locus-tag	class	description
VEJY3_00010	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
VEJY3_00020	COG0706	membrane insertase activity
VEJY3_00025	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
VEJY3_00030	COG0594	ribonuclease P activity
VEJY3_00040	COG1126	abc transporter atp-binding protein
VEJY3_00060	COG0592	DNA-directed DNA polymerase activity
VEJY3_00065	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
VEJY3_00070	COG0187	DNA topoisomerase II activity
VEJY3_00080	COG0071	Belongs to the small heat shock protein (HSP20) family
VEJY3_00085	COG3977	Valine--pyruvate aminotransferase
VEJY3_00090	COG0366	Alpha amylase catalytic
VEJY3_00095	COG0751	glycine-tRNA ligase activity
VEJY3_00105	COG2119	membrane
VEJY3_00115	COG0425	Belongs to the sulfur carrier protein TusA family
VEJY3_00130	COG0604	alcohol dehydrogenase
VEJY3_00135	COG0183	Belongs to the thiolase family
VEJY3_00140	COG1250	3-hydroxyacyl-CoA dehydrogenase
VEJY3_00140	COG1024	Enoyl-CoA hydratase
VEJY3_00145	COG1739	Uncharacterized protein family UPF0029
VEJY3_00150	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
VEJY3_00160	COG0583	DNA-binding transcription factor activity
VEJY3_00165	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
VEJY3_00170	COG2960	long-chain fatty acid transporting porin activity
VEJY3_00175	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
VEJY3_00180	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
VEJY3_00185	COG1309	transcriptional regulator
VEJY3_00210	COG4172	Belongs to the ABC transporter superfamily
VEJY3_00215	COG4166	transmembrane transport
VEJY3_00225	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
VEJY3_00235	COG1609	Transcriptional regulator
VEJY3_00240	COG0129	dihydroxy-acid dehydratase activity
VEJY3_00245	COG3265	gluconokinase activity
VEJY3_00250	COG2610	gluconate transmembrane transporter activity
VEJY3_00255	COG0800	Aldolase
VEJY3_00260	COG3721	Heme iron utilization protein
VEJY3_00265	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
VEJY3_00270	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
VEJY3_00280	COG1522	sequence-specific DNA binding
VEJY3_00285	COG0742	ribosomal rna small subunit methyltransferase
VEJY3_00295	COG0697	spore germination
VEJY3_00300	COG0589	response to stress
VEJY3_00305	COG1528	Iron-storage protein
VEJY3_00315	COG2081	HI0933 family
VEJY3_00345	COG4964	Belongs to the GSP D family
VEJY3_00395	COG0748	coenzyme F420 binding
VEJY3_00405	COG4988	ABC transporter
VEJY3_00410	COG1132	(ABC) transporter
VEJY3_00430	COG1322	Protein conserved in bacteria
VEJY3_00435	COG2226	methyltransferase
VEJY3_00440	COG3165	ubiquinone biosynthetic process from chorismate
VEJY3_00445	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
VEJY3_00460	COG0805	protein transport
VEJY3_00465	COG3263	regulation of cellular component size
VEJY3_00470	COG0084	hydrolase, TatD family'
VEJY3_00490	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
VEJY3_00490	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
VEJY3_00495	COG0218	Necessary for normal cell division and for the maintenance of normal septation
VEJY3_00520	COG0635	Involved in the biosynthesis of porphyrin-containing compound
VEJY3_00525	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
VEJY3_00535	COG2204	response regulator
VEJY3_00540	COG3852	Histidine kinase
VEJY3_00550	COG0174	glutamine synthetase
VEJY3_00570	COG1295	ribonuclease BN
VEJY3_00575	COG1490	D-aminoacyl-tRNA deacylase activity
VEJY3_00580	COG0456	acetyltransferase
VEJY3_00590	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
VEJY3_00595	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
VEJY3_00600	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
VEJY3_00605	COG3031	protein transport across the cell outer membrane
VEJY3_00615	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
VEJY3_00620	COG1459	type II secretion system
VEJY3_00625	COG2165	general secretion pathway protein
VEJY3_00630	COG2165	general secretion pathway protein
VEJY3_00635	COG2165	general secretion pathway protein
VEJY3_00640	COG4795	General secretion pathway protein
VEJY3_00645	COG3156	type II secretion system protein K
VEJY3_00650	COG3297	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
VEJY3_00655	COG3149	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
VEJY3_00665	COG1218	3'(2'),5'-bisphosphate nucleotidase
VEJY3_00670	COG0494	nUDIX hydrolase
VEJY3_00680	COG1040	competence protein
VEJY3_00685	COG0596	Alpha beta hydrolase
VEJY3_00695	COG2183	response to ionizing radiation
VEJY3_00705	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
VEJY3_00715	COG0745	RESPONSE REGULATOR receiver
VEJY3_00725	COG2233	PERMEase
VEJY3_00730	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
VEJY3_00735	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
VEJY3_00740	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
VEJY3_00745	COG1758	RNA polymerase activity
VEJY3_00750	COG0194	GDP metabolic process
VEJY3_00765	COG0848	biopolymer transport protein
VEJY3_00770	COG0811	peptide transport
VEJY3_00790	COG4174	ABC transporter (Permease)
VEJY3_00795	COG4239	(ABC) transporter, permease
VEJY3_00805	COG0444	Belongs to the ABC transporter superfamily
VEJY3_00810	COG4608	Belongs to the ABC transporter superfamily
VEJY3_00835	COG1561	YicC-like family, N-terminal region
VEJY3_00840	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
VEJY3_00845	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
VEJY3_00850	COG1560	Kdo2-lipid A biosynthetic process
VEJY3_00855	COG1309	transcriptional regulator
VEJY3_00860	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
VEJY3_00865	COG2003	Belongs to the UPF0758 family
VEJY3_00885	COG0266	class I DNA-(apurinic or apyrimidinic site) endonuclease activity
VEJY3_00895	COG0438	transferase activity, transferring glycosyl groups
VEJY3_00900	COG0859	PFAM glycosyl transferase family 9
VEJY3_00910	COG0438	transferase activity, transferring glycosyl groups
VEJY3_00915	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
VEJY3_00920	COG3642	lipopolysaccharide core region biosynthetic process
VEJY3_00925	COG0562	UDP-galactopyranose mutase
VEJY3_00940	COG1519	Transferase
VEJY3_00945	COG0859	PFAM glycosyl transferase family 9
VEJY3_00950	COG1560	Kdo2-lipid A biosynthetic process
VEJY3_00960	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
VEJY3_00990	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
VEJY3_01055	COG1482	cell wall glycoprotein biosynthetic process
VEJY3_01060	COG1215	transferase activity, transferring glycosyl groups
VEJY3_01065	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
VEJY3_01070	COG1596	polysaccharide export
VEJY3_01090	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
VEJY3_01100	COG2244	polysaccharide biosynthetic process
VEJY3_01120	COG0438	transferase activity, transferring glycosyl groups
VEJY3_01125	COG1215	transferase activity, transferring glycosyl groups
VEJY3_01140	COG1216	Glycosyl transferase, family 2
VEJY3_01145	COG0297	glycogen (starch) synthase activity
VEJY3_01150	COG0438	transferase activity, transferring glycosyl groups
VEJY3_01165	COG1482	cell wall glycoprotein biosynthetic process
VEJY3_01170	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
VEJY3_01185	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
VEJY3_01195	COG0149	triose-phosphate isomerase activity
VEJY3_01210	COG3152	Membrane
VEJY3_01225	COG1494	fructose-1,6-bisphosphatase
VEJY3_01235	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
VEJY3_01240	COG1575	Belongs to the MenA family. Type 1 subfamily
VEJY3_01245	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
VEJY3_01260	COG1609	Transcriptional regulator
VEJY3_01265	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
VEJY3_01270	COG0254	rRNA binding
VEJY3_01280	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
VEJY3_01285	COG0088	Forms part of the polypeptide exit tunnel
VEJY3_01295	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
VEJY3_01300	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
VEJY3_01305	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
VEJY3_01310	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
VEJY3_01320	COG0255	Belongs to the universal ribosomal protein uL29 family
VEJY3_01325	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
VEJY3_01335	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
VEJY3_01340	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
VEJY3_01355	COG0097	This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center
VEJY3_01370	COG1841	ribosomal large subunit assembly
VEJY3_01380	COG0201	protein transport
VEJY3_01390	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
VEJY3_01395	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
VEJY3_01410	COG0203	ribosomal protein L17
VEJY3_01420	COG0545	Peptidyl-prolyl cis-trans isomerase
VEJY3_01430	COG2153	protein acetylation
VEJY3_01435	COG0513	Belongs to the DEAD box helicase family
VEJY3_01445	COG0737	Belongs to the 5'-nucleotidase family
VEJY3_01450	COG1648	precorrin-2 dehydrogenase activity
VEJY3_01450	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
VEJY3_01455	COG0175	sulfate reduction
VEJY3_01460	COG2895	sulfate adenylyltransferase (ATP) activity
VEJY3_01465	COG0471	metal ion transport
VEJY3_01465	COG3273	potassium ion transport
VEJY3_01470	COG0529	Catalyzes the synthesis of activated sulfate
VEJY3_01490	COG1136	(ABC) transporter
VEJY3_01505	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
VEJY3_01515	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
VEJY3_01525	COG2911	Protein conserved in bacteria
VEJY3_01530	COG2105	PFAM AIG2 family protein
VEJY3_01535	COG0221	Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions
VEJY3_01540	COG0158	D-fructose-1,6-bisphosphate 1-phosphohydrolase class 1
VEJY3_01545	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
VEJY3_01550	COG0163	prenyltransferase activity
VEJY3_01555	COG4143	(ABC) transporter
VEJY3_01560	COG1178	ABC-type Fe3 transport system permease component
VEJY3_01565	COG3840	Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system
VEJY3_01570	COG0589	response to stress
VEJY3_01590	COG0039	L-malate dehydrogenase activity
VEJY3_01600	COG0142	geranyltranstransferase activity
VEJY3_01605	COG0261	This protein binds to 23S rRNA in the presence of protein L20
VEJY3_01615	COG0536	An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control
VEJY3_01620	COG2966	Psort location CytoplasmicMembrane, score
VEJY3_01630	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
VEJY3_01640	COG2967	ApaG domain
VEJY3_01645	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
VEJY3_01650	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
VEJY3_01655	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
VEJY3_01660	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
VEJY3_01665	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
VEJY3_01675	COG0066	3-isopropylmalate dehydratase activity
VEJY3_01685	COG0473	3-isopropylmalate dehydrogenase activity
VEJY3_01690	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
VEJY3_01700	COG0671	phosphoesterase, PA-phosphatase related
VEJY3_01710	COG0583	DNA-binding transcription factor activity
VEJY3_01715	COG1022	Amp-dependent synthetase and ligase
VEJY3_01720	COG0028	Belongs to the TPP enzyme family
VEJY3_01725	COG0440	acetolactate synthase activity
VEJY3_01730	COG0469	pyruvate kinase activity
VEJY3_01735	COG1349	DNA-binding transcription factor activity
VEJY3_01740	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
VEJY3_01750	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
VEJY3_01750	COG1263	PTS System
VEJY3_01755	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
VEJY3_01760	COG3722	fumarate hydratase activity
VEJY3_01765	COG0246	Mannitol dehydrogenase
VEJY3_01770	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
VEJY3_01770	COG2213	PTS system mannitol-specific
VEJY3_01805	COG1464	Belongs to the NlpA lipoprotein family
VEJY3_01810	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
VEJY3_01815	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
VEJY3_01820	COG0358	DNA primase activity
VEJY3_01825	COG1610	YqeY-like protein
VEJY3_01830	COG0828	Belongs to the bacterial ribosomal protein bS21 family
VEJY3_01835	COG0533	Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction
VEJY3_01840	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
VEJY3_01845	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
VEJY3_01850	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
VEJY3_01855	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
VEJY3_01860	COG1968	undecaprenyl-diphosphatase activity
VEJY3_01865	COG0617	tRNA 3'-terminal CCA addition
VEJY3_01870	COG3267	Type II secretory pathway component ExeA
VEJY3_01870	COG3409	Peptidoglycan-binding domain 1 protein
VEJY3_01880	COG4991	sh3 domain protein
VEJY3_01885	COG0306	phosphate transporter
VEJY3_01890	COG1392	Phosphate transport regulator
VEJY3_01895	COG3025	triphosphatase activity
VEJY3_01910	COG1391	[glutamine synthetase]-adenylyl-L-tyrosine phosphorylase
VEJY3_01920	COG1538	Outer membrane efflux protein
VEJY3_01925	COG0494	nUDIX hydrolase
VEJY3_01930	COG3151	Protein conserved in bacteria
VEJY3_01940	COG3150	esterase
VEJY3_01945	COG0187	DNA topoisomerase II activity
VEJY3_01950	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
VEJY3_01955	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
VEJY3_01965	COG3105	Protein conserved in bacteria
VEJY3_01970	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
VEJY3_01975	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
VEJY3_01980	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
VEJY3_01985	COG0723	plastoquinol--plastocyanin reductase activity
VEJY3_01990	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
VEJY3_01995	COG2857	Cytochrome c1
VEJY3_02000	COG0625	glutathione transferase activity
VEJY3_02005	COG2969	positive regulation of protein catabolic process
VEJY3_02010	COG2823	Periplasmic or secreted lipoprotein
VEJY3_02015	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
VEJY3_02030	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
VEJY3_02040	COG0275	rRNA processing
VEJY3_02045	COG3116	cell division
VEJY3_02050	COG0768	penicillin binding
VEJY3_02055	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
VEJY3_02060	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
VEJY3_02065	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
VEJY3_02070	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
VEJY3_02075	COG0772	Belongs to the SEDS family
VEJY3_02080	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
VEJY3_02085	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
VEJY3_02090	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
VEJY3_02095	COG0849	cell division
VEJY3_02100	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
VEJY3_02105	COG0774	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
VEJY3_02115	COG0653	protein targeting
VEJY3_02120	COG0494	nUDIX hydrolase
VEJY3_02130	COG0505	Belongs to the CarA family
VEJY3_02135	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
VEJY3_02140	COG0730	response to heat
VEJY3_02145	COG0583	DNA-binding transcription factor activity
VEJY3_02150	COG2860	membrane
VEJY3_02155	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
VEJY3_02165	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
VEJY3_02175	COG0493	'glutamate synthase
VEJY3_02180	COG0070	glutamate synthase
VEJY3_02180	COG0069	glutamate synthase activity
VEJY3_02180	COG0067	glutamate synthase
VEJY3_02190	COG0067	glutamate synthase
VEJY3_02190	COG0070	glutamate synthase
VEJY3_02190	COG0069	glutamate synthase activity
VEJY3_02195	COG1242	4 iron, 4 sulfur cluster binding
VEJY3_02200	COG0784	Response regulator, receiver
VEJY3_02200	COG2198	Histidine kinase
VEJY3_02200	COG5002	protein histidine kinase activity
VEJY3_02210	COG0745	RESPONSE REGULATOR receiver
VEJY3_02220	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
VEJY3_02235	COG0083	homoserine kinase activity
VEJY3_02240	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
VEJY3_02245	COG3445	Acts as a radical domain for damaged PFL and possibly other radical proteins
VEJY3_02250	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
VEJY3_02255	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
VEJY3_02270	COG1115	amino acid carrier protein
VEJY3_02275	COG3022	response to hydroperoxide
VEJY3_02280	COG0513	Belongs to the DEAD box helicase family
VEJY3_02285	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
VEJY3_02295	COG0716	FMN binding
VEJY3_02305	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
VEJY3_02310	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
VEJY3_02315	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
VEJY3_02320	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
VEJY3_02325	COG3829	transcription factor binding
VEJY3_02325	COG3290	protein histidine kinase activity
VEJY3_02335	COG0667	Aldo Keto reductase
VEJY3_02345	COG3066	DNA modification
VEJY3_02360	COG0730	response to heat
VEJY3_02365	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
VEJY3_02370	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
VEJY3_02380	COG1283	sodium-dependent phosphate transmembrane transporter activity
VEJY3_02385	COG0583	DNA-binding transcription factor activity
VEJY3_02390	COG0640	Transcriptional regulator
VEJY3_02395	COG0268	Binds directly to 16S ribosomal RNA
VEJY3_02400	COG0728	peptidoglycan biosynthetic process
VEJY3_02405	COG0196	riboflavin kinase activity
VEJY3_02410	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
VEJY3_02415	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
VEJY3_02420	COG1047	Peptidyl-prolyl cis-trans
VEJY3_02425	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
VEJY3_02430	COG3279	Response regulator of the LytR AlgR family
VEJY3_02435	COG3275	phosphorelay sensor kinase activity
VEJY3_02440	COG1966	Carbon starvation protein
VEJY3_02460	COG2377	Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling
VEJY3_02465	COG1472	Belongs to the glycosyl hydrolase 3 family
