEJY3_14135 PF01053 Cys/Met metabolism PLP-dependent enzyme VEJY3_14140 PF01340 Met Apo-repressor, MetJ VEJY3_14145 PF03949 Malic enzyme, NAD binding domain VEJY3_14145 PF00390 Malic enzyme, N-terminal domain VEJY3_14150 PF00210 Ferritin-like domain VEJY3_14155 PF04324 BFD-like [2Fe-2S] binding domain VEJY3_14160 PF03143 Elongation factor Tu C-terminal domain VEJY3_14160 PF00009 Elongation factor Tu GTP binding domain VEJY3_14160 PF03144 Elongation factor Tu domain 2 VEJY3_14165 PF03144 Elongation factor Tu domain 2 VEJY3_14165 PF00679 Elongation factor G C-terminus VEJY3_14165 PF14492 Elongation Factor G, domain II VEJY3_14165 PF03764 Elongation factor G, domain IV VEJY3_14165 PF00009 Elongation factor Tu GTP binding domain VEJY3_14170 PF00177 Ribosomal protein S7p/S5e VEJY3_14175 PF00164 Ribosomal protein S12/S23 VEJY3_14180 PF04077 DsrH like protein VEJY3_14185 PF02635 DsrE/DsrF-like family VEJY3_14190 PF02635 DsrE/DsrF-like family VEJY3_14195 PF08348 YheO-like PAS domain VEJY3_14195 PF13309 HTH domain VEJY3_14200 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VEJY3_14200 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VEJY3_14210 PF04102 SlyX VEJY3_14215 PF01112 Asparaginase VEJY3_14220 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VEJY3_14230 PF00999 Sodium/hydrogen exchanger family VEJY3_14230 PF02254 TrkA-N domain VEJY3_14235 PF02525 Flavodoxin-like fold VEJY3_14240 PF00005 ABC transporter VEJY3_14240 PF12848 ABC transporter VEJY3_14250 PF00561 alpha/beta hydrolase fold VEJY3_14255 PF06794 Uncharacterised protein family (UPF0270) VEJY3_14260 PF00485 Phosphoribulokinase / Uridine kinase family VEJY3_14265 PF13545 Crp-like helix-turn-helix domain VEJY3_14265 PF00027 Cyclic nucleotide-binding domain VEJY3_14275 PF00171 Aldehyde dehydrogenase family VEJY3_14280 PF04958 Arginine N-succinyltransferase beta subunit VEJY3_14285 PF00202 Aminotransferase class-III VEJY3_14290 PF00117 Glutamine amidotransferase class-I VEJY3_14295 PF00579 tRNA synthetases class I (W and Y) VEJY3_14300 PF13419 Haloacid dehalogenase-like hydrolase VEJY3_14305 PF00588 SpoU rRNA Methylase family VEJY3_14305 PF08032 RNA 2'-O ribose methyltransferase substrate binding VEJY3_14310 PF08206 Ribonuclease B OB domain VEJY3_14310 PF00575 S1 RNA binding domain VEJY3_14310 PF08461 Ribonuclease R winged-helix domain VEJY3_14310 PF00773 RNB domain VEJY3_14310 PF17876 Cold shock domain VEJY3_14315 PF02082 Transcriptional regulator VEJY3_14320 PF00175 Oxidoreductase NAD-binding domain VEJY3_14320 PF00970 Oxidoreductase FAD-binding domain VEJY3_14320 PF00042 Globin VEJY3_14325 PF08238 Sel1 repeat VEJY3_14330 PF00709 Adenylosuccinate synthetase VEJY3_14335 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) VEJY3_14340 PF01145 SPFH domain / Band 7 family VEJY3_14345 PF12221 Bacterial membrane protein N terminal VEJY3_14345 PF01145 SPFH domain / Band 7 family VEJY3_14350 PF16360 GTP-binding GTPase Middle Region VEJY3_14350 PF13167 GTP-binding GTPase N-terminal VEJY3_14350 PF01926 50S ribosome-binding GTPase VEJY3_14355 PF17209 Hfq protein VEJY3_14365 PF01119 DNA mismatch repair protein, C-terminal domain VEJY3_14365 PF08676 MutL C terminal dimerisation domain VEJY3_14370 PF01520 N-acetylmuramoyl-L-alanine amidase VEJY3_14375 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE VEJY3_14380 PF08331 Domain of unknown function (DUF1730) VEJY3_14385 PF00929 Exonuclease VEJY3_14390 PF03193 RsgA GTPase VEJY3_14395 PF02666 Phosphatidylserine decarboxylase VEJY3_14400 PF00939 Sodium:sulfate symporter transmembrane region VEJY3_14410 PF01676 Metalloenzyme superfamily VEJY3_14410 PF06415 BPG-independent PGAM N-terminus (iPGM_N) VEJY3_14415 PF00581 Rhodanese-like domain VEJY3_14420 PF02556 Preprotein translocase subunit SecB VEJY3_14425 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus VEJY3_14425 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus VEJY3_14430 PF06426 Serine acetyltransferase, N-terminal VEJY3_14430 PF00132 Bacterial transferase hexapeptide (six repeats) VEJY3_14435 PF01551 Peptidase family M23 VEJY3_14445 PF08360 QacR-like protein, C-terminal region VEJY3_14445 PF00440 Bacterial regulatory proteins, tetR family VEJY3_14455 PF00152 tRNA synthetases class II (D, K and N) VEJY3_14460 PF02910 Fumarate reductase flavoprotein C-term VEJY3_14460 PF00890 FAD binding domain VEJY3_14465 PF13183 4Fe-4S dicluster domain VEJY3_14465 PF13085 2Fe-2S iron-sulfur cluster binding domain VEJY3_14470 PF02300 Fumarate reductase subunit C VEJY3_14475 PF02313 Fumarate reductase subunit D VEJY3_14485 PF08207 Elongation factor P (EF-P) KOW-like domain VEJY3_14485 PF09285 Elongation factor P, C-terminal VEJY3_14485 PF01132 Elongation factor P (EF-P) OB domain VEJY3_14490 PF04055 Radical SAM superfamily VEJY3_14495 PF02308 MgtC family VEJY3_14505 PF00118 TCP-1/cpn60 chaperonin family VEJY3_14510 PF00166 Chaperonin 10 Kd subunit VEJY3_14515 PF01554 MatE VEJY3_14520 PF00365 Phosphofructokinase VEJY3_14525 PF01545 Cation efflux family VEJY3_14525 PF16916 Dimerisation domain of Zinc Transporter VEJY3_14530 PF07813 LTXXQ motif family protein VEJY3_14535 PF00486 Transcriptional regulatory protein, C terminal VEJY3_14535 PF00072 Response regulator receiver domain VEJY3_14540 PF00672 HAMP domain VEJY3_14540 PF16527 Two-component sensor protein CpxA, periplasmic domain VEJY3_14540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_14540 PF00512 His Kinase A (phospho-acceptor) domain VEJY3_14545 PF00588 SpoU rRNA Methylase family VEJY3_14550 PF04186 FxsA cytoplasmic membrane protein VEJY3_14555 PF00206 Lyase VEJY3_14555 PF10415 Fumarase C C-terminus VEJY3_14560 PF03605 Anaerobic c4-dicarboxylate membrane transporter VEJY3_14565 PF11412 Disulphide bond corrector protein DsbC VEJY3_14565 PF02683 Cytochrome C biogenesis protein transmembrane region VEJY3_14570 PF00196 Bacterial regulatory proteins, luxR family VEJY3_14570 PF00072 Response regulator receiver domain VEJY3_14575 PF00999 Sodium/hydrogen exchanger family VEJY3_14575 PF02080 TrkA-C domain VEJY3_14575 PF03471 Transporter associated domain VEJY3_14585 PF00474 Sodium:solute symporter family VEJY3_14595 PF00206 Lyase VEJY3_14595 PF10415 Fumarase C C-terminus VEJY3_14600 PF00672 HAMP domain VEJY3_14600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_14600 PF00512 His Kinase A (phospho-acceptor) domain VEJY3_14600 PF01627 Hpt domain VEJY3_14600 PF00072 Response regulator receiver domain VEJY3_14605 PF12832 MFS_1 like family VEJY3_14620 PF13193 AMP-binding enzyme C-terminal domain VEJY3_14620 PF00501 AMP-binding enzyme VEJY3_14620 PF16177 Acetyl-coenzyme A synthetase N-terminus VEJY3_14625 PF01220 Dehydroquinase class II VEJY3_14630 PF00364 Biotin-requiring enzyme VEJY3_14635 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VEJY3_14635 PF02785 Biotin carboxylase C-terminal domain VEJY3_14635 PF00289 Biotin carboxylase, N-terminal domain VEJY3_14645 PF01207 Dihydrouridine synthase (Dus) VEJY3_14650 PF02954 Bacterial regulatory protein, Fis family VEJY3_14690 PF00486 Transcriptional regulatory protein, C terminal VEJY3_14690 PF18500 CadC C-terminal domain 1 VEJY3_14695 PF13411 MerR HTH family regulatory protein VEJY3_14705 PF02142 MGS-like domain VEJY3_14705 PF01808 AICARFT/IMPCHase bienzyme VEJY3_14710 PF02844 Phosphoribosylglycinamide synthetase, N domain VEJY3_14710 PF02843 Phosphoribosylglycinamide synthetase, C domain VEJY3_14710 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain VEJY3_14720 PF00216 Bacterial DNA-binding protein VEJY3_14725 PF01595 Cyclin M transmembrane N-terminal domain VEJY3_14725 PF00571 CBS domain VEJY3_14730 PF04222 Protein of unknown function (DUF416) VEJY3_14735 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VEJY3_14740 PF03167 Uracil DNA glycosylase superfamily VEJY3_14745 PF01208 Uroporphyrinogen decarboxylase (URO-D) VEJY3_14750 PF00293 NUDIX domain VEJY3_14750 PF09297 NADH pyrophosphatase zinc ribbon domain VEJY3_14755 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ VEJY3_14760 PF04983 RNA polymerase Rpb1, domain 3 VEJY3_14760 PF04997 RNA polymerase Rpb1, domain 1 VEJY3_14760 PF05000 RNA polymerase Rpb1, domain 4 VEJY3_14760 PF04998 RNA polymerase Rpb1, domain 5 VEJY3_14760 PF00623 RNA polymerase Rpb1, domain 2 VEJY3_14765 PF04565 RNA polymerase Rpb2, domain 3 VEJY3_14765 PF10385 RNA polymerase beta subunit external 1 domain VEJY3_14765 PF04561 RNA polymerase Rpb2, domain 2 VEJY3_14765 PF00562 RNA polymerase Rpb2, domain 6 VEJY3_14765 PF04560 RNA polymerase Rpb2, domain 7 VEJY3_14765 PF04563 RNA polymerase beta subunit VEJY3_14770 PF00542 Ribosomal protein L7/L12 C-terminal domain VEJY3_14770 PF16320 Ribosomal protein L7/L12 dimerisation domain VEJY3_14775 PF00466 Ribosomal protein L10 VEJY3_14780 PF00687 Ribosomal protein L1p/L10e family VEJY3_14785 PF00298 Ribosomal protein L11, RNA binding domain VEJY3_14785 PF03946 Ribosomal protein L11, N-terminal domain VEJY3_14790 PF00467 KOW motif VEJY3_14790 PF02357 Transcription termination factor nusG VEJY3_14795 PF00584 SecE/Sec61-gamma subunits of protein translocation complex VEJY3_14800 PF03143 Elongation factor Tu C-terminal domain VEJY3_14800 PF03144 Elongation factor Tu domain 2 VEJY3_14800 PF00009 Elongation factor Tu GTP binding domain VEJY3_14810 PF00485 Phosphoribulokinase / Uridine kinase family VEJY3_14815 PF02237 Biotin protein ligase C terminal domain VEJY3_14815 PF03099 Biotin/lipoate A/B protein ligase family VEJY3_14815 PF08279 HTH domain VEJY3_14820 PF01565 FAD binding domain VEJY3_14820 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain VEJY3_14830 PF13091 PLD-like domain VEJY3_14840 PF01177 Asp/Glu/Hydantoin racemase VEJY3_14850 PF00593 TonB dependent receptor VEJY3_14850 PF07715 TonB-dependent Receptor Plug Domain VEJY3_14855 PF05958 tRNA (Uracil-5-)-methyltransferase VEJY3_14865 PF00440 Bacterial regulatory proteins, tetR family VEJY3_14870 PF07992 Pyridine nucleotide-disulphide oxidoreductase VEJY3_14870 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VEJY3_14875 PF01554 MatE VEJY3_14880 PF04072 Leucine carboxyl methyltransferase VEJY3_14885 PF01726 LexA DNA binding domain VEJY3_14885 PF00717 Peptidase S24-like VEJY3_14890 PF01553 Acyltransferase VEJY3_14895 PF01040 UbiA prenyltransferase family VEJY3_14900 PF04345 Chorismate lyase VEJY3_14905 PF03748 Flagellar basal body-associated protein FliL VEJY3_14910 PF01694 Rhomboid family VEJY3_14910 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease VEJY3_14915 PF00581 Rhodanese-like domain VEJY3_14920 PF04545 Sigma-70, region 4 VEJY3_14920 PF04542 Sigma-70 region 2 VEJY3_14920 PF00140 Sigma-70 factor, region 1.2 VEJY3_14925 PF18075 FtsX extracellular domain VEJY3_14930 PF00005 ABC transporter VEJY3_14935 PF02881 SRP54-type protein, helical bundle domain VEJY3_14935 PF00448 SRP54-type protein, GTPase domain VEJY3_14935 PF02881 SRP54-type protein, helical bundle domain VEJY3_14935 PF00448 SRP54-type protein, GTPase domain VEJY3_14990 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VEJY3_14990 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VEJY3_14995 PF01022 Bacterial regulatory protein, arsR family VEJY3_15000 PF08668 HDOD domain VEJY3_15000 PF00563 EAL domain VEJY3_15005 PF01810 LysE type translocator VEJY3_15010 PF12146 Serine aminopeptidase, S33 VEJY3_15035 PF13419 Haloacid dehalogenase-like hydrolase VEJY3_15040 PF02899 Phage integrase, N-terminal SAM-like domain VEJY3_15040 PF00589 Phage integrase family VEJY3_15050 PF01678 Diaminopimelate epimerase VEJY3_15055 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain VEJY3_15055 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VEJY3_15065 PF01491 Frataxin-like domain VEJY3_15070 PF01295 Adenylate cyclase, class-I VEJY3_15070 PF12633 Adenylate cyclase NT domain VEJY3_15075 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain VEJY3_15075 PF03900 Porphobilinogen deaminase, C-terminal domain VEJY3_15080 PF02602 Uroporphyrinogen-III synthase HemD VEJY3_15085 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase VEJY3_15090 PF07219 HemY protein N-terminus VEJY3_15100 PF00175 Oxidoreductase NAD-binding domain VEJY3_15110 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase VEJY3_15120 PF07498 Rho termination factor, N-terminal domain VEJY3_15120 PF07497 Rho termination factor, RNA-binding domain VEJY3_15120 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VEJY3_15125 PF00085 Thioredoxin VEJY3_15130 PF00271 Helicase conserved C-terminal domain VEJY3_15130 PF00270 DEAD/DEAH box helicase VEJY3_15135 PF02541 Ppx/GppA phosphatase family VEJY3_15140 PF02592 Putative vitamin uptake transporter VEJY3_15150 PF09382 RQC domain VEJY3_15150 PF00270 DEAD/DEAH box helicase VEJY3_15150 PF00271 Helicase conserved C-terminal domain VEJY3_15150 PF00570 HRDC domain VEJY3_15150 PF16124 RecQ zinc-binding VEJY3_15155 PF00892 EamA-like transporter family VEJY3_15165 PF01810 LysE type translocator VEJY3_15180 PF00580 UvrD/REP helicase N-terminal domain VEJY3_15180 PF13361 UvrD-like helicase C-terminal domain VEJY3_15190 PF05114 Protein of unknown function (DUF692) VEJY3_15210 