VEJY3_02470	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
VEJY3_02475	COG0287	Prephenate dehydrogenase
VEJY3_02475	COG1605	Chorismate mutase
VEJY3_02480	COG0739	heme binding
VEJY3_02485	COG0488	(ABC) transporter
VEJY3_02495	COG2973	This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon (5'- ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region
VEJY3_02500	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
VEJY3_02505	COG0077	Prephenate dehydratase
VEJY3_02505	COG1605	Chorismate mutase
VEJY3_02510	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
VEJY3_02515	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
VEJY3_02520	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
VEJY3_02525	COG0564	pseudouridine synthase activity
VEJY3_02535	COG0542	response to heat
VEJY3_02550	COG1116	anion transmembrane transporter activity
VEJY3_02570	COG3770	Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus
VEJY3_02580	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
VEJY3_02600	COG0745	RESPONSE REGULATOR receiver
VEJY3_02605	COG5002	protein histidine kinase activity
VEJY3_02615	COG0248	Ppx GppA phosphatase
VEJY3_02620	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
VEJY3_02630	COG0581	inorganic phosphate transmembrane transporter activity
VEJY3_02635	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
VEJY3_02640	COG0704	Plays a role in the regulation of phosphate uptake
VEJY3_02650	COG3142	Participates in the control of copper homeostasis
VEJY3_02655	COG0450	alkyl hydroperoxide reductase
VEJY3_02660	COG0583	DNA-binding transcription factor activity
VEJY3_02665	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
VEJY3_02675	COG0517	IMP dehydrogenase activity
VEJY3_02685	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
VEJY3_02690	COG0343	queuine tRNA-ribosyltransferase activity
VEJY3_02695	COG1862	Preprotein translocase
VEJY3_02700	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
VEJY3_02705	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
VEJY3_02710	COG0483	inositol monophosphate 1-phosphatase activity
VEJY3_02715	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
VEJY3_02725	COG1104	cysteine desulfurase activity
VEJY3_02730	COG0822	iron-sulfur transferase activity
VEJY3_02745	COG0443	Heat shock 70 kDa protein
VEJY3_02750	COG0633	Ferredoxin
VEJY3_02755	COG2975	iron-sulfur cluster assembly
VEJY3_02760	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
VEJY3_02765	COG0105	UTP biosynthetic process
VEJY3_02780	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
VEJY3_02790	COG2976	Protein conserved in bacteria
VEJY3_02795	COG1520	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
VEJY3_02800	COG1160	GTP binding
VEJY3_02820	COG0516	GMP reductase activity
VEJY3_02820	COG0517	IMP dehydrogenase activity
VEJY3_02825	COG0519	Catalyzes the synthesis of GMP from XMP
VEJY3_02825	COG0518	GMP synthase (glutamine-hydrolyzing) activity
VEJY3_02830	COG1584	GPR1 FUN34 yaaH family protein
VEJY3_02845	COG1473	amidohydrolase
VEJY3_02855	COG1115	amino acid carrier protein
VEJY3_02860	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
VEJY3_02870	COG2873	o-acetylhomoserine
VEJY3_02875	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
VEJY3_02895	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
VEJY3_02895	COG3153	acetyltransferase
VEJY3_02900	COG0583	DNA-binding transcription factor activity
VEJY3_02905	COG0235	Class ii aldolase
VEJY3_02910	COG4806	L-rhamnose isomerase
VEJY3_02915	COG1070	Carbohydrate kinase
VEJY3_02920	COG3254	rhamnose metabolic process
VEJY3_02955	COG2197	response regulator
VEJY3_02960	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
VEJY3_02965	COG2867	negative regulation of translational initiation
VEJY3_02970	COG2914	Belongs to the UPF0125 (RnfH) family
VEJY3_02975	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
VEJY3_02980	COG0497	DNA recombination
VEJY3_02985	COG0061	Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP
VEJY3_02990	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
VEJY3_02995	COG1301	dicarboxylic acid transport
VEJY3_03005	COG0484	heat shock protein binding
VEJY3_03035	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
VEJY3_03040	COG0590	tRNA wobble adenosine to inosine editing
VEJY3_03045	COG4623	carbon-oxygen lyase activity, acting on polysaccharides
VEJY3_03050	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
VEJY3_03050	COG0047	phosphoribosylformylglycinamidine synthase activity
VEJY3_03085	COG2195	Cleaves the N-terminal amino acid of tripeptides
VEJY3_03090	COG2252	PERMEase
VEJY3_03095	COG2236	Acts on guanine, xanthine and to a lesser extent hypoxanthine
VEJY3_03110	COG0263	Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate
VEJY3_03115	COG0014	Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate
VEJY3_03120	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
VEJY3_03125	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
VEJY3_03125	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
VEJY3_03150	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
VEJY3_03155	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
VEJY3_03165	COG0142	geranyltranstransferase activity
VEJY3_03175	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
VEJY3_03180	COG2885	chlorophyll binding
VEJY3_03185	COG0301	tRNA thio-modification
VEJY3_03185	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
VEJY3_03190	COG0583	DNA-binding transcription factor activity
VEJY3_03200	COG2363	Small membrane protein
VEJY3_03210	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
VEJY3_03215	COG1611	Belongs to the LOG family
VEJY3_03220	COG0745	RESPONSE REGULATOR receiver
VEJY3_03220	COG3706	GGDEF domain
VEJY3_03230	COG2904	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
VEJY3_03230	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
VEJY3_03240	COG5595	Zn-ribbon-containing, possibly nucleic-acid-binding protein (DUF2310)
VEJY3_03245	COG1464	Belongs to the NlpA lipoprotein family
VEJY3_03250	COG2011	ABC-type metal ion transport system permease component
VEJY3_03255	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
VEJY3_03260	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
VEJY3_03270	COG1263	PTS System
VEJY3_03270	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
VEJY3_03275	COG0366	Alpha amylase catalytic
VEJY3_03285	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
VEJY3_03290	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
VEJY3_03295	COG0321	lipoyl(octanoyl) transferase activity
VEJY3_03305	COG1686	Belongs to the peptidase S11 family
VEJY3_03310	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
VEJY3_03315	COG0772	Belongs to the SEDS family
VEJY3_03320	COG0768	penicillin binding
VEJY3_03330	COG0799	negative regulation of ribosome biogenesis
VEJY3_03335	COG1466	dna polymerase III delta subunit
VEJY3_03340	COG2980	Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane
VEJY3_03345	COG0495	leucyl-tRNA aminoacylation
VEJY3_03350	COG2888	peptidyl-tyrosine sulfation
VEJY3_03355	COG0815	Transfers the fatty acyl group on membrane lipoproteins
VEJY3_03360	COG4535	Mg2 and Co2 transporter CorC
VEJY3_03370	COG1702	phosphate starvation-inducible protein PhoH
VEJY3_03375	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
VEJY3_03380	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
VEJY3_03385	COG0012	GTP binding
VEJY3_03395	COG0462	Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P)
VEJY3_03400	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
VEJY3_03405	COG3017	Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein
VEJY3_03410	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
VEJY3_03420	COG2890	protein-(glutamine-N5) methyltransferase activity
VEJY3_03425	COG3094	Invasion gene expression up-regulator, SirB
VEJY3_03430	COG2912	Transglutaminase-like superfamily
VEJY3_03435	COG2877	3-deoxy-8-phosphooctulonate synthase activity
VEJY3_03440	COG0737	Belongs to the 5'-nucleotidase family
VEJY3_03445	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
VEJY3_03450	COG1187	pseudouridine synthase activity
VEJY3_03455	COG2840	Smr protein MutS2
VEJY3_03485	COG2608	mercury ion transmembrane transporter activity
VEJY3_03485	COG2217	Heavy metal translocating P-type atpase
VEJY3_03535	COG0784	Response regulator, receiver
VEJY3_03535	COG0835	chemotaxis
VEJY3_03540	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
VEJY3_03545	COG1815	bacterial-type flagellum-dependent cell motility
VEJY3_03550	COG1558	bacterial-type flagellum-dependent cell motility
VEJY3_03555	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
VEJY3_03560	COG1749	Flagellar hook protein flgE
VEJY3_03565	COG4787	bacterial-type flagellum-dependent cell motility
VEJY3_03570	COG4786	Flagellar basal body rod
VEJY3_03575	COG2063	Assembles around the rod to form the L-ring and probably protects the motor basal body from shearing forces during rotation
VEJY3_03580	COG1706	bacterial-type flagellum-dependent cell motility
VEJY3_03585	COG1705	Flagellar rod assembly protein muramidase FlgJ
VEJY3_03585	COG3951	Flagellar rod assembly protein muramidase FlgJ
VEJY3_03595	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
VEJY3_03600	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
VEJY3_03605	COG2190	(PTS) system
VEJY3_03610	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
VEJY3_03615	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
VEJY3_03620	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
VEJY3_03625	COG2981	High affinity, high specificity proton-dependent sulfate transporter, which mediates sulfate uptake. Provides the sulfur source for the cysteine synthesis pathway
VEJY3_03630	COG3115	cell septum assembly
VEJY3_03635	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
VEJY3_03660	COG0330	HflC and HflK could
VEJY3_03665	COG3118	belongs to the thioredoxin family
VEJY3_03670	COG0300	oxidoreductase activity
VEJY3_03675	COG1090	epimerase
VEJY3_03705	COG0622	Phosphoesterase
VEJY3_03725	COG3710	Transcriptional regulator
VEJY3_03730	COG0326	Molecular chaperone. Has ATPase activity
VEJY3_03740	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
VEJY3_03745	COG3104	oligopeptide transport
VEJY3_03750	COG0250	Participates in transcription elongation, termination and antitermination
VEJY3_03755	COG0367	asparagine synthase
VEJY3_03760	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
VEJY3_03760	COG4651	solute:proton antiporter activity
VEJY3_03765	COG1940	carbohydrate kinase activity
VEJY3_03765	COG1846	Transcriptional regulator
VEJY3_03770	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
VEJY3_03775	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
VEJY3_03775	COG1263	PTS System
VEJY3_03775	COG2190	(PTS) system
VEJY3_03780	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
VEJY3_03785	COG0735	belongs to the Fur family
VEJY3_03795	COG0716	FMN binding
VEJY3_03805	COG0596	Alpha beta hydrolase
VEJY3_03815	COG0033	Phosphoglucomutase
VEJY3_03825	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
VEJY3_03835	COG2009	succinate dehydrogenase
VEJY3_03840	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
VEJY3_03845	COG1053	succinate dehydrogenase
VEJY3_03855	COG0567	Dehydrogenase, E1 component
VEJY3_03860	COG0508	dehydrogenase complex catalyzes the overall conversion of
VEJY3_03865	COG0045	succinate-CoA ligase (ADP-forming) activity
VEJY3_03875	COG1108	ABC-type Mn2 Zn2 transport systems permease components
VEJY3_03880	COG1121	(ABC) transporter
VEJY3_03885	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
VEJY3_03890	COG4977	sequence-specific DNA binding
VEJY3_03895	COG1918	ferrous iron import across plasma membrane
VEJY3_03915	COG0018	arginyl-trna synthetase
VEJY3_03920	COG3102	Protein conserved in bacteria
VEJY3_03935	COG0788	formyltetrahydrofolate deformylase activity
VEJY3_03940	COG1199	ATP-dependent helicase activity
VEJY3_03945	COG1214	PFAM Peptidase M22, glycoprotease
VEJY3_03960	COG2267	carboxylic ester hydrolase activity
VEJY3_03965	COG0318	PFAM AMP-dependent synthetase and ligase
VEJY3_03970	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
VEJY3_03975	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
VEJY3_03980	COG2894	cell division
VEJY3_03995	COG2951	lytic endotransglycosylase activity
VEJY3_04000	COG0583	DNA-binding transcription factor activity
VEJY3_04005	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
VEJY3_04010	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
VEJY3_04060	COG1028	Short-chain dehydrogenase reductase Sdr
VEJY3_04070	COG1169	isochorismate synthase
VEJY3_04075	COG1021	2,3-dihydroxybenzoate-AMP ligase
VEJY3_04080	COG1535	isochorismatase
VEJY3_04080	COG3433	isochorismatase activity
VEJY3_04085	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
VEJY3_04085	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
VEJY3_04100	COG4771	TonB-dependent receptor
VEJY3_04105	COG1253	flavin adenine dinucleotide binding
VEJY3_04110	COG0513	Belongs to the DEAD box helicase family
VEJY3_04115	COG0569	domain protein
VEJY3_04120	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
VEJY3_04130	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
VEJY3_04135	COG0745	RESPONSE REGULATOR receiver
VEJY3_04155	COG0395	ABC-type sugar transport system, permease component
VEJY3_04160	COG3842	ATPase activity
VEJY3_04165	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
VEJY3_04170	COG3090	Trap-type c4-dicarboxylate transport system, small permease component
VEJY3_04175	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
VEJY3_04210	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
VEJY3_04215	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
VEJY3_04220	COG0776	regulation of translation
VEJY3_04225	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
VEJY3_04230	COG1555	photosystem II stabilization
VEJY3_04245	COG0232	Belongs to the dGTPase family. Type 2 subfamily
VEJY3_04250	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
VEJY3_04255	COG0436	Aminotransferase
VEJY3_04260	COG1169	isochorismate synthase
VEJY3_04265	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
VEJY3_04270	COG0596	Alpha beta hydrolase
VEJY3_04275	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
VEJY3_04280	COG1441	menaquinone biosynthetic process
VEJY3_04295	COG2855	membrane
VEJY3_04300	COG0477	Major facilitator Superfamily
VEJY3_04315	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
VEJY3_04320	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
VEJY3_04335	COG1522	sequence-specific DNA binding
VEJY3_04340	COG1946	Acyl-CoA thioesterase
VEJY3_04345	COG3126	Type III secretion system lipoprotein chaperone (YscW)
VEJY3_04360	COG0583	DNA-binding transcription factor activity
VEJY3_04370	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
VEJY3_04375	COG0174	glutamine synthetase
VEJY3_04380	COG0174	glutamine synthetase
VEJY3_04390	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
VEJY3_04395	COG3842	ATPase activity
VEJY3_04400	COG1176	ABC-type spermidine putrescine transport system, permease component I
VEJY3_04405	COG1177	transmembrane transport
VEJY3_04415	COG1012	belongs to the aldehyde dehydrogenase family
VEJY3_04420	COG0519	Catalyzes the synthesis of GMP from XMP
VEJY3_04425	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
VEJY3_04430	COG1146	Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions
VEJY3_04435	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
VEJY3_04440	COG0517	IMP dehydrogenase activity
VEJY3_04440	COG0516	GMP reductase activity
VEJY3_04465	COG0537	adenosine 5'-monophosphoramidase activity
VEJY3_04490	COG3150	esterase
VEJY3_04495	COG1252	NADH dehydrogenase
VEJY3_04510	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
VEJY3_04520	COG4591	ABC-type transport system involved in lipoprotein release permease component
VEJY3_04525	COG1136	(ABC) transporter
VEJY3_04530	COG4591	ABC-type transport system involved in lipoprotein release permease component
VEJY3_04540	COG0658	competence protein
VEJY3_04540	COG2333	competence protein COMEC
VEJY3_04545	COG1132	(ABC) transporter
VEJY3_04560	COG1212	Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria
VEJY3_04570	COG2719	SpoVR family
VEJY3_04575	COG2718	Belongs to the UPF0229 family
VEJY3_04580	COG2766	serine protein kinase
VEJY3_04595	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
VEJY3_04605	COG1882	Formate acetyltransferase
VEJY3_04630	COG4215	(ABC) transporter
VEJY3_04640	COG0708	Exodeoxyribonuclease III
VEJY3_04650	COG0583	DNA-binding transcription factor activity
VEJY3_04660	COG1346	cytolysis
VEJY3_04670	COG3923	Primosomal replication protein n
VEJY3_04675	COG0730	response to heat
VEJY3_04680	COG1199	ATP-dependent helicase activity
VEJY3_04690	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
VEJY3_04695	COG1187	pseudouridine synthase activity
VEJY3_04705	COG1278	Cold shock
VEJY3_04710	COG2127	Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation
VEJY3_04715	COG0542	response to heat
VEJY3_04720	COG0361	One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex
VEJY3_04725	COG2935	proteasome-mediated ubiquitin-dependent protein catabolic process
VEJY3_04730	COG2360	Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
VEJY3_04740	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
VEJY3_04750	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
VEJY3_04755	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
VEJY3_04760	COG0297	glycogen (starch) synthase activity
VEJY3_04780	COG3070	regulator of competence-specific genes
VEJY3_04785	COG1609	Transcriptional regulator
VEJY3_04790	COG3381	protein complex oligomerization
VEJY3_04795	COG0745	RESPONSE REGULATOR receiver
VEJY3_04800	COG1434	Gram-negative-bacterium-type cell wall biogenesis
VEJY3_04805	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
VEJY3_04810	COG3006	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid partitioning. Probably acts via its interaction with MukB and MukE. Overexpression results in anucleate cells. It has a calcium binding activity
VEJY3_04815	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