PF07690 Major Facilitator Superfamily VEJY3_15215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_15215 PF03466 LysR substrate binding domain VEJY3_15220 PF00557 Metallopeptidase family M24 VEJY3_15220 PF01321 Creatinase/Prolidase N-terminal domain VEJY3_15220 PF00557 Metallopeptidase family M24 VEJY3_15220 PF01321 Creatinase/Prolidase N-terminal domain VEJY3_15225 PF06968 Biotin and Thiamin Synthesis associated domain VEJY3_15225 PF04055 Radical SAM superfamily VEJY3_15230 PF05690 Thiazole biosynthesis protein ThiG VEJY3_15235 PF02597 ThiS family VEJY3_15240 PF00899 ThiF family VEJY3_15245 PF02581 Thiamine monophosphate synthase VEJY3_15250 PF13667 ThiC-associated domain VEJY3_15250 PF01964 Radical SAM ThiC family VEJY3_15255 PF02537 CrcB-like protein, Camphor Resistance (CrcB) VEJY3_15260 PF07732 Multicopper oxidase VEJY3_15260 PF07731 Multicopper oxidase VEJY3_15260 PF00394 Multicopper oxidase VEJY3_15265 PF00132 Bacterial transferase hexapeptide (six repeats) VEJY3_15275 PF18317 Shikimate 5'-dehydrogenase C-terminal domain VEJY3_15275 PF01488 Shikimate / quinate 5-dehydrogenase VEJY3_15275 PF08501 Shikimate dehydrogenase substrate binding domain VEJY3_15280 PF01218 Coproporphyrinogen III oxidase VEJY3_15285 PF01300 Telomere recombination VEJY3_15290 PF00731 AIR carboxylase VEJY3_15295 PF02222 ATP-grasp domain VEJY3_15295 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain VEJY3_15300 PF01396 Topoisomerase DNA binding C4 zinc finger VEJY3_15305 PF04361 Protein of unknown function (DUF494) VEJY3_15310 PF02481 DNA recombination-mediator protein A VEJY3_15310 PF17782 DprA winged helix domain VEJY3_15320 PF01327 Polypeptide deformylase VEJY3_15325 PF02911 Formyl transferase, C-terminal domain VEJY3_15325 PF00551 Formyl transferase VEJY3_15330 PF01029 NusB family VEJY3_15330 PF01189 16S rRNA methyltransferase RsmB/F VEJY3_15335 PF02080 TrkA-C domain VEJY3_15335 PF02254 TrkA-N domain VEJY3_15340 PF02386 Cation transport protein VEJY3_15350 PF03006 Haemolysin-III related VEJY3_15355 PF07070 SpoOM protein VEJY3_15365 PF06288 Protein of unknown function (DUF1040) VEJY3_15370 PF11614 IG-like fold at C-terminal of FixG, putative oxidoreductase VEJY3_15370 PF12801 4Fe-4S binding domain VEJY3_15370 PF13746 4Fe-4S dicluster domain VEJY3_15375 PF01636 Phosphotransferase enzyme family VEJY3_15380 PF01323 DSBA-like thioredoxin domain VEJY3_15385 PF01553 Acyltransferase VEJY3_15395 PF01078 Magnesium chelatase, subunit ChlI VEJY3_15395 PF13335 Magnesium chelatase, subunit ChlI C-terminal VEJY3_15400 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain VEJY3_15400 PF00205 Thiamine pyrophosphate enzyme, central domain VEJY3_15400 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain VEJY3_15410 PF00920 Dehydratase family VEJY3_15415 PF00585 C-terminal regulatory domain of Threonine dehydratase VEJY3_15415 PF00291 Pyridoxal-phosphate dependent enzyme VEJY3_15420 PF03466 LysR substrate binding domain VEJY3_15420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_15425 PF07690 Major Facilitator Superfamily VEJY3_15430 PF00497 Bacterial extracellular solute-binding proteins, family 3 VEJY3_15435 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_15440 PF12804 MobA-like NTP transferase domain VEJY3_15440 PF00132 Bacterial transferase hexapeptide (six repeats) VEJY3_15445 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain VEJY3_15445 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain VEJY3_15450 PF02874 ATP synthase alpha/beta family, beta-barrel domain VEJY3_15450 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VEJY3_15455 PF00231 ATP synthase VEJY3_15460 PF02874 ATP synthase alpha/beta family, beta-barrel domain VEJY3_15460 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VEJY3_15460 PF00306 ATP synthase alpha/beta chain, C terminal domain VEJY3_15465 PF00213 ATP synthase delta (OSCP) subunit VEJY3_15470 PF00430 ATP synthase B/B' CF(0) VEJY3_15475 PF00137 ATP synthase subunit C VEJY3_15480 PF00119 ATP synthase A chain VEJY3_15485 PF03899 ATP synthase I chain VEJY3_15490 PF17762 HTH domain found in ParB protein VEJY3_15490 PF02195 ParB-like nuclease domain VEJY3_15495 PF13614 AAA domain VEJY3_15500 PF02527 rRNA small subunit methyltransferase G VEJY3_15786 PF00005 ABC transporter VEJY3_15786 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VEJY3_15791 PF00005 ABC transporter VEJY3_15791 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VEJY3_15806 PF01709 Transcriptional regulator VEJY3_15816 PF00005 ABC transporter VEJY3_15821 PF02687 FtsX-like permease family VEJY3_15821 PF12704 MacB-like periplasmic core domain VEJY3_15836 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_15836 PF13492 GAF domain VEJY3_15836 PF07694 5TMR of 5TMR-LYT VEJY3_15836 PF06580 Histidine kinase VEJY3_15841 PF00072 Response regulator receiver domain VEJY3_15841 PF04397 LytTr DNA-binding domain VEJY3_15846 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD VEJY3_15856 PF03616 Sodium/glutamate symporter VEJY3_15866 PF00005 ABC transporter VEJY3_15881 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase VEJY3_15896 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_15896 PF03466 LysR substrate binding domain VEJY3_15901 PF17954 Quercetinase C-terminal cupin domain VEJY3_15901 PF02678 Pirin VEJY3_15906 PF07681 DoxX VEJY3_15916 PF06029 AlkA N-terminal domain VEJY3_15916 PF00730 HhH-GPD superfamily base excision DNA repair protein VEJY3_15921 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain VEJY3_15921 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain VEJY3_15926 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 VEJY3_15936 PF03600 Citrate transporter VEJY3_15956 PF08329 Chitinase A, N-terminal domain VEJY3_15956 PF00704 Glycosyl hydrolases family 18 VEJY3_15961 PF06865 Pyrimidine/purine nucleoside phosphorylase VEJY3_15971 PF00990 Diguanylate cyclase, GGDEF domain VEJY3_15971 PF00563 EAL domain VEJY3_15976 PF01554 MatE VEJY3_15981 PF00849 RNA pseudouridylate synthase VEJY3_15991 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_15991 PF03466 LysR substrate binding domain VEJY3_16001 PF00990 Diguanylate cyclase, GGDEF domain VEJY3_16001 PF17152 Periplasmic sensor domain VEJY3_16011 PF00756 Putative esterase VEJY3_16016 PF08240 Alcohol dehydrogenase GroES-like domain VEJY3_16016 PF00107 Zinc-binding dehydrogenase VEJY3_16021 PF00596 Class II Aldolase and Adducin N-terminal domain VEJY3_16031 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_16031 PF03466 LysR substrate binding domain VEJY3_16036 PF09339 IclR helix-turn-helix domain VEJY3_16036 PF01614 Bacterial transcriptional regulator VEJY3_16046 PF10688 Bacterial inner membrane protein VEJY3_16056 PF00294 pfkB family carbohydrate kinase VEJY3_16061 PF01081 KDPG and KHG aldolase VEJY3_16066 PF04954 Siderophore-interacting protein VEJY3_16066 PF08021 Siderophore-interacting FAD-binding domain VEJY3_16071 PF01810 LysE type translocator VEJY3_16076 PF01037 Lrp/AsnC ligand binding domain VEJY3_16091 PF03922 OmpW family VEJY3_16101 PF12706 Beta-lactamase superfamily domain VEJY3_16106 PF01661 Macro domain VEJY3_16111 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VEJY3_16141 PF05651 Putative sugar diacid recognition VEJY3_16141 PF17853 GGDEF-like domain VEJY3_16141 PF13556 PucR C-terminal helix-turn-helix domain VEJY3_16146 PF02447 GntP family permease VEJY3_16151 PF02595 Glycerate kinase family VEJY3_16166 PF03264 NapC/NirT cytochrome c family, N-terminal region VEJY3_16171 PF00384 Molybdopterin oxidoreductase VEJY3_16171 PF18364 Molybdopterin oxidoreductase N-terminal domain VEJY3_16171 PF01568 Molydopterin dinucleotide binding domain VEJY3_16181 PF02581 Thiamine monophosphate synthase VEJY3_16186 PF02110 Hydroxyethylthiazole kinase family VEJY3_16191 PF03070 TENA/THI-4/PQQC family VEJY3_16196 PF09084 NMT1/THI5 like VEJY3_16201 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_16206 PF00005 ABC transporter VEJY3_16211 PF08543 Phosphomethylpyrimidine kinase VEJY3_16216 PF01523 Putative modulator of DNA gyrase VEJY3_16221 PF01523 Putative modulator of DNA gyrase VEJY3_16226 PF04013 Putative SAM-dependent RNA methyltransferase VEJY3_16246 PF10928 Protein of unknown function (DUF2810) VEJY3_16251 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain VEJY3_16251 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain VEJY3_16261 PF03009 Glycerophosphoryl diester phosphodiesterase family VEJY3_16271 PF00486 Transcriptional regulatory protein, C terminal VEJY3_16271 PF00072 Response regulator receiver domain VEJY3_16276 PF00512 His Kinase A (phospho-acceptor) domain VEJY3_16276 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_16276 PF00672 HAMP domain VEJY3_16281 PF07715 TonB-dependent Receptor Plug Domain VEJY3_16281 PF00593 TonB dependent receptor VEJY3_16291 PF01618 MotA/TolQ/ExbB proton channel family VEJY3_16296 PF01618 MotA/TolQ/ExbB proton channel family VEJY3_16301 PF02472 Biopolymer transport protein ExbD/TolR VEJY3_16321 PF00326 Prolyl oligopeptidase family VEJY3_16321 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain VEJY3_16326 PF07690 Major Facilitator Superfamily VEJY3_16331 PF00491 Arginase family VEJY3_16336 PF17810 Arginine decarboxylase helical bundle domain VEJY3_16336 PF17944 Arginine decarboxylase C-terminal helical extension VEJY3_16336 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VEJY3_16341 PF00753 Metallo-beta-lactamase superfamily VEJY3_16346 PF08443 RimK-like ATP-grasp domain VEJY3_16346 PF18030 RimK PreATP-grasp domain VEJY3_16351 PF08443 RimK-like ATP-grasp domain VEJY3_16351 PF18030 RimK PreATP-grasp domain VEJY3_16376 PF00990 Diguanylate cyclase, GGDEF domain VEJY3_16381 PF05525 Branched-chain amino acid transport protein VEJY3_16391 PF01266 FAD dependent oxidoreductase VEJY3_16401 PF07670 Nucleoside recognition VEJY3_16401 PF07662 Na+ dependent nucleoside transporter C-terminus VEJY3_16401 PF01773 Na+ dependent nucleoside transporter N-terminus VEJY3_16416 PF00990 Diguanylate cyclase, GGDEF domain VEJY3_16416 PF03707 Bacterial signalling protein N terminal repeat VEJY3_16416 PF00563 EAL domain VEJY3_16431 PF00990 Diguanylate cyclase, GGDEF domain VEJY3_16436 PF04244 Deoxyribodipyrimidine photo-lyase-related protein VEJY3_16451 PF01641 SelR domain VEJY3_16451 PF01625 Peptide methionine sulfoxide reductase VEJY3_16456 PF02566 OsmC-like protein VEJY3_16461 PF14602 Hexapeptide repeat of succinyl-transferase VEJY3_16461 PF12464 Maltose acetyltransferase VEJY3_16466 PF05656 Protein of unknown function (DUF805) VEJY3_16486 PF00005 ABC transporter VEJY3_16491 PF01979 Amidohydrolase family VEJY3_16501 PF03466 LysR substrate binding domain VEJY3_16501 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_16506 PF13419 Haloacid dehalogenase-like hydrolase VEJY3_16521 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VEJY3_16526 PF02687 FtsX-like permease family VEJY3_16526 PF12704 MacB-like periplasmic core domain VEJY3_16526 PF00005 ABC transporter VEJY3_16531 PF02321 Outer membrane efflux protein VEJY3_16536 PF00657 GDSL-like Lipase/Acylhydrolase VEJY3_16551 PF13419 Haloacid dehalogenase-like hydrolase VEJY3_16561 PF00266 Aminotransferase class-V VEJY3_16571 PF00583 Acetyltransferase (GNAT) family VEJY3_16571 PF01047 MarR family VEJY3_16576 PF00005 ABC transporter VEJY3_16581 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_16586 PF07702 UTRA domain VEJY3_16586 PF00392 Bacterial regulatory proteins, gntR family VEJY3_16596 PF01266 FAD dependent oxidoreductase VEJY3_16601 PF18027 Cytosolic carboxypeptidase N-terminal domain VEJY3_16601 PF00246 Zinc carboxypeptidase VEJY3_16606 PF00691 OmpA family VEJY3_16606 PF01389 OmpA-like transmembrane domain VEJY3_16611 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_16611 PF03466 LysR substrate binding domain VEJY3_16616 PF03315 Serine dehydratase beta chain VEJY3_16616 PF03313 Serine dehydratase alpha chain VEJY3_16636 PF08264 Anticodon-binding domain of tRNA VEJY3_16636 PF00133 tRNA synthetases class I (I, L, M and V) VEJY3_16651 PF01070 FMN-dependent dehydrogenase VEJY3_16676 PF00581 Rhodanese-like domain VEJY3_16681 PF00166 Chaperonin 10 Kd subunit VEJY3_16686 PF00118 TCP-1/cpn60 chaperonin family VEJY3_16691 PF01810 LysE type translocator VEJY3_16696 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_16696 PF03466 LysR substrate binding domain VEJY3_16706 PF12833 Helix-turn-helix domain VEJY3_16711 PF06751 Ethanolamine ammonia lyase large subunit (EutB) VEJY3_16716 PF05985 Ethanolamine ammonia-lyase light chain (EutC) VEJY3_16721 PF13520 Amino acid permease VEJY3_16726 PF01625 Peptide methionine sulfoxide reductase VEJY3_16726 PF01641 SelR domain VEJY3_16736 PF00857 Isochorismatase family VEJY3_16746 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family VEJY3_16746 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain VEJY3_16761 PF00892 EamA-like transporter family VEJY3_16766 PF03466 LysR substrate binding domain VEJY3_16766 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_16771 PF17185 NlpE C-terminal OB domain VEJY3_16771 PF04170 NlpE N-terminal domain VEJY3_16776 PF02001 Protein of unknown function DUF134 VEJY3_16796 PF03144 Elongation factor Tu domain 2 VEJY3_16796 PF00009 Elongation factor Tu GTP binding domain VEJY3_16796 PF00679 Elongation factor G C-terminus VEJY3_16796 PF14492 Elongation Factor G, domain II VEJY3_16796 PF03764 Elongation factor G, domain IV VEJY3_16801 PF02264 LamB porin VEJY3_16801 PF11471 Maltoporin periplasmic N-terminal extension VEJY3_16811 PF09278 MerR, DNA binding VEJY3_16811 PF00376 MerR family regulatory protein VEJY3_16831 PF13091 PLD-like domain VEJY3_16836 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VEJY3_16836 PF00529 HlyD membrane-fusion protein of T1SS VEJY3_16841 PF00873 AcrB/AcrD/AcrF family VEJY3_16856 PF08402 TOBE domain VEJY3_16856 PF00005 ABC transporter VEJY3_16881 PF07702 UTRA domain VEJY3_16881 PF00392 Bacterial regulatory proteins, gntR family VEJY3_16886 PF02028 BCCT, betaine/carnitine/choline family transporter VEJY3_16906 PF00873 AcrB/AcrD/AcrF family VEJY3_16916 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_16916 PF03466 LysR substrate binding domain VEJY3_16921 PF13416 Bacterial extracellular solute-binding protein VEJY3_16926 PF00579 tRNA synthetases class I (W and Y) VEJY3_16931 PF00196 Bacterial regulatory proteins, luxR family VEJY3_16941 PF02896 PEP-utilising enzyme, TIM barrel domain VEJY3_16941 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain VEJY3_16941 PF00391 PEP-utilising enzyme, mobile domain VEJY3_16946 PF03618 Kinase/pyrophosphorylase VEJY3_16956 PF03466 LysR substrate binding domain VEJY3_16956 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_16966 PF00501 AMP-binding enzyme VEJY3_16966 PF13193 AMP-binding enzyme C-terminal domain VEJY3_16971 PF00512 His Kinase A (phospho-acceptor) domain VEJY3_16971 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_16971 PF00989 PAS fold VEJY3_16976 PF00072 Response regulator receiver domain VEJY3_16976 PF00196 Bacterial regulatory proteins, luxR family VEJY3_16981 PF07690 Major Facilitator Superfamily VEJY3_16986 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_16986 PF03466 LysR substrate binding domain VEJY3_16996 PF00892 EamA-like transporter family VEJY3_17006 PF00392 Bacterial regulatory proteins, gntR family VEJY3_17006 PF07702 UTRA domain VEJY3_17011 PF00367 phosphotransferase system, EIIB VEJY3_17011 PF02378 Phosphotransferase system, EIIC VEJY3_17016 PF11975 Family 4 glycosyl hydrolase C-terminal domain VEJY3_17016 PF02056 Family 4 glycosyl hydrolase VEJY3_17021 PF17876 Cold shock domain VEJY3_17021 PF08461 Ribonuclease R winged-helix domain VEJY3_17021 PF00575 S1 RNA binding domain VEJY3_17021 PF00773 RNB domain VEJY3_17021 PF08206 Ribonuclease B OB domain VEJY3_17026 PF00313 'Cold-shock' DNA-binding domain VEJY3_17036 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_17036 PF03466 LysR substrate binding domain VEJY3_17041 PF00155 Aminotransferase class I and II VEJY3_17046 PF00497 Bacterial extracellular solute-binding proteins, family 3 VEJY3_17056 PF00860 Permease family VEJY3_17066 PF00576 HIUase/Transthyretin family VEJY3_17086 PF00111 2Fe-2S iron-sulfur cluster binding domain VEJY3_17086 PF01799 [2Fe-2S] binding domain VEJY3_17091 PF08362 YcdC-like protein, C-terminal region VEJY3_17091 PF00440 Bacterial regulatory proteins, tetR family VEJY3_17096 PF03358 NADPH-dependent FMN reductase VEJY3_17121 PF00072 Response regulator receiver domain VEJY3_17121 PF12431 Transcriptional regulator VEJY3_17126 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_17126 PF17203 Single cache domain 3 VEJY3_17131 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit VEJY3_17136 PF00364 Biotin-requiring enzyme VEJY3_17136 PF02436 Conserved carboxylase domain VEJY3_17136 PF00682 HMGL-like VEJY3_17141 PF04277 Oxaloacetate decarboxylase, gamma chain VEJY3_17146 PF03390 2-hydroxycarboxylate transporter family VEJY3_17151 PF08218 Citrate lyase ligase C-terminal domain VEJY3_17156 PF06857 Malonate decarboxylase delta subunit (MdcD) VEJY3_17161 PF03328 HpcH/HpaI aldolase/citrate lyase family VEJY3_17166 PF04223 Citrate lyase, alpha subunit (CitF) VEJY3_17171 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase VEJY3_17176 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase VEJY3_17186 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_17186 PF03466 LysR substrate binding domain VEJY3_17191 PF00221 Aromatic amino acid lyase VEJY3_17196 PF17391 Urocanase N-terminal domain VEJY3_17196 PF17392 Urocanase C-terminal domain VEJY3_17196 PF01175 Urocanase Rossmann-like domain VEJY3_17201 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) VEJY3_17206 PF00202 Aminotransferase class-III VEJY3_17211 PF00171 Aldehyde dehydrogenase family VEJY3_17216 PF01037 Lrp/AsnC ligand binding domain VEJY3_17221 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family VEJY3_17226 PF01321 Creatinase/Prolidase N-terminal domain VEJY3_17226 PF00557 Metallopeptidase family M24 VEJY3_17231 PF00356 Bacterial regulatory proteins, lacI family VEJY3_17236 PF13419 Haloacid dehalogenase-like hydrolase VEJY3_17241 PF00232 Glycosyl hydrolase family 1 VEJY3_17246 PF02378 Phosphotransferase system, EIIC VEJY3_17246 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 VEJY3_17246 PF00367 phosphotransferase system, EIIB VEJY3_17251 PF00232 Glycosyl hydrolase family 1 VEJY3_17271 PF00107 Zinc-binding dehydrogenase VEJY3_17271 PF08240 Alcohol dehydrogenase GroES-like domain VEJY3_17276 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_17276 PF03466 LysR substrate binding domain VEJY3_17286 PF00271 Helicase conserved C-terminal domain VEJY3_17286 PF00270 DEAD/DEAH box helicase VEJY3_17296 PF03099 Biotin/lipoate A/B protein ligase family VEJY3_17326 PF02798 Glutathione S-transferase, N-terminal domain VEJY3_17336 PF08534 Redoxin VEJY3_17336 PF00462 Glutaredoxin VEJY3_17341 PF00962 Adenosine/AMP deaminase VEJY3_17356 PF00313 'Cold-shock' DNA-binding domain VEJY3_17361 PF02678 Pirin VEJY3_17361 PF05726 Pirin C-terminal cupin domain VEJY3_17366 PF01734 Patatin-like phospholipase VEJY3_17376 PF01047 MarR family VEJY3_17381 PF03733 Inner membrane component domain VEJY3_17386 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VEJY3_17391 PF00884 Sulfatase VEJY3_17391 PF08019 Phosphoethanolamine transferase EptA/EptB VEJY3_17396 PF01219 Prokaryotic diacylglycerol kinase VEJY3_17411 PF01323 DSBA-like thioredoxin domain VEJY3_17421 PF00255 Glutathione peroxidase VEJY3_17426 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase VEJY3_17446 PF01966 HD domain VEJY3_17451 PF03448 MgtE intracellular N domain VEJY3_17451 PF00571 CBS domain VEJY3_17451 PF01769 Divalent cation transporter VEJY3_17456 PF03109 ABC1 family VEJY3_17466 PF00155 Aminotransferase class I and II VEJY3_17466 PF00392 Bacterial regulatory proteins, gntR family VEJY3_17471 PF13520 Amino acid permease VEJY3_17476 PF01037 Lrp/AsnC ligand binding domain VEJY3_17476 PF13404 AsnC-type helix-turn-helix domain VEJY3_17481 PF03466 LysR substrate binding domain VEJY3_17481 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_17496 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain VEJY3_17496 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain VEJY3_17501 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VEJY3_17506 PF01554 MatE VEJY3_17511 PF04363 Protein of unknown function (DUF496) VEJY3_17521 PF04337 Protein of unknown function, DUF480 VEJY3_17526 PF01541 GIY-YIG catalytic domain VEJY3_17531 PF13407 Periplasmic binding protein domain VEJY3_17536 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_17536 PF00072 Response regulator receiver domain VEJY3_17536 PF09308 LuxQ, periplasmic VEJY3_17536 PF00512 His Kinase A (phospho-acceptor) domain VEJY3_17546 PF00529 HlyD membrane-fusion protein of T1SS VEJY3_17546 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VEJY3_17566 PF01037 Lrp/AsnC ligand binding domain VEJY3_17586 PF13721 SecD export protein N-terminal TM region VEJY3_17586 PF07549 SecD/SecF GG Motif VEJY3_17586 PF02355 Protein export membrane protein VEJY3_17591 PF02355 Protein export membrane protein VEJY3_17591 PF07549 SecD/SecF GG Motif VEJY3_17596 PF01810 LysE type translocator VEJY3_17601 PF00106 short chain dehydrogenase VEJY3_17606 PF00108 Thiolase, N-terminal domain VEJY3_17606 PF02803 Thiolase, C-terminal domain VEJY3_17616 PF07167 Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus VEJY3_17616 PF00561 alpha/beta hydrolase fold VEJY3_17626 PF03264 NapC/NirT cytochrome c family, N-terminal region VEJY3_17631 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) VEJY3_17636 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VEJY3_17636 PF00384 Molybdopterin oxidoreductase VEJY3_17636 PF01568 Molydopterin dinucleotide binding domain VEJY3_17646 PF12838 4Fe-4S dicluster domain VEJY3_17646 PF13187 4Fe-4S dicluster domain VEJY3_17651 PF00672 HAMP domain VEJY3_17651 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_17651 PF07730 Histidine kinase VEJY3_17651 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term VEJY3_17656 PF00072 Response regulator receiver domain VEJY3_17656 PF00196 Bacterial regulatory proteins, luxR family VEJY3_17671 PF01546 Peptidase family M20/M25/M40 VEJY3_17671 PF07687 Peptidase dimerisation domain VEJY3_17676 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VEJY3_17681 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VEJY3_17686 PF00873 AcrB/AcrD/AcrF family VEJY3_17691 PF00672 HAMP domain VEJY3_17691 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VEJY3_17691 PF12729 Four helix bundle sensory module for signal transduction VEJY3_17696 PF00472 RF-1 domain VEJY3_17701 PF13419 Haloacid dehalogenase-like hydrolase VEJY3_17706 PF00691 OmpA family VEJY3_17706 PF01389 OmpA-like transmembrane domain VEJY3_17711 PF00793 DAHP synthetase I family VEJY3_17716 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VEJY3_17716 PF08447 PAS fold VEJY3_17721 PF02779 Transketolase, pyrimidine binding domain VEJY3_17721 PF02780 Transketolase, C-terminal domain VEJY3_17721 PF00456 Transketolase, thiamine diphosphate binding domain VEJY3_17726 PF00923 Transaldolase/Fructose-6-phosphate aldolase VEJY3_17736 PF16868 NMT1-like family VEJY3_17746 PF00581 Rhodanese-like domain VEJY3_17756 PF00899 ThiF family VEJY3_17761 PF03453 MoeA N-terminal region (domain I and II) VEJY3_17761 PF03454 MoeA C-terminal region (domain IV) VEJY3_17761 PF00994 Probable molybdopterin binding domain VEJY3_17766 PF01227 GTP cyclohydrolase I VEJY3_17776 PF00654 Voltage gated chloride channel VEJY3_17791 PF00248 Aldo/keto reductase family VEJY3_17796 PF01256 Carbohydrate kinase VEJY3_17796 PF03853 YjeF-related protein N-terminus VEJY3_17801 PF00478 IMP dehydrogenase / GMP reductase domain VEJY3_17806 PF02899 Phage integrase, N-terminal SAM-like domain VEJY3_17806 PF00589 Phage integrase family VEJY3_17811 PF03466 LysR substrate binding domain VEJY3_17811 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_17816 PF12146 Serine aminopeptidase, S33 VEJY3_17836 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VEJY3_17841 PF06772 Bacterial low temperature requirement A protein (LtrA) VEJY3_17846 PF12146 Serine aminopeptidase, S33 VEJY3_17851 PF12146 Serine aminopeptidase, S33 VEJY3_17861 PF12833 Helix-turn-helix domain VEJY3_17861 PF06719 AraC-type transcriptional regulator N-terminus VEJY3_17866 PF09339 IclR helix-turn-helix domain VEJY3_17866 PF01614 Bacterial transcriptional regulator VEJY3_17871 PF12146 Serine aminopeptidase, S33 VEJY3_17876 PF00108 Thiolase, N-terminal domain VEJY3_17876 PF02803 Thiolase, C-terminal domain VEJY3_17881 PF01144 Coenzyme A transferase VEJY3_17886 PF01144 Coenzyme A transferase VEJY3_17891 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_17891 PF03466 LysR substrate binding domain VEJY3_17896 PF13378 Enolase C-terminal domain-like VEJY3_17896 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain VEJY3_17901 PF02426 Muconolactone delta-isomerase VEJY3_17906 PF04444 Catechol dioxygenase N terminus VEJY3_17906 PF00775 Dioxygenase VEJY3_17911 PF00848 Ring hydroxylating alpha subunit (catalytic domain) VEJY3_17911 PF00355 Rieske [2Fe-2S] domain VEJY3_17916 PF00866 Ring hydroxylating beta subunit VEJY3_17921 PF00970 Oxidoreductase FAD-binding domain VEJY3_17921 PF00111 2Fe-2S iron-sulfur cluster binding domain VEJY3_17921 PF00175 Oxidoreductase NAD-binding domain VEJY3_17926 PF00106 short chain dehydrogenase VEJY3_17931 PF07690 Major Facilitator Superfamily VEJY3_17936 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_17936 PF03466 LysR substrate binding domain VEJY3_17941 PF07687 Peptidase dimerisation domain VEJY3_17941 PF01546 Peptidase family M20/M25/M40 VEJY3_17946 PF03606 C4-dicarboxylate anaerobic carrier VEJY3_17956 PF02423 Ornithine cyclodeaminase/mu-crystallin family VEJY3_17981 PF10114 Sensory domain found in PocR VEJY3_17981 PF12833 Helix-turn-helix domain VEJY3_17996 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_17996 PF03466 LysR substrate binding domain VEJY3_18001 PF01266 FAD