VEJY3_04820	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
VEJY3_04855	COG4067	protein conserved in archaea
VEJY3_04855	COG0189	ligase activity
VEJY3_04860	COG0500	methyltransferase
VEJY3_04865	COG4106	trans-aconitate 2-methyltransferase activity
VEJY3_04870	COG1801	Protein of unknown function DUF72
VEJY3_04880	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
VEJY3_04885	COG0632	four-way junction helicase activity
VEJY3_04890	COG2255	four-way junction helicase activity
VEJY3_04895	COG1271	oxidase subunit
VEJY3_04900	COG1294	oxidase, subunit
VEJY3_04905	COG4890	Cyd operon protein YbgT
VEJY3_04915	COG0824	Thioesterase
VEJY3_04920	COG0811	peptide transport
VEJY3_04935	COG0823	Involved in the tonB-independent uptake of proteins
VEJY3_04940	COG2885	chlorophyll binding
VEJY3_04945	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
VEJY3_04950	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
VEJY3_04960	COG3766	membrane
VEJY3_04970	COG0754	glutathionylspermidine amidase activity
VEJY3_04985	COG1858	cytochrome C peroxidase
VEJY3_05005	COG0784	Response regulator, receiver
VEJY3_05005	COG5002	protein histidine kinase activity
VEJY3_05015	COG0582	viral genome integration into host DNA
VEJY3_05150	COG0582	viral genome integration into host DNA
VEJY3_05185	COG0556	nucleotide-excision repair
VEJY3_05195	COG0419	ATPase involved in DNA repair
VEJY3_05250	COG1288	antiporter activity
VEJY3_05255	COG2988	succinylglutamate desuccinylase activity
VEJY3_05330	COG3052	prosthetic group binding
VEJY3_05345	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
VEJY3_05355	COG1396	sequence-specific DNA binding
VEJY3_05360	COG3135	benzoate transporter
VEJY3_05365	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
VEJY3_05370	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
VEJY3_05405	COG0686	Belongs to the AlaDH PNT family
VEJY3_05415	COG1674	ftsk spoiiie
VEJY3_05420	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
VEJY3_05425	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
VEJY3_05435	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
VEJY3_05440	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
VEJY3_05445	COG0156	8-amino-7-oxononanoate synthase activity
VEJY3_05455	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
VEJY3_05465	COG0501	Belongs to the peptidase M48B family
VEJY3_05475	COG4221	oxidoreductase activity
VEJY3_05490	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
VEJY3_05510	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
VEJY3_05520	COG0482	sulfurtransferase activity
VEJY3_05530	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
VEJY3_05540	COG1757	Na H antiporter
VEJY3_05555	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
VEJY3_05560	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
VEJY3_05565	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
VEJY3_05570	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
VEJY3_05570	COG0131	Imidazoleglycerol-phosphate dehydratase
VEJY3_05575	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
VEJY3_05580	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
VEJY3_05585	COG0107	imidazoleglycerol-phosphate synthase activity
VEJY3_05590	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
VEJY3_05590	COG0140	phosphoribosyl-ATP diphosphatase activity
VEJY3_05595	COG3012	SEC-C Motif Domain Protein
VEJY3_05600	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
VEJY3_05605	COG2908	Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
VEJY3_05610	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
VEJY3_05615	COG0215	cysteine-tRNA ligase activity
VEJY3_05620	COG1435	thymidine kinase activity
VEJY3_05625	COG1434	Gram-negative-bacterium-type cell wall biogenesis
VEJY3_05640	COG2116	formate transmembrane transporter activity
VEJY3_05650	COG0390	transport system, permease component
VEJY3_05655	COG4459	periplasmic nitrate reductase
VEJY3_05660	COG3005	denitrification pathway
VEJY3_05665	COG0243	molybdopterin cofactor binding
VEJY3_05680	COG1227	inorganic diphosphatase activity
VEJY3_05690	COG4172	Belongs to the ABC transporter superfamily
VEJY3_05700	COG4171	peptide transport system, permease
VEJY3_05705	COG4168	peptide transport system, permease
VEJY3_05715	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
VEJY3_05720	COG1842	Phage shock protein A
VEJY3_05730	COG1983	PspC domain protein
VEJY3_05750	COG2818	Glycosylase
VEJY3_05755	COG0626	cystathionine gamma-synthase activity
VEJY3_05765	COG0733	neurotransmitter:sodium symporter activity
VEJY3_05770	COG0564	pseudouridine synthase activity
VEJY3_05780	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
VEJY3_05785	COG1151	hydroxylamine reductase activity
VEJY3_05790	COG3604	Transcriptional regulator
VEJY3_05800	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
VEJY3_05805	COG4136	ATPase activity
VEJY3_05810	COG4135	transport system, permease component
VEJY3_05815	COG4134	Bacterial extracellular solute-binding protein
VEJY3_05825	COG3313	Fe-S protein
VEJY3_05840	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
VEJY3_05845	COG2205	protein histidine kinase activity
VEJY3_05850	COG0745	RESPONSE REGULATOR receiver
VEJY3_05860	COG1061	Type III restriction enzyme res subunit
VEJY3_05865	COG1187	pseudouridine synthase activity
VEJY3_05875	COG2814	Major facilitator Superfamily
VEJY3_05905	COG3005	denitrification pathway
VEJY3_05910	COG0702	epimerase
VEJY3_05915	COG0534	Mate efflux family protein
VEJY3_05920	COG1136	(ABC) transporter
VEJY3_05935	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
VEJY3_05945	COG1960	acyl-CoA dehydrogenase activity
VEJY3_05950	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
VEJY3_05955	COG3273	potassium ion transport
VEJY3_05955	COG2985	domain, Protein
VEJY3_05960	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
VEJY3_05965	COG1012	belongs to the aldehyde dehydrogenase family
VEJY3_05965	COG1454	alcohol dehydrogenase
VEJY3_05970	COG1737	Transcriptional regulator
VEJY3_05975	COG0076	glutamate decarboxylase activity
VEJY3_05985	COG2431	L-lysine efflux transmembrane transporter activity
VEJY3_05995	COG3070	regulator of competence-specific genes
VEJY3_06010	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
VEJY3_06010	COG4191	Histidine kinase
VEJY3_06020	COG1932	Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine
VEJY3_06030	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
VEJY3_06035	COG4988	ABC transporter
VEJY3_06040	COG0492	ferredoxin-NADP+ reductase activity
VEJY3_06060	COG0471	metal ion transport
VEJY3_06065	COG2949	membrane
VEJY3_06070	COG0281	malic enzyme
VEJY3_06075	COG1643	Atp-dependent helicase
VEJY3_06090	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
VEJY3_06125	COG0247	lactate metabolic process
VEJY3_06125	COG0277	FAD linked oxidase domain protein
VEJY3_06130	COG2020	methyltransferase activity
VEJY3_06135	COG0583	DNA-binding transcription factor activity
VEJY3_06140	COG3384	dioxygenase
VEJY3_06145	COG0435	Glutathione S-transferase
VEJY3_06155	COG0010	Belongs to the arginase family
VEJY3_06160	COG1228	amidohydrolase
VEJY3_06180	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
VEJY3_06190	COG0291	Belongs to the bacterial ribosomal protein bL35 family
VEJY3_06205	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
VEJY3_06210	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
VEJY3_06210	COG0072	phenylalanine-tRNA ligase activity
VEJY3_06215	COG1621	beta-fructofuranosidase activity
VEJY3_06220	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
VEJY3_06240	COG0776	regulation of translation
VEJY3_06250	COG0500	methyltransferase
VEJY3_06255	COG0027	Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate
VEJY3_06260	COG0295	cytidine deaminase activity
VEJY3_06265	COG1346	cytolysis
VEJY3_06270	COG1380	Effector of murein hydrolase LrgA
VEJY3_06275	COG2925	Exonuclease
VEJY3_06295	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
VEJY3_06310	COG2226	methyltransferase
VEJY3_06330	COG0702	epimerase
VEJY3_06335	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
VEJY3_06345	COG0368	Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate
VEJY3_06365	COG2988	succinylglutamate desuccinylase activity
VEJY3_06370	COG4139	cobalamin transport
VEJY3_06395	COG0583	DNA-binding transcription factor activity
VEJY3_06405	COG1451	nucleotide metabolic process
VEJY3_06465	COG4559	Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system
VEJY3_06470	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
VEJY3_06485	COG2195	Cleaves the N-terminal amino acid of tripeptides
VEJY3_06495	COG3508	Involved in the catabolism of homogentisate (2,5- dihydroxyphenylacetate or 2,5-OH-PhAc), a central intermediate in the degradation of phenylalanine and tyrosine. Catalyzes the oxidative ring cleavage of the aromatic ring of homogentisate to yield maleylacetoacetate
VEJY3_06505	COG0625	glutathione transferase activity
VEJY3_06520	COG4145	pantothenate transmembrane transporter activity
VEJY3_06525	COG3924	membrane
VEJY3_06545	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
VEJY3_06555	COG1349	DNA-binding transcription factor activity
VEJY3_06570	COG4785	May be involved in cell division
VEJY3_06580	COG0579	oxidoreductase
VEJY3_06610	COG4638	Rieske (2fe-2S)
VEJY3_06615	COG0583	DNA-binding transcription factor activity
VEJY3_06620	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
VEJY3_06740	COG1953	Uracil, thiamine, allantoin
VEJY3_06755	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
VEJY3_06770	COG2059	Chromate
VEJY3_06775	COG2059	Chromate
VEJY3_06815	COG1414	Transcriptional regulator
VEJY3_06825	COG0400	carboxylic ester hydrolase activity
VEJY3_06835	COG2198	Histidine kinase
VEJY3_06835	COG5002	protein histidine kinase activity
VEJY3_06835	COG0784	Response regulator, receiver
VEJY3_06845	COG0559	Belongs to the binding-protein-dependent transport system permease family
VEJY3_06865	COG0829	nickel cation binding
VEJY3_06870	COG0831	urea catabolic process
VEJY3_06875	COG0832	Belongs to the urease beta subunit family
VEJY3_06880	COG0804	urea catabolic process
VEJY3_06890	COG0830	nickel cation binding
VEJY3_06895	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
VEJY3_06905	COG0471	metal ion transport
VEJY3_06910	COG4191	Histidine kinase
VEJY3_06910	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
VEJY3_06930	COG0814	amino acid
VEJY3_06950	COG1132	(ABC) transporter
VEJY3_06955	COG1132	(ABC) transporter
VEJY3_06965	COG0473	3-isopropylmalate dehydrogenase activity
VEJY3_06970	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
VEJY3_06975	COG1012	belongs to the aldehyde dehydrogenase family
VEJY3_07000	COG0443	Heat shock 70 kDa protein
VEJY3_07040	COG1182	Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity
VEJY3_07045	COG1643	Atp-dependent helicase
VEJY3_07060	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
VEJY3_07070	COG1793	dna ligase
VEJY3_07080	COG0534	Mate efflux family protein
VEJY3_07085	COG0307	riboflavin synthase, alpha
VEJY3_07100	COG2201	protein-glutamate methylesterase activity
VEJY3_07105	COG3706	GGDEF domain
VEJY3_07115	COG0791	NLP P60 protein
VEJY3_07120	COG0840	transmembrane signaling receptor activity
VEJY3_07140	COG1940	carbohydrate kinase activity
VEJY3_07155	COG0303	'Molybdopterin
VEJY3_07165	COG3842	ATPase activity
VEJY3_07180	COG2204	response regulator
VEJY3_07185	COG4191	Histidine kinase
VEJY3_07190	COG0488	(ABC) transporter
VEJY3_07200	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
VEJY3_07230	COG0243	molybdopterin cofactor binding
VEJY3_07230	COG3383	formate dehydrogenase (NAD+) activity
VEJY3_07235	COG0437	4 iron, 4 sulfur cluster binding
VEJY3_07250	COG0110	maltose O-acetyltransferase activity
VEJY3_07265	COG0534	Mate efflux family protein
VEJY3_07270	COG0004	ammonium transporteR
VEJY3_07280	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
VEJY3_07285	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
VEJY3_07290	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
VEJY3_07295	COG1177	transmembrane transport
VEJY3_07300	COG1176	ABC-type spermidine putrescine transport system, permease component I
VEJY3_07305	COG3842	ATPase activity
VEJY3_07320	COG0037	tRNA processing
VEJY3_07325	COG0589	response to stress
VEJY3_07330	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
VEJY3_07345	COG2217	Heavy metal translocating P-type atpase
VEJY3_07355	COG2010	Cytochrome c
VEJY3_07370	COG3278	Belongs to the heme-copper respiratory oxidase family
VEJY3_07550	COG3120	sequence-specific DNA binding
VEJY3_07555	COG1067	ATP-dependent peptidase activity
VEJY3_07560	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
VEJY3_07585	COG0116	Belongs to the methyltransferase superfamily
VEJY3_07585	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
VEJY3_07595	COG0167	dihydroorotate dehydrogenase activity
VEJY3_07600	COG2902	Dehydrogenase
VEJY3_07610	COG0308	aminopeptidase N
VEJY3_07625	COG3109	RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities
VEJY3_07630	COG1956	GAF domain-containing protein
VEJY3_07635	COG1132	(ABC) transporter
VEJY3_07640	COG2995	paraquat-inducible protein a
VEJY3_07645	COG3008	intermembrane lipid transfer
VEJY3_07650	COG3270	Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA
VEJY3_07650	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
VEJY3_07670	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
VEJY3_07675	COG1666	GTP binding
VEJY3_07690	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
VEJY3_07695	COG4597	amino acid ABC transporter
VEJY3_07700	COG0765	amino acid transport
VEJY3_07705	COG1126	abc transporter atp-binding protein
VEJY3_07710	COG0670	Belongs to the BI1 family
VEJY3_07720	COG2920	part of a sulfur-relay system
VEJY3_07725	COG1254	Belongs to the acylphosphatase family
VEJY3_07730	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
VEJY3_07750	COG2885	chlorophyll binding
VEJY3_07760	COG3706	GGDEF domain
VEJY3_07770	COG0602	queuosine metabolic process
VEJY3_07775	COG0561	phosphatase activity
VEJY3_07785	COG0110	maltose O-acetyltransferase activity
VEJY3_07805	COG5001	Diguanylate cyclase
VEJY3_07825	COG1051	belongs to the nudix hydrolase family
VEJY3_07840	COG2828	Protein conserved in bacteria
VEJY3_07850	COG0372	Belongs to the citrate synthase family
VEJY3_07855	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
VEJY3_07885	COG0730	response to heat
VEJY3_07895	COG1012	belongs to the aldehyde dehydrogenase family
VEJY3_07900	COG3284	Transcriptional regulator
VEJY3_07915	COG0362	Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH
VEJY3_07920	COG0363	glucosamine-6-phosphate deaminase activity
VEJY3_07925	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
VEJY3_07935	COG4774	siderophore transport
VEJY3_07940	COG4565	transcriptional regulatory protein
VEJY3_07945	COG3290	protein histidine kinase activity
VEJY3_07960	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
VEJY3_07975	COG0527	aspartate kinase activity
VEJY3_07985	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
VEJY3_07990	COG0456	acetyltransferase
VEJY3_08000	COG4176	ABC-type proline glycine betaine transport system permease component
VEJY3_08005	COG2113	Glycine betaine
VEJY3_08025	COG4221	oxidoreductase activity
VEJY3_08035	COG0745	RESPONSE REGULATOR receiver
VEJY3_08040	COG0642	Histidine kinase
VEJY3_08045	COG1368	sulfuric ester hydrolase activity
VEJY3_08065	COG1404	Belongs to the peptidase S8 family
VEJY3_08120	COG0463	Glycosyl transferase, family 2
VEJY3_08150	COG1115	amino acid carrier protein
VEJY3_08165	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
VEJY3_08170	COG1280	lysine exporter protein (LysE YggA)
VEJY3_08175	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
VEJY3_08180	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
VEJY3_08200	COG1560	Kdo2-lipid A biosynthetic process
VEJY3_08210	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
VEJY3_08215	COG3063	Type IV pilus biogenesis stability protein PilW
VEJY3_08245	COG2315	Protein conserved in bacteria
VEJY3_08250	COG1846	Transcriptional regulator
VEJY3_08255	COG0697	spore germination
VEJY3_08260	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
VEJY3_08265	COG1012	belongs to the aldehyde dehydrogenase family
VEJY3_08270	COG2957	Belongs to the agmatine deiminase family
VEJY3_08280	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
VEJY3_08285	COG1012	belongs to the aldehyde dehydrogenase family
VEJY3_08290	COG1396	sequence-specific DNA binding
VEJY3_08290	COG1917	Cupin 2, conserved barrel domain protein
VEJY3_08295	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
VEJY3_08300	COG0174	glutamine synthetase
VEJY3_08305	COG1757	Na H antiporter
VEJY3_08325	COG2824	Alkylphosphonate utilization operon protein PhnA
VEJY3_08330	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
VEJY3_08360	COG0346	lactoylglutathione lyase activity
VEJY3_08390	COG1794	racemase activity, acting on amino acids and derivatives
VEJY3_08415	COG0724	RNA recognition motif
VEJY3_08450	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
VEJY3_08460	COG4656	Part of a membrane complex involved in electron transport
VEJY3_08465	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
VEJY3_08485	COG4820	ethanolamine utilization protein (EutJ)
VEJY3_08490	COG4869	propanediol catabolic process
VEJY3_08505	COG4577	Carbon dioxide concentrating mechanism carboxysome shell protein
VEJY3_08515	COG2207	Transcriptional regulator
VEJY3_08520	COG2972	Histidine kinase
VEJY3_08540	COG0745	RESPONSE REGULATOR receiver
VEJY3_08545	COG5000	phosphorelay sensor kinase activity
VEJY3_08545	COG5002	protein histidine kinase activity
VEJY3_08570	COG1454	alcohol dehydrogenase
VEJY3_08575	COG2610	gluconate transmembrane transporter activity
VEJY3_08585	COG3718	enzyme involved in inositol metabolism
VEJY3_08590	COG0673	inositol 2-dehydrogenase activity
VEJY3_08595	COG2814	Major facilitator Superfamily
VEJY3_08595	COG0477	Major facilitator Superfamily
VEJY3_08600	COG1082	Xylose isomerase domain protein TIM barrel
VEJY3_08610	COG1082	Xylose isomerase domain protein TIM barrel
VEJY3_08620	COG1012	belongs to the aldehyde dehydrogenase family
VEJY3_08620	COG1454	alcohol dehydrogenase
VEJY3_08625	COG3962	Belongs to the TPP enzyme family
VEJY3_08630	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
VEJY3_08645	COG2999	glutathione oxidoreductase activity
VEJY3_08670	COG0477	Major facilitator Superfamily
VEJY3_08670	COG2814	Major facilitator Superfamily
VEJY3_08675	COG0673	inositol 2-dehydrogenase activity
VEJY3_08680	COG1082	Xylose isomerase domain protein TIM barrel
VEJY3_08700	COG2885	chlorophyll binding
VEJY3_08700	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
VEJY3_08720	COG3437	response regulator, receiver
VEJY3_08720	COG2205	protein histidine kinase activity
VEJY3_08720	COG4999	Histidine kinase
VEJY3_08720	COG3850	Histidine kinase
VEJY3_08765	COG3206	protein involved in exopolysaccharide biosynthesis
VEJY3_08765	COG0489	protein tyrosine kinase activity
VEJY3_08770	COG0297	glycogen (starch) synthase activity
VEJY3_08780	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
VEJY3_08795	COG5492	domain, Protein
VEJY3_08925	COG0371	Dehydrogenase
VEJY3_08930	COG1609	Transcriptional regulator
VEJY3_08935	COG1105	Belongs to the carbohydrate kinase PfkB family
VEJY3_08940	COG0517	IMP dehydrogenase activity
VEJY3_08940	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
VEJY3_08945	COG4702	Belongs to the UPF0303 family
VEJY3_08950	COG0673	inositol 2-dehydrogenase activity
VEJY3_08955	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
VEJY3_08955	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
VEJY3_08955	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
VEJY3_08960	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
VEJY3_08965	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
VEJY3_08975	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
VEJY3_08985	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
VEJY3_08990	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
VEJY3_08995	COG2207	Transcriptional regulator
VEJY3_09020	COG2801	Transposase and inactivated derivatives
VEJY3_09035	COG0604	alcohol dehydrogenase
VEJY3_09040	COG1902	pentaerythritol trinitrate reductase activity
VEJY3_09045	COG1902	pentaerythritol trinitrate reductase activity
VEJY3_09060	COG0656	L-ascorbic acid biosynthetic process
VEJY3_09065	COG0583	DNA-binding transcription factor activity
VEJY3_09070	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
VEJY3_09075	COG0583	DNA-binding transcription factor activity
VEJY3_09080	COG2814	Major facilitator Superfamily
VEJY3_09090	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
VEJY3_09095	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
VEJY3_09105	COG2188	Transcriptional regulator
VEJY3_09110	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
VEJY3_09110	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
VEJY3_09110	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
VEJY3_09115	COG0383	alpha-mannosidase activity
VEJY3_09120	COG1929	Belongs to the glycerate kinase type-1 family
VEJY3_09130	COG1609	Transcriptional regulator
VEJY3_09140	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
VEJY3_09160	COG4580	involved in the transport of maltose and maltodextrins
VEJY3_09170	COG3250	beta-galactosidase activity
VEJY3_09185	COG2814	Major facilitator Superfamily
VEJY3_09215	COG3547	Transposase (IS116 IS110 IS902 family)
VEJY3_09230	COG3344	reverse transcriptase
VEJY3_09240	COG1012	belongs to the aldehyde dehydrogenase family
VEJY3_09245	COG2186	Transcriptional regulator
VEJY3_09260	COG1175	transmembrane transport
VEJY3_09285	COG2801	Transposase and inactivated derivatives
VEJY3_09290	COG2963	transposase activity
VEJY3_09300	COG0148	phosphopyruvate hydratase activity
VEJY3_09320	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
VEJY3_09330	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
VEJY3_09345	COG0534	Mate efflux family protein
VEJY3_09350	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
VEJY3_09365	COG0346	lactoylglutathione lyase activity
VEJY3_09370	COG4948	Mandelate Racemase Muconate Lactonizing
VEJY3_09375	COG0800	Aldolase
VEJY3_09385	COG0246	Mannitol dehydrogenase
VEJY3_09390	COG1063	alcohol dehydrogenase
VEJY3_09395	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
VEJY3_09400	COG0840	transmembrane signaling receptor activity
VEJY3_09405	COG2801	Transposase and inactivated derivatives
VEJY3_09410	COG2801	Transposase and inactivated derivatives
VEJY3_09415	COG2731	YhcH YjgK YiaL family protein
VEJY3_09420	COG2186	Transcriptional regulator
VEJY3_09450	COG1609	Transcriptional regulator
VEJY3_09455	COG2017	converts alpha-aldose to the beta-anomer
VEJY3_09475	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
VEJY3_09485	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
VEJY3_09530	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
VEJY3_09540	COG1609	Transcriptional regulator
VEJY3_09770	COG4220	transposase activity
VEJY3_09825	COG1403	HNH endonuclease
VEJY3_09850	COG1802	Transcriptional regulator
VEJY3_09850	COG4626	Terminase
VEJY3_09880	COG5532	Uncharacterized conserved protein (DUF2303)
VEJY3_09920	COG0582	viral genome integration into host DNA
VEJY3_09940	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
VEJY3_09950	COG3768	UPF0283 membrane protein
VEJY3_09955	COG3106	COG3106 Predicted ATPase
VEJY3_09970	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
VEJY3_09980	COG0814	amino acid
VEJY3_09985	COG1760	l-serine dehydratase
VEJY3_09990	COG0720	synthase
VEJY3_09995	COG0017	Asparaginyl-tRNA synthetase
VEJY3_10005	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
VEJY3_10015	COG1448	Aminotransferase
VEJY3_10030	COG2176	DNA-directed DNA polymerase activity
VEJY3_10035	COG0840	transmembrane signaling receptor activity
VEJY3_10040	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
VEJY3_10045	COG1846	Transcriptional regulator
VEJY3_10070	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
VEJY3_10085	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
VEJY3_10090	COG3108	Peptidase M15
VEJY3_10095	COG2989	Protein conserved in bacteria
VEJY3_10120	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
VEJY3_10130	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
VEJY3_10135	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
VEJY3_10140	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
VEJY3_10150	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
VEJY3_10180	COG0019	diaminopimelate decarboxylase activity
VEJY3_10200	COG0322	excinuclease ABC activity
VEJY3_10205	COG2197	response regulator
VEJY3_10210	COG0417	DNA replication proofreading
VEJY3_10220	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
VEJY3_10225	COG3099	Belongs to the UPF0263 family
VEJY3_10230	COG1187	pseudouridine synthase activity
VEJY3_10240	COG0009	L-threonylcarbamoyladenylate synthase
VEJY3_10245	COG0613	PHP domain protein
VEJY3_10255	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
VEJY3_10260	COG0512	Glutamine amidotransferase of anthranilate synthase
VEJY3_10265	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
VEJY3_10270	COG0134	indole-3-glycerol-phosphate synthase activity
VEJY3_10270	COG0135	phosphoribosylanthranilate isomerase activity
VEJY3_10275	COG0133	tryptophan synthase activity
VEJY3_10280	COG0159	tryptophan synthase activity
VEJY3_10285	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
VEJY3_10290	COG0318	PFAM AMP-dependent synthetase and ligase
VEJY3_10295	COG1301	dicarboxylic acid transport
VEJY3_10320	COG1607	acyl-coa hydrolase
VEJY3_10325	COG2350	Protein conserved in bacteria
VEJY3_10335	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
VEJY3_10340	COG0583	DNA-binding transcription factor activity
VEJY3_10355	COG5001	Diguanylate cyclase
VEJY3_10360	COG1032	radical SAM domain protein
VEJY3_10365	COG0745	RESPONSE REGULATOR receiver
VEJY3_10370	COG3850	Histidine kinase
VEJY3_10370	COG5002	protein histidine kinase activity
VEJY3_10405	COG3118	belongs to the thioredoxin family
VEJY3_10410	COG4232	protein-disulfide reductase activity
VEJY3_10420	COG0189	ligase activity
VEJY3_10425	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
VEJY3_10430	COG0745	RESPONSE REGULATOR receiver
VEJY3_10430	COG3706	GGDEF domain
VEJY3_10435	COG2308	Evidence 4 Homologs of previously reported genes of
VEJY3_10450	COG2307	Protein conserved in bacteria
VEJY3_10450	COG2308	Evidence 4 Homologs of previously reported genes of
VEJY3_10485	COG2863	cytochrome
VEJY3_10490	COG3258	Cytochrome c
VEJY3_10495	COG2995	paraquat-inducible protein a
VEJY3_10500	COG3008	intermembrane lipid transfer
VEJY3_10500	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
VEJY3_10505	COG3009	Protein conserved in bacteria
VEJY3_10510	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
VEJY3_10535	COG4166	transmembrane transport
VEJY3_10545	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
VEJY3_10550	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
VEJY3_10560	COG0539	negative regulation of cytoplasmic translation
VEJY3_10565	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
VEJY3_10570	COG0616	signal peptide processing
VEJY3_10575	COG1028	Short-chain dehydrogenase reductase Sdr
VEJY3_10590	COG0587	DNA-directed DNA polymerase activity
VEJY3_10595	COG1940	carbohydrate kinase activity
VEJY3_10600	COG0469	pyruvate kinase activity
VEJY3_10605	COG4667	esterase of the alpha-beta hydrolase superfamily
VEJY3_10620	COG0733	neurotransmitter:sodium symporter activity
VEJY3_10635	COG1263	PTS System
VEJY3_10635	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
VEJY3_10645	COG1263	PTS System
VEJY3_10645	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
VEJY3_10645	COG2190	(PTS) system
VEJY3_10650	COG0084	hydrolase, TatD family'
VEJY3_10655	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
VEJY3_10660	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
VEJY3_10665	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
VEJY3_10695	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
VEJY3_10700	COG0416	fatty acid biosynthetic process
VEJY3_10710	COG1399	metal-binding, possibly nucleic acid-binding protein
VEJY3_10715	COG0424	maF-like protein
VEJY3_10720	COG0564	pseudouridine synthase activity
VEJY3_10725	COG1530	ribonuclease E activity
VEJY3_10730	COG0659	secondary active sulfate transmembrane transporter activity
VEJY3_10735	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
VEJY3_10740	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
VEJY3_10750	COG0572	uridine kinase
VEJY3_10755	COG0489	protein tyrosine kinase activity
VEJY3_10760	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
VEJY3_10760	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
VEJY3_10770	COG2186	Transcriptional regulator
VEJY3_10775	COG3067	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
VEJY3_10780	COG1495	Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein
VEJY3_10785	COG0653	protein targeting
VEJY3_10790	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
VEJY3_10795	COG2199	diguanylate cyclase activity
VEJY3_10795	COG2203	Gaf domain
VEJY3_10800	COG0366	Alpha amylase catalytic
VEJY3_10805	COG1122	ATPase activity
VEJY3_10810	COG4120	Belongs to the binding-protein-dependent transport system permease family
VEJY3_10820	COG3092	negative regulation of chromosome organization
VEJY3_10825	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
VEJY3_10830	COG0280	phosphate acetyltransferase
VEJY3_10830	COG0857	belongs to the CobB CobQ family
VEJY3_10835	COG3174	membrane
VEJY3_10840	COG0435	Glutathione S-transferase
VEJY3_10850	COG0444	Belongs to the ABC transporter superfamily
VEJY3_10855	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
VEJY3_10860	COG0601	transmembrane transport
VEJY3_10870	COG0314	molybdopterin synthase activity
VEJY3_10875	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
VEJY3_10880	COG0315	cyclic pyranopterin monophosphate synthase activity
VEJY3_10885	COG0521	Mo-molybdopterin cofactor biosynthetic process
VEJY3_10890	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
VEJY3_10895	COG0391	Required for morphogenesis under gluconeogenic growth conditions
VEJY3_10900	COG2198	Histidine kinase
VEJY3_10905	COG2204	response regulator
VEJY3_10910	COG0556	nucleotide-excision repair
VEJY3_10915	COG4657	Part of a membrane complex involved in electron transport
VEJY3_10920	COG2878	Part of a membrane complex involved in electron transport
VEJY3_10925	COG4656	Part of a membrane complex involved in electron transport
VEJY3_10930	COG4658	electron transport chain
VEJY3_10935	COG4659	FMN binding
VEJY3_10940	COG4660	Part of a membrane complex involved in electron transport
VEJY3_10945	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
VEJY3_10950	COG0346	lactoylglutathione lyase activity
VEJY3_10960	COG2885	chlorophyll binding
VEJY3_10965	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
VEJY3_10970	COG2056	Na+-H+ antiporter family
VEJY3_10980	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
VEJY3_10995	COG1028	Short-chain dehydrogenase reductase Sdr
VEJY3_11000	COG1012	belongs to the aldehyde dehydrogenase family
VEJY3_11000	COG1454	alcohol dehydrogenase
VEJY3_11010	COG2095	MarC family integral membrane protein
VEJY3_11015	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
VEJY3_11020	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
VEJY3_11025	COG1757	Na H antiporter
VEJY3_11040	COG3081	Nucleoid-associated protein
VEJY3_11045	COG3082	Protein of unknown function (DUF1414)
VEJY3_11055	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
VEJY3_11065	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
VEJY3_11070	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
VEJY3_11075	COG1120	ATPase activity
VEJY3_11080	COG1522	sequence-specific DNA binding
VEJY3_11085	COG0626	cystathionine gamma-synthase activity
VEJY3_11090	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
VEJY3_11095	COG0765	amino acid transport
VEJY3_11105	COG0123	including yeast histone deacetylase and acetoin utilization protein
VEJY3_11115	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
VEJY3_11120	COG0778	Nitroreductase
VEJY3_11125	COG0446	pyridine nucleotide-disulphide oxidoreductase
VEJY3_11125	COG1902	pentaerythritol trinitrate reductase activity
VEJY3_11130	COG0616	signal peptide processing
VEJY3_11135	COG0252	asparaginase activity
VEJY3_11140	COG3139	Protein of unknown function (DUF1315)
VEJY3_11150	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
VEJY3_11155	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
VEJY3_11165	COG2226	methyltransferase
VEJY3_11180	COG1785	Belongs to the alkaline phosphatase family
VEJY3_11185	COG0668	transmembrane transport
VEJY3_11195	COG2261	transglycosylase associated protein
VEJY3_11205	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
VEJY3_11210	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
VEJY3_11215	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
VEJY3_11225	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
VEJY3_11240	COG0745	RESPONSE REGULATOR receiver
VEJY3_11245	COG0583	DNA-binding transcription factor activity
VEJY3_11250	COG5492	domain, Protein
VEJY3_11255	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
VEJY3_11260	COG1286	toxin biosynthetic process
VEJY3_11265	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
VEJY3_11270	COG0285	dihydrofolate synthase activity
VEJY3_11275	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
VEJY3_11280	COG0101	tRNA pseudouridine synthase activity
VEJY3_11290	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
VEJY3_11295	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
VEJY3_11300	COG0747	negative chemotaxis
VEJY3_11305	COG1349	DNA-binding transcription factor activity
VEJY3_11315	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
VEJY3_11325	COG0431	NADPH-dependent FMN reductase
VEJY3_11335	COG3101	peptidyl-lysine hydroxylation
VEJY3_11340	COG2860	membrane
VEJY3_11345	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
VEJY3_11350	COG2890	protein-(glutamine-N5) methyltransferase activity
VEJY3_11355	COG2840	Smr protein MutS2
VEJY3_11360	COG2062	phosphohistidine phosphatase, SixA
VEJY3_11375	COG1250	3-hydroxyacyl-CoA dehydrogenase
VEJY3_11375	COG1024	Enoyl-CoA hydratase
VEJY3_11380	COG0183	Belongs to the thiolase family
VEJY3_11400	COG2067	long-chain fatty acid transport protein
VEJY3_11420	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
VEJY3_11425	COG1138	Cytochrome C-type biogenesis protein
VEJY3_11430	COG2332	Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH
VEJY3_11435	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
VEJY3_11440	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
VEJY3_11445	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
VEJY3_11450	COG4133	protoheme IX ABC transporter activity
VEJY3_11460	COG0835	chemotaxis
VEJY3_11470	COG1192	Involved in chromosome partitioning
VEJY3_11475	COG2201	protein-glutamate methylesterase activity
VEJY3_11480	COG2198	Histidine kinase
VEJY3_11480	COG0643	Histidine kinase
VEJY3_11485	COG3143	Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P)
VEJY3_11500	COG0455	bacterial-type flagellum organization
VEJY3_11525	COG1987	bacterial-type flagellum assembly
VEJY3_11575	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
VEJY3_11585	COG1677	Flagellar hook-basal body complex protein FliE
VEJY3_11590	COG2204	response regulator
VEJY3_11595	COG4191	Histidine kinase
VEJY3_11610	COG1516	flagellar protein fliS
VEJY3_11620	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
VEJY3_11625	COG1334	flagellar protein FlaG
VEJY3_11630	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
VEJY3_11635	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
VEJY3_11640	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
VEJY3_11645	COG2837	iron assimilation
VEJY3_11670	COG1393	Belongs to the ArsC family
VEJY3_11675	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
VEJY3_11690	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
VEJY3_11695	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
VEJY3_11700	COG2716	regulation of RNA biosynthetic process