dependent oxidoreductase VEJY3_18006 PF08943 CsiD VEJY3_18021 PF03466 LysR substrate binding domain VEJY3_18021 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_18031 PF00912 Transglycosylase VEJY3_18031 PF14814 Bifunctional transglycosylase second domain VEJY3_18031 PF00905 Penicillin binding protein transpeptidase domain VEJY3_18036 PF00248 Aldo/keto reductase family VEJY3_18041 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VEJY3_18051 PF03466 LysR substrate binding domain VEJY3_18051 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_18056 PF03480 Bacterial extracellular solute-binding protein, family 7 VEJY3_18066 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VEJY3_18076 PF01261 Xylose isomerase-like TIM barrel VEJY3_18081 PF01220 Dehydroquinase class II VEJY3_18086 PF18317 Shikimate 5'-dehydrogenase C-terminal domain VEJY3_18086 PF08501 Shikimate dehydrogenase substrate binding domain VEJY3_18091 PF04909 Amidohydrolase VEJY3_18096 PF03737 Aldolase/RraA VEJY3_18101 PF04303 PrpF protein VEJY3_18106 PF04909 Amidohydrolase VEJY3_18116 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase VEJY3_18126 PF00196 Bacterial regulatory proteins, luxR family VEJY3_18126 PF00072 Response regulator receiver domain VEJY3_18136 PF01494 FAD binding domain VEJY3_18146 PF12706 Beta-lactamase superfamily domain VEJY3_18151 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VEJY3_18161 PF03480 Bacterial extracellular solute-binding protein, family 7 VEJY3_18176 PF00005 ABC transporter VEJY3_18176 PF00664 ABC transporter transmembrane region VEJY3_18181 PF00664 ABC transporter transmembrane region VEJY3_18181 PF00005 ABC transporter VEJY3_18186 PF13533 Biotin-lipoyl like VEJY3_18226 PF00132 Bacterial transferase hexapeptide (six repeats) VEJY3_18246 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_18246 PF03466 LysR substrate binding domain VEJY3_18251 PF00795 Carbon-nitrogen hydrolase VEJY3_18256 PF01979 Amidohydrolase family VEJY3_18261 PF00248 Aldo/keto reductase family VEJY3_18266 PF00455 DeoR C terminal sensor domain VEJY3_18266 PF08220 DeoR-like helix-turn-helix domain VEJY3_18271 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VEJY3_18271 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VEJY3_18276 PF07005 Sugar-binding N-terminal domain VEJY3_18276 PF17042 Nucleotide-binding C-terminal domain VEJY3_18281 PF00596 Class II Aldolase and Adducin N-terminal domain VEJY3_18286 PF01261 Xylose isomerase-like TIM barrel VEJY3_18291 PF02447 GntP family permease VEJY3_18296 PF02540 NAD synthase VEJY3_18296 PF00795 Carbon-nitrogen hydrolase VEJY3_18321 PF01875 Memo-like protein VEJY3_18336 PF00149 Calcineurin-like phosphoesterase VEJY3_18341 PF03466 LysR substrate binding domain VEJY3_18341 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_18346 PF07690 Major Facilitator Superfamily VEJY3_18351 PF00892 EamA-like transporter family VEJY3_18356 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VEJY3_18361 PF14602 Hexapeptide repeat of succinyl-transferase VEJY3_18361 PF12464 Maltose acetyltransferase VEJY3_18371 PF03466 LysR substrate binding domain VEJY3_18371 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_18381 PF00072 Response regulator receiver domain VEJY3_18381 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_18381 PF01627 Hpt domain VEJY3_18381 PF00497 Bacterial extracellular solute-binding proteins, family 3 VEJY3_18381 PF00989 PAS fold VEJY3_18381 PF00512 His Kinase A (phospho-acceptor) domain VEJY3_18386 PF01012 Electron transfer flavoprotein domain VEJY3_18386 PF00766 Electron transfer flavoprotein FAD-binding domain VEJY3_18391 PF01012 Electron transfer flavoprotein domain VEJY3_18401 PF00005 ABC transporter VEJY3_18401 PF12399 Branched-chain amino acid ATP-binding cassette transporter VEJY3_18426 PF00005 ABC transporter VEJY3_18431 PF00501 AMP-binding enzyme VEJY3_18431 PF14535 AMP-binding enzyme C-terminal domain VEJY3_18446 PF00034 Cytochrome c VEJY3_18456 PF12794 Mechanosensitive ion channel inner membrane domain 1 VEJY3_18456 PF12795 Mechanosensitive ion channel porin domain VEJY3_18456 PF00924 Mechanosensitive ion channel VEJY3_18461 PF03060 Nitronate monooxygenase VEJY3_18466 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_18466 PF03466 LysR substrate binding domain VEJY3_18471 PF00497 Bacterial extracellular solute-binding proteins, family 3 VEJY3_18476 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_18481 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_18491 PF13378 Enolase C-terminal domain-like VEJY3_18491 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain VEJY3_18501 PF01717 Cobalamin-independent synthase, Catalytic domain VEJY3_18501 PF08267 Cobalamin-independent synthase, N-terminal domain VEJY3_18521 PF00682 HMGL-like VEJY3_18526 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain VEJY3_18526 PF02785 Biotin carboxylase C-terminal domain VEJY3_18526 PF00289 Biotin carboxylase, N-terminal domain VEJY3_18526 PF00364 Biotin-requiring enzyme VEJY3_18531 PF00378 Enoyl-CoA hydratase/isomerase VEJY3_18536 PF01039 Carboxyl transferase domain VEJY3_18541 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VEJY3_18541 PF02770 Acyl-CoA dehydrogenase, middle domain VEJY3_18541 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VEJY3_18546 PF09278 MerR, DNA binding VEJY3_18546 PF00376 MerR family regulatory protein VEJY3_18551 PF00108 Thiolase, N-terminal domain VEJY3_18551 PF02803 Thiolase, C-terminal domain VEJY3_18556 PF00171 Aldehyde dehydrogenase family VEJY3_18561 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VEJY3_18561 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VEJY3_18561 PF02770 Acyl-CoA dehydrogenase, middle domain VEJY3_18566 PF00378 Enoyl-CoA hydratase/isomerase VEJY3_18576 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VEJY3_18576 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VEJY3_18586 PF00440 Bacterial regulatory proteins, tetR family VEJY3_18586 PF13977 BetI-type transcriptional repressor, C-terminal VEJY3_18591 PF00171 Aldehyde dehydrogenase family VEJY3_18596 PF05199 GMC oxidoreductase VEJY3_18596 PF00732 GMC oxidoreductase VEJY3_18601 PF04069 Substrate binding domain of ABC-type glycine betaine transport system VEJY3_18606 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_18611 PF00005 ABC transporter VEJY3_18611 PF00571 CBS domain VEJY3_18616 PF01145 SPFH domain / Band 7 family VEJY3_18616 PF16200 C-terminal region of band_7 VEJY3_18626 PF00990 Diguanylate cyclase, GGDEF domain VEJY3_18626 PF13188 PAS domain VEJY3_18626 PF03707 Bacterial signalling protein N terminal repeat VEJY3_18626 PF00563 EAL domain VEJY3_18646 PF04116 Fatty acid hydroxylase superfamily VEJY3_18651 PF01915 Glycosyl hydrolase family 3 C-terminal domain VEJY3_18651 PF00933 Glycosyl hydrolase family 3 N terminal domain VEJY3_18651 PF14310 Fibronectin type III-like domain VEJY3_18656 PF12833 Helix-turn-helix domain VEJY3_18661 PF00072 Response regulator receiver domain VEJY3_18661 PF00196 Bacterial regulatory proteins, luxR family VEJY3_18666 PF03793 PASTA domain VEJY3_18666 PF00069 Protein kinase domain VEJY3_18671 PF07690 Major Facilitator Superfamily VEJY3_18681 PF04324 BFD-like [2Fe-2S] binding domain VEJY3_18681 PF18267 Rubredoxin NAD+ reductase C-terminal domain VEJY3_18681 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VEJY3_18681 PF07992 Pyridine nucleotide-disulphide oxidoreductase VEJY3_18681 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VEJY3_18691 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VEJY3_18691 PF04324 BFD-like [2Fe-2S] binding domain VEJY3_18691 PF01568 Molydopterin dinucleotide binding domain VEJY3_18691 PF00384 Molybdopterin oxidoreductase VEJY3_18696 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family VEJY3_18701 PF00148 Nitrogenase component 1 type Oxidoreductase VEJY3_18706 PF00148 Nitrogenase component 1 type Oxidoreductase VEJY3_18706 PF11844 Domain of unknown function (DUF3364) VEJY3_18716 PF02579 Dinitrogenase iron-molybdenum cofactor VEJY3_18716 PF16844 Dinitrogenase iron-molybdenum cofactor, N-terminal VEJY3_18721 PF00148 Nitrogenase component 1 type Oxidoreductase VEJY3_18726 PF00148 Nitrogenase component 1 type Oxidoreductase VEJY3_18731 PF02579 Dinitrogenase iron-molybdenum cofactor VEJY3_18741 PF04324 BFD-like [2Fe-2S] binding domain VEJY3_18741 PF01592 NifU-like N terminal domain VEJY3_18741 PF01106 NifU-like domain VEJY3_18746 PF00266 Aminotransferase class-V VEJY3_18751 PF00682 HMGL-like VEJY3_18761 PF04319 NifZ domain VEJY3_18766 PF00639 PPIC-type PPIASE domain VEJY3_18776 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_18781 PF00005 ABC transporter VEJY3_18781 PF03459 TOBE domain VEJY3_18791 PF00892 EamA-like transporter family VEJY3_18801 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_18801 PF03466 LysR substrate binding domain VEJY3_18811 PF01202 Shikimate kinase VEJY3_18816 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VEJY3_18826 PF03480 Bacterial extracellular solute-binding protein, family 7 VEJY3_18831 PF01810 LysE type translocator VEJY3_18841 PF09905 DNA-binding protein VF530 VEJY3_18846 PF00313 'Cold-shock' DNA-binding domain VEJY3_18851 PF04891 NifQ VEJY3_18856 PF12838 4Fe-4S dicluster domain VEJY3_18861 PF04055 Radical SAM superfamily VEJY3_18861 PF02579 Dinitrogenase iron-molybdenum cofactor VEJY3_18866 PF02954 Bacterial regulatory protein, Fis family VEJY3_18866 PF00158 Sigma-54 interaction domain VEJY3_18866 PF13185 GAF domain VEJY3_18871 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_18871 PF00989 PAS fold VEJY3_18876 PF02508 Rnf-Nqr subunit, membrane protein VEJY3_18881 PF04060 Putative Fe-S cluster VEJY3_18886 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit VEJY3_18886 PF13375 RnfC Barrel sandwich hybrid domain VEJY3_18886 PF10531 SLBB domain VEJY3_18886 PF13237 4Fe-4S dicluster domain VEJY3_18891 PF03116 NQR2, RnfD, RnfE family VEJY3_18896 PF04205 FMN-binding domain VEJY3_18901 PF02508 Rnf-Nqr subunit, membrane protein VEJY3_18906 PF03658 RnfH family Ubiquitin VEJY3_18911 PF00258 Flavodoxin VEJY3_18941 PF00563 EAL domain VEJY3_18941 PF00990 Diguanylate cyclase, GGDEF domain VEJY3_18946 PF05025 RbsD / FucU transport protein family VEJY3_18951 PF00005 ABC transporter VEJY3_18956 PF02653 Branched-chain amino acid transport system / permease component VEJY3_18961 PF13407 Periplasmic binding protein domain VEJY3_18966 PF00294 pfkB family carbohydrate kinase VEJY3_18971 PF00356 Bacterial regulatory proteins, lacI family VEJY3_18976 PF13411 MerR HTH family regulatory protein VEJY3_18991 PF12805 FUSC-like inner membrane protein yccS VEJY3_18996 PF00580 UvrD/REP helicase N-terminal domain VEJY3_18996 PF12462 DNA helicase IV / RNA helicase N terminal VEJY3_18996 PF13361 UvrD-like helicase C-terminal domain VEJY3_19001 PF02142 MGS-like domain VEJY3_19006 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VEJY3_19011 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_19011 PF00072 Response regulator receiver domain VEJY3_19011 PF01627 Hpt domain VEJY3_19011 PF00672 HAMP domain VEJY3_19011 PF00512 His Kinase A (phospho-acceptor) domain VEJY3_19026 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_19026 PF03466 LysR substrate binding domain VEJY3_19031 PF16385 Domain of unknown function VEJY3_19031 PF00884 Sulfatase VEJY3_19036 PF04055 Radical SAM superfamily VEJY3_19036 PF13186 Iron-sulfur cluster-binding domain VEJY3_19041 PF07726 ATPase family associated with various cellular activities (AAA) VEJY3_19041 PF17863 AAA lid domain VEJY3_19056 PF00092 von Willebrand factor type A domain VEJY3_19071 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region VEJY3_19071 PF01872 RibD C-terminal domain VEJY3_19076 PF00781 Diacylglycerol kinase catalytic domain VEJY3_19081 PF18081 Fanconi anemia-associated nuclease SAP domain VEJY3_19081 PF08774 VRR-NUC domain VEJY3_19086 PF07690 Major Facilitator Superfamily VEJY3_19096 PF01435 Peptidase family M48 VEJY3_19101 PF04011 LemA family VEJY3_19106 PF03606 C4-dicarboxylate anaerobic carrier VEJY3_19116 PF00583 Acetyltransferase (GNAT) family VEJY3_19116 PF00814 Glycoprotease family VEJY3_19121 PF00072 Response regulator receiver domain VEJY3_19121 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_19126 PF01926 50S ribosome-binding GTPase VEJY3_19131 PF00072 Response regulator receiver domain VEJY3_19131 PF09456 RcsC Alpha-Beta-Loop (ABL) VEJY3_19131 PF00512 His Kinase A (phospho-acceptor) domain VEJY3_19131 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_19136 PF00563 EAL domain VEJY3_19136 PF00990 Diguanylate cyclase, GGDEF domain VEJY3_19136 PF03707 Bacterial signalling protein N terminal repeat VEJY3_19136 PF13188 PAS domain VEJY3_19141 PF00072 Response regulator receiver domain VEJY3_19141 PF00196 Bacterial regulatory proteins, luxR family VEJY3_19146 PF00990 Diguanylate cyclase, GGDEF domain VEJY3_19156 PF00072 Response regulator receiver domain VEJY3_19156 PF00196 Bacterial regulatory proteins, luxR family VEJY3_19186 PF00892 EamA-like transporter family