VEJY3_11705	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
VEJY3_11735	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
VEJY3_11755	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
VEJY3_11785	COG0732	type I restriction modification DNA specificity domain
VEJY3_11790	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
VEJY3_11825	COG2197	response regulator
VEJY3_11860	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
VEJY3_11875	COG4783	chaperone-mediated protein folding
VEJY3_11880	COG1393	Belongs to the ArsC family
VEJY3_11900	COG2233	PERMEase
VEJY3_11905	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
VEJY3_11910	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
VEJY3_11915	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
VEJY3_11920	COG0121	glutamine amidotransferase
VEJY3_11925	COG0279	D-glycero-D-manno-heptose 7-phosphate biosynthetic process
VEJY3_11930	COG1960	acyl-CoA dehydrogenase activity
VEJY3_11945	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
VEJY3_11950	COG0328	RNA-DNA hybrid ribonuclease activity
VEJY3_11955	COG2226	methyltransferase
VEJY3_11960	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
VEJY3_11965	COG1388	LysM domain
VEJY3_11965	COG0741	lytic transglycosylase activity
VEJY3_11975	COG3021	interspecies interaction between organisms
VEJY3_11980	COG0347	Belongs to the P(II) protein family
VEJY3_11990	COG0037	tRNA processing
VEJY3_11995	COG0825	malonyl-CoA metabolic process
VEJY3_12000	COG0587	DNA-directed DNA polymerase activity
VEJY3_12010	COG0763	Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
VEJY3_12015	COG1043	involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
VEJY3_12025	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
VEJY3_12030	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
VEJY3_12040	COG0750	zinc metalloprotease
VEJY3_12045	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
VEJY3_12050	COG0575	Belongs to the CDS family
VEJY3_12055	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
VEJY3_12060	COG0233	cytoplasmic translational termination
VEJY3_12065	COG0528	UMP kinase activity
VEJY3_12070	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
VEJY3_12075	COG0052	Belongs to the universal ribosomal protein uS2 family
VEJY3_12080	COG0024	Methionine aminopeptidase
VEJY3_12085	COG2844	Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen
VEJY3_12095	COG0564	pseudouridine synthase activity
VEJY3_12130	COG1671	Belongs to the UPF0178 family
VEJY3_12135	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
VEJY3_12145	COG0254	rRNA binding
VEJY3_12150	COG1720	tRNA m6t6A37 methyltransferase activity
VEJY3_12170	COG0733	neurotransmitter:sodium symporter activity
VEJY3_12180	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
VEJY3_12185	COG0514	ATP-dependent DNA helicase (RecQ)
VEJY3_12190	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
VEJY3_12200	COG2991	Protein conserved in bacteria
VEJY3_12205	COG1477	protein flavinylation
VEJY3_12210	COG2871	sodium ion transport
VEJY3_12215	COG2209	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
VEJY3_12220	COG1347	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
VEJY3_12230	COG1805	sodium ion transport
VEJY3_12235	COG1726	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
VEJY3_12240	COG0271	Belongs to the BolA IbaG family
VEJY3_12245	COG2813	Specifically methylates the guanine in position
VEJY3_12270	COG1595	DNA-templated transcription, initiation
VEJY3_12290	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
VEJY3_12295	COG0693	protein deglycase activity
VEJY3_12300	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
VEJY3_12305	COG3706	GGDEF domain
VEJY3_12310	COG2166	iron-sulfur cluster assembly
VEJY3_12315	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
VEJY3_12320	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
VEJY3_12330	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
VEJY3_12330	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
VEJY3_12335	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
VEJY3_12340	COG1074	ATP-dependent DNA helicase activity
VEJY3_12345	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
VEJY3_12365	COG3141	response to X-ray
VEJY3_12375	COG2171	N-acyltransferase activity
VEJY3_12380	COG0584	glycerophosphoryl diester phosphodiesterase
VEJY3_12385	COG2271	Major facilitator Superfamily
VEJY3_12390	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
VEJY3_12395	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
VEJY3_12400	COG1349	DNA-binding transcription factor activity
VEJY3_12405	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
VEJY3_12430	COG1609	Transcriptional regulator
VEJY3_12435	COG1609	Transcriptional regulator
VEJY3_12440	COG0583	DNA-binding transcription factor activity
VEJY3_12510	COG4964	Belongs to the GSP D family
VEJY3_12540	COG2169	Transcriptional regulator
VEJY3_12545	COG1022	Amp-dependent synthetase and ligase
VEJY3_12555	COG0583	DNA-binding transcription factor activity
VEJY3_12560	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
VEJY3_12565	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
VEJY3_12575	COG0560	Phosphoserine phosphatase
VEJY3_12585	COG0813	purine-nucleoside phosphorylase activity
VEJY3_12590	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
VEJY3_12595	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
VEJY3_12600	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
VEJY3_12605	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
VEJY3_12610	COG0084	hydrolase, TatD family'
VEJY3_12620	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
VEJY3_12635	COG3153	acetyltransferase
VEJY3_12660	COG0534	Mate efflux family protein
VEJY3_12665	COG4785	May be involved in cell division
VEJY3_12670	COG1185	polyribonucleotide nucleotidyltransferase activity
VEJY3_12675	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
VEJY3_12680	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
VEJY3_12685	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
VEJY3_12690	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
VEJY3_12695	COG0195	Participates in both transcription termination and antitermination
VEJY3_12700	COG0779	Required for maturation of 30S ribosomal subunits
VEJY3_12705	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
VEJY3_12720	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
VEJY3_12725	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
VEJY3_12730	COG0293	Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit
VEJY3_12735	COG1534	Rna-binding protein
VEJY3_12740	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
VEJY3_12745	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
VEJY3_12750	COG2027	D-alanyl-D-alanine carboxypeptidase
VEJY3_12765	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
VEJY3_12770	COG0739	heme binding
VEJY3_12780	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
VEJY3_12785	COG0316	Belongs to the HesB IscA family
VEJY3_12790	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
VEJY3_12800	COG0628	permease
VEJY3_12805	COG2813	Specifically methylates the guanine in position
VEJY3_12815	COG0747	negative chemotaxis
VEJY3_12825	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
VEJY3_12830	COG0444	Belongs to the ABC transporter superfamily
VEJY3_12835	COG4608	Belongs to the ABC transporter superfamily
VEJY3_12845	COG2971	BadF BadG BcrA BcrD
VEJY3_12860	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
VEJY3_12865	COG3842	ATPase activity
VEJY3_12875	COG1840	ABC-type Fe3 transport system, periplasmic component
VEJY3_12880	COG0004	ammonium transporteR
VEJY3_12895	COG3835	regulator
VEJY3_12900	COG2610	gluconate transmembrane transporter activity
VEJY3_12905	COG1929	Belongs to the glycerate kinase type-1 family
VEJY3_12910	COG1049	propionate catabolic process, 2-methylcitrate cycle
VEJY3_12915	COG1752	Esterase of the alpha-beta hydrolase superfamily
VEJY3_12920	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
VEJY3_12925	COG1643	Atp-dependent helicase
VEJY3_12930	COG1489	DNA binding
VEJY3_12935	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
VEJY3_12940	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
VEJY3_12950	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
VEJY3_12955	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
VEJY3_12960	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
VEJY3_12965	COG0842	Transport permease protein
VEJY3_12970	COG1131	(ABC) transporter
VEJY3_12975	COG0659	secondary active sulfate transmembrane transporter activity
VEJY3_12980	COG0288	reversible hydration of carbon dioxide
VEJY3_12995	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
VEJY3_13000	COG0508	dehydrogenase complex catalyzes the overall conversion of
VEJY3_13005	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
VEJY3_13010	COG2186	Transcriptional regulator
VEJY3_13020	COG0157	Belongs to the NadC ModD family
VEJY3_13025	COG4969	Belongs to the N-Me-Phe pilin family
VEJY3_13030	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
VEJY3_13035	COG1459	type II secretion system
VEJY3_13045	COG0237	dephospho-CoA kinase activity
VEJY3_13050	COG4582	Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity
VEJY3_13055	COG3024	Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C-terminal domain of GyrB, which probably disrupts DNA binding by the gyrase
VEJY3_13070	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
VEJY3_13075	COG0228	four-way junction DNA binding
VEJY3_13080	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
VEJY3_13085	COG4137	Cytochrome C assembly protein
VEJY3_13090	COG4536	flavin adenine dinucleotide binding
VEJY3_13095	COG1854	S-ribosylhomocysteine lyase activity
VEJY3_13105	COG2918	glutathione biosynthetic process
VEJY3_13110	COG0612	Peptidase, M16
VEJY3_13115	COG1238	metal cluster binding
VEJY3_13125	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
VEJY3_13130	COG0511	ligase activity, forming carbon-carbon bonds
VEJY3_13130	COG5016	pyruvate
VEJY3_13145	COG0527	aspartate kinase activity
VEJY3_13150	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
VEJY3_13165	COG1546	Belongs to the CinA family
VEJY3_13170	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
VEJY3_13175	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
VEJY3_13185	COG2518	Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and or degradation of damaged proteins
VEJY3_13190	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
VEJY3_13205	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
VEJY3_13210	COG2919	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic
VEJY3_13215	COG0148	phosphopyruvate hydratase activity
VEJY3_13220	COG0504	CTP synthase activity
VEJY3_13225	COG3956	TIGRFAM MazG family protein
VEJY3_13230	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
VEJY3_13235	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
VEJY3_13245	COG0736	holo-[acyl-carrier-protein] synthase activity
VEJY3_13250	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
VEJY3_13255	COG1381	Involved in DNA repair and RecF pathway recombination
VEJY3_13260	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
VEJY3_13270	COG0681	Belongs to the peptidase S26 family
VEJY3_13275	COG0481	GTPase activity
VEJY3_13280	COG3086	response to oxidative stress
VEJY3_13295	COG1595	DNA-templated transcription, initiation
VEJY3_13300	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
VEJY3_13305	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
VEJY3_13310	COG0354	folic acid binding
VEJY3_13325	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
VEJY3_13330	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
VEJY3_13335	COG3079	Belongs to the UPF0149 family
VEJY3_13340	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
VEJY3_13345	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
VEJY3_13350	COG0120	Catalyzes the reversible conversion of ribose-5- phosphate to ribulose 5-phosphate
VEJY3_13355	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
VEJY3_13365	COG0583	DNA-binding transcription factor activity
VEJY3_13370	COG1279	arginine transmembrane transporter activity
VEJY3_13375	COG0668	transmembrane transport
VEJY3_13380	COG0191	fructose-bisphosphate aldolase activity
VEJY3_13385	COG0126	phosphoglycerate kinase activity
VEJY3_13390	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
VEJY3_13395	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
VEJY3_13405	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
VEJY3_13420	COG2356	endonuclease I
VEJY3_13425	COG1385	rRNA (uridine-N3-)-methyltransferase activity
VEJY3_13430	COG0189	ligase activity
VEJY3_13435	COG1678	Uncharacterized ACR, COG1678
VEJY3_13440	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
VEJY3_13455	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
VEJY3_13460	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
VEJY3_13465	COG0762	integral membrane protein
VEJY3_13480	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
VEJY3_13495	COG2066	Belongs to the glutaminase family
VEJY3_13515	COG2924	Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and or repair of Fe-S clusters in biosynthetic enzymes
VEJY3_13520	COG0741	lytic transglycosylase activity
VEJY3_13530	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
VEJY3_13535	COG0300	oxidoreductase activity
VEJY3_13545	COG1028	Short-chain dehydrogenase reductase Sdr
VEJY3_13550	COG4325	translation initiation factor activity
VEJY3_13560	COG0795	lipopolysaccharide-transporting ATPase activity
VEJY3_13565	COG0795	lipopolysaccharide-transporting ATPase activity
VEJY3_13570	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
VEJY3_13575	COG2927	DNA polymerase III (CHI subunit)
VEJY3_13580	COG0525	valine-tRNA ligase activity
VEJY3_13605	COG2235	arginine
VEJY3_13615	COG0540	Belongs to the ATCase OTCase family
VEJY3_13620	COG1781	'de novo' pyrimidine nucleobase biosynthetic process
VEJY3_13625	COG0251	oxidation-reduction process
VEJY3_13630	COG0204	Acyl-transferase
VEJY3_13635	COG0766	Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine
VEJY3_13640	COG5007	Belongs to the BolA IbaG family
VEJY3_13650	COG2854	intermembrane phospholipid transfer
VEJY3_13655	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
VEJY3_13660	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
VEJY3_13665	COG1127	ABC transporter
VEJY3_13675	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
VEJY3_13675	COG0517	IMP dehydrogenase activity
VEJY3_13685	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
VEJY3_13690	COG1137	ATPase activity
VEJY3_13700	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
VEJY3_13705	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
VEJY3_13710	COG1660	Displays ATPase and GTPase activities
VEJY3_13715	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
VEJY3_13720	COG2239	Acts as a magnesium transporter
VEJY3_13725	COG0312	modulator of DNA gyrase
VEJY3_13730	COG3028	Belongs to the UPF0307 family
VEJY3_13735	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
VEJY3_13740	COG0564	pseudouridine synthase activity
VEJY3_13750	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
VEJY3_13755	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
VEJY3_13760	COG0312	modulator of DNA gyrase
VEJY3_13765	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
VEJY3_13770	COG3164	Protein of unknown function
VEJY3_13775	COG1530	ribonuclease E activity
VEJY3_13780	COG0424	maF-like protein
VEJY3_13785	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
VEJY3_13790	COG1792	Involved in formation and maintenance of cell shape
VEJY3_13795	COG1077	Cell shape determining protein MreB Mrl
VEJY3_13845	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
VEJY3_13855	COG3267	Type II secretory pathway component ExeA
VEJY3_13855	COG3409	Peptidoglycan-binding domain 1 protein
VEJY3_13880	COG2199	diguanylate cyclase activity
VEJY3_13880	COG2200	EAL domain
VEJY3_13885	COG0629	single-stranded DNA binding
VEJY3_13900	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
VEJY3_13910	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
VEJY3_13915	COG0527	aspartate kinase activity
VEJY3_13920	COG1410	methionine synthase
VEJY3_13920	COG0646	methionine synthase
VEJY3_13930	COG3335	DDE superfamily endonuclease
VEJY3_13935	COG0175	sulfate reduction
VEJY3_13940	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
VEJY3_13945	COG0369	Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L- cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH - FAD - FMN to the hemoprotein component
VEJY3_13965	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
VEJY3_13970	COG0735	belongs to the Fur family
VEJY3_13980	COG0166	Belongs to the GPI family
VEJY3_13985	COG0432	Pfam Uncharacterised protein family UPF0047
VEJY3_13990	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
VEJY3_13995	COG0305	Participates in initiation and elongation during chromosome replication
VEJY3_14015	COG2965	DNA replication, synthesis of RNA primer
VEJY3_14020	COG0360	Binds together with S18 to 16S ribosomal RNA
VEJY3_14025	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
VEJY3_14030	COG0338	D12 class N6 adenine-specific DNA methyltransferase
VEJY3_14040	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
VEJY3_14045	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
VEJY3_14075	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
VEJY3_14085	COG0678	peroxiredoxin activity
VEJY3_14085	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
VEJY3_14090	COG0165	Argininosuccinate lyase
VEJY3_14090	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
VEJY3_14095	COG0137	argininosuccinate synthase activity
VEJY3_14100	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
VEJY3_14105	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
VEJY3_14115	COG2352	Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle
VEJY3_14125	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
VEJY3_14130	COG0460	homoserine dehydrogenase
VEJY3_14130	COG0527	aspartate kinase activity
VEJY3_14135	COG0626	cystathionine gamma-synthase activity