VEJY3_19201 PF00939 Sodium:sulfate symporter transmembrane region VEJY3_19211 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_19211 PF00989 PAS fold VEJY3_19211 PF17203 Single cache domain 3 VEJY3_19211 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain VEJY3_19216 PF00072 Response regulator receiver domain VEJY3_19216 PF12431 Transcriptional regulator VEJY3_19226 PF01645 Conserved region in glutamate synthase VEJY3_19231 PF00141 Peroxidase VEJY3_19256 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VEJY3_19266 PF03480 Bacterial extracellular solute-binding protein, family 7 VEJY3_19271 PF17200 Single Cache domain 2 VEJY3_19271 PF07730 Histidine kinase VEJY3_19276 PF00196 Bacterial regulatory proteins, luxR family VEJY3_19276 PF00072 Response regulator receiver domain VEJY3_19281 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_19281 PF03466 LysR substrate binding domain VEJY3_19286 PF01144 Coenzyme A transferase VEJY3_19296 PF01418 Helix-turn-helix domain, rpiR family VEJY3_19296 PF01380 SIS domain VEJY3_19306 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_19311 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_19316 PF00005 ABC transporter VEJY3_19321 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VEJY3_19326 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_19331 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_19331 PF12911 N-terminal TM domain of oligopeptide transport permease C VEJY3_19336 PF00005 ABC transporter VEJY3_19336 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VEJY3_19351 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_19351 PF00512 His Kinase A (phospho-acceptor) domain VEJY3_19351 PF00672 HAMP domain VEJY3_19356 PF00072 Response regulator receiver domain VEJY3_19356 PF00486 Transcriptional regulatory protein, C terminal VEJY3_19366 PF01047 MarR family VEJY3_19371 PF16884 N-terminal domain of oxidoreductase VEJY3_19371 PF00107 Zinc-binding dehydrogenase VEJY3_19376 PF00149 Calcineurin-like phosphoesterase VEJY3_19376 PF12320 Type 5 capsule protein repressor C-terminal domain VEJY3_19381 PF13476 AAA domain VEJY3_19401 PF01638 HxlR-like helix-turn-helix VEJY3_19406 PF05368 NmrA-like family VEJY3_19411 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_19411 PF03466 LysR substrate binding domain VEJY3_19421 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VEJY3_19426 PF03480 Bacterial extracellular solute-binding protein, family 7 VEJY3_19431 PF01266 FAD dependent oxidoreductase VEJY3_19441 PF04324 BFD-like [2Fe-2S] binding domain VEJY3_19441 PF07992 Pyridine nucleotide-disulphide oxidoreductase VEJY3_19446 PF01042 Endoribonuclease L-PSP VEJY3_19456 PF08212 Lipocalin-like domain VEJY3_19471 PF01212 Beta-eliminating lyase VEJY3_19476 PF00293 NUDIX domain VEJY3_19481 PF17868 AAA lid domain VEJY3_19481 PF07728 AAA domain (dynein-related subfamily) VEJY3_19481 PF12592 Protein of unknown function (DUF3763) VEJY3_19486 PF05762 VWA domain containing CoxE-like protein VEJY3_19491 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_19491 PF03466 LysR substrate binding domain VEJY3_19496 PF01565 FAD binding domain VEJY3_19496 PF09330 D-lactate dehydrogenase, membrane binding VEJY3_19526 PF00072 Response regulator receiver domain VEJY3_19526 PF00990 Diguanylate cyclase, GGDEF domain VEJY3_19536 PF13462 Thioredoxin VEJY3_19536 PF06965 Na+/H+ antiporter 1 VEJY3_19551 PF00563 EAL domain VEJY3_19551 PF00990 Diguanylate cyclase, GGDEF domain VEJY3_19551 PF13426 PAS domain VEJY3_19556 PF14760 Rnk N-terminus VEJY3_19556 PF01272 Transcription elongation factor, GreA/GreB, C-term VEJY3_19561 PF07992 Pyridine nucleotide-disulphide oxidoreductase VEJY3_19561 PF01077 Nitrite and sulphite reductase 4Fe-4S domain VEJY3_19561 PF04324 BFD-like [2Fe-2S] binding domain VEJY3_19561 PF18267 Rubredoxin NAD+ reductase C-terminal domain VEJY3_19561 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain VEJY3_19566 PF13806 Rieske-like [2Fe-2S] domain VEJY3_19571 PF01226 Formate/nitrite transporter VEJY3_19576 PF14824 Sirohaem biosynthesis protein central VEJY3_19576 PF10414 Sirohaem synthase dimerisation region VEJY3_19576 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases VEJY3_19591 PF03605 Anaerobic c4-dicarboxylate membrane transporter VEJY3_19606 PF11756 Nitrous oxide-stimulated promoter VEJY3_19611 PF07690 Major Facilitator Superfamily VEJY3_19616 PF00085 Thioredoxin VEJY3_19621 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal VEJY3_19621 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III VEJY3_19641 PF02634 FdhD/NarQ family VEJY3_19646 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_19646 PF03466 LysR substrate binding domain VEJY3_19651 PF01568 Molydopterin dinucleotide binding domain VEJY3_19651 PF00384 Molybdopterin oxidoreductase VEJY3_19656 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain VEJY3_19656 PF07992 Pyridine nucleotide-disulphide oxidoreductase VEJY3_19671 PF04143 Sulphur transport VEJY3_19681 PF00873 AcrB/AcrD/AcrF family VEJY3_19686 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VEJY3_19696 PF03477 ATP cone domain VEJY3_19696 PF13597 Anaerobic ribonucleoside-triphosphate reductase VEJY3_19706 PF01554 MatE VEJY3_19711 PF12852 Cupin VEJY3_19711 PF12833 Helix-turn-helix domain VEJY3_19716 PF00155 Aminotransferase class I and II VEJY3_19721 PF18030 RimK PreATP-grasp domain VEJY3_19721 PF08443 RimK-like ATP-grasp domain VEJY3_19731 PF07685 CobB/CobQ-like glutamine amidotransferase domain VEJY3_19741 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_19746 PF03459 TOBE domain VEJY3_19746 PF00005 ABC transporter VEJY3_19756 PF00360 Phytochrome region VEJY3_19756 PF00990 Diguanylate cyclase, GGDEF domain VEJY3_19756 PF00563 EAL domain VEJY3_19756 PF01590 GAF domain VEJY3_19761 PF00990 Diguanylate cyclase, GGDEF domain VEJY3_19761 PF05230 MASE2 domain VEJY3_19776 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch VEJY3_19776 PF05222 Alanine dehydrogenase/PNT, N-terminal domain VEJY3_19776 PF01262 Alanine dehydrogenase/PNT, C-terminal domain VEJY3_19781 PF02233 NAD(P) transhydrogenase beta subunit VEJY3_19786 PF00672 HAMP domain VEJY3_19786 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_19786 PF00512 His Kinase A (phospho-acceptor) domain VEJY3_19791 PF00072 Response regulator receiver domain VEJY3_19791 PF00486 Transcriptional regulatory protein, C terminal VEJY3_19806 PF03701 Uncharacterised protein family (UPF0181) VEJY3_19811 PF00582 Universal stress protein family VEJY3_19836 PF01253 Translation initiation factor SUI1 VEJY3_19846 PF01820 D-ala D-ala ligase N-terminus VEJY3_19846 PF07478 D-ala D-ala ligase C-terminus VEJY3_19851 PF05036 Sporulation related domain VEJY3_19856 PF00583 Acetyltransferase (GNAT) family VEJY3_19856 PF13380 CoA binding domain VEJY3_19856 PF13607 Succinyl-CoA ligase like flavodoxin domain VEJY3_19861 PF03466 LysR substrate binding domain VEJY3_19861 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_19866 PF16363 GDP-mannose 4,6 dehydratase VEJY3_19881 PF03746 LamB/YcsF family VEJY3_19886 PF02682 Carboxyltransferase domain, subdomain C and D VEJY3_19891 PF02626 Carboxyltransferase domain, subdomain A and B VEJY3_19896 PF01593 Flavin containing amine oxidoreductase VEJY3_19906 PF00005 ABC transporter VEJY3_19911 PF13472 GDSL-like Lipase/Acylhydrolase family VEJY3_19916 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase VEJY3_19916 PF07055 Enoyl reductase FAD binding domain VEJY3_19916 PF12241 Trans-2-enoyl-CoA reductase catalytic region VEJY3_19921 PF00990 Diguanylate cyclase, GGDEF domain VEJY3_19921 PF13188 PAS domain VEJY3_19921 PF00563 EAL domain VEJY3_19921 PF03707 Bacterial signalling protein N terminal repeat VEJY3_19931 PF00226 DnaJ domain VEJY3_19931 PF01556 DnaJ C terminal domain VEJY3_19931 PF00684 DnaJ central domain VEJY3_19946 PF03091 CutA1 divalent ion tolerance protein VEJY3_19956 PF12793 Sugar transport-related sRNA regulator N-term VEJY3_19956 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VEJY3_19966 PF03061 Thioesterase superfamily VEJY3_19981 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VEJY3_19986 PF12262 Bacterial virulence factor lipase N-terminal VEJY3_20001 PF03741 Integral membrane protein TerC family VEJY3_20006 PF02872 5'-nucleotidase, C-terminal domain VEJY3_20006 PF00149 Calcineurin-like phosphoesterase VEJY3_20011 PF11398 Protein of unknown function (DUF2813) VEJY3_20016 PF06496 Protein of unknown function (DUF1097) VEJY3_20021 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_20021 PF03466 LysR substrate binding domain VEJY3_20026 PF01226 Formate/nitrite transporter VEJY3_20031 PF04264 YceI-like domain VEJY3_20036 PF01292 Prokaryotic cytochrome b561 VEJY3_20051 PF00563 EAL domain VEJY3_20051 PF12792 CSS motif domain associated with EAL VEJY3_20056 PF00271 Helicase conserved C-terminal domain VEJY3_20056 PF00270 DEAD/DEAH box helicase VEJY3_20061 PF04336 Acyl carrier protein phosphodiesterase VEJY3_20071 PF00672 HAMP domain VEJY3_20071 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VEJY3_20076 PF13419 Haloacid dehalogenase-like hydrolase VEJY3_20091 PF00294 pfkB family carbohydrate kinase VEJY3_20096 PF01268 Formate--tetrahydrofolate ligase VEJY3_20101 PF00483 Nucleotidyl transferase VEJY3_20106 PF06483 Chitinase C VEJY3_20106 PF00704 Glycosyl hydrolases family 18 VEJY3_20111 PF06719 AraC-type transcriptional regulator N-terminus VEJY3_20111 PF12833 Helix-turn-helix domain VEJY3_20116 PF00465 Iron-containing alcohol dehydrogenase VEJY3_20126 PF00005 ABC transporter VEJY3_20131 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_20136 PF00497 Bacterial extracellular solute-binding proteins, family 3 VEJY3_20141 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_20156 PF00356 Bacterial regulatory proteins, lacI family VEJY3_20156 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VEJY3_20161 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 VEJY3_20161 PF00381 PTS HPr component phosphorylation site VEJY3_20166 PF00294 pfkB family carbohydrate kinase VEJY3_20171 PF02378 Phosphotransferase system, EIIC VEJY3_20171 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit VEJY3_20176 PF00873 AcrB/AcrD/AcrF family VEJY3_20186 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VEJY3_20196 PF01571 Aminomethyltransferase folate-binding domain VEJY3_20196 PF08669 Glycine cleavage T-protein C-terminal barrel domain VEJY3_20206 PF00464 Serine hydroxymethyltransferase VEJY3_20211 PF01597 Glycine cleavage H-protein VEJY3_20216 PF02347 Glycine cleavage system P-protein VEJY3_20266 PF01063 Amino-transferase class IV VEJY3_20271 PF00591 Glycosyl transferase family, a/b domain VEJY3_20271 PF02885 Glycosyl transferase family, helical bundle domain VEJY3_20276 PF03222 Tryptophan/tyrosine permease family VEJY3_20311 PF00012 Hsp70 protein VEJY3_20326 PF00676 Dehydrogenase E1 component VEJY3_20331 PF02779 Transketolase, pyrimidine binding domain VEJY3_20331 PF02780 Transketolase, C-terminal domain VEJY3_20336 PF02817 e3 binding domain VEJY3_20336 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VEJY3_20336 PF00364 Biotin-requiring enzyme VEJY3_20346 PF00202 Aminotransferase class-III VEJY3_20346 PF00109 Beta-ketoacyl synthase, N-terminal domain VEJY3_20346 PF16197 Ketoacyl-synthetase C-terminal extension VEJY3_20346 PF00550 Phosphopantetheine attachment site VEJY3_20346 PF00501 AMP-binding enzyme VEJY3_20346 PF02801 Beta-ketoacyl synthase, C-terminal domain VEJY3_20346 PF13193 AMP-binding enzyme C-terminal domain VEJY3_20346 PF00668 Condensation domain VEJY3_20351 PF08220 DeoR-like helix-turn-helix domain VEJY3_20351 PF00455 DeoR C terminal sensor domain VEJY3_20356 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VEJY3_20356 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VEJY3_20361 PF03928 Haem-degrading VEJY3_20376 PF13193 AMP-binding enzyme C-terminal domain VEJY3_20376 PF00501 AMP-binding enzyme VEJY3_20381 PF02780 Transketolase, C-terminal domain VEJY3_20381 PF02779 Transketolase, pyrimidine binding domain VEJY3_20381 PF00364 Biotin-requiring enzyme VEJY3_20386 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) VEJY3_20386 PF00364 Biotin-requiring enzyme VEJY3_20386 PF02817 e3 binding domain VEJY3_20396 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain VEJY3_20396 PF00391 PEP-utilising enzyme, mobile domain VEJY3_20396 PF02896 PEP-utilising enzyme, TIM barrel domain VEJY3_20401 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B VEJY3_20411 PF01568 Molydopterin dinucleotide binding domain VEJY3_20411 PF00384 Molybdopterin oxidoreductase VEJY3_20411 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VEJY3_20416 PF00690 Cation transporter/ATPase, N-terminus VEJY3_20416 PF00689 Cation transporting ATPase, C-terminus VEJY3_20441 PF00158 Sigma-54 interaction domain VEJY3_20441 PF01590 GAF domain VEJY3_20446 PF10605 3HB-oligomer hydrolase (3HBOH) VEJY3_20456 PF00082 Subtilase family VEJY3_20456 PF04151 Bacterial pre-peptidase C-terminal domain VEJY3_20461 PF05995 Cysteine dioxygenase type I VEJY3_20471 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_20471 PF03466 LysR substrate binding domain VEJY3_20481 PF01235 Sodium:alanine symporter family VEJY3_20486 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_20491 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_20496 PF00497 Bacterial extracellular solute-binding proteins, family 3 VEJY3_20501 PF00005 ABC transporter VEJY3_20506 PF08031 Berberine and berberine like VEJY3_20506 PF01565 FAD binding domain VEJY3_20516 PF00141 Peroxidase VEJY3_20526 PF01975 Survival protein SurE VEJY3_20541 PF02574 Homocysteine S-methyltransferase VEJY3_20546 PF13520 Amino acid permease VEJY3_20556 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VEJY3_20561 PF01040 UbiA prenyltransferase family VEJY3_20571 PF00510 Cytochrome c oxidase subunit III VEJY3_20576 PF00115 Cytochrome C and Quinol oxidase polypeptide I VEJY3_20581 PF06481 COX Aromatic Rich Motif VEJY3_20581 PF00116 Cytochrome C oxidase subunit II, periplasmic domain VEJY3_20591 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VEJY3_20591 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VEJY3_20596 PF00378 Enoyl-CoA hydratase/isomerase VEJY3_20601 PF00378 Enoyl-CoA hydratase/isomerase VEJY3_20606 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VEJY3_20606 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VEJY3_20606 PF02770 Acyl-CoA dehydrogenase, middle domain VEJY3_20611 PF00171 Aldehyde dehydrogenase family VEJY3_20616 PF02803 Thiolase, C-terminal domain VEJY3_20616 PF00108 Thiolase, N-terminal domain VEJY3_20621 PF00376 MerR family regulatory protein VEJY3_20621 PF09278 MerR, DNA binding VEJY3_20626 PF02770 Acyl-CoA dehydrogenase, middle domain VEJY3_20626 PF02771 Acyl-CoA dehydrogenase, N-terminal domain VEJY3_20626 PF00441 Acyl-CoA dehydrogenase, C-terminal domain VEJY3_20631 PF01039 Carboxyl transferase domain VEJY3_20641 PF00682 HMGL-like VEJY3_20646 PF10063 Uncharacterized integral membrane protein (DUF2301) VEJY3_20656 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VEJY3_20656 PF13426 PAS domain VEJY3_20656 PF08447 PAS fold VEJY3_20671 PF01323 DSBA-like thioredoxin domain VEJY3_20681 PF01638 HxlR-like helix-turn-helix VEJY3_20691 PF13657 HipA N-terminal domain VEJY3_20691 PF07804 HipA-like C-terminal domain VEJY3_20706 PF00117 Glutamine amidotransferase class-I VEJY3_20716 PF02386 Cation transport protein VEJY3_20721 PF02254 TrkA-N domain VEJY3_20721 PF02080 TrkA-C domain VEJY3_20726 PF02386 Cation transport protein VEJY3_20731 PF00486 Transcriptional regulatory protein, C terminal VEJY3_20731 PF00072 Response regulator receiver domain VEJY3_20736 PF02702 Osmosensitive K+ channel His kinase sensor domain VEJY3_20736 PF13493 Domain of unknown function (DUF4118) VEJY3_20736 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_20736 PF00512 His Kinase A (phospho-acceptor) domain VEJY3_20741 PF05552 Conserved TM helix VEJY3_20741 PF00924 Mechanosensitive ion channel VEJY3_20746 PF02424 ApbE family VEJY3_20751 PF01699 Sodium/calcium exchanger protein VEJY3_20756 PF02673 Bacitracin resistance protein BacA VEJY3_20766 PF00005 ABC transporter VEJY3_20766 PF16326 ABC transporter C-terminal domain VEJY3_20766 PF12848 ABC transporter VEJY3_20796 PF13302 Acetyltransferase (GNAT) domain VEJY3_20811 PF02743 Cache domain VEJY3_20811 PF00672 HAMP domain VEJY3_20811 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VEJY3_20851 PF03707 Bacterial signalling protein N terminal repeat VEJY3_20851 PF00990 Diguanylate cyclase, GGDEF domain VEJY3_20851 PF00563 EAL domain VEJY3_20876 PF01695 IstB-like ATP binding protein VEJY3_20886 PF00990 Diguanylate cyclase, GGDEF domain VEJY3_20901 PF00816 H-NS histone family VEJY3_20906 PF00563 EAL domain VEJY3_20906 PF00990 Diguanylate cyclase, GGDEF domain VEJY3_20906 PF03707 Bacterial signalling protein N terminal repeat VEJY3_20921 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VEJY3_20926 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_20926 PF03466 LysR substrate binding domain VEJY3_20931 PF08386 TAP-like protein VEJY3_20931 PF00561 alpha/beta hydrolase fold VEJY3_20936 PF01810 LysE type translocator VEJY3_20951 PF07687 Peptidase dimerisation domain VEJY3_20951 PF01546 Peptidase family M20/M25/M40 VEJY3_20956 PF00291 Pyridoxal-phosphate dependent enzyme VEJY3_20961 PF01546 Peptidase family M20/M25/M40 VEJY3_20961 PF07687 Peptidase dimerisation domain VEJY3_20966 PF01037 Lrp/AsnC ligand binding domain VEJY3_20991 PF02665 Nitrate reductase gamma subunit VEJY3_20996 PF02613 Nitrate reductase delta subunit VEJY3_21001 PF14711 Respiratory nitrate reductase beta C-terminal VEJY3_21001 PF13247 4Fe-4S dicluster domain VEJY3_21006 PF01568 Molydopterin dinucleotide binding domain VEJY3_21006 PF00384 Molybdopterin oxidoreductase VEJY3_21006 PF14710 Respiratory nitrate reductase alpha N-terminal VEJY3_21011 PF07690 Major Facilitator Superfamily VEJY3_21016 PF07730 Histidine kinase VEJY3_21016 PF00672 HAMP domain VEJY3_21016 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_21016 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term VEJY3_21021 PF00072 Response regulator receiver domain VEJY3_21021 PF00196 Bacterial regulatory proteins, luxR family VEJY3_21026 PF04405 Domain of Unknown function (DUF542) VEJY3_21026 PF01814 Hemerythrin HHE cation binding domain VEJY3_21041 PF18113 Rubredoxin binding C-terminal domain VEJY3_21041 PF07992 Pyridine nucleotide-disulphide oxidoreductase VEJY3_21046 PF00301 Rubredoxin VEJY3_21046 PF00258 Flavodoxin VEJY3_21046 PF00753 Metallo-beta-lactamase superfamily VEJY3_21051 PF01590 GAF domain VEJY3_21051 PF00158 Sigma-54 interaction domain VEJY3_21061 PF02954 Bacterial regulatory protein, Fis family VEJY3_21066 PF02694 Uncharacterised BCR, YnfA/UPF0060 family VEJY3_21126 PF00871 Acetokinase family VEJY3_21131 PF00563 EAL domain VEJY3_21131 PF00990 Diguanylate cyclase, GGDEF domain VEJY3_21131 PF03707 Bacterial signalling protein N terminal repeat VEJY3_21136 PF00270 DEAD/DEAH box helicase VEJY3_21136 PF03880 DbpA RNA binding domain VEJY3_21136 PF00271 Helicase conserved C-terminal domain VEJY3_21141 PF00465 Iron-containing alcohol dehydrogenase VEJY3_21146 PF00596 Class II Aldolase and Adducin N-terminal domain VEJY3_21151 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VEJY3_21151 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VEJY3_21156 PF07882 L-fucose isomerase, second N-terminal domain VEJY3_21156 PF02952 L-fucose isomerase, C-terminal domain VEJY3_21156 PF07881 L-fucose isomerase, first N-terminal domain VEJY3_21161 PF08220 DeoR-like helix-turn-helix domain VEJY3_21161 PF00455 DeoR C terminal sensor domain VEJY3_21166 PF03334 Na+/H+ antiporter subunit VEJY3_21171 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) VEJY3_21191 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter VEJY3_21191 PF13244 Domain of unknown function (DUF4040) VEJY3_21191 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus VEJY3_21191 PF00361 Proton-conducting membrane transporter VEJY3_21196 PF00582 Universal stress protein family VEJY3_21201 PF00773 RNB domain VEJY3_21201 PF00575 S1 RNA binding domain VEJY3_21201 PF08206 Ribonuclease B OB domain VEJY3_21211 PF12849 PBP superfamily domain VEJY3_21226 PF01594 AI-2E family transporter VEJY3_21241 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_21241 PF03466 LysR substrate binding domain VEJY3_21246 PF08543 Phosphomethylpyrimidine kinase VEJY3_21256 PF00529 HlyD membrane-fusion protein of T1SS VEJY3_21256 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VEJY3_21261 PF12795 Mechanosensitive ion channel porin domain VEJY3_21261 PF12794 Mechanosensitive ion channel inner membrane domain 1 VEJY3_21261 PF00924 Mechanosensitive ion channel VEJY3_21276 PF00005 ABC transporter VEJY3_21281 PF02405 Permease MlaE VEJY3_21291 PF13533 Biotin-lipoyl like VEJY3_21316 PF00990 Diguanylate cyclase, GGDEF domain VEJY3_21316 PF00072 Response regulator receiver domain VEJY3_21321 PF07733 Bacterial DNA polymerase III alpha NTPase domain VEJY3_21321 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VEJY3_21321 PF14579 Helix-hairpin-helix motif VEJY3_21321 PF02811 PHP domain VEJY3_21321 PF00929 Exonuclease VEJY3_21331 PF00474 Sodium:solute symporter family VEJY3_21336 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VEJY3_21336 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VEJY3_21341 PF01261 Xylose isomerase-like TIM barrel VEJY3_21351 PF02311 AraC-like ligand binding domain VEJY3_21351 PF12833 Helix-turn-helix domain VEJY3_21356 PF01408 Oxidoreductase family, NAD-binding Rossmann fold VEJY3_21356 PF02894 Oxidoreductase family, C-terminal alpha/beta domain VEJY3_21361 PF13419 Haloacid dehalogenase-like hydrolase VEJY3_21366 PF07690 Major Facilitator Superfamily VEJY3_21371 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VEJY3_21371 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VEJY3_21376 PF01232 Mannitol dehydrogenase Rossmann domain VEJY3_21376 PF08125 Mannitol dehydrogenase C-terminal domain VEJY3_21381 PF04198 Putative sugar-binding domain VEJY3_21406 PF00155 Aminotransferase class I and II VEJY3_21421 PF12833 Helix-turn-helix domain VEJY3_21421 PF06719 AraC-type transcriptional regulator N-terminus VEJY3_21426 PF00251 Glycosyl hydrolases family 32 N-terminal domain VEJY3_21426 PF08244 Glycosyl hydrolases family 32 C terminal VEJY3_21431 PF00005 ABC transporter VEJY3_21431 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VEJY3_21441 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_21446 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VEJY3_21461 PF16875 Glycosyl hydrolase family 36 N-terminal domain VEJY3_21461 PF16874 Glycosyl hydrolase family 36 C-terminal domain VEJY3_21466 PF12833 Helix-turn-helix domain VEJY3_21466 PF02311 AraC-like ligand binding domain VEJY3_21471 PF08544 GHMP kinases C terminal VEJY3_21471 PF00288 GHMP kinases N terminal domain VEJY3_21471 PF10509 Galactokinase galactose-binding signature VEJY3_21486 PF16363 GDP-mannose 4,6 dehydratase VEJY3_21491 PF00465 Iron-containing alcohol dehydrogenase VEJY3_21496 PF00107 Zinc-binding dehydrogenase VEJY3_21496 PF08240 Alcohol dehydrogenase GroES-like domain VEJY3_21501 PF12706 Beta-lactamase superfamily domain VEJY3_21506 PF12833 Helix-turn-helix domain VEJY3_21511 PF03313 Serine dehydratase alpha chain VEJY3_21511 PF03315 Serine dehydratase beta chain VEJY3_21516 PF00551 Formyl transferase VEJY3_21526 PF07992 Pyridine nucleotide-disulphide oxidoreductase VEJY3_21526 PF08669 Glycine cleavage T-protein C-terminal barrel domain VEJY3_21526 PF01571 Aminomethyltransferase folate-binding domain VEJY3_21526 PF17806 Sarcosine oxidase A3 domain VEJY3_21531 PF04267 Sarcosine oxidase, delta subunit family VEJY3_21536 PF01266 FAD dependent oxidoreductase VEJY3_21541 PF00464 Serine hydroxymethyltransferase VEJY3_21546 PF00042 Globin VEJY3_21546 PF00175 Oxidoreductase NAD-binding domain VEJY3_21546 PF00970 Oxidoreductase FAD-binding domain VEJY3_21551 PF00355 Rieske [2Fe-2S] domain VEJY3_21551 PF00848 Ring hydroxylating alpha subunit (catalytic domain) VEJY3_21556 PF00202 Aminotransferase class-III VEJY3_21566 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VEJY3_21576 PF03480 Bacterial extracellular solute-binding protein, family 7 VEJY3_21581 PF00171 Aldehyde dehydrogenase family VEJY3_21586 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_21586 PF03466 LysR substrate binding domain VEJY3_21621 PF00306 ATP synthase alpha/beta chain, C terminal domain VEJY3_21621 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VEJY3_21626 PF00213 ATP synthase delta (OSCP) subunit VEJY3_21626 PF00430 ATP synthase B/B' CF(0) VEJY3_21631 PF00137 ATP synthase subunit C VEJY3_21636 PF00119 ATP synthase A chain VEJY3_21651 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain VEJY3_21651 PF02874 ATP synthase alpha/beta family, beta-barrel domain VEJY3_21656 PF00248 Aldo/keto reductase family VEJY3_21666 PF02028 BCCT, betaine/carnitine/choline family transporter VEJY3_21676 PF00766 Electron transfer flavoprotein FAD-binding domain VEJY3_21676 PF01012 Electron transfer flavoprotein domain VEJY3_21681 PF13183 4Fe-4S dicluster domain VEJY3_21681 PF02754 Cysteine-rich domain VEJY3_21686 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VEJY3_21701 PF12833 Helix-turn-helix domain VEJY3_21701 PF01965 DJ-1/PfpI family VEJY3_21706 PF02129 X-Pro dipeptidyl-peptidase (S15 family) VEJY3_21711 PF00465 Iron-containing alcohol dehydrogenase VEJY3_21716 PF02685 Glucokinase VEJY3_21721 PF12706 Beta-lactamase superfamily domain VEJY3_21731 PF00005 ABC transporter VEJY3_21736 PF12792 CSS motif domain associated with EAL VEJY3_21736 PF00563 EAL domain VEJY3_21751 PF00271 Helicase conserved C-terminal domain VEJY3_21751 PF00270 DEAD/DEAH box helicase VEJY3_21756 PF02492 CobW/HypB/UreG, nucleotide-binding domain VEJY3_21756 PF07683 Cobalamin synthesis protein cobW C-terminal domain VEJY3_21761 PF01470 Pyroglutamyl peptidase VEJY3_21771 PF00291 Pyridoxal-phosphate dependent enzyme VEJY3_21776 PF12843 Putative