VEJY3_14145	COG0281	malic enzyme
VEJY3_14155	COG2906	2 iron, 2 sulfur cluster binding
VEJY3_14165	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
VEJY3_14185	COG2923	Belongs to the DsrF TusC family
VEJY3_14190	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
VEJY3_14195	COG2964	Protein conserved in bacteria
VEJY3_14200	COG0545	Peptidyl-prolyl cis-trans isomerase
VEJY3_14210	COG2900	Belongs to the SlyX family
VEJY3_14220	COG1047	Peptidyl-prolyl cis-trans
VEJY3_14235	COG2249	NAD(P)H dehydrogenase (quinone) activity
VEJY3_14240	COG0488	(ABC) transporter
VEJY3_14250	COG0429	hydrolase of the alpha beta-hydrolase fold
VEJY3_14255	COG3089	Belongs to the UPF0270 family
VEJY3_14260	COG3954	Phosphoribulokinase
VEJY3_14265	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
VEJY3_14275	COG1012	belongs to the aldehyde dehydrogenase family
VEJY3_14285	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
VEJY3_14290	COG0512	Glutamine amidotransferase of anthranilate synthase
VEJY3_14295	COG0180	Tryptophanyl-tRNA synthetase
VEJY3_14300	COG0546	phosphoglycolate phosphatase activity
VEJY3_14305	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
VEJY3_14310	COG0557	exoribonuclease II activity
VEJY3_14315	COG1959	2 iron, 2 sulfur cluster binding
VEJY3_14320	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
VEJY3_14320	COG1017	nitric oxide dioxygenase activity
VEJY3_14325	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
VEJY3_14330	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
VEJY3_14335	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
VEJY3_14340	COG0330	HflC and HflK could
VEJY3_14345	COG0330	HflC and HflK could
VEJY3_14350	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
VEJY3_14360	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
VEJY3_14365	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
VEJY3_14370	COG0860	N-Acetylmuramoyl-L-alanine amidase
VEJY3_14375	COG0802	atpase or kinase
VEJY3_14380	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
VEJY3_14385	COG1949	3'-to-5' exoribonuclease specific for small oligoribonucleotides
VEJY3_14390	COG1162	GTPase activity
VEJY3_14400	COG0471	metal ion transport
VEJY3_14410	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
VEJY3_14415	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
VEJY3_14425	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
VEJY3_14430	COG1045	serine acetyltransferase
VEJY3_14435	COG4942	peptidase
VEJY3_14455	COG2269	With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF-P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta- lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P
VEJY3_14460	COG1053	succinate dehydrogenase
VEJY3_14465	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
VEJY3_14485	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
VEJY3_14490	COG1509	lysine 2,3-aminomutase activity
VEJY3_14495	COG1285	pathogenesis
VEJY3_14510	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
VEJY3_14515	COG0534	Mate efflux family protein
VEJY3_14520	COG0205	6-phosphofructokinase activity
VEJY3_14530	COG3678	ATP-independent chaperone mediated protein folding
VEJY3_14535	COG0745	RESPONSE REGULATOR receiver
VEJY3_14540	COG2205	protein histidine kinase activity
VEJY3_14545	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
VEJY3_14550	COG3030	protein affecting phage T7 exclusion by the F plasmid
VEJY3_14555	COG1027	Aspartate ammonia-lyase
VEJY3_14560	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
VEJY3_14565	COG4232	protein-disulfide reductase activity
VEJY3_14575	COG3263	regulation of cellular component size
VEJY3_14585	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
VEJY3_14600	COG0784	Response regulator, receiver
VEJY3_14600	COG2205	protein histidine kinase activity
VEJY3_14600	COG2198	Histidine kinase
VEJY3_14605	COG2814	Major facilitator Superfamily
VEJY3_14620	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
VEJY3_14625	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
VEJY3_14630	COG0511	ligase activity, forming carbon-carbon bonds
VEJY3_14635	COG0439	Biotin carboxylase
VEJY3_14640	COG2264	protein methyltransferase activity
VEJY3_14645	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
VEJY3_14650	COG2901	Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters
VEJY3_14690	COG3710	Transcriptional regulator
VEJY3_14705	COG0138	bifunctional purine biosynthesis protein purh
VEJY3_14710	COG0151	Belongs to the GarS family
VEJY3_14725	COG1253	flavin adenine dinucleotide binding
VEJY3_14730	COG3068	Protein conserved in bacteria
VEJY3_14740	COG1573	uracil-dna glycosylase
VEJY3_14745	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
VEJY3_14750	COG2816	NAD+ diphosphatase activity
VEJY3_14755	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
VEJY3_14760	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
VEJY3_14765	COG0085	RNA polymerase activity
VEJY3_14770	COG0222	ribosome binding
VEJY3_14775	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
VEJY3_14790	COG0250	Participates in transcription elongation, termination and antitermination
VEJY3_14795	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
VEJY3_14820	COG0812	UDP-N-acetylmuramate dehydrogenase activity
VEJY3_14830	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
VEJY3_14850	COG4206	TonB-dependent receptor
VEJY3_14870	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
VEJY3_14875	COG0534	Mate efflux family protein
VEJY3_14880	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
VEJY3_14885	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
VEJY3_14890	COG2937	Belongs to the GPAT DAPAT family
VEJY3_14895	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
VEJY3_14900	COG3161	chorismate lyase activity
VEJY3_14905	COG1580	Controls the rotational direction of flagella during chemotaxis
VEJY3_14910	COG0705	Rhomboid family
VEJY3_14925	COG2177	Part of the ABC transporter FtsEX involved in
VEJY3_14930	COG2884	Cell division ATP-binding protein ftsE
VEJY3_14935	COG0552	protein localization to endoplasmic reticulum
VEJY3_14935	COG0552	protein localization to endoplasmic reticulum
VEJY3_14940	COG0742	ribosomal rna small subunit methyltransferase
VEJY3_14990	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
VEJY3_14995	COG0640	Transcriptional regulator
VEJY3_15000	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
VEJY3_15005	COG1280	lysine exporter protein (LysE YggA)
VEJY3_15010	COG2267	carboxylic ester hydrolase activity
VEJY3_15015	COG0561	phosphatase activity
VEJY3_15035	COG1011	Hydrolase
VEJY3_15040	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
VEJY3_15050	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
VEJY3_15055	COG0019	diaminopimelate decarboxylase activity
VEJY3_15065	COG1965	Belongs to the frataxin family
VEJY3_15070	COG3072	Adenylate cyclase
VEJY3_15075	COG0181	hydroxymethylbilane synthase activity
VEJY3_15080	COG1587	Uroporphyrinogen-III synthase
VEJY3_15085	COG2959	enzyme of heme biosynthesis
VEJY3_15090	COG3071	HemY protein
VEJY3_15110	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
VEJY3_15120	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
VEJY3_15125	COG3118	belongs to the thioredoxin family
VEJY3_15130	COG0513	Belongs to the DEAD box helicase family
VEJY3_15135	COG0248	Ppx GppA phosphatase
VEJY3_15140	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
VEJY3_15150	COG0514	ATP-dependent DNA helicase (RecQ)
VEJY3_15155	COG2962	Rard protein
VEJY3_15165	COG1280	lysine exporter protein (LysE YggA)
VEJY3_15170	COG0405	Gamma-glutamyltransferase
VEJY3_15180	COG0210	DNA helicase
VEJY3_15190	COG3220	belongs to the UPF0276 family
VEJY3_15220	COG0006	proline dipeptidase activity
VEJY3_15220	COG0006	proline dipeptidase activity
VEJY3_15230	COG2022	thiamine diphosphate biosynthetic process
VEJY3_15235	COG2104	thiamine diphosphate biosynthetic process
VEJY3_15240	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
VEJY3_15250	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
VEJY3_15255	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
VEJY3_15260	COG2132	Multicopper oxidase
VEJY3_15265	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
VEJY3_15275	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
VEJY3_15280	COG0408	coproporphyrinogen oxidase activity
VEJY3_15285	COG0009	L-threonylcarbamoyladenylate synthase
VEJY3_15290	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
VEJY3_15295	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
VEJY3_15300	COG0551	DNA topoisomerase type I activity
VEJY3_15305	COG2922	Belongs to the Smg family
VEJY3_15310	COG0758	DNA mediated transformation
VEJY3_15330	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
VEJY3_15330	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
VEJY3_15335	COG0569	domain protein
VEJY3_15340	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
VEJY3_15350	COG1272	protein, Hemolysin III
VEJY3_15355	COG4326	sporulation control protein
VEJY3_15365	COG3084	Protein conserved in bacteria
VEJY3_15375	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
VEJY3_15380	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
VEJY3_15385	COG0204	Acyl-transferase
VEJY3_15395	COG0606	chelatase, subunit chli
VEJY3_15405	COG3978	acetolactate synthase activity
VEJY3_15410	COG0129	dihydroxy-acid dehydratase activity
VEJY3_15420	COG0583	DNA-binding transcription factor activity
VEJY3_15425	COG2814	Major facilitator Superfamily
VEJY3_15430	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
VEJY3_15435	COG0765	amino acid transport
VEJY3_15445	COG0355	proton-transporting ATP synthase activity, rotational mechanism
VEJY3_15450	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
VEJY3_15455	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
VEJY3_15460	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
VEJY3_15465	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
VEJY3_15480	COG0356	it plays a direct role in the translocation of protons across the membrane
VEJY3_15485	COG3312	ion transport
VEJY3_15490	COG1475	DNA binding
VEJY3_15495	COG1192	Involved in chromosome partitioning
VEJY3_15786	COG4608	Belongs to the ABC transporter superfamily
VEJY3_15791	COG0444	Belongs to the ABC transporter superfamily
VEJY3_15816	COG1136	(ABC) transporter
VEJY3_15821	COG4591	ABC-type transport system involved in lipoprotein release permease component
VEJY3_15836	COG3275	phosphorelay sensor kinase activity
VEJY3_15841	COG3279	Response regulator of the LytR AlgR family
VEJY3_15846	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
VEJY3_15856	COG0786	glutamate:sodium symporter activity
VEJY3_15866	COG1131	(ABC) transporter
VEJY3_15881	COG0363	glucosamine-6-phosphate deaminase activity
VEJY3_15901	COG1741	Belongs to the pirin family
VEJY3_15906	COG2259	Doxx family
VEJY3_15916	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
VEJY3_15921	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
VEJY3_15926	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
VEJY3_15961	COG3123	guanosine phosphorylase activity
VEJY3_15971	COG5001	Diguanylate cyclase
VEJY3_15976	COG0534	Mate efflux family protein
VEJY3_15981	COG0564	pseudouridine synthase activity
VEJY3_15991	COG0583	DNA-binding transcription factor activity
VEJY3_15996	COG0561	phosphatase activity
VEJY3_16001	COG2199	diguanylate cyclase activity
VEJY3_16016	COG1062	S-(hydroxymethyl)glutathione dehydrogenase activity
VEJY3_16031	COG0583	DNA-binding transcription factor activity
VEJY3_16036	COG1414	Transcriptional regulator
VEJY3_16041	COG1028	Short-chain dehydrogenase reductase Sdr
VEJY3_16056	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
VEJY3_16061	COG0800	Aldolase
VEJY3_16066	COG2375	cellular response to nickel ion
VEJY3_16091	COG3047	cAMP biosynthetic process
VEJY3_16106	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
VEJY3_16141	COG3835	regulator
VEJY3_16151	COG1929	Belongs to the glycerate kinase type-1 family
VEJY3_16166	COG3005	denitrification pathway
VEJY3_16171	COG0243	molybdopterin cofactor binding
VEJY3_16191	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
VEJY3_16196	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
VEJY3_16201	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
VEJY3_16206	COG1116	anion transmembrane transporter activity
VEJY3_16211	COG0351	phosphomethylpyrimidine kinase
VEJY3_16216	COG0312	modulator of DNA gyrase
VEJY3_16221	COG0312	modulator of DNA gyrase
VEJY3_16226	COG1901	pseudouridine methyltransferase
VEJY3_16251	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
VEJY3_16261	COG0584	glycerophosphoryl diester phosphodiesterase
VEJY3_16271	COG0745	RESPONSE REGULATOR receiver
VEJY3_16276	COG2205	protein histidine kinase activity
VEJY3_16291	COG0811	peptide transport
VEJY3_16296	COG0811	peptide transport
VEJY3_16301	COG0848	biopolymer transport protein
VEJY3_16321	COG1770	oligopeptidase
VEJY3_16326	COG2814	Major facilitator Superfamily
VEJY3_16331	COG0010	Belongs to the arginase family
VEJY3_16336	COG1166	arginine decarboxylase activity
VEJY3_16346	COG4067	protein conserved in archaea
VEJY3_16346	COG0189	ligase activity
VEJY3_16351	COG0189	ligase activity
VEJY3_16376	COG3706	GGDEF domain
VEJY3_16391	COG0579	oxidoreductase
VEJY3_16401	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
VEJY3_16431	COG3706	GGDEF domain
VEJY3_16436	COG3046	protein related to deoxyribodipyrimidine photolyase
VEJY3_16451	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
VEJY3_16451	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
VEJY3_16456	COG1765	OsmC-like protein
VEJY3_16466	COG3152	Membrane
VEJY3_16506	COG1011	Hydrolase
VEJY3_16521	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
VEJY3_16526	COG1136	(ABC) transporter
VEJY3_16526	COG0577	efflux transmembrane transporter activity
VEJY3_16531	COG1538	Outer membrane efflux protein
VEJY3_16536	COG3240	lipase activity
VEJY3_16566	COG1840	ABC-type Fe3 transport system, periplasmic component
VEJY3_16571	COG0456	acetyltransferase
VEJY3_16571	COG1846	Transcriptional regulator
VEJY3_16576	COG3842	ATPase activity
VEJY3_16596	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
VEJY3_16601	COG2866	Carboxypeptidase
VEJY3_16616	COG1760	l-serine dehydratase
VEJY3_16636	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
VEJY3_16651	COG1304	FMN binding
VEJY3_16676	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
VEJY3_16681	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
VEJY3_16686	COG0459	protein refolding
VEJY3_16691	COG1280	lysine exporter protein (LysE YggA)
VEJY3_16706	COG2207	Transcriptional regulator
VEJY3_16711	COG4303	Ethanolamine ammonia lyase large subunit
VEJY3_16716	COG4302	ethanolamine ammonia-lyase activity
VEJY3_16721	COG0531	amino acid
VEJY3_16736	COG1335	isochorismatase
VEJY3_16746	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
VEJY3_16761	COG0697	spore germination
VEJY3_16766	COG0583	DNA-binding transcription factor activity
VEJY3_16771	COG3015	lipoprotein NlpE involved in copper resistance
VEJY3_16776	COG1342	Belongs to the UPF0251 family
VEJY3_16796	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
VEJY3_16831	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
VEJY3_16836	COG1566	PFAM secretion protein HlyD family protein
VEJY3_16856	COG3842	ATPase activity
VEJY3_16886	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
VEJY3_16921	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
VEJY3_16926	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
VEJY3_16941	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
VEJY3_16941	COG0574	Belongs to the PEP-utilizing enzyme family
VEJY3_16946	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
VEJY3_16956	COG0583	DNA-binding transcription factor activity
VEJY3_16961	COG0659	secondary active sulfate transmembrane transporter activity
VEJY3_16966	COG0318	PFAM AMP-dependent synthetase and ligase
VEJY3_16971	COG4191	Histidine kinase
VEJY3_16976	COG4566	intracellular signal transduction
VEJY3_16981	COG2814	Major facilitator Superfamily
VEJY3_16986	COG0583	DNA-binding transcription factor activity
VEJY3_16996	COG0697	spore germination
VEJY3_17006	COG2188	Transcriptional regulator
VEJY3_17021	COG0557	exoribonuclease II activity
VEJY3_17026	COG1278	Cold shock
VEJY3_17046	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
VEJY3_17056	COG2233	PERMEase
VEJY3_17091	COG1309	transcriptional regulator
VEJY3_17121	COG4565	transcriptional regulatory protein
VEJY3_17131	COG1883	Na -transporting methylmalonyl-CoA oxaloacetate decarboxylase, beta subunit
VEJY3_17136	COG0511	ligase activity, forming carbon-carbon bonds
VEJY3_17136	COG5016	pyruvate
VEJY3_17141	COG3630	sodium ion export across plasma membrane
VEJY3_17151	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
VEJY3_17156	COG3052	prosthetic group binding
VEJY3_17161	COG2301	Belongs to the HpcH HpaI aldolase family
VEJY3_17166	COG3051	citrate lyase alpha subunit
VEJY3_17171	COG3697	Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase
VEJY3_17176	COG1767	triphosphoribosyl-dephospho-CoA synthase activity
VEJY3_17191	COG2986	histidine ammonia-lyase
VEJY3_17196	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
VEJY3_17201	COG3122	Protein conserved in bacteria
VEJY3_17206	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
VEJY3_17211	COG1012	belongs to the aldehyde dehydrogenase family
VEJY3_17216	COG1522	sequence-specific DNA binding
VEJY3_17221	COG3608	succinylglutamate desuccinylase aspartoacylase
VEJY3_17226	COG0006	proline dipeptidase activity
VEJY3_17231	COG1609	Transcriptional regulator
VEJY3_17236	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
VEJY3_17241	COG2723	6-phospho-beta-galactosidase activity
VEJY3_17246	COG2190	(PTS) system
VEJY3_17246	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
VEJY3_17246	COG1263	PTS System
VEJY3_17251	COG2723	6-phospho-beta-galactosidase activity
VEJY3_17261	COG1028	Short-chain dehydrogenase reductase Sdr
VEJY3_17276	COG0583	DNA-binding transcription factor activity
VEJY3_17286	COG0513	Belongs to the DEAD box helicase family
VEJY3_17321	COG1028	Short-chain dehydrogenase reductase Sdr