quorum-sensing-regulated virulence factor VEJY3_21796 PF01329 Pterin 4 alpha carbinolamine dehydratase VEJY3_21801 PF00351 Biopterin-dependent aromatic amino acid hydroxylase VEJY3_21806 PF00501 AMP-binding enzyme VEJY3_21806 PF13193 AMP-binding enzyme C-terminal domain VEJY3_21816 PF03466 LysR substrate binding domain VEJY3_21816 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_21826 PF00892 EamA-like transporter family VEJY3_21836 PF00465 Iron-containing alcohol dehydrogenase VEJY3_21841 PF07995 Glucose / Sorbosone dehydrogenase VEJY3_21851 PF00210 Ferritin-like domain VEJY3_21856 PF00672 HAMP domain VEJY3_21856 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VEJY3_21856 PF17200 Single Cache domain 2 VEJY3_21866 PF02687 FtsX-like permease family VEJY3_21866 PF00005 ABC transporter VEJY3_21866 PF12704 MacB-like periplasmic core domain VEJY3_21871 PF12704 MacB-like periplasmic core domain VEJY3_21871 PF00005 ABC transporter VEJY3_21871 PF02687 FtsX-like permease family VEJY3_21891 PF00313 'Cold-shock' DNA-binding domain VEJY3_21911 PF00691 OmpA family VEJY3_21911 PF05736 OprF membrane domain VEJY3_21921 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase VEJY3_21921 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase VEJY3_21926 PF01040 UbiA prenyltransferase family VEJY3_21931 PF02628 Cytochrome oxidase assembly protein VEJY3_21951 PF00510 Cytochrome c oxidase subunit III VEJY3_21956 PF04442 Cytochrome c oxidase assembly protein CtaG/Cox11 VEJY3_21961 PF00115 Cytochrome C and Quinol oxidase polypeptide I VEJY3_21966 PF00116 Cytochrome C oxidase subunit II, periplasmic domain VEJY3_21966 PF02790 Cytochrome C oxidase subunit II, transmembrane domain VEJY3_21971 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain VEJY3_21971 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III VEJY3_21971 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II VEJY3_21971 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I VEJY3_21976 PF01810 LysE type translocator VEJY3_21996 PF01557 Fumarylacetoacetate (FAA) hydrolase family VEJY3_22021 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_22021 PF03466 LysR substrate binding domain VEJY3_22026 PF08448 PAS fold VEJY3_22026 PF00563 EAL domain VEJY3_22026 PF00990 Diguanylate cyclase, GGDEF domain VEJY3_22026 PF08447 PAS fold VEJY3_22031 PF01551 Peptidase family M23 VEJY3_22031 PF08525 Opacity-associated protein A N-terminal motif VEJY3_22031 PF01476 LysM domain VEJY3_22056 PF02743 Cache domain VEJY3_22056 PF00672 HAMP domain VEJY3_22056 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VEJY3_22066 PF03222 Tryptophan/tyrosine permease family VEJY3_22096 PF01758 Sodium Bile acid symporter family VEJY3_22101 PF02567 Phenazine biosynthesis-like protein VEJY3_22111 PF00005 ABC transporter VEJY3_22126 PF12838 4Fe-4S dicluster domain VEJY3_22126 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region VEJY3_22126 PF01568 Molydopterin dinucleotide binding domain VEJY3_22126 PF00384 Molybdopterin oxidoreductase VEJY3_22126 PF04879 Molybdopterin oxidoreductase Fe4S4 domain VEJY3_22141 PF00873 AcrB/AcrD/AcrF family VEJY3_22151 PF00970 Oxidoreductase FAD-binding domain VEJY3_22151 PF00111 2Fe-2S iron-sulfur cluster binding domain VEJY3_22151 PF00175 Oxidoreductase NAD-binding domain VEJY3_22161 PF17158 Membrane-associated sensor, integral membrane domain VEJY3_22161 PF00990 Diguanylate cyclase, GGDEF domain VEJY3_22171 PF13302 Acetyltransferase (GNAT) domain VEJY3_22176 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) VEJY3_22181 PF00582 Universal stress protein family VEJY3_22191 PF04074 YhcH/YjgK/YiaL VEJY3_22206 PF16868 NMT1-like family VEJY3_22211 PF00701 Dihydrodipicolinate synthetase family VEJY3_22216 PF00465 Iron-containing alcohol dehydrogenase VEJY3_22221 PF07005 Sugar-binding N-terminal domain VEJY3_22221 PF17042 Nucleotide-binding C-terminal domain VEJY3_22226 PF04166 Pyridoxal phosphate biosynthetic protein PdxA VEJY3_22231 PF08220 DeoR-like helix-turn-helix domain VEJY3_22231 PF00455 DeoR C terminal sensor domain VEJY3_22236 PF02525 Flavodoxin-like fold VEJY3_22241 PF02254 TrkA-N domain VEJY3_22241 PF00999 Sodium/hydrogen exchanger family VEJY3_22261 PF00128 Alpha amylase, catalytic domain VEJY3_22266 PF00465 Iron-containing alcohol dehydrogenase VEJY3_22271 PF01266 FAD dependent oxidoreductase VEJY3_22281 PF00202 Aminotransferase class-III VEJY3_22286 PF00171 Aldehyde dehydrogenase family VEJY3_22291 PF03480 Bacterial extracellular solute-binding protein, family 7 VEJY3_22301 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VEJY3_22321 PF00999 Sodium/hydrogen exchanger family VEJY3_22326 PF01168 Alanine racemase, N-terminal domain VEJY3_22326 PF00842 Alanine racemase, C-terminal domain VEJY3_22336 PF13378 Enolase C-terminal domain-like VEJY3_22336 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain VEJY3_22341 PF01063 Amino-transferase class IV VEJY3_22356 PF00724 NADH:flavin oxidoreductase / NADH oxidase family VEJY3_22361 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_22361 PF03466 LysR substrate binding domain VEJY3_22366 PF00107 Zinc-binding dehydrogenase VEJY3_22366 PF08240 Alcohol dehydrogenase GroES-like domain VEJY3_22371 PF03466 LysR substrate binding domain VEJY3_22371 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_22381 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase VEJY3_22396 PF01844 HNH endonuclease VEJY3_22406 PF00072 Response regulator receiver domain VEJY3_22406 PF01584 CheW-like domain VEJY3_22411 PF01243 Pyridoxamine 5'-phosphate oxidase VEJY3_22446 PF01467 Cytidylyltransferase-like VEJY3_22451 PF02540 NAD synthase VEJY3_22456 PF00111 2Fe-2S iron-sulfur cluster binding domain VEJY3_22456 PF03476 MOSC N-terminal beta barrel domain VEJY3_22456 PF03476 MOSC N-terminal beta barrel domain VEJY3_22456 PF03473 MOSC domain VEJY3_22456 PF00111 2Fe-2S iron-sulfur cluster binding domain VEJY3_22456 PF03473 MOSC domain VEJY3_22466 PF01979 Amidohydrolase family VEJY3_22471 PF05661 Protein of unknown function (DUF808) VEJY3_22481 PF07733 Bacterial DNA polymerase III alpha NTPase domain VEJY3_22481 PF14579 Helix-hairpin-helix motif VEJY3_22481 PF17657 Bacterial DNA polymerase III alpha subunit finger domain VEJY3_22481 PF02811 PHP domain VEJY3_22481 PF11490 DNA polymerase III polC-type N-terminus II VEJY3_22481 PF00929 Exonuclease VEJY3_22496 PF00664 ABC transporter transmembrane region VEJY3_22496 PF00005 ABC transporter VEJY3_22501 PF03553 Na+/H+ antiporter family VEJY3_22506 PF00850 Histone deacetylase domain VEJY3_22511 PF00196 Bacterial regulatory proteins, luxR family VEJY3_22521 PF08279 HTH domain VEJY3_22521 PF13280 WYL domain VEJY3_22526 PF03480 Bacterial extracellular solute-binding protein, family 7 VEJY3_22536 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component VEJY3_22546 PF02627 Carboxymuconolactone decarboxylase family VEJY3_22566 PF00691 OmpA family VEJY3_22566 PF01389 OmpA-like transmembrane domain VEJY3_22581 PF16875 Glycosyl hydrolase family 36 N-terminal domain VEJY3_22581 PF16874 Glycosyl hydrolase family 36 C-terminal domain VEJY3_22586 PF02264 LamB porin VEJY3_22596 PF02836 Glycosyl hydrolases family 2, TIM barrel domain VEJY3_22596 PF16353 Domain of unknown function(DUF4981) VEJY3_22596 PF02837 Glycosyl hydrolases family 2, sugar binding domain VEJY3_22596 PF00703 Glycosyl hydrolases family 2 VEJY3_22596 PF02929 Beta galactosidase small chain VEJY3_22601 PF00356 Bacterial regulatory proteins, lacI family VEJY3_22606 PF00356 Bacterial regulatory proteins, lacI family VEJY3_22611 PF01263 Aldose 1-epimerase VEJY3_22626 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain VEJY3_22626 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain VEJY3_22631 PF16363 GDP-mannose 4,6 dehydratase VEJY3_22641 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) VEJY3_22646 PF12794 Mechanosensitive ion channel inner membrane domain 1 VEJY3_22646 PF12795 Mechanosensitive ion channel porin domain VEJY3_22646 PF00924 Mechanosensitive ion channel VEJY3_22661 PF00005 ABC transporter VEJY3_22666 PF02405 Permease MlaE VEJY3_22676 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_22676 PF03466 LysR substrate binding domain VEJY3_22686 PF13333 Integrase core domain VEJY3_22686 PF13276 HTH-like domain VEJY3_22686 PF00665 Integrase core domain VEJY3_22691 PF01527 Transposase VEJY3_22701 PF08543 Phosphomethylpyrimidine kinase VEJY3_22706 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain VEJY3_22706 PF01276 Orn/Lys/Arg decarboxylase, major domain VEJY3_22706 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain VEJY3_22711 PF01276 Orn/Lys/Arg decarboxylase, major domain VEJY3_22711 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain VEJY3_22711 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain VEJY3_22716 PF13520 Amino acid permease VEJY3_22726 PF13520 Amino acid permease VEJY3_22746 PF13533 Biotin-lipoyl like VEJY3_22761 PF00356 Bacterial regulatory proteins, lacI family VEJY3_22776 PF07690 Major Facilitator Superfamily VEJY3_22781 PF00474 Sodium:solute symporter family VEJY3_22786 PF03315 Serine dehydratase beta chain VEJY3_22786 PF03313 Serine dehydratase alpha chain VEJY3_22796 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_22801 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_22806 PF01547 Bacterial extracellular solute-binding protein VEJY3_22811 PF03459 TOBE domain VEJY3_22811 PF00005 ABC transporter VEJY3_22811 PF17912 MalK OB fold domain VEJY3_22821 PF02378 Phosphotransferase system, EIIC VEJY3_22821 PF00367 phosphotransferase system, EIIB VEJY3_22826 PF11975 Family 4 glycosyl hydrolase C-terminal domain VEJY3_22826 PF02056 Family 4 glycosyl hydrolase VEJY3_22836 PF00561 alpha/beta hydrolase fold VEJY3_22856 PF03328 HpcH/HpaI aldolase/citrate lyase family VEJY3_22861 PF00356 Bacterial regulatory proteins, lacI family VEJY3_22876 PF00474 Sodium:solute symporter family VEJY3_22896 PF00313 'Cold-shock' DNA-binding domain VEJY3_22901 PF00694 Aconitase C-terminal domain VEJY3_22901 PF00330 Aconitase family (aconitate hydratase) VEJY3_22906 PF06965 Na+/H+ antiporter 1 VEJY3_22911 PF01145 SPFH domain / Band 7 family VEJY3_22916 PF01145 SPFH domain / Band 7 family VEJY3_22916 PF12221 Bacterial membrane protein N terminal VEJY3_22951 PF04851 Type III restriction enzyme, res subunit VEJY3_22991 PF07694 5TMR of 5TMR-LYT VEJY3_22991 PF00990 Diguanylate cyclase, GGDEF domain VEJY3_22996 PF00011 Hsp20/alpha crystallin family VEJY3_23006 PF00743 Flavin-binding monooxygenase-like VEJY3_23011 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term VEJY3_23011 PF12833 Helix-turn-helix domain VEJY3_23021 PF00155 Aminotransferase class I and II VEJY3_23031 PF01037 Lrp/AsnC ligand binding domain VEJY3_23051 PF03783 Curli production assembly/transport component CsgG VEJY3_23061 PF02028 BCCT, betaine/carnitine/choline family transporter VEJY3_23066 PF00072 Response regulator receiver domain VEJY3_23071 PF00512 His Kinase A (phospho-acceptor) domain VEJY3_23071 PF01627 Hpt domain VEJY3_23071 PF00072 Response regulator receiver domain VEJY3_23071 PF00672 HAMP domain VEJY3_23071 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_23071 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) VEJY3_23086 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_23091 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_23091 PF14785 Maltose transport system permease protein MalF P2 domain VEJY3_23096 PF01547 Bacterial extracellular solute-binding protein VEJY3_23101 PF00005 ABC transporter VEJY3_23101 PF08402 TOBE domain VEJY3_23106 PF02397 Bacterial sugar transferase VEJY3_23121 PF13614 AAA domain VEJY3_23121 PF02706 Chain length determinant protein VEJY3_23121 PF13807 G-rich domain on putative tyrosine kinase VEJY3_23131 PF13439 Glycosyltransferase Family 4 VEJY3_23131 PF00534 Glycosyl transferases group 1 VEJY3_23146 PF13439 Glycosyltransferase Family 4 VEJY3_23146 PF00534 Glycosyl transferases group 1 VEJY3_23166 PF16925 Tetracyclin repressor-like, C-terminal domain VEJY3_23166 PF00440 Bacterial regulatory proteins, tetR family VEJY3_23171 PF16884 N-terminal domain of oxidoreductase VEJY3_23171 PF00107 Zinc-binding dehydrogenase VEJY3_23176 PF13417 Glutathione S-transferase, N-terminal domain VEJY3_23181 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase VEJY3_23181 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase VEJY3_23186 PF13419 Haloacid dehalogenase-like hydrolase VEJY3_23191 PF00127 Copper binding proteins, plastocyanin/azurin family VEJY3_23201 PF01266 FAD dependent oxidoreductase VEJY3_23206 PF07992 Pyridine nucleotide-disulphide oxidoreductase VEJY3_23206 PF18113 Rubredoxin binding C-terminal domain VEJY3_23216 PF00848 Ring hydroxylating alpha subunit (catalytic domain) VEJY3_23216 PF00355 Rieske [2Fe-2S] domain VEJY3_23221 PF02028 BCCT, betaine/carnitine/choline family transporter VEJY3_23226 PF03466 LysR substrate binding domain VEJY3_23226 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_23231 PF00664 ABC transporter transmembrane region VEJY3_23231 PF00005 ABC transporter VEJY3_23236 PF00593 TonB dependent receptor VEJY3_23236 PF07715 TonB-dependent Receptor Plug Domain VEJY3_23241 PF00005 ABC transporter VEJY3_23246 PF01497 Periplasmic binding protein VEJY3_23251 PF01032 FecCD transport family VEJY3_23261 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VEJY3_23261 PF00529 HlyD membrane-fusion protein of T1SS VEJY3_23266 PF00005 ABC transporter VEJY3_23266 PF00664 ABC transporter transmembrane region VEJY3_23276 PF00196 Bacterial regulatory proteins, luxR family VEJY3_23281 PF00196 Bacterial regulatory proteins, luxR family VEJY3_23291 PF07726 ATPase family associated with various cellular activities (AAA) VEJY3_23291 PF17863 AAA lid domain VEJY3_23296 PF01882 Protein of unknown function DUF58 VEJY3_23311 PF13519 von Willebrand factor type A domain VEJY3_23321 PF00005 ABC transporter VEJY3_23326 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_23331 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_23336 PF12849 PBP superfamily domain VEJY3_23341 PF00672 HAMP domain VEJY3_23341 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VEJY3_23341 PF17200 Single Cache domain 2 VEJY3_23346 PF00271 Helicase conserved C-terminal domain VEJY3_23346 PF00270 DEAD/DEAH box helicase VEJY3_23356 PF01476 LysM domain VEJY3_23356 PF17969 L,D-transpeptidase C-terminal domain VEJY3_23356 PF03734 L,D-transpeptidase catalytic domain VEJY3_23361 PF03441 FAD binding domain of DNA photolyase VEJY3_23361 PF00875 DNA photolyase VEJY3_23366 PF13411 MerR HTH family regulatory protein VEJY3_23371 PF08349 Protein of unknown function (DUF1722) VEJY3_23376 PF01048 Phosphorylase superfamily VEJY3_23391 PF00990 Diguanylate cyclase, GGDEF domain VEJY3_23396 PF11742 Protein of unknown function (DUF3302) VEJY3_23401 PF00529 HlyD membrane-fusion protein of T1SS VEJY3_23401 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion VEJY3_23406 PF07155 ECF-type riboflavin transporter, S component VEJY3_23416 PF12801 4Fe-4S binding domain VEJY3_23416 PF12837 4Fe-4S binding domain VEJY3_23421 PF12838 4Fe-4S dicluster domain VEJY3_23421 PF12800 4Fe-4S binding domain VEJY3_23426 PF00583 Acetyltransferase (GNAT) family VEJY3_23441 PF12945 Flagellar protein YcgR VEJY3_23441 PF07238 PilZ domain VEJY3_23446 PF05362 Lon protease (S16) C-terminal proteolytic domain VEJY3_23446 PF13654 AAA domain VEJY3_23456 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain VEJY3_23456 PF00326 Prolyl oligopeptidase family VEJY3_23461 PF03466 LysR substrate binding domain VEJY3_23461 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_23466 PF02652 L-lactate permease VEJY3_23471 PF01070 FMN-dependent dehydrogenase VEJY3_23481 PF00924 Mechanosensitive ion channel VEJY3_23486 PF00194 Eukaryotic-type carbonic anhydrase VEJY3_23496 PF00313 'Cold-shock' DNA-binding domain VEJY3_23506 PF08240 Alcohol dehydrogenase GroES-like domain VEJY3_23506 PF00107 Zinc-binding dehydrogenase VEJY3_23511 PF00155 Aminotransferase class I and II VEJY3_23516 PF00990 Diguanylate cyclase, GGDEF domain VEJY3_23516 PF03707 Bacterial signalling protein N terminal repeat VEJY3_23516 PF13188 PAS domain VEJY3_23516 PF00563 EAL domain VEJY3_23531 PF00080 Copper/zinc superoxide dismutase (SODC) VEJY3_23536 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_23536 PF00512 His Kinase A (phospho-acceptor) domain VEJY3_23536 PF08448 PAS fold VEJY3_23536 PF13426 PAS domain VEJY3_23536 PF00072 Response regulator receiver domain VEJY3_23541 PF00486 Transcriptional regulatory protein, C terminal VEJY3_23541 PF00072 Response regulator receiver domain VEJY3_23556 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_23556 PF03466 LysR substrate binding domain VEJY3_23561 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily VEJY3_23586 PF00892 EamA-like transporter family VEJY3_23596 PF02321 Outer membrane efflux protein VEJY3_23606 PF13533 Biotin-lipoyl like VEJY3_23616 PF01594 AI-2E family transporter VEJY3_23621 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) VEJY3_23626 PF00175 Oxidoreductase NAD-binding domain VEJY3_23626 PF00970 Oxidoreductase FAD-binding domain VEJY3_23636 PF09905 DNA-binding protein VF530 VEJY3_23641 PF00768 D-alanyl-D-alanine carboxypeptidase VEJY3_23641 PF07943 Penicillin-binding protein 5, C-terminal domain VEJY3_23646 PF00561 alpha/beta hydrolase fold VEJY3_23661 PF01734 Patatin-like phospholipase VEJY3_23666 PF01914 MarC family integral membrane protein VEJY3_23671 PF00881 Nitroreductase family VEJY3_23681 PF00375 Sodium:dicarboxylate symporter family VEJY3_23686 PF06803 Protein of unknown function (DUF1232) VEJY3_23691 PF00128 Alpha amylase, catalytic domain VEJY3_23696 PF00912 Transglycosylase VEJY3_23701 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VEJY3_23701 PF02806 Alpha amylase, C-terminal all-beta domain VEJY3_23701 PF00128 Alpha amylase, catalytic domain VEJY3_23706 PF02446 4-alpha-glucanotransferase VEJY3_23711 PF00343 Carbohydrate phosphorylase VEJY3_23716 PF00196 Bacterial regulatory proteins, luxR family VEJY3_23716 PF17874 MalT-like TPR region VEJY3_23731 PF02630 SCO1/SenC VEJY3_23736 PF02378 Phosphotransferase system, EIIC VEJY3_23736 PF00367 phosphotransferase system, EIIB VEJY3_23741 PF03193 RsgA GTPase VEJY3_23746 PF00375 Sodium:dicarboxylate symporter family VEJY3_23751 PF08543 Phosphomethylpyrimidine kinase VEJY3_23761 PF03714 Bacterial pullanase-associated domain VEJY3_23761 PF18494 Pullulanase Ins domain VEJY3_23761 PF17967 Pullulanase N2 domain VEJY3_23761 PF11852 Domain of unknown function (DUF3372) VEJY3_23761 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VEJY3_23766 PF00128 Alpha amylase, catalytic domain VEJY3_23766 PF02903 Alpha amylase, N-terminal ig-like domain VEJY3_23776 PF07148 Maltose operon periplasmic protein precursor (MalM) VEJY3_23781 PF02264 LamB porin VEJY3_23786 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) VEJY3_23786 PF00128 Alpha amylase, catalytic domain VEJY3_23791 PF00356 Bacterial regulatory proteins, lacI family VEJY3_23796 PF02378 Phosphotransferase system, EIIC VEJY3_23796 PF00367 phosphotransferase system, EIIB VEJY3_23806 PF07690 Major Facilitator Superfamily VEJY3_23811 PF07715 TonB-dependent Receptor Plug Domain VEJY3_23811 PF00593 TonB dependent receptor VEJY3_23816 PF03466 LysR substrate binding domain VEJY3_23816 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_23821 PF01497 Periplasmic binding protein VEJY3_23826 PF01032 FecCD transport family VEJY3_23831 PF01032 FecCD transport family VEJY3_23836 PF00005 ABC transporter VEJY3_23841 PF00440 Bacterial regulatory proteins, tetR family VEJY3_23841 PF08360 QacR-like protein, C-terminal region VEJY3_23851 PF13533 Biotin-lipoyl like VEJY3_23856 PF01212 Beta-eliminating lyase VEJY3_23861 PF03222 Tryptophan/tyrosine permease family VEJY3_23876 PF04320 Protein with unknown function (DUF469) VEJY3_23891 PF00893 Small Multidrug Resistance protein VEJY3_23896 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_23896 PF03466 LysR substrate binding domain VEJY3_23906 PF00171 Aldehyde dehydrogenase family VEJY3_23911 PF00202 Aminotransferase class-III VEJY3_23916 PF03466 LysR substrate binding domain VEJY3_23916 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_23921 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain VEJY3_23921 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain VEJY3_23926 PF03466 LysR substrate binding domain VEJY3_23926 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family VEJY3_23931 PF06339 Ectoine synthase VEJY3_23936 PF00474 Sodium:solute symporter family VEJY3_23951 PF01266 FAD dependent oxidoreductase VEJY3_23956 PF01042 Endoribonuclease L-PSP VEJY3_23961 PF02423 Ornithine cyclodeaminase/mu-crystallin family VEJY3_23966 PF12833 Helix-turn-helix domain VEJY3_23966 PF02311 AraC-like ligand binding domain VEJY3_23996 PF08244 Glycosyl hydrolases family 32 C terminal VEJY3_23996 PF00251 Glycosyl hydrolases family 32 N-terminal domain VEJY3_24001 PF02435 Levansucrase/Invertase VEJY3_24006 PF00141 Peroxidase VEJY3_24016 PF00675 Insulinase (Peptidase family M16) VEJY3_24016 PF05193 Peptidase M16 inactive domain VEJY3_24021 PF08124 Polysaccharide lyase family 8, N terminal alpha-helical domain VEJY3_24021 PF02884 Polysaccharide lyase family 8, C-terminal beta-sandwich domain VEJY3_24021 PF02278 Polysaccharide lyase family 8, super-sandwich domain VEJY3_24026 PF09508 Lacto-N-biose phosphorylase N-terminal TIM barrel domain VEJY3_24026 PF17386 Lacto-N-biose phosphorylase C-terminal domain VEJY3_24026 PF17385 Lacto-N-biose phosphorylase central domain VEJY3_24031 PF07470 Glycosyl Hydrolase Family 88 VEJY3_24036 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain VEJY3_24036 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain VEJY3_24041 PF01370 NAD dependent epimerase/dehydratase family VEJY3_24046 PF00916 Sulfate permease family VEJY3_24046 PF01740 STAS domain VEJY3_24051 PF02837 Glycosyl hydrolases family 2, sugar binding domain VEJY3_24051 PF02836 Glycosyl hydrolases family 2, TIM barrel domain VEJY3_24051 PF02929 Beta galactosidase small chain VEJY3_24051 PF00703 Glycosyl hydrolases family 2 VEJY3_24051 PF16353 Domain of unknown function(DUF4981) VEJY3_24056 PF00480 ROK family VEJY3_24061 PF12729 Four helix bundle sensory module for signal transduction VEJY3_24061 PF00672 HAMP domain VEJY3_24061 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain VEJY3_24066 PF00005 ABC transporter VEJY3_24066 PF08352 Oligopeptide/dipeptide transporter, C-terminal region VEJY3_24071 PF12911 N-terminal TM domain of oligopeptide transport permease C VEJY3_24071 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_24076 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_24081 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VEJY3_24091 PF13186 Iron-sulfur cluster-binding domain VEJY3_24091 PF04055 Radical SAM superfamily VEJY3_24096 PF00884 Sulfatase VEJY3_24101 PF00884 Sulfatase VEJY3_24101 PF16385 Domain of unknown function VEJY3_24106 PF01497 Periplasmic binding protein VEJY3_24111 PF07715 TonB-dependent Receptor Plug Domain VEJY3_24111 PF07660 Secretin and TonB N terminus short domain VEJY3_24111 PF00593 TonB dependent receptor VEJY3_24121 PF02653 Branched-chain amino acid transport system / permease component VEJY3_24126 PF00005 ABC transporter VEJY3_24131 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family VEJY3_24136 PF02782 FGGY family of carbohydrate kinases, C-terminal domain VEJY3_24136 PF00370 FGGY family of carbohydrate kinases, N-terminal domain VEJY3_24141 PF00596 Class II Aldolase and Adducin N-terminal domain VEJY3_24146 PF02610 L-arabinose isomerase VEJY3_24146 PF11762 L-arabinose isomerase C-terminal domain VEJY3_24151 PF02311 AraC-like ligand binding domain VEJY3_24151 PF12833 Helix-turn-helix domain VEJY3_24156 PF01263 Aldose 1-epimerase VEJY3_24161 PF04616 Glycosyl hydrolases family 43 VEJY3_24161 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain VEJY3_24176 PF00528 Binding-protein-dependent transport system inner membrane component VEJY3_24181 PF00005 ABC transporter VEJY3_24186 PF04069 Substrate binding domain of ABC-type glycine betaine transport system VEJY3_24191 PF00202 Aminotransferase class-III VEJY3_24196 PF00155 Aminotransferase class I and II VEJY3_24196 PF00392 Bacterial regulatory proteins, gntR family VEJY3_24206 PF00106 short chain dehydrogenase VEJY3_24211 PF00005 ABC transporter VEJY3_24231 PF02566 OsmC-like protein VEJY3_24236 PF01047 MarR family VEJY3_24241 PF00578 AhpC/TSA family VEJY3_24241 PF10417 C-terminal domain of 1-Cys peroxiredoxin VEJY3_24246 PF07992 Pyridine nucleotide-disulphide oxidoreductase VEJY3_24246 PF13192 Thioredoxin domain VEJY3_24251 PF00884 Sulfatase VEJY3_24271 PF01037 Lrp/AsnC ligand binding domain VEJY3_24281 PF00474 Sodium:solute symporter family VEJY3_24291 PF14850 DNA-binding domain of Proline dehydrogenase VEJY3_24291 PF01619 Proline dehydrogenase VEJY3_24291 PF00171 Aldehyde dehydrogenase family VEJY3_24291 PF18327 Proline utilization A proline dehydrogenase N-terminal domain VEJY3_24296 PF12833 Helix-turn-helix domain VEJY3_24311 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region VEJY3_24311 PF01243 Pyridoxamine 5'-phosphate oxidase VEJY3_24316 PF00512 His Kinase A (phospho-acceptor) domain VEJY3_24316 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase VEJY3_24316 PF02743 Cache domain VEJY3_24321 PF00158 Sigma-54 interaction domain VEJY3_24321 PF00072 Response regulator receiver domain VEJY3_24321 PF02954 Bacterial regulatory protein, Fis family VEJY3_24326 PF00529 HlyD membrane-fusion protein of T1SS VEJY3_24341 PF00005 ABC transporter VEJY3_24341 PF00664 ABC transporter transmembrane region VEJY3_24341 PF03412 Peptidase C39 family VEJY3_24356 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle VEJY3_24361 PF00246 Zinc carboxypeptidase VEJY3_24371 PF05127 Helicase VEJY3_24371 PF13718 GNAT acetyltransferase 2 VEJY3_24376 PF02195 ParB-like nuclease domain VEJY3_24376 PF08775 ParB family VEJY3_24381 PF18607 ParA helix turn helix domain VEJY3_24381 PF13614 AAA domain