VEJY3_17326	COG0625	glutathione transferase activity
VEJY3_17341	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
VEJY3_17356	COG1278	Cold shock
VEJY3_17361	COG1741	Belongs to the pirin family
VEJY3_17366	COG4667	esterase of the alpha-beta hydrolase superfamily
VEJY3_17376	COG1846	Transcriptional regulator
VEJY3_17381	COG3304	Inner membrane component domain
VEJY3_17386	COG0673	inositol 2-dehydrogenase activity
VEJY3_17391	COG2194	sulfuric ester hydrolase activity
VEJY3_17396	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
VEJY3_17411	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
VEJY3_17426	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
VEJY3_17446	COG1418	mRNA catabolic process
VEJY3_17451	COG2239	Acts as a magnesium transporter
VEJY3_17456	COG0661	Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis
VEJY3_17471	COG0531	amino acid
VEJY3_17476	COG1522	sequence-specific DNA binding
VEJY3_17501	COG0673	inositol 2-dehydrogenase activity
VEJY3_17531	COG1879	ABC-type sugar transport system periplasmic component
VEJY3_17536	COG0784	Response regulator, receiver
VEJY3_17536	COG2205	protein histidine kinase activity
VEJY3_17566	COG1522	sequence-specific DNA binding
VEJY3_17586	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
VEJY3_17591	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
VEJY3_17596	COG1280	lysine exporter protein (LysE YggA)
VEJY3_17606	COG0183	Belongs to the thiolase family
VEJY3_17626	COG3005	denitrification pathway
VEJY3_17636	COG0243	molybdopterin cofactor binding
VEJY3_17646	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
VEJY3_17651	COG3850	Histidine kinase
VEJY3_17656	COG2197	response regulator
VEJY3_17671	COG2195	Cleaves the N-terminal amino acid of tripeptides
VEJY3_17691	COG0840	transmembrane signaling receptor activity
VEJY3_17701	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
VEJY3_17711	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
VEJY3_17716	COG0840	transmembrane signaling receptor activity
VEJY3_17721	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
VEJY3_17726	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
VEJY3_17746	COG2897	thiosulfate sulfurtransferase activity
VEJY3_17756	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
VEJY3_17776	COG0038	chloride channel
VEJY3_17791	COG4989	oxidoreductase activity
VEJY3_17796	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
VEJY3_17796	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
VEJY3_17801	COG0516	GMP reductase activity
VEJY3_17806	COG4974	Belongs to the 'phage' integrase family
VEJY3_17816	COG1073	alpha beta
VEJY3_17836	COG1902	pentaerythritol trinitrate reductase activity
VEJY3_17846	COG1073	alpha beta
VEJY3_17851	COG1073	alpha beta
VEJY3_17861	COG2207	Transcriptional regulator
VEJY3_17866	COG1414	Transcriptional regulator
VEJY3_17871	COG2267	carboxylic ester hydrolase activity
VEJY3_17876	COG0183	Belongs to the thiolase family
VEJY3_17881	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
VEJY3_17886	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
VEJY3_17896	COG4948	Mandelate Racemase Muconate Lactonizing
VEJY3_17906	COG3485	protocatechuate 3,4-dioxygenase
VEJY3_17931	COG2814	Major facilitator Superfamily
VEJY3_17936	COG0583	DNA-binding transcription factor activity
VEJY3_17941	COG1473	amidohydrolase
VEJY3_17946	COG1288	antiporter activity
VEJY3_17956	COG2423	ornithine cyclodeaminase activity
VEJY3_18001	COG0579	oxidoreductase
VEJY3_18021	COG0583	DNA-binding transcription factor activity
VEJY3_18031	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
VEJY3_18036	COG0667	Aldo Keto reductase
VEJY3_18051	COG0583	DNA-binding transcription factor activity
VEJY3_18056	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
VEJY3_18081	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
VEJY3_18086	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
VEJY3_18091	COG2159	amidohydrolase
VEJY3_18096	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
VEJY3_18126	COG2197	response regulator
VEJY3_18176	COG1132	(ABC) transporter
VEJY3_18186	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
VEJY3_18231	COG1028	Short-chain dehydrogenase reductase Sdr
VEJY3_18251	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
VEJY3_18256	COG0402	S-adenosylhomocysteine deaminase activity
VEJY3_18261	COG0656	L-ascorbic acid biosynthetic process
VEJY3_18266	COG1349	DNA-binding transcription factor activity
VEJY3_18271	COG2084	Dehydrogenase
VEJY3_18276	COG3395	kinase activity
VEJY3_18281	COG0235	Class ii aldolase
VEJY3_18286	COG3622	Belongs to the hyi family
VEJY3_18291	COG2610	gluconate transmembrane transporter activity
VEJY3_18296	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
VEJY3_18296	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
VEJY3_18321	COG1355	regulation of microtubule-based process
VEJY3_18336	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
VEJY3_18346	COG2814	Major facilitator Superfamily
VEJY3_18356	COG0840	transmembrane signaling receptor activity
VEJY3_18361	COG0110	maltose O-acetyltransferase activity
VEJY3_18371	COG0583	DNA-binding transcription factor activity
VEJY3_18381	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
VEJY3_18381	COG2205	protein histidine kinase activity
VEJY3_18446	COG3474	cytochrome
VEJY3_18456	COG3264	Mechanosensitive ion channel
VEJY3_18456	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
VEJY3_18466	COG0583	DNA-binding transcription factor activity
VEJY3_18491	COG4948	Mandelate Racemase Muconate Lactonizing
VEJY3_18501	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
VEJY3_18536	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
VEJY3_18541	COG1960	acyl-CoA dehydrogenase activity
VEJY3_18551	COG0183	Belongs to the thiolase family
VEJY3_18561	COG1960	acyl-CoA dehydrogenase activity
VEJY3_18566	COG1024	Enoyl-CoA hydratase
VEJY3_18581	COG1028	Short-chain dehydrogenase reductase Sdr
VEJY3_18586	COG1309	transcriptional regulator
VEJY3_18591	COG1012	belongs to the aldehyde dehydrogenase family
VEJY3_18606	COG4176	ABC-type proline glycine betaine transport system permease component
VEJY3_18611	COG4175	Glycine betaine
VEJY3_18611	COG0517	IMP dehydrogenase activity
VEJY3_18616	COG0330	HflC and HflK could
VEJY3_18626	COG5001	Diguanylate cyclase
VEJY3_18626	COG3300	MHYT domain
VEJY3_18656	COG2207	Transcriptional regulator
VEJY3_18661	COG2197	response regulator
VEJY3_18666	COG2815	serine threonine protein kinase
VEJY3_18666	COG0515	serine threonine protein kinase
VEJY3_18671	COG2223	nitrite transmembrane transporter activity
VEJY3_18681	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
VEJY3_18691	COG0243	molybdopterin cofactor binding
VEJY3_18781	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
VEJY3_18811	COG3265	gluconokinase activity
VEJY3_18826	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
VEJY3_18831	COG1280	lysine exporter protein (LysE YggA)
VEJY3_18841	COG4628	conserved protein (DUF2132)
VEJY3_18846	COG1278	Cold shock
VEJY3_18876	COG4657	Part of a membrane complex involved in electron transport
VEJY3_18881	COG2878	Part of a membrane complex involved in electron transport
VEJY3_18891	COG4658	electron transport chain
VEJY3_18941	COG5001	Diguanylate cyclase
VEJY3_18946	COG1869	D-ribose catabolic process
VEJY3_18951	COG1129	ABC transporter
VEJY3_18956	COG1172	Belongs to the binding-protein-dependent transport system permease family
VEJY3_18961	COG1879	ABC-type sugar transport system periplasmic component
VEJY3_18966	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
VEJY3_18971	COG1609	Transcriptional regulator
VEJY3_18976	COG0789	Transcriptional regulator
VEJY3_18991	COG1289	transmembrane transporter activity
VEJY3_18996	COG0210	DNA helicase
VEJY3_19001	COG1803	Methylglyoxal synthase
VEJY3_19006	COG1879	ABC-type sugar transport system periplasmic component
VEJY3_19011	COG2205	protein histidine kinase activity
VEJY3_19011	COG2198	Histidine kinase
VEJY3_19011	COG0784	Response regulator, receiver
VEJY3_19031	COG3119	arylsulfatase activity
VEJY3_19036	COG0641	radical SAM
VEJY3_19041	COG0714	Associated with various cellular activities
VEJY3_19076	COG1597	lipid kinase activity
VEJY3_19086	COG2223	nitrite transmembrane transporter activity
VEJY3_19096	COG0501	Belongs to the peptidase M48B family
VEJY3_19101	COG1704	LemA family
VEJY3_19106	COG3069	C4-dicarboxylate transmembrane transporter activity
VEJY3_19116	COG1214	PFAM Peptidase M22, glycoprotease
VEJY3_19116	COG0456	acetyltransferase
VEJY3_19126	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
VEJY3_19131	COG0784	Response regulator, receiver
VEJY3_19131	COG2205	protein histidine kinase activity
VEJY3_19136	COG5001	Diguanylate cyclase
VEJY3_19136	COG3300	MHYT domain
VEJY3_19146	COG3706	GGDEF domain
VEJY3_19156	COG2197	response regulator
VEJY3_19201	COG0471	metal ion transport
VEJY3_19211	COG3290	protein histidine kinase activity
VEJY3_19226	COG0069	glutamate synthase activity
VEJY3_19231	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
VEJY3_19266	COG4663	Part of the tripartite ATP-independent periplasmic (TRAP) transport system
VEJY3_19291	COG1028	Short-chain dehydrogenase reductase Sdr
VEJY3_19296	COG1737	Transcriptional regulator
VEJY3_19306	COG0765	amino acid transport
VEJY3_19311	COG0765	amino acid transport
VEJY3_19321	COG4166	transmembrane transport
VEJY3_19326	COG0601	transmembrane transport
VEJY3_19331	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
VEJY3_19336	COG4172	Belongs to the ABC transporter superfamily
VEJY3_19351	COG2205	protein histidine kinase activity
VEJY3_19356	COG0745	RESPONSE REGULATOR receiver
VEJY3_19366	COG1846	Transcriptional regulator
VEJY3_19371	COG2130	NADP-dependent
VEJY3_19376	COG0420	3'-5' exonuclease activity
VEJY3_19381	COG0419	ATPase involved in DNA repair
VEJY3_19401	COG1733	regulation of RNA biosynthetic process
VEJY3_19406	COG0702	epimerase
VEJY3_19426	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
VEJY3_19446	COG0251	oxidation-reduction process
VEJY3_19456	COG3040	lipid binding
VEJY3_19471	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
VEJY3_19486	COG2425	protein containing a von Willebrand factor type A (vWA) domain
VEJY3_19491	COG0583	DNA-binding transcription factor activity
VEJY3_19496	COG0277	FAD linked oxidase domain protein
VEJY3_19526	COG0745	RESPONSE REGULATOR receiver
VEJY3_19526	COG3706	GGDEF domain
VEJY3_19536	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
VEJY3_19536	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
VEJY3_19551	COG5001	Diguanylate cyclase
VEJY3_19556	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
VEJY3_19561	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
VEJY3_19566	COG2146	nitrite reductase [NAD(P)H] activity
VEJY3_19571	COG2116	formate transmembrane transporter activity
VEJY3_19591	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
VEJY3_19611	COG0477	Major facilitator Superfamily
VEJY3_19616	COG3118	belongs to the thioredoxin family
VEJY3_19621	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
VEJY3_19641	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
VEJY3_19646	COG0583	DNA-binding transcription factor activity
VEJY3_19696	COG1328	CTP reductase activity
VEJY3_19701	COG0602	queuosine metabolic process
VEJY3_19706	COG0534	Mate efflux family protein
VEJY3_19711	COG2207	Transcriptional regulator
VEJY3_19721	COG0189	ligase activity
VEJY3_19721	COG4067	protein conserved in archaea
VEJY3_19731	COG1492	cobalamin metabolic process
VEJY3_19736	COG0725	ABC transporter, periplasmic molybdate-binding protein
VEJY3_19741	COG4149	molybdate abc transporter
VEJY3_19746	COG4148	Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system
VEJY3_19756	COG5001	Diguanylate cyclase
VEJY3_19756	COG2203	Gaf domain
VEJY3_19756	COG4251	negative regulation of phosphorylation
VEJY3_19756	COG3706	GGDEF domain
VEJY3_19761	COG3706	GGDEF domain
VEJY3_19776	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
VEJY3_19781	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
VEJY3_19786	COG2205	protein histidine kinase activity
VEJY3_19791	COG0745	RESPONSE REGULATOR receiver
VEJY3_19806	COG3140	Belongs to the UPF0181 family
VEJY3_19831	COG2801	Transposase and inactivated derivatives
VEJY3_19836	COG0023	Translation Initiation Factor
VEJY3_19846	COG1181	Belongs to the D-alanine--D-alanine ligase family
VEJY3_19856	COG0045	succinate-CoA ligase (ADP-forming) activity
VEJY3_19856	COG1042	CoA-binding domain protein
VEJY3_19856	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
VEJY3_19861	COG0583	DNA-binding transcription factor activity
VEJY3_19881	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
VEJY3_19886	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
VEJY3_19891	COG1984	allophanate hydrolase subunit 2
VEJY3_19901	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
VEJY3_19906	COG4181	ATPase activity
VEJY3_19916	COG3007	enoyl-[acyl-carrier-protein] reductase (NADH) activity
VEJY3_19921	COG5001	Diguanylate cyclase
VEJY3_19921	COG3300	MHYT domain
VEJY3_19946	COG1324	tolerance protein
VEJY3_19966	COG2050	protein possibly involved in aromatic compounds catabolism
VEJY3_19981	COG2067	long-chain fatty acid transport protein
VEJY3_19986	COG2267	carboxylic ester hydrolase activity
VEJY3_20001	COG0861	Integral membrane protein TerC family
VEJY3_20006	COG0737	Belongs to the 5'-nucleotidase family
VEJY3_20011	COG3593	DNA synthesis involved in DNA repair
VEJY3_20021	COG0583	DNA-binding transcription factor activity
VEJY3_20026	COG2116	formate transmembrane transporter activity
VEJY3_20031	COG2353	YceI-like domain
VEJY3_20036	COG3038	cytochrome b561
VEJY3_20051	COG4943	cyclic-guanylate-specific phosphodiesterase activity
VEJY3_20056	COG0513	Belongs to the DEAD box helicase family
VEJY3_20061	COG3124	Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP
VEJY3_20076	COG0546	phosphoglycolate phosphatase activity
VEJY3_20091	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
VEJY3_20096	COG2759	Belongs to the formate--tetrahydrofolate ligase family
VEJY3_20101	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
VEJY3_20111	COG2207	Transcriptional regulator
VEJY3_20116	COG1979	alcohol dehydrogenase
VEJY3_20126	COG1126	abc transporter atp-binding protein
VEJY3_20131	COG0765	amino acid transport
VEJY3_20136	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
VEJY3_20141	COG0765	amino acid transport
VEJY3_20156	COG1609	Transcriptional regulator
VEJY3_20161	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
VEJY3_20161	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
VEJY3_20166	COG1105	Belongs to the carbohydrate kinase PfkB family
VEJY3_20171	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
VEJY3_20171	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
VEJY3_20171	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
VEJY3_20186	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
VEJY3_20196	COG0404	The glycine cleavage system catalyzes the degradation of glycine
VEJY3_20206	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
VEJY3_20211	COG0509	glycine decarboxylation via glycine cleavage system
VEJY3_20266	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
VEJY3_20276	COG0814	amino acid
VEJY3_20311	COG0443	Heat shock 70 kDa protein
VEJY3_20351	COG1349	DNA-binding transcription factor activity
VEJY3_20356	COG0673	inositol 2-dehydrogenase activity
VEJY3_20361	COG4702	Belongs to the UPF0303 family
VEJY3_20376	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
VEJY3_20381	COG0508	dehydrogenase complex catalyzes the overall conversion of
VEJY3_20381	COG0022	dehydrogenase e1 component
VEJY3_20386	COG0508	dehydrogenase complex catalyzes the overall conversion of
VEJY3_20396	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
VEJY3_20396	COG0574	Belongs to the PEP-utilizing enzyme family
VEJY3_20401	COG0543	2 iron, 2 sulfur cluster binding
VEJY3_20411	COG3383	formate dehydrogenase (NAD+) activity
VEJY3_20441	COG3604	Transcriptional regulator
VEJY3_20451	COG3949	Membrane
VEJY3_20456	COG1404	Belongs to the peptidase S8 family
VEJY3_20471	COG0583	DNA-binding transcription factor activity
VEJY3_20481	COG1115	amino acid carrier protein
VEJY3_20486	COG4160	amino acid transport
VEJY3_20491	COG4215	(ABC) transporter
VEJY3_20496	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
VEJY3_20501	COG1126	abc transporter atp-binding protein
VEJY3_20516	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
VEJY3_20526	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
VEJY3_20541	COG2040	homocysteine
VEJY3_20546	COG0531	amino acid
VEJY3_20556	COG1902	pentaerythritol trinitrate reductase activity
VEJY3_20561	COG0109	protoheme IX farnesyltransferase activity
VEJY3_20566	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
VEJY3_20571	COG1845	cytochrome c oxidase, subunit III
VEJY3_20576	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
VEJY3_20581	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
VEJY3_20586	COG1028	Short-chain dehydrogenase reductase Sdr
VEJY3_20596	COG1024	Enoyl-CoA hydratase
VEJY3_20601	COG1024	Enoyl-CoA hydratase
VEJY3_20606	COG1960	acyl-CoA dehydrogenase activity
VEJY3_20616	COG0183	Belongs to the thiolase family
VEJY3_20626	COG1960	acyl-CoA dehydrogenase activity
VEJY3_20631	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
VEJY3_20646	COG5413	integral membrane protein
VEJY3_20671	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
VEJY3_20681	COG1733	regulation of RNA biosynthetic process
VEJY3_20691	COG3550	peptidyl-serine autophosphorylation
VEJY3_20716	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
VEJY3_20721	COG0569	domain protein
VEJY3_20726	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
VEJY3_20731	COG0745	RESPONSE REGULATOR receiver
VEJY3_20736	COG2205	protein histidine kinase activity
VEJY3_20741	COG0668	transmembrane transport
VEJY3_20746	COG1477	protein flavinylation
VEJY3_20756	COG1968	undecaprenyl-diphosphatase activity
VEJY3_20766	COG0488	(ABC) transporter
VEJY3_20776	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
VEJY3_20811	COG0840	transmembrane signaling receptor activity
VEJY3_20876	COG1484	DNA-dependent DNA replication
VEJY3_20886	COG3706	GGDEF domain
VEJY3_20906	COG5001	Diguanylate cyclase
VEJY3_20906	COG3300	MHYT domain
VEJY3_20926	COG0583	DNA-binding transcription factor activity
VEJY3_20931	COG2267	carboxylic ester hydrolase activity
VEJY3_20936	COG1279	arginine transmembrane transporter activity
VEJY3_20951	COG1473	amidohydrolase
VEJY3_20966	COG1522	sequence-specific DNA binding
VEJY3_20991	COG2181	nitrate reductase activity
VEJY3_20996	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
VEJY3_21001	COG1140	nitrate reductase beta subunit
VEJY3_21006	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
VEJY3_21011	COG2223	nitrite transmembrane transporter activity
VEJY3_21016	COG3850	Histidine kinase
VEJY3_21021	COG2197	response regulator
VEJY3_21026	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
VEJY3_21066	COG1742	UPF0060 membrane protein
VEJY3_21126	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
VEJY3_21136	COG0513	Belongs to the DEAD box helicase family
VEJY3_21141	COG1454	alcohol dehydrogenase
VEJY3_21146	COG0235	Class ii aldolase
VEJY3_21151	COG1070	Carbohydrate kinase
VEJY3_21156	COG2407	Converts the aldose L-fucose into the corresponding ketose L-fuculose
VEJY3_21161	COG1349	DNA-binding transcription factor activity
VEJY3_21166	COG1320	monovalent cation:proton antiporter activity
VEJY3_21171	COG2212	antiporter activity
VEJY3_21191	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
VEJY3_21191	COG2111	Na H antiporter
VEJY3_21196	COG0589	response to stress
VEJY3_21201	COG4776	Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction
VEJY3_21211	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
VEJY3_21226	COG0628	permease
VEJY3_21246	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
VEJY3_21261	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
VEJY3_21261	COG3264	Mechanosensitive ion channel
VEJY3_21276	COG1127	ABC transporter
VEJY3_21281	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
VEJY3_21316	COG3706	GGDEF domain
VEJY3_21316	COG0745	RESPONSE REGULATOR receiver
VEJY3_21321	COG2176	DNA-directed DNA polymerase activity
VEJY3_21331	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
VEJY3_21336	COG0673	inositol 2-dehydrogenase activity
VEJY3_21341	COG1082	Xylose isomerase domain protein TIM barrel
VEJY3_21351	COG4977	sequence-specific DNA binding
VEJY3_21351	COG1917	Cupin 2, conserved barrel domain protein
VEJY3_21361	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
VEJY3_21371	COG1070	Carbohydrate kinase
VEJY3_21406	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
VEJY3_21421	COG2207	Transcriptional regulator
VEJY3_21426	COG1621	beta-fructofuranosidase activity
VEJY3_21431	COG4172	Belongs to the ABC transporter superfamily
VEJY3_21441	COG0601	transmembrane transport
VEJY3_21446	COG0747	negative chemotaxis
VEJY3_21456	COG2211	Major facilitator Superfamily
VEJY3_21466	COG2207	Transcriptional regulator
VEJY3_21486	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
VEJY3_21491	COG1979	alcohol dehydrogenase
VEJY3_21496	COG1064	alcohol dehydrogenase
VEJY3_21511	COG1760	l-serine dehydratase
VEJY3_21526	COG0446	pyridine nucleotide-disulphide oxidoreductase
VEJY3_21526	COG0404	The glycine cleavage system catalyzes the degradation of glycine
VEJY3_21541	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
VEJY3_21546	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
VEJY3_21546	COG1017	nitric oxide dioxygenase activity
VEJY3_21556	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
VEJY3_21576	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
VEJY3_21581	COG1012	belongs to the aldehyde dehydrogenase family
VEJY3_21621	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
VEJY3_21626	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
VEJY3_21626	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
VEJY3_21636	COG0356	it plays a direct role in the translocation of protons across the membrane
VEJY3_21651	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
VEJY3_21656	COG0656	L-ascorbic acid biosynthetic process
VEJY3_21666	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
VEJY3_21676	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
VEJY3_21681	COG0247	lactate metabolic process
VEJY3_21681	COG2181	nitrate reductase activity
VEJY3_21686	COG1902	pentaerythritol trinitrate reductase activity
VEJY3_21686	COG0446	pyridine nucleotide-disulphide oxidoreductase
VEJY3_21711	COG1454	alcohol dehydrogenase
VEJY3_21731	COG1119	ATPase activity
VEJY3_21736	COG2200	EAL domain
VEJY3_21751	COG0513	Belongs to the DEAD box helicase family
VEJY3_21756	COG0523	cobalamin synthesis protein
VEJY3_21761	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
VEJY3_21771	COG0133	tryptophan synthase activity
VEJY3_21776	COG3530	Putative quorum-sensing-regulated virulence factor
VEJY3_21801	COG3186	Phenylalanine-4-hydroxylase
VEJY3_21806	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
VEJY3_21811	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
VEJY3_21831	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
VEJY3_21836	COG1454	alcohol dehydrogenase
VEJY3_21841	COG2133	pyrroloquinoline quinone binding
VEJY3_21851	COG0783	Belongs to the Dps family
VEJY3_21856	COG0840	transmembrane signaling receptor activity
VEJY3_21866	COG1136	(ABC) transporter
VEJY3_21866	COG0577	efflux transmembrane transporter activity
VEJY3_21891	COG1278	Cold shock
VEJY3_21921	COG0545	Peptidyl-prolyl cis-trans isomerase
VEJY3_21926	COG0109	protoheme IX farnesyltransferase activity
VEJY3_21931	COG1612	heme a metabolic process
VEJY3_21956	COG3175	Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I
VEJY3_21971	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
VEJY3_21976	COG1280	lysine exporter protein (LysE YggA)
VEJY3_21996	COG0179	Fumarylacetoacetate (FAA) hydrolase
VEJY3_22021	COG0583	DNA-binding transcription factor activity
VEJY3_22026	COG5001	Diguanylate cyclase
VEJY3_22031	COG0739	heme binding
VEJY3_22066	COG0814	amino acid
VEJY3_22096	COG0798	PFAM Bile acid sodium symporter
VEJY3_22111	COG1131	(ABC) transporter
VEJY3_22116	COG0842	Transport permease protein
VEJY3_22126	COG3383	formate dehydrogenase (NAD+) activity
VEJY3_22141	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
VEJY3_22151	COG2871	sodium ion transport
VEJY3_22161	COG3706	GGDEF domain
VEJY3_22171	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
VEJY3_22176	COG2067	long-chain fatty acid transport protein
VEJY3_22181	COG0589	response to stress
VEJY3_22186	COG1028	Short-chain dehydrogenase reductase Sdr
VEJY3_22191	COG2731	YhcH YjgK YiaL family protein
VEJY3_22211	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
VEJY3_22216	COG1454	alcohol dehydrogenase
VEJY3_22221	COG3395	kinase activity
VEJY3_22226	COG1995	Catalyzes the NAD(P)-dependent oxidation of 4- (phosphohydroxy)-L-threonine (HTP) into 2-amino-3-oxo-4- (phosphohydroxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP)
VEJY3_22231	COG1349	DNA-binding transcription factor activity
VEJY3_22236	COG2249	NAD(P)H dehydrogenase (quinone) activity
VEJY3_22261	COG0366	Alpha amylase catalytic
VEJY3_22266	COG1979	alcohol dehydrogenase
VEJY3_22281	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
VEJY3_22291	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
VEJY3_22301	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
VEJY3_22326	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
VEJY3_22336	COG4948	Mandelate Racemase Muconate Lactonizing
VEJY3_22341	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
VEJY3_22356	COG1902	pentaerythritol trinitrate reductase activity
VEJY3_22361	COG0583	DNA-binding transcription factor activity
VEJY3_22366	COG1063	alcohol dehydrogenase
VEJY3_22381	COG1807	4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family
VEJY3_22396	COG1403	HNH endonuclease
VEJY3_22401	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
VEJY3_22406	COG0835	chemotaxis
VEJY3_22406	COG0784	Response regulator, receiver
VEJY3_22411	COG0748	coenzyme F420 binding
VEJY3_22446	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
VEJY3_22451	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
VEJY3_22456	COG3217	Mosc domain protein beta barrel domain protein
VEJY3_22456	COG0633	Ferredoxin
VEJY3_22456	COG0633	Ferredoxin
VEJY3_22456	COG3217	Mosc domain protein beta barrel domain protein
VEJY3_22466	COG0418	dihydroorotase activity
VEJY3_22471	COG2354	Protein conserved in bacteria
VEJY3_22481	COG2176	DNA-directed DNA polymerase activity
VEJY3_22496	COG1132	(ABC) transporter
VEJY3_22501	COG1757	Na H antiporter
VEJY3_22521	COG2378	regulation of single-species biofilm formation
VEJY3_22526	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
VEJY3_22546	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
VEJY3_22576	COG2211	Major facilitator Superfamily
VEJY3_22586	COG4580	involved in the transport of maltose and maltodextrins
VEJY3_22596	COG3250	beta-galactosidase activity
VEJY3_22601	COG1609	Transcriptional regulator
VEJY3_22606	COG1609	Transcriptional regulator
VEJY3_22611	COG2017	converts alpha-aldose to the beta-anomer
VEJY3_22631	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
VEJY3_22641	COG3344	reverse transcriptase
VEJY3_22646	COG3264	Mechanosensitive ion channel
VEJY3_22646	COG3096	Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division
VEJY3_22661	COG1127	ABC transporter
VEJY3_22666	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
VEJY3_22676	COG0583	DNA-binding transcription factor activity
VEJY3_22686	COG2801	Transposase and inactivated derivatives
VEJY3_22706	COG1982	Orn Lys Arg decarboxylase major
VEJY3_22711	COG1982	Orn Lys Arg decarboxylase major
VEJY3_22716	COG0531	amino acid
VEJY3_22726	COG0531	amino acid
VEJY3_22761	COG1609	Transcriptional regulator
VEJY3_22776	COG2814	Major facilitator Superfamily
VEJY3_22786	COG1760	l-serine dehydratase
VEJY3_22801	COG1175	transmembrane transport
VEJY3_22806	COG1653	transport
VEJY3_22811	COG3842	ATPase activity
VEJY3_22821	COG1263	PTS System
VEJY3_22821	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
VEJY3_22826	COG1486	melibiose metabolic process
VEJY3_22861	COG1609	Transcriptional regulator
VEJY3_22876	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
VEJY3_22896	COG1278	Cold shock
VEJY3_22916	COG0330	HflC and HflK could
VEJY3_22951	COG1061	Type III restriction enzyme res subunit
VEJY3_22991	COG3706	GGDEF domain
VEJY3_22996	COG0071	Belongs to the small heat shock protein (HSP20) family
VEJY3_23021	COG1448	Aminotransferase
VEJY3_23031	COG1522	sequence-specific DNA binding
VEJY3_23061	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
VEJY3_23066	COG3437	response regulator, receiver
VEJY3_23071	COG2205	protein histidine kinase activity
VEJY3_23071	COG3437	response regulator, receiver
VEJY3_23071	COG3850	Histidine kinase
VEJY3_23071	COG4999	Histidine kinase
VEJY3_23086	COG3833	ABC-type maltose transport systems, permease component
VEJY3_23091	COG1175	transmembrane transport
VEJY3_23101	COG3842	ATPase activity
VEJY3_23106	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
VEJY3_23131	COG0438	transferase activity, transferring glycosyl groups
VEJY3_23166	COG1309	transcriptional regulator
VEJY3_23171	COG2130	NADP-dependent
VEJY3_23181	COG2084	Dehydrogenase
VEJY3_23186	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
VEJY3_23191	COG3241	Transfers electrons from cytochrome c551 to cytochrome oxidase
VEJY3_23201	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
VEJY3_23221	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
VEJY3_23226	COG0583	DNA-binding transcription factor activity
VEJY3_23231	COG1132	(ABC) transporter
VEJY3_23236	COG4774	siderophore transport
VEJY3_23241	COG1120	ATPase activity
VEJY3_23246	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
VEJY3_23261	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
VEJY3_23281	COG2197	response regulator
VEJY3_23291	COG0714	Associated with various cellular activities
VEJY3_23311	COG2304	oxidoreductase activity
VEJY3_23321	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
VEJY3_23326	COG0581	inorganic phosphate transmembrane transporter activity
VEJY3_23331	COG0573	inorganic phosphate transmembrane transporter activity
VEJY3_23336	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
VEJY3_23341	COG0840	transmembrane signaling receptor activity
VEJY3_23346	COG0513	Belongs to the DEAD box helicase family
VEJY3_23356	COG1388	LysM domain
VEJY3_23356	COG1376	ErfK ybiS ycfS ynhG family protein
VEJY3_23361	COG0415	Belongs to the DNA photolyase family
VEJY3_23366	COG0789	Transcriptional regulator
VEJY3_23371	COG3272	Protein of unknown function (DUF1722)
VEJY3_23376	COG0813	purine-nucleoside phosphorylase activity
VEJY3_23391	COG3706	GGDEF domain
VEJY3_23401	COG1566	PFAM secretion protein HlyD family protein
VEJY3_23406	COG4720	Psort location CytoplasmicMembrane, score
VEJY3_23416	COG0348	domain, Protein
VEJY3_23421	COG0437	4 iron, 4 sulfur cluster binding
VEJY3_23426	COG1247	-acetyltransferase
VEJY3_23446	COG1067	ATP-dependent peptidase activity
VEJY3_23456	COG1505	serine-type exopeptidase activity
VEJY3_23461	COG0583	DNA-binding transcription factor activity
VEJY3_23466	COG1620	l-lactate permease
VEJY3_23471	COG1304	FMN binding
VEJY3_23481	COG0668	transmembrane transport
VEJY3_23496	COG1278	Cold shock
VEJY3_23506	COG1063	alcohol dehydrogenase
VEJY3_23511	COG0156	8-amino-7-oxononanoate synthase activity
VEJY3_23516	COG3300	MHYT domain
VEJY3_23516	COG5001	Diguanylate cyclase
VEJY3_23541	COG0745	RESPONSE REGULATOR receiver
VEJY3_23561	COG0346	lactoylglutathione lyase activity
VEJY3_23606	COG1566	PFAM secretion protein HlyD family protein
VEJY3_23616	COG0628	permease
VEJY3_23621	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
VEJY3_23626	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
VEJY3_23636	COG4628	conserved protein (DUF2132)
VEJY3_23641	COG1686	Belongs to the peptidase S11 family
VEJY3_23661	COG4667	esterase of the alpha-beta hydrolase superfamily
VEJY3_23666	COG2095	MarC family integral membrane protein
VEJY3_23681	COG1301	dicarboxylic acid transport
VEJY3_23686	COG3339	Conserved Protein
VEJY3_23691	COG0366	Alpha amylase catalytic
VEJY3_23696	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
VEJY3_23701	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
VEJY3_23706	COG1640	4-alpha-glucanotransferase
VEJY3_23711	COG0058	SHG alpha-glucan phosphorylase activity
VEJY3_23716	COG2909	trisaccharide binding
VEJY3_23731	COG1999	signal sequence binding
VEJY3_23736	COG1263	PTS System
VEJY3_23736	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
VEJY3_23741	COG1162	GTPase activity
VEJY3_23746	COG3633	Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system)
VEJY3_23751	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
VEJY3_23766	COG0366	Alpha amylase catalytic
VEJY3_23796	COG1263	PTS System
VEJY3_23796	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
VEJY3_23806	COG2814	Major facilitator Superfamily
VEJY3_23811	COG4771	TonB-dependent receptor
VEJY3_23816	COG0583	DNA-binding transcription factor activity
VEJY3_23821	COG4607	ABC-type enterochelin transport system periplasmic component
VEJY3_23826	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
VEJY3_23831	COG4605	iron ion homeostasis
VEJY3_23836	COG4604	ABC transporter, ATP-binding protein
VEJY3_23856	COG3033	Beta-eliminating lyase
VEJY3_23861	COG0814	amino acid
VEJY3_23876	COG3171	Protein conserved in bacteria
VEJY3_23891	COG2076	Multidrug Resistance protein
VEJY3_23896	COG0583	DNA-binding transcription factor activity
VEJY3_23926	COG0583	DNA-binding transcription factor activity
VEJY3_23931	COG0662	Cupin 2, conserved barrel domain protein
VEJY3_23951	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
VEJY3_23956	COG0251	oxidation-reduction process
VEJY3_23961	COG2423	ornithine cyclodeaminase activity
VEJY3_23966	COG2207	Transcriptional regulator
VEJY3_23996	COG1621	beta-fructofuranosidase activity
VEJY3_24006	COG0376	Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity
VEJY3_24016	COG0612	Peptidase, M16
VEJY3_24021	COG5492	domain, Protein
VEJY3_24026	COG5426	von Willebrand factor, type A
VEJY3_24036	COG1085	galactose-1-phosphate uridylyltransferase
VEJY3_24041	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
VEJY3_24046	COG0659	secondary active sulfate transmembrane transporter activity
VEJY3_24056	COG1940	carbohydrate kinase activity
VEJY3_24071	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
VEJY3_24081	COG0747	negative chemotaxis
VEJY3_24091	COG0641	radical SAM
VEJY3_24096	COG3119	arylsulfatase activity
VEJY3_24101	COG3119	arylsulfatase activity
VEJY3_24106	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
VEJY3_24111	COG4772	TonB-dependent receptor
VEJY3_24121	COG1172	Belongs to the binding-protein-dependent transport system permease family
VEJY3_24126	COG1129	ABC transporter
VEJY3_24131	COG1879	ABC-type sugar transport system periplasmic component
VEJY3_24136	COG1069	ribulokinase activity
VEJY3_24146	COG2160	L-arabinose isomerase activity
VEJY3_24156	COG2017	converts alpha-aldose to the beta-anomer
VEJY3_24161	COG3940	Belongs to the glycosyl hydrolase 43 family
VEJY3_24166	COG2211	Major facilitator Superfamily
VEJY3_24176	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
VEJY3_24181	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
VEJY3_24186	COG4521	taurine ABC transporter
VEJY3_24191	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
VEJY3_24196	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
VEJY3_24206	COG4221	oxidoreductase activity
VEJY3_24211	COG1136	(ABC) transporter
VEJY3_24231	COG1764	response to oxidative stress
VEJY3_24236	COG1846	Transcriptional regulator
VEJY3_24241	COG0450	alkyl hydroperoxide reductase
VEJY3_24246	COG3634	alkyl hydroperoxide reductase activity
VEJY3_24251	COG3119	arylsulfatase activity
VEJY3_24281	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
VEJY3_24311	COG0259	pyridoxamine-phosphate oxidase activity
VEJY3_24371	COG1444	tRNA N-acetyltransferase activity